Query 005001
Match_columns 720
No_of_seqs 607 out of 5250
Neff 9.2
Searched_HMMs 46136
Date Thu Mar 28 16:26:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005001.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005001hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 6.4E-61 1.4E-65 580.9 43.4 540 85-695 406-957 (968)
2 KOG1187 Serine/threonine prote 100.0 9.5E-50 2.1E-54 421.5 25.5 291 396-691 61-354 (361)
3 KOG0581 Mitogen-activated prot 100.0 1.5E-48 3.3E-53 388.1 19.7 259 411-693 80-341 (364)
4 KOG0192 Tyrosine kinase specif 100.0 3.5E-47 7.5E-52 398.7 25.5 263 414-698 45-312 (362)
5 KOG0615 Serine/threonine prote 100.0 8.6E-48 1.9E-52 384.5 14.5 254 408-685 170-437 (475)
6 KOG0197 Tyrosine kinases [Sign 100.0 3.1E-47 6.8E-52 396.4 18.2 260 408-692 204-464 (468)
7 KOG0591 NIMA (never in mitosis 100.0 8.4E-48 1.8E-52 366.1 11.8 260 410-688 19-284 (375)
8 KOG0575 Polo-like serine/threo 100.0 1.7E-46 3.6E-51 394.3 20.5 250 410-685 18-269 (592)
9 KOG0595 Serine/threonine-prote 100.0 9.2E-46 2E-50 370.9 20.2 251 409-683 9-266 (429)
10 KOG1026 Nerve growth factor re 100.0 4.8E-45 1E-49 397.9 22.1 264 409-693 485-766 (774)
11 KOG0598 Ribosomal protein S6 k 100.0 2.2E-45 4.8E-50 365.5 17.5 251 409-684 24-280 (357)
12 KOG0593 Predicted protein kina 100.0 1.4E-45 3E-50 354.4 14.5 268 410-685 2-284 (396)
13 KOG0659 Cdk activating kinase 100.0 7.7E-44 1.7E-48 337.1 19.2 267 410-685 2-281 (318)
14 KOG0196 Tyrosine kinase, EPH ( 100.0 4.7E-44 1E-48 381.6 18.3 275 411-709 630-911 (996)
15 KOG0600 Cdc2-related protein k 100.0 1.3E-43 2.8E-48 363.2 18.1 270 408-685 115-400 (560)
16 KOG0661 MAPK related serine/th 100.0 2.9E-44 6.2E-49 365.4 12.4 269 408-686 8-292 (538)
17 KOG0592 3-phosphoinositide-dep 100.0 3.9E-43 8.5E-48 362.5 16.6 253 409-686 72-339 (604)
18 KOG0578 p21-activated serine/t 100.0 4.4E-43 9.5E-48 365.7 16.7 252 408-685 271-523 (550)
19 KOG0582 Ste20-like serine/thre 100.0 1.6E-42 3.4E-47 350.0 20.2 264 408-685 24-293 (516)
20 KOG0198 MEKK and related serin 100.0 6.4E-43 1.4E-47 355.1 17.4 256 410-688 17-279 (313)
21 KOG0616 cAMP-dependent protein 100.0 2.1E-42 4.5E-47 332.1 17.2 238 410-676 44-283 (355)
22 KOG0193 Serine/threonine prote 100.0 1.2E-41 2.7E-46 355.5 21.6 269 402-692 384-656 (678)
23 KOG1094 Discoidin domain recep 100.0 1.5E-41 3.3E-46 351.5 21.6 265 406-689 534-804 (807)
24 KOG1095 Protein tyrosine kinas 100.0 5.8E-42 1.3E-46 387.2 20.0 263 410-693 692-965 (1025)
25 KOG0597 Serine-threonine prote 100.0 2.9E-42 6.2E-47 355.7 16.0 249 410-685 2-251 (808)
26 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.2E-41 4.7E-46 361.6 22.9 265 408-692 5-337 (338)
27 KOG0605 NDR and related serine 100.0 1.3E-41 2.8E-46 351.8 18.5 255 408-685 139-445 (550)
28 KOG0583 Serine/threonine prote 100.0 2.8E-41 6.2E-46 357.7 21.3 251 408-684 15-274 (370)
29 KOG4721 Serine/threonine prote 100.0 2.8E-42 6.1E-47 355.4 12.0 242 411-687 125-366 (904)
30 KOG0201 Serine/threonine prote 100.0 1.3E-42 2.8E-47 350.8 9.1 250 410-685 13-263 (467)
31 KOG0588 Serine/threonine prote 100.0 2.2E-41 4.8E-46 356.4 16.2 250 410-686 12-264 (786)
32 KOG0694 Serine/threonine prote 100.0 5.1E-41 1.1E-45 356.8 18.8 246 407-679 365-613 (694)
33 KOG0585 Ca2+/calmodulin-depend 100.0 4.6E-41 1E-45 341.4 17.1 265 400-687 87-374 (576)
34 KOG0194 Protein tyrosine kinas 100.0 6.2E-41 1.3E-45 355.3 18.8 263 408-694 155-425 (474)
35 KOG0663 Protein kinase PITSLRE 100.0 2.8E-41 6E-46 329.0 14.7 269 409-685 75-361 (419)
36 cd07848 STKc_CDKL5 Catalytic d 100.0 3E-40 6.6E-45 344.3 23.1 269 410-685 1-284 (287)
37 PHA02988 hypothetical protein; 100.0 8.2E-40 1.8E-44 339.9 24.6 247 416-689 26-279 (283)
38 cd05064 PTKc_EphR_A10 Catalyti 100.0 7.1E-40 1.5E-44 337.6 23.8 257 409-689 4-265 (266)
39 KOG0589 Serine/threonine prote 100.0 1.1E-40 2.3E-45 346.8 17.4 253 410-685 4-258 (426)
40 KOG0580 Serine/threonine prote 100.0 8E-41 1.7E-45 312.3 13.5 252 408-685 20-273 (281)
41 KOG0660 Mitogen-activated prot 100.0 2.1E-40 4.5E-45 328.6 15.9 268 408-685 20-310 (359)
42 cd05104 PTKc_Kit Catalytic dom 100.0 1.2E-39 2.6E-44 352.2 22.5 262 408-689 33-374 (375)
43 KOG0611 Predicted serine/threo 100.0 2.2E-40 4.8E-45 329.0 15.1 251 408-686 51-304 (668)
44 KOG0610 Putative serine/threon 100.0 1.4E-39 2.9E-44 326.5 20.7 255 410-685 77-392 (459)
45 cd06649 PKc_MEK2 Catalytic dom 100.0 2.9E-39 6.2E-44 343.9 24.4 268 409-686 4-302 (331)
46 KOG2345 Serine/threonine prote 100.0 1.7E-40 3.7E-45 311.3 12.9 266 407-690 18-301 (302)
47 cd05096 PTKc_DDR1 Catalytic do 100.0 3.5E-39 7.6E-44 339.2 24.4 265 409-687 4-303 (304)
48 cd05106 PTKc_CSF-1R Catalytic 100.0 1.5E-39 3.3E-44 351.1 22.1 265 406-690 34-373 (374)
49 KOG3653 Transforming growth fa 100.0 2.9E-38 6.4E-43 321.3 29.9 272 413-695 213-509 (534)
50 cd05631 STKc_GRK4 Catalytic do 100.0 1.9E-39 4.1E-44 337.9 21.6 253 412-685 2-261 (285)
51 cd05612 STKc_PRKX_like Catalyt 100.0 1.2E-39 2.5E-44 340.5 19.7 247 410-685 1-254 (291)
52 KOG0658 Glycogen synthase kina 100.0 1.4E-40 2.9E-45 330.5 11.9 265 409-685 23-306 (364)
53 cd05571 STKc_PKB Catalytic dom 100.0 1.3E-39 2.9E-44 345.2 19.6 244 416-685 1-251 (323)
54 cd05114 PTKc_Tec_Rlk Catalytic 100.0 7.3E-39 1.6E-43 328.0 23.8 251 410-686 4-255 (256)
55 KOG0033 Ca2+/calmodulin-depend 100.0 2.7E-41 5.9E-46 315.3 5.1 252 409-685 10-267 (355)
56 KOG4257 Focal adhesion tyrosin 100.0 1.1E-39 2.4E-44 339.4 17.5 263 405-692 384-652 (974)
57 cd05072 PTKc_Lyn Catalytic dom 100.0 5.1E-39 1.1E-43 330.2 22.1 255 409-688 5-260 (261)
58 PTZ00263 protein kinase A cata 100.0 1.7E-39 3.7E-44 345.1 19.1 247 410-685 18-271 (329)
59 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.6E-39 5.6E-44 344.7 20.2 255 410-685 1-257 (333)
60 KOG4278 Protein tyrosine kinas 100.0 1.2E-39 2.6E-44 338.4 16.9 268 403-695 260-529 (1157)
61 cd05048 PTKc_Ror Catalytic Dom 100.0 1.1E-38 2.3E-43 331.9 23.6 258 410-688 5-282 (283)
62 cd05068 PTKc_Frk_like Catalyti 100.0 1.3E-38 2.7E-43 327.3 23.3 255 409-688 5-260 (261)
63 cd05033 PTKc_EphR Catalytic do 100.0 2.4E-38 5.2E-43 326.2 24.9 256 410-689 4-265 (266)
64 cd05052 PTKc_Abl Catalytic dom 100.0 2.1E-38 4.6E-43 326.0 24.2 255 410-689 6-262 (263)
65 cd08228 STKc_Nek6 Catalytic do 100.0 3E-38 6.4E-43 325.6 25.3 262 410-689 2-265 (267)
66 PTZ00283 serine/threonine prot 100.0 6.2E-39 1.3E-43 357.2 21.6 260 406-685 28-297 (496)
67 PTZ00426 cAMP-dependent protei 100.0 4.9E-39 1.1E-43 342.5 19.7 248 409-685 29-284 (340)
68 cd05054 PTKc_VEGFR Catalytic d 100.0 1.2E-38 2.7E-43 339.3 22.8 266 407-692 4-336 (337)
69 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.2E-38 2.6E-43 345.4 23.0 265 407-691 34-399 (400)
70 cd05573 STKc_ROCK_NDR_like Cat 100.0 3.6E-39 7.9E-44 346.2 18.8 252 410-685 1-285 (350)
71 KOG0594 Protein kinase PCTAIRE 100.0 5E-39 1.1E-43 320.3 18.2 271 410-685 11-302 (323)
72 KOG2052 Activin A type IB rece 100.0 7E-38 1.5E-42 316.3 26.3 263 406-691 207-505 (513)
73 cd05595 STKc_PKB_beta Catalyti 100.0 8.7E-39 1.9E-43 338.8 20.5 244 416-685 1-251 (323)
74 cd06650 PKc_MEK1 Catalytic dom 100.0 2.8E-38 6.1E-43 336.3 24.2 267 409-685 4-299 (333)
75 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.5E-38 3.3E-43 326.6 21.2 257 407-688 3-260 (261)
76 cd05593 STKc_PKB_gamma Catalyt 100.0 1E-38 2.3E-43 338.9 20.5 244 416-685 1-251 (328)
77 PTZ00267 NIMA-related protein 100.0 1.7E-38 3.6E-43 353.6 22.9 253 411-685 68-323 (478)
78 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.2E-38 2.7E-43 340.3 21.0 267 411-685 1-290 (338)
79 cd05113 PTKc_Btk_Bmx Catalytic 100.0 2.5E-38 5.5E-43 324.1 22.4 252 410-687 4-256 (256)
80 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.5E-38 3.3E-43 331.6 21.0 267 410-685 5-285 (288)
81 cd05108 PTKc_EGFR Catalytic do 100.0 3.2E-38 7E-43 333.7 23.8 259 410-693 7-272 (316)
82 cd05614 STKc_MSK2_N N-terminal 100.0 1.2E-38 2.7E-43 339.4 20.3 254 411-685 1-267 (332)
83 cd05596 STKc_ROCK Catalytic do 100.0 9.9E-39 2.1E-43 344.4 19.6 254 408-685 41-304 (370)
84 cd05585 STKc_YPK1_like Catalyt 100.0 1.2E-38 2.7E-43 336.2 19.9 242 418-685 1-247 (312)
85 cd05062 PTKc_IGF-1R Catalytic 100.0 3.4E-38 7.4E-43 327.1 22.6 259 408-687 4-276 (277)
86 cd05049 PTKc_Trk Catalytic dom 100.0 4.1E-38 8.9E-43 326.9 23.1 257 410-687 5-279 (280)
87 PF07714 Pkinase_Tyr: Protein 100.0 9.1E-39 2E-43 327.8 18.0 250 414-686 3-259 (259)
88 cd05621 STKc_ROCK2 Catalytic d 100.0 1.2E-38 2.5E-43 343.5 19.6 256 406-685 39-304 (370)
89 cd05059 PTKc_Tec_like Catalyti 100.0 3.5E-38 7.5E-43 323.0 22.2 251 410-686 4-255 (256)
90 cd05071 PTKc_Src Catalytic dom 100.0 6.5E-38 1.4E-42 322.2 24.2 255 409-689 5-260 (262)
91 cd07862 STKc_CDK6 Catalytic do 100.0 2.3E-38 5E-43 330.7 21.1 268 410-685 1-287 (290)
92 cd05045 PTKc_RET Catalytic dom 100.0 7.7E-38 1.7E-42 326.7 24.8 261 411-692 1-289 (290)
93 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4.4E-38 9.6E-43 330.7 22.9 268 409-685 4-288 (303)
94 cd05601 STKc_CRIK Catalytic do 100.0 8.2E-39 1.8E-43 340.5 17.5 253 410-685 1-263 (330)
95 cd05584 STKc_p70S6K Catalytic 100.0 2.2E-38 4.8E-43 335.9 20.6 244 416-685 2-256 (323)
96 cd05589 STKc_PKN Catalytic dom 100.0 2.6E-38 5.7E-43 335.5 21.1 247 412-685 1-257 (324)
97 cd05053 PTKc_FGFR Catalytic do 100.0 5.1E-38 1.1E-42 328.6 22.9 264 406-690 8-292 (293)
98 PLN00034 mitogen-activated pro 100.0 3.4E-38 7.4E-43 338.7 22.1 249 410-685 74-328 (353)
99 cd05067 PTKc_Lck_Blk Catalytic 100.0 4.8E-38 1E-42 322.8 22.2 255 408-688 4-259 (260)
100 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.6E-37 3.4E-42 320.1 25.8 261 410-689 2-265 (267)
101 cd05116 PTKc_Syk Catalytic dom 100.0 9.4E-38 2E-42 320.1 23.9 247 417-688 2-254 (257)
102 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 6.7E-38 1.5E-42 321.7 22.9 254 409-688 5-259 (260)
103 cd08229 STKc_Nek7 Catalytic do 100.0 1E-37 2.2E-42 321.6 24.2 262 410-689 2-265 (267)
104 cd05043 PTK_Ryk Pseudokinase d 100.0 9.4E-38 2E-42 324.3 24.1 264 408-692 4-279 (280)
105 cd05075 PTKc_Axl Catalytic dom 100.0 1.2E-37 2.5E-42 322.1 24.6 257 413-689 2-271 (272)
106 cd05608 STKc_GRK1 Catalytic do 100.0 4.3E-38 9.3E-43 326.8 21.3 250 418-685 1-257 (280)
107 KOG1989 ARK protein kinase fam 100.0 1.8E-38 3.9E-43 348.4 19.3 262 408-694 35-316 (738)
108 cd05599 STKc_NDR_like Catalyti 100.0 2.1E-38 4.5E-43 342.1 19.6 252 410-685 1-296 (364)
109 KOG0577 Serine/threonine prote 100.0 2.9E-39 6.2E-44 334.5 12.1 249 409-685 25-278 (948)
110 PHA03212 serine/threonine kina 100.0 2.8E-38 6.1E-43 342.4 20.5 261 409-685 91-376 (391)
111 cd05626 STKc_LATS2 Catalytic d 100.0 3.7E-38 8.1E-43 341.8 21.5 252 411-685 2-305 (381)
112 cd05093 PTKc_TrkB Catalytic do 100.0 1.3E-37 2.8E-42 324.7 24.7 262 409-692 4-282 (288)
113 cd05035 PTKc_Axl_like Catalyti 100.0 1.3E-37 2.8E-42 321.8 24.5 258 412-689 1-272 (273)
114 cd05594 STKc_PKB_alpha Catalyt 100.0 1.5E-38 3.2E-43 337.6 17.9 244 416-685 1-252 (325)
115 cd05094 PTKc_TrkC Catalytic do 100.0 1.5E-37 3.2E-42 324.7 25.1 262 410-693 5-286 (291)
116 cd05089 PTKc_Tie1 Catalytic do 100.0 1.7E-37 3.6E-42 325.3 25.5 263 410-695 2-281 (297)
117 cd05107 PTKc_PDGFR_beta Cataly 100.0 6.9E-38 1.5E-42 339.3 23.1 265 406-690 33-400 (401)
118 cd07853 STKc_NLK Catalytic dom 100.0 8E-38 1.7E-42 338.3 23.4 267 411-685 1-288 (372)
119 KOG1025 Epidermal growth facto 100.0 4.9E-38 1.1E-42 336.5 20.7 256 412-692 698-960 (1177)
120 cd05628 STKc_NDR1 Catalytic do 100.0 5.4E-38 1.2E-42 338.4 21.4 253 410-685 1-293 (363)
121 cd05084 PTKc_Fes Catalytic dom 100.0 1.5E-37 3.3E-42 317.5 23.4 247 417-687 2-251 (252)
122 cd05085 PTKc_Fer Catalytic dom 100.0 2.4E-37 5.2E-42 315.5 24.8 247 417-687 2-249 (250)
123 cd05590 STKc_nPKC_eta Catalyti 100.0 4.3E-38 9.3E-43 333.1 20.0 244 416-685 1-253 (320)
124 cd05069 PTKc_Yes Catalytic dom 100.0 2E-37 4.4E-42 318.2 24.3 253 410-688 6-259 (260)
125 cd05629 STKc_NDR_like_fungal C 100.0 3.4E-38 7.3E-43 341.9 19.4 252 410-685 1-305 (377)
126 cd05088 PTKc_Tie2 Catalytic do 100.0 1.5E-37 3.3E-42 326.4 23.9 262 410-694 7-285 (303)
127 cd05582 STKc_RSK_N N-terminal 100.0 1.5E-38 3.3E-43 336.5 16.2 240 416-681 2-245 (318)
128 cd05034 PTKc_Src_like Catalyti 100.0 1.2E-37 2.6E-42 319.9 22.4 256 408-688 4-260 (261)
129 cd05111 PTK_HER3 Pseudokinase 100.0 2.4E-37 5.3E-42 321.0 24.9 257 410-691 7-270 (279)
130 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.6E-37 3.5E-42 327.0 23.9 265 409-694 17-304 (307)
131 cd05592 STKc_nPKC_theta_delta 100.0 6.8E-38 1.5E-42 331.0 21.0 243 416-684 1-247 (316)
132 cd06625 STKc_MEKK3_like Cataly 100.0 1.8E-37 3.9E-42 319.0 23.5 253 410-685 2-260 (263)
133 cd05090 PTKc_Ror1 Catalytic do 100.0 1.7E-37 3.7E-42 322.9 23.4 258 410-688 5-282 (283)
134 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.8E-37 3.9E-42 322.7 23.6 268 412-690 6-282 (283)
135 cd05101 PTKc_FGFR2 Catalytic d 100.0 2.1E-37 4.5E-42 325.7 24.3 265 407-692 12-299 (304)
136 cd05605 STKc_GRK4_like Catalyt 100.0 8.9E-38 1.9E-42 325.3 21.2 254 411-685 1-261 (285)
137 cd08529 STKc_FA2-like Catalyti 100.0 2.1E-37 4.5E-42 317.1 23.6 252 411-685 1-253 (256)
138 KOG0574 STE20-like serine/thre 100.0 8.3E-40 1.8E-44 313.4 5.1 248 412-685 35-283 (502)
139 cd05587 STKc_cPKC Catalytic do 100.0 6.9E-38 1.5E-42 332.3 20.4 249 411-685 1-257 (324)
140 KOG4717 Serine/threonine prote 100.0 3.8E-38 8.3E-43 321.4 17.5 250 409-684 17-269 (864)
141 cd05055 PTKc_PDGFR Catalytic d 100.0 2.2E-37 4.8E-42 325.1 23.9 260 408-689 33-301 (302)
142 cd05622 STKc_ROCK1 Catalytic d 100.0 7E-38 1.5E-42 337.8 20.5 259 404-686 37-305 (371)
143 cd05620 STKc_nPKC_delta Cataly 100.0 8.1E-38 1.8E-42 330.4 20.4 242 416-683 1-246 (316)
144 cd05036 PTKc_ALK_LTK Catalytic 100.0 2E-37 4.3E-42 321.3 22.9 258 409-687 5-276 (277)
145 PTZ00036 glycogen synthase kin 100.0 6.4E-38 1.4E-42 345.0 20.2 265 409-685 65-351 (440)
146 cd05032 PTKc_InsR_like Catalyt 100.0 1.4E-37 3.1E-42 322.3 21.5 258 409-687 5-276 (277)
147 cd05618 STKc_aPKC_iota Catalyt 100.0 1E-37 2.2E-42 331.4 20.9 252 416-685 1-262 (329)
148 cd05591 STKc_nPKC_epsilon Cata 100.0 6.4E-38 1.4E-42 332.1 19.2 244 416-685 1-254 (321)
149 cd05625 STKc_LATS1 Catalytic d 100.0 6.4E-38 1.4E-42 340.4 19.7 251 411-685 2-305 (382)
150 cd05063 PTKc_EphR_A2 Catalytic 100.0 3.5E-37 7.5E-42 317.9 24.2 257 409-689 4-267 (268)
151 cd05619 STKc_nPKC_theta Cataly 100.0 1.1E-37 2.4E-42 329.2 20.8 243 416-684 1-247 (316)
152 cd05061 PTKc_InsR Catalytic do 100.0 2.8E-37 6.1E-42 322.1 23.4 263 407-690 3-279 (288)
153 cd05066 PTKc_EphR_A Catalytic 100.0 3.7E-37 8E-42 317.5 24.0 256 410-689 4-266 (267)
154 cd05588 STKc_aPKC Catalytic do 100.0 1.2E-37 2.6E-42 330.9 20.9 252 416-685 1-262 (329)
155 cd05091 PTKc_Ror2 Catalytic do 100.0 2.1E-37 4.6E-42 322.2 22.3 257 411-688 6-282 (283)
156 KOG1024 Receptor-like protein 100.0 7.9E-38 1.7E-42 310.0 17.9 269 401-690 275-556 (563)
157 cd05616 STKc_cPKC_beta Catalyt 100.0 1.1E-37 2.3E-42 330.7 20.3 249 411-685 1-257 (323)
158 cd05115 PTKc_Zap-70 Catalytic 100.0 4.8E-37 1E-41 314.8 24.4 248 417-689 2-255 (257)
159 cd05570 STKc_PKC Catalytic dom 100.0 1.3E-37 2.8E-42 329.2 20.7 244 416-685 1-252 (318)
160 cd05598 STKc_LATS Catalytic do 100.0 4.5E-38 9.7E-43 340.9 17.3 254 410-685 1-301 (376)
161 cd05099 PTKc_FGFR4 Catalytic d 100.0 5.4E-37 1.2E-41 324.1 24.9 265 408-693 10-297 (314)
162 KOG0599 Phosphorylase kinase g 100.0 1.2E-38 2.7E-43 301.8 10.7 252 409-685 16-283 (411)
163 cd05073 PTKc_Hck Catalytic dom 100.0 5E-37 1.1E-41 315.2 23.4 255 408-688 4-259 (260)
164 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 6.8E-37 1.5E-41 318.6 24.7 271 410-689 4-283 (284)
165 cd05109 PTKc_HER2 Catalytic do 100.0 6.3E-37 1.4E-41 318.0 24.2 257 410-691 7-270 (279)
166 cd05103 PTKc_VEGFR2 Catalytic 100.0 4.6E-37 1E-41 328.5 23.8 264 409-692 6-342 (343)
167 KOG0199 ACK and related non-re 100.0 4.1E-38 9E-43 331.8 15.2 251 412-686 112-369 (1039)
168 PRK13184 pknD serine/threonine 100.0 4.6E-37 1E-41 350.5 25.0 267 410-694 2-295 (932)
169 cd05607 STKc_GRK7 Catalytic do 100.0 3E-37 6.6E-42 319.9 21.5 249 418-686 1-251 (277)
170 KOG0032 Ca2+/calmodulin-depend 100.0 2.6E-37 5.6E-42 327.0 21.4 252 408-685 33-293 (382)
171 cd05597 STKc_DMPK_like Catalyt 100.0 3E-37 6.5E-42 328.2 21.8 254 410-685 1-266 (331)
172 cd05112 PTKc_Itk Catalytic dom 100.0 6.7E-37 1.4E-41 313.4 23.5 251 410-686 4-255 (256)
173 cd05624 STKc_MRCK_beta Catalyt 100.0 3.6E-37 7.9E-42 327.6 22.3 254 410-685 1-266 (331)
174 cd05602 STKc_SGK1 Catalytic do 100.0 1.6E-37 3.4E-42 329.7 19.4 242 416-683 1-245 (325)
175 cd05575 STKc_SGK Catalytic dom 100.0 1.7E-37 3.6E-42 329.2 19.5 239 416-680 1-242 (323)
176 cd05039 PTKc_Csk_like Catalyti 100.0 8.6E-37 1.9E-41 312.7 23.8 250 409-688 5-255 (256)
177 cd05060 PTKc_Syk_like Catalyti 100.0 7.8E-37 1.7E-41 313.2 23.4 248 416-689 1-255 (257)
178 cd05095 PTKc_DDR2 Catalytic do 100.0 8.7E-37 1.9E-41 319.8 24.2 265 409-687 4-295 (296)
179 cd05065 PTKc_EphR_B Catalytic 100.0 7.4E-37 1.6E-41 315.6 23.3 256 410-689 4-268 (269)
180 cd05047 PTKc_Tie Catalytic dom 100.0 1E-36 2.2E-41 314.8 24.3 251 417-690 2-269 (270)
181 cd05050 PTKc_Musk Catalytic do 100.0 5.1E-37 1.1E-41 320.2 22.1 260 408-688 3-288 (288)
182 KOG0667 Dual-specificity tyros 100.0 9.1E-38 2E-42 332.4 16.6 266 407-685 183-502 (586)
183 cd05630 STKc_GRK6 Catalytic do 100.0 3.8E-37 8.3E-42 320.5 21.1 253 412-685 2-261 (285)
184 cd07876 STKc_JNK2 Catalytic do 100.0 4.4E-37 9.5E-42 331.0 22.1 266 408-685 19-315 (359)
185 cd08219 STKc_Nek3 Catalytic do 100.0 7E-37 1.5E-41 313.1 22.4 251 411-685 1-252 (255)
186 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.1E-36 2.4E-41 317.0 24.1 271 410-689 4-283 (284)
187 cd05097 PTKc_DDR_like Catalyti 100.0 8.3E-37 1.8E-41 319.7 23.3 265 409-687 4-294 (295)
188 cd05056 PTKc_FAK Catalytic dom 100.0 1.4E-36 3.1E-41 313.7 24.5 259 409-692 5-268 (270)
189 cd05623 STKc_MRCK_alpha Cataly 100.0 7.4E-37 1.6E-41 325.5 23.0 254 410-685 1-266 (332)
190 cd05051 PTKc_DDR Catalytic dom 100.0 9.2E-37 2E-41 319.5 23.1 265 409-687 4-295 (296)
191 cd06646 STKc_MAP4K5 Catalytic 100.0 4.8E-37 1E-41 316.6 20.7 255 409-686 8-266 (267)
192 cd05615 STKc_cPKC_alpha Cataly 100.0 4E-37 8.7E-42 326.1 20.5 243 411-679 1-246 (323)
193 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.6E-36 3.6E-41 323.3 25.3 266 408-694 10-298 (334)
194 PTZ00266 NIMA-related protein 100.0 4.9E-37 1.1E-41 351.4 22.6 263 404-685 7-295 (1021)
195 cd08221 STKc_Nek9 Catalytic do 100.0 1.3E-36 2.9E-41 311.2 23.5 253 411-686 1-254 (256)
196 cd00192 PTKc Catalytic domain 100.0 1.4E-36 2.9E-41 311.7 23.5 250 416-686 1-261 (262)
197 PF00069 Pkinase: Protein kina 100.0 2.6E-37 5.7E-42 317.0 18.1 253 412-685 1-257 (260)
198 cd06615 PKc_MEK Catalytic doma 100.0 1.7E-36 3.7E-41 319.3 24.7 266 410-686 1-288 (308)
199 cd05092 PTKc_TrkA Catalytic do 100.0 1E-36 2.2E-41 316.5 22.7 256 410-687 5-279 (280)
200 cd05617 STKc_aPKC_zeta Catalyt 100.0 4.2E-37 9.2E-42 326.5 20.2 251 416-685 1-260 (327)
201 cd05040 PTKc_Ack_like Catalyti 100.0 1.5E-36 3.2E-41 311.1 23.4 249 416-687 1-256 (257)
202 cd05603 STKc_SGK2 Catalytic do 100.0 4.1E-37 8.8E-42 326.0 19.6 239 416-680 1-242 (321)
203 cd05082 PTKc_Csk Catalytic dom 100.0 1.4E-36 3E-41 311.2 22.7 248 410-688 6-255 (256)
204 cd05627 STKc_NDR2 Catalytic do 100.0 2.2E-37 4.8E-42 333.3 17.6 252 410-685 1-293 (360)
205 cd05058 PTKc_Met_Ron Catalytic 100.0 2.7E-36 5.9E-41 310.0 24.9 252 416-691 1-261 (262)
206 cd05604 STKc_SGK3 Catalytic do 100.0 2.9E-37 6.2E-42 327.7 17.8 240 416-681 1-243 (325)
207 cd05041 PTKc_Fes_like Catalyti 100.0 1.8E-36 3.9E-41 309.2 23.0 248 416-687 1-250 (251)
208 cd06654 STKc_PAK1 Catalytic do 100.0 1.4E-36 3E-41 318.1 22.6 252 408-685 18-270 (296)
209 cd07875 STKc_JNK1 Catalytic do 100.0 9.7E-37 2.1E-41 329.0 22.0 266 408-685 22-318 (364)
210 cd05046 PTK_CCK4 Pseudokinase 100.0 1.9E-36 4.2E-41 313.5 23.4 258 410-687 5-274 (275)
211 cd07872 STKc_PCTAIRE2 Catalyti 100.0 9.5E-37 2.1E-41 321.5 21.4 267 410-685 6-286 (309)
212 cd08223 STKc_Nek4 Catalytic do 100.0 1.9E-36 4.1E-41 310.2 22.9 252 411-685 1-254 (257)
213 cd05632 STKc_GRK5 Catalytic do 100.0 1.3E-36 2.8E-41 316.6 21.9 253 412-685 2-261 (285)
214 cd06619 PKc_MKK5 Catalytic dom 100.0 2.1E-36 4.6E-41 314.0 23.2 252 410-685 1-253 (279)
215 cd07874 STKc_JNK3 Catalytic do 100.0 9.5E-37 2.1E-41 328.0 21.2 266 408-685 15-311 (355)
216 cd06637 STKc_TNIK Catalytic do 100.0 1.3E-36 2.8E-41 314.3 21.3 254 407-685 3-269 (272)
217 cd07863 STKc_CDK4 Catalytic do 100.0 1E-36 2.2E-41 317.9 20.6 267 411-685 1-285 (288)
218 cd06631 STKc_YSK4 Catalytic do 100.0 2.2E-36 4.8E-41 311.3 22.8 252 411-684 1-261 (265)
219 cd06640 STKc_MST4 Catalytic do 100.0 4.5E-36 9.8E-41 311.2 25.0 249 410-685 4-253 (277)
220 cd05057 PTKc_EGFR_like Catalyt 100.0 4.3E-36 9.4E-41 311.7 24.8 257 410-691 7-270 (279)
221 cd08217 STKc_Nek2 Catalytic do 100.0 2.6E-36 5.6E-41 310.3 22.9 254 411-685 1-262 (265)
222 cd06638 STKc_myosinIIIA Cataly 100.0 1.6E-36 3.5E-41 316.0 21.6 265 400-686 8-284 (286)
223 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 3.4E-36 7.5E-41 310.7 23.8 254 417-687 2-268 (269)
224 cd07833 STKc_CDKL Catalytic do 100.0 1.6E-36 3.4E-41 316.4 21.4 269 410-685 1-285 (288)
225 KOG0579 Ste20-like serine/thre 100.0 7E-38 1.5E-42 325.9 10.9 251 410-685 32-289 (1187)
226 KOG4279 Serine/threonine prote 100.0 2E-37 4.4E-42 325.7 14.3 245 417-685 582-832 (1226)
227 cd07861 STKc_CDK1_euk Catalyti 100.0 1.6E-36 3.5E-41 315.8 21.1 269 411-685 1-282 (285)
228 cd06612 STKc_MST1_2 Catalytic 100.0 2.5E-36 5.5E-41 309.0 22.2 251 409-685 2-253 (256)
229 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1E-36 2.3E-41 326.1 20.0 265 407-685 12-298 (343)
230 KOG0596 Dual specificity; seri 100.0 2.6E-37 5.7E-42 319.2 14.7 258 405-685 356-627 (677)
231 cd07847 STKc_CDKL1_4 Catalytic 100.0 3.6E-36 7.9E-41 313.3 23.2 268 410-685 1-283 (286)
232 PTZ00284 protein kinase; Provi 100.0 3.9E-36 8.4E-41 334.5 24.8 266 405-685 124-438 (467)
233 KOG0986 G protein-coupled rece 100.0 1.1E-37 2.3E-42 314.8 11.0 251 408-679 183-435 (591)
234 cd06617 PKc_MKK3_6 Catalytic d 100.0 3.2E-36 6.9E-41 313.2 22.2 255 410-685 1-261 (283)
235 cd08227 PK_STRAD_alpha Pseudok 100.0 2.3E-36 5E-41 321.1 21.5 267 414-685 2-307 (327)
236 cd08528 STKc_Nek10 Catalytic d 100.0 4.1E-36 8.9E-41 310.0 22.8 257 411-687 1-268 (269)
237 cd06628 STKc_MAPKKK_Byr2_like 100.0 5E-36 1.1E-40 309.0 23.3 251 411-685 1-264 (267)
238 KOG0690 Serine/threonine prote 100.0 2E-37 4.3E-42 300.2 11.8 251 409-685 167-424 (516)
239 cd05110 PTKc_HER4 Catalytic do 100.0 5.7E-36 1.2E-40 314.6 23.9 258 410-692 7-271 (303)
240 cd06651 STKc_MEKK3 Catalytic d 100.0 6.1E-36 1.3E-40 308.3 23.5 252 410-685 2-261 (266)
241 PHA03209 serine/threonine kina 100.0 4.4E-36 9.6E-41 322.5 23.3 260 409-685 65-351 (357)
242 PHA03207 serine/threonine kina 100.0 3.8E-36 8.1E-41 327.1 22.9 261 409-685 91-375 (392)
243 cd08218 STKc_Nek1 Catalytic do 100.0 4E-36 8.7E-41 307.6 21.9 252 411-685 1-253 (256)
244 cd05044 PTKc_c-ros Catalytic d 100.0 3E-36 6.6E-41 311.0 21.1 250 417-687 2-268 (269)
245 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.6E-36 5.6E-41 314.4 20.6 268 410-685 1-283 (286)
246 cd06639 STKc_myosinIIIB Cataly 100.0 4.6E-36 1E-40 313.5 22.6 264 400-685 12-287 (291)
247 cd06613 STKc_MAP4K3_like Catal 100.0 6.1E-36 1.3E-40 307.3 23.1 255 409-685 2-260 (262)
248 cd08220 STKc_Nek8 Catalytic do 100.0 6.1E-36 1.3E-40 306.2 23.0 251 411-685 1-253 (256)
249 cd06632 STKc_MEKK1_plant Catal 100.0 6.2E-36 1.4E-40 306.4 23.0 250 411-685 1-255 (258)
250 cd06609 STKc_MST3_like Catalyt 100.0 4.1E-36 8.8E-41 311.0 21.7 249 410-685 1-251 (274)
251 cd05086 PTKc_Aatyk2 Catalytic 100.0 1E-35 2.2E-40 306.9 24.6 253 417-686 2-266 (268)
252 cd06626 STKc_MEKK4 Catalytic d 100.0 9.2E-36 2E-40 306.3 24.2 251 411-684 1-260 (264)
253 cd06642 STKc_STK25-YSK1 Cataly 100.0 3.5E-36 7.6E-41 312.0 21.2 248 411-685 5-253 (277)
254 cd05574 STKc_phototropin_like 100.0 6.6E-36 1.4E-40 316.2 23.6 255 410-685 1-289 (316)
255 cd06656 STKc_PAK3 Catalytic do 100.0 2.9E-36 6.3E-41 315.8 20.6 253 407-685 16-269 (297)
256 cd07839 STKc_CDK5 Catalytic do 100.0 2.6E-36 5.6E-41 314.2 20.1 267 411-685 1-281 (284)
257 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 5E-36 1.1E-40 311.8 22.2 271 410-689 4-283 (284)
258 cd07868 STKc_CDK8 Catalytic do 100.0 3.8E-36 8.1E-41 318.2 21.5 262 416-685 7-314 (317)
259 cd06655 STKc_PAK2 Catalytic do 100.0 4.1E-36 8.9E-41 314.4 21.5 251 409-685 18-269 (296)
260 cd06643 STKc_SLK Catalytic dom 100.0 6.1E-36 1.3E-40 311.1 22.6 250 412-685 7-262 (282)
261 cd05042 PTKc_Aatyk Catalytic d 100.0 7.6E-36 1.7E-40 308.0 23.2 253 417-686 2-267 (269)
262 cd06645 STKc_MAP4K3 Catalytic 100.0 3E-36 6.6E-41 310.6 20.0 254 409-685 8-265 (267)
263 cd05586 STKc_Sck1_like Catalyt 100.0 8.7E-37 1.9E-41 324.8 16.4 243 418-685 1-253 (330)
264 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 6.8E-36 1.5E-40 311.4 22.7 255 410-685 1-262 (286)
265 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 7.5E-36 1.6E-40 306.8 22.5 238 417-686 2-261 (262)
266 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.2E-35 2.7E-40 307.1 24.2 258 412-689 1-272 (273)
267 cd07873 STKc_PCTAIRE1 Catalyti 100.0 5.7E-36 1.2E-40 314.4 21.9 267 410-685 6-286 (301)
268 PHA03211 serine/threonine kina 100.0 4.5E-36 9.7E-41 329.0 21.9 262 409-685 168-455 (461)
269 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 4.8E-36 1E-40 312.2 20.8 262 410-686 5-267 (284)
270 smart00219 TyrKc Tyrosine kina 100.0 1.3E-35 2.7E-40 304.0 23.3 251 413-686 2-258 (258)
271 cd06644 STKc_STK10_LOK Catalyt 100.0 1.5E-35 3.2E-40 309.8 24.1 252 409-685 11-269 (292)
272 cd06624 STKc_ASK Catalytic dom 100.0 1.3E-35 2.8E-40 306.1 23.2 255 407-685 5-265 (268)
273 cd06652 STKc_MEKK2 Catalytic d 100.0 1.7E-35 3.8E-40 304.7 23.9 252 410-685 2-261 (265)
274 KOG0983 Mitogen-activated prot 100.0 2.2E-36 4.8E-41 286.8 15.7 253 409-685 91-349 (391)
275 KOG0584 Serine/threonine prote 100.0 3.5E-37 7.6E-42 324.6 11.3 247 414-685 44-296 (632)
276 cd07832 STKc_CCRK Catalytic do 100.0 1.2E-35 2.5E-40 309.5 22.7 268 411-685 1-282 (286)
277 cd05083 PTKc_Chk Catalytic dom 100.0 1.1E-35 2.3E-40 304.2 21.8 247 410-688 6-253 (254)
278 cd06630 STKc_MEKK1 Catalytic d 100.0 1.5E-35 3.3E-40 305.5 23.1 255 411-685 1-264 (268)
279 cd06605 PKc_MAPKK Catalytic do 100.0 7.7E-36 1.7E-40 307.1 20.7 254 410-685 1-257 (265)
280 cd06611 STKc_SLK_like Catalyti 100.0 9.2E-36 2E-40 309.3 21.3 252 409-685 4-262 (280)
281 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1E-35 2.2E-40 308.0 21.4 238 417-686 2-273 (274)
282 KOG4645 MAPKKK (MAP kinase kin 100.0 9.4E-38 2E-42 350.3 6.2 259 404-685 1229-1494(1509)
283 cd06608 STKc_myosinIII_like Ca 100.0 1.2E-35 2.6E-40 307.2 21.5 256 407-685 3-272 (275)
284 cd05580 STKc_PKA Catalytic dom 100.0 1.5E-35 3.2E-40 309.5 22.2 247 410-685 1-254 (290)
285 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.1E-35 4.5E-40 304.2 22.8 258 410-685 1-264 (267)
286 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.1E-35 2.3E-40 309.2 20.9 259 402-685 8-279 (282)
287 cd08530 STKc_CNK2-like Catalyt 100.0 1.4E-35 3E-40 303.4 21.4 252 411-685 1-253 (256)
288 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.8E-35 6.2E-40 306.8 23.9 259 410-685 1-266 (287)
289 cd05578 STKc_Yank1 Catalytic d 100.0 1E-35 2.2E-40 305.1 19.9 249 411-683 1-253 (258)
290 cd06629 STKc_MAPKKK_Bck1_like 100.0 2.3E-35 4.9E-40 305.0 22.5 256 411-685 2-269 (272)
291 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 6.2E-36 1.3E-40 306.7 18.0 238 417-686 2-257 (258)
292 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.2E-35 4.8E-40 302.6 22.0 237 416-686 1-258 (259)
293 cd06623 PKc_MAPKK_plant_like C 100.0 3.8E-35 8.3E-40 301.6 23.3 253 410-685 1-256 (264)
294 cd08225 STKc_Nek5 Catalytic do 100.0 2.2E-35 4.7E-40 302.3 21.3 252 411-685 1-254 (257)
295 cd06658 STKc_PAK5 Catalytic do 100.0 1.2E-35 2.7E-40 310.2 19.7 248 412-685 24-272 (292)
296 cd08215 STKc_Nek Catalytic dom 100.0 4.9E-35 1.1E-39 299.4 23.6 254 411-685 1-255 (258)
297 cd07860 STKc_CDK2_3 Catalytic 100.0 2.3E-35 5E-40 307.0 21.2 268 411-685 1-281 (284)
298 cd07841 STKc_CDK7 Catalytic do 100.0 4.8E-35 1E-39 306.9 23.7 267 411-685 1-282 (298)
299 cd07844 STKc_PCTAIRE_like Cata 100.0 3E-35 6.6E-40 307.3 22.0 267 410-685 5-288 (291)
300 cd07843 STKc_CDC2L1 Catalytic 100.0 1.6E-35 3.5E-40 309.6 20.0 268 410-685 5-290 (293)
301 cd05609 STKc_MAST Catalytic do 100.0 3.7E-35 8.1E-40 308.7 22.6 254 410-686 1-271 (305)
302 cd07867 STKc_CDC2L6 Catalytic 100.0 2.2E-35 4.7E-40 312.4 20.7 262 416-685 7-314 (317)
303 cd06641 STKc_MST3 Catalytic do 100.0 5.1E-35 1.1E-39 303.3 22.8 248 411-685 5-253 (277)
304 PHA03210 serine/threonine kina 100.0 2.9E-35 6.3E-40 328.8 21.9 277 405-685 143-454 (501)
305 KOG0200 Fibroblast/platelet-de 100.0 3.9E-35 8.5E-40 332.5 23.3 268 405-692 291-582 (609)
306 cd06607 STKc_TAO Catalytic dom 100.0 7E-35 1.5E-39 307.0 23.5 250 408-685 13-267 (307)
307 cd06917 STKc_NAK1_like Catalyt 100.0 5.6E-35 1.2E-39 302.9 22.4 249 411-685 2-255 (277)
308 cd05572 STKc_cGK_PKG Catalytic 100.0 5.9E-35 1.3E-39 300.2 22.1 244 418-684 1-251 (262)
309 cd06647 STKc_PAK_I Catalytic d 100.0 4.7E-35 1E-39 306.0 21.6 251 409-685 18-269 (293)
310 cd06659 STKc_PAK6 Catalytic do 100.0 3.3E-35 7.2E-40 307.8 20.5 247 413-685 24-271 (297)
311 KOG0586 Serine/threonine prote 100.0 1.1E-35 2.4E-40 313.1 16.5 253 406-685 52-306 (596)
312 cd07850 STKc_JNK Catalytic dom 100.0 6.3E-35 1.4E-39 313.5 22.6 266 408-685 14-311 (353)
313 cd07870 STKc_PFTAIRE2 Catalyti 100.0 6.3E-35 1.4E-39 304.9 21.9 268 409-685 4-288 (291)
314 KOG0666 Cyclin C-dependent kin 100.0 1.8E-36 4E-41 292.2 9.4 274 409-686 23-338 (438)
315 cd07852 STKc_MAPK15 Catalytic 100.0 8.8E-35 1.9E-39 310.4 22.9 269 408-685 5-295 (337)
316 cd06606 STKc_MAPKKK Catalytic 100.0 1.5E-34 3.3E-39 295.8 23.5 253 411-685 1-257 (260)
317 cd07835 STKc_CDK1_like Catalyt 100.0 9E-35 1.9E-39 302.4 21.7 267 412-685 1-280 (283)
318 KOG4250 TANK binding protein k 100.0 1.1E-35 2.5E-40 316.9 15.1 275 412-694 15-315 (732)
319 cd06614 STKc_PAK Catalytic dom 100.0 1.1E-34 2.3E-39 302.3 22.3 253 407-685 16-270 (286)
320 cd06616 PKc_MKK4 Catalytic dom 100.0 3.2E-35 7E-40 306.6 18.3 254 411-685 5-267 (288)
321 cd06648 STKc_PAK_II Catalytic 100.0 1.2E-34 2.6E-39 301.8 22.4 249 411-685 20-269 (285)
322 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.8E-34 4E-39 296.9 23.5 252 410-685 2-261 (264)
323 cd07842 STKc_CDK8_like Catalyt 100.0 6.6E-35 1.4E-39 308.5 20.6 271 411-685 1-313 (316)
324 cd05633 STKc_GRK3 Catalytic do 100.0 6.8E-35 1.5E-39 302.6 20.3 244 417-685 1-255 (279)
325 cd07837 STKc_CdkB_plant Cataly 100.0 9.2E-35 2E-39 304.2 21.2 271 410-685 1-291 (295)
326 cd07840 STKc_CDK9_like Catalyt 100.0 1.5E-34 3.3E-39 301.1 22.3 267 412-685 1-284 (287)
327 cd07831 STKc_MOK Catalytic dom 100.0 2.4E-34 5.2E-39 298.9 23.6 261 412-685 1-279 (282)
328 cd07845 STKc_CDK10 Catalytic d 100.0 9.2E-35 2E-39 306.4 20.7 269 409-685 6-290 (309)
329 cd06627 STKc_Cdc7_like Catalyt 100.0 2.4E-34 5.2E-39 293.8 23.0 249 411-684 1-250 (254)
330 cd08226 PK_STRAD_beta Pseudoki 100.0 1.3E-34 2.8E-39 307.8 21.8 265 416-685 4-308 (328)
331 KOG1035 eIF-2alpha kinase GCN2 100.0 2.4E-35 5.1E-40 329.6 16.6 253 406-684 475-870 (1351)
332 PHA02882 putative serine/threo 100.0 1.6E-34 3.4E-39 302.2 21.7 260 409-686 11-293 (294)
333 cd05577 STKc_GRK Catalytic dom 100.0 1.6E-34 3.4E-39 299.6 21.3 247 418-685 1-254 (277)
334 cd05122 PKc_STE Catalytic doma 100.0 3E-34 6.6E-39 292.3 23.1 250 411-685 1-251 (253)
335 cd06635 STKc_TAO1 Catalytic do 100.0 3.6E-34 7.9E-39 302.9 24.4 250 411-688 26-280 (317)
336 KOG0612 Rho-associated, coiled 100.0 7E-36 1.5E-40 331.2 11.6 259 403-685 68-338 (1317)
337 cd07849 STKc_ERK1_2_like Catal 100.0 1.1E-34 2.4E-39 309.4 20.4 265 409-685 4-292 (336)
338 PLN00009 cyclin-dependent kina 100.0 1.5E-34 3.3E-39 302.4 20.9 269 410-685 2-284 (294)
339 cd07864 STKc_CDK12 Catalytic d 100.0 1.8E-34 3.9E-39 303.1 21.0 272 407-685 4-299 (302)
340 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.8E-34 3.8E-39 308.0 21.0 272 409-689 4-297 (337)
341 cd07836 STKc_Pho85 Catalytic d 100.0 3.7E-34 8E-39 297.9 22.7 266 411-685 1-281 (284)
342 cd07855 STKc_ERK5 Catalytic do 100.0 1.8E-34 4E-39 307.5 20.6 269 409-685 4-294 (334)
343 cd07865 STKc_CDK9 Catalytic do 100.0 1.4E-34 3.1E-39 305.0 19.4 270 409-685 11-307 (310)
344 cd05581 STKc_PDK1 Catalytic do 100.0 2.3E-34 5E-39 298.6 20.4 251 410-685 1-277 (280)
345 KOG0662 Cyclin-dependent kinas 100.0 3.9E-35 8.4E-40 261.7 12.2 267 411-685 3-283 (292)
346 cd05606 STKc_beta_ARK Catalyti 100.0 4.7E-34 1E-38 296.1 21.9 244 417-685 1-255 (278)
347 cd06657 STKc_PAK4 Catalytic do 100.0 4.6E-34 1E-38 298.2 21.5 246 414-685 24-270 (292)
348 cd05579 STKc_MAST_like Catalyt 100.0 3.6E-34 7.8E-39 294.3 20.3 244 418-686 1-255 (265)
349 cd05583 STKc_MSK_N N-terminal 100.0 4.8E-34 1E-38 297.7 21.5 256 411-687 1-265 (288)
350 cd05118 STKc_CMGC Catalytic do 100.0 4E-34 8.7E-39 297.3 20.8 266 412-685 1-280 (283)
351 cd08222 STKc_Nek11 Catalytic d 100.0 4.6E-34 1E-38 293.1 20.9 253 411-685 1-257 (260)
352 cd07834 STKc_MAPK Catalytic do 100.0 2.7E-34 5.8E-39 305.8 19.7 267 411-685 1-289 (330)
353 cd05613 STKc_MSK1_N N-terminal 100.0 6.4E-34 1.4E-38 297.1 21.9 254 411-685 1-268 (290)
354 cd06618 PKc_MKK7 Catalytic dom 100.0 8.1E-34 1.8E-38 297.3 22.7 254 409-686 14-274 (296)
355 cd05611 STKc_Rim15_like Cataly 100.0 6.3E-34 1.4E-38 292.1 21.2 243 416-684 2-247 (260)
356 cd08216 PK_STRAD Pseudokinase 100.0 7.9E-34 1.7E-38 300.0 22.3 263 417-685 9-295 (314)
357 PHA03390 pk1 serine/threonine- 100.0 8.2E-34 1.8E-38 292.5 21.6 247 406-685 10-262 (267)
358 cd06633 STKc_TAO3 Catalytic do 100.0 2E-33 4.4E-38 296.6 24.7 246 412-685 23-273 (313)
359 cd06634 STKc_TAO2 Catalytic do 100.0 8.8E-34 1.9E-38 298.7 22.0 249 410-686 15-268 (308)
360 cd07879 STKc_p38delta_MAPK13 C 100.0 5E-34 1.1E-38 305.0 20.0 267 409-690 14-304 (342)
361 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 9.5E-34 2.1E-38 300.8 21.8 267 406-685 6-288 (328)
362 cd07857 STKc_MPK1 Catalytic do 100.0 1.1E-33 2.4E-38 301.2 22.1 266 411-685 1-292 (332)
363 cd07866 STKc_BUR1 Catalytic do 100.0 7.5E-34 1.6E-38 299.6 20.6 270 409-685 7-308 (311)
364 cd07838 STKc_CDK4_6_like Catal 100.0 1.4E-33 2.9E-38 294.0 22.2 265 412-685 1-284 (287)
365 cd07877 STKc_p38alpha_MAPK14 C 100.0 9.2E-34 2E-38 303.3 21.3 271 402-685 9-300 (345)
366 KOG1006 Mitogen-activated prot 100.0 1.5E-35 3.4E-40 280.2 5.8 250 415-685 69-327 (361)
367 cd07830 STKc_MAK_like Catalyti 100.0 2.6E-33 5.7E-38 291.3 23.2 265 412-685 1-280 (283)
368 cd07851 STKc_p38 Catalytic dom 100.0 1.3E-33 2.8E-38 301.9 19.9 265 408-685 13-298 (343)
369 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.6E-33 3.5E-38 301.1 20.4 265 408-685 13-298 (343)
370 KOG0669 Cyclin T-dependent kin 100.0 2E-35 4.4E-40 277.1 4.9 269 410-685 17-315 (376)
371 PTZ00024 cyclin-dependent prot 100.0 2.7E-33 5.8E-38 298.7 21.2 268 409-685 7-313 (335)
372 KOG0607 MAP kinase-interacting 100.0 3.7E-34 7.9E-39 277.2 13.0 255 415-684 83-360 (463)
373 cd05123 STKc_AGC Catalytic dom 100.0 4.7E-33 1E-37 283.7 21.5 238 418-681 1-240 (250)
374 cd07829 STKc_CDK_like Catalyti 100.0 2.4E-33 5.2E-38 291.3 19.7 265 412-685 1-279 (282)
375 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.8E-33 3.9E-38 300.7 19.1 266 409-685 4-300 (342)
376 KOG0604 MAP kinase-activated p 100.0 4.6E-34 9.9E-39 274.6 12.5 244 416-685 68-322 (400)
377 KOG0696 Serine/threonine prote 100.0 6.6E-34 1.4E-38 283.5 11.8 243 410-678 349-594 (683)
378 cd05610 STKc_MASTL Catalytic d 100.0 1.3E-32 2.9E-37 316.7 23.2 147 410-563 4-152 (669)
379 KOG1151 Tousled-like protein k 100.0 5.9E-34 1.3E-38 286.0 10.0 264 403-685 456-741 (775)
380 KOG0671 LAMMER dual specificit 100.0 1E-33 2.2E-38 281.7 10.6 271 402-685 81-406 (415)
381 KOG4236 Serine/threonine prote 100.0 6.7E-34 1.5E-38 291.1 9.2 247 415-685 569-819 (888)
382 KOG0587 Traf2- and Nck-interac 100.0 6.1E-33 1.3E-37 301.4 16.6 260 402-685 11-282 (953)
383 KOG0603 Ribosomal protein S6 k 100.0 3.4E-33 7.4E-38 296.0 12.7 242 408-686 320-564 (612)
384 KOG0614 cGMP-dependent protein 100.0 1.1E-33 2.4E-38 288.9 7.7 251 410-685 420-677 (732)
385 cd05576 STKc_RPK118_like Catal 100.0 2.4E-32 5.1E-37 276.4 17.3 220 421-680 4-224 (237)
386 KOG0664 Nemo-like MAPK-related 100.0 8.5E-34 1.8E-38 268.8 4.6 266 413-686 56-344 (449)
387 KOG0984 Mitogen-activated prot 100.0 2E-32 4.4E-37 250.0 10.9 210 405-620 41-256 (282)
388 KOG0695 Serine/threonine prote 100.0 3.2E-32 7E-37 264.8 11.9 250 409-677 249-502 (593)
389 smart00220 S_TKc Serine/Threon 100.0 1.1E-30 2.5E-35 264.1 21.5 237 422-684 1-240 (244)
390 PLN03225 Serine/threonine-prot 100.0 4.4E-31 9.5E-36 296.6 20.3 265 408-685 130-450 (566)
391 PLN03224 probable serine/threo 100.0 8.3E-31 1.8E-35 286.8 21.1 271 407-685 142-500 (507)
392 KOG0608 Warts/lats-like serine 100.0 2.9E-31 6.4E-36 277.1 14.3 210 409-625 628-880 (1034)
393 KOG1027 Serine/threonine prote 100.0 3.7E-31 8E-36 286.3 9.1 249 410-685 509-767 (903)
394 KOG1290 Serine/threonine prote 100.0 2.5E-29 5.3E-34 256.8 18.6 136 405-548 72-221 (590)
395 KOG0665 Jun-N-terminal kinase 100.0 2.9E-30 6.3E-35 251.3 9.7 264 409-685 16-310 (369)
396 KOG0668 Casein kinase II, alph 100.0 1.7E-29 3.6E-34 234.2 11.6 260 409-685 37-322 (338)
397 KOG1152 Signal transduction se 100.0 1.4E-29 3.1E-34 262.8 9.7 198 410-617 561-770 (772)
398 KOG0576 Mitogen-activated prot 100.0 5.3E-30 1.2E-34 270.3 6.1 256 407-685 12-271 (829)
399 KOG0670 U4/U6-associated splic 100.0 4.5E-29 9.7E-34 255.9 11.0 276 399-685 421-746 (752)
400 cd00180 PKc Catalytic domain o 100.0 1.8E-27 3.9E-32 234.7 20.8 212 418-686 1-215 (215)
401 KOG1167 Serine/threonine prote 100.0 2.8E-28 6.1E-33 246.5 11.2 267 405-685 31-381 (418)
402 smart00221 STYKc Protein kinas 99.9 1.8E-26 3.9E-31 230.8 19.3 199 412-618 1-202 (225)
403 KOG1345 Serine/threonine kinas 99.9 2.1E-27 4.5E-32 225.8 11.0 252 408-684 22-283 (378)
404 KOG0195 Integrin-linked kinase 99.9 2.2E-27 4.8E-32 225.3 7.8 250 413-690 193-447 (448)
405 PLN00113 leucine-rich repeat r 99.9 3E-26 6.6E-31 278.2 18.6 218 37-257 24-273 (968)
406 PLN00181 protein SPA1-RELATED; 99.9 2.1E-26 4.6E-31 272.0 10.4 195 464-685 28-265 (793)
407 smart00750 KIND kinase non-cat 99.9 2.5E-25 5.5E-30 214.0 15.3 169 493-693 1-173 (176)
408 KOG1164 Casein kinase (serine/ 99.9 3.4E-23 7.4E-28 218.6 20.6 262 411-693 19-301 (322)
409 KOG1163 Casein kinase (serine/ 99.9 1.2E-23 2.6E-28 197.1 14.2 258 409-687 14-282 (341)
410 KOG1165 Casein kinase (serine/ 99.9 6.8E-23 1.5E-27 200.5 17.3 277 410-710 28-326 (449)
411 PRK09188 serine/threonine prot 99.9 3.6E-23 7.8E-28 217.4 16.0 169 406-591 14-195 (365)
412 KOG0590 Checkpoint kinase and 99.9 9.2E-24 2E-28 236.5 6.3 255 413-685 321-585 (601)
413 KOG1240 Protein kinase contain 99.9 1.7E-23 3.6E-28 232.6 7.8 247 411-685 24-291 (1431)
414 COG0515 SPS1 Serine/threonine 99.9 2.2E-21 4.7E-26 205.4 22.8 258 412-685 2-275 (384)
415 PLN03150 hypothetical protein; 99.8 1.9E-20 4E-25 213.2 16.6 139 37-198 367-511 (623)
416 cd05147 RIO1_euk RIO kinase fa 99.8 8.1E-21 1.8E-25 183.7 11.5 142 415-566 2-168 (190)
417 PRK10359 lipopolysaccharide co 99.8 8.9E-21 1.9E-25 185.2 10.5 174 407-610 28-216 (232)
418 KOG0603 Ribosomal protein S6 k 99.8 9.3E-22 2E-26 209.4 2.8 227 417-679 1-232 (612)
419 PRK12274 serine/threonine prot 99.8 2.3E-19 4.9E-24 171.3 15.1 188 414-620 6-211 (218)
420 cd05145 RIO1_like RIO kinase f 99.8 1.4E-19 3.1E-24 175.7 13.9 142 415-567 2-169 (190)
421 PF14531 Kinase-like: Kinase-l 99.8 9.4E-20 2E-24 183.3 12.6 235 412-676 14-288 (288)
422 KOG4158 BRPK/PTEN-induced prot 99.8 2.7E-19 5.8E-24 179.2 11.0 195 466-685 274-510 (598)
423 KOG1023 Natriuretic peptide re 99.8 1.2E-18 2.6E-23 186.2 12.2 216 462-693 1-228 (484)
424 KOG1166 Mitotic checkpoint ser 99.8 1.6E-18 3.4E-23 197.8 13.1 256 405-695 693-959 (974)
425 PRK10345 hypothetical protein; 99.8 7E-18 1.5E-22 164.6 13.5 136 413-562 5-156 (210)
426 PRK14879 serine/threonine prot 99.7 5.5E-17 1.2E-21 160.8 16.2 136 416-564 2-143 (211)
427 KOG1033 eIF-2alpha kinase PEK/ 99.7 2.4E-18 5.2E-23 180.1 6.4 174 481-681 329-508 (516)
428 KOG0606 Microtubule-associated 99.7 3.4E-18 7.5E-23 190.8 7.8 208 408-677 81-304 (1205)
429 smart00090 RIO RIO-like kinase 99.7 2.7E-17 5.9E-22 164.6 12.0 144 411-566 29-199 (237)
430 KOG0617 Ras suppressor protein 99.7 8.6E-20 1.9E-24 162.7 -5.6 171 82-257 32-212 (264)
431 cd05144 RIO2_C RIO kinase fami 99.7 1.4E-16 3E-21 156.1 11.7 140 411-567 16-177 (198)
432 TIGR03724 arch_bud32 Kae1-asso 99.7 2.1E-16 4.5E-21 155.1 12.5 133 417-565 1-139 (199)
433 PRK09605 bifunctional UGMP fam 99.7 2.5E-16 5.5E-21 177.7 14.2 142 408-565 331-477 (535)
434 KOG0617 Ras suppressor protein 99.6 2.8E-17 6E-22 146.7 -2.8 156 102-261 28-190 (264)
435 KOG0444 Cytoskeletal regulator 99.6 6.5E-17 1.4E-21 170.1 -1.3 170 84-258 104-305 (1255)
436 KOG4194 Membrane glycoprotein 99.6 9.1E-17 2E-21 168.2 -0.4 183 77-259 263-454 (873)
437 KOG0590 Checkpoint kinase and 99.6 1.2E-16 2.5E-21 179.5 -0.0 258 410-685 20-286 (601)
438 cd05119 RIO RIO kinase family, 99.6 6E-15 1.3E-19 143.2 11.8 139 415-567 2-166 (187)
439 PRK15370 E3 ubiquitin-protein 99.6 1.1E-14 2.3E-19 166.8 14.6 211 32-258 53-339 (754)
440 cd05120 APH_ChoK_like Aminogly 99.6 1.4E-14 3E-19 135.0 12.0 136 414-565 2-139 (155)
441 PRK01723 3-deoxy-D-manno-octul 99.6 2.9E-14 6.2E-19 143.1 13.9 137 416-565 37-192 (239)
442 KOG4194 Membrane glycoprotein 99.5 3.7E-15 8E-20 156.3 5.0 172 85-257 80-258 (873)
443 KOG0444 Cytoskeletal regulator 99.5 9.9E-16 2.1E-20 161.4 -2.2 171 84-258 8-187 (1255)
444 PRK15370 E3 ubiquitin-protein 99.5 4.3E-14 9.4E-19 161.9 9.6 162 83-259 199-361 (754)
445 KOG4237 Extracellular matrix p 99.5 3E-15 6.5E-20 150.5 0.0 192 69-260 39-362 (498)
446 KOG1266 Protein kinase [Signal 99.5 4.5E-14 9.9E-19 139.0 7.2 207 459-686 118-332 (458)
447 KOG0472 Leucine-rich repeat pr 99.4 2E-15 4.4E-20 151.8 -6.4 167 85-257 139-310 (565)
448 PRK15387 E3 ubiquitin-protein 99.4 5E-13 1.1E-17 152.3 11.6 157 84-258 223-396 (788)
449 PRK15387 E3 ubiquitin-protein 99.4 7.8E-13 1.7E-17 150.7 11.8 162 79-258 197-376 (788)
450 KOG0472 Leucine-rich repeat pr 99.4 4.6E-15 1E-19 149.3 -5.9 168 87-261 118-292 (565)
451 TIGR01982 UbiB 2-polyprenylphe 99.4 2E-12 4.3E-17 141.2 12.4 144 415-567 122-309 (437)
452 KOG0601 Cyclin-dependent kinas 99.4 5.5E-13 1.2E-17 143.0 7.2 252 409-685 113-379 (524)
453 KOG0532 Leucine-rich repeat (L 99.3 3.4E-14 7.5E-19 149.1 -4.4 169 85-260 77-250 (722)
454 PRK04750 ubiB putative ubiquin 99.3 3.7E-12 8.1E-17 140.4 7.0 149 408-567 118-316 (537)
455 KOG0618 Serine/threonine phosp 99.3 4.6E-13 1E-17 148.2 -1.6 170 85-257 289-489 (1081)
456 PLN03150 hypothetical protein; 99.3 5.5E-12 1.2E-16 144.1 6.9 107 154-260 419-531 (623)
457 KOG0601 Cyclin-dependent kinas 99.3 4.6E-12 9.9E-17 136.0 5.7 252 406-689 261-518 (524)
458 PLN03210 Resistant to P. syrin 99.2 4E-11 8.6E-16 146.9 13.8 80 178-257 779-859 (1153)
459 KOG1243 Protein kinase [Genera 99.2 1E-10 2.3E-15 126.6 15.2 167 430-612 33-199 (690)
460 cd05151 ChoK Choline Kinase (C 99.2 2.7E-11 5.9E-16 115.4 9.5 131 415-564 3-136 (170)
461 cd00116 LRR_RI Leucine-rich re 99.2 1.7E-12 3.7E-17 137.3 0.8 178 82-259 80-293 (319)
462 cd05146 RIO3_euk RIO kinase fa 99.2 7.7E-11 1.7E-15 113.0 11.7 137 416-565 3-174 (197)
463 PLN03210 Resistant to P. syrin 99.2 1.3E-10 2.8E-15 142.5 14.1 173 84-260 658-886 (1153)
464 cd00116 LRR_RI Leucine-rich re 99.2 4E-12 8.7E-17 134.5 0.7 175 83-257 51-263 (319)
465 COG3642 Mn2+-dependent serine/ 99.1 4.4E-10 9.5E-15 103.7 12.3 133 417-565 3-141 (204)
466 KOG0618 Serine/threonine phosp 99.1 1.8E-12 4E-17 143.5 -4.5 173 84-260 242-446 (1081)
467 cd05154 ACAD10_11_like Acyl-Co 99.1 7.3E-10 1.6E-14 110.5 11.9 143 416-564 4-206 (223)
468 KOG3087 Serine/threonine prote 99.1 1.7E-09 3.7E-14 99.2 12.5 145 414-564 11-165 (229)
469 KOG0606 Microtubule-associated 99.1 4.4E-11 9.6E-16 134.7 2.8 248 410-680 804-1084(1205)
470 KOG0532 Leucine-rich repeat (L 99.1 4.5E-12 9.8E-17 133.4 -4.8 153 85-244 100-254 (722)
471 COG4886 Leucine-rich repeat (L 99.0 2.4E-10 5.2E-15 124.7 5.6 170 85-260 118-293 (394)
472 KOG1259 Nischarin, modulator o 99.0 4.4E-11 9.5E-16 116.5 -1.8 127 129-259 284-414 (490)
473 PF14580 LRR_9: Leucine-rich r 99.0 3.1E-10 6.8E-15 106.6 3.7 82 152-236 41-126 (175)
474 COG4886 Leucine-rich repeat (L 99.0 3E-10 6.5E-15 124.0 3.7 155 84-243 141-297 (394)
475 COG4248 Uncharacterized protei 99.0 3.8E-08 8.3E-13 101.0 18.5 262 415-691 16-302 (637)
476 PF14580 LRR_9: Leucine-rich r 98.9 8.2E-10 1.8E-14 103.8 3.9 113 102-216 14-128 (175)
477 KOG1259 Nischarin, modulator o 98.9 2E-10 4.3E-15 112.0 -1.0 102 107-214 284-387 (490)
478 KOG3207 Beta-tubulin folding c 98.9 2.8E-10 6.1E-15 116.7 -0.2 173 83-257 146-339 (505)
479 PRK15123 lipopolysaccharide co 98.9 4.1E-08 8.9E-13 99.7 14.8 142 417-564 29-194 (268)
480 PF01163 RIO1: RIO1 family; I 98.9 1.2E-08 2.6E-13 97.6 10.3 127 425-565 1-156 (188)
481 PF13855 LRR_8: Leucine rich r 98.8 2.1E-09 4.6E-14 83.0 3.8 60 154-213 2-61 (61)
482 PF13855 LRR_8: Leucine rich r 98.8 2.3E-09 5.1E-14 82.7 3.4 61 129-189 1-61 (61)
483 KOG3741 Poly(A) ribonuclease s 98.7 3.5E-07 7.5E-12 96.6 17.0 170 422-614 288-474 (655)
484 KOG1859 Leucine-rich repeat pr 98.7 6.5E-10 1.4E-14 120.3 -3.2 127 129-260 164-295 (1096)
485 KOG2137 Protein kinase [Signal 98.7 5.2E-09 1.1E-13 114.1 3.1 150 519-684 106-264 (700)
486 COG0478 RIO-like serine/threon 98.6 2.5E-07 5.3E-12 90.9 11.8 137 412-564 93-251 (304)
487 KOG4237 Extracellular matrix p 98.6 5.5E-09 1.2E-13 106.0 -1.0 137 122-259 60-203 (498)
488 KOG0531 Protein phosphatase 1, 98.6 1.1E-08 2.3E-13 112.1 1.0 170 84-259 96-270 (414)
489 PF06293 Kdo: Lipopolysacchari 98.6 3.3E-07 7.1E-12 90.1 10.8 108 452-566 55-172 (206)
490 KOG3207 Beta-tubulin folding c 98.5 1.9E-08 4.2E-13 103.5 0.1 174 84-257 122-314 (505)
491 PRK09902 hypothetical protein; 98.5 1.5E-06 3.3E-11 83.6 12.9 143 415-564 23-179 (216)
492 PF08263 LRRNT_2: Leucine rich 98.5 1.7E-07 3.6E-12 66.3 4.4 39 41-81 2-43 (43)
493 KOG0531 Protein phosphatase 1, 98.4 2.8E-08 6.1E-13 108.8 -1.9 170 84-259 73-247 (414)
494 KOG4579 Leucine-rich repeat (L 98.3 1.6E-08 3.4E-13 87.9 -4.4 125 86-215 30-160 (177)
495 KOG1859 Leucine-rich repeat pr 98.3 9.5E-09 2.1E-13 111.5 -8.2 122 108-236 165-292 (1096)
496 KOG1909 Ran GTPase-activating 98.3 4.5E-08 9.7E-13 98.3 -3.5 174 84-257 93-311 (382)
497 COG0661 AarF Predicted unusual 98.3 1.2E-06 2.6E-11 96.4 6.9 143 416-567 131-317 (517)
498 PF06176 WaaY: Lipopolysacchar 98.3 1.7E-05 3.6E-10 76.7 13.5 140 408-564 29-183 (229)
499 TIGR02172 Fb_sc_TIGR02172 Fibr 98.3 1.1E-05 2.4E-10 80.4 12.8 140 416-563 7-181 (226)
500 COG1718 RIO1 Serine/threonine 98.2 3.1E-06 6.8E-11 82.5 7.4 155 401-566 36-217 (268)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=6.4e-61 Score=580.92 Aligned_cols=540 Identities=28% Similarity=0.427 Sum_probs=352.3
Q ss_pred EEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEEccc
Q 005001 85 VVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (720)
Q Consensus 85 v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 162 (720)
++.|+|++|+++|.+|..+.+++.|+.|+|++|.++|.+|..+. ++|+.|+|++|++.|.+|..+ .+++|+.|+|++
T Consensus 406 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~ 484 (968)
T PLN00113 406 LRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSR 484 (968)
T ss_pred CCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcC
Confidence 44455555555555555555555555555555555555554332 566666666666666666544 346777788888
Q ss_pred cccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEecccccccccccc-CC-CCcCeEEccCccCcccCc
Q 005001 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVF-SG-LPLTTLNVANNHFSGWIP 240 (720)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~-~~L~~l~l~~N~l~g~ip 240 (720)
|++++.+|..+.++++|+.|+|++|++.|.+|..+..+++|++|+|++|+++|.+|.. .. .+|+.|+|++|+++|.+|
T Consensus 485 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 564 (968)
T PLN00113 485 NQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIP 564 (968)
T ss_pred CccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCC
Confidence 8888888888888888888888888888888888888888888889888888877643 23 358899999999998888
Q ss_pred cccc---ccceeeecCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCceehhHHHHHHHH
Q 005001 241 RELI---SIRTFIYDGNSFDNGPAPPPPPSTAPPSGRSHNNRSHRQGS--HSPSGSQSSSSDKELPAGAIVGIVLGAVFL 315 (720)
Q Consensus 241 ~~l~---~l~~l~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~s~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 315 (720)
..+. +|+.+++.+|++.+..+...............+..-+.... ..+.+.. .......+.+++++++++++
T Consensus 565 ~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~---~~~~~~~~~~~~~~~~~~~~ 641 (968)
T PLN00113 565 KNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKR---VRKTPSWWFYITCTLGAFLV 641 (968)
T ss_pred hhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCcc---ccccceeeeehhHHHHHHHH
Confidence 7664 56778888888876444322222111111111111111100 0111111 11111123344444444444
Q ss_pred HHHHHHHHHHHhhcccccccCCCCCCCCCCccCCCcchhhhhcccccccccccCCCCchhHHHHHhhhccCCcccccCCc
Q 005001 316 VALALLALYFCIRKNRRKVSGARSSAGSFPVSTNNMNTEMHEQRVKSVAAVTDLTPPPAEKLVIERVAKSGSLKKIKSPI 395 (720)
Q Consensus 316 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (720)
+++++++++ +++++++...+ +..... ...+.. .... .
T Consensus 642 ~~~~~~~~~-~~~~~~~~~~~-~~~~~~----------~~~~~~----------------------~~~~---------~ 678 (968)
T PLN00113 642 LALVAFGFV-FIRGRNNLELK-RVENED----------GTWELQ----------------------FFDS---------K 678 (968)
T ss_pred HHHHHHHHH-HHHhhhccccc-cccccc----------cccccc----------------------cccc---------c
Confidence 333333322 22222211110 000000 000000 0000 0
Q ss_pred cccccchhcHHHHhcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccc
Q 005001 396 TATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLA 474 (720)
Q Consensus 396 ~~~~~~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 474 (720)
..... ........|...++||+|+||.||+|.. .++..||+|++...... ..+|++.+++++||||++++
T Consensus 679 ~~~~~---~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~l~~l~HpnIv~~~ 749 (968)
T PLN00113 679 VSKSI---TINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI------PSSEIADMGKLQHPNIVKLI 749 (968)
T ss_pred cchhh---hHHHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc------cHHHHHHHhhCCCCCcceEE
Confidence 00001 1222334577788999999999999987 57899999998643211 12457788999999999999
Q ss_pred eEEeecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCce
Q 005001 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNP 554 (720)
Q Consensus 475 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~ 554 (720)
+++.+.+..++||||+++|+|.++++ .++|.++.+++.|+++||+|||..+.++|+||||||+||+++.++..
T Consensus 750 ~~~~~~~~~~lv~Ey~~~g~L~~~l~-------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~ 822 (968)
T PLN00113 750 GLCRSEKGAYLIHEYIEGKNLSEVLR-------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEP 822 (968)
T ss_pred EEEEcCCCCEEEEeCCCCCcHHHHHh-------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCce
Confidence 99999999999999999999999995 37899999999999999999996655699999999999999999888
Q ss_pred EEcccCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccc
Q 005001 555 HLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQ 634 (720)
Q Consensus 555 kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 634 (720)
++. ||....... .....||+.|+|||++.+..++.++|||||||++|||+||+.||+..... ......|....
T Consensus 823 ~~~-~~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~-~~~~~~~~~~~ 895 (968)
T PLN00113 823 HLR-LSLPGLLCT-----DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGV-HGSIVEWARYC 895 (968)
T ss_pred EEE-ecccccccc-----CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCC-CCcHHHHHHHh
Confidence 775 665443221 12236889999999999999999999999999999999999999643322 12233333221
Q ss_pred cccHHHHHhhcccccCC--CCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhcc
Q 005001 635 LHDIDALAKMVDPALNG--MYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 695 (720)
Q Consensus 635 ~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~~ 695 (720)
... ......+++.... ..+.....++.+++.+||+.||++||+|.|+++.|+++.+..+.
T Consensus 896 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~~~ 957 (968)
T PLN00113 896 YSD-CHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSSSS 957 (968)
T ss_pred cCc-cchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccccc
Confidence 111 1223334444322 23345566788999999999999999999999999998775543
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-50 Score=421.49 Aligned_cols=291 Identities=50% Similarity=0.885 Sum_probs=250.4
Q ss_pred cccccchhcHHHHhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccce
Q 005001 396 TATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAG 475 (720)
Q Consensus 396 ~~~~~~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~ 475 (720)
....|++.++..++++|...+.||+|+||.||+|...+|..||||++....... ..+|..|+.++.+++|||+|+++|
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlG 138 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLG 138 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEE
Confidence 455689999999999999999999999999999999999999999886544321 455999999999999999999999
Q ss_pred EEeecC-eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCce
Q 005001 476 YCAEHG-QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNP 554 (720)
Q Consensus 476 ~~~~~~-~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~ 554 (720)
||.+.+ +.+||||||++|+|.++++..... .++|.++.+|+.++|+||+|||+.+.|.||||||||+|||+|+++++
T Consensus 139 yC~e~~~~~~LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~a 216 (361)
T KOG1187|consen 139 YCLEGGEHRLLVYEYMPNGSLEDHLHGKKGE--PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNA 216 (361)
T ss_pred EEecCCceEEEEEEccCCCCHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCE
Confidence 999998 599999999999999999843221 88999999999999999999999988889999999999999999999
Q ss_pred EEcccCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccc
Q 005001 555 HLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQ 634 (720)
Q Consensus 555 kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 634 (720)
||+|||+|+..+...........||.+|+|||++..+..+.|+|||||||++.||+||+.+.+...+.....+..|..+.
T Consensus 217 KlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~ 296 (361)
T KOG1187|consen 217 KLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPL 296 (361)
T ss_pred EccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHH
Confidence 99999999766541111111117999999999999999999999999999999999999999876655556678887655
Q ss_pred cccHHHHHhhcccccC-CCCCh-hHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHH
Q 005001 635 LHDIDALAKMVDPALN-GMYPA-KSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQ 691 (720)
Q Consensus 635 ~~~~~~~~~~~~~~~~-~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~ 691 (720)
+.+. .+.+++|+.+. ..++. .....+.++..+|++.+|++||+|.||++.|+.+..
T Consensus 297 ~~~~-~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 297 LEEG-KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred HHCc-chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 5544 78889999976 55664 577789999999999999999999999999866543
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-48 Score=388.10 Aligned_cols=259 Identities=26% Similarity=0.472 Sum_probs=218.3
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecC-eEEEEEE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG-QRLLVYE 488 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lV~e 488 (720)
+.+..+.||+|..|+||++.++ +++.+|+|.+.. .......+++.+|+++++.++||+||.++|.|..++ ...|+||
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~-~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE 158 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILL-NIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME 158 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecc-cCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence 3455678999999999999886 688899999943 345667789999999999999999999999999999 5999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
||++|+|++++.. .+.+++....+|+.+|++||.|||+.. +||||||||+|||++..|++||+|||.+....+.
T Consensus 159 YMDgGSLd~~~k~----~g~i~E~~L~~ia~~VL~GL~YLh~~~--~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS 232 (364)
T KOG0581|consen 159 YMDGGSLDDILKR----VGRIPEPVLGKIARAVLRGLSYLHEER--KIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS 232 (364)
T ss_pred hcCCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhhcc--CeeeccCCHHHeeeccCCCEEeccccccHHhhhh
Confidence 9999999999973 478999999999999999999999732 9999999999999999999999999999876544
Q ss_pred CccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccc
Q 005001 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPA 648 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (720)
....++||..|||||.+.+..|+.++||||||+.++|+++|+.||....+. ...-.+.+..+++..
T Consensus 233 ---~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~-----------~~~~~~Ll~~Iv~~p 298 (364)
T KOG0581|consen 233 ---IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPP-----------YLDIFELLCAIVDEP 298 (364)
T ss_pred ---hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCC-----------CCCHHHHHHHHhcCC
Confidence 456789999999999999999999999999999999999999999865211 111223344444433
Q ss_pred cCCCCCh-hHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 649 LNGMYPA-KSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 649 ~~~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
.. ..|. .++.++..|+..||++||.+||+++|++++ .++.++
T Consensus 299 pP-~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H--pfi~~~ 341 (364)
T KOG0581|consen 299 PP-RLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH--PFIKKF 341 (364)
T ss_pred CC-CCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC--HHHhhc
Confidence 22 2344 488899999999999999999999999987 344444
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-47 Score=398.69 Aligned_cols=263 Identities=33% Similarity=0.556 Sum_probs=225.4
Q ss_pred ccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecC-eEEEEEEecCC
Q 005001 414 QEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG-QRLLVYEYVGN 492 (720)
Q Consensus 414 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lV~e~~~~ 492 (720)
..+.||+|+||+||+|.+.....||||++............|.+|+.++.+++|||||+++|++.+.. ..++||||+++
T Consensus 45 ~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~ 124 (362)
T KOG0192|consen 45 IEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPG 124 (362)
T ss_pred hhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCC
Confidence 34459999999999999975555999999877666555789999999999999999999999999887 79999999999
Q ss_pred CCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-cEEecCCCCCEEeCCCC-ceEEcccCCCccCCCCCc
Q 005001 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS-VVHRNFKSANILLDDEL-NPHLSDCGLAALTPNTER 570 (720)
Q Consensus 493 gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~-iiH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~~~~~~ 570 (720)
|+|.++++.. ....+++..+++++.|||+|++|||+. + ||||||||+|||++.++ ++||+|||+++......
T Consensus 125 GsL~~~l~~~--~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~- 198 (362)
T KOG0192|consen 125 GSLSVLLHKK--RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK- 198 (362)
T ss_pred CcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecccc-
Confidence 9999999843 367899999999999999999999999 7 99999999999999998 99999999998665432
Q ss_pred cccccccccccccCccccc--cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccc
Q 005001 571 QVSTQMVGAFGYSAPEFAL--SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPA 648 (720)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (720)
...+...||+.|||||++. ...|+.|+||||||+++|||+||+.||....+ ......++...
T Consensus 199 ~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~----------------~~~~~~v~~~~ 262 (362)
T KOG0192|consen 199 TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP----------------VQVASAVVVGG 262 (362)
T ss_pred ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH----------------HHHHHHHHhcC
Confidence 2233468999999999999 66999999999999999999999999986543 12233334445
Q ss_pred cCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhccccc
Q 005001 649 LNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKR 698 (720)
Q Consensus 649 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~~~~~ 698 (720)
.+...|..++..+..+|..||+.||++||++.+++..|+.+.........
T Consensus 263 ~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~~~~ 312 (362)
T KOG0192|consen 263 LRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISSAGP 312 (362)
T ss_pred CCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcccCc
Confidence 55566677889999999999999999999999999999998887665433
No 5
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.6e-48 Score=384.55 Aligned_cols=254 Identities=24% Similarity=0.363 Sum_probs=209.5
Q ss_pred HhcCCCccceeccCCCcEEEEEE-EcCCcEEEEEEccccccChH-----HHHHHHHHHHHhhcCCCCCccccceEEeecC
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQ-----EEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG 481 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 481 (720)
..+.|...+.||+|+||.|-+|. .++|+.||||++.+...... ......+|+++|++++|||||+++++|+..+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 44568888999999999999995 45799999999976554321 1233568999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCC---CceEEcc
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE---LNPHLSD 558 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~---~~~kl~D 558 (720)
..|+||||++||+|.+.+- .++.+.+...+.+++|++.|+.|||++ ||+||||||+|||+..+ ..+||+|
T Consensus 250 s~YmVlE~v~GGeLfd~vv----~nk~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItD 322 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVV----ANKYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITD 322 (475)
T ss_pred ceEEEEEEecCccHHHHHH----hccccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecc
Confidence 9999999999999999986 467888888899999999999999999 99999999999999766 6799999
Q ss_pred cCCCccCCCCCccccccccccccccCccccccCCC---cccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcccc
Q 005001 559 CGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIY---TVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQL 635 (720)
Q Consensus 559 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~ 635 (720)
||+|+... ....+...+|||.|.|||++.+..+ ..++|+||+||++|-+++|.+||.......
T Consensus 323 FGlAK~~g--~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~------------ 388 (475)
T KOG0615|consen 323 FGLAKVSG--EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP------------ 388 (475)
T ss_pred cchhhccc--cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc------------
Confidence 99999876 3456677899999999999987653 347899999999999999999998654322
Q ss_pred ccHHHHHhhcccccCC--CCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 636 HDIDALAKMVDPALNG--MYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 636 ~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.....+....+.. ..-...+++..+||.+||..||++||++.|++++
T Consensus 389 ---sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 389 ---SLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred ---cHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 1111112222211 1123466788999999999999999999999987
No 6
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-47 Score=396.37 Aligned_cols=260 Identities=27% Similarity=0.452 Sum_probs=228.3
Q ss_pred HhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
....+..++.||+|.||+||.|.+.....||+|.++.... ..+.|.+|+++|++++|+|||++++++..++.++|||
T Consensus 204 ~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m---~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVt 280 (468)
T KOG0197|consen 204 PREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM---SPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVT 280 (468)
T ss_pred cHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEecccc---ChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEE
Confidence 3344556778999999999999998888999999986543 3567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
|||+.|+|.++|+. ..+..+...+.+.++.|||+|++||+++ ++|||||.++||||+++..+||+|||+|+...+
T Consensus 281 E~m~~GsLl~yLr~--~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d 355 (468)
T KOG0197|consen 281 EYMPKGSLLDYLRT--REGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGD 355 (468)
T ss_pred EecccCcHHHHhhh--cCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCC
Confidence 99999999999984 3467889999999999999999999999 999999999999999999999999999996555
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
+........--+..|.|||.+..+.++.|||||||||+||||+| |+.||.+... ..+.+.++
T Consensus 356 ~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn-----------------~ev~~~le 418 (468)
T KOG0197|consen 356 DEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN-----------------EEVLELLE 418 (468)
T ss_pred CceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH-----------------HHHHHHHh
Confidence 44444444445678999999999999999999999999999999 9999976543 34445667
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHh
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQR 692 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~ 692 (720)
.+.+-..|..|+..++++|..||+.+|++|||++.+...|+++...
T Consensus 419 ~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 419 RGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred ccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 7888888999999999999999999999999999999999887553
No 7
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.4e-48 Score=366.06 Aligned_cols=260 Identities=25% Similarity=0.405 Sum_probs=220.7
Q ss_pred cCCCccceeccCCCcEEEEEE-EcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccce-EEeec-CeEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAG-YCAEH-GQRLLV 486 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~-~~~~~-~~~~lV 486 (720)
.+|+++++||+|.||+||++. ..+|..+|.|+++-........+....|+.+|++++|||||++++ .+.++ +.++||
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 457888899999999999994 568999999999977778888899999999999999999999998 44444 448999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS--VVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~--iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
||+|++|+|...++..+...+.+++..+++++.|++.||.++|+.. ++ |+||||||.||+++.+|.+||+|||+++.
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 9999999999999988888999999999999999999999999942 25 89999999999999999999999999998
Q ss_pred CCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhh
Q 005001 565 TPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKM 644 (720)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (720)
+... .......+|||.||+||.+.+.+|+.++||||+||++|||+.-+.||.+.+-. +...++
T Consensus 178 l~s~-~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~----------------~L~~KI 240 (375)
T KOG0591|consen 178 LSSK-TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLL----------------SLCKKI 240 (375)
T ss_pred hcch-hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHH----------------HHHHHH
Confidence 7653 34456689999999999999999999999999999999999999999875211 111222
Q ss_pred cccccCCCCC-hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 005001 645 VDPALNGMYP-AKSLSRFADIIALCVQPEPEFRPPMSEVVQALVR 688 (720)
Q Consensus 645 ~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~ 688 (720)
...... ..| ...+.++.++|..|+..||+.||+...+++.+..
T Consensus 241 ~qgd~~-~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 241 EQGDYP-PLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred HcCCCC-CCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 222222 233 6688899999999999999999997666666544
No 8
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.7e-46 Score=394.34 Aligned_cols=250 Identities=26% Similarity=0.469 Sum_probs=218.7
Q ss_pred cCCCccceeccCCCcEEEEEEE-cCCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.+|...++||+|||+.||.++. ..|+.||+|++.+... +......+.+|+++.+.++|||||+++++|++.++.|||+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5688999999999999999987 7899999999976544 4445677889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
|+|..++|..+++ ..+.+++.+++.+++||+.||.|||+. +|+|||||..|++++++.++||+|||+|.....
T Consensus 98 ELC~~~sL~el~K----rrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~ 170 (592)
T KOG0575|consen 98 ELCHRGSLMELLK----RRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEY 170 (592)
T ss_pred EecCCccHHHHHH----hcCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecC
Confidence 9999999999887 468999999999999999999999999 999999999999999999999999999998765
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
+. ......+|||.|+|||++.+...+..+||||+||+||-|++|++||+...-. +.+.++...
T Consensus 171 ~~-Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vk----------------ety~~Ik~~ 233 (592)
T KOG0575|consen 171 DG-ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVK----------------ETYNKIKLN 233 (592)
T ss_pred cc-cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHH----------------HHHHHHHhc
Confidence 43 3345589999999999999999999999999999999999999999864322 222222222
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.. ..|...+.+..+||.++|+.||.+|||+++|+.+
T Consensus 234 ~Y--~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 234 EY--SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred Cc--ccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 22 2456777888999999999999999999999976
No 9
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-46 Score=370.88 Aligned_cols=251 Identities=26% Similarity=0.442 Sum_probs=205.6
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
..+|...+.||+|+||+||+|++. ++..||||.+..........+.+..|+.+++.++|||||.+++++...+..|+||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 356888888999999999999875 5899999999887767777888999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCC------CceEEcccCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE------LNPHLSDCGL 561 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~------~~~kl~Dfg~ 561 (720)
|||+||||.++++ ..+.+++..++.++.|+|.||++||++ +||||||||+|||++.. -.+||+|||+
T Consensus 89 EyC~gGDLs~yi~----~~~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf 161 (429)
T KOG0595|consen 89 EYCNGGDLSDYIR----RRGRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGF 161 (429)
T ss_pred EeCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccch
Confidence 9999999999998 356899999999999999999999999 99999999999999875 4589999999
Q ss_pred CccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHH
Q 005001 562 AALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDAL 641 (720)
Q Consensus 562 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (720)
|+.+... ......+|++-|||||++...+|+.|+|+||+|+++|||++|+.||+...+.+....+.....
T Consensus 162 AR~L~~~--~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~-------- 231 (429)
T KOG0595|consen 162 ARFLQPG--SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNE-------- 231 (429)
T ss_pred hhhCCch--hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcccc--------
Confidence 9988643 344567999999999999999999999999999999999999999987665433222211111
Q ss_pred HhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHH
Q 005001 642 AKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVV 683 (720)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell 683 (720)
.....+......+.+++...++.+|.+|-++.+-.
T Consensus 232 -------~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~ 266 (429)
T KOG0595|consen 232 -------IVPVLPAELSNPLRELLISLLQRNPKDRISFEDFF 266 (429)
T ss_pred -------ccCchhhhccCchhhhhhHHHhcCccccCchHHhh
Confidence 11112222333444666666666666665555444
No 10
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.8e-45 Score=397.89 Aligned_cols=264 Identities=27% Similarity=0.460 Sum_probs=225.7
Q ss_pred hcCCCccceeccCCCcEEEEEEEc------CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCe
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (720)
..+.+..+.||+|+||+||+|+.. +...||||.+++.. +.+..++|.+|+++++.++|||||+++|.|.+++.
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a-~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P 563 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA-ENQARQDFRREAELLAELQHPNIVRLLGVCREGDP 563 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc-cHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe
Confidence 344556678999999999999653 34579999998765 55578899999999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHhhhccC------C----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCC
Q 005001 483 RLLVYEYVGNGNLHDMLHFADD------S----SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL 552 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~------~----~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~ 552 (720)
+++|+|||..|||.++|+.... . ..+++..+.+.||.|||.|++||-++ .+|||||.++|+||+++.
T Consensus 564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l 640 (774)
T KOG1026|consen 564 LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENL 640 (774)
T ss_pred eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccce
Confidence 9999999999999999975321 1 23489999999999999999999999 999999999999999999
Q ss_pred ceEEcccCCCccCCCCCccccc-cccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHh
Q 005001 553 NPHLSDCGLAALTPNTERQVST-QMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRW 630 (720)
Q Consensus 553 ~~kl~Dfg~a~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~ 630 (720)
.|||+|||+++.....+.+... ...-+++|||||.+..++||.+||||||||+|||+++ |+.||.+....
T Consensus 641 ~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~-------- 712 (774)
T KOG1026|consen 641 VVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ-------- 712 (774)
T ss_pred EEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH--------
Confidence 9999999999977666655543 3456789999999999999999999999999999999 99999865432
Q ss_pred hccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 631 ATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
+.+..+..... ...|..+|.++++||..||+..|.+||+++||-.+|....+..
T Consensus 713 --------EVIe~i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 713 --------EVIECIRAGQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred --------HHHHHHHcCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 33333333344 5678999999999999999999999999999999998876544
No 11
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-45 Score=365.52 Aligned_cols=251 Identities=25% Similarity=0.381 Sum_probs=212.4
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccCh-HHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL-QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
.++|+..++||+|+||+||+++.+ +++.||+|++++..... .+.+....|..++.+++||+||+++..|.+.+.+|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 357899999999999999999654 68899999998776543 3667888999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
+||+.||.|..+|+ ..+.+++..++-++..|+.||.|||+. +||||||||+|||+|.+|+++|+|||+++...
T Consensus 104 ld~~~GGeLf~hL~----~eg~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~ 176 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQ----REGRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDL 176 (357)
T ss_pred EeccCCccHHHHHH----hcCCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhcc
Confidence 99999999999997 468899999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
... .....++||+.|||||++.+..|+.++|+||||+++|||++|.+||...+..... +++..
T Consensus 177 ~~~-~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~----------------~~I~~ 239 (357)
T KOG0598|consen 177 KDG-DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMY----------------DKILK 239 (357)
T ss_pred cCC-CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHH----------------HHHhc
Confidence 332 3345589999999999999999999999999999999999999999876533221 12222
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCC----CHHHHHH
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRP----PMSEVVQ 684 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP----s~~ell~ 684 (720)
.. ....|...+.+.++++++.|..||++|. ++.+|-+
T Consensus 240 ~k-~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~ 280 (357)
T KOG0598|consen 240 GK-LPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKR 280 (357)
T ss_pred Cc-CCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhc
Confidence 22 1223444677888999999999999996 4555443
No 12
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.4e-45 Score=354.36 Aligned_cols=268 Identities=22% Similarity=0.315 Sum_probs=213.0
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
+.|+...++|+|+||.||+++++ +|+.||||++......+...+-.++|++++++++|+|+|.++++|.....+++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 45788889999999999999886 59999999998776666666778999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
||+. ++.+-+. .....++...+.+++.|++.|+.|+|++ ++|||||||+|||++.+|.+||+|||+|+.+...
T Consensus 82 ~~dh-TvL~eLe---~~p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p 154 (396)
T KOG0593|consen 82 YCDH-TVLHELE---RYPNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSAP 154 (396)
T ss_pred ecch-HHHHHHH---hccCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcCC
Confidence 9987 4444443 2456788899999999999999999999 9999999999999999999999999999988754
Q ss_pred CccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccc--------cHH
Q 005001 569 ERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLH--------DID 639 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~--------~~~ 639 (720)
.+ .-+.++.|.+|+|||.+.+ .+|+.++||||+||++.||++|.+-|.+...-+....+......+. ...
T Consensus 155 gd-~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~ 233 (396)
T KOG0593|consen 155 GD-NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNP 233 (396)
T ss_pred cc-hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCC
Confidence 33 3355788999999999998 7799999999999999999999999988765444433332111100 001
Q ss_pred HHHhhcccccCCCCC-----hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 640 ALAKMVDPALNGMYP-----AKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 640 ~~~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.+..+.-+......| .....-+.++++.||+.||.+|++.++++.+
T Consensus 234 ~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 234 FFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred ceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 111111111111111 1234468899999999999999999999865
No 13
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=7.7e-44 Score=337.08 Aligned_cols=267 Identities=24% Similarity=0.383 Sum_probs=217.2
Q ss_pred cCCCccceeccCCCcEEEEEE-EcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
.+|...+++|+|.||.||+|+ .++|+.||||+++............++|+..++.++|+||+.++++|...+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 468888999999999999995 4679999999998776655556778999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
||+. +|...++ +....++..+++.++.++++|++|||++ .|+||||||.|+|++.+|.+||+|||+++.+...
T Consensus 82 fm~t-dLe~vIk---d~~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p 154 (318)
T KOG0659|consen 82 FMPT-DLEVVIK---DKNIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSP 154 (318)
T ss_pred eccc-cHHHHhc---ccccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence 9986 9999997 4567889999999999999999999999 9999999999999999999999999999988765
Q ss_pred CccccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHH--hhccc---cccHHH--
Q 005001 569 ERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVR--WATPQ---LHDIDA-- 640 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~--~~~~~---~~~~~~-- 640 (720)
..... ..+-|..|+|||.+.|. .|+..+|+||.|||+.||+-|.+-|.+...-+....+- ..+|. |.++..
T Consensus 155 ~~~~~-~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lp 233 (318)
T KOG0659|consen 155 NRIQT-HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLP 233 (318)
T ss_pred Ccccc-cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccc
Confidence 54333 33789999999999985 58999999999999999999888777765544433331 22222 222222
Q ss_pred -HHhh---cccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 641 -LAKM---VDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 641 -~~~~---~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
..++ -.+..+..++ .++.+..+|+.+|+..||.+|++++|++++
T Consensus 234 dY~~~~~~P~~~~~~lf~-aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 234 DYVKIQQFPKPPLNNLFP-AASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cHHHHhcCCCCccccccc-cccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 2221 1222233333 344556999999999999999999999976
No 14
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-44 Score=381.60 Aligned_cols=275 Identities=25% Similarity=0.425 Sum_probs=233.5
Q ss_pred CCCccceeccCCCcEEEEEEEcC----CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFAN----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
...++++||.|.||+||+|+++- ...||||.++... ......+|+.|+.+|.+++||||++|.|........+||
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy-tekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIi 708 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMII 708 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCc-cHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEE
Confidence 34567899999999999998752 4579999998654 566788999999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
+|||++|+|+.+|+.. .+.+++.+...++++|+.|+.||-+. ++|||||.++|||++.+..+|++|||+++.+.
T Consensus 709 TEyMENGsLDsFLR~~---DGqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRvle 782 (996)
T KOG0196|consen 709 TEYMENGSLDSFLRQN---DGQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 782 (996)
T ss_pred hhhhhCCcHHHHHhhc---CCceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceeecc
Confidence 9999999999999854 46699999999999999999999999 99999999999999999999999999999775
Q ss_pred CCCccccccccc--cccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHh
Q 005001 567 NTERQVSTQMVG--AFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAK 643 (720)
Q Consensus 567 ~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (720)
++.....+...| +.+|.|||.+...+++.++|||||||+|||.++ |..||-.+.. .++.+
T Consensus 783 dd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN-----------------QdVIk 845 (996)
T KOG0196|consen 783 DDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-----------------QDVIK 845 (996)
T ss_pred cCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch-----------------HHHHH
Confidence 544222222222 468999999999999999999999999999888 9999975543 33445
Q ss_pred hcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhccccccCCCCCCCccc
Q 005001 644 MVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRRSSDESGFSYR 709 (720)
Q Consensus 644 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~~~~~~~~~~~~~~~~ 709 (720)
.++..++.+.|.+|+..|.+||..||++|-.+||.+.+|+..|.+++.+...-..-.....+-+..
T Consensus 846 aIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk~~~~~~~r~s~~ 911 (996)
T KOG0196|consen 846 AIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLKTIAPESPRPSQP 911 (996)
T ss_pred HHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhcccCCCCCCCccc
Confidence 566778888899999999999999999999999999999999999988766554444444443333
No 15
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-43 Score=363.24 Aligned_cols=270 Identities=26% Similarity=0.392 Sum_probs=219.8
Q ss_pred HhcCCCccceeccCCCcEEEEEE-EcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec--CeEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQRL 484 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 484 (720)
..+.|+.++.||+|+||.||+|+ ..+|+.||+|++..+...........+|+.+|++++||||++|.+...+. +.+|
T Consensus 115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY 194 (560)
T KOG0600|consen 115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY 194 (560)
T ss_pred chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence 34568889999999999999995 46799999999987776666778889999999999999999999998776 7899
Q ss_pred EEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
+|+|||+. ||.-++. ...-.+++.+++.+++|++.||+|+|++ +|+|||||.+|||||.+|.+||+|||+|++
T Consensus 195 lVFeYMdh-DL~GLl~---~p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~ 267 (560)
T KOG0600|consen 195 LVFEYMDH-DLSGLLS---SPGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARF 267 (560)
T ss_pred EEEecccc-hhhhhhc---CCCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceee
Confidence 99999987 8888886 3455899999999999999999999999 999999999999999999999999999998
Q ss_pred CCCCCccccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHH-Hh-hccccccHHHH
Q 005001 565 TPNTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLV-RW-ATPQLHDIDAL 641 (720)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~-~~-~~~~~~~~~~~ 641 (720)
+........+..+-|.+|+|||++.|. .|+.++|+||.|||+.||++|++.|.+..+......+ .. ..|....+. .
T Consensus 268 y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~-~ 346 (560)
T KOG0600|consen 268 YTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWP-V 346 (560)
T ss_pred ccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccc-c
Confidence 877766666778899999999999985 5999999999999999999999999987765444333 22 122222221 1
Q ss_pred Hhhcccc-c--CCCCC-------hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 642 AKMVDPA-L--NGMYP-------AKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 642 ~~~~~~~-~--~~~~~-------~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.++-.-. + ...+. ...+....+|+..+|..||.+|.|+.++++.
T Consensus 347 ~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 347 SKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred ccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 1111000 1 11111 1234567799999999999999999998854
No 16
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-44 Score=365.35 Aligned_cols=269 Identities=25% Similarity=0.377 Sum_probs=220.2
Q ss_pred HhcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCC-CCCccccceEEeecC-eEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHG-QRL 484 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~-~~~ 484 (720)
.-++|...+.||.|+||.||+|+. ..|+.||||+++....+. ++..-+||+..+++++ ||||+++.+.+.+++ .++
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~-ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~ 86 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSW-EECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY 86 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccH-HHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence 346788899999999999999965 468999999999877664 3445578999999998 999999999999988 999
Q ss_pred EEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
+|||||+. +|+++++ ..+..+++..++.|+.||++||+|+|++ |+.|||+||+|||+.....+||+|||+||.
T Consensus 87 fVfE~Md~-NLYqLmK---~R~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARe 159 (538)
T KOG0661|consen 87 FVFEFMDC-NLYQLMK---DRNRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLARE 159 (538)
T ss_pred eeHHhhhh-hHHHHHh---hcCCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccccccc
Confidence 99999976 9999997 3478899999999999999999999999 999999999999999888999999999997
Q ss_pred CCCCCccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHH--hhccccccHH--
Q 005001 565 TPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVR--WATPQLHDID-- 639 (720)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~--~~~~~~~~~~-- 639 (720)
...... -+.++.|.+|+|||++.+ +-|+.++|+||+|||++|+.+-++.|.+..+.+....+- ..+|....+.
T Consensus 160 v~SkpP--YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg 237 (538)
T KOG0661|consen 160 VRSKPP--YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEG 237 (538)
T ss_pred cccCCC--cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhH
Confidence 755433 355789999999999865 668999999999999999999999999887765554432 2344433332
Q ss_pred -HHHhhcccccCCCCC-------hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 640 -ALAKMVDPALNGMYP-------AKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 640 -~~~~~~~~~~~~~~~-------~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
.+.+.+.-.+....+ ..++.+..++|.+|+.+||.+||||+|++++-
T Consensus 238 ~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~p 292 (538)
T KOG0661|consen 238 YNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHP 292 (538)
T ss_pred HHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCc
Confidence 233333222111111 12567889999999999999999999999874
No 17
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-43 Score=362.54 Aligned_cols=253 Identities=25% Similarity=0.364 Sum_probs=215.0
Q ss_pred hcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHH-HHHHHHHHHHhhcC-CCCCccccceEEeecCeEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQE-EDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~-~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 485 (720)
.++|...+.||+|+|++|++|+. ++++.||||++.+...-.+. .+-...|-..|.++ +||.|++|+..|.++..+|+
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF 151 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF 151 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence 46788899999999999999955 57899999999766543332 34456777888888 89999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
|+||+++|+|.++|+. -+.+++..++.++.+|+.||+|||++ |||||||||+|||+|++|++||+|||.|..+
T Consensus 152 vLe~A~nGdll~~i~K----~Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~l 224 (604)
T KOG0592|consen 152 VLEYAPNGDLLDLIKK----YGSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKIL 224 (604)
T ss_pred EEEecCCCcHHHHHHH----hCcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccccC
Confidence 9999999999999984 48899999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCcc----------c--cccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcc
Q 005001 566 PNTERQ----------V--STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATP 633 (720)
Q Consensus 566 ~~~~~~----------~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~ 633 (720)
.+.... . ...++||..|.+||++.....++.+|+|+|||++|+|+.|.+||.+.++-
T Consensus 225 ~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney----------- 293 (604)
T KOG0592|consen 225 SPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY----------- 293 (604)
T ss_pred ChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH-----------
Confidence 532211 1 14589999999999999999999999999999999999999999876542
Q ss_pred ccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 634 QLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
-.+.++++. .-.+|+..++...+|+++.|..||.+|++.++|.++-
T Consensus 294 -----liFqkI~~l--~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp 339 (604)
T KOG0592|consen 294 -----LIFQKIQAL--DYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHP 339 (604)
T ss_pred -----HHHHHHHHh--cccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCc
Confidence 222333322 2246677778899999999999999999999998873
No 18
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-43 Score=365.70 Aligned_cols=252 Identities=25% Similarity=0.417 Sum_probs=215.7
Q ss_pred HhcCCCccceeccCCCcEEEEEE-EcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
....|.....||+|+.|.||.|. ..+++.||||++..... ...+-+++|+.+|+..+|+|||++++.|...+.+|+|
T Consensus 271 P~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q--~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVV 348 (550)
T KOG0578|consen 271 PRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQ--PKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVV 348 (550)
T ss_pred hhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccC--CchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEE
Confidence 44567778899999999999994 55789999999975542 2345678999999999999999999999888999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
||||+||+|.|.+. ...+++.++..|+++++.||+|||.+ +|+|||||.+|||++.+|.+||+|||++..+.
T Consensus 349 MEym~ggsLTDvVt-----~~~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~ 420 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVT-----KTRMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQIS 420 (550)
T ss_pred EeecCCCchhhhhh-----cccccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccc
Confidence 99999999999996 56699999999999999999999999 99999999999999999999999999988765
Q ss_pred CCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
.... .....+|||.|||||++....|++++||||||++++||+.|++||...++.....++ +. .
T Consensus 421 ~~~~-KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLI-------------a~--n 484 (550)
T KOG0578|consen 421 EEQS-KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI-------------AT--N 484 (550)
T ss_pred cccC-ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHH-------------hh--c
Confidence 5433 445678999999999999999999999999999999999999999875543222111 11 1
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.......+...+..+.+|+.+||+.||++|++++|+|++
T Consensus 485 g~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 485 GTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred CCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 223334567788899999999999999999999999987
No 19
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-42 Score=350.04 Aligned_cols=264 Identities=26% Similarity=0.400 Sum_probs=212.6
Q ss_pred HhcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
..+.|+..++||.|..++||+|+. +.++.||||++.-+..... .+.+.+|++.++.++||||++++..|..+..+|+|
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvV 102 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVV 102 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEe
Confidence 346788899999999999999954 5789999999987765543 78899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|.||.+|++.++++..- ...+++..+..|++++++||.|||.+ |.||||||+.||||+.+|.+||+|||.+..+.
T Consensus 103 mpfMa~GS~ldIik~~~--~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~ 177 (516)
T KOG0582|consen 103 MPFMAGGSLLDIIKTYY--PDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLF 177 (516)
T ss_pred ehhhcCCcHHHHHHHHc--cccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeec
Confidence 99999999999998543 34599999999999999999999999 99999999999999999999999999876554
Q ss_pred CCCccc--c-ccccccccccCcccccc--CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHH
Q 005001 567 NTERQV--S-TQMVGAFGYSAPEFALS--GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDAL 641 (720)
Q Consensus 567 ~~~~~~--~-~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (720)
..+... . ..++||+.|||||++.. ..|+.|+||||||++..||.+|..||....+.......--..+......
T Consensus 178 ~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~-- 255 (516)
T KOG0582|consen 178 DSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTS-- 255 (516)
T ss_pred ccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccc--
Confidence 333211 1 45689999999999654 4599999999999999999999999987766433222111111100000
Q ss_pred HhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 642 AKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.............+.+++..||++||++|||+++++++
T Consensus 256 ------~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 256 ------GLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred ------cCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 00000111234478999999999999999999999875
No 20
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-43 Score=355.09 Aligned_cols=256 Identities=29% Similarity=0.439 Sum_probs=208.3
Q ss_pred cCCCccceeccCCCcEEEEEEEcC-CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecC--eEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG--QRLLV 486 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lV 486 (720)
.+|...+.||+|+||.||++...+ |...|||.+..... ...+.+.+|+.+|.+++|||||+++|.....+ .+++.
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~--~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~ 94 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDS--PTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIF 94 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccc--hhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEee
Confidence 356777899999999999997764 89999999976522 22667889999999999999999999855544 68999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC-CCceEEcccCCCccC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD-ELNPHLSDCGLAALT 565 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~ 565 (720)
|||+++|+|.+++... ++.+++..+..+.+||++||+|||++ +||||||||+|||++. ++.+||+|||++...
T Consensus 95 mEy~~~GsL~~~~~~~---g~~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~ 168 (313)
T KOG0198|consen 95 MEYAPGGSLSDLIKRY---GGKLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKL 168 (313)
T ss_pred eeccCCCcHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcccccc
Confidence 9999999999999842 22799999999999999999999999 9999999999999999 799999999999876
Q ss_pred CC--CCccccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 566 PN--TERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 566 ~~--~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
.. ..........||+.|||||++..+ ....++|||||||++.||+||+.||.... .....+.
T Consensus 169 ~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~---------------~~~~~~~ 233 (313)
T KOG0198|consen 169 ESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFF---------------EEAEALL 233 (313)
T ss_pred ccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhc---------------chHHHHH
Confidence 53 222233457899999999999953 34469999999999999999999997530 0011112
Q ss_pred hhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 005001 643 KMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVR 688 (720)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~ 688 (720)
++.........|...+.+..+++.+|+..||++||||.+++++..-
T Consensus 234 ~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~ 279 (313)
T KOG0198|consen 234 LIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFL 279 (313)
T ss_pred HHhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhh
Confidence 2222222235677788899999999999999999999999988643
No 21
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-42 Score=332.13 Aligned_cols=238 Identities=26% Similarity=0.405 Sum_probs=210.4
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.+|+..+.||.|+||.|.+++.+ +|..+|+|++.+... ...+.+...+|..+++.+.||+++++++.+.+.+..++||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 56888899999999999999775 588899999976543 4455677788999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||++||.|..+++ ..+++++..++-++.||+.||+|||+. +|++|||||+|||+|.+|.+||+|||+|+....
T Consensus 124 eyv~GGElFS~Lr----k~~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~ 196 (355)
T KOG0616|consen 124 EYVPGGELFSYLR----KSGRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG 196 (355)
T ss_pred eccCCccHHHHHH----hcCCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecC
Confidence 9999999999998 467899999999999999999999999 999999999999999999999999999987654
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
. ....+|||.|+|||++....|..++|.|||||++|||+.|.+||...++. ....+++..
T Consensus 197 r----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~----------------~iY~KI~~~ 256 (355)
T KOG0616|consen 197 R----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPI----------------QIYEKILEG 256 (355)
T ss_pred c----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChH----------------HHHHHHHhC
Confidence 3 34579999999999999999999999999999999999999999876542 334444444
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCC
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFR 676 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~R 676 (720)
.. .+|.....++.+|+...|+.|-.+|
T Consensus 257 ~v--~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 257 KV--KFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred cc--cCCcccCHHHHHHHHHHHhhhhHhh
Confidence 33 4677888889999999999999999
No 22
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-41 Score=355.51 Aligned_cols=269 Identities=25% Similarity=0.418 Sum_probs=221.0
Q ss_pred hhcHHHHhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecC
Q 005001 402 VASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG 481 (720)
Q Consensus 402 ~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 481 (720)
..+++...+++.+.+.||+|.||+||+|.+. ..||||++.......+..+.|+.|+.++++-+|.||+-+.||+...+
T Consensus 384 ~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~ 461 (678)
T KOG0193|consen 384 LEEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP 461 (678)
T ss_pred ccccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc
Confidence 3677777888889999999999999999985 45899999988888888999999999999999999999999998887
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCC
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 561 (720)
. .||+.+|+|.+|+.++|.. ...+...+.+.|++||++|+.|||.+ +|||||||..||++.++++|||+|||+
T Consensus 462 ~-AIiTqwCeGsSLY~hlHv~---etkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGL 534 (678)
T KOG0193|consen 462 L-AIITQWCEGSSLYTHLHVQ---ETKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGL 534 (678)
T ss_pred e-eeeehhccCchhhhhccch---hhhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccc
Confidence 7 9999999999999999953 47789999999999999999999999 999999999999999999999999999
Q ss_pred CccCCC-CCccccccccccccccCcccccc---CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcccccc
Q 005001 562 AALTPN-TERQVSTQMVGAFGYSAPEFALS---GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHD 637 (720)
Q Consensus 562 a~~~~~-~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 637 (720)
+..-.. .....-....|...|||||+++. .+|++.+||||||+++|||+||..||....... +-|..
T Consensus 535 atvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dq----IifmV----- 605 (678)
T KOG0193|consen 535 ATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQ----IIFMV----- 605 (678)
T ss_pred eeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhh----eEEEe-----
Confidence 864321 11122233457889999999975 458999999999999999999999998332211 11111
Q ss_pred HHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHh
Q 005001 638 IDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQR 692 (720)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~ 692 (720)
....-+.+ .......++.++.+|+..||..++++||.+.+|+..|+++...
T Consensus 606 -GrG~l~pd---~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 606 -GRGYLMPD---LSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred -cccccCcc---chhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 00000000 1122346788999999999999999999999999999998774
No 23
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-41 Score=351.49 Aligned_cols=265 Identities=24% Similarity=0.370 Sum_probs=218.6
Q ss_pred HHHhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 406 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
+-+.......++||+|-||+|.+++...+..||||+++... ......+|.+|+++|.+++||||++++|+|..++.+++
T Consensus 534 EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a-~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicm 612 (807)
T KOG1094|consen 534 EFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDA-TKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCM 612 (807)
T ss_pred hcchhheehhhhhcCcccceeEEEEecCceEEEEeecCccc-chhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHH
Confidence 33455677888999999999999999888999999998665 34456889999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
|+|||++|+|.+++..... ....-....+|+.||+.|++||.+. ++|||||.++|+|++.++++||+|||+++.+
T Consensus 613 I~EYmEnGDLnqFl~ahea--pt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~l 687 (807)
T KOG1094|consen 613 ITEYMENGDLNQFLSAHEL--PTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNL 687 (807)
T ss_pred HHHHHhcCcHHHHHHhccC--cccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCccccccc
Confidence 9999999999999975432 2245566778999999999999999 9999999999999999999999999999976
Q ss_pred CCCCcccc-ccccccccccCccccccCCCcccchhhhHHHHHHHHHh--CCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 566 PNTERQVS-TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT--GRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 566 ~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
...+.+.. ...+-+.+|||+|.+.-++++.++|||+||+++||+++ ...||......+... ..-
T Consensus 688 ysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vve-------------n~~ 754 (807)
T KOG1094|consen 688 YSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVE-------------NAG 754 (807)
T ss_pred ccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHH-------------hhh
Confidence 65554433 34466789999999999999999999999999999887 788987654322111 011
Q ss_pred hhccc---ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 005001 643 KMVDP---ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRL 689 (720)
Q Consensus 643 ~~~~~---~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~ 689 (720)
.+.+. ......|.-++..++++|..||..|-++||+++++...|.+.
T Consensus 755 ~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 755 EFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred hhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 11111 112234677899999999999999999999999999888664
No 24
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-42 Score=387.16 Aligned_cols=263 Identities=29% Similarity=0.490 Sum_probs=223.2
Q ss_pred cCCCccceeccCCCcEEEEEEEcC--Cc----EEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFAN--GK----IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~~--~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (720)
......+.||+|+||.||.|...+ |. .||+|.+.... +.++..+|++|..+|+.++|||||+++|++.+.+..
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~-~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS-SEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence 344567789999999999997653 33 48999997543 677889999999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccC
Q 005001 484 LLVYEYVGNGNLHDMLHFADDS---SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 560 (720)
+|++|||.+|+|..+|+..+.. ...++..+.+.++.|||+|+.||+++ ++|||||.++|+|++....+||+|||
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDFG 847 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADFG 847 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEcccc
Confidence 9999999999999999854321 45689999999999999999999999 99999999999999999999999999
Q ss_pred CCccCCCCCccccccc-cccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccH
Q 005001 561 LAALTPNTERQVSTQM-VGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDI 638 (720)
Q Consensus 561 ~a~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 638 (720)
+|+.....+.+..... .-...|||||.+..+.++.|+|||||||++||++| |..||...+..
T Consensus 848 lArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~---------------- 911 (1025)
T KOG1095|consen 848 LARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNF---------------- 911 (1025)
T ss_pred hhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchH----------------
Confidence 9995554444433333 34568999999999999999999999999999999 99999765432
Q ss_pred HHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 639 DALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
+.+...+..+ +...|..|++.++++|.+||+.+|++||++..|++++.++.+..
T Consensus 912 ~v~~~~~~gg-RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 912 EVLLDVLEGG-RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred HHHHHHHhCC-ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 2233233334 67789999999999999999999999999999999998887643
No 25
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=2.9e-42 Score=355.71 Aligned_cols=249 Identities=27% Similarity=0.418 Sum_probs=217.5
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
++|.+.+.||+|.||.||+|+.+ +.+.||+|.+.+......+.+.+.+|+++++.++||||+.++++|+...++++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 56888889999999999999655 68899999998887788888999999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+.| +|+.++. ..+.++++.+..++.|++.||.|||+. +|+|||+||+|||++.+|.+|++|||+|+.+..
T Consensus 82 ~a~g-~L~~il~----~d~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~- 152 (808)
T KOG0597|consen 82 YAVG-DLFTILE----QDGKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMST- 152 (808)
T ss_pred hhhh-hHHHHHH----hccCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhccc-
Confidence 9987 9999997 468899999999999999999999999 999999999999999999999999999987754
Q ss_pred CccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccc
Q 005001 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPA 648 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (720)
....-+...|||-|||||++.+++|+..+|+||+||++|||++|++||.... +. ..+..+....
T Consensus 153 ~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s------i~----------~Lv~~I~~d~ 216 (808)
T KOG0597|consen 153 NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS------IT----------QLVKSILKDP 216 (808)
T ss_pred CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH------HH----------HHHHHHhcCC
Confidence 3344456789999999999999999999999999999999999999997422 11 1112222222
Q ss_pred cCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 649 LNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 649 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
...|...+..+..+++..|.+||.+|.+..+++.+
T Consensus 217 --v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 217 --VKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred --CCCcccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 12455778889999999999999999999999976
No 26
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.2e-41 Score=361.56 Aligned_cols=265 Identities=25% Similarity=0.435 Sum_probs=210.3
Q ss_pred HhcCCCccceeccCCCcEEEEEEE------cCCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEeec
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEF------ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEH 480 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 480 (720)
..++|++.+.||+|+||.||+|.+ .++..||+|++.... .......+.+|+.++..+ +||||+++++++...
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA-TASEHKALMSELKILIHIGNHLNVVNLLGACTKP 83 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc-chHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence 456799999999999999999964 235689999987543 334456789999999999 899999999988764
Q ss_pred -CeEEEEEEecCCCCHHHHhhhccCC------------------------------------------------------
Q 005001 481 -GQRLLVYEYVGNGNLHDMLHFADDS------------------------------------------------------ 505 (720)
Q Consensus 481 -~~~~lV~e~~~~gsL~~~l~~~~~~------------------------------------------------------ 505 (720)
+..++||||+++|+|.++++.....
T Consensus 84 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (338)
T cd05102 84 NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQET 163 (338)
T ss_pred CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhc
Confidence 4689999999999999998743210
Q ss_pred ----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccc-cccccccc
Q 005001 506 ----SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV-STQMVGAF 580 (720)
Q Consensus 506 ----~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~ 580 (720)
...+++.++..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++......... .....+++
T Consensus 164 ~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~ 240 (338)
T cd05102 164 DDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPL 240 (338)
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCc
Confidence 13478889999999999999999999 99999999999999999999999999997653322211 12234678
Q ss_pred cccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCCChhHHH
Q 005001 581 GYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLS 659 (720)
Q Consensus 581 ~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (720)
.|+|||++.+..++.++|||||||++|||++ |..||........ ....+........+...+.
T Consensus 241 ~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~ 304 (338)
T cd05102 241 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE----------------FCQRLKDGTRMRAPENATP 304 (338)
T ss_pred cccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH----------------HHHHHhcCCCCCCCCCCCH
Confidence 8999999999999999999999999999997 9999976432111 0011111111223445667
Q ss_pred HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHh
Q 005001 660 RFADIIALCVQPEPEFRPPMSEVVQALVRLVQR 692 (720)
Q Consensus 660 ~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~ 692 (720)
.+.+++.+||+.||++||++.|+++.|++++++
T Consensus 305 ~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 305 EIYRIMLACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 899999999999999999999999999998764
No 27
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.3e-41 Score=351.81 Aligned_cols=255 Identities=25% Similarity=0.362 Sum_probs=209.1
Q ss_pred HhcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
..++|+.+..||+|+||+||+|+- .+|+.+|+|++++... ...+.+..+.|-.+|...++|+||+++..|.+.+.+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 457899999999999999999965 4699999999987654 45556778889999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
||||++||++..+|. ..+.+++..+..++.+++-|++.+|+. |+|||||||+|+|||..|++||+|||++.-+
T Consensus 219 iMEylPGGD~mTLL~----~~~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl 291 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLM----RKDTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGL 291 (550)
T ss_pred EEEecCCccHHHHHH----hcCcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchh
Confidence 999999999999996 468999999999999999999999999 9999999999999999999999999998422
Q ss_pred CC----------------------CCcc-----cc-------------------ccccccccccCccccccCCCcccchh
Q 005001 566 PN----------------------TERQ-----VS-------------------TQMVGAFGYSAPEFALSGIYTVKSDV 599 (720)
Q Consensus 566 ~~----------------------~~~~-----~~-------------------~~~~gt~~y~aPE~~~~~~~~~~~Dv 599 (720)
.. .+.. .. ...+|||.|||||++.+..|+..+|+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDw 371 (550)
T KOG0605|consen 292 DKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDW 371 (550)
T ss_pred hhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccH
Confidence 11 0000 00 12579999999999999999999999
Q ss_pred hhHHHHHHHHHhCCCCCCCCCCcchhh-HHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCC
Q 005001 600 YSFGVVMLELLTGRKPLDSSRPRSEQS-LVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPP 678 (720)
Q Consensus 600 wSlGv~l~elltg~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 678 (720)
||||||+|||+.|.+||.+..+..... ++.|.. .+..+.......+..+||.+|+. ||++|..
T Consensus 372 WSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~---------------~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 372 WSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRE---------------TLKFPEEVDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhh---------------hccCCCcCcccHHHHHHHHHHhc-CHHHhcC
Confidence 999999999999999999887754322 222211 11111122344778899999999 9999975
Q ss_pred ---HHHHHHH
Q 005001 679 ---MSEVVQA 685 (720)
Q Consensus 679 ---~~ell~~ 685 (720)
++||.++
T Consensus 436 ~~G~~EIK~H 445 (550)
T KOG0605|consen 436 SKGAEEIKKH 445 (550)
T ss_pred cccHHHHhcC
Confidence 5555544
No 28
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-41 Score=357.69 Aligned_cols=251 Identities=30% Similarity=0.458 Sum_probs=210.7
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccC---hHHHHHHHHHHHHhhcCC-CCCccccceEEeecCe
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS---LQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHGQ 482 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~ 482 (720)
....|...+.||+|+||.|+.|.+. +++.||+|.+...... ....+.+.+|+.++++++ ||||+++++++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 4567899999999999999999654 6899999977654222 123456668999999998 9999999999999999
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCC-CceEEcccCC
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE-LNPHLSDCGL 561 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~-~~~kl~Dfg~ 561 (720)
.++||||+.||+|.+++. ..+++.+.++..+++|++.|++|+|++ +|+||||||+|||++.+ +.+||+|||+
T Consensus 95 ~~ivmEy~~gGdL~~~i~----~~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~ 167 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIV----NKGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGL 167 (370)
T ss_pred EEEEEEecCCccHHHHHH----HcCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEecccc
Confidence 999999999999999997 268899999999999999999999999 99999999999999999 9999999999
Q ss_pred CccCCCCCccccccccccccccCccccccCC-Cc-ccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHH
Q 005001 562 AALTPNTERQVSTQMVGAFGYSAPEFALSGI-YT-VKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDID 639 (720)
Q Consensus 562 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 639 (720)
+.... .........+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||+......
T Consensus 168 s~~~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~---------------- 230 (370)
T KOG0583|consen 168 SAISP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPN---------------- 230 (370)
T ss_pred ccccC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHH----------------
Confidence 98774 2334456689999999999999987 86 78999999999999999999998643211
Q ss_pred HHHhhcccccCCCCChhH-HHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 005001 640 ALAKMVDPALNGMYPAKS-LSRFADIIALCVQPEPEFRPPMSEVVQ 684 (720)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~-~~~l~~li~~cl~~dP~~RPs~~ell~ 684 (720)
...++... ...+|... +.++..|+.+|+..||.+|+++.+|++
T Consensus 231 l~~ki~~~--~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 231 LYRKIRKG--EFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred HHHHHhcC--CccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 11111111 12344555 788899999999999999999999993
No 29
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-42 Score=355.38 Aligned_cols=242 Identities=26% Similarity=0.477 Sum_probs=207.1
Q ss_pred CCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEec
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYV 490 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 490 (720)
.....+-||.|+.|.||+|+.+ ++.||||+++.-. ..+++-|++++||||+.+.|+|.....+|||||||
T Consensus 125 ~IsELeWlGSGaQGAVF~Grl~-netVAVKKV~elk---------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfC 194 (904)
T KOG4721|consen 125 EISELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK---------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFC 194 (904)
T ss_pred HhhhhhhhccCcccceeeeecc-CceehhHHHhhhh---------hhhHHHHHhccCcceeeEeeeecCCceeEEeeecc
Confidence 3344567999999999999986 7889999985321 23466689999999999999999999999999999
Q ss_pred CCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCc
Q 005001 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER 570 (720)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 570 (720)
..|-|.+.|+ .+..++......+..+||.|+.|||.+ +|||||||.-||||..+..+||+|||-++...+.
T Consensus 195 a~GqL~~VLk----a~~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~-- 265 (904)
T KOG4721|consen 195 AQGQLYEVLK----AGRPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDK-- 265 (904)
T ss_pred ccccHHHHHh----ccCccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhh--
Confidence 9999999997 578899999999999999999999999 9999999999999999999999999999876554
Q ss_pred cccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccC
Q 005001 571 QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALN 650 (720)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (720)
.....++||..|||||++...+.+.|+|||||||+||||+||..||..-+.. .+.|.. -...+.
T Consensus 266 STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss----AIIwGV------------GsNsL~ 329 (904)
T KOG4721|consen 266 STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS----AIIWGV------------GSNSLH 329 (904)
T ss_pred hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh----eeEEec------------cCCccc
Confidence 3344689999999999999999999999999999999999999999753321 111111 112344
Q ss_pred CCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 005001 651 GMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALV 687 (720)
Q Consensus 651 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~ 687 (720)
...|..+++.+.-|+++||+..|..||++.+|+.+|+
T Consensus 330 LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hld 366 (904)
T KOG4721|consen 330 LPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLD 366 (904)
T ss_pred ccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence 5568889999999999999999999999999999983
No 30
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-42 Score=350.83 Aligned_cols=250 Identities=30% Similarity=0.477 Sum_probs=213.0
Q ss_pred cCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
..|...++||+|.||.||+|.+ ..++.||+|.+..+.. ..+...+.+|+.++..++++||.++++.+..+..++++||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~-~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe 91 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEA-EDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME 91 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhc-chhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence 4577778999999999999954 5789999999976653 3456778899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
||.||++.+.++ .+..+++..+.-++++++.|+.|||++ +.+|||||+.|||+..+|.+|++|||.+......
T Consensus 92 y~~gGsv~~lL~----~~~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~ 164 (467)
T KOG0201|consen 92 YCGGGSVLDLLK----SGNILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNT 164 (467)
T ss_pred HhcCcchhhhhc----cCCCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeech
Confidence 999999999997 345558888888999999999999999 9999999999999999999999999999877654
Q ss_pred CccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccc
Q 005001 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPA 648 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (720)
... ...++|||.|||||++....|+.|+||||||++.+||.+|.+|+....+.....++. +-..+.
T Consensus 165 ~~r-r~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIp-------------k~~PP~ 230 (467)
T KOG0201|consen 165 VKR-RKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIP-------------KSAPPR 230 (467)
T ss_pred hhc-cccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEecc-------------CCCCCc
Confidence 433 367899999999999999899999999999999999999999998776643222221 111222
Q ss_pred cCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 649 LNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 649 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+. ..++..+.+|+..||.+||+.||+|.+++++
T Consensus 231 L~----~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 231 LD----GDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred cc----cccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 22 2456678999999999999999999999976
No 31
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.2e-41 Score=356.38 Aligned_cols=250 Identities=27% Similarity=0.406 Sum_probs=214.3
Q ss_pred cCCCccceeccCCCcEEEEEEE-cCCcEEEEEEcccc-ccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNA-ALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.-|...+.||+|+.|.|.+|++ .+|+.+|||++.+. .........+.+|+-+|+.+.||||+++++.++++.++|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 3477888999999999999976 57999999999765 334444667889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++|.|++++- ..+++++.++.+++.||+.|+.|+|.. +|+|||+||+|+|+|..+.+||+|||+|....+
T Consensus 92 Eyv~gGELFdylv----~kG~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~ 164 (786)
T KOG0588|consen 92 EYVPGGELFDYLV----RKGPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEVP 164 (786)
T ss_pred EecCCchhHHHHH----hhCCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecccC
Confidence 9999999999996 468999999999999999999999999 999999999999999999999999999976543
Q ss_pred CCccccccccccccccCccccccCCC-cccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIY-TVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
. ..-..-||+|.|.|||++.|.+| +.++||||.|||||.|+||+.||+..+-.. .+.++..
T Consensus 165 g--klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~----------------LLlKV~~ 226 (786)
T KOG0588|consen 165 G--KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRV----------------LLLKVQR 226 (786)
T ss_pred C--ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHH----------------HHHHHHc
Confidence 2 23345689999999999999998 578999999999999999999998543221 1222222
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
..+ ..|...+.+.++|+++|+..||++|.|++||+++-
T Consensus 227 G~f--~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 227 GVF--EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHP 264 (786)
T ss_pred Ccc--cCCCcCCHHHHHHHHHHhccCccccccHHHHhhCc
Confidence 222 24567788899999999999999999999999984
No 32
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-41 Score=356.83 Aligned_cols=246 Identities=24% Similarity=0.370 Sum_probs=210.5
Q ss_pred HHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeE
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQR 483 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 483 (720)
...++|...++||+|.||+|++|..+ +++.+|||.+++..+ ...+.+..+.|.+++... +||.+++++..|...+++
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence 34567999999999999999999876 578999999987665 555667788888887766 699999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
|+||||+.||++..+.+ .+.+++..+.-++..|+.||.|||++ +|||||||.+|||+|.+|++||+|||+++
T Consensus 445 ~fvmey~~Ggdm~~~~~-----~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcK 516 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHIH-----TDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCK 516 (694)
T ss_pred EEEEEecCCCcEEEEEe-----cccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEeccccccc
Confidence 99999999999655443 58899999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHh
Q 005001 564 LTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAK 643 (720)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (720)
..-..++ ....++|||.|||||++.+..|+.++|+|||||+||||+.|..||.+.++.+ ....
T Consensus 517 e~m~~g~-~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee----------------~Fds 579 (694)
T KOG0694|consen 517 EGMGQGD-RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEE----------------VFDS 579 (694)
T ss_pred ccCCCCC-ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHH----------------HHHH
Confidence 6543333 4566899999999999999999999999999999999999999998765432 2222
Q ss_pred hcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCH
Q 005001 644 MVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPM 679 (720)
Q Consensus 644 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 679 (720)
++.. ...||...+.+...+|+++|..+|++|..+
T Consensus 580 I~~d--~~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 580 IVND--EVRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HhcC--CCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 2222 234677888899999999999999999866
No 33
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-41 Score=341.36 Aligned_cols=265 Identities=23% Similarity=0.347 Sum_probs=214.6
Q ss_pred cchhcHHHHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccCh------------HHHHHHHHHHHHhhcCC
Q 005001 400 YTVASLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL------------QEEDNFLEAVSNMSRLR 466 (720)
Q Consensus 400 ~~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~------------~~~~~~~~e~~~l~~l~ 466 (720)
+.-.+.....|+|++.+.||+|.||.|-+|+.. +++.||||++.+..... ...+...+|+.+|++++
T Consensus 87 ~~~~~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~ 166 (576)
T KOG0585|consen 87 YDDDQDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLH 166 (576)
T ss_pred ecCcccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcC
Confidence 334445566789999999999999999999765 68999999996543211 12357789999999999
Q ss_pred CCCccccceEEee--cCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCC
Q 005001 467 HPNIVTLAGYCAE--HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSA 544 (720)
Q Consensus 467 h~niv~l~~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~ 544 (720)
|||||+|+++..+ .+..|||+|||..|.+...- .....+++.+++++++++..||+|||.+ +||||||||+
T Consensus 167 H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p----~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPs 239 (576)
T KOG0585|consen 167 HPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCP----PDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPS 239 (576)
T ss_pred CcCeeEEEEeecCcccCceEEEEEeccCCccccCC----CCcccccHHHHHHHHHHHHHHHHHHHhc---Ceeccccchh
Confidence 9999999999876 46889999999998875432 2223399999999999999999999999 9999999999
Q ss_pred CEEeCCCCceEEcccCCCccCCCCC----ccccccccccccccCccccccCC----CcccchhhhHHHHHHHHHhCCCCC
Q 005001 545 NILLDDELNPHLSDCGLAALTPNTE----RQVSTQMVGAFGYSAPEFALSGI----YTVKSDVYSFGVVMLELLTGRKPL 616 (720)
Q Consensus 545 NIll~~~~~~kl~Dfg~a~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlGv~l~elltg~~pf 616 (720)
|+|++++|++||+|||.+...+... +..-...+|||.|+|||...++. .+.+.||||+||+||-|+.|+.||
T Consensus 240 NLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF 319 (576)
T KOG0585|consen 240 NLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPF 319 (576)
T ss_pred heEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCc
Confidence 9999999999999999987663321 11123468999999999998743 357899999999999999999999
Q ss_pred CCCCCcchhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 005001 617 DSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALV 687 (720)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~ 687 (720)
.+... .+...+++...+......+..+.+.+||.++|++||+.|.+..+|..+..
T Consensus 320 ~~~~~----------------~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpw 374 (576)
T KOG0585|consen 320 FDDFE----------------LELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPW 374 (576)
T ss_pred ccchH----------------HHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecce
Confidence 76432 34455666666655544556788999999999999999999999988763
No 34
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-41 Score=355.35 Aligned_cols=263 Identities=28% Similarity=0.474 Sum_probs=221.9
Q ss_pred HhcCCCccceeccCCCcEEEEEEEcC--C--cE-EEEEEccc-cccChHHHHHHHHHHHHhhcCCCCCccccceEEeecC
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFAN--G--KI-MAVKKIDN-AALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG 481 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~~--~--~~-vavK~~~~-~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 481 (720)
..++....++||+|+||+||+|.+.. + .. ||+|..+. .........+|++|+++|++++|||||+++|+...+.
T Consensus 155 ~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~ 234 (474)
T KOG0194|consen 155 SHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEE 234 (474)
T ss_pred eccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC
Confidence 34445556899999999999997653 2 23 89999985 3356778899999999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCC
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 561 (720)
.+++|||+|.||+|.++|+. ....++..++..++.+.|.||+|||+. ++|||||.++|+|++.++.+||+|||+
T Consensus 235 Pl~ivmEl~~gGsL~~~L~k---~~~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGL 308 (474)
T KOG0194|consen 235 PLMLVMELCNGGSLDDYLKK---NKKSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGL 308 (474)
T ss_pred ccEEEEEecCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCcccc
Confidence 99999999999999999983 234699999999999999999999999 999999999999999999999999999
Q ss_pred CccCCCCCccccc-cccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHH
Q 005001 562 AALTPNTERQVST-QMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDID 639 (720)
Q Consensus 562 a~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 639 (720)
++..... .... ..--+..|+|||.+..+.|++++|||||||++||+++ |..||.+.... .
T Consensus 309 s~~~~~~--~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~----------------~ 370 (474)
T KOG0194|consen 309 SRAGSQY--VMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY----------------E 370 (474)
T ss_pred ccCCcce--eeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH----------------H
Confidence 8764311 1111 1124578999999999999999999999999999999 88999875532 2
Q ss_pred HHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhc
Q 005001 640 ALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRAS 694 (720)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 694 (720)
...++.....+...+...+..+..++.+||..||++||+|.++.+.|+.+.+...
T Consensus 371 v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 371 VKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred HHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 2333335566667777889999999999999999999999999999999887755
No 35
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.8e-41 Score=329.04 Aligned_cols=269 Identities=24% Similarity=0.314 Sum_probs=213.9
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEee--cCeEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE--HGQRLL 485 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~l 485 (720)
.++|+..+.|++|+||.||+|+++ +++.||+|+++...-.......-++|+.++.+++|||||.+..+... -+..|+
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 356888999999999999999765 68999999998655333334567899999999999999999888754 467999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
|||||+. +|..+++. ..+++...+++-+..|+++|++|||.. .|+|||||++|+|++..|.+||+|||+|+.+
T Consensus 155 VMe~~Eh-DLksl~d~---m~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~y 227 (419)
T KOG0663|consen 155 VMEYVEH-DLKSLMET---MKQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREY 227 (419)
T ss_pred eHHHHHh-hHHHHHHh---ccCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhh
Confidence 9999987 99999974 357899999999999999999999999 9999999999999999999999999999988
Q ss_pred CCCCccccccccccccccCccccccCC-CcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHH--hhccc---cccHH
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFALSGI-YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVR--WATPQ---LHDID 639 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~--~~~~~---~~~~~ 639 (720)
..... ..+..+-|..|+|||++.+.+ |+.++|+||+|||+.||+++++-|.+..+.+....+- ...|. |....
T Consensus 228 gsp~k-~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~ 306 (419)
T KOG0663|consen 228 GSPLK-PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYS 306 (419)
T ss_pred cCCcc-cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcc
Confidence 76543 345567899999999999855 9999999999999999999999998877655443331 11221 11111
Q ss_pred HHH---hhc-----ccccCCCCChh-HHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 640 ALA---KMV-----DPALNGMYPAK-SLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 640 ~~~---~~~-----~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.+. ++. ...++..++.. ..+.-++|+..+|..||.+|.|++|.+++
T Consensus 307 ~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 307 ELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred ccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 111 110 01122223322 44677899999999999999999999976
No 36
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3e-40 Score=344.32 Aligned_cols=269 Identities=21% Similarity=0.290 Sum_probs=208.1
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
++|+..+.||+|+||.||+|.+. +++.||+|++............+.+|+.+++.++||||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 46889999999999999999876 57889999997654444456678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|++++.+..+.+ ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~~~l~~~~~----~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 153 (287)
T cd07848 81 YVEKNMLELLEE----MPNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEG 153 (287)
T ss_pred cCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccccc
Confidence 999877765543 245789999999999999999999999 9999999999999999999999999999876443
Q ss_pred CccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHH--------
Q 005001 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDA-------- 640 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~-------- 640 (720)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||...........+............
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07848 154 SNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPR 233 (287)
T ss_pred ccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccch
Confidence 332333457899999999999999999999999999999999999999865433222111111101000000
Q ss_pred HHhhcccccC------CCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 641 LAKMVDPALN------GMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 641 ~~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
......+... .......+..+.+|+++||+.||++|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 234 FHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred hcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000000 00111245679999999999999999999999864
No 37
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=8.2e-40 Score=339.93 Aligned_cols=247 Identities=21% Similarity=0.351 Sum_probs=203.2
Q ss_pred ceeccCCCcEEEEEEEcCCcEEEEEEccccccCh-HHHHHHHHHHHHhhcCCCCCccccceEEee----cCeEEEEEEec
Q 005001 416 FLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSL-QEEDNFLEAVSNMSRLRHPNIVTLAGYCAE----HGQRLLVYEYV 490 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lV~e~~ 490 (720)
..||+|++|.||+|.. +|+.||+|++....... ...+.+.+|+.++++++||||+++++++.+ ....++||||+
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 5799999999999988 68999999997654322 224678899999999999999999999876 34689999999
Q ss_pred CCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCc
Q 005001 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER 570 (720)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 570 (720)
++|+|.++++. .+.+++..+.+++.|++.||.|||+.. +++||||||+||++++++.+||+|||+++......
T Consensus 105 ~~g~L~~~l~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~- 177 (283)
T PHA02988 105 TRGYLREVLDK----EKDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP- 177 (283)
T ss_pred CCCcHHHHHhh----CCCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcccc-
Confidence 99999999973 457899999999999999999999842 78899999999999999999999999987653321
Q ss_pred cccccccccccccCcccccc--CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccc
Q 005001 571 QVSTQMVGAFGYSAPEFALS--GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPA 648 (720)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (720)
....|+..|+|||++.+ ..++.++|||||||++|||++|+.||........ ........
T Consensus 178 ---~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~----------------~~~i~~~~ 238 (283)
T PHA02988 178 ---FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEI----------------YDLIINKN 238 (283)
T ss_pred ---ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHH----------------HHHHHhcC
Confidence 23468899999999976 6799999999999999999999999976432211 11111122
Q ss_pred cCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 005001 649 LNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRL 689 (720)
Q Consensus 649 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~ 689 (720)
.....+..++..+.+++.+||+.||++||+++|+++.|+.+
T Consensus 239 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 239 NSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY 279 (283)
T ss_pred CCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 22234445778899999999999999999999999999875
No 38
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=7.1e-40 Score=337.59 Aligned_cols=257 Identities=23% Similarity=0.364 Sum_probs=208.8
Q ss_pred hcCCCccceeccCCCcEEEEEEEc----CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (720)
.++|+..+.||+|+||.||+|.++ .+..||+|.++... .......+.+|+..+++++||||+++++++..++..+
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 82 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC-SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMM 82 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcE
Confidence 356888899999999999999753 35689999997643 3344567899999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
+||||+++|+|.+++.. ....+++.+++.++.|++.||+|||+. +++||||||+||+++.++.++++|||.+..
T Consensus 83 lv~e~~~~~~L~~~l~~---~~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~ 156 (266)
T cd05064 83 IVTEYMSNGALDSFLRK---HEGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQE 156 (266)
T ss_pred EEEEeCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCccccc
Confidence 99999999999999873 235789999999999999999999999 999999999999999999999999998765
Q ss_pred CCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHh
Q 005001 565 TPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAK 643 (720)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (720)
.............++..|+|||.+.+..++.++|||||||++||+++ |..||........ . +
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~----------------~-~ 219 (266)
T cd05064 157 DKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDV----------------I-K 219 (266)
T ss_pred ccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHH----------------H-H
Confidence 32221111122345678999999999999999999999999999875 9999975432111 1 1
Q ss_pred hcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 005001 644 MVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRL 689 (720)
Q Consensus 644 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~ 689 (720)
.+........+..++..+.+++.+||+.+|++||++++|++.|.++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 220 AVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred HHHCCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 1111112233556777899999999999999999999999998765
No 39
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-40 Score=346.79 Aligned_cols=253 Identities=26% Similarity=0.415 Sum_probs=222.2
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCe-EEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ-RLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-~~lV~ 487 (720)
++|...+.+|+|+||.++.++++ +++.|++|++........+......|+.++++++|||||.+.+.|.+++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 56888999999999999999765 57899999998887777777788999999999999999999999999998 99999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
+|++||+|.+.+...+ +..++++.+.+++.|++.|+.|||+. .|+|||||+.||+++.++.+||+|||+|+....
T Consensus 84 ~Y~eGg~l~~~i~~~k--~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK--GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNP 158 (426)
T ss_pred eecCCCCHHHHHHHHh--hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCC
Confidence 9999999999998543 57899999999999999999999988 999999999999999999999999999998876
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
.. ......+||+.||.||++.+.+|..|+|||||||++|||++-+.+|.+.+.. ....++..
T Consensus 159 ~~-~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~----------------~Li~ki~~- 220 (426)
T KOG0589|consen 159 ED-SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMS----------------ELILKINR- 220 (426)
T ss_pred ch-hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchH----------------HHHHHHhh-
Confidence 54 2445678999999999999999999999999999999999999999865432 11222222
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
......|.....++..+|..|++.+|+.||++.+++.+
T Consensus 221 ~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 221 GLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 22344567788899999999999999999999999987
No 40
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8e-41 Score=312.26 Aligned_cols=252 Identities=26% Similarity=0.379 Sum_probs=215.6
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
..++|+..+.||+|.||.||.|+.+ ++-.||+|++.+... ......++.+|+++.+.++||||++++++|.+....|+
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL 99 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL 99 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence 4467889999999999999999654 678899999976654 33446788999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
++||..+|+|...++. .....+++..+..++.|+|.||.|+|.. +||||||||+|+|++..+.+||+|||-+...
T Consensus 100 ilEya~~gel~k~L~~--~~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~ 174 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQE--GRMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHA 174 (281)
T ss_pred EEEecCCchHHHHHHh--cccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeec
Confidence 9999999999999973 2356788999999999999999999999 9999999999999999999999999998765
Q ss_pred CCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
+ .......+||..|.+||...+..++..+|+|++|++.||++.|.+||...... +...++.
T Consensus 175 p---~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~----------------etYkrI~ 235 (281)
T KOG0580|consen 175 P---SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS----------------ETYKRIR 235 (281)
T ss_pred C---CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhH----------------HHHHHHH
Confidence 4 23445679999999999999999999999999999999999999999864421 2222222
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.. .-.+|...+....++|.+|+.++|.+|.+..|++++
T Consensus 236 k~--~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 236 KV--DLKFPSTISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred Hc--cccCCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 22 223566777888999999999999999999999876
No 41
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-40 Score=328.58 Aligned_cols=268 Identities=25% Similarity=0.370 Sum_probs=214.6
Q ss_pred HhcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEee-----cC
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE-----HG 481 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~~ 481 (720)
....|...+.||+|+||.|+.|.. .+|+.||||++..........++-.+|+.+++.++|+||+.+.+.+.. -.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 345666678999999999999965 478999999998777777778889999999999999999999998755 34
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCC
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 561 (720)
..|+|+|+|+. +|...++ .++.++...+..++.|+++||.|+|+. +|+||||||.|++++.+..+||+|||+
T Consensus 100 DvYiV~elMet-DL~~iik----~~~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGL 171 (359)
T KOG0660|consen 100 DVYLVFELMET-DLHQIIK----SQQDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGL 171 (359)
T ss_pred eeEEehhHHhh-HHHHHHH----cCccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccc
Confidence 67999999954 9999997 345699999999999999999999999 999999999999999999999999999
Q ss_pred CccCCCC-CccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHH
Q 005001 562 AALTPNT-ERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDID 639 (720)
Q Consensus 562 a~~~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 639 (720)
|+..... .....+..+-|..|+|||++.. ..|+.++||||+|||+.||++|++-|.+.+.-....++....+.- ..+
T Consensus 172 AR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP-~~e 250 (359)
T KOG0660|consen 172 ARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTP-SEE 250 (359)
T ss_pred eeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCC-CHH
Confidence 9977542 2234467789999999999865 669999999999999999999999999877554444443222111 111
Q ss_pred HHHhhc--------cc---c----cCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 640 ALAKMV--------DP---A----LNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 640 ~~~~~~--------~~---~----~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.+.++. .. . +...+| .......+|+.+||..||.+|+|++|++++
T Consensus 251 ~l~~i~s~~ar~yi~slp~~p~~~f~~~fp-~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 251 DLQKIRSEKARPYIKSLPQIPKQPFSSIFP-NANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHHhccHHHHHHHHhCCCCCCCCHHHHcC-CCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 111111 10 0 111122 344567899999999999999999999987
No 42
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.2e-39 Score=352.18 Aligned_cols=262 Identities=27% Similarity=0.435 Sum_probs=208.4
Q ss_pred HhcCCCccceeccCCCcEEEEEEE------cCCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEeec
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEF------ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEH 480 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 480 (720)
..++|+..+.||+|+||.||+|.+ .++..||+|+++... .......+.+|+.+++.+ +||||+++++++...
T Consensus 33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~ 111 (375)
T cd05104 33 PRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHINIVNLLGACTVG 111 (375)
T ss_pred chHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc-CcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC
Confidence 355788899999999999999963 245689999987543 234456788999999999 899999999999999
Q ss_pred CeEEEEEEecCCCCHHHHhhhccC--------------------------------------------------------
Q 005001 481 GQRLLVYEYVGNGNLHDMLHFADD-------------------------------------------------------- 504 (720)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 504 (720)
+..++||||+++|+|.++++....
T Consensus 112 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (375)
T cd05104 112 GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRS 191 (375)
T ss_pred CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccc
Confidence 999999999999999999864221
Q ss_pred ---------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 505 ---------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 505 ---------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
....+++..+.+++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 268 (375)
T cd05104 192 GSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDS 268 (375)
T ss_pred ceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCcc
Confidence 112578899999999999999999998 99999999999999999999999999997654332
Q ss_pred ccc-cccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 570 RQV-STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 570 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
... .....++..|+|||++.+..++.++|||||||++|||++ |..||....... ...+.+..
T Consensus 269 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~----------------~~~~~~~~ 332 (375)
T cd05104 269 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS----------------KFYKMIKE 332 (375)
T ss_pred cccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH----------------HHHHHHHh
Confidence 211 112345678999999999999999999999999999998 888987543211 11111111
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRL 689 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~ 689 (720)
......+...+.++.+++.+||+.||++||++.||++.|++.
T Consensus 333 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 333 GYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred CccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 112222334566899999999999999999999999999864
No 43
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.2e-40 Score=328.96 Aligned_cols=251 Identities=24% Similarity=0.390 Sum_probs=213.3
Q ss_pred HhcCCCccceeccCCCcEEEEEE-EcCCcEEEEEEccccccC-hHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
...+|++.+.||+|.||.|-+|. +..|+.||||.+++..+. .++.-.+.+|+++|+.++||||+.++.+|+..+...|
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvi 130 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVI 130 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEE
Confidence 45678899999999999999995 478999999999877664 4455678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
||||..+|.|+|++. ..+.+++.+++++++||..|+.|+|++ +++|||||.+|||+|.++++||+|||++-.+
T Consensus 131 vMEYaS~GeLYDYiS----er~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly 203 (668)
T KOG0611|consen 131 VMEYASGGELYDYIS----ERGSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLY 203 (668)
T ss_pred EEEecCCccHHHHHH----HhccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhh
Confidence 999999999999997 468899999999999999999999999 9999999999999999999999999999776
Q ss_pred CCCCccccccccccccccCccccccCCC-cccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhh
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFALSGIY-TVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKM 644 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (720)
... ..-+.++|+|-|.+||++.+.+| ++.+|-|||||+||-|+.|.+||++.+.. ..++++
T Consensus 204 ~~~--kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk----------------~lvrQI 265 (668)
T KOG0611|consen 204 ADK--KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK----------------RLVRQI 265 (668)
T ss_pred ccc--cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH----------------HHHHHh
Confidence 432 34467899999999999999998 57899999999999999999999975432 112222
Q ss_pred cccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 645 VDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 645 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
-...++. ...+....-||++||..+|++|-|..+|..+-
T Consensus 266 s~GaYrE---P~~PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 266 SRGAYRE---PETPSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred hcccccC---CCCCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 2222222 22334556799999999999999988877653
No 44
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-39 Score=326.47 Aligned_cols=255 Identities=27% Similarity=0.353 Sum_probs=213.8
Q ss_pred cCCCccceeccCCCcEEEEEEEcC-CcEEEEEEccccccC-hHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
+.|+..+.||+|.-|+||+++..+ +..+|+|++.+.... .....+...|-++|+.++||.++.||+.|+.+...|+||
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 456778899999999999998875 588999999876653 334456677889999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
|||+||+|..+.+. +.++.+++..++-++..|+-||+|||-. |||+|||||+||||.++|++.|+||.++.....
T Consensus 157 eyCpGGdL~~Lrqk--Qp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~ 231 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQK--QPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPV 231 (459)
T ss_pred ecCCCccHHHHHhh--CCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCC
Confidence 99999999998874 4678999999999999999999999999 999999999999999999999999998743210
Q ss_pred ---------------------------------C----------------------CccccccccccccccCccccccCC
Q 005001 568 ---------------------------------T----------------------ERQVSTQMVGAFGYSAPEFALSGI 592 (720)
Q Consensus 568 ---------------------------------~----------------------~~~~~~~~~gt~~y~aPE~~~~~~ 592 (720)
. ....+..++||-.|+|||++.+..
T Consensus 232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G 311 (459)
T KOG0610|consen 232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG 311 (459)
T ss_pred CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence 0 001123468999999999999999
Q ss_pred CcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCC
Q 005001 593 YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPE 672 (720)
Q Consensus 593 ~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 672 (720)
.+.++|+|+|||++|||+.|..||.+.+.. +.+..++............+..+.+||++.|.+|
T Consensus 312 HgsAVDWWtfGIflYEmLyG~TPFKG~~~~----------------~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKd 375 (459)
T KOG0610|consen 312 HGSAVDWWTFGIFLYEMLYGTTPFKGSNNK----------------ETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKD 375 (459)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCcCCCCch----------------hhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccC
Confidence 999999999999999999999999986643 3344444444443333466778999999999999
Q ss_pred CCCCCC----HHHHHHH
Q 005001 673 PEFRPP----MSEVVQA 685 (720)
Q Consensus 673 P~~RPs----~~ell~~ 685 (720)
|++|.. +.||-++
T Consensus 376 P~kRlg~~rGA~eIK~H 392 (459)
T KOG0610|consen 376 PSKRLGSKRGAAEIKRH 392 (459)
T ss_pred hhhhhccccchHHhhcC
Confidence 999998 7887765
No 45
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.9e-39 Score=343.85 Aligned_cols=268 Identities=22% Similarity=0.375 Sum_probs=209.2
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.++|+..+.||+|+||.||++.+. ++..||+|.+.... .......+.+|++++++++||||+++++++...+..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEe
Confidence 467999999999999999999776 57889999886542 3344567899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++|+|.++++. ...+++..+..++.|++.||.|||+.+ +|+||||||+|||++.++.+||+|||++.....
T Consensus 83 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 156 (331)
T cd06649 83 EHMDGGSLDQVLKE----AKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (331)
T ss_pred ecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcccccccc
Confidence 99999999999973 456899999999999999999999862 699999999999999999999999999876533
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhc---------------
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWAT--------------- 632 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~--------------- 632 (720)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+....
T Consensus 157 ~---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (331)
T cd06649 157 S---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRP 233 (331)
T ss_pred c---ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCccc
Confidence 2 2234579999999999999999999999999999999999999997544321111110000
Q ss_pred ---------------cccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 633 ---------------PQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 633 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
+.....+....+.............+.++.+|+.+||+.||++||+++|++++-
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~ 302 (331)
T cd06649 234 RPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT 302 (331)
T ss_pred ccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 000000011111111111111123567899999999999999999999999874
No 46
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-40 Score=311.35 Aligned_cols=266 Identities=24% Similarity=0.369 Sum_probs=213.7
Q ss_pred HHhcCCCccceeccCCCcEEEEEE-EcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec-----
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH----- 480 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 480 (720)
...++|++.+.||+|||+-||+++ ..+++.||+|++.-.. .++.+..++|++..++++||||++++++...+
T Consensus 18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~--~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~ 95 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS--QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGK 95 (302)
T ss_pred EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc--hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCc
Confidence 345789999999999999999996 4578999999997543 45677889999999999999999999986443
Q ss_pred CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccC
Q 005001 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (720)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 560 (720)
...|++++|+..|+|.+.++.....+..+++.+.++|+.+|++||++||+. .|.++||||||.|||+.+++.+++.|||
T Consensus 96 ~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~G 174 (302)
T KOG2345|consen 96 HEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLG 174 (302)
T ss_pred eeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEecc
Confidence 358999999999999999988777777899999999999999999999998 2359999999999999999999999999
Q ss_pred CCccCCCCCcccc--------ccccccccccCccccc---cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHH
Q 005001 561 LAALTPNTERQVS--------TQMVGAFGYSAPEFAL---SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVR 629 (720)
Q Consensus 561 ~a~~~~~~~~~~~--------~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~ 629 (720)
.+...+-...... .....|..|+|||.+. +...++++|||||||++|+|+.|..||+..-...
T Consensus 175 S~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~G------ 248 (302)
T KOG2345|consen 175 SATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQG------ 248 (302)
T ss_pred CccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcC------
Confidence 9875442211111 1234788999999986 4557899999999999999999999997532211
Q ss_pred hhccccccHHHHHh-hcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHH
Q 005001 630 WATPQLHDIDALAK-MVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLV 690 (720)
Q Consensus 630 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~ 690 (720)
+.+.- +....+..+.....++.+.+++++|++.||.+||++.+++..+.+++
T Consensus 249 ---------gSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 249 ---------GSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred ---------CeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 00000 11112222223346788999999999999999999999999987754
No 47
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3.5e-39 Score=339.24 Aligned_cols=265 Identities=24% Similarity=0.396 Sum_probs=205.6
Q ss_pred hcCCCccceeccCCCcEEEEEEEcC-----------------CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCcc
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFAN-----------------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 471 (720)
.++|+..+.||+|+||.||+|.+.+ +..||+|.+.... .......+.+|+.++.+++||||+
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv 82 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA-NKNARNDFLKEVKILSRLKDPNII 82 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCee
Confidence 4578889999999999999997532 3469999987543 344466789999999999999999
Q ss_pred ccceEEeecCeEEEEEEecCCCCHHHHhhhccC---------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 005001 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD---------------SSKNLTWNARVRVALGTARALEYLHEVCLPSV 536 (720)
Q Consensus 472 ~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~---------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~i 536 (720)
++++++...+..++||||+++|+|.+++..... ....+++..+.+++.|++.||+|||+. +|
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i 159 (304)
T cd05096 83 RLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NF 159 (304)
T ss_pred EEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Cc
Confidence 999999999999999999999999999864211 113478889999999999999999999 99
Q ss_pred EEecCCCCCEEeCCCCceEEcccCCCccCCCCCcc-ccccccccccccCccccccCCCcccchhhhHHHHHHHHHh--CC
Q 005001 537 VHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT--GR 613 (720)
Q Consensus 537 iH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt--g~ 613 (720)
+||||||+||+++.++.+||+|||+++........ ......++..|+|||++.++.++.++||||||+++|||++ +.
T Consensus 160 vH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~ 239 (304)
T cd05096 160 VHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKE 239 (304)
T ss_pred cccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCC
Confidence 99999999999999999999999999765432221 1223356789999999999999999999999999999987 56
Q ss_pred CCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 005001 614 KPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALV 687 (720)
Q Consensus 614 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~ 687 (720)
.||............ ...............+..++..+.+++.+||+.||++||++.+|.+.|+
T Consensus 240 ~p~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 240 QPYGELTDEQVIENA----------GEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCCCcCCHHHHHHHH----------HHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 777654322111000 0000000001111223456678999999999999999999999998875
No 48
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.5e-39 Score=351.06 Aligned_cols=265 Identities=27% Similarity=0.435 Sum_probs=210.5
Q ss_pred HHHhcCCCccceeccCCCcEEEEEEEc------CCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEe
Q 005001 406 QTATNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCA 478 (720)
Q Consensus 406 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 478 (720)
....++|+..+.||+|+||.||+|... ++..||+|++.... .......+.+|+++++.+ +|+||+++++++.
T Consensus 34 ~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~ 112 (374)
T cd05106 34 EFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA-HTDEREALMSELKILSHLGQHKNIVNLLGACT 112 (374)
T ss_pred cccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC-CHHHHHHHHHHHHHHHhhccCCceeeEeeEec
Confidence 344567899999999999999998642 34579999997543 233456788999999999 8999999999999
Q ss_pred ecCeEEEEEEecCCCCHHHHhhhccC------------------------------------------------------
Q 005001 479 EHGQRLLVYEYVGNGNLHDMLHFADD------------------------------------------------------ 504 (720)
Q Consensus 479 ~~~~~~lV~e~~~~gsL~~~l~~~~~------------------------------------------------------ 504 (720)
..+..++||||+++|+|.++++....
T Consensus 113 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (374)
T cd05106 113 HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSS 192 (374)
T ss_pred CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccc
Confidence 99999999999999999999864211
Q ss_pred ------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCcc-
Q 005001 505 ------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ- 571 (720)
Q Consensus 505 ------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~- 571 (720)
....+++.++.+++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++........
T Consensus 193 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~ 269 (374)
T cd05106 193 QSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYV 269 (374)
T ss_pred ccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCccee
Confidence 113478899999999999999999999 9999999999999999999999999998765332211
Q ss_pred ccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccC
Q 005001 572 VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALN 650 (720)
Q Consensus 572 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (720)
......++..|+|||++.+..++.++|||||||++|||++ |+.||....... ...+.......
T Consensus 270 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~----------------~~~~~~~~~~~ 333 (374)
T cd05106 270 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS----------------KFYKMVKRGYQ 333 (374)
T ss_pred eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH----------------HHHHHHHcccC
Confidence 1122335678999999999999999999999999999997 999997543211 11111111222
Q ss_pred CCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHH
Q 005001 651 GMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLV 690 (720)
Q Consensus 651 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~ 690 (720)
...+...+.++.+++.+||+.||++||++.++++.|++++
T Consensus 334 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 334 MSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred ccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 2233344678999999999999999999999999999875
No 49
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-38 Score=321.35 Aligned_cols=272 Identities=26% Similarity=0.376 Sum_probs=206.7
Q ss_pred CccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhc--CCCCCccccceEEeecC----eEEEE
Q 005001 413 SQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR--LRHPNIVTLAGYCAEHG----QRLLV 486 (720)
Q Consensus 413 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~~~lV 486 (720)
...++||+|.||.||+|.+. ++.||||++. .++.+.|..|-++++. ++|+||++++++-.... .++||
T Consensus 213 ~l~eli~~Grfg~V~KaqL~-~~~VAVKifp-----~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV 286 (534)
T KOG3653|consen 213 QLLELIGRGRFGCVWKAQLD-NRLVAVKIFP-----EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV 286 (534)
T ss_pred hhHHHhhcCccceeehhhcc-CceeEEEecC-----HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence 44568999999999999986 5999999994 5667888888777654 68999999999876554 88999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhc------CCCCcEEecCCCCCEEeCCCCceEEcccC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV------CLPSVVHRNFKSANILLDDELNPHLSDCG 560 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~------~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 560 (720)
++|.+.|+|.+++. ...++|....+|+..+++||+|||+. ++|+|+|||||.+||||..|+++.|+|||
T Consensus 287 t~fh~kGsL~dyL~-----~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFG 361 (534)
T KOG3653|consen 287 TEFHPKGSLCDYLK-----ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFG 361 (534)
T ss_pred eeeccCCcHHHHHH-----hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccc
Confidence 99999999999997 67899999999999999999999976 35789999999999999999999999999
Q ss_pred CCccCCCCC-ccccccccccccccCccccccCCC------cccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcc
Q 005001 561 LAALTPNTE-RQVSTQMVGAFGYSAPEFALSGIY------TVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATP 633 (720)
Q Consensus 561 ~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~------~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~ 633 (720)
+|..+.... .......+||.+|||||++.+..- -.+.||||+|.++|||++...-++.......+.-.+-...
T Consensus 362 LAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG 441 (534)
T KOG3653|consen 362 LALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVG 441 (534)
T ss_pred eeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhc
Confidence 998765322 222334689999999999987542 2368999999999999996665542111111111111111
Q ss_pred ccccHHHHHhhc-ccccCCCCCh-----hHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhcc
Q 005001 634 QLHDIDALAKMV-DPALNGMYPA-----KSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 695 (720)
Q Consensus 634 ~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~~ 695 (720)
.....+.+...+ ..+.+..++. .....+.+.+..||..||+.|.|+.=+.+++.++..-...
T Consensus 442 ~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~ 509 (534)
T KOG3653|consen 442 NHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWED 509 (534)
T ss_pred CCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence 122222222222 2223333333 3456789999999999999999999999999888665543
No 50
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.9e-39 Score=337.93 Aligned_cols=253 Identities=25% Similarity=0.352 Sum_probs=205.7
Q ss_pred CCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccC-hHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 412 FSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 412 y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
|+..+.||+|+||.||+|.. .+|+.||+|.+...... ......+.+|+.++++++|+||+++++++.+.+..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 67788999999999999976 47899999998754332 23345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
+++|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.++|+|||++.......
T Consensus 82 ~~~g~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05631 82 MNGGDLKFHIYNM--GNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE 156 (285)
T ss_pred cCCCcHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC
Confidence 9999999887532 234689999999999999999999999 99999999999999999999999999997654322
Q ss_pred ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccccc
Q 005001 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPAL 649 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (720)
......||+.|+|||++.+..++.++|||||||++|||++|+.||........... ...... ..
T Consensus 157 --~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~-------------~~~~~~-~~ 220 (285)
T cd05631 157 --TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREE-------------VDRRVK-ED 220 (285)
T ss_pred --eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHH-------------HHHHhh-cc
Confidence 22345799999999999999999999999999999999999999986543211111 111110 11
Q ss_pred CCCCChhHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHH
Q 005001 650 NGMYPAKSLSRFADIIALCVQPEPEFRPP-----MSEVVQA 685 (720)
Q Consensus 650 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~ell~~ 685 (720)
...++...+..+.+|+++||+.||++||+ +++++++
T Consensus 221 ~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 221 QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 12234456678899999999999999997 7888865
No 51
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.2e-39 Score=340.53 Aligned_cols=247 Identities=24% Similarity=0.310 Sum_probs=205.3
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
++|+..+.||+|+||.||+|... +++.||+|++..... .......+.+|+.++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36888999999999999999775 688999999864332 2234566888999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++|+|.++++ ..+.+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~ 153 (291)
T cd05612 81 EYVPGGELFSYLR----NSGRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD 153 (291)
T ss_pred eCCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence 9999999999986 245789999999999999999999999 999999999999999999999999999876533
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+...
T Consensus 154 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~----------------~~i~~~ 213 (291)
T cd05612 154 R----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIY----------------EKILAG 213 (291)
T ss_pred C----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH----------------HHHHhC
Confidence 2 12356999999999999999999999999999999999999999764322111 111111
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPP-----MSEVVQA 685 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~ell~~ 685 (720)
. ..++...+..+.+++++||+.||.+||+ +++++++
T Consensus 214 ~--~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 214 K--LEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred C--cCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 1 1234445667889999999999999995 8888876
No 52
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-40 Score=330.50 Aligned_cols=265 Identities=25% Similarity=0.334 Sum_probs=207.1
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecC-----e
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG-----Q 482 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~ 482 (720)
.-+|...+++|.|+||.||+|... +++.||||++-.+. +.-.+|+++|+.++|||||++..+|.... .
T Consensus 23 ~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~------r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ 96 (364)
T KOG0658|consen 23 EISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK------RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVY 96 (364)
T ss_pred EEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC------CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhH
Confidence 345777889999999999999765 47899999986433 22347899999999999999988886532 3
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCC-CceEEcccCC
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE-LNPHLSDCGL 561 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~-~~~kl~Dfg~ 561 (720)
..+|||||+. +|.+.++.....+..++...++-+..|+.+||+|||+. +|+||||||+|+|+|.+ |.+||+|||.
T Consensus 97 lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGS 172 (364)
T KOG0658|consen 97 LNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGS 172 (364)
T ss_pred HHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCc
Confidence 4689999987 99999987666678899999999999999999999998 99999999999999976 8999999999
Q ss_pred CccCCCCCccccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHH--hhccccccH
Q 005001 562 AALTPNTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVR--WATPQLHDI 638 (720)
Q Consensus 562 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~--~~~~~~~~~ 638 (720)
|+........ ..+..|..|+|||.+.+. .|+.+.||||.||++.||+-|++-|.+....+....+- ...|..++.
T Consensus 173 AK~L~~~epn--iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I 250 (364)
T KOG0658|consen 173 AKVLVKGEPN--ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDI 250 (364)
T ss_pred ceeeccCCCc--eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 9987654433 456789999999999985 59999999999999999999999999866543332221 223322222
Q ss_pred HHHHhh---------cccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 639 DALAKM---------VDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 639 ~~~~~~---------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
..+.-. ........+....+.+..+|+.++|..+|.+|.++.|++++
T Consensus 251 ~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 251 KSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred hhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 211110 00011111334566789999999999999999999999965
No 53
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.3e-39 Score=345.23 Aligned_cols=244 Identities=23% Similarity=0.343 Sum_probs=201.6
Q ss_pred ceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecCCC
Q 005001 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNG 493 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 493 (720)
+.||+|+||.||+|... +|+.||+|++..... .......+.+|+.++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999764 689999999975432 2334566788999999999999999999999999999999999999
Q ss_pred CHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCcccc
Q 005001 494 NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVS 573 (720)
Q Consensus 494 sL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 573 (720)
+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 81 ~L~~~l~----~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~-~~~ 152 (323)
T cd05571 81 ELFFHLS----RERVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG-ATM 152 (323)
T ss_pred cHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC-Ccc
Confidence 9999886 246789999999999999999999999 99999999999999999999999999987533222 122
Q ss_pred ccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCC
Q 005001 574 TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMY 653 (720)
Q Consensus 574 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (720)
....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+... ...+
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~----------------~~~~~~~--~~~~ 214 (323)
T cd05571 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL----------------FELILME--EIRF 214 (323)
T ss_pred cceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHH----------------HHHHHcC--CCCC
Confidence 345799999999999999999999999999999999999999975432111 1111111 1123
Q ss_pred ChhHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 005001 654 PAKSLSRFADIIALCVQPEPEFRP-----PMSEVVQA 685 (720)
Q Consensus 654 ~~~~~~~l~~li~~cl~~dP~~RP-----s~~ell~~ 685 (720)
+...+.++.+++.+||+.||++|| ++.+++++
T Consensus 215 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 215 PRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred CCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 455677889999999999999999 79998865
No 54
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=7.3e-39 Score=328.03 Aligned_cols=251 Identities=25% Similarity=0.426 Sum_probs=205.1
Q ss_pred cCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
++|+..+.||+|+||.||+|.++++..+|+|.+..... ....+.+|++++++++||||+++++++...+..++||||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~ 80 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAM---SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEF 80 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCc---cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEc
Confidence 45777889999999999999998888999998864432 245688899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
+++|+|.++++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.++......
T Consensus 81 ~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05114 81 MENGCLLNYLRQR---QGKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDE 154 (256)
T ss_pred CCCCcHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCc
Confidence 9999999998632 34689999999999999999999999 99999999999999999999999999987654332
Q ss_pred ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccc
Q 005001 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPA 648 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (720)
........++..|+|||.+.+..++.++||||||+++|||++ |+.||......... .+... .
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~----------------~~i~~-~ 217 (256)
T cd05114 155 YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVV----------------EMISR-G 217 (256)
T ss_pred eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHH----------------HHHHC-C
Confidence 222223345678999999998899999999999999999999 89999754322111 11111 0
Q ss_pred cCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 649 LNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 649 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
.....+...+..+.+++.+||+.+|++||+++++++.|
T Consensus 218 ~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 218 FRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 11112333456789999999999999999999999876
No 55
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-41 Score=315.33 Aligned_cols=252 Identities=23% Similarity=0.330 Sum_probs=209.0
Q ss_pred hcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.+.|++.+.||+|.|+.||++.+ .+|+.+|+|++..........+.+.+|+.+.+.++||||+++.+.+.+.+..|+|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 45678888999999999999954 57999999999877776667788999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC---CCceEEcccCCCcc
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD---ELNPHLSDCGLAAL 564 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~---~~~~kl~Dfg~a~~ 564 (720)
|+|.|++|..-+- ....+++..+-..++||+++|.|+|.+ +|||||+||+|+++.. ..-+|++|||+|..
T Consensus 90 e~m~G~dl~~eIV----~R~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~ 162 (355)
T KOG0033|consen 90 DLVTGGELFEDIV----AREFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIE 162 (355)
T ss_pred ecccchHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEE
Confidence 9999999976553 135678899999999999999999999 9999999999999954 34589999999987
Q ss_pred CCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhh
Q 005001 565 TPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKM 644 (720)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (720)
.. +....-+++|||+|||||++...+|+..+|||+.||++|-|+.|++||.+.+.. ....++
T Consensus 163 l~--~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~----------------rlye~I 224 (355)
T KOG0033|consen 163 VN--DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH----------------RLYEQI 224 (355)
T ss_pred eC--CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH----------------HHHHHH
Confidence 76 334445678999999999999999999999999999999999999999864321 111222
Q ss_pred cccccC--CCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 645 VDPALN--GMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 645 ~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+..... ..+=....++..+|+++||..||.+|.|+.|.+++
T Consensus 225 ~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 225 KAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred hccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence 222211 11112355677899999999999999999988764
No 56
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=339.45 Aligned_cols=263 Identities=26% Similarity=0.420 Sum_probs=224.2
Q ss_pred HHHHhcCCCccceeccCCCcEEEEEEEc---CCc--EEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEee
Q 005001 405 LQTATNSFSQEFLIGEGSLGRVYRAEFA---NGK--IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE 479 (720)
Q Consensus 405 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~---~~~--~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 479 (720)
.+...+.....++||.|.||.||+|... .|+ .||||..+.+. .....+.|+.|..+|+.++||||++++|+|.+
T Consensus 384 yel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~-t~d~tekflqEa~iMrnfdHphIikLIGv~~e 462 (974)
T KOG4257|consen 384 YELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC-TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE 462 (974)
T ss_pred ceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC-ChhhHHHHHHHHHHHHhCCCcchhheeeeeec
Confidence 3334445566778999999999999653 233 48889887655 44557889999999999999999999999976
Q ss_pred cCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEccc
Q 005001 480 HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDC 559 (720)
Q Consensus 480 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Df 559 (720)
. ..|||||.++-|.|..+++. ....++......++.||+.||+|||+. ++|||||..+|||+....-+|++||
T Consensus 463 ~-P~WivmEL~~~GELr~yLq~---nk~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDF 535 (974)
T KOG4257|consen 463 Q-PMWIVMELAPLGELREYLQQ---NKDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADF 535 (974)
T ss_pred c-ceeEEEecccchhHHHHHHh---ccccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeeccc
Confidence 4 68999999999999999974 456788999999999999999999999 9999999999999999999999999
Q ss_pred CCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccH
Q 005001 560 GLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDI 638 (720)
Q Consensus 560 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 638 (720)
|+++.......+......-++.|||||.+.-..++.++|||-|||++||++. |..||.+-...+..
T Consensus 536 GLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI------------- 602 (974)
T KOG4257|consen 536 GLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVI------------- 602 (974)
T ss_pred chhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceE-------------
Confidence 9999988776666555556779999999999999999999999999999988 99999875543221
Q ss_pred HHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHh
Q 005001 639 DALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQR 692 (720)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~ 692 (720)
..+..+.+.+.|+.|+..++.|+.+||..||.+||.+.|+...|+++.+.
T Consensus 603 ----~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qe 652 (974)
T KOG4257|consen 603 ----GHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQE 652 (974)
T ss_pred ----EEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHH
Confidence 22334556678899999999999999999999999999999999998873
No 57
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=5.1e-39 Score=330.18 Aligned_cols=255 Identities=24% Similarity=0.389 Sum_probs=209.8
Q ss_pred hcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
.++|+..++||+|+||.||+|...+++.||+|.+.... ...+.+.+|+.+++.++|+||+++++++...+..++|||
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT---MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITE 81 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc---hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEe
Confidence 45788899999999999999998888899999886432 235678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+++++|.++++.. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 82 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05072 82 YMAKGSLLDFLKSD--EGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 156 (261)
T ss_pred cCCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCC
Confidence 99999999998742 345788999999999999999999998 9999999999999999999999999999876543
Q ss_pred CccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
.........++..|+|||.+.+..++.++|||||||++|||++ |+.||........... +..
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~-----------------~~~ 219 (261)
T cd05072 157 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSA-----------------LQR 219 (261)
T ss_pred ceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHH-----------------HHc
Confidence 2222233346778999999999999999999999999999998 9999975432211110 011
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVR 688 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~ 688 (720)
..........+.++.+++.+||+.+|++||+++++.+.|++
T Consensus 220 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 220 GYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred CCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 11112223456778999999999999999999999999875
No 58
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.7e-39 Score=345.14 Aligned_cols=247 Identities=23% Similarity=0.347 Sum_probs=205.6
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
++|+..+.||+|+||.||+|.+. +++.||+|.+..... .......+.+|+.++++++||||+++++++...+..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 56888999999999999999775 588999999865432 2234567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+.+|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 98 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 98 EFVVGGELFTHLRK----AGRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD 170 (329)
T ss_pred cCCCCChHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence 99999999999873 45788999999999999999999999 999999999999999999999999999976543
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
.. ....||+.|+|||++.+..++.++|||||||++|||++|+.||....+.. ...++...
T Consensus 171 ~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~----------------~~~~i~~~ 230 (329)
T PTZ00263 171 RT----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR----------------IYEKILAG 230 (329)
T ss_pred Cc----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH----------------HHHHHhcC
Confidence 22 23579999999999999999999999999999999999999997543211 11111111
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPP-----MSEVVQA 685 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~ell~~ 685 (720)
. ..++...+..+.+|+.+||+.||++||+ +++++++
T Consensus 231 ~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 231 R--LKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred C--cCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 1 1234445667889999999999999997 6888765
No 59
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.6e-39 Score=344.67 Aligned_cols=255 Identities=22% Similarity=0.317 Sum_probs=207.4
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccC-hHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
++|++.+.||+|+||.||+|.+. +++.||+|++...... ......+.+|+.++..++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36888999999999999999876 5889999999754322 234567888999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++|+|.++++ ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~----~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~ 153 (333)
T cd05600 81 EYVPGGDFRTLLN----NLGVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT 153 (333)
T ss_pred eCCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc
Confidence 9999999999996 245789999999999999999999999 999999999999999999999999999876543
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
......||+.|+|||++.+..++.++|||||||++|||++|..||...........+.. .......
T Consensus 154 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~----------~~~~~~~ 219 (333)
T cd05600 154 ----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKY----------WKETLQR 219 (333)
T ss_pred ----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHh----------ccccccC
Confidence 22345799999999999999999999999999999999999999976543221111100 0000000
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
..........+.++.+++.+||..+|.+||++++++++
T Consensus 220 ~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 220 PVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred CCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 00000012346678899999999999999999999976
No 60
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-39 Score=338.40 Aligned_cols=268 Identities=23% Similarity=0.411 Sum_probs=230.3
Q ss_pred hcHHHHhcCCCccceeccCCCcEEEEEEEcC-CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecC
Q 005001 403 ASLQTATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG 481 (720)
Q Consensus 403 ~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 481 (720)
+.++-...+....++||-|.||+||.|.|+. .-.||||.++.+. .+..+|+.|..+|+.++|||+|+++|+|..+.
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt---MeveEFLkEAAvMKeikHpNLVqLLGVCT~Ep 336 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEP 336 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc---hhHHHHHHHHHHHHhhcCccHHHHhhhhccCC
Confidence 3455555566677899999999999998875 5679999998654 45788999999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCC
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 561 (720)
..|||+|||..|+|.++++.+. ...++....+.++.||..|++||..+ ++|||||.++|+|+.++..+||+|||+
T Consensus 337 PFYIiTEfM~yGNLLdYLRecn--r~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGL 411 (1157)
T KOG4278|consen 337 PFYIITEFMCYGNLLDYLRECN--RSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGL 411 (1157)
T ss_pred CeEEEEecccCccHHHHHHHhc--hhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccch
Confidence 9999999999999999998643 45677788899999999999999999 999999999999999999999999999
Q ss_pred CccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHH
Q 005001 562 AALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDA 640 (720)
Q Consensus 562 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 640 (720)
++++..+........--.+.|.|||.+....++.|+|||+|||+|||+.| |-.||.+-+. ..
T Consensus 412 sRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl-----------------Sq 474 (1157)
T KOG4278|consen 412 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----------------SQ 474 (1157)
T ss_pred hhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH-----------------HH
Confidence 99987665444433334678999999999999999999999999999999 8888876321 23
Q ss_pred HHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhcc
Q 005001 641 LAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 695 (720)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~~ 695 (720)
+...+...++-..|+.|+..+++||+.||++.|.+||++.|+-+.++.|....+.
T Consensus 475 VY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~sSi 529 (1157)
T KOG4278|consen 475 VYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSSSI 529 (1157)
T ss_pred HHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhccccc
Confidence 3444556677778999999999999999999999999999999999999877663
No 61
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.1e-38 Score=331.92 Aligned_cols=258 Identities=26% Similarity=0.466 Sum_probs=210.2
Q ss_pred cCCCccceeccCCCcEEEEEEEcC------CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFAN------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (720)
++|+..+.||+|+||.||+|.... ...|++|.+.... .......+.+|+..+++++||||+++++++...+..
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA-EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPT 83 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC-CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCce
Confidence 467888999999999999997643 2579999886443 334456789999999999999999999999998999
Q ss_pred EEEEEecCCCCHHHHhhhccC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCC
Q 005001 484 LLVYEYVGNGNLHDMLHFADD------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE 551 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~ 551 (720)
+++|||+++++|.+++..... ....+++.++..++.|++.||+|||+. +++||||||+||+++++
T Consensus 84 ~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~ 160 (283)
T cd05048 84 CMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEG 160 (283)
T ss_pred EEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCC
Confidence 999999999999999974321 114688899999999999999999999 99999999999999999
Q ss_pred CceEEcccCCCccCCCCCc-cccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHH
Q 005001 552 LNPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVR 629 (720)
Q Consensus 552 ~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~ 629 (720)
+.++|+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |..||.+......
T Consensus 161 ~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~----- 235 (283)
T cd05048 161 LTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEV----- 235 (283)
T ss_pred CcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-----
Confidence 9999999999876533222 22233467889999999999999999999999999999998 9999976443211
Q ss_pred hhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 005001 630 WATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVR 688 (720)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~ 688 (720)
.+.+........+..++.++.+|+.+||+.||.+||+++||+++|++
T Consensus 236 ------------~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 236 ------------IEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred ------------HHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 11111112223355677889999999999999999999999999865
No 62
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.3e-38 Score=327.27 Aligned_cols=255 Identities=25% Similarity=0.416 Sum_probs=209.3
Q ss_pred hcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
.++|+..+.||+|+||.||+|...+++.||+|.++.... ....+.+|+.++++++||||+++++++...+..++|||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM---DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTE 81 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc---cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeee
Confidence 456888999999999999999888888999999875432 34568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+++++|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||++......
T Consensus 82 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05068 82 LMKYGSLLEYLQGG--AGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKED 156 (261)
T ss_pred cccCCcHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCC
Confidence 99999999998632 235689999999999999999999999 9999999999999999999999999999876533
Q ss_pred CccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
..........+..|+|||.+.+..++.++||||||+++|||++ |+.||......... ..+..
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~-----------------~~~~~ 219 (261)
T cd05068 157 IYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVL-----------------QQVDQ 219 (261)
T ss_pred cccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH-----------------HHHHc
Confidence 2221222233457999999999999999999999999999999 99999754321111 11111
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVR 688 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~ 688 (720)
......+...+..+.+++.+||+.+|++||+++++++.|++
T Consensus 220 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 220 GYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred CCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 11122344566789999999999999999999999999975
No 63
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=2.4e-38 Score=326.15 Aligned_cols=256 Identities=28% Similarity=0.438 Sum_probs=209.1
Q ss_pred cCCCccceeccCCCcEEEEEEEcC----CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFAN----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
++|...+.||+|+||.||+|.+.. ...||+|.+.... .......+.+|+..+++++||||+++++++...+..++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS-SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 568889999999999999998753 4579999886543 34445678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
||||+++++|.+++.. ....+++..+.+++.|++.||+|||+. +|+||||||+||++++++.++|+|||++...
T Consensus 83 v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 156 (266)
T cd05033 83 ITEYMENGSLDKFLRE---NDGKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRL 156 (266)
T ss_pred EEEcCCCCCHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhcc
Confidence 9999999999999873 234789999999999999999999998 9999999999999999999999999999876
Q ss_pred CCCCcc-ccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHh
Q 005001 566 PNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAK 643 (720)
Q Consensus 566 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (720)
...... ......++..|+|||.+.+..++.++||||||+++|||++ |..||........ . +
T Consensus 157 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~----------------~-~ 219 (266)
T cd05033 157 EDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDV----------------I-K 219 (266)
T ss_pred cccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHH----------------H-H
Confidence 522221 1222345678999999999999999999999999999998 9999865432111 1 1
Q ss_pred hcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 005001 644 MVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRL 689 (720)
Q Consensus 644 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~ 689 (720)
.+........+...+..+.+++.+||+.+|++||++.|+++.|.++
T Consensus 220 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 220 AVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1111111123345667899999999999999999999999999876
No 64
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2.1e-38 Score=325.98 Aligned_cols=255 Identities=24% Similarity=0.430 Sum_probs=209.2
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
.+|+..+.||+|+||.||+|... .++.||+|.+.... .....+.+|++.+++++|+||+++++++...+..++|||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 82 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc---hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEE
Confidence 45777889999999999999765 58899999986432 335678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+++++|.+++... ....+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||++......
T Consensus 83 ~~~~~~L~~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~ 157 (263)
T cd05052 83 FMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 157 (263)
T ss_pred eCCCCcHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccccc
Confidence 99999999998632 235689999999999999999999998 9999999999999999999999999998766543
Q ss_pred CccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
.........++..|+|||.+.+..++.++|||||||++|||++ |..||....... ..+....
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~-----------------~~~~~~~ 220 (263)
T cd05052 158 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-----------------VYELLEK 220 (263)
T ss_pred eeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-----------------HHHHHHC
Confidence 2222222334678999999999999999999999999999998 899987543211 1111111
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRL 689 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~ 689 (720)
......+...+..+.+++.+||+.||++||++.++++.|+.+
T Consensus 221 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 221 GYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 222234555678899999999999999999999999999875
No 65
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=3e-38 Score=325.60 Aligned_cols=262 Identities=23% Similarity=0.393 Sum_probs=212.6
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccc-cChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAA-LSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
++|++.+.||+|+||.||+|... +++.||+|.+.... ........+.+|+.+++.++||||+++++++...+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 46888999999999999999765 68999999876432 23444567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++|+|.+++.........+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 99999999999875544456689999999999999999999999 999999999999999999999999999876543
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
... ......|++.|+|||.+.+..++.++|+||||+++|||++|+.||........ ... ......
T Consensus 159 ~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~-~~~-------------~~~~~~ 223 (267)
T cd08228 159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLF-SLC-------------QKIEQC 223 (267)
T ss_pred hhH-HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHH-HHH-------------HHHhcC
Confidence 221 12234688899999999998899999999999999999999999865332111 010 111111
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRL 689 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~ 689 (720)
......+...+..+.+++.+||+.+|++||++.++++.+.++
T Consensus 224 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 224 DYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred CCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 111112234557789999999999999999999999999875
No 66
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=6.2e-39 Score=357.16 Aligned_cols=260 Identities=23% Similarity=0.346 Sum_probs=213.0
Q ss_pred HHHhcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecC---
Q 005001 406 QTATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG--- 481 (720)
Q Consensus 406 ~~~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--- 481 (720)
....++|.+.+.||+|+||.||+|.. .+|+.||+|.+............+.+|+..+..++|+||+++++.+...+
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 34457899999999999999999965 47899999999766656666778889999999999999999887765432
Q ss_pred -----eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEE
Q 005001 482 -----QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHL 556 (720)
Q Consensus 482 -----~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl 556 (720)
..++||||+++|+|.++++........+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL 184 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKL 184 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEE
Confidence 36899999999999999975444556799999999999999999999999 9999999999999999999999
Q ss_pred cccCCCccCCCCC-ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcccc
Q 005001 557 SDCGLAALTPNTE-RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQL 635 (720)
Q Consensus 557 ~Dfg~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~ 635 (720)
+|||+++...... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 185 ~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~------------ 252 (496)
T PTZ00283 185 GDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEE------------ 252 (496)
T ss_pred EecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH------------
Confidence 9999997654322 122334679999999999999999999999999999999999999997543211
Q ss_pred ccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 636 HDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.+.+..... ....+...+.++.+++.+||+.||.+||++.+++++
T Consensus 253 ----~~~~~~~~~-~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 253 ----VMHKTLAGR-YDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred ----HHHHHhcCC-CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 111111111 122345567789999999999999999999999865
No 67
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=4.9e-39 Score=342.51 Aligned_cols=248 Identities=22% Similarity=0.333 Sum_probs=205.5
Q ss_pred hcCCCccceeccCCCcEEEEEEEcC--CcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFAN--GKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
.++|...+.||+|+||.||+|.+.+ +..||+|++..... .......+.+|+.+++.++||||+++++++.+.+..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 3568889999999999999997643 36899999864432 23345678889999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++...
T Consensus 109 v~Ey~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~ 181 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRR----NKRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVV 181 (340)
T ss_pred EEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeec
Confidence 9999999999999973 45789999999999999999999999 9999999999999999999999999999765
Q ss_pred CCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
... .....||+.|+|||++.+..++.++|||||||++|||++|..||....+... ..++.
T Consensus 182 ~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~----------------~~~i~ 241 (340)
T PTZ00426 182 DTR----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLI----------------YQKIL 241 (340)
T ss_pred CCC----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHH----------------HHHHh
Confidence 332 2345799999999999999899999999999999999999999976432111 11111
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRP-----PMSEVVQA 685 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~ell~~ 685 (720)
... ..+|...+..+.+++++||+.||++|+ ++++++++
T Consensus 242 ~~~--~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 242 EGI--IYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred cCC--CCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 111 123445566788999999999999995 89988876
No 68
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.2e-38 Score=339.31 Aligned_cols=266 Identities=26% Similarity=0.423 Sum_probs=210.3
Q ss_pred HHhcCCCccceeccCCCcEEEEEEEc------CCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEee
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAE 479 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 479 (720)
...++|++.+.||+|+||.||+|... +++.||+|++.... .......+.+|+.++.++ +|+||+++++++..
T Consensus 4 ~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~ 82 (337)
T cd05054 4 FPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA-TASEYKALMTELKILIHIGHHLNVVNLLGACTK 82 (337)
T ss_pred cCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC-CHHHHHHHHHHHHHHHhhccCcchhheeeeEec
Confidence 34567999999999999999999532 35789999987543 334456778899999999 89999999998765
Q ss_pred c-CeEEEEEEecCCCCHHHHhhhccCC-----------------------------------------------------
Q 005001 480 H-GQRLLVYEYVGNGNLHDMLHFADDS----------------------------------------------------- 505 (720)
Q Consensus 480 ~-~~~~lV~e~~~~gsL~~~l~~~~~~----------------------------------------------------- 505 (720)
. ...++++||+++++|.+++......
T Consensus 83 ~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (337)
T cd05054 83 PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEG 162 (337)
T ss_pred CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhh
Confidence 4 5688999999999999998642210
Q ss_pred ----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccc-cccccccc
Q 005001 506 ----SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV-STQMVGAF 580 (720)
Q Consensus 506 ----~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~ 580 (720)
...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.++|+|||++.......... .....++.
T Consensus 163 ~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd05054 163 DELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPL 239 (337)
T ss_pred hHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCc
Confidence 13689999999999999999999999 99999999999999999999999999998654322221 22335677
Q ss_pred cccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCCChhHHH
Q 005001 581 GYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLS 659 (720)
Q Consensus 581 ~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (720)
.|+|||++.+..++.++|||||||++|||++ |..||....... .+.+.+........+.....
T Consensus 240 ~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~ 303 (337)
T cd05054 240 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE----------------EFCRRLKEGTRMRAPEYATP 303 (337)
T ss_pred cccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH----------------HHHHHHhccCCCCCCccCCH
Confidence 8999999999999999999999999999998 999997533211 11111111112222344567
Q ss_pred HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHh
Q 005001 660 RFADIIALCVQPEPEFRPPMSEVVQALVRLVQR 692 (720)
Q Consensus 660 ~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~ 692 (720)
++.+++.+||+.+|++||++.|++++|+++++.
T Consensus 304 ~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~~ 336 (337)
T cd05054 304 EIYSIMLDCWHNNPEDRPTFSELVEILGDLLQE 336 (337)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 789999999999999999999999999998763
No 69
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.2e-38 Score=345.44 Aligned_cols=265 Identities=25% Similarity=0.394 Sum_probs=212.0
Q ss_pred HHhcCCCccceeccCCCcEEEEEEEc------CCcEEEEEEccccccChHHHHHHHHHHHHhhcCC-CCCccccceEEee
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAE 479 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~ 479 (720)
...++|++.+.||+|+||.||+|.+. .+..||+|++.... .....+.+.+|+++++++. ||||+++++++.+
T Consensus 34 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~ 112 (400)
T cd05105 34 FPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA-RSSEKQALMSELKIMTHLGPHLNIVNLLGACTK 112 (400)
T ss_pred ccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc
Confidence 34568889999999999999999753 23479999996543 3344577899999999995 9999999999999
Q ss_pred cCeEEEEEEecCCCCHHHHhhhccC-------------------------------------------------------
Q 005001 480 HGQRLLVYEYVGNGNLHDMLHFADD------------------------------------------------------- 504 (720)
Q Consensus 480 ~~~~~lV~e~~~~gsL~~~l~~~~~------------------------------------------------------- 504 (720)
.+..++||||+++|+|.++++....
T Consensus 113 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (400)
T cd05105 113 SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPML 192 (400)
T ss_pred CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhh
Confidence 9999999999999999999864321
Q ss_pred -------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEE
Q 005001 505 -------------------------------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANIL 547 (720)
Q Consensus 505 -------------------------------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIl 547 (720)
....+++..+..++.|++.||+|||+. +|+||||||+|||
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nil 269 (400)
T cd05105 193 EIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVL 269 (400)
T ss_pred hhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEE
Confidence 013478888999999999999999998 9999999999999
Q ss_pred eCCCCceEEcccCCCccCCCCCcc-ccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchh
Q 005001 548 LDDELNPHLSDCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQ 625 (720)
Q Consensus 548 l~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~ 625 (720)
++.++.+||+|||+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |..||........
T Consensus 270 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~- 348 (400)
T cd05105 270 LAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST- 348 (400)
T ss_pred EeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH-
Confidence 999999999999998765432221 1223457788999999999999999999999999999997 9999975432110
Q ss_pred hHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHH
Q 005001 626 SLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQ 691 (720)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~ 691 (720)
..+.+........+...+..+.+++.+||+.||++||++.+|.+.|+++.+
T Consensus 349 ---------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 349 ---------------FYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred ---------------HHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 111111112222344567789999999999999999999999999988753
No 70
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=3.6e-39 Score=346.21 Aligned_cols=252 Identities=23% Similarity=0.330 Sum_probs=207.9
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccCh-HHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL-QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
++|...+.||+|+||.||+|... +++.||+|++....... .....+.+|+.++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 46888999999999999999775 68999999997544322 44567888999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 81 EYMPGGDLMNLLIR----KDVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNK 153 (350)
T ss_pred cCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence 99999999999973 36789999999999999999999998 999999999999999999999999999976544
Q ss_pred CC----------------------------ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCC
Q 005001 568 TE----------------------------RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSS 619 (720)
Q Consensus 568 ~~----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~ 619 (720)
.. ........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~ 233 (350)
T cd05573 154 AKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD 233 (350)
T ss_pred cCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCC
Confidence 32 11223457999999999999999999999999999999999999999865
Q ss_pred CCcchhhHHHhhccccccHHHHHhhcc--cccCCCCChhHHHHHHHHHHHhcCCCCCCCCC-HHHHHHH
Q 005001 620 RPRSEQSLVRWATPQLHDIDALAKMVD--PALNGMYPAKSLSRFADIIALCVQPEPEFRPP-MSEVVQA 685 (720)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~ell~~ 685 (720)
...... .++.. ...........+..+.+++.+|+. ||.+||+ +++++++
T Consensus 234 ~~~~~~----------------~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 234 TLQETY----------------NKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CHHHHH----------------HHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 432111 11111 111111112246788999999998 9999999 9999986
No 71
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=5e-39 Score=320.32 Aligned_cols=271 Identities=23% Similarity=0.317 Sum_probs=209.0
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCC-ccccceEEeecC------
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN-IVTLAGYCAEHG------ 481 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~------ 481 (720)
..|...++||+|+||+||+|+.. +|+.||+|++..............+|+.+++.++|+| |+.+++++....
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 34666778999999999999654 6899999999865433233456689999999999999 999999998876
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCC
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 561 (720)
..++|+||++. +|.+++.......+.++...++.++.|++.||+|||++ +|+||||||+|||++++|.+||+|||+
T Consensus 91 ~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 91 KLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred eEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccch
Confidence 78999999976 99999975433225677789999999999999999999 999999999999999999999999999
Q ss_pred CccCCCCCccccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHH--hhccccccH
Q 005001 562 AALTPNTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVR--WATPQLHDI 638 (720)
Q Consensus 562 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~--~~~~~~~~~ 638 (720)
|+...-+... .+..++|..|+|||++.+. .|+..+||||+|||++||++++.-|.+.........+- ..+|.-..+
T Consensus 167 Ara~~ip~~~-yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~W 245 (323)
T KOG0594|consen 167 ARAFSIPMRT-YTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDW 245 (323)
T ss_pred HHHhcCCccc-ccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCC
Confidence 9865433222 3446789999999999987 68999999999999999999999998876643332221 122322222
Q ss_pred HHHHhhcccc--cCCCC-ChhH-------HHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 639 DALAKMVDPA--LNGMY-PAKS-------LSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 639 ~~~~~~~~~~--~~~~~-~~~~-------~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.......+-. ..... +... .....+++.+|++.+|.+|.|++.++++
T Consensus 246 p~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 246 PGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 2222111111 11111 1111 1367899999999999999999999987
No 72
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7e-38 Score=316.26 Aligned_cols=263 Identities=26% Similarity=0.410 Sum_probs=209.1
Q ss_pred HHHhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhc--CCCCCccccceEEeec---
Q 005001 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR--LRHPNIVTLAGYCAEH--- 480 (720)
Q Consensus 406 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~--- 480 (720)
+....+....+.||+|.||+||+|.+. |+.||||++.. .+++.+.+|.++++. ++|+||+.+++.-..+
T Consensus 207 RTiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~s-----rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs 280 (513)
T KOG2052|consen 207 RTIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSS-----RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGS 280 (513)
T ss_pred HhhhheeEEEEEecCccccceeecccc-CCceEEEEecc-----cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCc
Confidence 344566778899999999999999996 89999999953 346677788777765 4999999999886443
Q ss_pred -CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCcEEecCCCCCEEeCCCCce
Q 005001 481 -GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV-----CLPSVVHRNFKSANILLDDELNP 554 (720)
Q Consensus 481 -~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-----~~~~iiH~Dlkp~NIll~~~~~~ 554 (720)
.++|||++|.+.|+|+|+|. ...++....++++..+|.||+|||-. ++|.|.|||||+.|||+..++.+
T Consensus 281 ~TQLwLvTdYHe~GSL~DyL~-----r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C 355 (513)
T KOG2052|consen 281 WTQLWLVTDYHEHGSLYDYLN-----RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 355 (513)
T ss_pred eEEEEEeeecccCCcHHHHHh-----hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcE
Confidence 26799999999999999997 57899999999999999999999954 57899999999999999999999
Q ss_pred EEcccCCCccCCCCCcc---ccccccccccccCccccccCC----C-c-ccchhhhHHHHHHHHHh----------CCCC
Q 005001 555 HLSDCGLAALTPNTERQ---VSTQMVGAFGYSAPEFALSGI----Y-T-VKSDVYSFGVVMLELLT----------GRKP 615 (720)
Q Consensus 555 kl~Dfg~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~----~-~-~~~DvwSlGv~l~ellt----------g~~p 615 (720)
.|+|+|+|-......+. .....+||.+|||||++...- + + ..+||||||.++||+.. -+.|
T Consensus 356 ~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~P 435 (513)
T KOG2052|consen 356 CIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLP 435 (513)
T ss_pred EEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCC
Confidence 99999999877655332 234578999999999997543 2 2 35899999999999985 2345
Q ss_pred CCCCCCcchhhHHHhhccccccHHHHHhhc------ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 005001 616 LDSSRPRSEQSLVRWATPQLHDIDALAKMV------DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRL 689 (720)
Q Consensus 616 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~ 689 (720)
|....+ .....+++.+++ ....+.+........+.++|+.||..+|..|.|+-.|-+.|.++
T Consensus 436 yyd~Vp------------~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l 503 (513)
T KOG2052|consen 436 YYDVVP------------SDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKL 503 (513)
T ss_pred cccCCC------------CCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHH
Confidence 554322 223334444433 22223344456778899999999999999999999999999887
Q ss_pred HH
Q 005001 690 VQ 691 (720)
Q Consensus 690 ~~ 691 (720)
.+
T Consensus 504 ~~ 505 (513)
T KOG2052|consen 504 SN 505 (513)
T ss_pred hc
Confidence 64
No 73
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=8.7e-39 Score=338.84 Aligned_cols=244 Identities=24% Similarity=0.332 Sum_probs=200.7
Q ss_pred ceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecCCC
Q 005001 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNG 493 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 493 (720)
+.||+|+||.||++... +|+.||+|++..... .......+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 36999999999999764 689999999975432 2334566788999999999999999999999999999999999999
Q ss_pred CHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCcccc
Q 005001 494 NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVS 573 (720)
Q Consensus 494 sL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 573 (720)
+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++....... ...
T Consensus 81 ~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~ 152 (323)
T cd05595 81 ELFFHLS----RERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-ATM 152 (323)
T ss_pred cHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCC-Ccc
Confidence 9998886 245789999999999999999999999 99999999999999999999999999987532221 122
Q ss_pred ccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCC
Q 005001 574 TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMY 653 (720)
Q Consensus 574 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (720)
....||+.|+|||++.+..++.++|||||||++|||++|+.||......... ....... ..+
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~----------------~~~~~~~--~~~ 214 (323)
T cd05595 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF----------------ELILMEE--IRF 214 (323)
T ss_pred ccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHH----------------HHHhcCC--CCC
Confidence 3457999999999999999999999999999999999999999754322111 1111111 123
Q ss_pred ChhHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 005001 654 PAKSLSRFADIIALCVQPEPEFRP-----PMSEVVQA 685 (720)
Q Consensus 654 ~~~~~~~l~~li~~cl~~dP~~RP-----s~~ell~~ 685 (720)
+...+.++.+++.+||+.||++|| ++.+++++
T Consensus 215 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 215 PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 445667889999999999999998 88888865
No 74
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.8e-38 Score=336.32 Aligned_cols=267 Identities=21% Similarity=0.375 Sum_probs=206.4
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.++|+..+.||+|+||.||+|.+. ++..+|+|.+.... .......+.+|+++++.++||||+++++++..++..++||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence 467999999999999999999776 57888998876542 3344567899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++|+|.++++. .+.+++..+..++.|++.||.|||+.+ +|+||||||+|||++.++.+||+|||++.....
T Consensus 83 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~ 156 (333)
T cd06650 83 EHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (333)
T ss_pred ecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhh
Confidence 99999999999863 456889999999999999999999852 799999999999999999999999999875533
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhh----------------
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWA---------------- 631 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~---------------- 631 (720)
. ......||..|+|||++.+..++.++|||||||++|||++|+.||...............
T Consensus 157 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (333)
T cd06650 157 S---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRP 233 (333)
T ss_pred h---ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCC
Confidence 2 123356899999999999989999999999999999999999999754432211111000
Q ss_pred --------cc----ccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 632 --------TP----QLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 632 --------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.+ ........................+.++.+|+.+||+.||++||++.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h 299 (333)
T cd06650 234 PGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH 299 (333)
T ss_pred ccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence 00 0000000000111110000111245678999999999999999999999876
No 75
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.5e-38 Score=326.56 Aligned_cols=257 Identities=26% Similarity=0.454 Sum_probs=212.8
Q ss_pred HHhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
....+|...+.||+|+||.||+|...+++.+++|.+.... ......+.+|+.+++.++||||+++++++...+..++|
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDD--LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYII 80 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccc--hhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEE
Confidence 3456788899999999999999998889999999987543 22355688899999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||+++++|.++++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+....
T Consensus 81 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~ 155 (261)
T cd05148 81 TELMEKGSLLAFLRSP--EGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIK 155 (261)
T ss_pred EeecccCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcC
Confidence 9999999999999742 345789999999999999999999999 99999999999999999999999999997664
Q ss_pred CCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
..... .....++..|+|||.+.+..++.++||||||+++|+|++ |+.||....... .....
T Consensus 156 ~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~----------------~~~~~- 217 (261)
T cd05148 156 EDVYL-SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE----------------VYDQI- 217 (261)
T ss_pred Ccccc-ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH----------------HHHHH-
Confidence 33221 223446778999999999899999999999999999998 899997543211 11111
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVR 688 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~ 688 (720)
........+...+..+.+++.+||+.||++||+++++++.|+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 218 TAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred HhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 1122223345667789999999999999999999999999875
No 76
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1e-38 Score=338.87 Aligned_cols=244 Identities=23% Similarity=0.330 Sum_probs=201.3
Q ss_pred ceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecCCC
Q 005001 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNG 493 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 493 (720)
+.||+|+||.||++... +|+.||+|++..... .......+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999764 689999999975432 2334567888999999999999999999999999999999999999
Q ss_pred CHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCcccc
Q 005001 494 NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVS 573 (720)
Q Consensus 494 sL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 573 (720)
+|.+++. ....+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 81 ~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~-~~~ 152 (328)
T cd05593 81 ELFFHLS----RERVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA-ATM 152 (328)
T ss_pred CHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCcc-ccc
Confidence 9998886 245789999999999999999999999 99999999999999999999999999987533221 122
Q ss_pred ccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCC
Q 005001 574 TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMY 653 (720)
Q Consensus 574 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (720)
....||+.|+|||++.+..++.++|||||||++|||++|+.||......... ...... ...+
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~----------------~~~~~~--~~~~ 214 (328)
T cd05593 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF----------------ELILME--DIKF 214 (328)
T ss_pred ccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHH----------------HHhccC--CccC
Confidence 3457999999999999999999999999999999999999999754321111 111111 1123
Q ss_pred ChhHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 005001 654 PAKSLSRFADIIALCVQPEPEFRP-----PMSEVVQA 685 (720)
Q Consensus 654 ~~~~~~~l~~li~~cl~~dP~~RP-----s~~ell~~ 685 (720)
+...+.++.+++.+||+.||++|| ++.+++++
T Consensus 215 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 215 PRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 445667889999999999999997 89999875
No 77
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.7e-38 Score=353.59 Aligned_cols=253 Identities=20% Similarity=0.280 Sum_probs=206.2
Q ss_pred CCCccceeccCCCcEEEEEEEc-C-CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-N-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
.|...+.||+|+||.||+|... + ++.||+|.+... .......+.+|+.+++.++||||+++++++...+..++|||
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E 145 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN--DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIME 145 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEE
Confidence 3788899999999999999654 3 677888877533 23344567889999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+++|+|.++++........+++.++..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 146 ~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~ 222 (478)
T PTZ00267 146 YGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDS 222 (478)
T ss_pred CCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCCc
Confidence 9999999998865434456789999999999999999999999 9999999999999999999999999999865433
Q ss_pred Cc-cccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 569 ER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 569 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
.. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||....... .+......
T Consensus 223 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~----------------~~~~~~~~ 286 (478)
T PTZ00267 223 VSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE----------------IMQQVLYG 286 (478)
T ss_pred cccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH----------------HHHHHHhC
Confidence 22 12344579999999999999999999999999999999999999997543211 11111111
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.. ...+...+..+.++|.+||+.||++||++.+++++
T Consensus 287 ~~-~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 287 KY-DPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred CC-CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 11 12344556789999999999999999999998753
No 78
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.2e-38 Score=340.35 Aligned_cols=267 Identities=25% Similarity=0.362 Sum_probs=201.0
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec-----CeEE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH-----GQRL 484 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~ 484 (720)
+|+..+.||+|+||.||+|... +++.||+|++............+.+|+.++++++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4788899999999999999765 689999999875443444456788999999999999999999987543 2579
Q ss_pred EEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
+||||+. ++|.+++. ....+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 81 lv~e~~~-~~L~~~l~----~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~ 152 (338)
T cd07859 81 VVFELME-SDLHQVIK----ANDDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARV 152 (338)
T ss_pred EEEecCC-CCHHHHHH----hcccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccccc
Confidence 9999995 68998886 245789999999999999999999999 999999999999999999999999999975
Q ss_pred CCCCCc--cccccccccccccCcccccc--CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHH-hh-ccccccH
Q 005001 565 TPNTER--QVSTQMVGAFGYSAPEFALS--GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVR-WA-TPQLHDI 638 (720)
Q Consensus 565 ~~~~~~--~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~-~~-~~~~~~~ 638 (720)
...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+. .. .+.....
T Consensus 153 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 232 (338)
T cd07859 153 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETI 232 (338)
T ss_pred cccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 432221 11234579999999999876 678999999999999999999999997654322111110 00 0000000
Q ss_pred --------HHHHhhcccccCCCC---ChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 639 --------DALAKMVDPALNGMY---PAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 639 --------~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
......+........ ....+..+.+++.+||+.||++||+++|++++
T Consensus 233 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 233 SRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 000000000000000 01234567899999999999999999999976
No 79
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=2.5e-38 Score=324.08 Aligned_cols=252 Identities=25% Similarity=0.414 Sum_probs=205.1
Q ss_pred cCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
.+|...+.||+|+||.||+|+..++..+|+|.+..... ....+.+|+.++++++||||+++++++...+..++||||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM---SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEY 80 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc---cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEc
Confidence 35777889999999999999888777899999875432 245688999999999999999999999988899999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
+.+|+|.+++... ...+++.++..++.|++.||+|||+. +++|+||||+||+++.++.+||+|||.++......
T Consensus 81 ~~~~~l~~~i~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05113 81 MSNGCLLNYLREH---GKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE 154 (256)
T ss_pred CCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCc
Confidence 9999999998632 34689999999999999999999999 99999999999999999999999999987654332
Q ss_pred ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccc
Q 005001 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPA 648 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (720)
........++..|+|||.+.+..++.++|||||||++|||++ |..||........ ...... .
T Consensus 155 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~----------------~~~~~~-~ 217 (256)
T cd05113 155 YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSET----------------VEKVSQ-G 217 (256)
T ss_pred eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHH----------------HHHHhc-C
Confidence 222223346678999999998889999999999999999999 9999875432111 111111 1
Q ss_pred cCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 005001 649 LNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALV 687 (720)
Q Consensus 649 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~ 687 (720)
.....+...+..+.+++.+||+.||++||++.++++.|+
T Consensus 218 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 218 LRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 111123334578899999999999999999999998763
No 80
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.5e-38 Score=331.62 Aligned_cols=267 Identities=21% Similarity=0.323 Sum_probs=203.5
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
++|+..+.||+|+||.||+|... +++.||+|.++.... ......+.+|++++++++||||+++++++...+..++|||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE 83 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc-CCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence 46888999999999999999765 688999999864432 2234567789999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+++ +|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 84 ~~~~-~l~~~l~~---~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~ 156 (288)
T cd07871 84 YLDS-DLKQYLDN---CGNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVP 156 (288)
T ss_pred CCCc-CHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCC
Confidence 9975 99988863 234678999999999999999999999 9999999999999999999999999998754332
Q ss_pred CccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhh--c------cccccHH
Q 005001 569 ERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWA--T------PQLHDID 639 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~--~------~~~~~~~ 639 (720)
.. ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...........+... . +......
T Consensus 157 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07871 157 TK-TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNE 235 (288)
T ss_pred Cc-cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccch
Confidence 21 2233568999999999876 56899999999999999999999999865543322211110 0 0111111
Q ss_pred HHHhhcccccCCC----CChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 640 ALAKMVDPALNGM----YPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 640 ~~~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.......+..... .....+.+..+|+.+||+.||.+|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 236 EFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred hhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 1111111111100 011234678899999999999999999999864
No 81
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=3.2e-38 Score=333.72 Aligned_cols=259 Identities=24% Similarity=0.414 Sum_probs=208.3
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCc----EEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGK----IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (720)
++|+..+.||+|+||.||+|.+. +++ .||+|.+.... .......+.+|+.+++.++||||+++++++... ..+
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~ 84 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 84 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cce
Confidence 46889999999999999999764 333 38999986432 334456788999999999999999999998764 578
Q ss_pred EEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
+|+||+++|+|.++++. ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 85 ~v~e~~~~g~l~~~l~~---~~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~ 158 (316)
T cd05108 85 LITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (316)
T ss_pred eeeecCCCCCHHHHHHh---ccccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcccccccc
Confidence 99999999999999873 235688999999999999999999999 999999999999999999999999999987
Q ss_pred CCCCCccc-cccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 565 TPNTERQV-STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 565 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
........ .....++..|+|||.+.+..++.++|||||||++|||++ |..||....... ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~-----------------~~ 221 (316)
T cd05108 159 LGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-----------------IS 221 (316)
T ss_pred ccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH-----------------HH
Confidence 65433221 122335678999999999999999999999999999998 999997532211 11
Q ss_pred hhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 643 KMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
...........+..++..+.+++.+||..||++||++.++++.+.++.+..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 222 SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 111222222334455677899999999999999999999999998886654
No 82
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.2e-38 Score=339.37 Aligned_cols=254 Identities=26% Similarity=0.362 Sum_probs=203.4
Q ss_pred CCCccceeccCCCcEEEEEEEc----CCcEEEEEEcccccc--ChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAAL--SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQR 483 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 483 (720)
+|++.+.||+|+||.||+++.. +++.||+|++..... .......+.+|+.++..+ +||||+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4788899999999999999653 578999999865432 122345677899999999 599999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
++||||+++|+|.+++. ....+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 81 ~lv~e~~~~g~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~ 153 (332)
T cd05614 81 HLILDYVSGGEMFTHLY----QRDNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSK 153 (332)
T ss_pred EEEEeCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCc
Confidence 99999999999999986 246789999999999999999999999 99999999999999999999999999997
Q ss_pred cCCCCCccccccccccccccCccccccCC-CcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 564 LTPNTERQVSTQMVGAFGYSAPEFALSGI-YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
..............||+.|+|||++.+.. ++.++|||||||++|||++|+.||...........+ ..
T Consensus 154 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~------------~~ 221 (332)
T cd05614 154 EFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEV------------SR 221 (332)
T ss_pred cccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHH------------HH
Confidence 65443333334467999999999998754 788999999999999999999999754322111110 01
Q ss_pred hhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 005001 643 KMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRP-----PMSEVVQA 685 (720)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~ell~~ 685 (720)
++.. .....+...+..+.+++.+||+.||++|| ++++++++
T Consensus 222 ~~~~--~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 222 RILK--CDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred HHhc--CCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 1111 11223445667788999999999999999 77788765
No 83
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=9.9e-39 Score=344.43 Aligned_cols=254 Identities=21% Similarity=0.301 Sum_probs=205.8
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
..++|+..+.||+|+||.||+|... +++.||+|.+..... .....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 3567899999999999999999775 688999999864332 22334557789999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
||||+++|+|.++++ ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++...
T Consensus 121 v~Ey~~gg~L~~~l~-----~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~ 192 (370)
T cd05596 121 VMEYMPGGDLVNLMS-----NYDIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (370)
T ss_pred EEcCCCCCcHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeec
Confidence 999999999999986 34578899999999999999999999 9999999999999999999999999999765
Q ss_pred CCCCccccccccccccccCccccccC----CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHH
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFALSG----IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDAL 641 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (720)
............||+.|+|||++.+. .++.++|||||||++|||++|+.||....... ..
T Consensus 193 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~----------------~~ 256 (370)
T cd05596 193 DANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG----------------TY 256 (370)
T ss_pred cCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH----------------HH
Confidence 43332223345799999999998754 37899999999999999999999997643211 11
Q ss_pred HhhcccccCCCCCh--hHHHHHHHHHHHhcCCCCCC--CCCHHHHHHH
Q 005001 642 AKMVDPALNGMYPA--KSLSRFADIIALCVQPEPEF--RPPMSEVVQA 685 (720)
Q Consensus 642 ~~~~~~~~~~~~~~--~~~~~l~~li~~cl~~dP~~--RPs~~ell~~ 685 (720)
.++........++. ..+.++.+++.+||+.+|.+ ||++.+++++
T Consensus 257 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 257 SKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred HHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 12221111111222 35678889999999999998 9999999876
No 84
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.2e-38 Score=336.16 Aligned_cols=242 Identities=26% Similarity=0.357 Sum_probs=198.7
Q ss_pred eccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecCCCCH
Q 005001 418 IGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNL 495 (720)
Q Consensus 418 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 495 (720)
||+|+||.||+|... +++.||+|++..... .......+.+|+.++++++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999775 578999999865432 334456788899999999999999999999999999999999999999
Q ss_pred HHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCcccccc
Q 005001 496 HDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQ 575 (720)
Q Consensus 496 ~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 575 (720)
.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... .....
T Consensus 81 ~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~ 152 (312)
T cd05585 81 FHHLQR----EGRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-DKTNT 152 (312)
T ss_pred HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCC-Ccccc
Confidence 999862 45789999999999999999999999 99999999999999999999999999987543222 22334
Q ss_pred ccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCCCh
Q 005001 576 MVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPA 655 (720)
Q Consensus 576 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (720)
..||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...+..... ..++.
T Consensus 153 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~----------------~~~~~~~~~--~~~~~ 214 (312)
T cd05585 153 FCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNE----------------MYRKILQEP--LRFPD 214 (312)
T ss_pred ccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHH----------------HHHHHHcCC--CCCCC
Confidence 579999999999999999999999999999999999999997543211 111111111 12345
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCC---HHHHHHH
Q 005001 656 KSLSRFADIIALCVQPEPEFRPP---MSEVVQA 685 (720)
Q Consensus 656 ~~~~~l~~li~~cl~~dP~~RPs---~~ell~~ 685 (720)
..+..+.+++.+||+.||++||+ +.|++++
T Consensus 215 ~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 215 GFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred cCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 56678899999999999999975 5666654
No 85
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=3.4e-38 Score=327.08 Aligned_cols=259 Identities=22% Similarity=0.377 Sum_probs=206.5
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc------CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecC
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG 481 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 481 (720)
..++|+..+.||+|+||.||+|.+. .+..||+|++.... .......+.+|+.+++.++||||+++++++....
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~ 82 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 82 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 4677999999999999999999653 35679999986432 3344567889999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhhccCC------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceE
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDS------SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPH 555 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~------~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~k 555 (720)
..++||||+++|+|.++++..... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.++
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~ 159 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVK 159 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEE
Confidence 999999999999999998743211 23467888999999999999999998 999999999999999999999
Q ss_pred EcccCCCccCCCCCccc-cccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhcc
Q 005001 556 LSDCGLAALTPNTERQV-STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATP 633 (720)
Q Consensus 556 l~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~ 633 (720)
|+|||+++......... .....+++.|+|||++.+..++.++|||||||++|||++ |..||..........
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~------- 232 (277)
T cd05062 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLR------- 232 (277)
T ss_pred ECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH-------
Confidence 99999987554322211 122345788999999999999999999999999999999 788886543221111
Q ss_pred ccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 005001 634 QLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALV 687 (720)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~ 687 (720)
...... ....+...+..+.+++.+||+.||++||++.|+++.|+
T Consensus 233 ---------~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 233 ---------FVMEGG-LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred ---------HHHcCC-cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 111111 11223455678999999999999999999999999875
No 86
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=4.1e-38 Score=326.93 Aligned_cols=257 Identities=25% Similarity=0.425 Sum_probs=207.9
Q ss_pred cCCCccceeccCCCcEEEEEEEcC------CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFAN------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (720)
.+|...+.||+|+||.||+|...+ +..||+|.+.... .......+.+|+++++.++|+||+++++++...+..
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 83 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA-SNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP 83 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC-CHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence 457778899999999999997643 4789999987543 233457889999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhcc----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCc
Q 005001 484 LLVYEYVGNGNLHDMLHFAD----------DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN 553 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~----------~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~ 553 (720)
++||||+++++|.++++... .....+++.++..++.|++.|++|||+. +++||||||+||+++.++.
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLV 160 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCe
Confidence 99999999999999997532 1234578999999999999999999999 9999999999999999999
Q ss_pred eEEcccCCCccCCCCCc-cccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhh
Q 005001 554 PHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWA 631 (720)
Q Consensus 554 ~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~ 631 (720)
++|+|||++........ .......+++.|+|||++.+..++.++|||||||++|||++ |..||.........
T Consensus 161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~------ 234 (280)
T cd05049 161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVI------ 234 (280)
T ss_pred EEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH------
Confidence 99999999875433221 11223456788999999999999999999999999999999 99999754322111
Q ss_pred ccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 005001 632 TPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALV 687 (720)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~ 687 (720)
.... .......+...+..+.+++.+||+.||++||++.|+++.|+
T Consensus 235 ----------~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 235 ----------ECIT-QGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred ----------HHHH-cCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 1111 11111223456678999999999999999999999999885
No 87
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=9.1e-39 Score=327.83 Aligned_cols=250 Identities=36% Similarity=0.591 Sum_probs=198.9
Q ss_pred ccceeccCCCcEEEEEEEc-----CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 414 QEFLIGEGSLGRVYRAEFA-----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 414 ~~~~lG~G~fg~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
..+.||.|.||.||+|.+. .+..|+||.++.. ........+.+|++.+++++||||++++|++...+..++|+|
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e 81 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS-SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME 81 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT-SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc-cccccceeeeeccccccccccccccccccccccccccccccc
Confidence 3568999999999999876 3568999999653 344557889999999999999999999999998888999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+++|+|.++++.. ....+++.++..++.||++||.|||+. +++|+||+++||+++.++.+||+|||++......
T Consensus 82 ~~~~g~L~~~L~~~--~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~ 156 (259)
T PF07714_consen 82 YCPGGSLDDYLKSK--NKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEK 156 (259)
T ss_dssp --TTEBHHHHHHHT--CTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTS
T ss_pred cccccccccccccc--ccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc
Confidence 99999999999843 246789999999999999999999999 9999999999999999999999999999766322
Q ss_pred Cc-cccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 569 ER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 569 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
.. .......+...|+|||.+.+..++.++||||||+++|||++ |+.||...... ....++ .
T Consensus 157 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~----------------~~~~~~-~ 219 (259)
T PF07714_consen 157 SKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNE----------------EIIEKL-K 219 (259)
T ss_dssp SSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHH----------------HHHHHH-H
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccc----------------cccccc-c
Confidence 22 22233457788999999999999999999999999999999 78888654221 111222 2
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
...+...+..++..+.+++.+||+.||++||++.++++.|
T Consensus 220 ~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 220 QGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 2223334556778899999999999999999999999876
No 88
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.2e-38 Score=343.50 Aligned_cols=256 Identities=22% Similarity=0.307 Sum_probs=205.7
Q ss_pred HHHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeE
Q 005001 406 QTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (720)
Q Consensus 406 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (720)
....++|+..+.||+|+||.||+|.+. +++.||+|.+..... .......+.+|+.+++.++||||+++++++.+++..
T Consensus 39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (370)
T cd05621 39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL 118 (370)
T ss_pred CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence 344578999999999999999999876 578999999864322 223345678899999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
++||||+++|+|.+++. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++.
T Consensus 119 ~lv~Ey~~gg~L~~~l~-----~~~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~ 190 (370)
T cd05621 119 YMVMEYMPGGDLVNLMS-----NYDVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCM 190 (370)
T ss_pred EEEEcCCCCCcHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccce
Confidence 99999999999999986 34578999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCccccccccccccccCccccccCC----CcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHH
Q 005001 564 LTPNTERQVSTQMVGAFGYSAPEFALSGI----YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDID 639 (720)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 639 (720)
..............||+.|+|||++.+.. ++.++||||+||++|||++|+.||...... .
T Consensus 191 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~----------------~ 254 (370)
T cd05621 191 KMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV----------------G 254 (370)
T ss_pred ecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH----------------H
Confidence 66433332334567999999999997643 788999999999999999999999754321 1
Q ss_pred HHHhhcccccCCCCC--hhHHHHHHHHHHHhcCCCCCC--CCCHHHHHHH
Q 005001 640 ALAKMVDPALNGMYP--AKSLSRFADIIALCVQPEPEF--RPPMSEVVQA 685 (720)
Q Consensus 640 ~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dP~~--RPs~~ell~~ 685 (720)
...++........++ ...+..+.+++..|+..++.+ |+++.|++++
T Consensus 255 ~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 255 TYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred HHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 112222211111122 234667889999999866654 8999999987
No 89
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=3.5e-38 Score=323.05 Aligned_cols=251 Identities=26% Similarity=0.415 Sum_probs=204.7
Q ss_pred cCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
.+|+..+.||+|+||.||+|.++++..+|+|.+..... ....+.+|+++++.++||||+++++++...+..++||||
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM---SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEY 80 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC---CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEec
Confidence 35778889999999999999888788899999864432 245678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
+++++|.++++.. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~ 154 (256)
T cd05059 81 MANGCLLNYLRER---KGKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQ 154 (256)
T ss_pred CCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceeccccc
Confidence 9999999998632 34789999999999999999999999 99999999999999999999999999987654322
Q ss_pred ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccc
Q 005001 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPA 648 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (720)
........++..|+|||.+.+..++.++||||||+++|||++ |+.||......... +.+...
T Consensus 155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~-----------------~~~~~~ 217 (256)
T cd05059 155 YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVV-----------------ESVSAG 217 (256)
T ss_pred ccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHH-----------------HHHHcC
Confidence 221222234567999999999999999999999999999999 89999754321111 111111
Q ss_pred cCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 649 LNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 649 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
.....+...+.++.+++.+||..+|++||++.|+++.|
T Consensus 218 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 218 YRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 12223445677899999999999999999999999876
No 90
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=6.5e-38 Score=322.17 Aligned_cols=255 Identities=29% Similarity=0.468 Sum_probs=207.1
Q ss_pred hcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
.++|++.+.||+|+||.||+|.+.++..||+|++..... ....+.+|+++++.++||||+++++++. .+..++|||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e 80 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTE 80 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc---CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEE
Confidence 456889999999999999999887777899999975432 2356889999999999999999998874 456899999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+++|+|.++++.. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||.++.....
T Consensus 81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~ 155 (262)
T cd05071 81 YMSKGSLLDFLKGE--MGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 155 (262)
T ss_pred cCCCCcHHHHHhhc--cccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeecccc
Confidence 99999999999732 234679999999999999999999999 9999999999999999999999999999766443
Q ss_pred CccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
.........++..|+|||+..+..++.++||||||+++|||++ |..||......... ... ..
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~----------------~~~-~~ 218 (262)
T cd05071 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL----------------DQV-ER 218 (262)
T ss_pred ccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHH----------------HHH-hc
Confidence 3222223456778999999999999999999999999999999 88888654322111 111 11
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRL 689 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~ 689 (720)
......+...+..+.+++.+||+.||++||++.++++.|++.
T Consensus 219 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 219 GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred CCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 111122345667889999999999999999999999999875
No 91
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=2.3e-38 Score=330.68 Aligned_cols=268 Identities=23% Similarity=0.334 Sum_probs=197.7
Q ss_pred cCCCccceeccCCCcEEEEEEEc--CCcEEEEEEccccccChHHHHHHHHHHHHhhcC---CCCCccccceEEe-----e
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA--NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL---RHPNIVTLAGYCA-----E 479 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~-----~ 479 (720)
++|+..+.||+|+||.||+|... +++.||+|++............+.+|+.+++.+ +||||+++++++. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36888999999999999999763 467899998865443333334455666665554 7999999999875 2
Q ss_pred cCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEccc
Q 005001 480 HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDC 559 (720)
Q Consensus 480 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Df 559 (720)
....++||||++ ++|.+++... ....+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccc
Confidence 456899999996 5999988632 234689999999999999999999999 9999999999999999999999999
Q ss_pred CCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHH-Hhhc-ccccc
Q 005001 560 GLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLV-RWAT-PQLHD 637 (720)
Q Consensus 560 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~-~~~~-~~~~~ 637 (720)
|++...... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||...........+ .... +....
T Consensus 155 g~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~ 232 (290)
T cd07862 155 GLARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 232 (290)
T ss_pred cceEeccCC--cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhh
Confidence 999765432 2233457899999999999999999999999999999999999999875543222111 1110 00000
Q ss_pred HHH---HH-hhcccccCC---CCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 638 IDA---LA-KMVDPALNG---MYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 638 ~~~---~~-~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
... .. ......... ......+..+.+++.+||+.||++||++.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 233 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred chhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 000 00 000000000 0011245677899999999999999999999863
No 92
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=7.7e-38 Score=326.73 Aligned_cols=261 Identities=26% Similarity=0.458 Sum_probs=209.8
Q ss_pred CCCccceeccCCCcEEEEEEEc------CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (720)
+|+..+.||+|+||.||+|... ....+++|.+.... .......+.+|+.+++.++||||+++++.+...+..+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA-SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLL 79 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC-CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcE
Confidence 3677889999999999999753 23568888886543 3344567889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhhccC--------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCC
Q 005001 485 LVYEYVGNGNLHDMLHFADD--------------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSA 544 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~--------------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~ 544 (720)
+|+||+.+++|.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~ 156 (290)
T cd05045 80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAAR 156 (290)
T ss_pred EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhhh
Confidence 99999999999999864321 124578999999999999999999998 9999999999
Q ss_pred CEEeCCCCceEEcccCCCccCCCCCccc-cccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCc
Q 005001 545 NILLDDELNPHLSDCGLAALTPNTERQV-STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPR 622 (720)
Q Consensus 545 NIll~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~ 622 (720)
||++++++.+||+|||+++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..||....+.
T Consensus 157 nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 236 (290)
T cd05045 157 NVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE 236 (290)
T ss_pred eEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 9999999999999999987654332211 122345678999999999899999999999999999999 99999754322
Q ss_pred chhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHh
Q 005001 623 SEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQR 692 (720)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~ 692 (720)
.. ............+...+.++.+++.+||+.+|++||++.++++.|+++..+
T Consensus 237 ~~-----------------~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~ 289 (290)
T cd05045 237 RL-----------------FNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK 289 (290)
T ss_pred HH-----------------HHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence 11 111111222233445667899999999999999999999999999998764
No 93
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=4.4e-38 Score=330.67 Aligned_cols=268 Identities=22% Similarity=0.321 Sum_probs=200.8
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.++|+..+.||+|+||.||+|... +++.||+|++..... ......+.+|+.+++.++||||+++++++...+..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE-EGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVF 82 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc-cccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEE
Confidence 367899999999999999999875 688999999864432 222345678999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+. ++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 83 e~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 155 (303)
T cd07869 83 EYVH-TDLCQYMDK---HPGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSV 155 (303)
T ss_pred ECCC-cCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccC
Confidence 9996 588887753 245688999999999999999999999 999999999999999999999999999875432
Q ss_pred CCccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchh-hHHHh--hccccccH---HH
Q 005001 568 TERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQ-SLVRW--ATPQLHDI---DA 640 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~-~~~~~--~~~~~~~~---~~ 640 (720)
.. .......||+.|+|||++.+ ..++.++||||+||++|||++|..||......... ..+.. ..+..... ..
T Consensus 156 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
T cd07869 156 PS-HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHS 234 (303)
T ss_pred CC-ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhh
Confidence 22 12233568999999999876 45889999999999999999999999865432111 11100 11100000 00
Q ss_pred HHhhcccccCCCCC---------hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 641 LAKMVDPALNGMYP---------AKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 641 ~~~~~~~~~~~~~~---------~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.............+ ...+..+.+|+.+||+.||++|||++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 235 LPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred ccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 00000000000001 0123467899999999999999999999864
No 94
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=8.2e-39 Score=340.45 Aligned_cols=253 Identities=25% Similarity=0.314 Sum_probs=206.0
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
++|...+.||+|+||.||+|... +|+.||+|+++.... .......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 46888999999999999999765 688999999976543 2334566788999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++|+|.++++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 154 (330)
T cd05601 81 EYQPGGDLLSLLNRY---EDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTA 154 (330)
T ss_pred CCCCCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence 999999999999732 35789999999999999999999999 999999999999999999999999999986654
Q ss_pred CCccccccccccccccCccccc------cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHH
Q 005001 568 TERQVSTQMVGAFGYSAPEFAL------SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDAL 641 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (720)
..........||+.|+|||++. +..++.++|||||||++|||++|+.||........ .
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~----------------~ 218 (330)
T cd05601 155 NKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKT----------------Y 218 (330)
T ss_pred CCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHH----------------H
Confidence 3333333457999999999987 45678999999999999999999999976433211 1
Q ss_pred Hhhcccc--cCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 642 AKMVDPA--LNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 642 ~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.++.... .........+..+.+|+.+||+ +|.+||++++++++
T Consensus 219 ~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 219 NNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred HHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 1111111 1111122356778899999998 99999999999865
No 95
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2.2e-38 Score=335.85 Aligned_cols=244 Identities=24% Similarity=0.373 Sum_probs=199.9
Q ss_pred ceeccCCCcEEEEEEE----cCCcEEEEEEcccccc--ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 416 FLIGEGSLGRVYRAEF----ANGKIMAVKKIDNAAL--SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
+.||+|+||.||+++. .+++.||+|.++.... .......+.+|+.+++.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999975 3578999999875432 222345677899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
+++|+|.+++.. .+.+.+..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (323)
T cd05584 82 LSGGELFMHLER----EGIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG 154 (323)
T ss_pred CCCchHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC
Confidence 999999999862 45688899999999999999999999 99999999999999999999999999987543222
Q ss_pred ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccccc
Q 005001 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPAL 649 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (720)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...++....
T Consensus 155 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~----------------~~~~~~~~~- 216 (323)
T cd05584 155 -TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK----------------TIDKILKGK- 216 (323)
T ss_pred -CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH----------------HHHHHHcCC-
Confidence 12234579999999999999999999999999999999999999997643211 111111111
Q ss_pred CCCCChhHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 005001 650 NGMYPAKSLSRFADIIALCVQPEPEFRP-----PMSEVVQA 685 (720)
Q Consensus 650 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~ell~~ 685 (720)
...+...+..+.+++.+||+.||++|| ++.+++++
T Consensus 217 -~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 217 -LNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred -CCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 123445567889999999999999999 78888774
No 96
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2.6e-38 Score=335.52 Aligned_cols=247 Identities=25% Similarity=0.378 Sum_probs=198.9
Q ss_pred CCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHH---hhcCCCCCccccceEEeecCeEEEE
Q 005001 412 FSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSN---MSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 412 y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~---l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
|++.+.||+|+||.||+|.+. +++.||+|+++.... .......+.+|..+ ++.++||||+++++++...+..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 567889999999999999765 689999999975432 22234456666554 4567899999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||+++|+|..+++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 81 ~E~~~~~~L~~~~~-----~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~ 152 (324)
T cd05589 81 MEYAAGGDLMMHIH-----TDVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGM 152 (324)
T ss_pred EcCCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCC
Confidence 99999999998885 35789999999999999999999999 99999999999999999999999999986533
Q ss_pred CCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||........ ...+..
T Consensus 153 ~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~----------------~~~i~~ 215 (324)
T cd05589 153 GFG-DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEV----------------FDSIVN 215 (324)
T ss_pred CCC-CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHH----------------HHHHHh
Confidence 222 122346799999999999999999999999999999999999999976432111 111111
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRP-----PMSEVVQA 685 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~ell~~ 685 (720)
.. ..++...+..+.+++.+||+.||.+|| ++.+++++
T Consensus 216 ~~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 216 DE--VRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred CC--CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 11 123445667889999999999999999 56777664
No 97
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=5.1e-38 Score=328.56 Aligned_cols=264 Identities=27% Similarity=0.454 Sum_probs=212.8
Q ss_pred HHHhcCCCccceeccCCCcEEEEEEEcC------CcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEe
Q 005001 406 QTATNSFSQEFLIGEGSLGRVYRAEFAN------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCA 478 (720)
Q Consensus 406 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 478 (720)
....++|+..+.||+|+||.||++.... ...+|+|.+.... .......+.+|++++.++ +|+||+++++++.
T Consensus 8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 86 (293)
T cd05053 8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT 86 (293)
T ss_pred ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc
Confidence 3445678889999999999999997642 3678999887543 334456788999999999 8999999999999
Q ss_pred ecCeEEEEEEecCCCCHHHHhhhcc------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCE
Q 005001 479 EHGQRLLVYEYVGNGNLHDMLHFAD------------DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANI 546 (720)
Q Consensus 479 ~~~~~~lV~e~~~~gsL~~~l~~~~------------~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NI 546 (720)
..+..++||||+++|+|.++++... .....+++..++.++.|++.||+|||+. +|+||||||+||
T Consensus 87 ~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Ni 163 (293)
T cd05053 87 QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNV 163 (293)
T ss_pred CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeE
Confidence 9999999999999999999996422 2345789999999999999999999998 999999999999
Q ss_pred EeCCCCceEEcccCCCccCCCCCccc-cccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcch
Q 005001 547 LLDDELNPHLSDCGLAALTPNTERQV-STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSE 624 (720)
Q Consensus 547 ll~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~ 624 (720)
+++.++.+||+|||+++......... .....++..|+|||.+.+..++.++|||||||++|||++ |..||.......
T Consensus 164 l~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~- 242 (293)
T cd05053 164 LVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE- 242 (293)
T ss_pred EEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH-
Confidence 99999999999999998664432211 122235678999999999999999999999999999998 999986543211
Q ss_pred hhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHH
Q 005001 625 QSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLV 690 (720)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~ 690 (720)
..+..........+...+..+.+++.+||..||++|||+.|+++.|++++
T Consensus 243 ----------------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 243 ----------------LFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred ----------------HHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 11111112222234456678999999999999999999999999999875
No 98
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=3.4e-38 Score=338.71 Aligned_cols=249 Identities=24% Similarity=0.379 Sum_probs=197.2
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
.+|+..+.||+|+||.||+|.+. +++.||+|++.... .......+.+|+++++.++|+||+++++++...+..++|||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 152 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH-EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLE 152 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC-cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEe
Confidence 44666788999999999999765 68999999986433 33445678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+++|+|.+. ....+..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 153 ~~~~~~L~~~--------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~ 221 (353)
T PLN00034 153 FMDGGSLEGT--------HIADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQT 221 (353)
T ss_pred cCCCCccccc--------ccCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceecccc
Confidence 9999998653 2345677889999999999999999 9999999999999999999999999999765432
Q ss_pred CccccccccccccccCcccccc-----CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHh
Q 005001 569 ERQVSTQMVGAFGYSAPEFALS-----GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAK 643 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (720)
.. ......||..|+|||++.. ...+.++|||||||++|||++|+.||............ .
T Consensus 222 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~--------------~ 286 (353)
T PLN00034 222 MD-PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLM--------------C 286 (353)
T ss_pred cc-cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHH--------------H
Confidence 21 2234579999999998753 23456899999999999999999999743322111111 1
Q ss_pred hcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 644 MVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 644 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
..........+...+.++.+||.+||+.||++||++.|++++
T Consensus 287 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 287 AICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred HHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 010111122334566789999999999999999999999976
No 99
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=4.8e-38 Score=322.77 Aligned_cols=255 Identities=25% Similarity=0.446 Sum_probs=208.6
Q ss_pred HhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
..++|+..++||+|+||.||+|..++++.||+|.+..... ....+.+|+.++++++|+||+++++++. .+..++||
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~ 79 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM---SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIIT 79 (260)
T ss_pred chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC---cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEE
Confidence 3467888999999999999999988899999999875443 2457889999999999999999999864 56789999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+.+++|.+++... ....+++.++..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++.....
T Consensus 80 e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05067 80 EYMENGSLVDFLKTP--EGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIED 154 (260)
T ss_pred EcCCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCC
Confidence 999999999998632 345789999999999999999999998 999999999999999999999999999876653
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
..........++..|+|||++.+..++.++||||||+++|||++ |+.||......... +.+.
T Consensus 155 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~-----------------~~~~ 217 (260)
T cd05067 155 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVI-----------------QNLE 217 (260)
T ss_pred CCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHH-----------------HHHH
Confidence 32222233456778999999999999999999999999999999 99999754322111 1111
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVR 688 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~ 688 (720)
.......+...+.++.+++.+||+.+|++||++++++..|+.
T Consensus 218 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 218 RGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 111122334456789999999999999999999999998864
No 100
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.6e-37 Score=320.06 Aligned_cols=261 Identities=25% Similarity=0.421 Sum_probs=213.4
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
++|+..+.||+|+||.||+|... +|+.||+|.++.... .....+.+.+|++++++++|+||+++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57888999999999999999776 789999998864322 3344678899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++++|.+++.........+++.++..++.|++.||+|||+. +|+||||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 99999999999875544456789999999999999999999999 999999999999999999999999999876543
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
... ......|++.|+|||.+.+..++.++|||||||++|+|++|+.||....... .. ..+....
T Consensus 159 ~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~--------------~~~~~~~ 222 (267)
T cd08224 159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-YS--------------LCKKIEK 222 (267)
T ss_pred CCc-ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccH-HH--------------HHhhhhc
Confidence 221 1233468899999999999999999999999999999999999996433110 00 0011111
Q ss_pred ccCCCCCh-hHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 005001 648 ALNGMYPA-KSLSRFADIIALCVQPEPEFRPPMSEVVQALVRL 689 (720)
Q Consensus 648 ~~~~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~ 689 (720)
......+. ..+..+.+++.+||..+|++||++.+|++.|.++
T Consensus 223 ~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 223 CDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred CCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 11111222 4566889999999999999999999999999876
No 101
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=9.4e-38 Score=320.05 Aligned_cols=247 Identities=27% Similarity=0.403 Sum_probs=201.7
Q ss_pred eeccCCCcEEEEEEEc---CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecCCC
Q 005001 417 LIGEGSLGRVYRAEFA---NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNG 493 (720)
Q Consensus 417 ~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 493 (720)
.||+|+||.||+|.++ +++.+|+|+++.........+.+.+|+.+++.++||||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 5899999999999653 5788999998765545555678899999999999999999999875 45679999999999
Q ss_pred CHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccc-
Q 005001 494 NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV- 572 (720)
Q Consensus 494 sL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~- 572 (720)
+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||.||+++.++.+||+|||++..........
T Consensus 81 ~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 81 PLNKFLQK----NKHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred cHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence 99999862 35689999999999999999999999 99999999999999999999999999997664433211
Q ss_pred -cccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccC
Q 005001 573 -STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALN 650 (720)
Q Consensus 573 -~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (720)
.....++..|+|||.+.+..++.++|||||||++|||++ |..||........ .+.+.....
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-----------------~~~i~~~~~ 216 (257)
T cd05116 154 AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEV-----------------TQMIESGER 216 (257)
T ss_pred ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH-----------------HHHHHCCCC
Confidence 112234678999999988889999999999999999998 9999975432211 111112222
Q ss_pred CCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 005001 651 GMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVR 688 (720)
Q Consensus 651 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~ 688 (720)
...+...+.++.++|.+||+.||++||++.+|.+.|++
T Consensus 217 ~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 217 MECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred CCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 23455677889999999999999999999999999865
No 102
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=6.7e-38 Score=321.68 Aligned_cols=254 Identities=30% Similarity=0.481 Sum_probs=206.9
Q ss_pred hcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
.++|++.+.||+|+||.||+|...++..+|+|.+...... ...+.+|+.++++++|+|++++++++. .+..++|||
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e 80 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMS---PESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTE 80 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCC---HHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEE
Confidence 4578889999999999999999888889999999754432 356889999999999999999999875 456899999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+++++|.++++.. ....+++.++..++.|++.||+|||+. +++||||||+||++++++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05070 81 YMSKGSLLDFLKDG--EGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDN 155 (260)
T ss_pred ecCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCc
Confidence 99999999998732 235689999999999999999999999 9999999999999999999999999999765443
Q ss_pred CccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
.........++..|+|||.+.+..++.++||||||+++|||++ |..||........ ... +..
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~----------------~~~-~~~ 218 (260)
T cd05070 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREV----------------LEQ-VER 218 (260)
T ss_pred ccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHH----------------HHH-HHc
Confidence 3222223345678999999998899999999999999999999 8899965432111 111 111
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVR 688 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~ 688 (720)
......+...+..+.+++.+||..+|++||++.++.+.|++
T Consensus 219 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 219 GYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 11222344566789999999999999999999999988864
No 103
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1e-37 Score=321.65 Aligned_cols=262 Identities=23% Similarity=0.384 Sum_probs=212.9
Q ss_pred cCCCccceeccCCCcEEEEEEE-cCCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.+|...+.||+|+||.||+|.. .+++.+++|.+..... .......+.+|+.+++.++||||+++++++...+..++||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 3677888999999999999975 4789999998864332 3344567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++++|.++++........+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 99999999999875444456789999999999999999999999 999999999999999999999999999876543
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
... ......|+..|+|||.+.+..++.++||||||+++|||++|..||......... ........
T Consensus 159 ~~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~--------------~~~~~~~~ 223 (267)
T cd08229 159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS--------------LCKKIEQC 223 (267)
T ss_pred CCc-ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHH--------------HhhhhhcC
Confidence 222 122346889999999999999999999999999999999999999653321100 00111111
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRL 689 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~ 689 (720)
......+...+..+.+++.+||+.||++|||+.+|++.+.++
T Consensus 224 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 224 DYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred CCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 111112234667899999999999999999999999999876
No 104
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=9.4e-38 Score=324.30 Aligned_cols=264 Identities=24% Similarity=0.390 Sum_probs=213.0
Q ss_pred HhcCCCccceeccCCCcEEEEEEEcC-----CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEee-cC
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFAN-----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE-HG 481 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~ 481 (720)
..++|...+.||+|+||.||+|.+.+ +..|++|++.... .......+.+|+.++++++||||+++++++.. +.
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 82 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA-SEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE 82 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 34678888999999999999998765 6889999886432 44556778899999999999999999998765 56
Q ss_pred eEEEEEEecCCCCHHHHhhhccCC----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEc
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDS----SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLS 557 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~----~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~ 557 (720)
..++++||+++++|.+++...... ...+++.++..++.|++.||+|||+. +++||||||+||++++++.+||+
T Consensus 83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~ 159 (280)
T cd05043 83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKIT 159 (280)
T ss_pred CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEEC
Confidence 789999999999999998754322 15689999999999999999999998 99999999999999999999999
Q ss_pred ccCCCccCCCCCcc-ccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhcccc
Q 005001 558 DCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQL 635 (720)
Q Consensus 558 Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 635 (720)
|||+++.+...... ......++..|+|||++.+..++.++|||||||++||+++ |+.||....+....
T Consensus 160 d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~---------- 229 (280)
T cd05043 160 DNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMA---------- 229 (280)
T ss_pred CCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHH----------
Confidence 99999865433222 1122346778999999999999999999999999999999 99999764332111
Q ss_pred ccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHh
Q 005001 636 HDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQR 692 (720)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~ 692 (720)
...........+..++..+.+++.+||+.||++||++.++++.|.++.++
T Consensus 230 -------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 230 -------AYLKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred -------HHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 11111111122334567889999999999999999999999999988653
No 105
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.2e-37 Score=322.06 Aligned_cols=257 Identities=25% Similarity=0.416 Sum_probs=203.1
Q ss_pred CccceeccCCCcEEEEEEEcCC-c--EEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec------CeE
Q 005001 413 SQEFLIGEGSLGRVYRAEFANG-K--IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH------GQR 483 (720)
Q Consensus 413 ~~~~~lG~G~fg~Vy~~~~~~~-~--~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~ 483 (720)
.+.+.||+|+||.||+|.+.+. . .||+|.++...........+.+|+.+++.++|+||+++++++... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 4567899999999999987543 2 589999876555556677889999999999999999999986432 246
Q ss_pred EEEEEecCCCCHHHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCC
Q 005001 484 LLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~--~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 561 (720)
++||||+++|+|.+++.... .....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCCc
Confidence 89999999999999875322 2234589999999999999999999998 999999999999999999999999999
Q ss_pred CccCCCCCccc-cccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHH
Q 005001 562 AALTPNTERQV-STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDID 639 (720)
Q Consensus 562 a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 639 (720)
+.......... .....+++.|+|||.+.+..++.++|||||||++|||++ |+.||....... ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~~----------- 224 (272)
T cd05075 159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSE---IY----------- 224 (272)
T ss_pred ccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---HH-----------
Confidence 98664332211 122346778999999999999999999999999999999 888986533211 10
Q ss_pred HHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 005001 640 ALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRL 689 (720)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~ 689 (720)
.... .......+...+..+.+++.+||+.||++||++.++++.|+++
T Consensus 225 --~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 225 --DYLR-QGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred --HHHH-cCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1111 1111123345667789999999999999999999999999875
No 106
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=4.3e-38 Score=326.79 Aligned_cols=250 Identities=22% Similarity=0.342 Sum_probs=200.9
Q ss_pred eccCCCcEEEEEEEc-CCcEEEEEEccccccC-hHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecCCCCH
Q 005001 418 IGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNL 495 (720)
Q Consensus 418 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 495 (720)
||+|+||+||++... +++.||+|++...... ......+..|+++++.++|+||+++.+++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999765 6889999998654332 22335677899999999999999999999999999999999999999
Q ss_pred HHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCcccccc
Q 005001 496 HDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQ 575 (720)
Q Consensus 496 ~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 575 (720)
.+++.........+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++........ ....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-~~~~ 156 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS-KTKG 156 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-cccc
Confidence 988864444456799999999999999999999999 999999999999999999999999999876543222 2234
Q ss_pred ccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCCCh
Q 005001 576 MVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPA 655 (720)
Q Consensus 576 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (720)
..||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ......... ...++.
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~------------~~~~~~~~~--~~~~~~ 222 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK------------ELKQRILND--SVTYPD 222 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHH------------HHHHhhccc--CCCCcc
Confidence 578999999999999999999999999999999999999997543221110 011111111 112344
Q ss_pred hHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 005001 656 KSLSRFADIIALCVQPEPEFRP-----PMSEVVQA 685 (720)
Q Consensus 656 ~~~~~l~~li~~cl~~dP~~RP-----s~~ell~~ 685 (720)
..+..+.+++.+||+.||++|| ++++++++
T Consensus 223 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 223 KFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 5667889999999999999999 66777764
No 107
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-38 Score=348.41 Aligned_cols=262 Identities=23% Similarity=0.330 Sum_probs=213.0
Q ss_pred HhcCCCccceeccCCCcEEEEEEEcCC-cEEEEEEccccccChHHHHHHHHHHHHhhcCC-CCCccccceE-Eee-----
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFANG-KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGY-CAE----- 479 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~-~~~----- 479 (720)
...++++++.|.+|||+.||+|....+ ..||+|++-.. .......+.+|+++|++++ |+|||.+++. ...
T Consensus 35 g~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~ 112 (738)
T KOG1989|consen 35 GSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNN 112 (738)
T ss_pred CCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCC
Confidence 345677889999999999999988766 99999999654 4566778899999999995 9999999993 211
Q ss_pred -cCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcc
Q 005001 480 -HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSD 558 (720)
Q Consensus 480 -~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~D 558 (720)
.-+.+|.||||.||.|-|++.... ...+++.++++|+.|+++|+++||.. .|+|||||||-|||||+.+|..||||
T Consensus 113 ~~~EvllLmEyC~gg~Lvd~mn~Rl--q~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCD 189 (738)
T KOG1989|consen 113 GVWEVLLLMEYCKGGSLVDFMNTRL--QTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCD 189 (738)
T ss_pred ceeEEEeehhhccCCcHHHHHHHHH--hccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCc
Confidence 136789999999999999997433 34599999999999999999999987 56899999999999999999999999
Q ss_pred cCCCccCCCCC-ccc-------cccccccccccCccccc---cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhH
Q 005001 559 CGLAALTPNTE-RQV-------STQMVGAFGYSAPEFAL---SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSL 627 (720)
Q Consensus 559 fg~a~~~~~~~-~~~-------~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~ 627 (720)
||.+.-.-... ... .....-|+-|+|||++. +..+++|+|||+|||+||-|+....||+....
T Consensus 190 FGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~------ 263 (738)
T KOG1989|consen 190 FGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK------ 263 (738)
T ss_pred ccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc------
Confidence 99986322111 111 11245799999999874 67799999999999999999999999986422
Q ss_pred HHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhc
Q 005001 628 VRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRAS 694 (720)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 694 (720)
..++...+........+..+.+||+.||+.||.+||++-+++.++.++.+..-
T Consensus 264 --------------laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~ 316 (738)
T KOG1989|consen 264 --------------LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPC 316 (738)
T ss_pred --------------eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCC
Confidence 12333344333345678899999999999999999999999999998876543
No 108
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.1e-38 Score=342.15 Aligned_cols=252 Identities=25% Similarity=0.348 Sum_probs=203.0
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
++|+..+.||+|+||.||+|... +++.||+|++..... .......+.+|+.++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 46888999999999999999775 689999999975432 2234456788999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.++|+|||++.....
T Consensus 81 E~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 153 (364)
T cd05599 81 EYLPGGDMMTLLMK----KDTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKK 153 (364)
T ss_pred CCCCCcHHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceeccc
Confidence 99999999999863 45789999999999999999999999 999999999999999999999999999865422
Q ss_pred CCcc-------------------------------------ccccccccccccCccccccCCCcccchhhhHHHHHHHHH
Q 005001 568 TERQ-------------------------------------VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELL 610 (720)
Q Consensus 568 ~~~~-------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ell 610 (720)
.... .....+||+.|+|||++.+..++.++|||||||++|||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~ 233 (364)
T cd05599 154 SHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEML 233 (364)
T ss_pred cccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhh
Confidence 1100 011246999999999999999999999999999999999
Q ss_pred hCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccc--cCCCCChhHHHHHHHHHHHhcCCCCCCCCC---HHHHHHH
Q 005001 611 TGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPA--LNGMYPAKSLSRFADIIALCVQPEPEFRPP---MSEVVQA 685 (720)
Q Consensus 611 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~ell~~ 685 (720)
+|..||....+.... .++.... .........+..+.+++.+|+. +|.+|++ +.+++++
T Consensus 234 ~G~~Pf~~~~~~~~~----------------~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 234 VGYPPFCSDNPQETY----------------RKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred cCCCCCCCCCHHHHH----------------HHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 999999765432111 1111111 1111111345678899999997 9999997 9998875
No 109
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-39 Score=334.48 Aligned_cols=249 Identities=29% Similarity=0.436 Sum_probs=208.6
Q ss_pred hcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
...|...+.||.|+||.||-|++ .+.+.||||++..... +.+.+.+++.|+..+++++|||++.+.|+|-.+...|+|
T Consensus 25 Eklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLV 104 (948)
T KOG0577|consen 25 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLV 104 (948)
T ss_pred HHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHH
Confidence 34567778899999999999965 4788999999974432 455678999999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
||||-| +-.|++... .+++.+.++..|..+.+.||+|||+. +.||||||+.|||+++.|.|||+|||.|....
T Consensus 105 MEYClG-SAsDlleVh---kKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~ 177 (948)
T KOG0577|consen 105 MEYCLG-SASDLLEVH---KKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMA 177 (948)
T ss_pred HHHHhc-cHHHHHHHH---hccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcC
Confidence 999965 777877643 57888999999999999999999999 99999999999999999999999999987654
Q ss_pred CCCccccccccccccccCccccc---cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHh
Q 005001 567 NTERQVSTQMVGAFGYSAPEFAL---SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAK 643 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (720)
+ ...++|||.|||||++. .+.|+-++||||||++..||...++|+..++.. ..+..
T Consensus 178 P-----AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAM----------------SALYH 236 (948)
T KOG0577|consen 178 P-----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM----------------SALYH 236 (948)
T ss_pred c-----hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHH----------------HHHHH
Confidence 3 34689999999999986 477999999999999999999999998765432 22222
Q ss_pred hcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 644 MVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 644 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+...........+.+..+.+|+..||++-|.+|||..+++++
T Consensus 237 IAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 237 IAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred HHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 222221122245678889999999999999999999998875
No 110
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.8e-38 Score=342.36 Aligned_cols=261 Identities=19% Similarity=0.279 Sum_probs=199.9
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.++|+..+.||+|+||.||+|.+. +++.||+|+.. ...+.+|++++++++||||+++++++...+..++|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~--------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~ 162 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ--------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLIL 162 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh--------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEE
Confidence 467999999999999999999764 68899999653 234678999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
|++. ++|.+++.. ...+++.+++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 163 e~~~-~~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~ 234 (391)
T PHA03212 163 PRYK-TDLYCYLAA----KRNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVD 234 (391)
T ss_pred ecCC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccccccc
Confidence 9995 688888762 45689999999999999999999999 999999999999999999999999999975433
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcch-----h---hHHHhh-c-c-cc-
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSE-----Q---SLVRWA-T-P-QL- 635 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~-----~---~~~~~~-~-~-~~- 635 (720)
..........||+.|+|||++.+..++.++|||||||++|||++|+.||........ . ..+... . + .+
T Consensus 235 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~ 314 (391)
T PHA03212 235 INANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFP 314 (391)
T ss_pred ccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcC
Confidence 222233346799999999999999999999999999999999999988764332110 0 011000 0 0 00
Q ss_pred -ccHHHHHhh----cccccC--CCCC-----hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 636 -HDIDALAKM----VDPALN--GMYP-----AKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 636 -~~~~~~~~~----~~~~~~--~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.....+... ...... ...+ ...+.++.+|+.+||+.||++|||++|++++
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 315 IDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred cchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 000011110 000000 0000 1245678999999999999999999999965
No 111
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=3.7e-38 Score=341.81 Aligned_cols=252 Identities=22% Similarity=0.279 Sum_probs=200.6
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
.|+..+.||+|+||+||+|... +++.||+|++..... .......+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5788899999999999999664 688999999975432 33345678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 82 ~~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~ 154 (381)
T cd05626 82 YIPGGDMMSLLIR----MEVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWT 154 (381)
T ss_pred cCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCcccccc
Confidence 9999999999863 45688999999999999999999999 9999999999999999999999999997532110
Q ss_pred C----------------------------------------------ccccccccccccccCccccccCCCcccchhhhH
Q 005001 569 E----------------------------------------------RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSF 602 (720)
Q Consensus 569 ~----------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSl 602 (720)
. .......+||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (381)
T cd05626 155 HNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSV 234 (381)
T ss_pred cccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeeh
Confidence 0 000123579999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc--cccCCCCChhHHHHHHHHHHHh--cCCCCCCCCC
Q 005001 603 GVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD--PALNGMYPAKSLSRFADIIALC--VQPEPEFRPP 678 (720)
Q Consensus 603 Gv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~c--l~~dP~~RPs 678 (720)
||++|||++|+.||....+..... ++.. ...........+.++.+++.+| +..+|..||+
T Consensus 235 G~il~elltG~~Pf~~~~~~~~~~----------------~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~ 298 (381)
T cd05626 235 GVILFEMLVGQPPFLAPTPTETQL----------------KVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNG 298 (381)
T ss_pred hhHHHHHHhCCCCCcCCCHHHHHH----------------HHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCC
Confidence 999999999999997654321111 1111 0111111223456788899884 4556666999
Q ss_pred HHHHHHH
Q 005001 679 MSEVVQA 685 (720)
Q Consensus 679 ~~ell~~ 685 (720)
+.+++++
T Consensus 299 ~~~~l~h 305 (381)
T cd05626 299 ADDIKAH 305 (381)
T ss_pred HHHHhcC
Confidence 9999976
No 112
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.3e-37 Score=324.67 Aligned_cols=262 Identities=25% Similarity=0.422 Sum_probs=209.7
Q ss_pred hcCCCccceeccCCCcEEEEEEEc------CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCe
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (720)
.++|.+.+.||+|+||.||++... ++..+|+|.+... .......+.+|++++++++||||+++++++...+.
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 81 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence 356888899999999999999742 3456899988643 23445678899999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHhhhcc---------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCc
Q 005001 483 RLLVYEYVGNGNLHDMLHFAD---------DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN 553 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~---------~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~ 553 (720)
.++||||+++++|.+++.... .....+++.++..++.|++.||+|||+. +++||||||+||++++++.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~ 158 (288)
T cd05093 82 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLL 158 (288)
T ss_pred cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCc
Confidence 999999999999999997432 1223589999999999999999999999 9999999999999999999
Q ss_pred eEEcccCCCccCCCCCcc-ccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhh
Q 005001 554 PHLSDCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWA 631 (720)
Q Consensus 554 ~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~ 631 (720)
++|+|||++......... ......++..|+|||++.+..++.++|||||||++|||++ |..||........
T Consensus 159 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~------- 231 (288)
T cd05093 159 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV------- 231 (288)
T ss_pred EEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH-------
Confidence 999999998765432211 1222345778999999999999999999999999999999 8999875432211
Q ss_pred ccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHh
Q 005001 632 TPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQR 692 (720)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~ 692 (720)
...+..... ...+...+.++.+++.+||+.||.+||++.++++.|+++.+.
T Consensus 232 ---------~~~i~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 232 ---------IECITQGRV-LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred ---------HHHHHcCCc-CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 111111111 112233556789999999999999999999999999998754
No 113
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.3e-37 Score=321.83 Aligned_cols=258 Identities=23% Similarity=0.423 Sum_probs=206.6
Q ss_pred CCccceeccCCCcEEEEEEEcC----CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCe-----
Q 005001 412 FSQEFLIGEGSLGRVYRAEFAN----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ----- 482 (720)
Q Consensus 412 y~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 482 (720)
|...+.||+|+||.||+|.... +..||+|+++...........+.+|+..++.++||||+++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 4567889999999999997642 3679999998665555566788999999999999999999998766544
Q ss_pred -EEEEEEecCCCCHHHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEccc
Q 005001 483 -RLLVYEYVGNGNLHDMLHFADD--SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDC 559 (720)
Q Consensus 483 -~~lV~e~~~~gsL~~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Df 559 (720)
.++|+||+++|+|.+++..... ....+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 7999999999999998854321 234689999999999999999999999 9999999999999999999999999
Q ss_pred CCCccCCCCCccc-cccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhcccccc
Q 005001 560 GLAALTPNTERQV-STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHD 637 (720)
Q Consensus 560 g~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 637 (720)
|+++......... .....++..|+|||.+.+..++.++|||||||++|||++ |..||.......
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~-------------- 223 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE-------------- 223 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH--------------
Confidence 9998654332221 112235678999999998899999999999999999999 888886533211
Q ss_pred HHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 005001 638 IDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRL 689 (720)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~ 689 (720)
....... ......+...+..+.+++.+||+.||++||++.|+++.|.++
T Consensus 224 --~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 224 --IYDYLRH-GNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred --HHHHHHc-CCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1111111 111223445677899999999999999999999999999875
No 114
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.5e-38 Score=337.56 Aligned_cols=244 Identities=23% Similarity=0.337 Sum_probs=199.9
Q ss_pred ceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecCCC
Q 005001 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNG 493 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 493 (720)
+.||+|+||.||++... +|+.||+|.+..... .......+.+|++++..++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999764 689999999975432 2334566788999999999999999999999999999999999999
Q ss_pred CHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccc
Q 005001 494 NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHE-VCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (720)
Q Consensus 494 sL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~-~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 572 (720)
+|.+++. ....+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||++........ .
T Consensus 81 ~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~-~ 152 (325)
T cd05594 81 ELFFHLS----RERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-T 152 (325)
T ss_pred cHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc-c
Confidence 9999886 24578999999999999999999997 6 999999999999999999999999999875432221 2
Q ss_pred cccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCC
Q 005001 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGM 652 (720)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (720)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .+... ...
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~----------------~i~~~--~~~ 214 (325)
T cd05594 153 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE----------------LILME--EIR 214 (325)
T ss_pred cccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHH----------------HHhcC--CCC
Confidence 233579999999999999999999999999999999999999997543211111 11111 112
Q ss_pred CChhHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 005001 653 YPAKSLSRFADIIALCVQPEPEFRP-----PMSEVVQA 685 (720)
Q Consensus 653 ~~~~~~~~l~~li~~cl~~dP~~RP-----s~~ell~~ 685 (720)
++...+.++.+++.+||+.||++|+ ++.+++++
T Consensus 215 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 215 FPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred CCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 3445567889999999999999996 89999866
No 115
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.5e-37 Score=324.72 Aligned_cols=262 Identities=24% Similarity=0.405 Sum_probs=210.6
Q ss_pred cCCCccceeccCCCcEEEEEEEc------CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (720)
.+|...+.||+|+||.||+|... ++..+++|.+.... ......+.+|++.+++++|+||+++++++...+..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 82 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT--LAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPL 82 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc--HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCce
Confidence 45777889999999999999643 35568889886433 33456788999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhccC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCC
Q 005001 484 LLVYEYVGNGNLHDMLHFADD------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE 551 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~ 551 (720)
++||||+++++|.++++.... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~ 159 (291)
T cd05094 83 IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGAN 159 (291)
T ss_pred EEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccC
Confidence 999999999999999974321 224589999999999999999999999 99999999999999999
Q ss_pred CceEEcccCCCccCCCCCc-cccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHH
Q 005001 552 LNPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVR 629 (720)
Q Consensus 552 ~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~ 629 (720)
+.++|+|||++........ .......++..|+|||.+.+..++.++|||||||++|||+| |..||.........
T Consensus 160 ~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~---- 235 (291)
T cd05094 160 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVI---- 235 (291)
T ss_pred CcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH----
Confidence 9999999999876543221 11233456789999999999999999999999999999999 99998764432111
Q ss_pred hhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 630 WATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
..+.. ......+...+..+.+++.+||+.||++||+++++++.|+++.+..
T Consensus 236 ------------~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~ 286 (291)
T cd05094 236 ------------ECITQ-GRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKAT 286 (291)
T ss_pred ------------HHHhC-CCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhc
Confidence 11111 1111123345677899999999999999999999999999986653
No 116
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.7e-37 Score=325.34 Aligned_cols=263 Identities=27% Similarity=0.432 Sum_probs=208.4
Q ss_pred cCCCccceeccCCCcEEEEEEEcC-Cc--EEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFAN-GK--IMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 485 (720)
++|+..+.||+|+||.||+|...+ +. .+++|.++... .....+.+.+|+.++.++ +||||+++++++...+..++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 80 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA-SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI 80 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC-CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence 468888999999999999997653 33 46888876322 334456788999999999 79999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCc
Q 005001 486 VYEYVGNGNLHDMLHFADD------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN 553 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~ 553 (720)
|+||+++++|.++++.... ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~ 157 (297)
T cd05089 81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLA 157 (297)
T ss_pred EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCe
Confidence 9999999999999964321 123588999999999999999999998 9999999999999999999
Q ss_pred eEEcccCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhc
Q 005001 554 PHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWAT 632 (720)
Q Consensus 554 ~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~ 632 (720)
+||+|||++........ ......+..|+|||++.+..++.++|||||||++|||++ |..||........
T Consensus 158 ~kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~-------- 227 (297)
T cd05089 158 SKIADFGLSRGEEVYVK--KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAEL-------- 227 (297)
T ss_pred EEECCcCCCccccceec--cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH--------
Confidence 99999999864321111 111223557999999999999999999999999999998 9999975432111
Q ss_pred cccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhcc
Q 005001 633 PQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 695 (720)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~~ 695 (720)
..+ .........+..++..+.+++.+||+.+|.+||++.++++.|+++.+....
T Consensus 228 --------~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~ 281 (297)
T cd05089 228 --------YEK-LPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKA 281 (297)
T ss_pred --------HHH-HhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 111 111122223445667889999999999999999999999999999876643
No 117
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=6.9e-38 Score=339.33 Aligned_cols=265 Identities=26% Similarity=0.411 Sum_probs=211.4
Q ss_pred HHHhcCCCccceeccCCCcEEEEEEEc------CCcEEEEEEccccccChHHHHHHHHHHHHhhcCC-CCCccccceEEe
Q 005001 406 QTATNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCA 478 (720)
Q Consensus 406 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~ 478 (720)
+...++|.+.+.||+|+||.||+|.+. .++.||+|+++... .......+.+|+.++.++. ||||+++++++.
T Consensus 33 ~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~ 111 (401)
T cd05107 33 EMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA-RSSEKQALMSELKIMSHLGPHLNIVNLLGACT 111 (401)
T ss_pred eecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC-ChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence 334556888899999999999999764 34689999997543 2333457889999999997 999999999999
Q ss_pred ecCeEEEEEEecCCCCHHHHhhhccC------------------------------------------------------
Q 005001 479 EHGQRLLVYEYVGNGNLHDMLHFADD------------------------------------------------------ 504 (720)
Q Consensus 479 ~~~~~~lV~e~~~~gsL~~~l~~~~~------------------------------------------------------ 504 (720)
..+..++||||+++|+|.++++....
T Consensus 112 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (401)
T cd05107 112 KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP 191 (401)
T ss_pred cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence 99999999999999999999975321
Q ss_pred ----------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCC
Q 005001 505 ----------------------------------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSA 544 (720)
Q Consensus 505 ----------------------------------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~ 544 (720)
....+++..+..++.|++.||+|||+. +++||||||+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~ 268 (401)
T cd05107 192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAAR 268 (401)
T ss_pred hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcc
Confidence 112467788899999999999999998 9999999999
Q ss_pred CEEeCCCCceEEcccCCCccCCCCCc-cccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCc
Q 005001 545 NILLDDELNPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPR 622 (720)
Q Consensus 545 NIll~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~ 622 (720)
|||+++++.+||+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 269 NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~ 348 (401)
T cd05107 269 NVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN 348 (401)
T ss_pred eEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch
Confidence 99999999999999999976432221 11223457889999999999999999999999999999998 88998653321
Q ss_pred chhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHH
Q 005001 623 SEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLV 690 (720)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~ 690 (720)
. ...+.+........+...+..+.+++.+||+.+|++||+++||++.|++++
T Consensus 349 ~----------------~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 349 E----------------QFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred H----------------HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 1 111111222222334456778999999999999999999999999998875
No 118
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=8e-38 Score=338.32 Aligned_cols=267 Identities=22% Similarity=0.333 Sum_probs=205.7
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecC-----eEE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG-----QRL 484 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~ 484 (720)
+|+..+.||+|+||.||+|... +|+.||+|++............+.+|+.+++.++||||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4778889999999999999764 7899999998755434445567889999999999999999999998776 789
Q ss_pred EEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
+|+||+. ++|.+.+. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 81 lv~e~~~-~~l~~~~~----~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~ 152 (372)
T cd07853 81 VVTELMQ-SDLHKIIV----SPQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARV 152 (372)
T ss_pred EEeeccc-cCHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceee
Confidence 9999997 58888775 356789999999999999999999999 999999999999999999999999999976
Q ss_pred CCCCCccccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHh--hccccccHH--
Q 005001 565 TPNTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRW--ATPQLHDID-- 639 (720)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~--~~~~~~~~~-- 639 (720)
.............+|+.|+|||++.+. .++.++||||+||++|||++|+.||....+......+.. ..+......
T Consensus 153 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 232 (372)
T cd07853 153 EEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSA 232 (372)
T ss_pred cccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHh
Confidence 544333333445689999999999874 478999999999999999999999987654332222211 011111000
Q ss_pred --HHHhhccc-ccCC-------CCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 640 --ALAKMVDP-ALNG-------MYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 640 --~~~~~~~~-~~~~-------~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.....+.. .... ......+.++.+|+.+||+.||++|||+.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 233 CEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred hHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 00000000 0000 1112335678899999999999999999999976
No 119
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-38 Score=336.55 Aligned_cols=256 Identities=25% Similarity=0.411 Sum_probs=218.3
Q ss_pred CCccceeccCCCcEEEEEEE-cCCc----EEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 412 FSQEFLIGEGSLGRVYRAEF-ANGK----IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 412 y~~~~~lG~G~fg~Vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
.+.+++||+|+||+||+|.+ .+|+ +||+|++.... ..+...++++|+..|.+++|||++++++++.... ..||
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t-~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlv 775 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT-SPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLV 775 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccC-CchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHH
Confidence 34567899999999999954 4454 57888886544 4455678999999999999999999999997665 8899
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
++||+.|+|.|++++ .+..+-.+..+.+..|||+|+.|||++ ++|||||.++|||+.....+||.|||+++...
T Consensus 776 tq~mP~G~LlDyvr~---hr~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~ 849 (1177)
T KOG1025|consen 776 TQLMPLGCLLDYVRE---HRDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLA 849 (1177)
T ss_pred HHhcccchHHHHHHH---hhccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccC
Confidence 999999999999986 356788888999999999999999999 99999999999999999999999999999887
Q ss_pred CCCcccccc-ccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhh
Q 005001 567 NTERQVSTQ-MVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKM 644 (720)
Q Consensus 567 ~~~~~~~~~-~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (720)
.++...... ..-.+.|||-|.+....|+.++|||||||++||++| |..|+++..- +.+.+.
T Consensus 850 ~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~-----------------~eI~dl 912 (1177)
T KOG1025|consen 850 PDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA-----------------EEIPDL 912 (1177)
T ss_pred cccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCH-----------------HHhhHH
Confidence 766554432 234568999999999999999999999999999999 9999986432 334444
Q ss_pred cccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHh
Q 005001 645 VDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQR 692 (720)
Q Consensus 645 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~ 692 (720)
+....+...|+.++.++..+|.+||..|++.||+++++..++.++...
T Consensus 913 le~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 913 LEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred HhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 555556678889999999999999999999999999999999887653
No 120
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=5.4e-38 Score=338.37 Aligned_cols=253 Identities=23% Similarity=0.325 Sum_probs=199.5
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
++|+..+.||+|+||+||+|... +++.||+|++..... .......+.+|+.++..++|+||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 46888999999999999999765 588999999975432 2233456788999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++|+|.+++.. .+.+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~ 153 (363)
T cd05628 81 EFLPGGDMMTLLMK----KDTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKK 153 (363)
T ss_pred cCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCcccccc
Confidence 99999999999862 46789999999999999999999999 999999999999999999999999999875432
Q ss_pred CCc----------------------------------cccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCC
Q 005001 568 TER----------------------------------QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGR 613 (720)
Q Consensus 568 ~~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~ 613 (720)
... ......+||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~ 233 (363)
T cd05628 154 AHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (363)
T ss_pred cccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCC
Confidence 110 0012357999999999999999999999999999999999999
Q ss_pred CCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCCC--hhHHHHHHHHHHHhcC--CCCCCCCCHHHHHHH
Q 005001 614 KPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYP--AKSLSRFADIIALCVQ--PEPEFRPPMSEVVQA 685 (720)
Q Consensus 614 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~--~dP~~RPs~~ell~~ 685 (720)
.||....+.... .++........+| ...+.++.+++.+++. .++..||++.||+++
T Consensus 234 ~Pf~~~~~~~~~----------------~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 234 PPFCSETPQETY----------------KKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCCCCCCHHHHH----------------HHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 999765432111 1111100001111 1234567788887554 233356899999987
No 121
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.5e-37 Score=317.47 Aligned_cols=247 Identities=23% Similarity=0.402 Sum_probs=199.9
Q ss_pred eeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecCCCCH
Q 005001 417 LIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNL 495 (720)
Q Consensus 417 ~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 495 (720)
.||+|+||.||+|... +++.||+|.+.... .......+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETL-PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 6999999999999764 68899999886433 344567789999999999999999999999999999999999999999
Q ss_pred HHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccc-cc
Q 005001 496 HDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV-ST 574 (720)
Q Consensus 496 ~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~-~~ 574 (720)
.++++. ....+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.......... ..
T Consensus 81 ~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 154 (252)
T cd05084 81 LTFLRT---EGPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGG 154 (252)
T ss_pred HHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccCC
Confidence 999862 235689999999999999999999999 99999999999999999999999999987543221111 11
Q ss_pred cccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCC
Q 005001 575 QMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMY 653 (720)
Q Consensus 575 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (720)
...++..|+|||.+.++.++.++|||||||++|||++ |..||........ ............
T Consensus 155 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~-----------------~~~~~~~~~~~~ 217 (252)
T cd05084 155 MKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQT-----------------REAIEQGVRLPC 217 (252)
T ss_pred CCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHH-----------------HHHHHcCCCCCC
Confidence 1123457999999999999999999999999999998 8888865332111 111111122233
Q ss_pred ChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 005001 654 PAKSLSRFADIIALCVQPEPEFRPPMSEVVQALV 687 (720)
Q Consensus 654 ~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~ 687 (720)
+...+..+.+++.+||+.+|++||++.++++.|.
T Consensus 218 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 218 PELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 4456678999999999999999999999998874
No 122
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=2.4e-37 Score=315.54 Aligned_cols=247 Identities=25% Similarity=0.425 Sum_probs=201.7
Q ss_pred eeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecCCCCHH
Q 005001 417 LIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLH 496 (720)
Q Consensus 417 ~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 496 (720)
+||+|+||.||+|...++..||+|.+.... .......+.+|+++++.++||||+++++++...+..++||||+++++|.
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDL-PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 699999999999998889999999987543 3344557889999999999999999999999999999999999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccccccc
Q 005001 497 DMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQM 576 (720)
Q Consensus 497 ~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 576 (720)
+++.. ....+++..+..++.|++.||.|+|+. +++||||||+||+++.++.+||+|||++..............
T Consensus 81 ~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 154 (250)
T cd05085 81 SFLRK---KKDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLK 154 (250)
T ss_pred HHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccccCCCC
Confidence 98863 234678999999999999999999998 999999999999999999999999999875433221111222
Q ss_pred cccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCCCh
Q 005001 577 VGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPA 655 (720)
Q Consensus 577 ~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (720)
.++..|+|||++.+..++.++||||||+++|||++ |..||.......... .+........+.
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~-----------------~~~~~~~~~~~~ 217 (250)
T cd05085 155 QIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQARE-----------------QVEKGYRMSCPQ 217 (250)
T ss_pred CCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH-----------------HHHcCCCCCCCC
Confidence 44678999999999999999999999999999998 999997543211110 111111222344
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 005001 656 KSLSRFADIIALCVQPEPEFRPPMSEVVQALV 687 (720)
Q Consensus 656 ~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~ 687 (720)
..+..+.+++.+||+.+|++||++.|+++.|.
T Consensus 218 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 218 KCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 56678999999999999999999999998874
No 123
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=4.3e-38 Score=333.09 Aligned_cols=244 Identities=22% Similarity=0.370 Sum_probs=197.1
Q ss_pred ceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEEEEEecCC
Q 005001 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 492 (720)
+.||+|+||.||+|... +++.||+|++..... .......+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999775 588999999875432 223445667788887766 799999999999999999999999999
Q ss_pred CCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccc
Q 005001 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (720)
Q Consensus 493 gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 572 (720)
|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++....... ..
T Consensus 81 g~L~~~i~~----~~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~-~~ 152 (320)
T cd05590 81 GDLMFHIQK----SRRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG-KT 152 (320)
T ss_pred chHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC-Cc
Confidence 999998863 45789999999999999999999999 99999999999999999999999999987532221 12
Q ss_pred cccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCC
Q 005001 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGM 652 (720)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (720)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+.... ..
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~----------------~~~i~~~~--~~ 214 (320)
T cd05590 153 TSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDL----------------FEAILNDE--VV 214 (320)
T ss_pred ccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH----------------HHHHhcCC--CC
Confidence 2345799999999999999999999999999999999999999976432111 11111111 12
Q ss_pred CChhHHHHHHHHHHHhcCCCCCCCCCH------HHHHHH
Q 005001 653 YPAKSLSRFADIIALCVQPEPEFRPPM------SEVVQA 685 (720)
Q Consensus 653 ~~~~~~~~l~~li~~cl~~dP~~RPs~------~ell~~ 685 (720)
.+...+.++.+++.+||+.||++||++ ++++++
T Consensus 215 ~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 215 YPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred CCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence 344456778999999999999999998 556554
No 124
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=2e-37 Score=318.16 Aligned_cols=253 Identities=28% Similarity=0.493 Sum_probs=204.9
Q ss_pred cCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
++|++.+.||+|+||.||+|....+..+|+|.+..... ..+.+.+|++++++++|+|++++++++. .+..++||||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM---MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEF 81 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc---cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEc
Confidence 56888899999999999999888777899998865432 2456888999999999999999998875 4568999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
+.+++|.++++.. ....+++..+..++.|++.||+|||+. +++|+||||+||++++++.++|+|||++.......
T Consensus 82 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 82 MGKGSLLDFLKEG--DGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred CCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence 9999999999732 234589999999999999999999999 99999999999999999999999999997654332
Q ss_pred ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccc
Q 005001 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPA 648 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (720)
........++..|+|||...+..++.++||||||+++|||++ |+.||........ ...+ ...
T Consensus 157 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~----------------~~~~-~~~ 219 (260)
T cd05069 157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREV----------------LEQV-ERG 219 (260)
T ss_pred ccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH----------------HHHH-HcC
Confidence 222223346778999999999999999999999999999999 8999975432111 0111 111
Q ss_pred cCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 005001 649 LNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVR 688 (720)
Q Consensus 649 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~ 688 (720)
.....+...+..+.+++.+||..||++||+++++++.|++
T Consensus 220 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 220 YRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 1122344566789999999999999999999999999865
No 125
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=3.4e-38 Score=341.90 Aligned_cols=252 Identities=23% Similarity=0.303 Sum_probs=200.5
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
++|...+.||+|+||.||+|... +++.||+|++..... .......+.+|+++++.++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 46888999999999999999664 689999999865432 2334567888999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~gg~L~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~ 153 (377)
T cd05629 81 EFLPGGDLMTMLIK----YDTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHK 153 (377)
T ss_pred eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccccccccc
Confidence 99999999999862 46788999999999999999999999 999999999999999999999999999863321
Q ss_pred CCcc----------------------------------------------ccccccccccccCccccccCCCcccchhhh
Q 005001 568 TERQ----------------------------------------------VSTQMVGAFGYSAPEFALSGIYTVKSDVYS 601 (720)
Q Consensus 568 ~~~~----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS 601 (720)
.... .....+||+.|+|||++.+..++.++||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS 233 (377)
T cd05629 154 QHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWS 233 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEe
Confidence 1000 001246999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc--cccCCCCChhHHHHHHHHHHHhcCCCCCCC---
Q 005001 602 FGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD--PALNGMYPAKSLSRFADIIALCVQPEPEFR--- 676 (720)
Q Consensus 602 lGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~R--- 676 (720)
|||++|||++|..||......... .++.. ...........+.++.+++.+|+. +|.+|
T Consensus 234 lGvil~elltG~~Pf~~~~~~~~~----------------~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r 296 (377)
T cd05629 234 LGAIMFECLIGWPPFCSENSHETY----------------RKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGR 296 (377)
T ss_pred cchhhhhhhcCCCCCCCCCHHHHH----------------HHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCC
Confidence 999999999999999764432111 11111 011111112345678899999998 67665
Q ss_pred CCHHHHHHH
Q 005001 677 PPMSEVVQA 685 (720)
Q Consensus 677 Ps~~ell~~ 685 (720)
+++.|++++
T Consensus 297 ~~~~~~l~h 305 (377)
T cd05629 297 GGAHEIKSH 305 (377)
T ss_pred CCHHHHhcC
Confidence 599999876
No 126
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.5e-37 Score=326.45 Aligned_cols=262 Identities=25% Similarity=0.420 Sum_probs=207.9
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCc--EEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGK--IMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 485 (720)
++|+..+.||+|+||.||+|.+. ++. .+++|.++.. ........+.+|+.++.++ +||||+++++++...+..++
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc-CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 56888899999999999999764 444 4577776532 2344566788999999999 89999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCc
Q 005001 486 VYEYVGNGNLHDMLHFADD------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN 553 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~ 553 (720)
||||+++++|.++++.... ....+++.++..++.|++.||+|||+. +|+||||||+|||++.++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCc
Confidence 9999999999999974321 123688999999999999999999999 9999999999999999999
Q ss_pred eEEcccCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhc
Q 005001 554 PHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWAT 632 (720)
Q Consensus 554 ~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~ 632 (720)
+||+|||++....... ......++..|+|||.+.+..++.++|||||||++|||+| |..||........
T Consensus 163 ~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-------- 232 (303)
T cd05088 163 AKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL-------- 232 (303)
T ss_pred EEeCccccCcccchhh--hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHH--------
Confidence 9999999986432111 1111234668999999988889999999999999999998 9999965432111
Q ss_pred cccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhc
Q 005001 633 PQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRAS 694 (720)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 694 (720)
.+..........+...+..+.+++.+||+.+|++||++.++++.|+++.+...
T Consensus 233 ---------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~ 285 (303)
T cd05088 233 ---------YEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 285 (303)
T ss_pred ---------HHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence 01111111112233456678999999999999999999999999999877664
No 127
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.5e-38 Score=336.51 Aligned_cols=240 Identities=25% Similarity=0.368 Sum_probs=198.0
Q ss_pred ceeccCCCcEEEEEEE----cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecC
Q 005001 416 FLIGEGSLGRVYRAEF----ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVG 491 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 491 (720)
+.||+|+||.||+++. .+|+.||+|++............+.+|++++++++||||+++++++...+..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999965 357899999997654444445667789999999999999999999999999999999999
Q ss_pred CCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCcc
Q 005001 492 NGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571 (720)
Q Consensus 492 ~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 571 (720)
+|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....... .
T Consensus 82 ~~~L~~~l~----~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-~ 153 (318)
T cd05582 82 GGDLFTRLS----KEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-K 153 (318)
T ss_pred CCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC-C
Confidence 999999886 245789999999999999999999999 99999999999999999999999999987653322 1
Q ss_pred ccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCC
Q 005001 572 VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNG 651 (720)
Q Consensus 572 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (720)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ....+.... .
T Consensus 154 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~----------------~~~~i~~~~--~ 215 (318)
T cd05582 154 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKE----------------TMTMILKAK--L 215 (318)
T ss_pred ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHH----------------HHHHHHcCC--C
Confidence 2234579999999999999889999999999999999999999997543211 111111111 1
Q ss_pred CCChhHHHHHHHHHHHhcCCCCCCCCCHHH
Q 005001 652 MYPAKSLSRFADIIALCVQPEPEFRPPMSE 681 (720)
Q Consensus 652 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 681 (720)
..+...+..+.+++++||+.||++||++.+
T Consensus 216 ~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 216 GMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 234456677899999999999999999544
No 128
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.2e-37 Score=319.86 Aligned_cols=256 Identities=29% Similarity=0.476 Sum_probs=210.2
Q ss_pred HhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
..++|.+.+.||+|+||.||+|..++++.||+|.+..... ..+.+.+|+.++++++|+||+++++++......++||
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM---SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT 80 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc---CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEE
Confidence 4567889999999999999999988888999999875433 3456889999999999999999999999889999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++++|.+++... ....+++.++..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~i~~~--~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~ 155 (261)
T cd05034 81 EYMSKGSLLDFLKSG--EGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIED 155 (261)
T ss_pred eccCCCCHHHHHhcc--ccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccc
Confidence 999999999999732 235789999999999999999999999 999999999999999999999999999876653
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
..........++..|+|||.+.+..++.++||||+|+++|||++ |+.||........ ..++ .
T Consensus 156 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~----------------~~~~-~ 218 (261)
T cd05034 156 DEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREV----------------LEQV-E 218 (261)
T ss_pred hhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH----------------HHHH-H
Confidence 22222223345678999999999999999999999999999999 9999965432111 1111 1
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVR 688 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~ 688 (720)
.......+...+..+.+++.+||+.+|++||+++++.+.|+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 219 RGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 111222334456789999999999999999999999998864
No 129
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.4e-37 Score=321.03 Aligned_cols=257 Identities=25% Similarity=0.394 Sum_probs=203.6
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCc----EEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGK----IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (720)
++|+..+.||+|+||+||+|.+. +++ .+++|.+.... ......++..|+..+++++||||+++++++. ....+
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~ 84 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS-GRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQ 84 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccccc-chHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccE
Confidence 46778889999999999999764 344 47788875332 2334466778888899999999999999875 45678
Q ss_pred EEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
+++||+++|+|.++++. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.
T Consensus 85 ~i~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~ 158 (279)
T cd05111 85 LVTQLSPLGSLLDHVRQ---HRDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADL 158 (279)
T ss_pred EEEEeCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCcccee
Confidence 99999999999999973 245789999999999999999999999 999999999999999999999999999976
Q ss_pred CCCCCcc-ccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 565 TPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 565 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
....... ......++..|+|||.+.++.++.++|||||||++|||++ |..||....+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~---------------- 222 (279)
T cd05111 159 LYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPD---------------- 222 (279)
T ss_pred ccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH----------------
Confidence 5433221 2233457788999999999999999999999999999998 999997644321111
Q ss_pred hhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHH
Q 005001 643 KMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQ 691 (720)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~ 691 (720)
.+........+..++..+.+++.+||..||++||++.|+++.|..+..
T Consensus 223 -~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 223 -LLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred -HHHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 111111112233345678899999999999999999999999988754
No 130
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.6e-37 Score=327.01 Aligned_cols=265 Identities=26% Similarity=0.435 Sum_probs=211.9
Q ss_pred hcCCCccceeccCCCcEEEEEEEc--------CCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEee
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA--------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAE 479 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 479 (720)
.++|.+.+.||+|+||.||+|... ++..+|+|.+.... .......+.+|+.+++.+ +||||+++++++..
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 95 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC-ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence 457889999999999999999753 23569999997543 334456788899999999 79999999999999
Q ss_pred cCeEEEEEEecCCCCHHHHhhhccC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEE
Q 005001 480 HGQRLLVYEYVGNGNLHDMLHFADD------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANIL 547 (720)
Q Consensus 480 ~~~~~lV~e~~~~gsL~~~l~~~~~------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIl 547 (720)
.+..++||||+++|+|.++++.... ....+++.++.+++.|++.||+|||+. +++||||||+||+
T Consensus 96 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nil 172 (307)
T cd05098 96 DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL 172 (307)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheE
Confidence 9999999999999999999975322 123588999999999999999999998 9999999999999
Q ss_pred eCCCCceEEcccCCCccCCCCCccc-cccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchh
Q 005001 548 LDDELNPHLSDCGLAALTPNTERQV-STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQ 625 (720)
Q Consensus 548 l~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~ 625 (720)
++.++.+||+|||.+.......... .....+++.|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 173 l~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~--- 249 (307)
T cd05098 173 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE--- 249 (307)
T ss_pred EcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHH---
Confidence 9999999999999987654322111 111234568999999999999999999999999999998 88888643211
Q ss_pred hHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhc
Q 005001 626 SLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRAS 694 (720)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 694 (720)
.+.+.+........+...+.++.+++.+||..+|++||++.++++.|.++....+
T Consensus 250 --------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~~ 304 (307)
T cd05098 250 --------------ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALTS 304 (307)
T ss_pred --------------HHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHhh
Confidence 1111111122223344566789999999999999999999999999999887654
No 131
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=6.8e-38 Score=330.95 Aligned_cols=243 Identities=21% Similarity=0.348 Sum_probs=194.2
Q ss_pred ceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhc-CCCCCccccceEEeecCeEEEEEEecCC
Q 005001 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSR-LRHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lV~e~~~~ 492 (720)
+.||+|+||.||+|... +++.||+|.++.... .......+..|..++.. .+||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999765 578899999875432 22233445556666654 4899999999999999999999999999
Q ss_pred CCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccc
Q 005001 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (720)
Q Consensus 493 gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 572 (720)
|+|.++++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....... ..
T Consensus 81 g~L~~~~~~----~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~ 152 (316)
T cd05592 81 GDLMFHIQS----SGRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GK 152 (316)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-Cc
Confidence 999998862 45789999999999999999999999 99999999999999999999999999987543222 22
Q ss_pred cccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCC
Q 005001 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGM 652 (720)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (720)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+.. ....
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~----------------~~~i~~--~~~~ 214 (316)
T cd05592 153 ASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDEL----------------FDSILN--DRPH 214 (316)
T ss_pred cccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHH----------------HHHHHc--CCCC
Confidence 3345799999999999999999999999999999999999999976432111 111111 1122
Q ss_pred CChhHHHHHHHHHHHhcCCCCCCCCCHH-HHHH
Q 005001 653 YPAKSLSRFADIIALCVQPEPEFRPPMS-EVVQ 684 (720)
Q Consensus 653 ~~~~~~~~l~~li~~cl~~dP~~RPs~~-ell~ 684 (720)
++...+.++.+++.+||+.||++||++. ++++
T Consensus 215 ~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 215 FPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 3445667788999999999999999875 5544
No 132
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.8e-37 Score=318.96 Aligned_cols=253 Identities=25% Similarity=0.348 Sum_probs=207.5
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccC---hHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS---LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
+.|...+.||+|++|.||+|... +++.||+|.+...... ......+.+|++++++++||||+++++++..++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 46888999999999999999764 6899999988644322 2234568889999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
|+||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||+|+||+++.++.++|+|||++...
T Consensus 82 v~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~ 154 (263)
T cd06625 82 FMEYMPGGSVKDQLKA----YGALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRL 154 (263)
T ss_pred EEEECCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceec
Confidence 9999999999999863 35688999999999999999999999 9999999999999999999999999998765
Q ss_pred CCCCcccc--ccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHh
Q 005001 566 PNTERQVS--TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAK 643 (720)
Q Consensus 566 ~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (720)
........ ....|+..|+|||.+.+..++.++||||||+++|||++|+.||....... ...+
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----------------~~~~ 218 (263)
T cd06625 155 QTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMA----------------AIFK 218 (263)
T ss_pred cccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHH----------------HHHH
Confidence 43221111 23467889999999999999999999999999999999999997543211 1111
Q ss_pred hcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 644 MVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 644 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
..........+...+..+.+++.+||..+|.+||++.+++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 219 IATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred HhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 112222233455667788999999999999999999999875
No 133
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.7e-37 Score=322.93 Aligned_cols=258 Identities=24% Similarity=0.449 Sum_probs=206.5
Q ss_pred cCCCccceeccCCCcEEEEEEE-----cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEF-----ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (720)
.+|+..+.||+|+||.||+|.. ..+..|++|.+.... .......+.+|+.+++.++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 83 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN-NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC 83 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence 4577788999999999999974 246789999997543 3344567889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhhccC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCC
Q 005001 485 LVYEYVGNGNLHDMLHFADD-------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE 551 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~-------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~ 551 (720)
+||||+++++|.+++..... ....+++.++..++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~ 160 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQ 160 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCC
Confidence 99999999999999853211 123578899999999999999999999 99999999999999999
Q ss_pred CceEEcccCCCccCCCCCc-cccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHH
Q 005001 552 LNPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVR 629 (720)
Q Consensus 552 ~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~ 629 (720)
+.+||+|||++........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||.......
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~------ 234 (283)
T cd05090 161 LHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQE------ 234 (283)
T ss_pred CcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH------
Confidence 9999999999976533221 12233456778999999998889999999999999999999 989986543211
Q ss_pred hhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 005001 630 WATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVR 688 (720)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~ 688 (720)
..+.+........+..++..+.+++.+||+.||++||++.+|+++|..
T Consensus 235 -----------~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 235 -----------VIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred -----------HHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 111111111112344566788999999999999999999999998853
No 134
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.8e-37 Score=322.75 Aligned_cols=268 Identities=25% Similarity=0.398 Sum_probs=208.3
Q ss_pred CCccceeccCCCcEEEEEEE-----cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec--CeEE
Q 005001 412 FSQEFLIGEGSLGRVYRAEF-----ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQRL 484 (720)
Q Consensus 412 y~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 484 (720)
|...+.||+|+||+||++.. .++..||+|.+.... .......+.+|++++++++||||+++++++... ...+
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC-GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQ 84 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEE
Confidence 37889999999999988643 357889999987543 233456788999999999999999999987653 4679
Q ss_pred EEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
+||||+++++|.+++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++..
T Consensus 85 lv~e~~~~~~l~~~~~-----~~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 156 (283)
T cd05080 85 LIMEYVPLGSLRDYLP-----KHKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKA 156 (283)
T ss_pred EEecCCCCCCHHHHHH-----HcCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccc
Confidence 9999999999999986 34689999999999999999999999 999999999999999999999999999876
Q ss_pred CCCCCccc--cccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 565 TPNTERQV--STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 565 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
........ .....++..|+|||.+.+..++.++||||||+++|||+||..||........ ......... .......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~-~~~~~~~~~-~~~~~~~ 234 (283)
T cd05080 157 VPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFE-EMIGPKQGQ-MTVVRLI 234 (283)
T ss_pred cCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhh-hhhcccccc-cchhhhh
Confidence 64322211 1223456679999999988999999999999999999999999865432211 111111101 1111222
Q ss_pred hhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHH
Q 005001 643 KMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLV 690 (720)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~ 690 (720)
...+.......+...+..+.+++.+||+.||++||+++++++.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 235 ELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 222223333345566788999999999999999999999999998763
No 135
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.1e-37 Score=325.75 Aligned_cols=265 Identities=26% Similarity=0.443 Sum_probs=212.1
Q ss_pred HHhcCCCccceeccCCCcEEEEEEEc--------CCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEE
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEFA--------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYC 477 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 477 (720)
....+|.+.+.||+|+||.||+|... ++..||+|.+.... .......+.+|+.+++.+ +||||+++++++
T Consensus 12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 90 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 90 (304)
T ss_pred ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc-chHHHHHHHHHHHHHHhhccCCCchheeEEE
Confidence 34567888899999999999999642 24579999886542 344557788999999999 899999999999
Q ss_pred eecCeEEEEEEecCCCCHHHHhhhccC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCC
Q 005001 478 AEHGQRLLVYEYVGNGNLHDMLHFADD------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSAN 545 (720)
Q Consensus 478 ~~~~~~~lV~e~~~~gsL~~~l~~~~~------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~N 545 (720)
...+..++||||+++|+|.+++..... ....+++.++..++.|++.||+|||+. +++||||||+|
T Consensus 91 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~N 167 (304)
T cd05101 91 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARN 167 (304)
T ss_pred ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeecccccce
Confidence 999999999999999999999975321 124578899999999999999999999 99999999999
Q ss_pred EEeCCCCceEEcccCCCccCCCCCccc-cccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcc
Q 005001 546 ILLDDELNPHLSDCGLAALTPNTERQV-STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRS 623 (720)
Q Consensus 546 Ill~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~ 623 (720)
|+++.++.+||+|||+++......... .....+++.|+|||++.+..++.++||||||+++|||++ |..||.......
T Consensus 168 ili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~ 247 (304)
T cd05101 168 VLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 247 (304)
T ss_pred EEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH
Confidence 999999999999999998664432221 222346778999999999999999999999999999998 788886532211
Q ss_pred hhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHh
Q 005001 624 EQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQR 692 (720)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~ 692 (720)
+.+.+........+..++..+.+++.+||+.+|++||++.|+++.|.++..-
T Consensus 248 -----------------~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 248 -----------------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred -----------------HHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 1111111112223445677899999999999999999999999999988764
No 136
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=8.9e-38 Score=325.31 Aligned_cols=254 Identities=25% Similarity=0.368 Sum_probs=205.4
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccC-hHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
.|+..+.||+|+||.||++... +++.||+|++...... ......+.+|+.+++.++||||+++++.+..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 3778889999999999999764 6889999998754332 2234567789999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+++|+|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+||++++++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05605 81 LMNGGDLKFHIYNM--GNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG 155 (285)
T ss_pred ccCCCcHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCC
Confidence 99999999888632 235689999999999999999999999 9999999999999999999999999998765432
Q ss_pred CccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccc
Q 005001 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPA 648 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (720)
. ......|++.|+|||++.+..++.++||||+||++|||++|+.||......... +.+...+. .
T Consensus 156 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~-------------~~~~~~~~-~ 219 (285)
T cd05605 156 E--TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKR-------------EEVERRVK-E 219 (285)
T ss_pred C--ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHH-------------HHHHHHhh-h
Confidence 2 123357899999999999999999999999999999999999999764332111 01111111 1
Q ss_pred cCCCCChhHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 005001 649 LNGMYPAKSLSRFADIIALCVQPEPEFRP-----PMSEVVQA 685 (720)
Q Consensus 649 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~ell~~ 685 (720)
....++...+..+.+++.+||+.||++|| ++.+++++
T Consensus 220 ~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 220 DQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred cccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 11223445667789999999999999999 78888765
No 137
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.1e-37 Score=317.06 Aligned_cols=252 Identities=25% Similarity=0.432 Sum_probs=209.4
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
+|...+.||+|+||.||+|... +++.|++|.+............+.+|+++++.++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 3677889999999999999765 689999999876555566677889999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
+++++|.++++.. ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~--~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 81 AENGDLHKLLKMQ--RGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred CCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence 9999999999742 246789999999999999999999998 99999999999999999999999999987654432
Q ss_pred ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccccc
Q 005001 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPAL 649 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (720)
. ......|++.|+|||++.+..++.++|+||||+++|||++|+.||....... ...+... ..
T Consensus 156 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----------------~~~~~~~-~~ 217 (256)
T cd08529 156 N-FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA----------------LILKIIR-GV 217 (256)
T ss_pred c-hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH----------------HHHHHHc-CC
Confidence 2 2233568899999999999999999999999999999999999997543211 1111111 11
Q ss_pred CCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 650 NGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 650 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
....+...+..+.+++.+||+.+|++||++.+++++
T Consensus 218 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 218 FPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred CCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 112233556789999999999999999999999864
No 138
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-40 Score=313.40 Aligned_cols=248 Identities=27% Similarity=0.449 Sum_probs=211.4
Q ss_pred CCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEec
Q 005001 412 FSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYV 490 (720)
Q Consensus 412 y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 490 (720)
|.++.+||+|+||.||+|.++ .|+.+|||++... .+.+++.+|+.++++++.|+||++||.+..+..+|+|||||
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYC 110 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYC 110 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhc
Confidence 666788999999999999665 6999999999643 34678899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCc
Q 005001 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER 570 (720)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 570 (720)
..|++.+.++. .+++++++++..+++..++||+|||.. .-||||||+.|||++.+|.+|++|||.+..+.+. -
T Consensus 111 GAGSiSDI~R~---R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT-M 183 (502)
T KOG0574|consen 111 GAGSISDIMRA---RRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT-M 183 (502)
T ss_pred CCCcHHHHHHH---hcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhh-H
Confidence 99999999973 468999999999999999999999999 8899999999999999999999999999765432 2
Q ss_pred cccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccC
Q 005001 571 QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALN 650 (720)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (720)
.......|||.|||||++..-.|+.++||||||++..||..|++||..-.+......+ | ..+...
T Consensus 184 AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMI----P-----------T~PPPT 248 (502)
T KOG0574|consen 184 AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMI----P-----------TKPPPT 248 (502)
T ss_pred HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEec----c-----------CCCCCC
Confidence 2345678999999999999999999999999999999999999999754332111000 0 112233
Q ss_pred CCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 651 GMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 651 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
...|+..+.++.+++++||-++|++|-|+.+++++
T Consensus 249 F~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 249 FKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred CCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 34577788899999999999999999999998876
No 139
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=6.9e-38 Score=332.33 Aligned_cols=249 Identities=21% Similarity=0.326 Sum_probs=200.6
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCC-CCccccceEEeecCeEEEEE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRH-PNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lV~ 487 (720)
+|+..+.||+|+||.||+|... +++.||+|++..... .......+..|..++..++| ++|+.+++++...+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4778899999999999999765 578899999875432 23345667888888888876 45888999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 81 E~~~~g~L~~~~~----~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05587 81 EYVNGGDLMYHIQ----QVGKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIF 153 (324)
T ss_pred cCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCC
Confidence 9999999999886 245689999999999999999999999 999999999999999999999999999864322
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
.. .......||+.|+|||++.+..++.++||||+||++|||+||+.||........ ...+...
T Consensus 154 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~----------------~~~i~~~ 216 (324)
T cd05587 154 GG-KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL----------------FQSIMEH 216 (324)
T ss_pred CC-CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH----------------HHHHHcC
Confidence 11 122345799999999999999999999999999999999999999975432111 1111111
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPPM-----SEVVQA 685 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~ell~~ 685 (720)
...++...+.++.+++.+||+.||.+|++. .+++++
T Consensus 217 --~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 217 --NVSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred --CCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 122344566788899999999999999986 566554
No 140
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-38 Score=321.36 Aligned_cols=250 Identities=25% Similarity=0.412 Sum_probs=217.3
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
..-|..++.||+|.|+.|-+|++- +|++||||++.+.....-....+.+|++.|+.++|||||++|++...+..+|+|+
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL 96 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL 96 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence 345788889999999999999664 7999999999988887777888999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEe-CCCCceEEcccCCCccCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL-DDELNPHLSDCGLAALTP 566 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll-~~~~~~kl~Dfg~a~~~~ 566 (720)
|.=++|+|+|+|-. ....+.+..+.+++.||+.|+.|+|+. .+|||||||+||.+ ..-|.+||+|||++-.+.
T Consensus 97 ELGD~GDl~DyImK---He~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~ 170 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMK---HEEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ 170 (864)
T ss_pred EecCCchHHHHHHh---hhccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCC
Confidence 99999999999963 356789999999999999999999999 89999999999976 556899999999987654
Q ss_pred CCCccccccccccccccCccccccCCCc-ccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSGIYT-VKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
+.. .-...+|+..|-|||++.+..|+ +++||||||||||-|++|+.||...+. .+.+-.++
T Consensus 171 PG~--kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAND----------------SETLTmIm 232 (864)
T KOG4717|consen 171 PGK--KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAND----------------SETLTMIM 232 (864)
T ss_pred Ccc--hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccc----------------hhhhhhhh
Confidence 432 23457899999999999999996 679999999999999999999986543 23444556
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQ 684 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~ 684 (720)
|.++. .|...+.+..+||..||..||.+|-+.+||..
T Consensus 233 DCKYt--vPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 233 DCKYT--VPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred ccccc--CchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 65543 57788999999999999999999999887764
No 141
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.2e-37 Score=325.06 Aligned_cols=260 Identities=26% Similarity=0.417 Sum_probs=209.1
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc------CCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEeec
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEH 480 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 480 (720)
..++|...+.||+|+||.||+|... .+..||+|+++... .....+.+.+|+.+++++ +||||+++++++...
T Consensus 33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 111 (302)
T cd05055 33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA-HSSEREALMSELKIMSHLGNHENIVNLLGACTIG 111 (302)
T ss_pred cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC-ChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC
Confidence 3457888999999999999999642 34579999887543 233456788999999999 799999999999999
Q ss_pred CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccC
Q 005001 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (720)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 560 (720)
+..++||||+.+|+|.++++.. ....+++.++..++.|++.||+|||+. +|+|+||||+||+++.++.++++|||
T Consensus 112 ~~~~lv~e~~~~~~L~~~i~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg 186 (302)
T cd05055 112 GPILVITEYCCYGDLLNFLRRK--RESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFG 186 (302)
T ss_pred CceEEEEEcCCCCcHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCc
Confidence 9999999999999999999732 123489999999999999999999999 99999999999999999999999999
Q ss_pred CCccCCCCCcc-ccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccH
Q 005001 561 LAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDI 638 (720)
Q Consensus 561 ~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 638 (720)
++......... ......++..|+|||.+.+..++.++||||+||++|||++ |..||.......
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~--------------- 251 (302)
T cd05055 187 LARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS--------------- 251 (302)
T ss_pred ccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH---------------
Confidence 98765433221 1222346788999999999999999999999999999998 999987543211
Q ss_pred HHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 005001 639 DALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRL 689 (720)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~ 689 (720)
...+..........+...+..+.+++.+||+.+|++||++.|+++.|.++
T Consensus 252 -~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 252 -KFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred -HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 11111111122222334567899999999999999999999999999875
No 142
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=7e-38 Score=337.75 Aligned_cols=259 Identities=21% Similarity=0.281 Sum_probs=205.9
Q ss_pred cHHHHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecC
Q 005001 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG 481 (720)
Q Consensus 404 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 481 (720)
.+....++|+..+.||+|+||.||+|.+. +++.||+|.+..... .......+.+|..+++.++||||+++++++...+
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 116 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence 34445678999999999999999999776 578899999864322 2233456778999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCC
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 561 (720)
..++||||+++|+|.++++ ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 117 ~~~lv~Ey~~gg~L~~~~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~ 188 (371)
T cd05622 117 YLYMVMEYMPGGDLVNLMS-----NYDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGT 188 (371)
T ss_pred EEEEEEcCCCCCcHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCc
Confidence 9999999999999999986 34578899999999999999999999 999999999999999999999999999
Q ss_pred CccCCCCCccccccccccccccCccccccCC----CcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcccccc
Q 005001 562 AALTPNTERQVSTQMVGAFGYSAPEFALSGI----YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHD 637 (720)
Q Consensus 562 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 637 (720)
+...............||+.|+|||++.+.. ++.++|||||||++|||++|+.||.......
T Consensus 189 a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~-------------- 254 (371)
T cd05622 189 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG-------------- 254 (371)
T ss_pred eeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHH--------------
Confidence 9866543333334567999999999997643 7899999999999999999999997643211
Q ss_pred HHHHHhhcccc--cCCCCChhHHHHHHHHHHHhcCCCCCC--CCCHHHHHHHH
Q 005001 638 IDALAKMVDPA--LNGMYPAKSLSRFADIIALCVQPEPEF--RPPMSEVVQAL 686 (720)
Q Consensus 638 ~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~ell~~L 686 (720)
...++.... .........+..+.+++.+|+..++.+ |+++.+++++.
T Consensus 255 --~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 255 --TYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred --HHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 111111111 111112345677889999999844443 78999999864
No 143
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=8.1e-38 Score=330.35 Aligned_cols=242 Identities=21% Similarity=0.319 Sum_probs=194.0
Q ss_pred ceeccCCCcEEEEEEEc-CCcEEEEEEccccccC-hHHHHHHHHHHHHhhc-CCCCCccccceEEeecCeEEEEEEecCC
Q 005001 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSR-LRHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lV~e~~~~ 492 (720)
+.||+|+||.||+|.+. +|+.||+|.++..... ......+..|..++.. .+||||+++++++...+..++||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 36999999999999775 5889999999754321 2234455667777765 4899999999999999999999999999
Q ss_pred CCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccc
Q 005001 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (720)
Q Consensus 493 gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 572 (720)
|+|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||+++..... ...
T Consensus 81 g~L~~~i~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~ 152 (316)
T cd05620 81 GDLMFHIQD----KGRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG-DNR 152 (316)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccC-CCc
Confidence 999998862 46789999999999999999999999 9999999999999999999999999998643221 122
Q ss_pred cccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCC
Q 005001 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGM 652 (720)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (720)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+... ...
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~----------------~~~~~~--~~~ 214 (316)
T cd05620 153 ASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELF----------------ESIRVD--TPH 214 (316)
T ss_pred eeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHH----------------HHHHhC--CCC
Confidence 33467999999999999999999999999999999999999999754321111 111111 112
Q ss_pred CChhHHHHHHHHHHHhcCCCCCCCCCHH-HHH
Q 005001 653 YPAKSLSRFADIIALCVQPEPEFRPPMS-EVV 683 (720)
Q Consensus 653 ~~~~~~~~l~~li~~cl~~dP~~RPs~~-ell 683 (720)
.+...+.++.+++.+||+.||++||++. +++
T Consensus 215 ~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 215 YPRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 3334566788999999999999999985 555
No 144
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=2e-37 Score=321.33 Aligned_cols=258 Identities=26% Similarity=0.390 Sum_probs=206.6
Q ss_pred hcCCCccceeccCCCcEEEEEEEcC------CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCe
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFAN------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (720)
.++|...+.||+|+||.||+|.+.+ +..|++|.+.... .......+.+|+.+++.++|+||+++++++.+.+.
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC-SEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 4678889999999999999997753 5678889886432 33445678899999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCC---ceEE
Q 005001 483 RLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL---NPHL 556 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~---~~kl 556 (720)
.++||||+++++|.++++.... ....+++..+.+++.||+.||+|||+. +++||||||+||+++.++ .+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEe
Confidence 9999999999999999975432 123589999999999999999999999 999999999999998754 5999
Q ss_pred cccCCCccCCCCCccc-cccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccc
Q 005001 557 SDCGLAALTPNTERQV-STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQ 634 (720)
Q Consensus 557 ~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 634 (720)
+|||+++......... .....++..|+|||++.+..++.++|||||||++|||++ |..||........
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~---------- 230 (277)
T cd05036 161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEV---------- 230 (277)
T ss_pred ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH----------
Confidence 9999998653322111 112234568999999999999999999999999999997 9999975433211
Q ss_pred cccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 005001 635 LHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALV 687 (720)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~ 687 (720)
.+.+........+...+..+.+++.+||+.+|++||++.+++++|.
T Consensus 231 -------~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 231 -------MEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred -------HHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 1111111222334556778999999999999999999999999885
No 145
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=6.4e-38 Score=344.96 Aligned_cols=265 Identities=23% Similarity=0.328 Sum_probs=199.7
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec-------
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH------- 480 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------- 480 (720)
..+|...+.||+|+||.||+|... +++.||||++.... ....+|+.+++.++||||+++++++...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~ 138 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEK 138 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeecccccCCC
Confidence 457999999999999999999764 68899999885422 2234789999999999999999886432
Q ss_pred -CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCC-ceEEcc
Q 005001 481 -GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL-NPHLSD 558 (720)
Q Consensus 481 -~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~-~~kl~D 558 (720)
...++||||+++ +|.+++.........+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|
T Consensus 139 ~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~D 214 (440)
T PTZ00036 139 NIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCD 214 (440)
T ss_pred ceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeec
Confidence 246799999975 78887765544567899999999999999999999999 999999999999999665 699999
Q ss_pred cCCCccCCCCCccccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHH-H-hhcccc
Q 005001 559 CGLAALTPNTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLV-R-WATPQL 635 (720)
Q Consensus 559 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~-~-~~~~~~ 635 (720)
||+++...... ......||+.|+|||++.+. .++.++|||||||++|||++|.+||.+.........+ . ...+..
T Consensus 215 FGla~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~ 292 (440)
T PTZ00036 215 FGSAKNLLAGQ--RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTE 292 (440)
T ss_pred cccchhccCCC--CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 99998654322 22345789999999998764 6899999999999999999999999865543222111 1 111111
Q ss_pred ccHHHH----Hh-----hcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 636 HDIDAL----AK-----MVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 636 ~~~~~~----~~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
...... .. .....+...+|...+.++.+|+.+||+.||.+||++.|++++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 293 DQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred HHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 100000 00 000111112334456788999999999999999999999966
No 146
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.4e-37 Score=322.33 Aligned_cols=258 Identities=25% Similarity=0.394 Sum_probs=208.5
Q ss_pred hcCCCccceeccCCCcEEEEEEEcC------CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCe
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFAN------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (720)
.++|...+.||+|+||.||+|.... +..||+|.+.... .......+.+|+.+++.++||||+++++++...+.
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 83 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP 83 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC
Confidence 4678889999999999999997642 4689999986443 33445678899999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHhhhccC------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEE
Q 005001 483 RLLVYEYVGNGNLHDMLHFADD------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHL 556 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl 556 (720)
.++||||+++|+|.+++..... ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||
T Consensus 84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl 160 (277)
T cd05032 84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEE
Confidence 9999999999999999974322 123478899999999999999999998 9999999999999999999999
Q ss_pred cccCCCccCCCCCcc-ccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccc
Q 005001 557 SDCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQ 634 (720)
Q Consensus 557 ~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 634 (720)
+|||+++........ ......++..|+|||.+.+..++.++|||||||++||+++ |..||.........
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~--------- 231 (277)
T cd05032 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVL--------- 231 (277)
T ss_pred CCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHH---------
Confidence 999998765433221 1223456789999999998889999999999999999998 99998654322111
Q ss_pred cccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 005001 635 LHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALV 687 (720)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~ 687 (720)
+..........+...+..+.+++.+||+.+|++|||+.++++.|+
T Consensus 232 --------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 232 --------KFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred --------HHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 111111122334556788999999999999999999999998875
No 147
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1e-37 Score=331.42 Aligned_cols=252 Identities=23% Similarity=0.351 Sum_probs=198.1
Q ss_pred ceeccCCCcEEEEEEEc-CCcEEEEEEccccccC-hHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEEEEEecCC
Q 005001 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 492 (720)
+.||+|+||.||+|... +++.||+|.+...... ......+.+|..++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 36999999999999765 5789999999765332 23445677888887766 899999999999999999999999999
Q ss_pred CCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccc
Q 005001 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (720)
Q Consensus 493 gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 572 (720)
|+|..++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... .
T Consensus 81 ~~L~~~~~----~~~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~-~ 152 (329)
T cd05618 81 GDLMFHMQ----RQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD-T 152 (329)
T ss_pred CCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC-c
Confidence 99998886 246789999999999999999999999 999999999999999999999999999875332221 2
Q ss_pred cccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHH-HhhcccccCC
Q 005001 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDAL-AKMVDPALNG 651 (720)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 651 (720)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......... .......+ ..+... ..
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~--------~~~~~~~~~~~i~~~--~~ 222 (329)
T cd05618 153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP--------DQNTEDYLFQVILEK--QI 222 (329)
T ss_pred cccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCc--------ccccHHHHHHHHhcC--CC
Confidence 23457999999999999999999999999999999999999999642211100 00000111 111111 12
Q ss_pred CCChhHHHHHHHHHHHhcCCCCCCCCCH------HHHHHH
Q 005001 652 MYPAKSLSRFADIIALCVQPEPEFRPPM------SEVVQA 685 (720)
Q Consensus 652 ~~~~~~~~~l~~li~~cl~~dP~~RPs~------~ell~~ 685 (720)
..|...+..+.+++.+||+.||++||++ .+++++
T Consensus 223 ~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 223 RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred CCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 3455566788999999999999999984 566655
No 148
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=6.4e-38 Score=332.09 Aligned_cols=244 Identities=23% Similarity=0.353 Sum_probs=198.1
Q ss_pred ceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEEEEEecCC
Q 005001 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 492 (720)
++||+|+||.||+|... +++.||+|.+..... .......+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 36999999999999775 578999999875432 233445677788888765 899999999999999999999999999
Q ss_pred CCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccc
Q 005001 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (720)
Q Consensus 493 gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 572 (720)
|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....... ..
T Consensus 81 ~~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~-~~ 152 (321)
T cd05591 81 GDLMFQIQ----RSRKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG-VT 152 (321)
T ss_pred CcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCC-cc
Confidence 99999886 245789999999999999999999999 99999999999999999999999999987543222 12
Q ss_pred cccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCC
Q 005001 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGM 652 (720)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (720)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+.... ..
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~----------------~~~i~~~~--~~ 214 (321)
T cd05591 153 TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDL----------------FESILHDD--VL 214 (321)
T ss_pred ccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHH----------------HHHHHcCC--CC
Confidence 2345799999999999999999999999999999999999999976442211 11111111 12
Q ss_pred CChhHHHHHHHHHHHhcCCCCCCCC-------CHHHHHHH
Q 005001 653 YPAKSLSRFADIIALCVQPEPEFRP-------PMSEVVQA 685 (720)
Q Consensus 653 ~~~~~~~~l~~li~~cl~~dP~~RP-------s~~ell~~ 685 (720)
++...+.++.+++.+||+.||++|| ++++++++
T Consensus 215 ~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 215 YPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 3344567788999999999999999 77888765
No 149
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=6.4e-38 Score=340.36 Aligned_cols=251 Identities=24% Similarity=0.301 Sum_probs=199.4
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
+|+..+.||+|+||.||+|... +++.||+|++..... .......+.+|+.++++++||||+++++.+.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5888999999999999999764 688999999875432 23345678889999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+++|+|.+++.. .+.+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 82 ~~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~ 154 (382)
T cd05625 82 YIPGGDMMSLLIR----MGIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (382)
T ss_pred CCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCcccccc
Confidence 9999999999863 35688999999999999999999999 9999999999999999999999999997532100
Q ss_pred C----------------------------------------------ccccccccccccccCccccccCCCcccchhhhH
Q 005001 569 E----------------------------------------------RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSF 602 (720)
Q Consensus 569 ~----------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSl 602 (720)
. .......+||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (382)
T cd05625 155 HDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV 234 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEec
Confidence 0 000123469999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc--cccCCCCChhHHHHHHHHHHHhcCCCCCCCCC--
Q 005001 603 GVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD--PALNGMYPAKSLSRFADIIALCVQPEPEFRPP-- 678 (720)
Q Consensus 603 Gv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-- 678 (720)
||++|||++|+.||....+..... ++.. ...........+.++.+++.+|+ .+|++|++
T Consensus 235 Gvil~elltG~~Pf~~~~~~~~~~----------------~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~ 297 (382)
T cd05625 235 GVILYEMLVGQPPFLAQTPLETQM----------------KVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKN 297 (382)
T ss_pred hHHHHHHHhCCCCCCCCCHHHHHH----------------HHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCC
Confidence 999999999999998654321111 1111 11111112234566778888876 59999987
Q ss_pred -HHHHHHH
Q 005001 679 -MSEVVQA 685 (720)
Q Consensus 679 -~~ell~~ 685 (720)
+.+++++
T Consensus 298 ~~~ei~~h 305 (382)
T cd05625 298 GADEIKAH 305 (382)
T ss_pred CHHHHhcC
Confidence 8888765
No 150
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=3.5e-37 Score=317.85 Aligned_cols=257 Identities=25% Similarity=0.439 Sum_probs=207.4
Q ss_pred hcCCCccceeccCCCcEEEEEEEcC-C---cEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFAN-G---KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~-~---~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (720)
.++|+..+.||+|+||.||+|.... + ..+++|++.... .....+.+..|++++++++||||+++.+++...+..+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY-TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAM 82 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcE
Confidence 3467788899999999999997752 3 378999886543 3344567889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
+||||+++++|.++++. ....+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 83 lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~ 156 (268)
T cd05063 83 IITEYMENGALDKYLRD---HDGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRV 156 (268)
T ss_pred EEEEcCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCcccee
Confidence 99999999999999863 235789999999999999999999999 999999999999999999999999999876
Q ss_pred CCCCCcccc--ccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHH
Q 005001 565 TPNTERQVS--TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDAL 641 (720)
Q Consensus 565 ~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (720)
......... .....+..|+|||++.+..++.++|||||||++|||++ |+.||....... .
T Consensus 157 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~-----------------~ 219 (268)
T cd05063 157 LEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE-----------------V 219 (268)
T ss_pred cccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHH-----------------H
Confidence 543222111 11223457999999998899999999999999999998 999996543211 1
Q ss_pred HhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 005001 642 AKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRL 689 (720)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~ 689 (720)
.+.+........+...+..+.+++.+||+.+|++||++.++++.|+++
T Consensus 220 ~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 220 MKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred HHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 111111122223345667889999999999999999999999999876
No 151
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.1e-37 Score=329.19 Aligned_cols=243 Identities=24% Similarity=0.363 Sum_probs=194.2
Q ss_pred ceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhc-CCCCCccccceEEeecCeEEEEEEecCC
Q 005001 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSR-LRHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lV~e~~~~ 492 (720)
+.||+|+||.||+|.+. +++.||+|.++.... .......+..|..++.. ++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999875 578999999975432 12233455667777765 4999999999999999999999999999
Q ss_pred CCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccc
Q 005001 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (720)
Q Consensus 493 gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 572 (720)
|+|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....... ..
T Consensus 81 g~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 152 (316)
T cd05619 81 GDLMFHIQS----CHKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD-AK 152 (316)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC-Cc
Confidence 999999862 35788999999999999999999999 99999999999999999999999999987532211 12
Q ss_pred cccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCC
Q 005001 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGM 652 (720)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (720)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...........+ ... ...
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i----------------~~~--~~~ 214 (316)
T cd05619 153 TCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSI----------------RMD--NPC 214 (316)
T ss_pred eeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHH----------------HhC--CCC
Confidence 23457999999999999999999999999999999999999999764321111100 000 112
Q ss_pred CChhHHHHHHHHHHHhcCCCCCCCCCHH-HHHH
Q 005001 653 YPAKSLSRFADIIALCVQPEPEFRPPMS-EVVQ 684 (720)
Q Consensus 653 ~~~~~~~~l~~li~~cl~~dP~~RPs~~-ell~ 684 (720)
++...+.++.+++.+||+.||++||++. ++++
T Consensus 215 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 215 YPRWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred CCccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 3334556788999999999999999997 5654
No 152
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2.8e-37 Score=322.11 Aligned_cols=263 Identities=25% Similarity=0.391 Sum_probs=208.1
Q ss_pred HHhcCCCccceeccCCCcEEEEEEEc------CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH 480 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 480 (720)
...++|++.+.||+|+||.||+|... .+..||+|.+.... .......+.+|+..++.++||||+++++++...
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 81 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 34578999999999999999999653 24579999886443 233455688899999999999999999999999
Q ss_pred CeEEEEEEecCCCCHHHHhhhccCC------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCce
Q 005001 481 GQRLLVYEYVGNGNLHDMLHFADDS------SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNP 554 (720)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~l~~~~~~------~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~ 554 (720)
+..++||||+++|+|.++++..... ....++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~ 158 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTV 158 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcE
Confidence 9999999999999999999753211 23457788899999999999999999 99999999999999999999
Q ss_pred EEcccCCCccCCCCCccc-cccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhc
Q 005001 555 HLSDCGLAALTPNTERQV-STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWAT 632 (720)
Q Consensus 555 kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~ 632 (720)
+|+|||+++......... .....++..|+|||.+.+..++.++|||||||++|||++ |..||....... .
T Consensus 159 ~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~---~----- 230 (288)
T cd05061 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ---V----- 230 (288)
T ss_pred EECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH---H-----
Confidence 999999987554322211 122345678999999999999999999999999999999 788886533211 1
Q ss_pred cccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHH
Q 005001 633 PQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLV 690 (720)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~ 690 (720)
.....+. .....+...+..+.+++.+||+.||++||++.++++.|.+.+
T Consensus 231 --------~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 231 --------LKFVMDG-GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred --------HHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 1111111 111223445678999999999999999999999999987754
No 153
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=3.7e-37 Score=317.51 Aligned_cols=256 Identities=25% Similarity=0.406 Sum_probs=206.7
Q ss_pred cCCCccceeccCCCcEEEEEEEc----CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
.+|+..+.||+|+||.||+|.+. .+..+|+|.++... .......+.+|+.++++++||||+++++++...+..++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 82 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMI 82 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 46788899999999999999764 23479999986543 33445688999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
||||+++++|.+++.. ....+++.++..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++...
T Consensus 83 v~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd05066 83 VTEYMENGSLDAFLRK---HDGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVL 156 (267)
T ss_pred EEEcCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCccccc
Confidence 9999999999999973 235689999999999999999999999 9999999999999999999999999999766
Q ss_pred CCCCcccc--ccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 566 PNTERQVS--TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 566 ~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
........ ....++..|+|||.+.+..++.++||||||+++||+++ |..||......... .
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~----------------~ 220 (267)
T cd05066 157 EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVI----------------K 220 (267)
T ss_pred ccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHH----------------H
Confidence 44322211 11233568999999999899999999999999999887 99999754322111 0
Q ss_pred hhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 005001 643 KMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRL 689 (720)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~ 689 (720)
.+. .......+...+..+.+++.+||+.+|.+||++.++++.|.++
T Consensus 221 ~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 221 AIE-EGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred HHh-CCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 111 1111122334567889999999999999999999999999875
No 154
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.2e-37 Score=330.94 Aligned_cols=252 Identities=22% Similarity=0.338 Sum_probs=199.0
Q ss_pred ceeccCCCcEEEEEEEc-CCcEEEEEEccccccC-hHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEEEEEecCC
Q 005001 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 492 (720)
+.||+|+||.||+|.+. +++.||+|.++..... ......+.+|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 36999999999999765 6889999999765432 23345677888988888 799999999999999999999999999
Q ss_pred CCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccc
Q 005001 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (720)
Q Consensus 493 gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 572 (720)
|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....... ..
T Consensus 81 g~L~~~~~----~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~-~~ 152 (329)
T cd05588 81 GDLMFHMQ----RQRKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG-DT 152 (329)
T ss_pred CCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccCC-Cc
Confidence 99998886 246799999999999999999999999 99999999999999999999999999986432221 12
Q ss_pred cccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHH-HHhhcccccCC
Q 005001 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDA-LAKMVDPALNG 651 (720)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 651 (720)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......... ....... ...+.... .
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~--------~~~~~~~~~~~~~~~~--~ 222 (329)
T cd05588 153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNP--------DQNTEDYLFQVILEKQ--I 222 (329)
T ss_pred cccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccc--------cccchHHHHHHHHcCC--C
Confidence 23467999999999999999999999999999999999999999743221100 0000001 11111111 1
Q ss_pred CCChhHHHHHHHHHHHhcCCCCCCCCC------HHHHHHH
Q 005001 652 MYPAKSLSRFADIIALCVQPEPEFRPP------MSEVVQA 685 (720)
Q Consensus 652 ~~~~~~~~~l~~li~~cl~~dP~~RPs------~~ell~~ 685 (720)
..|...+..+.+++.+||+.||.+||+ +.+++++
T Consensus 223 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 223 RIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 234456677899999999999999997 5677654
No 155
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.1e-37 Score=322.21 Aligned_cols=257 Identities=23% Similarity=0.385 Sum_probs=205.6
Q ss_pred CCCccceeccCCCcEEEEEEEc------CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (720)
+|+..+.||+|+||.||+|... .++.||+|++.... .......+.+|+.++..++||||+++++++...+..+
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~ 84 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA-EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS 84 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence 4667788999999999999763 25789999997543 2334567889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhhcc------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCC
Q 005001 485 LVYEYVGNGNLHDMLHFAD------------DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL 552 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~------------~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~ 552 (720)
+++||+.+++|.+++.... .....+++..+..++.|++.||+|||+. +|+||||||+||++++++
T Consensus 85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKL 161 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCC
Confidence 9999999999999985311 1123578889999999999999999999 999999999999999999
Q ss_pred ceEEcccCCCccCCCCCcc-ccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHh
Q 005001 553 NPHLSDCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRW 630 (720)
Q Consensus 553 ~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~ 630 (720)
.+||+|||+++........ ......+++.|+|||.+.+..++.++|||||||++|||++ |..||.......
T Consensus 162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~------- 234 (283)
T cd05091 162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD------- 234 (283)
T ss_pred ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHH-------
Confidence 9999999998765432211 1122346789999999998899999999999999999998 888886543211
Q ss_pred hccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 005001 631 ATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVR 688 (720)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~ 688 (720)
....+... .....+..++..+.+++.+||+.+|++||++++|++.|+.
T Consensus 235 ---------~~~~i~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 235 ---------VIEMIRNR-QVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred ---------HHHHHHcC-CcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 11111111 1223455677889999999999999999999999999863
No 156
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-38 Score=309.99 Aligned_cols=269 Identities=25% Similarity=0.380 Sum_probs=228.0
Q ss_pred chhcHHHHhcCCCccceeccCCCcEEEEEEEc------CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccc
Q 005001 401 TVASLQTATNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLA 474 (720)
Q Consensus 401 ~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 474 (720)
...++.....+++...++.+|.||.||+|.+. +.+.|.+|.++... +.-+...++.|.-++....|||+.++.
T Consensus 275 r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A-S~iQv~~~L~es~lly~~sH~nll~V~ 353 (563)
T KOG1024|consen 275 RLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA-SQIQVNLLLQESMLLYGASHPNLLSVL 353 (563)
T ss_pred hHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc-cHHHHHHHHHHHHHHhcCcCCCcccee
Confidence 45567777788899999999999999999554 34567778887654 555677889999889999999999999
Q ss_pred eEEee-cCeEEEEEEecCCCCHHHHhhhccCC----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeC
Q 005001 475 GYCAE-HGQRLLVYEYVGNGNLHDMLHFADDS----SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD 549 (720)
Q Consensus 475 ~~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~~----~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~ 549 (720)
+.+.+ .+..++++.++..|+|..++..++.. .+.++..+...++.|++.|++|||++ +|||.||.++|++|+
T Consensus 354 ~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvId 430 (563)
T KOG1024|consen 354 GVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVID 430 (563)
T ss_pred EEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceeh
Confidence 98755 45779999999999999999865432 24578888999999999999999999 999999999999999
Q ss_pred CCCceEEcccCCCccCCCCC-ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhH
Q 005001 550 DELNPHLSDCGLAALTPNTE-RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSL 627 (720)
Q Consensus 550 ~~~~~kl~Dfg~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~ 627 (720)
+..++||+|=.+++.+-+.+ .........+..||+||.+....|+.++|||||||++|||+| |+.||..-+|
T Consensus 431 d~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDP------ 504 (563)
T KOG1024|consen 431 DQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDP------ 504 (563)
T ss_pred hheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCH------
Confidence 99999999999998654433 333445566789999999999999999999999999999999 9999975433
Q ss_pred HHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHH
Q 005001 628 VRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLV 690 (720)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~ 690 (720)
..+..++..+.+...|.+|+++++.+|..||..+|++||+++++...|.++-
T Consensus 505 -----------fEm~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~ 556 (563)
T KOG1024|consen 505 -----------FEMEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFH 556 (563)
T ss_pred -----------HHHHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 4566677778888889999999999999999999999999999999998863
No 157
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.1e-37 Score=330.71 Aligned_cols=249 Identities=21% Similarity=0.320 Sum_probs=199.9
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEEEE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 487 (720)
+|...+.||+|+||.||+|... +++.||+|.+..... .......+..|..++..+ +|++|+++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4778889999999999999775 578999999875432 222334566677777766 6899999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++|+|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~ 153 (323)
T cd05616 81 EYVNGGDLMYQIQQ----VGRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMW 153 (323)
T ss_pred cCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCC
Confidence 99999999998862 45689999999999999999999999 999999999999999999999999999875332
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+...
T Consensus 154 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~----------------~~~i~~~ 216 (323)
T cd05616 154 DG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL----------------FQSIMEH 216 (323)
T ss_pred CC-CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHH----------------HHHHHhC
Confidence 21 122345799999999999999999999999999999999999999976432111 1111111
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPPM-----SEVVQA 685 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~ell~~ 685 (720)
...+|...+.++.+++.+||+.||++|++. .+++++
T Consensus 217 --~~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 217 --NVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred --CCCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 122345566788999999999999999985 566543
No 158
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=4.8e-37 Score=314.79 Aligned_cols=248 Identities=22% Similarity=0.355 Sum_probs=199.8
Q ss_pred eeccCCCcEEEEEEEc---CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecCCC
Q 005001 417 LIGEGSLGRVYRAEFA---NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNG 493 (720)
Q Consensus 417 ~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 493 (720)
.||+|+||.||+|.+. .+..||+|.+.... .....+.+.+|+.++++++||||+++++++. .+..++||||++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~ 79 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN-EKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGG 79 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc-ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCC
Confidence 3899999999999764 35579999886543 3344567899999999999999999999875 45789999999999
Q ss_pred CHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCcccc
Q 005001 494 NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVS 573 (720)
Q Consensus 494 sL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 573 (720)
+|.+++.. ....+++..+.+++.|++.||+|||+. +++||||||+||+++.++.+||+|||++...........
T Consensus 80 ~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 153 (257)
T cd05115 80 PLNKFLSG---KKDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYK 153 (257)
T ss_pred CHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCcccee
Confidence 99999862 245789999999999999999999999 999999999999999999999999999876543322211
Q ss_pred --ccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccC
Q 005001 574 --TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALN 650 (720)
Q Consensus 574 --~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (720)
....++..|+|||.+.+..++.++|||||||++|||++ |..||........ ...+.....
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-----------------~~~~~~~~~ 216 (257)
T cd05115 154 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEV-----------------MSFIEQGKR 216 (257)
T ss_pred ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHH-----------------HHHHHCCCC
Confidence 11234578999999998889999999999999999996 9999975432211 111112222
Q ss_pred CCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 005001 651 GMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRL 689 (720)
Q Consensus 651 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~ 689 (720)
...+..++.++.+++.+||..||++||++.+|.+.|+.+
T Consensus 217 ~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 217 LDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 334556678899999999999999999999999998764
No 159
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.3e-37 Score=329.17 Aligned_cols=244 Identities=22% Similarity=0.342 Sum_probs=198.0
Q ss_pred ceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEEEEEecCC
Q 005001 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 492 (720)
+.||+|+||.||+|.+. +++.||+|.++.... .......+.+|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999775 578999999975432 223445667888888777 799999999999999999999999999
Q ss_pred CCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccc
Q 005001 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (720)
Q Consensus 493 gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 572 (720)
|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 ~~L~~~~~~----~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~ 152 (318)
T cd05570 81 GDLMFHIQR----SGRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG-VT 152 (318)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCC-Cc
Confidence 999998862 45789999999999999999999999 99999999999999999999999999986432221 12
Q ss_pred cccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCC
Q 005001 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGM 652 (720)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (720)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+... ...
T Consensus 153 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~----------------~~~i~~~--~~~ 214 (318)
T cd05570 153 TSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDEL----------------FQSILED--EVR 214 (318)
T ss_pred ccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHH----------------HHHHHcC--CCC
Confidence 2335699999999999999999999999999999999999999975432111 1111111 112
Q ss_pred CChhHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHH
Q 005001 653 YPAKSLSRFADIIALCVQPEPEFRPPM-----SEVVQA 685 (720)
Q Consensus 653 ~~~~~~~~l~~li~~cl~~dP~~RPs~-----~ell~~ 685 (720)
++...+..+.+++++||+.||++||++ .+++++
T Consensus 215 ~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 215 YPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred CCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 344566788999999999999999999 777754
No 160
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=4.5e-38 Score=340.94 Aligned_cols=254 Identities=23% Similarity=0.283 Sum_probs=201.3
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
+.|++.+.||+|+||.||+|+.. +++.||+|.+..... .......+.+|+++++.++||||+++++.+.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 36888999999999999999765 588999999865432 2223466788999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++|+|.+++.. .+.+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++..+..
T Consensus 81 E~~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~ 153 (376)
T cd05598 81 DYIPGGDMMSLLIR----LGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 153 (376)
T ss_pred eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCccccc
Confidence 99999999999963 45688999999999999999999999 999999999999999999999999999743210
Q ss_pred C------------------------------------------CccccccccccccccCccccccCCCcccchhhhHHHH
Q 005001 568 T------------------------------------------ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVV 605 (720)
Q Consensus 568 ~------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~ 605 (720)
. .........||+.|+|||++.+..++.++|||||||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 233 (376)
T cd05598 154 THDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 233 (376)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccce
Confidence 0 0000123579999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCC---CHHHH
Q 005001 606 MLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRP---PMSEV 682 (720)
Q Consensus 606 l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP---s~~el 682 (720)
+|||++|+.||....+......+. . .............+..+.+++.+|+ .+|.+|+ ++.++
T Consensus 234 lyell~G~~Pf~~~~~~~~~~~i~-------------~-~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~el 298 (376)
T cd05598 234 LYEMLVGQPPFLADTPAETQLKVI-------------N-WETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEI 298 (376)
T ss_pred eeehhhCCCCCCCCCHHHHHHHHh-------------c-cCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHH
Confidence 999999999998654322111110 0 0001111112234566778898876 5999999 89999
Q ss_pred HHH
Q 005001 683 VQA 685 (720)
Q Consensus 683 l~~ 685 (720)
+++
T Consensus 299 l~h 301 (376)
T cd05598 299 KAH 301 (376)
T ss_pred hCC
Confidence 877
No 161
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.4e-37 Score=324.08 Aligned_cols=265 Identities=25% Similarity=0.431 Sum_probs=210.7
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc--------CCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEe
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA--------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCA 478 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 478 (720)
...+|.+.+.||+|+||.||+|... ....+|+|.+.... .......+.+|+.+++++ +||||+++++++.
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA-TDKDLADLISEMELMKLIGKHKNIINLLGVCT 88 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEc
Confidence 3457888899999999999999642 24578999887543 344566788999999999 6999999999999
Q ss_pred ecCeEEEEEEecCCCCHHHHhhhccC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCE
Q 005001 479 EHGQRLLVYEYVGNGNLHDMLHFADD------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANI 546 (720)
Q Consensus 479 ~~~~~~lV~e~~~~gsL~~~l~~~~~------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NI 546 (720)
..+..++||||+++|+|.+++..... ....+++.++.+++.|++.||.|||+. +++||||||+||
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Ni 165 (314)
T cd05099 89 QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNV 165 (314)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeE
Confidence 99999999999999999999975321 224589999999999999999999998 999999999999
Q ss_pred EeCCCCceEEcccCCCccCCCCCccc-cccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcch
Q 005001 547 LLDDELNPHLSDCGLAALTPNTERQV-STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSE 624 (720)
Q Consensus 547 ll~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~ 624 (720)
+++.++.+||+|||+++......... .....++..|+|||.+.+..++.++|||||||++|||++ |..||........
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~ 245 (314)
T cd05099 166 LVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEEL 245 (314)
T ss_pred EEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 99999999999999997654322111 111234567999999999999999999999999999999 8899865432111
Q ss_pred hhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 625 QSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
.. ..........+..++.++.+++.+||..||++||++.++++.|.++....
T Consensus 246 ~~-----------------~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 297 (314)
T cd05099 246 FK-----------------LLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV 297 (314)
T ss_pred HH-----------------HHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence 11 11111111234456678889999999999999999999999999986654
No 162
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-38 Score=301.81 Aligned_cols=252 Identities=28% Similarity=0.405 Sum_probs=204.8
Q ss_pred hcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccCh------HHHHHHHHHHHHhhcC-CCCCccccceEEeec
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSL------QEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEH 480 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~------~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 480 (720)
-+.|...+.||.|..++|.++.+ ++|+.+|+|++....... .-.+.-.+|+.+++++ .||+|+.+.++++.+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 35577788999999999999855 468899999985433211 1123345789999987 899999999999999
Q ss_pred CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccC
Q 005001 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (720)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 560 (720)
...++|+|.|+.|.|+|++. ..-.+++.+.++|++|+.+|++|||.. +||||||||+|||++++.++||+|||
T Consensus 96 sF~FlVFdl~prGELFDyLt----s~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDFG 168 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLT----SKVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDFG 168 (411)
T ss_pred chhhhhhhhcccchHHHHhh----hheeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEeccc
Confidence 99999999999999999997 456799999999999999999999999 99999999999999999999999999
Q ss_pred CCccCCCCCccccccccccccccCcccccc------CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccc
Q 005001 561 LAALTPNTERQVSTQMVGAFGYSAPEFALS------GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQ 634 (720)
Q Consensus 561 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 634 (720)
+++....... -...+|||+|+|||.+.- ..|+..+|+|++||++|-|+.|.+||.....
T Consensus 169 Fa~~l~~Gek--LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQ------------- 233 (411)
T KOG0599|consen 169 FACQLEPGEK--LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQ------------- 233 (411)
T ss_pred eeeccCCchh--HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHH-------------
Confidence 9988765432 345799999999999853 4588899999999999999999999964221
Q ss_pred cccHHHHHhhcccccCCCCC--hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 635 LHDIDALAKMVDPALNGMYP--AKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+--++.++...+....| .+.+....+||.+||+.||++|.|++|++++
T Consensus 234 ---mlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 234 ---MLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred ---HHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 11222233333332222 2455678899999999999999999999976
No 163
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=5e-37 Score=315.20 Aligned_cols=255 Identities=24% Similarity=0.405 Sum_probs=207.1
Q ss_pred HhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
...+|+..+.||+|+||.||+|...++..+++|.+... ......+.+|++++++++|+||+++++++.. ...+++|
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~ 79 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG---SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 79 (260)
T ss_pred cccceeEEeEecCccceEEEEEEecCCccEEEEecCCC---hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEE
Confidence 34678899999999999999998888888999988643 2345678899999999999999999999877 7789999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++++|.+++... ....+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+.....
T Consensus 80 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 154 (260)
T cd05073 80 EFMAKGSLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIED 154 (260)
T ss_pred EeCCCCcHHHHHHhC--CccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccC
Confidence 999999999999742 245678899999999999999999998 999999999999999999999999999876543
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
..........++..|+|||++.+..++.++|+|||||++|++++ |+.||.......... ...
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~-----------------~~~ 217 (260)
T cd05073 155 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIR-----------------ALE 217 (260)
T ss_pred CCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHH-----------------HHh
Confidence 32222223346678999999999889999999999999999999 999997543211111 011
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVR 688 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~ 688 (720)
.......+...+.++.+++.+||+.+|++||++.++.+.|+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 218 RGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred CCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 111112233456678999999999999999999999998864
No 164
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=6.8e-37 Score=318.55 Aligned_cols=271 Identities=24% Similarity=0.362 Sum_probs=206.3
Q ss_pred cCCCccceeccCCCcEEEEEEE-----cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEee--cCe
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEF-----ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE--HGQ 482 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~ 482 (720)
++|+..+.||+|+||.||+|.. .++..||+|++... .......+.+|++++++++||||+++++++.. ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS--TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 81 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCc
Confidence 4678889999999999999964 25789999998654 23445678899999999999999999998654 346
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCC
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a 562 (720)
.++|+||+++++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 82 ~~lv~e~~~~~~L~~~l~~---~~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~ 155 (284)
T cd05081 82 LRLVMEYLPYGSLRDYLQK---HRERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLT 155 (284)
T ss_pred eEEEEEecCCCCHHHHHHh---cCcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCccc
Confidence 8999999999999999863 234689999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCcccc--ccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHH
Q 005001 563 ALTPNTERQVS--TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDA 640 (720)
Q Consensus 563 ~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 640 (720)
........... ....++..|+|||++.+..++.++|||||||++|||++|..|+....... ................
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 234 (284)
T cd05081 156 KVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEF-MRMMGNDKQGQMIVYH 234 (284)
T ss_pred ccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhh-hhhcccccccccchHH
Confidence 87654322111 11234456999999999899999999999999999999887764322110 0000000000011112
Q ss_pred HHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 005001 641 LAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRL 689 (720)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~ 689 (720)
+.+.+........+...+..+.+++.+||..+|++|||+.|+++.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 235 LIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 2222222222233455677899999999999999999999999999865
No 165
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=6.3e-37 Score=317.96 Aligned_cols=257 Identities=25% Similarity=0.398 Sum_probs=204.8
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCc----EEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGK----IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (720)
++|+..+.||+|+||+||+|.+. +++ .||+|.+.... .......+.+|+.++..++||||+++++++.. ...+
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~ 84 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT-SPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQ 84 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC-CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcE
Confidence 56788899999999999999753 444 48999886543 33445678899999999999999999998875 4578
Q ss_pred EEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
+++||+++|+|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 85 l~~~~~~~g~l~~~l~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~ 158 (279)
T cd05109 85 LVTQLMPYGCLLDYVRE---NKDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (279)
T ss_pred EEEEcCCCCCHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceee
Confidence 99999999999999863 235689999999999999999999999 999999999999999999999999999986
Q ss_pred CCCCCccc-cccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 565 TPNTERQV-STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 565 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
........ .....+++.|+|||.+.+..++.++|||||||++|||++ |..||........ .
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-----------------~ 221 (279)
T cd05109 159 LDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREI-----------------P 221 (279)
T ss_pred cccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH-----------------H
Confidence 64332211 122345678999999999999999999999999999998 8999865432111 1
Q ss_pred hhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHH
Q 005001 643 KMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQ 691 (720)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~ 691 (720)
..+........+...+..+.+++.+||+.||++||++.++++.|+++..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05109 222 DLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR 270 (279)
T ss_pred HHHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 1111111112233456778999999999999999999999999987744
No 166
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=4.6e-37 Score=328.48 Aligned_cols=264 Identities=26% Similarity=0.429 Sum_probs=206.3
Q ss_pred hcCCCccceeccCCCcEEEEEEE------cCCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEeec-
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEF------ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEH- 480 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~- 480 (720)
.++|+..+.||+|+||.||+|.+ .+++.||||+++... .......+.+|+.++.++ +||||+++++++...
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 84 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC-ChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence 45799999999999999999963 357889999997543 233456788999999999 689999999987654
Q ss_pred CeEEEEEEecCCCCHHHHhhhccC--------------------------------------------------------
Q 005001 481 GQRLLVYEYVGNGNLHDMLHFADD-------------------------------------------------------- 504 (720)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 504 (720)
...++||||+++|+|.++++....
T Consensus 85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T cd05103 85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 164 (343)
T ss_pred CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence 467899999999999999864211
Q ss_pred -------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccc-cccc
Q 005001 505 -------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV-STQM 576 (720)
Q Consensus 505 -------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~ 576 (720)
....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.......... ....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 241 (343)
T cd05103 165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDA 241 (343)
T ss_pred hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCC
Confidence 012468888999999999999999999 99999999999999999999999999987653322111 1223
Q ss_pred cccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCCCh
Q 005001 577 VGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPA 655 (720)
Q Consensus 577 ~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (720)
.++..|+|||.+.+..++.++||||||+++|||++ |..||........ ..+.+........+.
T Consensus 242 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~----------------~~~~~~~~~~~~~~~ 305 (343)
T cd05103 242 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE----------------FCRRLKEGTRMRAPD 305 (343)
T ss_pred CCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH----------------HHHHHhccCCCCCCC
Confidence 45678999999999999999999999999999997 9999865432110 011111111112233
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHh
Q 005001 656 KSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQR 692 (720)
Q Consensus 656 ~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~ 692 (720)
..+.++.+++..||+.||++||++.||+++|+++.+.
T Consensus 306 ~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 306 YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 3456789999999999999999999999999988653
No 167
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-38 Score=331.76 Aligned_cols=251 Identities=28% Similarity=0.424 Sum_probs=214.7
Q ss_pred CCccceeccCCCcEEEEEEEc--CCc--EEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 412 FSQEFLIGEGSLGRVYRAEFA--NGK--IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 412 y~~~~~lG~G~fg~Vy~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
....++||+|.||.|++|.|. +|+ .||||.++...... ....|++|+..|-+++|||+++|||...+ ....+|+
T Consensus 112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ 189 (1039)
T KOG0199|consen 112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVF 189 (1039)
T ss_pred HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHh
Confidence 345668999999999999775 354 58999998765443 67899999999999999999999999887 6789999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
|.++.|+|.+.|+. .....+-......++.|||.|+.||.++ ++|||||.++|+|+-....+||+|||+.+-+..
T Consensus 190 ELaplGSLldrLrk--a~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ 264 (1039)
T KOG0199|consen 190 ELAPLGSLLDRLRK--AKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGE 264 (1039)
T ss_pred hhcccchHHHHHhh--ccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCC
Confidence 99999999999985 3456788889999999999999999999 999999999999999999999999999998876
Q ss_pred CCcccc--ccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhh
Q 005001 568 TERQVS--TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKM 644 (720)
Q Consensus 568 ~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (720)
.++... ...--...|+|||.+....++.++|||+|||++|||+| |+.||.+.... .+.+.
T Consensus 265 ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~-----------------qIL~~ 327 (1039)
T KOG0199|consen 265 NEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI-----------------QILKN 327 (1039)
T ss_pred CCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH-----------------HHHHh
Confidence 555432 22234568999999999999999999999999999999 88999875542 23344
Q ss_pred cccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 645 VDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 645 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
+|.+.+...|..|++++++++..||..+|++||++..|.+.+
T Consensus 328 iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 328 IDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred ccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 555566677899999999999999999999999999998554
No 168
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=4.6e-37 Score=350.46 Aligned_cols=267 Identities=23% Similarity=0.307 Sum_probs=210.1
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
++|+..++||+|+||.||+|.+. +|+.||+|++..... .......+.+|++++++++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57889999999999999999775 589999999975432 2334567899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccC
Q 005001 488 EYVGNGNLHDMLHFADD-------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~-------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 560 (720)
||++||+|.++++.... .....++..+.+++.||++||+|||+. +|+||||||+||+++.++.++|+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecC
Confidence 99999999999864221 123456778899999999999999999 99999999999999999999999999
Q ss_pred CCccCCCCCc-----------------cccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcc
Q 005001 561 LAALTPNTER-----------------QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRS 623 (720)
Q Consensus 561 ~a~~~~~~~~-----------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~ 623 (720)
++........ ......+||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 9976521110 01122469999999999999999999999999999999999999997633211
Q ss_pred hhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCC-CHHHHHHHHHHHHHhhc
Q 005001 624 EQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRP-PMSEVVQALVRLVQRAS 694 (720)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~ell~~L~~~~~~~~ 694 (720)
.... .....+. ........+..+.+++.+||+.||++|| +++++++.|+..++...
T Consensus 239 i~~~--------------~~i~~P~-~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p 295 (932)
T PRK13184 239 ISYR--------------DVILSPI-EVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSP 295 (932)
T ss_pred hhhh--------------hhccChh-hccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcCc
Confidence 1000 0000000 0001123456788999999999999995 67778888988877543
No 169
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=3e-37 Score=319.89 Aligned_cols=249 Identities=25% Similarity=0.350 Sum_probs=196.8
Q ss_pred eccCCCcEEEEEEEc-CCcEEEEEEccccccCh-HHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecCCCCH
Q 005001 418 IGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL-QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNL 495 (720)
Q Consensus 418 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 495 (720)
||+|+||.||++..+ +|+.||+|++....... .....+..|++++++++||||+++++++......++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999765 58999999986543322 2234556799999999999999999999999999999999999999
Q ss_pred HHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCcccccc
Q 005001 496 HDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQ 575 (720)
Q Consensus 496 ~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 575 (720)
.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++....... ....
T Consensus 81 ~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~--~~~~ 153 (277)
T cd05607 81 KYHIYNV--GERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK--TITQ 153 (277)
T ss_pred HHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc--eeec
Confidence 9888632 234588999999999999999999999 99999999999999999999999999987654322 1223
Q ss_pred ccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCCCh
Q 005001 576 MVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPA 655 (720)
Q Consensus 576 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (720)
..|+..|+|||++.+..++.++||||+||++|||++|+.||.......... ............. ...
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~------------~~~~~~~~~~~~~-~~~ 220 (277)
T cd05607 154 RAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKE------------ELKRRTLEDEVKF-EHQ 220 (277)
T ss_pred cCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHH------------HHHHHhhcccccc-ccc
Confidence 468999999999999999999999999999999999999997543211110 1111111111111 112
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 656 KSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 656 ~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
..+.++.+++.+||+.||++||+++|+++.+
T Consensus 221 ~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 221 NFTEESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred cCCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 3566789999999999999999998776443
No 170
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-37 Score=327.03 Aligned_cols=252 Identities=25% Similarity=0.331 Sum_probs=212.2
Q ss_pred HhcCCCccceeccCCCcEEEEEEEcC-CcEEEEEEccccccC-hHHHHHHHHHHHHhhcCC-CCCccccceEEeecCeEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHGQRL 484 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~ 484 (720)
....|+..+.||+|.||.||++..+. |+.+|+|.+.+.... ......+.+|+++|+++. ||||+.+++.|++....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 34568888899999999999997765 999999999766543 234567889999999997 999999999999999999
Q ss_pred EEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCC----CceEEcccC
Q 005001 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE----LNPHLSDCG 560 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~----~~~kl~Dfg 560 (720)
+|||++.||.|.+.+... .+++..+..++.|++.++.|||+. +|+||||||+|+|+... +.+|++|||
T Consensus 113 lvmEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFG 184 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFG 184 (382)
T ss_pred EEEEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCC
Confidence 999999999999999733 399999999999999999999998 99999999999999643 579999999
Q ss_pred CCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHH
Q 005001 561 LAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDA 640 (720)
Q Consensus 561 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 640 (720)
++..... .......+||+.|+|||++....|+..+||||+||++|.|++|.+||.+........
T Consensus 185 la~~~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-------------- 248 (382)
T KOG0032|consen 185 LAKFIKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-------------- 248 (382)
T ss_pred CceEccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH--------------
Confidence 9988766 344556799999999999999999999999999999999999999998765432221
Q ss_pred HHhhcccc--cCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 641 LAKMVDPA--LNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 641 ~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
++.... .....-......+.++++.|+..||.+|+++.+++++
T Consensus 249 --~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 249 --AILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred --HHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 111111 1111223346778899999999999999999999996
No 171
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=3e-37 Score=328.22 Aligned_cols=254 Identities=22% Similarity=0.271 Sum_probs=201.1
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
++|+..+.||+|+||.||++... +++.||+|++..... .......+.+|..++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 46888999999999999999765 588999999864322 2334566888999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++|+|.+++.. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (331)
T cd05597 81 DYYVGGDLLTLLSK---FEDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA 154 (331)
T ss_pred ecCCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCC
Confidence 99999999999963 245689999999999999999999999 999999999999999999999999999876544
Q ss_pred CCccccccccccccccCcccccc-----CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 568 TERQVSTQMVGAFGYSAPEFALS-----GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
..........||+.|+|||++.. ..++.++|||||||++|||++|+.||......... .
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~----------------~ 218 (331)
T cd05597 155 DGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETY----------------G 218 (331)
T ss_pred CCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHH----------------H
Confidence 33322333569999999999873 45788999999999999999999999754321111 1
Q ss_pred hhcccccCCC---CChhHHHHHHHHHHHhcCCCCCC--CCCHHHHHHH
Q 005001 643 KMVDPALNGM---YPAKSLSRFADIIALCVQPEPEF--RPPMSEVVQA 685 (720)
Q Consensus 643 ~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~--RPs~~ell~~ 685 (720)
++........ .....+..+.+++++|+..++++ ||++.+++++
T Consensus 219 ~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 219 KIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred HHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 1111110001 11235667889999988664444 7899999987
No 172
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=6.7e-37 Score=313.42 Aligned_cols=251 Identities=27% Similarity=0.486 Sum_probs=204.0
Q ss_pred cCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
.+|+..+.||+|+||.||+|.+.++..+|+|.+...... ...+.+|++++++++|||++++++++......++||||
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS---EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEF 80 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCC---HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEc
Confidence 357778899999999999998877889999998754332 45688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
+++++|.++++. ....+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 154 (256)
T cd05112 81 MEHGCLSDYLRA---QRGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ 154 (256)
T ss_pred CCCCcHHHHHHh---CccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCc
Confidence 999999999863 235688999999999999999999999 99999999999999999999999999987654332
Q ss_pred ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccc
Q 005001 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPA 648 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (720)
........++.+|+|||.+.++.++.++||||||+++|||++ |..||....... .. +.....
T Consensus 155 ~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~---~~--------------~~~~~~ 217 (256)
T cd05112 155 YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE---VV--------------ETINAG 217 (256)
T ss_pred ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH---HH--------------HHHhCC
Confidence 222223345678999999998899999999999999999998 999997533211 11 111111
Q ss_pred cCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 649 LNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 649 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
.+...+...+..+.+++.+||+.+|++||++.++++.|
T Consensus 218 ~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 218 FRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 11112233457789999999999999999999999876
No 173
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=3.6e-37 Score=327.60 Aligned_cols=254 Identities=22% Similarity=0.286 Sum_probs=201.8
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
++|...+.||+|+||.||+++.. +++.||+|.+..... .......+.+|..++..++|+||+++++++.+.+..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46889999999999999999775 578899999865322 2233455788899999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++|+|.++++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 81 Ey~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 154 (331)
T cd05624 81 DYYVGGDLLTLLSKF---EDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQ 154 (331)
T ss_pred eCCCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccC
Confidence 999999999999732 35789999999999999999999999 999999999999999999999999999876544
Q ss_pred CCccccccccccccccCcccccc-----CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 568 TERQVSTQMVGAFGYSAPEFALS-----GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
..........||+.|+|||++.+ +.++.++|||||||++|||++|+.||....... ...
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~----------------~~~ 218 (331)
T cd05624 155 DGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE----------------TYG 218 (331)
T ss_pred CCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHH----------------HHH
Confidence 33322334579999999999876 567899999999999999999999997543221 111
Q ss_pred hhcccccCCCCC---hhHHHHHHHHHHHhcCCCCCC--CCCHHHHHHH
Q 005001 643 KMVDPALNGMYP---AKSLSRFADIIALCVQPEPEF--RPPMSEVVQA 685 (720)
Q Consensus 643 ~~~~~~~~~~~~---~~~~~~l~~li~~cl~~dP~~--RPs~~ell~~ 685 (720)
++.....+..++ ...+.++.+++.+|+..++++ |+++++++++
T Consensus 219 ~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 219 KIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred HHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 111111111112 234577889999999876654 4688888866
No 174
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.6e-37 Score=329.69 Aligned_cols=242 Identities=24% Similarity=0.323 Sum_probs=192.1
Q ss_pred ceeccCCCcEEEEEEEc-CCcEEEEEEccccccC-hHHHHHHHHHH-HHhhcCCCCCccccceEEeecCeEEEEEEecCC
Q 005001 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAV-SNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~-~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 492 (720)
+.||+|+||.||+|.+. +++.||+|.+...... ......+..|. .+++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36999999999999775 5778999998754321 22233444444 456778999999999999999999999999999
Q ss_pred CCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccc
Q 005001 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (720)
Q Consensus 493 gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 572 (720)
|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 ~~L~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~-~~ 152 (325)
T cd05602 81 GELFYHLQR----ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN-GT 152 (325)
T ss_pred CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCC-CC
Confidence 999998862 45688889999999999999999999 99999999999999999999999999987543222 12
Q ss_pred cccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCC
Q 005001 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGM 652 (720)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (720)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+.... ..
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~----------------~~~i~~~~--~~ 214 (325)
T cd05602 153 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM----------------YDNILNKP--LQ 214 (325)
T ss_pred cccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHH----------------HHHHHhCC--cC
Confidence 2345799999999999999999999999999999999999999975432111 11111111 11
Q ss_pred CChhHHHHHHHHHHHhcCCCCCCCCCHHHHH
Q 005001 653 YPAKSLSRFADIIALCVQPEPEFRPPMSEVV 683 (720)
Q Consensus 653 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ell 683 (720)
.+...+..+.+++.+||+.||.+||++.+.+
T Consensus 215 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 215 LKPNITNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred CCCCCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 2334567788999999999999999987543
No 175
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.7e-37 Score=329.23 Aligned_cols=239 Identities=25% Similarity=0.359 Sum_probs=191.6
Q ss_pred ceeccCCCcEEEEEEEc-CCcEEEEEEccccccC-hHHHHHHHHHHH-HhhcCCCCCccccceEEeecCeEEEEEEecCC
Q 005001 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVS-NMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 492 (720)
+.||+|+||+||+|.+. +|+.||+|++...... ......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 36999999999999775 6899999998654321 223344455544 56778999999999999999999999999999
Q ss_pred CCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccc
Q 005001 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (720)
Q Consensus 493 gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 572 (720)
|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++....... ..
T Consensus 81 g~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~ 152 (323)
T cd05575 81 GELFFHLQ----RERSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS-KT 152 (323)
T ss_pred CCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCC-Cc
Confidence 99999886 246789999999999999999999999 99999999999999999999999999987532222 22
Q ss_pred cccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCC
Q 005001 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGM 652 (720)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (720)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+..... .
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~----------------~~~~i~~~~~--~ 214 (323)
T cd05575 153 TSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE----------------MYDNILNKPL--R 214 (323)
T ss_pred cccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHH----------------HHHHHHcCCC--C
Confidence 234579999999999999999999999999999999999999997543211 1111111111 1
Q ss_pred CChhHHHHHHHHHHHhcCCCCCCCCCHH
Q 005001 653 YPAKSLSRFADIIALCVQPEPEFRPPMS 680 (720)
Q Consensus 653 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ 680 (720)
.+...+..+.+++.+||+.||++||++.
T Consensus 215 ~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 215 LKPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 2334467788999999999999999985
No 176
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=8.6e-37 Score=312.66 Aligned_cols=250 Identities=27% Similarity=0.457 Sum_probs=206.6
Q ss_pred hcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
.++|+..+.||+|+||.||+|... |+.||+|.+..... ...++.+|+.+++.++|+||+++++++...+..++|||
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 80 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTE 80 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEE
Confidence 356888899999999999999875 78899999975532 46778899999999999999999999998899999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+++++|.++++.. ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||.++.....
T Consensus 81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~ 155 (256)
T cd05039 81 YMAKGSLVDYLRSR--GRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG 155 (256)
T ss_pred ecCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccccc
Confidence 99999999998732 224689999999999999999999999 9999999999999999999999999999766322
Q ss_pred CccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
.. ...++..|+|||.+.+..++.++||||||+++|||++ |..||....... +...+..
T Consensus 156 ~~----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----------------~~~~~~~ 214 (256)
T cd05039 156 QD----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-----------------VVPHVEK 214 (256)
T ss_pred cc----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH-----------------HHHHHhc
Confidence 11 2335668999999998899999999999999999998 999986543211 1111111
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVR 688 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~ 688 (720)
......+...+..+.+++.+||..+|++||++.|+++.|..
T Consensus 215 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 215 GYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred CCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 11222334456788999999999999999999999999864
No 177
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=7.8e-37 Score=313.20 Aligned_cols=248 Identities=25% Similarity=0.382 Sum_probs=199.9
Q ss_pred ceeccCCCcEEEEEEEcC----CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecC
Q 005001 416 FLIGEGSLGRVYRAEFAN----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVG 491 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 491 (720)
++||+|+||.||+|.+.. +..+|+|.+...... ...+.+.+|+++++.++||||+++++++. .+..++||||++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~ 78 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAP 78 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCC
Confidence 369999999999996532 268999999765533 45677899999999999999999999876 456899999999
Q ss_pred CCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCcc
Q 005001 492 NGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571 (720)
Q Consensus 492 ~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 571 (720)
+|+|.+++.. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++........
T Consensus 79 ~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~ 151 (257)
T cd05060 79 LGPLLKYLKK----RREIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY 151 (257)
T ss_pred CCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCcc
Confidence 9999999973 34789999999999999999999999 9999999999999999999999999998866443322
Q ss_pred ccc--cccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccc
Q 005001 572 VST--QMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPA 648 (720)
Q Consensus 572 ~~~--~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (720)
... ...++..|+|||.+.+..++.++|||||||++|||++ |..||........ ... +...
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~---~~~--------------~~~~ 214 (257)
T cd05060 152 YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEV---IAM--------------LESG 214 (257)
T ss_pred cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHH---HHH--------------HHcC
Confidence 211 1223567999999999999999999999999999998 9999975443211 111 1111
Q ss_pred cCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 005001 649 LNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRL 689 (720)
Q Consensus 649 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~ 689 (720)
.....+...+..+.+++.+||..+|++||++.++++.|+++
T Consensus 215 ~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 215 ERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred CcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 11123445667889999999999999999999999999875
No 178
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=8.7e-37 Score=319.75 Aligned_cols=265 Identities=23% Similarity=0.371 Sum_probs=205.1
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-----------------CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCcc
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-----------------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-----------------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 471 (720)
.++|+..+.||+|+||.||++... ++..||+|.+.... .......+.+|+.+++.++|+||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~E~~~l~~l~~~~i~ 82 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA-NKNARNDFLKEIKIMSRLKDPNII 82 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcc
Confidence 457889999999999999998543 23468999987542 334456789999999999999999
Q ss_pred ccceEEeecCeEEEEEEecCCCCHHHHhhhccCC-------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCC
Q 005001 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDS-------SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSA 544 (720)
Q Consensus 472 ~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~-------~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~ 544 (720)
++++++...+..++||||+++|+|.+++...... ...+++.++..++.|++.||+|||+. +++||||||+
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~ 159 (296)
T cd05095 83 RLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATR 159 (296)
T ss_pred eEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChh
Confidence 9999999999999999999999999998753211 23478889999999999999999999 9999999999
Q ss_pred CEEeCCCCceEEcccCCCccCCCCCccc-cccccccccccCccccccCCCcccchhhhHHHHHHHHHh--CCCCCCCCCC
Q 005001 545 NILLDDELNPHLSDCGLAALTPNTERQV-STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT--GRKPLDSSRP 621 (720)
Q Consensus 545 NIll~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt--g~~pf~~~~~ 621 (720)
||+++.++.++|+|||++.......... .....+++.|+|||...++.++.++|||||||++|||++ |..||.....
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05095 160 NCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD 239 (296)
T ss_pred eEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh
Confidence 9999999999999999987654322111 122345678999999988899999999999999999998 7788865432
Q ss_pred cchhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 005001 622 RSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALV 687 (720)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~ 687 (720)
....... ....+..........+..++..+.+++.+||+.||++||++.+|++.|.
T Consensus 240 ~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 240 EQVIENT----------GEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HHHHHHH----------HHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 2111000 0000000001111123345678999999999999999999999999885
No 179
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=7.4e-37 Score=315.62 Aligned_cols=256 Identities=25% Similarity=0.451 Sum_probs=205.7
Q ss_pred cCCCccceeccCCCcEEEEEEEcC-C---cEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFAN-G---KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~~-~---~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
+.|+..+.||+|+||.||+|.... + ..||+|.+.... .......|..|+.+++.++||||+++++++...+..++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 82 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMI 82 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEE
Confidence 357788899999999999997653 3 369999986542 34456789999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
||||+++++|.++++. ..+.+++.++..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++...
T Consensus 83 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~ 156 (269)
T cd05065 83 ITEFMENGALDSFLRQ---NDGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFL 156 (269)
T ss_pred EEecCCCCcHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCcccccc
Confidence 9999999999999863 235689999999999999999999999 9999999999999999999999999998765
Q ss_pred CCCCcccc--cccc--ccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHH
Q 005001 566 PNTERQVS--TQMV--GAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDA 640 (720)
Q Consensus 566 ~~~~~~~~--~~~~--gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 640 (720)
........ .... .+..|+|||.+.+..++.++|||||||++|||++ |..||........ .
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~---~------------ 221 (269)
T cd05065 157 EDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV---I------------ 221 (269)
T ss_pred ccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHH---H------------
Confidence 43222111 1111 2457999999999999999999999999999987 9999975432111 1
Q ss_pred HHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 005001 641 LAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRL 689 (720)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~ 689 (720)
+.+........+..++..+.+++.+||+.+|.+||++.++++.|+++
T Consensus 222 --~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 222 --NAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred --HHHHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11111112223345667789999999999999999999999998765
No 180
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1e-36 Score=314.79 Aligned_cols=251 Identities=26% Similarity=0.442 Sum_probs=198.4
Q ss_pred eeccCCCcEEEEEEEcC-Cc--EEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEEEEEecCC
Q 005001 417 LIGEGSLGRVYRAEFAN-GK--IMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (720)
Q Consensus 417 ~lG~G~fg~Vy~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 492 (720)
.||+|+||.||+|...+ +. .+++|.++... .......+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccC-CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 68999999999998754 43 46888876432 334456788999999999 899999999999999999999999999
Q ss_pred CCHHHHhhhccC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccC
Q 005001 493 GNLHDMLHFADD------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (720)
Q Consensus 493 gsL~~~l~~~~~------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 560 (720)
|+|.++++.... ....+++.++..++.|++.||+|||+. +++||||||+||++++++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCCC
Confidence 999999974321 123578999999999999999999998 99999999999999999999999999
Q ss_pred CCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHH
Q 005001 561 LAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDID 639 (720)
Q Consensus 561 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 639 (720)
++....... .......+..|+|||++.+..++.++|||||||++|||++ |..||........
T Consensus 158 l~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~--------------- 220 (270)
T cd05047 158 LSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL--------------- 220 (270)
T ss_pred Cccccchhh--hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHH---------------
Confidence 985322111 1111234567999999998899999999999999999997 9999965332110
Q ss_pred HHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHH
Q 005001 640 ALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLV 690 (720)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~ 690 (720)
. +.+........+...+.++.+++.+||..||.+||++.++++.|.+++
T Consensus 221 -~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 221 -Y-EKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred -H-HHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 1 111111111223345567899999999999999999999999998875
No 181
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=5.1e-37 Score=320.21 Aligned_cols=260 Identities=26% Similarity=0.431 Sum_probs=207.4
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc------CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecC
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG 481 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 481 (720)
..++|+..+.||+|+||.||+|... ++..||+|.+.... .......+.+|+.++++++||||+++++++...+
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~ 81 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDHPNIVKLLGVCAVGK 81 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc-CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC
Confidence 3467889999999999999999764 46789999987543 3344567889999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhhccC------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCC
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADD------------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKS 543 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~------------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp 543 (720)
..++||||+++|+|.+++..... ....+++.++..++.|++.||+|||+. +++||||||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p 158 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLAT 158 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccH
Confidence 99999999999999999974211 123478889999999999999999999 999999999
Q ss_pred CCEEeCCCCceEEcccCCCccCCCCCcc-ccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCC
Q 005001 544 ANILLDDELNPHLSDCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRP 621 (720)
Q Consensus 544 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~ 621 (720)
+||+++.++.++|+|||++......... ......++..|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 159 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~ 238 (288)
T cd05050 159 RNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH 238 (288)
T ss_pred hheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 9999999999999999998754332211 1122345678999999999999999999999999999998 8888865432
Q ss_pred cchhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 005001 622 RSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVR 688 (720)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~ 688 (720)
.. ......+... ...+...+.++.+++.+||+.||++||++.|+++.|++
T Consensus 239 ~~----------------~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 239 EE----------------VIYYVRDGNV-LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred HH----------------HHHHHhcCCC-CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 11 1111111111 12234556789999999999999999999999999863
No 182
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=9.1e-38 Score=332.44 Aligned_cols=266 Identities=23% Similarity=0.316 Sum_probs=204.9
Q ss_pred HHhcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCC-C-----CCccccceEEee
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-H-----PNIVTLAGYCAE 479 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h-----~niv~l~~~~~~ 479 (720)
...-+|.+.+.||+|+||.|.+|.+ ++++.||||++++.. ....+-..|+.+|..++ | -|+|+++++|..
T Consensus 183 ~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k---~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f 259 (586)
T KOG0667|consen 183 HIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK---RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF 259 (586)
T ss_pred eeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh---HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc
Confidence 3344899999999999999999954 579999999998753 33445567788888775 3 479999999999
Q ss_pred cCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCC--CceEEc
Q 005001 480 HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE--LNPHLS 557 (720)
Q Consensus 480 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~--~~~kl~ 557 (720)
.++.|||+|.++. +|+++++... ...++...++.|+.||+.||.+||+. +|||+||||+|||+.+. ..+||+
T Consensus 260 r~HlciVfELL~~-NLYellK~n~--f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVI 333 (586)
T KOG0667|consen 260 RNHLCIVFELLST-NLYELLKNNK--FRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVI 333 (586)
T ss_pred ccceeeeehhhhh-hHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEE
Confidence 9999999999965 9999998543 45689999999999999999999999 99999999999999754 369999
Q ss_pred ccCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhc-----
Q 005001 558 DCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWAT----- 632 (720)
Q Consensus 558 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~----- 632 (720)
|||.|+....... ..+-+..|+|||++.|.+|+.+.||||||||++||++|.+.|.+.++.+....+.-..
T Consensus 334 DFGSSc~~~q~vy----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~ 409 (586)
T KOG0667|consen 334 DFGSSCFESQRVY----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPP 409 (586)
T ss_pred ecccccccCCcce----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCH
Confidence 9999987654332 4677889999999999999999999999999999999988888776544433332100
Q ss_pred --------------c-----ccccHHH---------HHhhcc-cccCCCCC-----------hhHHHHHHHHHHHhcCCC
Q 005001 633 --------------P-----QLHDIDA---------LAKMVD-PALNGMYP-----------AKSLSRFADIIALCVQPE 672 (720)
Q Consensus 633 --------------~-----~~~~~~~---------~~~~~~-~~~~~~~~-----------~~~~~~l~~li~~cl~~d 672 (720)
. ....... ..+... .......| ......+.+++++||.+|
T Consensus 410 ~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~d 489 (586)
T KOG0667|consen 410 KMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWD 489 (586)
T ss_pred HHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccC
Confidence 0 0000000 000000 00000011 123457899999999999
Q ss_pred CCCCCCHHHHHHH
Q 005001 673 PEFRPPMSEVVQA 685 (720)
Q Consensus 673 P~~RPs~~ell~~ 685 (720)
|.+|+|+.+++++
T Consensus 490 P~~R~tp~qal~H 502 (586)
T KOG0667|consen 490 PAERITPAQALNH 502 (586)
T ss_pred chhcCCHHHHhcC
Confidence 9999999999987
No 183
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=3.8e-37 Score=320.47 Aligned_cols=253 Identities=25% Similarity=0.378 Sum_probs=203.5
Q ss_pred CCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccC-hHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 412 FSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 412 y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
|+..+.||+|+||.||++... +++.||+|.+...... ......+.+|+.++++++|+||+.+++.+...+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 667789999999999999765 6889999998654332 22345677899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
+++++|.+++... ....+++.++..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||++.......
T Consensus 82 ~~g~~L~~~l~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 82 MNGGDLKFHIYHM--GEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred cCCCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc
Confidence 9999999988632 234689999999999999999999998 99999999999999999999999999987553322
Q ss_pred ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccccc
Q 005001 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPAL 649 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (720)
. .....||..|+|||++.+..++.++|||||||++|||++|+.||........... ...... ..
T Consensus 157 ~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~-------------~~~~~~-~~ 220 (285)
T cd05630 157 T--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREE-------------VERLVK-EV 220 (285)
T ss_pred c--ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHH-------------HHhhhh-hh
Confidence 1 1234789999999999999999999999999999999999999976432211110 111110 01
Q ss_pred CCCCChhHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHH
Q 005001 650 NGMYPAKSLSRFADIIALCVQPEPEFRPP-----MSEVVQA 685 (720)
Q Consensus 650 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~ell~~ 685 (720)
...++...+..+.+|+.+||+.||++||+ ++|++++
T Consensus 221 ~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 221 QEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred hhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 11233445667889999999999999999 8888875
No 184
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=4.4e-37 Score=330.99 Aligned_cols=266 Identities=21% Similarity=0.287 Sum_probs=202.1
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecC-----
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG----- 481 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 481 (720)
..++|+..+.||+|+||.||+|... +|+.||+|++............+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 3578999999999999999999764 5889999999765444455677889999999999999999999886543
Q ss_pred -eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccC
Q 005001 482 -QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (720)
Q Consensus 482 -~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 560 (720)
..++||||+++ +|.+.++ ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg 168 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIH------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 168 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHh------ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCC
Confidence 57999999975 6766664 3578899999999999999999999 99999999999999999999999999
Q ss_pred CCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhh-HHHh-hccccccH
Q 005001 561 LAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQS-LVRW-ATPQLHDI 638 (720)
Q Consensus 561 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~-~~~~-~~~~~~~~ 638 (720)
+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...+...... .... ..+.....
T Consensus 169 ~a~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 246 (359)
T cd07876 169 LARTACTN--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFM 246 (359)
T ss_pred CccccccC--ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHH
Confidence 98754322 12234578999999999999999999999999999999999999998654321110 0000 00000000
Q ss_pred H----HHHhhccc--ccC----------------CCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 639 D----ALAKMVDP--ALN----------------GMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 639 ~----~~~~~~~~--~~~----------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
. ........ ... .......+..+.+|+.+||+.||++|||+.|++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 247 NRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0 00000000 000 00111234568899999999999999999999986
No 185
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=7e-37 Score=313.15 Aligned_cols=251 Identities=23% Similarity=0.362 Sum_probs=205.5
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
+|+..+.||+|+||.||++... +++.||+|.+.... .....+.+.+|+.+++.++|+||+++++.+...+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK-SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEY 79 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc-chHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEee
Confidence 4778899999999999999765 68899999886433 233456778899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
+++++|.+++... ....+++..+..++.|++.||.|||+. +|+|+||||+||++++++.++++|||.+.......
T Consensus 80 ~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 154 (255)
T cd08219 80 CDGGDLMQKIKLQ--RGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG 154 (255)
T ss_pred CCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeecccc
Confidence 9999999988632 245688999999999999999999999 99999999999999999999999999987654322
Q ss_pred ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccccc
Q 005001 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPAL 649 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (720)
. ......|++.|+|||++.+..++.++|+||||+++|+|++|..||......... ..... ..
T Consensus 155 ~-~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~----------------~~~~~-~~ 216 (255)
T cd08219 155 A-YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLI----------------LKVCQ-GS 216 (255)
T ss_pred c-ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHH----------------HHHhc-CC
Confidence 2 223456899999999999989999999999999999999999999754321110 11111 11
Q ss_pred CCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 650 NGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 650 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
....+...+..+.+++.+||+.||++||++.+++.+
T Consensus 217 ~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 217 YKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 112334456678899999999999999999999865
No 186
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.1e-36 Score=317.03 Aligned_cols=271 Identities=21% Similarity=0.372 Sum_probs=206.8
Q ss_pred cCCCccceeccCCCcEEEEEEE-----cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec--Ce
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEF-----ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQ 482 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~ 482 (720)
+.|...+.||+|+||.||++.. .++..||+|.++... .......+.+|+++++.++||||+++.+++... ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence 3467888999999999999974 357889999987543 334456789999999999999999999998775 56
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCC
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a 562 (720)
.++||||+++++|.+++.. ....+++.++..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++
T Consensus 83 ~~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~ 156 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPR---NKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLT 156 (284)
T ss_pred eEEEEEccCCCCHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCccc
Confidence 8999999999999999863 234689999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCcc--ccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHH
Q 005001 563 ALTPNTERQ--VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDA 640 (720)
Q Consensus 563 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 640 (720)
+........ ......++..|+|||.+.+..++.++|||||||++|||++++.|+....... ............ ...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~-~~~~~~~~~~~~-~~~ 234 (284)
T cd05079 157 KAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLF-LKMIGPTHGQMT-VTR 234 (284)
T ss_pred cccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchh-hhhccccccccc-HHH
Confidence 865433221 1123456778999999998889999999999999999999877653321100 000000000000 011
Q ss_pred HHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 005001 641 LAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRL 689 (720)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~ 689 (720)
..+..........+...+..+.+|+.+||+.||++||+++++++.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 235 LVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 1111111222223445677899999999999999999999999999876
No 187
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=8.3e-37 Score=319.73 Aligned_cols=265 Identities=22% Similarity=0.348 Sum_probs=204.4
Q ss_pred hcCCCccceeccCCCcEEEEEEEcC---------------CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCcccc
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFAN---------------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL 473 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~---------------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 473 (720)
.++|++.+.||+|+||.||++...+ ...||+|+++... .......+.+|++++++++|+||+++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~ 82 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV-TKTARNDFLKEIKIMSRLKNPNIIRL 82 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCcCeE
Confidence 4678999999999999999996542 2358999987543 34455678999999999999999999
Q ss_pred ceEEeecCeEEEEEEecCCCCHHHHhhhccC--------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCC
Q 005001 474 AGYCAEHGQRLLVYEYVGNGNLHDMLHFADD--------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSAN 545 (720)
Q Consensus 474 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~--------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~N 545 (720)
++++...+..++||||+++++|.+++..... ....+++..+..++.|++.||+|||+. +++||||||+|
T Consensus 83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~N 159 (295)
T cd05097 83 LGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRN 159 (295)
T ss_pred EEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhh
Confidence 9999999999999999999999999864221 112468899999999999999999999 99999999999
Q ss_pred EEeCCCCceEEcccCCCccCCCCCcc-ccccccccccccCccccccCCCcccchhhhHHHHHHHHHh--CCCCCCCCCCc
Q 005001 546 ILLDDELNPHLSDCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT--GRKPLDSSRPR 622 (720)
Q Consensus 546 Ill~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt--g~~pf~~~~~~ 622 (720)
|+++.++.+||+|||++......... ......++..|+|||.+.++.++.++|||||||++|||++ |..||......
T Consensus 160 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~ 239 (295)
T cd05097 160 CLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE 239 (295)
T ss_pred EEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH
Confidence 99999999999999998765432211 1122345778999999999999999999999999999998 66777654322
Q ss_pred chhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 005001 623 SEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALV 687 (720)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~ 687 (720)
....... ..............+...+..+.+++.+||+.||++||++.+|++.|.
T Consensus 240 ~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 240 QVIENTG----------EFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHHHHH----------HhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 1111000 000000000111123335578999999999999999999999999885
No 188
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.4e-36 Score=313.65 Aligned_cols=259 Identities=25% Similarity=0.377 Sum_probs=207.3
Q ss_pred hcCCCccceeccCCCcEEEEEEEcC----CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFAN----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (720)
.++|...+.||+|+||.||+|.+.+ ...|++|...... .....+.+.+|+.++++++||||+++++++.. +..+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~ 82 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT-SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVW 82 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcE
Confidence 3457788899999999999997643 2468889886443 24455678999999999999999999998875 5678
Q ss_pred EEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
+||||+++|+|.+++.. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++..
T Consensus 83 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~ 156 (270)
T cd05056 83 IVMELAPLGELRSYLQV---NKYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRY 156 (270)
T ss_pred EEEEcCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeee
Confidence 99999999999999963 234689999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHh
Q 005001 565 TPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAK 643 (720)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (720)
.............++..|+|||.+.+..++.++||||||+++|||++ |..||.......... .
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~----------------~ 220 (270)
T cd05056 157 LEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIG----------------R 220 (270)
T ss_pred cccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH----------------H
Confidence 54432222223345568999999988889999999999999999996 999997554321111 1
Q ss_pred hcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHh
Q 005001 644 MVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQR 692 (720)
Q Consensus 644 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~ 692 (720)
.. .......+..++..+.+++.+||..+|.+||++.++++.|.++.+.
T Consensus 221 ~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 221 IE-NGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred HH-cCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 10 1111123445667899999999999999999999999999987654
No 189
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=7.4e-37 Score=325.47 Aligned_cols=254 Identities=22% Similarity=0.275 Sum_probs=201.5
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
++|...+.||+|+||.||++... +++.||+|.+.+... .......+.+|..++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 46888999999999999999776 477899999864332 2233455788899999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++|+|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 81 ey~~~g~L~~~l~~---~~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~ 154 (332)
T cd05623 81 DYYVGGDLLTLLSK---FEDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLME 154 (332)
T ss_pred eccCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheeccc
Confidence 99999999999973 235689999999999999999999999 999999999999999999999999999875533
Q ss_pred CCccccccccccccccCccccc-----cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 568 TERQVSTQMVGAFGYSAPEFAL-----SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
..........||+.|+|||++. ...++.++|||||||++|||++|+.||........ ..
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~----------------~~ 218 (332)
T cd05623 155 DGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET----------------YG 218 (332)
T ss_pred CCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHH----------------HH
Confidence 3322233457999999999986 34688999999999999999999999975432211 11
Q ss_pred hhcccccCCCC---ChhHHHHHHHHHHHhcCCCCCC--CCCHHHHHHH
Q 005001 643 KMVDPALNGMY---PAKSLSRFADIIALCVQPEPEF--RPPMSEVVQA 685 (720)
Q Consensus 643 ~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~--RPs~~ell~~ 685 (720)
++.....+..+ ....+.++.+++++|+..++.+ |+++.|++++
T Consensus 219 ~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 219 KIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred HHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 11111111111 2245677889999999765554 6899999887
No 190
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=9.2e-37 Score=319.54 Aligned_cols=265 Identities=26% Similarity=0.388 Sum_probs=206.8
Q ss_pred hcCCCccceeccCCCcEEEEEEEcC-----------------CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCcc
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFAN-----------------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 471 (720)
.++|+..+.||+|+||.||+|...+ +..||+|.+.... .....+.+.+|++++++++||||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~ 82 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA-SDNAREDFLKEVKILSRLSDPNIA 82 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhcCCCCEe
Confidence 4578899999999999999997642 2458999887543 334567889999999999999999
Q ss_pred ccceEEeecCeEEEEEEecCCCCHHHHhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCC
Q 005001 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD-------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSA 544 (720)
Q Consensus 472 ~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~-------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~ 544 (720)
++++++..++..++|+||+++++|.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~ 159 (296)
T cd05051 83 RLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATR 159 (296)
T ss_pred EEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchh
Confidence 999999999999999999999999999974331 123689999999999999999999998 9999999999
Q ss_pred CEEeCCCCceEEcccCCCccCCCCCc-cccccccccccccCccccccCCCcccchhhhHHHHHHHHHh--CCCCCCCCCC
Q 005001 545 NILLDDELNPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT--GRKPLDSSRP 621 (720)
Q Consensus 545 NIll~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt--g~~pf~~~~~ 621 (720)
||+++.++.++|+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05051 160 NCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD 239 (296)
T ss_pred ceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh
Confidence 99999999999999999876543321 12223456788999999999899999999999999999998 6778865432
Q ss_pred cchhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 005001 622 RSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALV 687 (720)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~ 687 (720)
... ..... ...+..........+...+.++.+++.+||+.||++||++.||++.|.
T Consensus 240 ~~~---~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 240 QQV---IENAG-------HFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HHH---HHHHH-------hccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 111 11000 000000011111123345678999999999999999999999998875
No 191
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=4.8e-37 Score=316.59 Aligned_cols=255 Identities=26% Similarity=0.388 Sum_probs=202.3
Q ss_pred hcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.++|+..+.||+|+||.||+|.. .+++.||+|++.... ......+.+|+.++++++||||+++++++..++..++||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~--~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~ 85 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP--GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICM 85 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc--cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEE
Confidence 35788999999999999999976 468899999986432 223456778999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++++|.++++. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||++.....
T Consensus 86 e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06646 86 EYCGGGSLQDIYHV----TGPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITA 158 (267)
T ss_pred eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeecc
Confidence 99999999998862 45789999999999999999999999 999999999999999999999999999876533
Q ss_pred CCccccccccccccccCccccc---cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhh
Q 005001 568 TERQVSTQMVGAFGYSAPEFAL---SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKM 644 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (720)
.. .......|++.|+|||.+. ...++.++|||||||++|||++|+.||....+....... ... ..
T Consensus 159 ~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~--~~~---------~~ 226 (267)
T cd06646 159 TI-AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM--SKS---------NF 226 (267)
T ss_pred cc-cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheee--ecC---------CC
Confidence 22 1123356889999999885 345788999999999999999999999654322111000 000 00
Q ss_pred cccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 645 VDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 645 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
..+ ........+..+.+++++||+.||++||+++++++++
T Consensus 227 ~~~--~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 227 QPP--KLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred CCC--CCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 000 0011223456789999999999999999999999764
No 192
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=4e-37 Score=326.12 Aligned_cols=243 Identities=21% Similarity=0.321 Sum_probs=196.5
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCC-CCCccccceEEeecCeEEEEE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV~ 487 (720)
+|+..+.||+|+||.||+|... +|+.||+|++..... .......+..|..++..+. |++|+++++++...+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3667789999999999999765 688999999875432 2233456777888888775 577888999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++|+|.+++. ....+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 81 Ey~~~g~L~~~i~----~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~ 153 (323)
T cd05615 81 EYVNGGDLMYHIQ----QVGKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMV 153 (323)
T ss_pred cCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCC
Confidence 9999999999886 246789999999999999999999999 999999999999999999999999999875432
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
.. .......||+.|+|||++.+..++.++||||+||++|||++|+.||........ ...+...
T Consensus 154 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~----------------~~~i~~~ 216 (323)
T cd05615 154 DG-VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL----------------FQSIMEH 216 (323)
T ss_pred CC-ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHH----------------HHHHHhC
Confidence 22 122345699999999999999999999999999999999999999976432111 1111111
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPPM 679 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 679 (720)
...++...+.++.+++.+||+.||.+|++.
T Consensus 217 --~~~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 217 --NVSYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred --CCCCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 112344556778899999999999999985
No 193
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.6e-36 Score=323.26 Aligned_cols=266 Identities=27% Similarity=0.441 Sum_probs=210.9
Q ss_pred HhcCCCccceeccCCCcEEEEEEEcC--------CcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEe
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFAN--------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCA 478 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 478 (720)
...+|.+.+.||+|+||.||+|.... +..||+|.+.... .......+.+|+++++++ +||||+++++++.
T Consensus 10 ~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (334)
T cd05100 10 SRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA-TDKDLSDLVSEMEMMKMIGKHKNIINLLGACT 88 (334)
T ss_pred CHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEc
Confidence 34568889999999999999996531 2368999886432 344567888999999999 8999999999999
Q ss_pred ecCeEEEEEEecCCCCHHHHhhhccC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCE
Q 005001 479 EHGQRLLVYEYVGNGNLHDMLHFADD------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANI 546 (720)
Q Consensus 479 ~~~~~~lV~e~~~~gsL~~~l~~~~~------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NI 546 (720)
..+..++|+||+++|+|.+++..... ....+++.++..++.|++.||+|||+. +++||||||+||
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Ni 165 (334)
T cd05100 89 QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNV 165 (334)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceE
Confidence 99999999999999999999874321 234588899999999999999999999 999999999999
Q ss_pred EeCCCCceEEcccCCCccCCCCCccc-cccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcch
Q 005001 547 LLDDELNPHLSDCGLAALTPNTERQV-STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSE 624 (720)
Q Consensus 547 ll~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~ 624 (720)
+++.++.+||+|||+++......... .....++..|+|||++.+..++.++|||||||++|||++ |..||.......
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~- 244 (334)
T cd05100 166 LVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE- 244 (334)
T ss_pred EEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHH-
Confidence 99999999999999987654322111 122234567999999999999999999999999999998 888886543211
Q ss_pred hhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhc
Q 005001 625 QSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRAS 694 (720)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 694 (720)
..+.+........+...+..+.+++.+||+.+|++||++.|+++.|.++.....
T Consensus 245 ----------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~~ 298 (334)
T cd05100 245 ----------------LFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVTS 298 (334)
T ss_pred ----------------HHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhcC
Confidence 111111111222344556789999999999999999999999999999875443
No 194
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=4.9e-37 Score=351.44 Aligned_cols=263 Identities=21% Similarity=0.310 Sum_probs=206.9
Q ss_pred cHHHHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEee--c
Q 005001 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE--H 480 (720)
Q Consensus 404 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~ 480 (720)
..+...++|.+.+.||+|+||+||+|.+. +++.||+|.+............+..|+.+++.++||||++++++|.. .
T Consensus 7 ~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~ 86 (1021)
T PTZ00266 7 DGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKAN 86 (1021)
T ss_pred CCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCC
Confidence 34455678999999999999999999775 57788999987665555667789999999999999999999998854 4
Q ss_pred CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC----CCcEEecCCCCCEEeCC------
Q 005001 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL----PSVVHRNFKSANILLDD------ 550 (720)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~----~~iiH~Dlkp~NIll~~------ 550 (720)
+.+|+||||+++|+|.+++.........+++..++.|+.||+.||+|||+... .+||||||||+|||++.
T Consensus 87 ~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg 166 (1021)
T PTZ00266 87 QKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIG 166 (1021)
T ss_pred CEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccc
Confidence 56899999999999999997544445679999999999999999999998521 25999999999999964
Q ss_pred -----------CCceEEcccCCCccCCCCCccccccccccccccCcccccc--CCCcccchhhhHHHHHHHHHhCCCCCC
Q 005001 551 -----------ELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALS--GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (720)
Q Consensus 551 -----------~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~~pf~ 617 (720)
.+.+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||++|..||.
T Consensus 167 ~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s--~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~ 244 (1021)
T PTZ00266 167 KITAQANNLNGRPIAKIGDFGLSKNIGIES--MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFH 244 (1021)
T ss_pred cccccccccCCCCceEEccCCccccccccc--cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCC
Confidence 3358999999997653321 2234579999999999864 458899999999999999999999997
Q ss_pred CCCCcchhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 618 SSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
....... +...+..... ......+..+.+||..||+.+|.+||++.+++++
T Consensus 245 ~~~~~~q----------------li~~lk~~p~-lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 245 KANNFSQ----------------LISELKRGPD-LPIKGKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred cCCcHHH----------------HHHHHhcCCC-CCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 5432111 0111111100 0112345678999999999999999999999954
No 195
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.3e-36 Score=311.19 Aligned_cols=253 Identities=23% Similarity=0.383 Sum_probs=209.6
Q ss_pred CCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 411 SFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
+|+..+.||+|+||.||.++. .+++.+++|++............+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 478889999999999999965 4688999999876655566677888999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
+++++|.+++... ....+++.++..++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 81 ANGGTLYDKIVRQ--KGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred cCCCcHHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence 9999999998732 245689999999999999999999998 99999999999999999999999999987654433
Q ss_pred ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccccc
Q 005001 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPAL 649 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (720)
. ......|++.|+|||.+.+..++.++||||||+++|||++|..||....... ...+......
T Consensus 156 ~-~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~----------------~~~~~~~~~~ 218 (256)
T cd08221 156 S-MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN----------------LVVKIVQGNY 218 (256)
T ss_pred c-cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH----------------HHHHHHcCCC
Confidence 2 2334568999999999998889999999999999999999999997543221 1111111111
Q ss_pred CCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 650 NGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 650 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
. ..+...+.++.+++.+||+.+|++||+++++++++
T Consensus 219 ~-~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 219 T-PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred C-CCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 1 12234567788999999999999999999999763
No 196
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.4e-36 Score=311.69 Aligned_cols=250 Identities=31% Similarity=0.497 Sum_probs=206.7
Q ss_pred ceeccCCCcEEEEEEEcC----CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecC
Q 005001 416 FLIGEGSLGRVYRAEFAN----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVG 491 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 491 (720)
+.||+|+||.||+|.... +..|++|.+....... ....+.+|++.++.++|+||+++++++...+..++||||++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 79 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYME 79 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEecc
Confidence 369999999999997754 7889999997654333 46788999999999999999999999999999999999999
Q ss_pred CCCHHHHhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 492 NGNLHDMLHFADDS-----SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 492 ~gsL~~~l~~~~~~-----~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
+++|.++++..... ...+++.++..++.|++.||+|||+. +++||||||+||+++.++.++|+|||.+....
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 156 (262)
T cd00192 80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVY 156 (262)
T ss_pred CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccccccccc
Confidence 99999999743211 47789999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCc-cccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhh
Q 005001 567 NTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKM 644 (720)
Q Consensus 567 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (720)
.... .......++..|+|||.+.+..++.++||||+|+++|||++ |..||....... ..+.
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----------------~~~~ 219 (262)
T cd00192 157 DDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE-----------------VLEY 219 (262)
T ss_pred cccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH-----------------HHHH
Confidence 4331 12233467889999999998899999999999999999999 699997653211 1111
Q ss_pred cccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 645 VDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 645 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
+........+...+.++.+++.+||+.+|++||++.++++.|
T Consensus 220 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l 261 (262)
T cd00192 220 LRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERL 261 (262)
T ss_pred HHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 111222234555678899999999999999999999999887
No 197
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=2.6e-37 Score=316.99 Aligned_cols=253 Identities=30% Similarity=0.524 Sum_probs=204.0
Q ss_pred CCccceeccCCCcEEEEEEEcC-CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEec
Q 005001 412 FSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYV 490 (720)
Q Consensus 412 y~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 490 (720)
|+..+.||+|+||+||++.... ++.||+|.+..............+|+.++++++||||+++++++......++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 5677899999999999998764 668999999876554444445566999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCc
Q 005001 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER 570 (720)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 570 (720)
++++|.+++. ....+++.++..++.|+++||++||+. +|+|+||||+||+++.++.++|+|||.+..... ..
T Consensus 81 ~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~-~~ 152 (260)
T PF00069_consen 81 PGGSLQDYLQ----KNKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSE-NN 152 (260)
T ss_dssp TTEBHHHHHH----HHSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTS-TT
T ss_pred cccccccccc----ccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc-cc
Confidence 9999999997 357789999999999999999999999 999999999999999999999999999875421 22
Q ss_pred cccccccccccccCccccc-cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccccc
Q 005001 571 QVSTQMVGAFGYSAPEFAL-SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPAL 649 (720)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (720)
.......++..|+|||++. +..++.++||||+|+++|+|++|..||............ .+......
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~-------------~~~~~~~~ 219 (260)
T PF00069_consen 153 ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEII-------------EKILKRPL 219 (260)
T ss_dssp SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHH-------------HHHHHTHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhh-------------hhcccccc
Confidence 2334567899999999998 888999999999999999999999999865211111111 11110000
Q ss_pred --CCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 650 --NGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 650 --~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
...........+.+++.+||+.||++||++.+++++
T Consensus 220 ~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 220 PSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp HHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred cccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000011123789999999999999999999999863
No 198
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.7e-36 Score=319.29 Aligned_cols=266 Identities=23% Similarity=0.379 Sum_probs=206.4
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
++|+..+.||+|+||.||++.+. ++..||+|.+.... .......+.+|++++.+++||||+++++++..++..++|||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI-KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICME 79 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEee
Confidence 36888999999999999999765 57888998886432 33445678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+++++|.++++. ...+++..+..++.|+++||.|||+.+ +++||||||+||+++.++.++|+|||++......
T Consensus 80 y~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (308)
T cd06615 80 HMDGGSLDQVLKK----AGRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 153 (308)
T ss_pred ccCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCccccccc
Confidence 9999999999973 366899999999999999999999742 8999999999999999999999999998754322
Q ss_pred CccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccc------------
Q 005001 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLH------------ 636 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~------------ 636 (720)
......|+..|+|||.+.+..++.++|||||||++|||++|+.||....................
T Consensus 154 ---~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (308)
T cd06615 154 ---MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHP 230 (308)
T ss_pred ---ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCC
Confidence 12345789999999999888899999999999999999999999975443221111110000000
Q ss_pred --------cHHHHHhhcccccCCCCC-hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 637 --------DIDALAKMVDPALNGMYP-AKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 637 --------~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
..+......... ....+ ...+.++.+++.+||..||++||++.+++++-
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 231 PDSPRPMAIFELLDYIVNEP-PPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred CCccchhhHHHHHHHHhcCC-CccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 000111111111 11111 12456789999999999999999999999873
No 199
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1e-36 Score=316.49 Aligned_cols=256 Identities=26% Similarity=0.432 Sum_probs=204.5
Q ss_pred cCCCccceeccCCCcEEEEEEEc------CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (720)
.+|+..+.||+|+||.||++... ++..+++|.+... .......+.+|++.++.++|+||+++++++...+..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 82 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPL 82 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC--CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCce
Confidence 46777889999999999999642 3567899988643 334456789999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhccC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCC
Q 005001 484 LLVYEYVGNGNLHDMLHFADD-----------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL 552 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~-----------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~ 552 (720)
++||||+++++|.++++.... ....+++..+..++.|++.|++|||+. +++||||||+||++++++
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~ 159 (280)
T cd05092 83 LMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGL 159 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCC
Confidence 999999999999999974321 113588999999999999999999999 999999999999999999
Q ss_pred ceEEcccCCCccCCCCCc-cccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHh
Q 005001 553 NPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRW 630 (720)
Q Consensus 553 ~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~ 630 (720)
.+||+|||++........ .......+++.|+|||.+.+..++.++|||||||++|||++ |..||........
T Consensus 160 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~------ 233 (280)
T cd05092 160 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA------ 233 (280)
T ss_pred CEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH------
Confidence 999999999875433221 11222345788999999999999999999999999999998 8999865432211
Q ss_pred hccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 005001 631 ATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALV 687 (720)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~ 687 (720)
...... ......+..++..+.+++.+||+.||++||+++||++.|+
T Consensus 234 ----------~~~~~~-~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 234 ----------IECITQ-GRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred ----------HHHHHc-CccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 111111 1111223445677899999999999999999999999875
No 200
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=4.2e-37 Score=326.50 Aligned_cols=251 Identities=22% Similarity=0.328 Sum_probs=198.2
Q ss_pred ceeccCCCcEEEEEEEc-CCcEEEEEEccccccC-hHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEEEEEecCC
Q 005001 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 492 (720)
+.||+|+||.||+|... +++.||+|++...... ......+.+|..++.++ +||||+.+++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999765 5788999999765432 23445678888888887 699999999999999999999999999
Q ss_pred CCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccc
Q 005001 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (720)
Q Consensus 493 gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 572 (720)
|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++........ .
T Consensus 81 ~~L~~~~~----~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~-~ 152 (327)
T cd05617 81 GDLMFHMQ----RQRKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGD-T 152 (327)
T ss_pred CcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCC-c
Confidence 99998886 245799999999999999999999999 999999999999999999999999999875322221 2
Q ss_pred cccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCC
Q 005001 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGM 652 (720)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (720)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||............. .....+.... ..
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~---------~~~~~~~~~~--~~ 221 (327)
T cd05617 153 TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTED---------YLFQVILEKP--IR 221 (327)
T ss_pred eecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHH---------HHHHHHHhCC--CC
Confidence 234679999999999999999999999999999999999999996432211110000 0111111111 12
Q ss_pred CChhHHHHHHHHHHHhcCCCCCCCCCH------HHHHHH
Q 005001 653 YPAKSLSRFADIIALCVQPEPEFRPPM------SEVVQA 685 (720)
Q Consensus 653 ~~~~~~~~l~~li~~cl~~dP~~RPs~------~ell~~ 685 (720)
.|...+..+.+++.+||+.||++|+++ .+++++
T Consensus 222 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 222 IPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence 344566778899999999999999985 466544
No 201
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.5e-36 Score=311.05 Aligned_cols=249 Identities=26% Similarity=0.390 Sum_probs=202.0
Q ss_pred ceeccCCCcEEEEEEEcC--C--cEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecC
Q 005001 416 FLIGEGSLGRVYRAEFAN--G--KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVG 491 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~~--~--~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 491 (720)
+.||+|++|.||+|.+.+ + ..||+|.+...... ...+.+.+|+..+++++||||+++++++.. ...++|+||++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~ 78 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAP 78 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecC
Confidence 368999999999997643 3 36899999876543 556788999999999999999999999888 88999999999
Q ss_pred CCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCcc
Q 005001 492 NGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571 (720)
Q Consensus 492 ~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 571 (720)
+++|.+++.... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.........
T Consensus 79 ~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 153 (257)
T cd05040 79 LGSLLDRLRKDA--LGHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH 153 (257)
T ss_pred CCcHHHHHHhcc--cccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccccc
Confidence 999999997422 15689999999999999999999999 9999999999999999999999999999876443221
Q ss_pred c--cccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccc
Q 005001 572 V--STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPA 648 (720)
Q Consensus 572 ~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (720)
. .....++..|+|||.+.+..++.++|||||||++|||++ |+.||.......... ......
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~----------------~~~~~~ 217 (257)
T cd05040 154 YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILK----------------KIDKEG 217 (257)
T ss_pred eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHH----------------HHHhcC
Confidence 1 123457789999999999999999999999999999999 999997543221111 011011
Q ss_pred cCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 005001 649 LNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALV 687 (720)
Q Consensus 649 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~ 687 (720)
.....+...+..+.+++.+||+.+|++||++.++++.|.
T Consensus 218 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 218 ERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 112233445678999999999999999999999999874
No 202
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=4.1e-37 Score=326.03 Aligned_cols=239 Identities=24% Similarity=0.357 Sum_probs=191.4
Q ss_pred ceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHH-HHhhcCCCCCccccceEEeecCeEEEEEEecCC
Q 005001 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAV-SNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~-~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 492 (720)
++||+|+||.||+|+.. +++.||+|.+..... .......+.+|. .+++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999775 588999999865432 222334455554 457888999999999999999999999999999
Q ss_pred CCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccc
Q 005001 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (720)
Q Consensus 493 gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 572 (720)
|+|.+.+. ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 ~~L~~~l~----~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~ 152 (321)
T cd05603 81 GELFFHLQ----RERCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE-ET 152 (321)
T ss_pred CCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC-Cc
Confidence 99998886 246788999999999999999999998 99999999999999999999999999987532222 22
Q ss_pred cccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCC
Q 005001 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGM 652 (720)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (720)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+.... ..
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----------------~~~~i~~~~--~~ 214 (321)
T cd05603 153 TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQ----------------MYDNILHKP--LQ 214 (321)
T ss_pred cccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHH----------------HHHHHhcCC--CC
Confidence 234579999999999999999999999999999999999999997543211 111111111 12
Q ss_pred CChhHHHHHHHHHHHhcCCCCCCCCCHH
Q 005001 653 YPAKSLSRFADIIALCVQPEPEFRPPMS 680 (720)
Q Consensus 653 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ 680 (720)
.+...+..+.+++.+||+.||.+||++.
T Consensus 215 ~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 215 LPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 3445566788999999999999999864
No 203
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.4e-36 Score=311.19 Aligned_cols=248 Identities=28% Similarity=0.447 Sum_probs=201.1
Q ss_pred cCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEe-ecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCA-EHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~lV~e 488 (720)
.+|...+.||+|+||.||++... |..|++|.+.... ..+.+.+|+.++++++|+|++++++++. ..+..++|+|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 80 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc----hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEE
Confidence 46788899999999999999765 7889999886432 3456889999999999999999999754 4567899999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+++++|.++++.. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 81 YMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155 (256)
T ss_pred CCCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceecccc
Confidence 99999999998632 234588999999999999999999998 9999999999999999999999999998754332
Q ss_pred CccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
. ....++..|+|||++.+..++.++|||||||++|||++ |+.||....... ....+..
T Consensus 156 ~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~-----------------~~~~~~~ 214 (256)
T cd05082 156 Q----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-----------------VVPRVEK 214 (256)
T ss_pred C----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH-----------------HHHHHhc
Confidence 2 22345678999999999899999999999999999998 999986432211 1111111
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVR 688 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~ 688 (720)
......+...+..+.+++.+||+.+|++||++.++++.|++
T Consensus 215 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 215 GYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred CCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 11222334566788999999999999999999999999875
No 204
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.2e-37 Score=333.33 Aligned_cols=252 Identities=24% Similarity=0.352 Sum_probs=200.3
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
++|+..+.||+|+||.||+|... +++.||+|++..... .......+.+|+.++..++||||+++++.+.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36888899999999999999765 688999999964332 2334567788999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.++|+|||++.....
T Consensus 81 E~~~gg~L~~~l~----~~~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~ 153 (360)
T cd05627 81 EFLPGGDMMTLLM----KKDTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKK 153 (360)
T ss_pred eCCCCccHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCccccc
Confidence 9999999999986 246789999999999999999999999 999999999999999999999999999864422
Q ss_pred CCc----------------------------------cccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCC
Q 005001 568 TER----------------------------------QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGR 613 (720)
Q Consensus 568 ~~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~ 613 (720)
... ......+||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~ 233 (360)
T cd05627 154 AHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (360)
T ss_pred ccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCC
Confidence 100 0012347999999999999999999999999999999999999
Q ss_pred CCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCCCh--hHHHHHHHHHHHhcCCCCCCCCC---HHHHHHH
Q 005001 614 KPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPA--KSLSRFADIIALCVQPEPEFRPP---MSEVVQA 685 (720)
Q Consensus 614 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~li~~cl~~dP~~RPs---~~ell~~ 685 (720)
.||....+.... .++........++. ..+.++.+++.+|+ .||.+|++ +.|++++
T Consensus 234 ~Pf~~~~~~~~~----------------~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 234 PPFCSETPQETY----------------RKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCCCCCCHHHHH----------------HHHHcCCCceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcC
Confidence 999765432211 11111110111111 24567788998876 49999985 6777765
No 205
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2.7e-36 Score=310.00 Aligned_cols=252 Identities=28% Similarity=0.463 Sum_probs=195.6
Q ss_pred ceeccCCCcEEEEEEEc----CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEe-ecCeEEEEEEec
Q 005001 416 FLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCA-EHGQRLLVYEYV 490 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~lV~e~~ 490 (720)
+.||+|+||.||+|.+. ++..||+|++.... .......+.+|+.+++.++||||+++++++. .++..++|+||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 79 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT-DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYM 79 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC-CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecC
Confidence 36899999999999754 24579999885432 3344667889999999999999999999765 455689999999
Q ss_pred CCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCc
Q 005001 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER 570 (720)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 570 (720)
.+|+|.++++. .....++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.......
T Consensus 80 ~~~~L~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~ 153 (262)
T cd05058 80 KHGDLRNFIRS---ETHNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY 153 (262)
T ss_pred CCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCcc
Confidence 99999999863 234567888899999999999999998 999999999999999999999999999875533211
Q ss_pred c---ccccccccccccCccccccCCCcccchhhhHHHHHHHHHhC-CCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 571 Q---VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTG-RKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 571 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
. ......++..|+|||.+.+..++.++|||||||++|||++| ..||....... .. +.+.
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~---~~--------------~~~~ 216 (262)
T cd05058 154 YSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFD---IT--------------VYLL 216 (262)
T ss_pred eeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---HH--------------HHHh
Confidence 1 11123467789999999998999999999999999999995 55565332111 11 1111
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHH
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQ 691 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~ 691 (720)
.......+...+..+.+++.+||+.+|++||++.++++.|+++..
T Consensus 217 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 217 QGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred cCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 111112233456678999999999999999999999999988753
No 206
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=2.9e-37 Score=327.72 Aligned_cols=240 Identities=25% Similarity=0.346 Sum_probs=191.8
Q ss_pred ceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHH-HhhcCCCCCccccceEEeecCeEEEEEEecCC
Q 005001 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVS-NMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 492 (720)
+.||+|+||.||+|... +|+.||+|++..... .......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 36999999999999764 689999999865432 2223345555554 46778999999999999999999999999999
Q ss_pred CCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccc
Q 005001 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (720)
Q Consensus 493 gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 572 (720)
|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 ~~L~~~l~----~~~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~-~~ 152 (325)
T cd05604 81 GELFFHLQ----RERSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS-DT 152 (325)
T ss_pred CCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCC-CC
Confidence 99998886 346789999999999999999999999 99999999999999999999999999987532221 12
Q ss_pred cccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCC
Q 005001 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGM 652 (720)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (720)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..+...... .
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~----------------~~~~~~~~~--~ 214 (325)
T cd05604 153 TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEM----------------YDNILHKPL--V 214 (325)
T ss_pred cccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHH----------------HHHHHcCCc--c
Confidence 2345799999999999999999999999999999999999999975432111 111111111 1
Q ss_pred CChhHHHHHHHHHHHhcCCCCCCCCCHHH
Q 005001 653 YPAKSLSRFADIIALCVQPEPEFRPPMSE 681 (720)
Q Consensus 653 ~~~~~~~~l~~li~~cl~~dP~~RPs~~e 681 (720)
.+...+..+.+++++|++.||++||++.+
T Consensus 215 ~~~~~~~~~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 215 LRPGASLTAWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred CCCCCCHHHHHHHHHHhccCHHhcCCCCC
Confidence 22335567889999999999999998864
No 207
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.8e-36 Score=309.23 Aligned_cols=248 Identities=26% Similarity=0.422 Sum_probs=202.2
Q ss_pred ceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecCCCCH
Q 005001 416 FLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNL 495 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 495 (720)
++||+|+||.||+|...+++.|++|++...... .....+.+|++++++++|+||+++++++......++||||+++++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l 79 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSL 79 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcH
Confidence 369999999999998877999999998765432 4567789999999999999999999999999999999999999999
Q ss_pred HHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCcccc-c
Q 005001 496 HDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVS-T 574 (720)
Q Consensus 496 ~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~-~ 574 (720)
.++++. ....+++..+..++.+++.||+|||++ +++||||||+||+++.++.++|+|||++........... .
T Consensus 80 ~~~l~~---~~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (251)
T cd05041 80 LTFLRK---KKNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDG 153 (251)
T ss_pred HHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccc
Confidence 999863 234678999999999999999999999 999999999999999999999999999876542211111 1
Q ss_pred cccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCC
Q 005001 575 QMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMY 653 (720)
Q Consensus 575 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (720)
...++..|+|||.+.+..++.++|||||||++|||++ |..||......... ...........
T Consensus 154 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~-----------------~~~~~~~~~~~ 216 (251)
T cd05041 154 LKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTR-----------------ERIESGYRMPA 216 (251)
T ss_pred cCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHH-----------------HHHhcCCCCCC
Confidence 1234667999999998899999999999999999999 88888654332111 11111112223
Q ss_pred ChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 005001 654 PAKSLSRFADIIALCVQPEPEFRPPMSEVVQALV 687 (720)
Q Consensus 654 ~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~ 687 (720)
+...+..+.+++.+||+.+|.+||++.|+++.|.
T Consensus 217 ~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 217 PQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred CccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 4456678999999999999999999999999874
No 208
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.4e-36 Score=318.12 Aligned_cols=252 Identities=25% Similarity=0.389 Sum_probs=205.9
Q ss_pred HhcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
...+|+..+.||+|+||.||+|.. .+++.|++|.+..... .....+.+|+.+++.++|+||+++++.+...+..++|
T Consensus 18 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~--~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv 95 (296)
T cd06654 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (296)
T ss_pred cccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc--chHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEe
Confidence 345788899999999999999976 4688999998865432 2346688999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||+++++|.++++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++....
T Consensus 96 ~e~~~~~~L~~~~~-----~~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~ 167 (296)
T cd06654 96 MEYLAGGSLTDVVT-----ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167 (296)
T ss_pred ecccCCCCHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhcc
Confidence 99999999999986 34678999999999999999999999 99999999999999999999999999987653
Q ss_pred CCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
.... ......|++.|+|||.+.+..++.++|||||||++|||++|+.||....+.... .. ....
T Consensus 168 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~--~~-------------~~~~ 231 (296)
T cd06654 168 PEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL--YL-------------IATN 231 (296)
T ss_pred cccc-ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhH--HH-------------HhcC
Confidence 3221 123346889999999999988999999999999999999999999754431111 00 0011
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.......+...+..+.+++.+||..||++||++.+++++
T Consensus 232 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 232 GTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred CCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 111112234456778899999999999999999999975
No 209
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=9.7e-37 Score=328.97 Aligned_cols=266 Identities=21% Similarity=0.264 Sum_probs=202.0
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec------
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH------ 480 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 480 (720)
..++|+..+.||+|+||.||+|... .++.||||++............+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 3578999999999999999999764 588999999976544445566788999999999999999999987543
Q ss_pred CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccC
Q 005001 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (720)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 560 (720)
...++||||+++ +|.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG 171 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 171 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHH------hcCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCC
Confidence 357999999975 7877774 3578899999999999999999999 99999999999999999999999999
Q ss_pred CCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHH-Hh-hccccccH
Q 005001 561 LAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLV-RW-ATPQLHDI 638 (720)
Q Consensus 561 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~-~~-~~~~~~~~ 638 (720)
+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+ .. ..+.....
T Consensus 172 ~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 249 (364)
T cd07875 172 LARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM 249 (364)
T ss_pred CccccCCCC--cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 997653321 223457899999999999999999999999999999999999999765432221111 00 00000000
Q ss_pred HH----HHhhcc--ccc----------------CCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 639 DA----LAKMVD--PAL----------------NGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 639 ~~----~~~~~~--~~~----------------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.. ...... +.. ...........+.+++.+||+.||.+|||+.|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00 000000 000 000011123568899999999999999999999986
No 210
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.9e-36 Score=313.53 Aligned_cols=258 Identities=25% Similarity=0.394 Sum_probs=206.6
Q ss_pred cCCCccceeccCCCcEEEEEEEc------CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (720)
++|+..+.||+|+||.||+|..+ +.+.|++|.+.... .......+.+|++++++++|+||+++++++.+.+..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 83 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK-DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPH 83 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc-chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcc
Confidence 56888899999999999999764 24678888886432 223456788999999999999999999999998999
Q ss_pred EEEEEecCCCCHHHHhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcc
Q 005001 484 LLVYEYVGNGNLHDMLHFADDS-----SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSD 558 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~~-----~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~D 558 (720)
++||||+++|+|.++++..... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++|
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~ 160 (275)
T cd05046 84 YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSL 160 (275)
T ss_pred eEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEcc
Confidence 9999999999999999743311 12689999999999999999999999 999999999999999999999999
Q ss_pred cCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhcccccc
Q 005001 559 CGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHD 637 (720)
Q Consensus 559 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 637 (720)
||++...............++..|+|||.+.+..++.++||||||+++|+|++ |..||.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~-------------- 226 (275)
T cd05046 161 LSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE-------------- 226 (275)
T ss_pred cccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH--------------
Confidence 99986543332223334467788999999998889999999999999999999 788986432211
Q ss_pred HHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 005001 638 IDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALV 687 (720)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~ 687 (720)
..............+...+..+.+++.+||+.+|++||++.|+++.|.
T Consensus 227 --~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 227 --VLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred --HHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 111111111122233456678999999999999999999999999874
No 211
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=9.5e-37 Score=321.49 Aligned_cols=267 Identities=21% Similarity=0.319 Sum_probs=202.5
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
++|...+.||+|+||.||+|... +++.||+|.++.... ......+.+|+.++++++||||+++++++..++..++|||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 84 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFE 84 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc-CCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEe
Confidence 56888999999999999999765 578899999865432 2233457789999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+++ +|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 85 ~~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 157 (309)
T cd07872 85 YLDK-DLKQYMDD---CGNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVP 157 (309)
T ss_pred CCCC-CHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCC
Confidence 9975 88887753 245688999999999999999999999 9999999999999999999999999998754332
Q ss_pred CccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhh--cccc------ccHH
Q 005001 569 ERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWA--TPQL------HDID 639 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~--~~~~------~~~~ 639 (720)
.. ......+|+.|+|||.+.+ ..++.++|||||||++|||+||+.||...........+... .+.. ....
T Consensus 158 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07872 158 TK-TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSND 236 (309)
T ss_pred cc-ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchh
Confidence 21 1223468899999999865 45899999999999999999999999876543322222111 0000 0000
Q ss_pred HHHhhcccccCC----CCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 640 ALAKMVDPALNG----MYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 640 ~~~~~~~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.......+.... ......+.++.+++.+||+.||++|||+.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 237 EFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred hhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 000000000000 0011245678899999999999999999999975
No 212
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.9e-36 Score=310.20 Aligned_cols=252 Identities=25% Similarity=0.391 Sum_probs=205.1
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEee-cCeEEEEEE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE-HGQRLLVYE 488 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lV~e 488 (720)
.|+..+.||+|++|.||++... +++.||+|++..........+.+.+|++++++++|+|++++++.+.. ....++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4788899999999999999765 57889999997655455556778899999999999999999988764 446799999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+++++|.+++... ....+++.++..++.|++.|+++||+. +++||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~l~~~l~~~--~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 81 FCEGGDLYHKLKEQ--KGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ 155 (257)
T ss_pred ccCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEeccc
Confidence 99999999998732 245689999999999999999999999 9999999999999999999999999998765432
Q ss_pred CccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccc
Q 005001 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPA 648 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (720)
.. ......|++.|+|||++.+..++.++||||||+++|||++|+.||........ ...... .
T Consensus 156 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~----------------~~~~~~-~ 217 (257)
T cd08223 156 CD-MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSL----------------VYRIIE-G 217 (257)
T ss_pred CC-ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH----------------HHHHHh-c
Confidence 22 22345689999999999999999999999999999999999999975332110 001111 1
Q ss_pred cCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 649 LNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 649 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.....+...+..+.+++.+||+.||++||++.+++++
T Consensus 218 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 218 KLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred CCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 1112334566789999999999999999999999864
No 213
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.3e-36 Score=316.55 Aligned_cols=253 Identities=25% Similarity=0.360 Sum_probs=203.0
Q ss_pred CCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccCh-HHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 412 FSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL-QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 412 y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
|+..+.||+|+||+||+|.+. +++.||+|.+....... .....+.+|+++++.++|+||+.+.+++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 667789999999999999764 68899999986543322 2345578899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
+++++|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05632 82 MNGGDLKFHIYNM--GNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE 156 (285)
T ss_pred ccCccHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCCC
Confidence 9999999888632 234699999999999999999999999 99999999999999999999999999987654322
Q ss_pred ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccccc
Q 005001 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPAL 649 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (720)
. .....|+..|+|||.+.+..++.++|+|||||++|||++|..||........... ..+.+.. .
T Consensus 157 ~--~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~-------------~~~~~~~-~ 220 (285)
T cd05632 157 S--IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREE-------------VDRRVLE-T 220 (285)
T ss_pred c--ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH-------------HHHhhhc-c
Confidence 1 1235789999999999999999999999999999999999999976433211111 1111110 0
Q ss_pred CCCCChhHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHH
Q 005001 650 NGMYPAKSLSRFADIIALCVQPEPEFRPP-----MSEVVQA 685 (720)
Q Consensus 650 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~ell~~ 685 (720)
...++...+..+.+|+..||+.||++||+ +.+++++
T Consensus 221 ~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 221 EEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred ccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 11233445667889999999999999999 6677664
No 214
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2.1e-36 Score=314.00 Aligned_cols=252 Identities=23% Similarity=0.401 Sum_probs=200.3
Q ss_pred cCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
++|+..+.||+|+||.||+|.+ .+++.||+|.+.... .......+.+|+.++++++||||+++++++...+..++|||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI-TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTE 79 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC-ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEe
Confidence 3577888999999999999976 468899999986442 33445678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+++++|..+ ..+++..+..++.|++.||.|||+. +|+|+||||+||+++.++.++|+|||++......
T Consensus 80 ~~~~~~l~~~--------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~ 148 (279)
T cd06619 80 FMDGGSLDVY--------RKIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS 148 (279)
T ss_pred cCCCCChHHh--------hcCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecccc
Confidence 9999999654 2467888899999999999999999 9999999999999999999999999998765332
Q ss_pred CccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccc
Q 005001 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPA 648 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (720)
......||..|+|||++.+..++.++||||||+++|+|++|+.||.......... ..........+..
T Consensus 149 ---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~---------~~~~~~~~~~~~~ 216 (279)
T cd06619 149 ---IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSL---------MPLQLLQCIVDED 216 (279)
T ss_pred ---cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccccc---------chHHHHHHHhccC
Confidence 2233578999999999999999999999999999999999999997533211110 0001111111111
Q ss_pred cCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 649 LNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 649 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.........+.++.+++.+||+.||++||+++|++++
T Consensus 217 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 217 PPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred CCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 1111122345678899999999999999999999876
No 215
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=9.5e-37 Score=327.95 Aligned_cols=266 Identities=21% Similarity=0.272 Sum_probs=202.5
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec------
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH------ 480 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 480 (720)
..++|+..+.||+|+||.||+|... .++.||+|++............+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4578999999999999999999764 688999999976554555567788999999999999999999987543
Q ss_pred CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccC
Q 005001 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (720)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 560 (720)
...++||||+++ +|.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg 164 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 164 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHh------hcCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCc
Confidence 357999999975 6777664 3578899999999999999999999 99999999999999999999999999
Q ss_pred CCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhh-HHH-hhccccccH
Q 005001 561 LAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQS-LVR-WATPQLHDI 638 (720)
Q Consensus 561 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~-~~~-~~~~~~~~~ 638 (720)
+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+........ .+. ...+.....
T Consensus 165 ~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (355)
T cd07874 165 LARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 242 (355)
T ss_pred ccccCCCc--cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 99765332 12234578999999999999999999999999999999999999997654321111 000 000000000
Q ss_pred ----HHHHhhccc---------------cc---CCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 639 ----DALAKMVDP---------------AL---NGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 639 ----~~~~~~~~~---------------~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
......... .. ....+......+.+++.+||+.||++|||+.|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 243 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 000000000 00 000112234578899999999999999999999987
No 216
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.3e-36 Score=314.27 Aligned_cols=254 Identities=25% Similarity=0.432 Sum_probs=201.0
Q ss_pred HHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEeec----
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEH---- 480 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~---- 480 (720)
.+.+.|+..+.||+|+||.||+|... +++.||+|.+.... .....+.+|+.++.++ +|+||+++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 79 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC---ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCC
Confidence 45677888999999999999999765 57889999986432 2345678889998888 799999999998653
Q ss_pred --CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcc
Q 005001 481 --GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSD 558 (720)
Q Consensus 481 --~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~D 558 (720)
...++||||+++++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.++|+|
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~D 154 (272)
T cd06637 80 MDDQLWLVMEFCGAGSVTDLIKNT--KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVD 154 (272)
T ss_pred CCcEEEEEEEcCCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEcc
Confidence 4689999999999999998742 235689999999999999999999999 999999999999999999999999
Q ss_pred cCCCccCCCCCccccccccccccccCccccc-----cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcc
Q 005001 559 CGLAALTPNTERQVSTQMVGAFGYSAPEFAL-----SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATP 633 (720)
Q Consensus 559 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~ 633 (720)
||++....... .......|+..|+|||++. +..++.++|||||||++|||++|+.||....+......
T Consensus 155 fg~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~------ 227 (272)
T cd06637 155 FGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL------ 227 (272)
T ss_pred CCCceeccccc-ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHH------
Confidence 99987653322 1223457899999999986 34578899999999999999999999965432111100
Q ss_pred ccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 634 QLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
..........+...+..+.+++.+||..||.+||++.+++++
T Consensus 228 ----------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 228 ----------IPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred ----------HhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 000111111223355678999999999999999999999864
No 217
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1e-36 Score=317.88 Aligned_cols=267 Identities=23% Similarity=0.312 Sum_probs=195.4
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhc---CCCCCccccceEEee-----cC
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR---LRHPNIVTLAGYCAE-----HG 481 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~---l~h~niv~l~~~~~~-----~~ 481 (720)
+|+..+.||+|+||.||+|... +++.||+|.+............+.+|+.+++. ++||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4788899999999999999765 68899999987543222223344556665554 479999999998754 34
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCC
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 561 (720)
..++||||+.+ +|.++++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~ 154 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKV--PPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGL 154 (288)
T ss_pred eEEEEEccccc-CHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCc
Confidence 57999999975 898888632 234589999999999999999999999 999999999999999999999999999
Q ss_pred CccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhh-HHHhh-ccccccHH
Q 005001 562 AALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQS-LVRWA-TPQLHDID 639 (720)
Q Consensus 562 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~-~~~~~-~~~~~~~~ 639 (720)
+....... ......||..|+|||++.+..++.++||||+||++|||++|+.||.......... ..... .+......
T Consensus 155 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07863 155 ARIYSCQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 232 (288)
T ss_pred cccccCcc--cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCc
Confidence 97654322 1233568999999999999999999999999999999999999997654322211 11111 00000000
Q ss_pred HHHhhcccccC-------CCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 640 ALAKMVDPALN-------GMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 640 ~~~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
........... .......+..+.+++.+||+.||++||++.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 233 RDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred ccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000000000 00112345678899999999999999999999864
No 218
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=2.2e-36 Score=311.28 Aligned_cols=252 Identities=24% Similarity=0.368 Sum_probs=204.1
Q ss_pred CCCccceeccCCCcEEEEEEEcCCcEEEEEEcccccc----ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAAL----SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
+|...+.||+|+||.||+|...+++.+|+|.+..... .......+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 4778889999999999999888899999998864322 223345688999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
+||+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+|+||+|+||+++.++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 153 (265)
T cd06631 81 MEFVPGGSISSILNR----FGPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLA 153 (265)
T ss_pred EecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhh
Confidence 999999999999963 35678999999999999999999999 99999999999999999999999999987543
Q ss_pred CCC-----ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHH
Q 005001 567 NTE-----RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDAL 641 (720)
Q Consensus 567 ~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (720)
... ........|+..|+|||++.+..++.++|||||||++|||++|+.||...........+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~------------- 220 (265)
T cd06631 154 WVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYI------------- 220 (265)
T ss_pred hccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHh-------------
Confidence 211 11123356899999999999988999999999999999999999999754321111000
Q ss_pred HhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 005001 642 AKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQ 684 (720)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~ 684 (720)
.. ........+...+..+.+++++||+.+|++||++.++++
T Consensus 221 ~~--~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 221 GA--HRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred hh--ccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00 001111233446677899999999999999999999885
No 219
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=4.5e-36 Score=311.17 Aligned_cols=249 Identities=24% Similarity=0.426 Sum_probs=206.8
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
..|+..+.||+|+||.||+|.+. +++.||+|.+.... .......+.+|+.+++.++||||+++++++.+....++|||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE-AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIME 82 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc-cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEe
Confidence 35777889999999999999765 58899999886443 23456778899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+++++|.++++ ...+++.++..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~i~-----~~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06640 83 YLGGGSALDLLR-----AGPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 154 (277)
T ss_pred cCCCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCC
Confidence 999999999886 35688999999999999999999998 9999999999999999999999999998765432
Q ss_pred CccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccc
Q 005001 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPA 648 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (720)
. .......++..|+|||.+.+..++.++|+|||||++|||++|..||....+..... .....
T Consensus 155 ~-~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~-----------------~~~~~ 216 (277)
T cd06640 155 Q-IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLF-----------------LIPKN 216 (277)
T ss_pred c-cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhh-----------------hhhcC
Confidence 2 12233468889999999999889999999999999999999999997544321110 01111
Q ss_pred cCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 649 LNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 649 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.....+...+..+.+++.+||+.+|++||++.+++++
T Consensus 217 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 217 NPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 1223344567789999999999999999999999877
No 220
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=4.3e-36 Score=311.66 Aligned_cols=257 Identities=25% Similarity=0.420 Sum_probs=207.4
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCc----EEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGK----IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (720)
.+|+..+.||+|+||.||+|.+. +|+ .+|+|...... .......+.+|+..+++++||||+++++++.. +..+
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 84 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET-SPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQ 84 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceE
Confidence 46788889999999999999764 233 58899886543 24455678899999999999999999999887 7889
Q ss_pred EEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
+|+||+++|+|.++++. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.
T Consensus 85 ~v~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~ 158 (279)
T cd05057 85 LITQLMPLGCLLDYVRN---HKDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (279)
T ss_pred EEEecCCCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCccccc
Confidence 99999999999999873 234689999999999999999999998 999999999999999999999999999986
Q ss_pred CCCCCcccc-ccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 565 TPNTERQVS-TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 565 ~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
......... ....++..|+|||.+....++.++||||||+++||+++ |+.||....... +.
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-----------------~~ 221 (279)
T cd05057 159 LDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE-----------------IP 221 (279)
T ss_pred ccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH-----------------HH
Confidence 653322211 11224568999999988889999999999999999999 999997643211 11
Q ss_pred hhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHH
Q 005001 643 KMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQ 691 (720)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~ 691 (720)
..+........+..++..+.+++.+||..||.+||++.++++.|.++.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 222 DLLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 1111111223344455678899999999999999999999999998855
No 221
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.6e-36 Score=310.29 Aligned_cols=254 Identities=27% Similarity=0.399 Sum_probs=209.6
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEee--cCeEEEEE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE--HGQRLLVY 487 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lV~ 487 (720)
+|+..+.||+|+||.||+|... +++.||+|.+..........+.+.+|++++++++||||+++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4778889999999999999654 67899999987665566667788999999999999999999998754 45679999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH-----hcCCCCcEEecCCCCCEEeCCCCceEEcccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLH-----EVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH-----~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a 562 (720)
||+++++|.+++.........+++..+..++.|++.||+||| +. +++|+||+|+||+++.++.+||+|||++
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEeccccc
Confidence 999999999999765445678999999999999999999999 66 9999999999999999999999999998
Q ss_pred ccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 563 ALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
........ ......|++.|+|||.+.+..++.++|+||||+++|+|++|+.||....... +.
T Consensus 158 ~~~~~~~~-~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-----------------~~ 219 (265)
T cd08217 158 KILGHDSS-FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQ-----------------LA 219 (265)
T ss_pred ccccCCcc-cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHH-----------------HH
Confidence 87654332 1233568999999999999889999999999999999999999997643211 11
Q ss_pred hhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 643 KMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+.+........+...+..+.+++.+||+.+|++||++++|+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 220 SKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred HHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 1111111223344566789999999999999999999999874
No 222
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.6e-36 Score=316.01 Aligned_cols=265 Identities=25% Similarity=0.361 Sum_probs=207.0
Q ss_pred cchhcHHHHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEE
Q 005001 400 YTVASLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYC 477 (720)
Q Consensus 400 ~~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 477 (720)
..+..+..+.++|+..+.||+|+||.||+|... +++.+|+|.+.... .....+.+|+.+++.+ +||||+++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 84 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH---DIDEEIEAEYNILKALSDHPNVVKFYGMY 84 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc---chHHHHHHHHHHHHHHhcCCCeeeeeeee
Confidence 445667778899999999999999999999764 57899999875422 2235577888888888 799999999987
Q ss_pred e-----ecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCC
Q 005001 478 A-----EHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL 552 (720)
Q Consensus 478 ~-----~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~ 552 (720)
. ..+..++||||+++++|.++++........+++..+..++.|++.||.|||+. +++||||||+||+++.++
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~ 161 (286)
T cd06638 85 YKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEG 161 (286)
T ss_pred eecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCC
Confidence 4 34568999999999999998864433456789999999999999999999999 999999999999999999
Q ss_pred ceEEcccCCCccCCCCCccccccccccccccCcccccc-----CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhH
Q 005001 553 NPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALS-----GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSL 627 (720)
Q Consensus 553 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~ 627 (720)
.++|+|||++....... .......|++.|+|||++.. ..++.++||||+||++|||++|+.||....+....
T Consensus 162 ~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~-- 238 (286)
T cd06638 162 GVKLVDFGVSAQLTSTR-LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRAL-- 238 (286)
T ss_pred CEEEccCCceeecccCC-CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHH--
Confidence 99999999987654322 12233468999999999853 45788999999999999999999999754321111
Q ss_pred HHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 628 VRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
.. ..+.. ......+...+..+.+++.+||+.||++||++.|++++.
T Consensus 239 ~~-----------~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 239 FK-----------IPRNP--PPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred hh-----------ccccC--CCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 00 00000 001112233456788999999999999999999999764
No 223
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=3.4e-36 Score=310.65 Aligned_cols=254 Identities=26% Similarity=0.356 Sum_probs=193.8
Q ss_pred eeccCCCcEEEEEEEcC---CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecCCC
Q 005001 417 LIGEGSLGRVYRAEFAN---GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNG 493 (720)
Q Consensus 417 ~lG~G~fg~Vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 493 (720)
.||+|+||.||+|...+ +..+|+|+++... .......+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA-SVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 58999999999997643 4578999887554 2344567889999999999999999999999989999999999999
Q ss_pred CHHHHhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccc
Q 005001 494 NLHDMLHFADD-SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (720)
Q Consensus 494 sL~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 572 (720)
+|.++++.... .....++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++..........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 99999975332 223567788889999999999999999 99999999999999999999999999986543322111
Q ss_pred -cccccccccccCccccccC-------CCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHh
Q 005001 573 -STQMVGAFGYSAPEFALSG-------IYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAK 643 (720)
Q Consensus 573 -~~~~~gt~~y~aPE~~~~~-------~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (720)
.....|+..|+|||++.+. .++.++||||||+++|||++ |+.||....+........ . ....+
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~--~------~~~~~ 229 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTV--R------EQQLK 229 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHh--h------cccCC
Confidence 2234578899999998642 35789999999999999997 999997543321111000 0 00000
Q ss_pred hcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 005001 644 MVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALV 687 (720)
Q Consensus 644 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~ 687 (720)
... .......+..+.+++..|| .+|++||+++||++.|+
T Consensus 230 ~~~----~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 230 LPK----PRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCC----CccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 111 1112234556889999999 68999999999998874
No 224
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.6e-36 Score=316.39 Aligned_cols=269 Identities=27% Similarity=0.382 Sum_probs=207.6
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
++|+..+.||+|+||.||+|.+. +++.||+|+++...........+.+|++++++++|+||+++++++...+..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36888999999999999999776 58899999987654444456778999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|++++.+..+.. ....+++.++..++.|++.||+|||+. +++||||+|+||++++++.+||+|||++......
T Consensus 81 ~~~~~~l~~~~~----~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 81 YVERTLLELLEA----SPGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRAR 153 (288)
T ss_pred cCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence 999877766554 245689999999999999999999999 9999999999999999999999999998876554
Q ss_pred CccccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcccccc--------HH
Q 005001 569 ERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHD--------ID 639 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~--------~~ 639 (720)
.........++..|+|||++.+. .++.++||||||+++|+|++|+.||..................... ..
T Consensus 154 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07833 154 PASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNP 233 (288)
T ss_pred ccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCc
Confidence 43233446788999999999888 7899999999999999999999999764432211111100000000 00
Q ss_pred HHHh--hccc----ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 640 ALAK--MVDP----ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 640 ~~~~--~~~~----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.... .... .....++...+.++.+++++||..+|++||++++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 234 RFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred cccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 0000 0000 00011233346789999999999999999999998853
No 225
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7e-38 Score=325.93 Aligned_cols=251 Identities=25% Similarity=0.443 Sum_probs=209.0
Q ss_pred cCCCccceeccCCCcEEEEEEEcCCcE-EEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFANGKI-MAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~-vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
+-|.++..||.|+||.||+|..++... .|.|.+.. .+.++...|+-|+++|+.++||+||++++.|.-.+.++|+.|
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet--kseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliE 109 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET--KSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIE 109 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcc--cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEe
Confidence 346677789999999999998776544 45566643 245677889999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
||.||-++..+- .-+..+++.++..+++|++.||.|||++ +|||||||+.|||++-+|.++|+|||.+.....
T Consensus 110 FC~GGAVDaiml---EL~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~- 182 (1187)
T KOG0579|consen 110 FCGGGAVDAIML---ELGRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS- 182 (1187)
T ss_pred ecCCchHhHHHH---HhccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchh-
Confidence 999999998875 2467899999999999999999999999 999999999999999999999999999864432
Q ss_pred CccccccccccccccCccccc-----cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHh
Q 005001 569 ERQVSTQMVGAFGYSAPEFAL-----SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAK 643 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (720)
.......+.|||+|||||+.. ..+|+.++||||||++|.||..+.+|-...++. ..+.+
T Consensus 183 t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpM----------------RVllK 246 (1187)
T KOG0579|consen 183 TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPM----------------RVLLK 246 (1187)
T ss_pred HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchH----------------HHHHH
Confidence 233456789999999999875 467999999999999999999999998755443 22333
Q ss_pred hccc-ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 644 MVDP-ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 644 ~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+... ......|......+.+++.+||.+||..||++.+++++
T Consensus 247 iaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 247 IAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred HhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 3222 12334577888899999999999999999999999875
No 226
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-37 Score=325.68 Aligned_cols=245 Identities=27% Similarity=0.410 Sum_probs=204.2
Q ss_pred eeccCCCcEEEEEEEcC-CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecCCCCH
Q 005001 417 LIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNL 495 (720)
Q Consensus 417 ~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 495 (720)
+||+|.||+||-|++.+ ...+|||.+.... .+..+-+.+|+...++++|.|||+++|.+.+++..-|.||-++||+|
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekd--sr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSL 659 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKD--SREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSL 659 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeeccccc--chhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcH
Confidence 79999999999997654 5678999986543 34456688999999999999999999999999999999999999999
Q ss_pred HHHhhhccCCCCCC--CHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC-CCceEEcccCCCccCCCCCccc
Q 005001 496 HDMLHFADDSSKNL--TWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD-ELNPHLSDCGLAALTPNTERQV 572 (720)
Q Consensus 496 ~~~l~~~~~~~~~~--~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~~~~~~ 572 (720)
.++++. .-+++ .+.+..-+.+||++||.|||++ .|||||||-+|||++. .|.+||+|||-++++..-. ..
T Consensus 660 SsLLrs---kWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgin-P~ 732 (1226)
T KOG4279|consen 660 SSLLRS---KWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGIN-PC 732 (1226)
T ss_pred HHHHHh---ccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccCC-cc
Confidence 999973 34556 7888888999999999999999 9999999999999975 7899999999998775433 33
Q ss_pred cccccccccccCccccccCC--CcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccC
Q 005001 573 STQMVGAFGYSAPEFALSGI--YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALN 650 (720)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (720)
...+.||.-|||||++..++ |+.++|||||||++.||.||++||......... +-++-.-+..
T Consensus 733 TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA---------------MFkVGmyKvH 797 (1226)
T KOG4279|consen 733 TETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA---------------MFKVGMYKVH 797 (1226)
T ss_pred ccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh---------------hhhhcceecC
Confidence 45678999999999998765 889999999999999999999999754432111 1111111223
Q ss_pred CCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 651 GMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 651 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
...|.+.+.+...+|.+|+.+||.+||+++++++.
T Consensus 798 P~iPeelsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 798 PPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred CCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 45678889999999999999999999999999964
No 227
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.6e-36 Score=315.80 Aligned_cols=269 Identities=22% Similarity=0.299 Sum_probs=202.5
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
+|+..+.||+|+||.||+|... +++.||+|++............+.+|+.++++++||||+++++++..++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4778889999999999999775 688999999875443333446778899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
++ ++|.++++... ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 81 LS-MDLKKYLDSLP-KGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred CC-CCHHHHHhcCC-CCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence 97 58988886432 236789999999999999999999999 99999999999999999999999999987553322
Q ss_pred ccccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhH-HH-hhcc------ccccHHH
Q 005001 570 RQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSL-VR-WATP------QLHDIDA 640 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~-~~-~~~~------~~~~~~~ 640 (720)
.......+++.|+|||.+.+. .++.++|||||||++|||+||+.||........... .. +..+ .......
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (285)
T cd07861 156 -RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPD 234 (285)
T ss_pred -ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHH
Confidence 112234578899999988764 478999999999999999999999976543221110 00 0000 0000011
Q ss_pred HHhhcccccC---CCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 641 LAKMVDPALN---GMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 641 ~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.......... .......+.++.++|++||+.||++||++.+++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 235 YKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred HHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 1111100000 00112245678899999999999999999999864
No 228
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2.5e-36 Score=309.01 Aligned_cols=251 Identities=27% Similarity=0.469 Sum_probs=206.4
Q ss_pred hcCCCccceeccCCCcEEEEEEEcC-CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.++|+..+.||+|+||.||+|...+ ++.|++|.+.... ....+.+|++++++++||||+++++++...+..++++
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~ 77 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE----DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVM 77 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH----HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEE
Confidence 3678889999999999999998764 7899999986432 2677899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++++|.+++.. ....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 78 e~~~~~~L~~~l~~---~~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~ 151 (256)
T cd06612 78 EYCGAGSVSDIMKI---TNKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTD 151 (256)
T ss_pred ecCCCCcHHHHHHh---CccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhccc
Confidence 99999999999863 246789999999999999999999999 999999999999999999999999999876644
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
... ......|+..|+|||++.+..++.++||||||+++|+|++|+.||....+......+ .. ..
T Consensus 152 ~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~-------------~~--~~ 215 (256)
T cd06612 152 TMA-KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMI-------------PN--KP 215 (256)
T ss_pred Ccc-ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhh-------------cc--CC
Confidence 321 223345888999999999999999999999999999999999999754332111000 00 00
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
......+...+..+.+++.+||+.||++||+++|++++
T Consensus 216 ~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 216 PPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred CCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 11111233455678999999999999999999999863
No 229
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1e-36 Score=326.10 Aligned_cols=265 Identities=21% Similarity=0.308 Sum_probs=200.8
Q ss_pred HHhcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec-----
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH----- 480 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 480 (720)
...++|...+.||+|+||.||+|.. .+++.||+|++............+.+|+.+++.++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 3457899999999999999999976 4688999999976544444456678899999999999999999987543
Q ss_pred -CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEccc
Q 005001 481 -GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDC 559 (720)
Q Consensus 481 -~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Df 559 (720)
...++++|++ +++|.++++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Df 162 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVK-----CQKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDF 162 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCC
Confidence 3568999988 679988875 45799999999999999999999999 9999999999999999999999999
Q ss_pred CCCccCCCCCccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHH-Hhh-ccccc
Q 005001 560 GLAALTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLV-RWA-TPQLH 636 (720)
Q Consensus 560 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~-~~~-~~~~~ 636 (720)
|+++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+ ... .+...
T Consensus 163 g~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 238 (343)
T cd07878 163 GLARQADDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPE 238 (343)
T ss_pred ccceecCCC----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 999765432 234578999999999977 56899999999999999999999999765432211111 000 00000
Q ss_pred c-----HHHHHhhcccccCCCCC-------hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 637 D-----IDALAKMVDPALNGMYP-------AKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 637 ~-----~~~~~~~~~~~~~~~~~-------~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
. .....+... ....... ......+.+|+.+||+.||++|||+.|++++
T Consensus 239 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 239 VLKKISSEHARKYIQ-SLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HHHhcchhhHHHHhh-ccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 000000000 0000000 1123457899999999999999999999976
No 230
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-37 Score=319.19 Aligned_cols=258 Identities=22% Similarity=0.324 Sum_probs=211.4
Q ss_pred HHHHhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeE
Q 005001 405 LQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQR 483 (720)
Q Consensus 405 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 483 (720)
+......|++.+.||+||.+.||++...+.+.||+|++.......+....|..|+..|.++ +|.+|+++++|-..++.+
T Consensus 356 i~Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~l 435 (677)
T KOG0596|consen 356 IKVKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYL 435 (677)
T ss_pred EEECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceE
Confidence 3344567999999999999999999998899999999988888888889999999999999 699999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
|+||||= .-+|..+|+.. ........++.+..|++.++.++|.+ ||||.||||.|+|+-. |.+||+|||+|.
T Consensus 436 YmvmE~G-d~DL~kiL~k~---~~~~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVk-G~LKLIDFGIA~ 507 (677)
T KOG0596|consen 436 YMVMECG-DIDLNKILKKK---KSIDPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVK-GRLKLIDFGIAN 507 (677)
T ss_pred EEEeecc-cccHHHHHHhc---cCCCchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEe-eeEEeeeechhc
Confidence 9999975 45999999742 23333337888999999999999999 9999999999999965 589999999998
Q ss_pred cCCCCCcc-ccccccccccccCccccccCC-----------CcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhh
Q 005001 564 LTPNTERQ-VSTQMVGAFGYSAPEFALSGI-----------YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWA 631 (720)
Q Consensus 564 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~-----------~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~ 631 (720)
....+... .....+||+.||+||.+.... .++++||||+|||||+|+.|++||....
T Consensus 508 aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~----------- 576 (677)
T KOG0596|consen 508 AIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII----------- 576 (677)
T ss_pred ccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH-----------
Confidence 77654433 345568999999999986432 5688999999999999999999996321
Q ss_pred ccccccHHHHHhhcccccCCCCChhHH-HHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 632 TPQLHDIDALAKMVDPALNGMYPAKSL-SRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
..+..+..+.++.-.-.||.... .++.++|+.||..||.+||+..|+|++
T Consensus 577 ----n~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 577 ----NQIAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred ----HHHHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 12234445556544444443322 338999999999999999999999986
No 231
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=3.6e-36 Score=313.26 Aligned_cols=268 Identities=24% Similarity=0.353 Sum_probs=204.3
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
++|+..+.||+|+||.||+|... +|+.||+|++..........+.+.+|+.++++++||||+++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46888899999999999999876 58999999986543333334567899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+++++|..++. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~l~~~~~----~~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07847 81 YCDHTVLNELEK----NPRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGP 153 (286)
T ss_pred ccCccHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence 999988888765 245689999999999999999999998 9999999999999999999999999999866443
Q ss_pred CccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhh-ccccccHHHH-----
Q 005001 569 ERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWA-TPQLHDIDAL----- 641 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~----- 641 (720)
.. ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||.+.........+.-. ..........
T Consensus 154 ~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07847 154 GD-DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQ 232 (286)
T ss_pred cc-cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccc
Confidence 22 1223467889999999876 45789999999999999999999999865543222111100 0000000000
Q ss_pred --HhhcccccCCCCC-----hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 642 --AKMVDPALNGMYP-----AKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 642 --~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.....+......+ ...+..+.+++.+||+.||++||++.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 233 FFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred ccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 0000000000000 1235678899999999999999999999864
No 232
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=3.9e-36 Score=334.53 Aligned_cols=266 Identities=20% Similarity=0.267 Sum_probs=192.8
Q ss_pred HHHHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcC------CCCCccccceEE
Q 005001 405 LQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL------RHPNIVTLAGYC 477 (720)
Q Consensus 405 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~l~~~~ 477 (720)
+....++|++.+.||+|+||.||+|.+. .++.||||+++... .....+..|+++++.+ +|.+++.+++++
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP---KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch---hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 3445688999999999999999999764 57889999986432 1222334455555444 455688888888
Q ss_pred eec-CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEEecCCCCCEEeCCCC---
Q 005001 478 AEH-GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHE-VCLPSVVHRNFKSANILLDDEL--- 552 (720)
Q Consensus 478 ~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~-~~~~~iiH~Dlkp~NIll~~~~--- 552 (720)
... ++.++|||++ +++|.+++.. .+.+++..+..++.||+.||+|||+ . +||||||||+|||++.++
T Consensus 201 ~~~~~~~~iv~~~~-g~~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~~ 272 (467)
T PTZ00284 201 QNETGHMCIVMPKY-GPCLLDWIMK----HGPFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTVV 272 (467)
T ss_pred EcCCceEEEEEecc-CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCccc
Confidence 664 5789999988 6688888862 4678999999999999999999997 5 999999999999998765
Q ss_pred -------------ceEEcccCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCC
Q 005001 553 -------------NPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSS 619 (720)
Q Consensus 553 -------------~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~ 619 (720)
.+||+|||.+..... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 273 ~~~~~~~~~~~~~~vkl~DfG~~~~~~~----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~ 348 (467)
T PTZ00284 273 DPVTNRALPPDPCRVRICDLGGCCDERH----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTH 348 (467)
T ss_pred ccccccccCCCCceEEECCCCccccCcc----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 499999998754321 223467999999999999999999999999999999999999999876
Q ss_pred CCcchhhHHHhhccccccH-------HHHHhhcccc--cCCCC---------------ChhHHHHHHHHHHHhcCCCCCC
Q 005001 620 RPRSEQSLVRWATPQLHDI-------DALAKMVDPA--LNGMY---------------PAKSLSRFADIIALCVQPEPEF 675 (720)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~--~~~~~---------------~~~~~~~l~~li~~cl~~dP~~ 675 (720)
........+.......... .......... +.... .......+.+||.+||+.||++
T Consensus 349 ~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~ 428 (467)
T PTZ00284 349 DNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQK 428 (467)
T ss_pred ChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhh
Confidence 5432222221111000000 0000000000 00000 0012346789999999999999
Q ss_pred CCCHHHHHHH
Q 005001 676 RPPMSEVVQA 685 (720)
Q Consensus 676 RPs~~ell~~ 685 (720)
|||++|++++
T Consensus 429 R~ta~e~L~H 438 (467)
T PTZ00284 429 RLNARQMTTH 438 (467)
T ss_pred CCCHHHHhcC
Confidence 9999999976
No 233
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-37 Score=314.79 Aligned_cols=251 Identities=25% Similarity=0.360 Sum_probs=209.9
Q ss_pred HhcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccCh-HHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSL-QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
..+.|+.-++||+|+||+||-++. .+|+.||.|++.+..... ..+...+.|-+++.+++.+.||.+--+|+..+.+++
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LCl 262 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCL 262 (591)
T ss_pred cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEE
Confidence 346788889999999999999965 479999999997665533 334566889999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
|+..|.||+|.-+|... .+..++++.++-++.+|+.||++||.. +||+||+||+|||+|+.|+++|+|+|+|..+
T Consensus 263 VLtlMNGGDLkfHiyn~--g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei 337 (591)
T KOG0986|consen 263 VLTLMNGGDLKFHIYNH--GNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEI 337 (591)
T ss_pred EEEeecCCceeEEeecc--CCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEec
Confidence 99999999999888633 346899999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
+.... ..+.+||.+|||||++.++.|+...|+|||||++|||+.|+.||......... +.+.+++
T Consensus 338 ~~g~~--~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~-------------eEvdrr~ 402 (591)
T KOG0986|consen 338 PEGKP--IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKR-------------EEVDRRT 402 (591)
T ss_pred CCCCc--cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhH-------------HHHHHHH
Confidence 65433 34458999999999999999999999999999999999999999865543322 1222222
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCH
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPM 679 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 679 (720)
.. -...++...+++..++.+..|++||++|...
T Consensus 403 ~~-~~~ey~~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 403 LE-DPEEYSDKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred hc-chhhcccccCHHHHHHHHHHHccCHHHhccC
Confidence 11 1224566777888999999999999999743
No 234
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=3.2e-36 Score=313.25 Aligned_cols=255 Identities=29% Similarity=0.412 Sum_probs=198.7
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHH-hhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSN-MSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
++|+..+.||+|+||.||+|.+. +|+.||+|++....... ....+..|+.. ++..+||||+++++++..++..++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 79 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQ-EQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM 79 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcH-HHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence 46888899999999999999775 68999999987554333 23445556554 56679999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||++ |+|.++++........+++..+..++.|++.||+|||++. +++||||||+||+++.++.+||+|||++.....
T Consensus 80 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 80 EVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 9997 5898888754444567999999999999999999999853 899999999999999999999999999876533
Q ss_pred CCccccccccccccccCcccccc----CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHh
Q 005001 568 TERQVSTQMVGAFGYSAPEFALS----GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAK 643 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (720)
.. ......|+..|+|||.+.+ ..++.++|+|||||++|||++|+.||....... +.+..
T Consensus 157 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---------------~~~~~ 219 (283)
T cd06617 157 SV--AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPF---------------QQLKQ 219 (283)
T ss_pred cc--ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCH---------------HHHHH
Confidence 21 1223468899999998865 446889999999999999999999996432211 11111
Q ss_pred hcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 644 MVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 644 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
..............+.++.+++.+||..+|++||++.+++++
T Consensus 220 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 220 VVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred HHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111111111112345778999999999999999999999975
No 235
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.3e-36 Score=321.14 Aligned_cols=267 Identities=22% Similarity=0.321 Sum_probs=197.6
Q ss_pred ccceeccC--CCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEec
Q 005001 414 QEFLIGEG--SLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYV 490 (720)
Q Consensus 414 ~~~~lG~G--~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 490 (720)
..++||+| +|++||++.. .+|+.||+|++............+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 35689999 7889999966 47899999999765544445567788999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCc
Q 005001 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER 570 (720)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 570 (720)
++|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||+..........
T Consensus 82 ~~~~l~~~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 82 AYGSAKDLICTH--FMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred CCCcHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence 999999998632 234589999999999999999999999 999999999999999999999999986543221111
Q ss_pred c------ccccccccccccCcccccc--CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhh-HHHhhcccccc----
Q 005001 571 Q------VSTQMVGAFGYSAPEFALS--GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQS-LVRWATPQLHD---- 637 (720)
Q Consensus 571 ~------~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~-~~~~~~~~~~~---- 637 (720)
. ......++..|+|||++.+ ..++.++|||||||++|||++|+.||.......... ......+...+
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (327)
T cd08227 157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTI 236 (327)
T ss_pred cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccch
Confidence 0 1122356778999999976 458999999999999999999999997543211100 00000000000
Q ss_pred -HHHHH-----hhccc-----------------ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 638 -IDALA-----KMVDP-----------------ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 638 -~~~~~-----~~~~~-----------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.+... ...+. ..........+..+.+++.+||+.||++|||++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 237 PAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred hhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 00000 00000 00001122345678999999999999999999999975
No 236
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=4.1e-36 Score=310.01 Aligned_cols=257 Identities=25% Similarity=0.400 Sum_probs=205.0
Q ss_pred CCCccceeccCCCcEEEEEEEcC--CcEEEEEEccccc--------cChHHHHHHHHHHHHhhc-CCCCCccccceEEee
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFAN--GKIMAVKKIDNAA--------LSLQEEDNFLEAVSNMSR-LRHPNIVTLAGYCAE 479 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~~~~~~--------~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~ 479 (720)
.|+..+.||+|+||.||+|.... ++.+|+|.+.... ........+.+|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 37778899999999999998765 6889999875332 122334567788887765 799999999999999
Q ss_pred cCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEccc
Q 005001 480 HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDC 559 (720)
Q Consensus 480 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Df 559 (720)
.+..++||||+++++|.+++.........+++..++.++.|++.||.|||+.. +++|+||+|+||+++.++.++|+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHEEECCCCcEEEecc
Confidence 99999999999999999998654445567999999999999999999999631 8999999999999999999999999
Q ss_pred CCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHH
Q 005001 560 GLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDID 639 (720)
Q Consensus 560 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 639 (720)
|.+....... ......|+..|+|||.+.+..++.++||||||+++|||++|+.||........
T Consensus 159 g~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~--------------- 221 (269)
T cd08528 159 GLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSL--------------- 221 (269)
T ss_pred cceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHH---------------
Confidence 9997654432 22345689999999999998899999999999999999999999965432111
Q ss_pred HHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 005001 640 ALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALV 687 (720)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~ 687 (720)
.................+..+.+++.+||+.||++||++.|+..+++
T Consensus 222 -~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 222 -ATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred -HHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 11111111111111234567899999999999999999999998875
No 237
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=5e-36 Score=308.97 Aligned_cols=251 Identities=26% Similarity=0.418 Sum_probs=203.4
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccCh-------HHHHHHHHHHHHhhcCCCCCccccceEEeecCe
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL-------QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (720)
+|.....||+|+||.||+|... +++.||+|.+....... ...+.+.+|+.++++++||||+++++++...+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 4677789999999999999764 57899999886543221 123567889999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCC
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a 562 (720)
.++|+||+++++|.+++.. ...+++..+..++.|++.||+|||+. +++||||+|+||+++.++.++|+|||.+
T Consensus 81 ~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~ 153 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNN----YGAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGIS 153 (267)
T ss_pred cEEEEEecCCCCHHHHHHh----ccCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCC
Confidence 9999999999999999963 35688999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCc-----cccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcccccc
Q 005001 563 ALTPNTER-----QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHD 637 (720)
Q Consensus 563 ~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 637 (720)
+....... .......|+..|+|||.+.+..++.++|||||||++|+|++|+.||.......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-------------- 219 (267)
T cd06628 154 KKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ-------------- 219 (267)
T ss_pred cccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH--------------
Confidence 76642211 11123458899999999999899999999999999999999999997543211
Q ss_pred HHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 638 IDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
...+... ......+...+..+.+++++||+.||.+||++.+++++
T Consensus 220 --~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 220 --AIFKIGE-NASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred --HHHHHhc-cCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 1111111 11122344566788999999999999999999999863
No 238
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-37 Score=300.18 Aligned_cols=251 Identities=23% Similarity=0.338 Sum_probs=211.6
Q ss_pred hcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
-++|...++||+|.||.|-+++- .+++.||+|++++..+ ...+.+.-+.|-++++..+||.+..+.-.|..++++|+|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 46788899999999999999965 4799999999987765 455567778899999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||..||.|.-++. ....+++..++-+...|+.||.|||++ +||+||||.+|.|+|.+|++||+|||+++.-.
T Consensus 247 MeyanGGeLf~HLs----rer~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I 319 (516)
T KOG0690|consen 247 MEYANGGELFFHLS----RERVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEEI 319 (516)
T ss_pred EEEccCceEeeehh----hhhcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhcc
Confidence 99999999999886 357889999999999999999999999 99999999999999999999999999987543
Q ss_pred CCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
..+ .....++|||.|+|||++....|+.++|+|.+||++|||++|+.||...+....-.++ +.
T Consensus 320 ~~g-~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLI----------------l~ 382 (516)
T KOG0690|consen 320 KYG-DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELI----------------LM 382 (516)
T ss_pred ccc-ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHH----------------Hh
Confidence 332 3445689999999999999999999999999999999999999999865432211111 11
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRP-----PMSEVVQA 685 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~ell~~ 685 (720)
.. ..+|.....+...|+...|.+||.+|. +++||.++
T Consensus 383 ed--~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 383 ED--LKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred hh--ccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence 11 235666777888999999999999995 46666654
No 239
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=5.7e-36 Score=314.62 Aligned_cols=258 Identities=24% Similarity=0.407 Sum_probs=203.8
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCc----EEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGK----IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (720)
++|+..+.||+|+||.||+|.+. +|+ .||+|.+.... .......+.+|+.+++.++||||+++++++... ..+
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT-GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 56778889999999999999764 444 47888886443 233445688999999999999999999988654 567
Q ss_pred EEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
+++||+++|+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 85 ~v~e~~~~g~l~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~ 158 (303)
T cd05110 85 LVTQLMPHGCLLDYVHE---HKDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (303)
T ss_pred eeehhcCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEcccccccc
Confidence 99999999999999863 234688999999999999999999999 999999999999999999999999999986
Q ss_pred CCCCCccc-cccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 565 TPNTERQV-STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 565 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
........ .....++..|+|||.+.+..++.++|||||||++|||++ |+.||..........
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~---------------- 222 (303)
T cd05110 159 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPD---------------- 222 (303)
T ss_pred ccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH----------------
Confidence 64332221 122345778999999999999999999999999999998 999997543211111
Q ss_pred hhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHh
Q 005001 643 KMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQR 692 (720)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~ 692 (720)
.+........+..++..+.+++.+||..+|++||++.++++.|.++.+.
T Consensus 223 -~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 223 -LLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred -HHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 1111111122333556788999999999999999999999999887544
No 240
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=6.1e-36 Score=308.28 Aligned_cols=252 Identities=25% Similarity=0.360 Sum_probs=199.9
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc---ChHHHHHHHHHHHHhhcCCCCCccccceEEee--cCeE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL---SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE--HGQR 483 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~ 483 (720)
.+|...+.||+|+||.||+|... ++..|++|++..... .......+.+|+.++++++||||+++++++.. ....
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 46888999999999999999764 588999998864432 22344568889999999999999999998865 3577
Q ss_pred EEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
++++||+++++|.+++.. ...+++.....++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++.
T Consensus 82 ~l~~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~ 154 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKA----YGALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASK 154 (266)
T ss_pred EEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCcc
Confidence 899999999999999862 35688999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCCc--cccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHH
Q 005001 564 LTPNTER--QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDAL 641 (720)
Q Consensus 564 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (720)
....... .......++..|+|||.+.+..++.++|||||||++|||++|+.||....... ..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~----------------~~ 218 (266)
T cd06651 155 RLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA----------------AI 218 (266)
T ss_pred ccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH----------------HH
Confidence 5532111 11123458899999999999889999999999999999999999997542211 11
Q ss_pred HhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 642 AKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.+..........+......+.+++ .||..+|++||+++|++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 219 FKIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred HHHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 111111112233445566677888 6888899999999999864
No 241
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.4e-36 Score=322.49 Aligned_cols=260 Identities=18% Similarity=0.280 Sum_probs=193.5
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
...|+..+.||+|+||.||+|... +++.||+|..... ....|+.++++++||||+++++++...+..++|+
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~--------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 136 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG--------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL 136 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc--------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence 357999999999999999999775 4678999875432 2346888999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
|++. ++|.+++.. ....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 137 e~~~-~~l~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 209 (357)
T PHA03209 137 PHYS-SDLYTYLTK---RSRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVV 209 (357)
T ss_pred EccC-CcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCcccccccc
Confidence 9995 588888753 346789999999999999999999999 999999999999999999999999999875332
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhh--------HHHhhc-----c-
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQS--------LVRWAT-----P- 633 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~--------~~~~~~-----~- 633 (720)
. .......||+.|+|||++.+..++.++|||||||++|||+++..|+....+..... +..... +
T Consensus 210 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 287 (357)
T PHA03209 210 A--PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPE 287 (357)
T ss_pred C--cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChh
Confidence 2 12234579999999999999999999999999999999999665553322211000 000000 0
Q ss_pred cc---ccHHHHHhhcccc--cCCCC-------ChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 634 QL---HDIDALAKMVDPA--LNGMY-------PAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 634 ~~---~~~~~~~~~~~~~--~~~~~-------~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.+ ..........+.. .+..+ ....+..+.++|.+||+.||++|||+.|++++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h 351 (357)
T PHA03209 288 EFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY 351 (357)
T ss_pred hcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence 00 0000001111000 00000 01233456779999999999999999999875
No 242
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.8e-36 Score=327.11 Aligned_cols=261 Identities=21% Similarity=0.291 Sum_probs=200.8
Q ss_pred hcCCCccceeccCCCcEEEEEEEc---CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA---NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
..+|.+.+.||+|+||.||++... .+..||+|.+... ....+|++++++++||||+++++++...+..++
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~l 163 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-------KTPGREIDILKTISHRAIINLIHAYRWKSTVCM 163 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEE
Confidence 457999999999999999999653 3578999988542 234579999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
|||++. ++|.+++. ....+++.++..++.|++.||+|||+. +|+||||||+|||++.++.++|+|||++...
T Consensus 164 v~e~~~-~~l~~~l~----~~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~ 235 (392)
T PHA03207 164 VMPKYK-CDLFTYVD----RSGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKL 235 (392)
T ss_pred EehhcC-CCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCcccccc
Confidence 999996 58888884 346789999999999999999999999 9999999999999999999999999998765
Q ss_pred CCCCcc-ccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHH----Hhhc--c-cccc
Q 005001 566 PNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLV----RWAT--P-QLHD 637 (720)
Q Consensus 566 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~----~~~~--~-~~~~ 637 (720)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.......... .... + ....
T Consensus 236 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~ 315 (392)
T PHA03207 236 DAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQ 315 (392)
T ss_pred CcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCC
Confidence 433222 223457999999999999999999999999999999999999999765543211111 1000 0 0000
Q ss_pred ---H---HHHHhhcccccCCCC--C-----hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 638 ---I---DALAKMVDPALNGMY--P-----AKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 638 ---~---~~~~~~~~~~~~~~~--~-----~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
. ..+.+. ....+..+ + ...+.++.++|.+||+.||++||++.|++.+
T Consensus 316 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 316 NGSTNLCKHFKQY-AIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred ccchhHHHHHHhh-cccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0 000010 00011111 1 1234568899999999999999999999976
No 243
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=4e-36 Score=307.64 Aligned_cols=252 Identities=22% Similarity=0.385 Sum_probs=207.3
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
+|+..+.||+|+||.||++... +|+.||+|++............+.+|+.++++++||||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 4788899999999999999664 688999999875544455567889999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
+.+++|.+++... ....+++.++..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 81 CEGGDLYKKINAQ--RGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred CCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence 9999999988632 234678999999999999999999998 99999999999999999999999999987654322
Q ss_pred ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccccc
Q 005001 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPAL 649 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (720)
. ......|++.|+|||++.+..++.++|+|||||++|+|++|+.||....... ...+.....
T Consensus 156 ~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~----------------~~~~~~~~~- 217 (256)
T cd08218 156 E-LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKN----------------LVLKIIRGS- 217 (256)
T ss_pred h-hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHH----------------HHHHHhcCC-
Confidence 1 2223468899999999999899999999999999999999999997533211 111111111
Q ss_pred CCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 650 NGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 650 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
....+...+..+.+++.+||+.+|++||++.+++++
T Consensus 218 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 218 YPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred CCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 112344556788999999999999999999999874
No 244
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=3e-36 Score=310.96 Aligned_cols=250 Identities=27% Similarity=0.448 Sum_probs=199.3
Q ss_pred eeccCCCcEEEEEEEcC-------CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 417 LIGEGSLGRVYRAEFAN-------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 417 ~lG~G~fg~Vy~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
.||+|+||.||+|...+ ++.+++|.+.... .......+.+|+++++.++||||+++++++...+..++||||
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA-TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhccc-chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 69999999999997642 2578999886432 234456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCC-----ceEEcccCC
Q 005001 490 VGNGNLHDMLHFADD---SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL-----NPHLSDCGL 561 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~-----~~kl~Dfg~ 561 (720)
+++++|.++++.... ....+++.++..++.|++.||+|||+. +++|+||||+||+++.++ .++++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 999999999974322 224578999999999999999999998 999999999999999887 899999999
Q ss_pred CccCCCCCcc-ccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHH
Q 005001 562 AALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDID 639 (720)
Q Consensus 562 a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 639 (720)
+......... ......++..|+|||.+.+..++.++|||||||++|||++ |+.||........ .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~---~----------- 223 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEV---L----------- 223 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHH---H-----------
Confidence 8755332211 1122345778999999999999999999999999999998 9999975432111 1
Q ss_pred HHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 005001 640 ALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALV 687 (720)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~ 687 (720)
..+........+...+..+.+++.+||+.+|.+||+++++++.|.
T Consensus 224 ---~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 224 ---QHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred ---HHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 111111112234456778899999999999999999999999885
No 245
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2.6e-36 Score=314.42 Aligned_cols=268 Identities=24% Similarity=0.343 Sum_probs=204.4
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
++|+..+.||+|+||.||+|.+. +++.||+|++..........+.+.+|+++++.++||||+++++++...+..++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46888899999999999999875 58999999987554443345678889999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+++++|.++.+ ....+++.++..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 81 ~~~~~~l~~~~~----~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07846 81 FVDHTVLDDLEK----YPNGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 153 (286)
T ss_pred cCCccHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCC
Confidence 999999988765 234589999999999999999999999 9999999999999999999999999998765443
Q ss_pred CccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccH--------H
Q 005001 569 ERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDI--------D 639 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~--------~ 639 (720)
.. ......++..|+|||++.+ ..++.++||||||+++|||++|+.||...........+.......... .
T Consensus 154 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07846 154 GE-VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNP 232 (286)
T ss_pred cc-ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccch
Confidence 22 2233568899999999876 447889999999999999999999997544321111111100000000 0
Q ss_pred HHHhhcccccCC-----CCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 640 ALAKMVDPALNG-----MYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 640 ~~~~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
....+..+.... ......+..+.+++.+||+.+|++||++++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 233 LFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred HhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 000000000000 0012345778999999999999999999999864
No 246
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=4.6e-36 Score=313.46 Aligned_cols=264 Identities=26% Similarity=0.413 Sum_probs=207.7
Q ss_pred cchhcHHHHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEE
Q 005001 400 YTVASLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYC 477 (720)
Q Consensus 400 ~~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 477 (720)
+++.++..+.++|...+.||+|+||.||+|... +++.+|+|.+.... .....+.+|+.+++++ +|||++++++++
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~l~~h~ni~~~~~~~ 88 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS---DVDEEIEAEYNILQSLPNHPNVVKFYGMF 88 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc---cHHHHHHHHHHHHHHhcCCCCeEEEEEEE
Confidence 455667778899999999999999999999774 68899999886432 2235567888888888 899999999998
Q ss_pred eec-----CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCC
Q 005001 478 AEH-----GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL 552 (720)
Q Consensus 478 ~~~-----~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~ 552 (720)
... +..++||||+++++|.++++........+++..+..++.|++.||+|||+. +++||||||+||+++.++
T Consensus 89 ~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~ 165 (291)
T cd06639 89 YKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEG 165 (291)
T ss_pred EeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCC
Confidence 654 358999999999999999875444456789999999999999999999998 999999999999999999
Q ss_pred ceEEcccCCCccCCCCCccccccccccccccCccccccCC-----CcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhH
Q 005001 553 NPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGI-----YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSL 627 (720)
Q Consensus 553 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~ 627 (720)
.+||+|||++........ ......|+..|+|||.+.... ++.++|||||||++|||++|+.||....+....
T Consensus 166 ~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~-- 242 (291)
T cd06639 166 GVKLVDFGVSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTL-- 242 (291)
T ss_pred CEEEeecccchhcccccc-cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHH--
Confidence 999999999876543221 122346889999999986543 688999999999999999999999754321111
Q ss_pred HHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 628 VRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.. ..+ ........+......+.+++.+||+.||++||++.|++++
T Consensus 243 ~~-----------~~~--~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 243 FK-----------IPR--NPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred HH-----------Hhc--CCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 00 000 0001111233445678999999999999999999999875
No 247
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=6.1e-36 Score=307.27 Aligned_cols=255 Identities=28% Similarity=0.422 Sum_probs=205.9
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.++|+..+.||+|+||.||+|... +++.+++|.+..... .....+.+|++++++++||||+++++++...+..+++|
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~ 79 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG--DDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVM 79 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch--hhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEE
Confidence 357888999999999999999765 578899999865432 24577889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++++|.++++. ....+++.++..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.+.....
T Consensus 80 e~~~~~~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~ 153 (262)
T cd06613 80 EYCGGGSLQDIYQV---TRGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTA 153 (262)
T ss_pred eCCCCCcHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhh
Confidence 99999999998863 235789999999999999999999998 999999999999999999999999999876543
Q ss_pred CCccccccccccccccCccccccC---CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhh
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSG---IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKM 644 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (720)
.. .......++..|+|||.+.+. .++.++||||||+++|||++|+.||....+....... .+.
T Consensus 154 ~~-~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~-------------~~~ 219 (262)
T cd06613 154 TI-AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLI-------------SKS 219 (262)
T ss_pred hh-hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-------------Hhc
Confidence 22 122335688899999999877 8899999999999999999999999764432111110 000
Q ss_pred cccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 645 VDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 645 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.........+...+.++.+++++||..+|.+||++.+++.+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 220 NFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred cCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00001111233456779999999999999999999999853
No 248
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=6.1e-36 Score=306.15 Aligned_cols=251 Identities=21% Similarity=0.353 Sum_probs=206.5
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
+|+..+.||+|+||.||+|... +++.+|+|.+............+.+|++++++++||||+++++.+...+..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 4788899999999999999764 688899999876655556677899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCC-CceEEcccCCCccCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE-LNPHLSDCGLAALTPNT 568 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~-~~~kl~Dfg~a~~~~~~ 568 (720)
+++++|.+++... ....+++..+..++.|++.||+|||++ +++|+||+|+||+++.+ +.+||+|||.+......
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (256)
T cd08220 81 APGGTLAEYIQKR--CNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK 155 (256)
T ss_pred CCCCCHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence 9999999999732 234589999999999999999999999 99999999999999865 46899999998765433
Q ss_pred CccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccc
Q 005001 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPA 648 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (720)
. ......|+..|+|||.+.+..++.++||||||+++|+|++|+.||......... .+... .
T Consensus 156 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~----------------~~~~~-~ 216 (256)
T cd08220 156 S--KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALV----------------LKIMS-G 216 (256)
T ss_pred c--cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHH----------------HHHHh-c
Confidence 2 122356889999999999988999999999999999999999999764432111 11111 1
Q ss_pred cCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 649 LNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 649 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.....+...+..+.+++.+||+.||++||++.|++++
T Consensus 217 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 217 TFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred CCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 1112334456778999999999999999999999864
No 249
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=6.2e-36 Score=306.38 Aligned_cols=250 Identities=27% Similarity=0.393 Sum_probs=204.4
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc---ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL---SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
+|+..+.||+|+||.||+|... +++.|++|.+..... ..+....+.+|+++++.++|+||+++++++...+..++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4677889999999999999776 789999998864332 233456788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
+||+++++|.++++. ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||++....
T Consensus 81 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~ 153 (258)
T cd06632 81 LELVPGGSLAKLLKK----YGSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVV 153 (258)
T ss_pred EEecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceecc
Confidence 999999999999863 35688999999999999999999999 99999999999999999999999999987654
Q ss_pred CCCccccccccccccccCccccccCC-CcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSGI-YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
... ......|+..|+|||.+.... ++.++|+||||+++|+|++|+.||......... .+..
T Consensus 154 ~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~----------------~~~~ 215 (258)
T cd06632 154 EFS--FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAV----------------FKIG 215 (258)
T ss_pred ccc--cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHH----------------HHHH
Confidence 332 223456889999999998776 899999999999999999999999754321110 1111
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
........+...+..+.+++.+||+.+|++||++.+++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 216 RSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred hcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 1011122344556788999999999999999999999864
No 250
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=4.1e-36 Score=310.99 Aligned_cols=249 Identities=29% Similarity=0.441 Sum_probs=205.1
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
++|+..+.||.|+||.||+|... +++.||+|.+.... .......+.+|+++++.++|+||+++++++.+....++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE-AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIME 79 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc-cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEE
Confidence 36888899999999999999765 68899999986543 23445678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+++++|.++++ ...+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||+++.....
T Consensus 80 ~~~~~~L~~~~~-----~~~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 151 (274)
T cd06609 80 YCGGGSCLDLLK-----PGKLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTST 151 (274)
T ss_pred eeCCCcHHHHHh-----hcCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeeccc
Confidence 999999999987 23789999999999999999999999 9999999999999999999999999999776543
Q ss_pred CccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccc
Q 005001 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPA 648 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (720)
. .......|++.|+|||.+.+..++.++||||||+++|||+||+.||....+...... ... .
T Consensus 152 ~-~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~-------------~~~----~ 213 (274)
T cd06609 152 M-SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFL-------------IPK----N 213 (274)
T ss_pred c-cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHH-------------hhh----c
Confidence 2 122345688899999999998899999999999999999999999975442111100 000 0
Q ss_pred cCCCCChh-HHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 649 LNGMYPAK-SLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 649 ~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.....+.. .+..+.+++.+||..||++||++++++++
T Consensus 214 ~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 214 NPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred CCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 11111112 55678899999999999999999999875
No 251
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1e-35 Score=306.93 Aligned_cols=253 Identities=24% Similarity=0.356 Sum_probs=190.1
Q ss_pred eeccCCCcEEEEEEEcCCc---EEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecCCC
Q 005001 417 LIGEGSLGRVYRAEFANGK---IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNG 493 (720)
Q Consensus 417 ~lG~G~fg~Vy~~~~~~~~---~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 493 (720)
.||+|+||.||+|...++. .+++|.+.... .......+.+|+..++.++||||+++++.+......++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA-SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC-ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 5999999999999755433 45666665432 2345678899999999999999999999999999999999999999
Q ss_pred CHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC-ccc
Q 005001 494 NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE-RQV 572 (720)
Q Consensus 494 sL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~-~~~ 572 (720)
+|.++++.........++..+..++.||+.||+|||+. +++||||||+|||++.++.++|+|||++....... ...
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 157 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET 157 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence 99999975433344567778889999999999999998 99999999999999999999999999986432211 112
Q ss_pred cccccccccccCcccccc-------CCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhh
Q 005001 573 STQMVGAFGYSAPEFALS-------GIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKM 644 (720)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (720)
.....++..|+|||++.. ..++.++|||||||++|||++ |..||....+......+ ..+.
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~------------~~~~ 225 (268)
T cd05086 158 EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHV------------IKDQ 225 (268)
T ss_pred ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH------------Hhhc
Confidence 234568899999998853 245789999999999999997 56687643321111000 0000
Q ss_pred cccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 645 VDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 645 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
.........+......+.+++..|| .+|++||++++|++.|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l 266 (268)
T cd05086 226 QVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLL 266 (268)
T ss_pred ccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence 0000111222335567889999999 6799999999999876
No 252
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=9.2e-36 Score=306.31 Aligned_cols=251 Identities=27% Similarity=0.425 Sum_probs=205.4
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
+|...+.||+|+||.||+|... +++.|++|.++...........+.+|+.+++.++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 5778899999999999999764 688999999876654445678899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
+++++|.++++ ....+++..+..++.|++.||.|||+. +|+|+||+|+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~----~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~ 153 (264)
T cd06626 81 CSGGTLEELLE----HGRILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNT 153 (264)
T ss_pred CCCCcHHHHHh----hcCCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCC
Confidence 99999999987 235588999999999999999999999 99999999999999999999999999988765433
Q ss_pred ccccc---cccccccccCccccccCC---CcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHh
Q 005001 570 RQVST---QMVGAFGYSAPEFALSGI---YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAK 643 (720)
Q Consensus 570 ~~~~~---~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (720)
..... ...+++.|+|||++.+.. ++.++||||||+++|||++|+.||.......... ..
T Consensus 154 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~---------------~~ 218 (264)
T cd06626 154 TTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIM---------------FH 218 (264)
T ss_pred CcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHH---------------HH
Confidence 32221 346788999999998766 8899999999999999999999997543211110 00
Q ss_pred hcccccCCCCCh--hHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 005001 644 MVDPALNGMYPA--KSLSRFADIIALCVQPEPEFRPPMSEVVQ 684 (720)
Q Consensus 644 ~~~~~~~~~~~~--~~~~~l~~li~~cl~~dP~~RPs~~ell~ 684 (720)
... ......+. ..+..+.+++.+||+.+|++||++.+++.
T Consensus 219 ~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 219 VGA-GHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred Hhc-CCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000 11111222 23667889999999999999999999875
No 253
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=3.5e-36 Score=311.99 Aligned_cols=248 Identities=25% Similarity=0.437 Sum_probs=203.2
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
.|+..+.||+|+||.||+|.+. +++.||+|.+.... .......+.+|+.++++++||||+++++++..+...++||||
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE-AEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc-chHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence 4666778999999999999764 57889999886443 233456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
+++++|.+++. ...+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++|+|||++.......
T Consensus 84 ~~~~~L~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06642 84 LGGGSALDLLK-----PGPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred cCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcc
Confidence 99999999885 35689999999999999999999998 99999999999999999999999999987654322
Q ss_pred ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccccc
Q 005001 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPAL 649 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (720)
.......|+..|+|||++.+..++.++|||||||++|||++|+.||....+..... ......
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~-----------------~~~~~~ 217 (277)
T cd06642 156 -IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF-----------------LIPKNS 217 (277)
T ss_pred -hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHh-----------------hhhcCC
Confidence 12223468889999999999999999999999999999999999986543211100 011111
Q ss_pred CCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 650 NGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 650 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
....+...+..+.+++.+||+.+|++||++.+++++
T Consensus 218 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 218 PPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 112233456678899999999999999999999985
No 254
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=6.6e-36 Score=316.17 Aligned_cols=255 Identities=25% Similarity=0.351 Sum_probs=205.6
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccCh-HHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL-QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
++|+..+.||+|+||.||+|... +++.||+|.+....... .....+.+|+++++.++|+||+++++.+...+..++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888899999999999999775 48999999997654332 34567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+.+++|.++++. .....+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~~~~--~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 155 (316)
T cd05574 81 DYCPGGELFRLLQR--QPGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDV 155 (316)
T ss_pred EecCCCCHHHHHHh--CCCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhcccc
Confidence 99999999999863 2346789999999999999999999999 999999999999999999999999999865432
Q ss_pred CCcc----------------------------ccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCC
Q 005001 568 TERQ----------------------------VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSS 619 (720)
Q Consensus 568 ~~~~----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~ 619 (720)
.... ......||..|+|||++.+..++.++||||||+++|+|++|..||...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~ 235 (316)
T cd05574 156 EPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGS 235 (316)
T ss_pred cccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCC
Confidence 2110 112346889999999999999999999999999999999999999765
Q ss_pred CCcchhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCC----HHHHHHH
Q 005001 620 RPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPP----MSEVVQA 685 (720)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~ell~~ 685 (720)
.... ...++.............+..+.+++.+||+.||++||+ +.|++++
T Consensus 236 ~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 236 NRDE----------------TFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred chHH----------------HHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 4321 111112111111111225678999999999999999999 6666654
No 255
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.9e-36 Score=315.84 Aligned_cols=253 Identities=25% Similarity=0.399 Sum_probs=206.6
Q ss_pred HHhcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
....+|...+.||+|+||.||+|.. .+++.||+|.+..... .....+.+|+.+++.++|+||+++++++...+..++
T Consensus 16 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l 93 (297)
T cd06656 16 DPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 93 (297)
T ss_pred ChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc--chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEE
Confidence 3456789999999999999999976 4789999999865432 234567889999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
||||+++++|.+++. ...+++.++..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++...
T Consensus 94 v~e~~~~~~L~~~~~-----~~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~ 165 (297)
T cd06656 94 VMEYLAGGSLTDVVT-----ETCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 165 (297)
T ss_pred eecccCCCCHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEc
Confidence 999999999999986 35688999999999999999999999 9999999999999999999999999998765
Q ss_pred CCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
..... ......+++.|+|||.+.+..++.++|||||||++|+|++|+.||....+....... ..
T Consensus 166 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~---------------~~ 229 (297)
T cd06656 166 TPEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI---------------AT 229 (297)
T ss_pred cCCcc-CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeee---------------cc
Confidence 43221 123346889999999999998999999999999999999999999754332110000 00
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
........+...+..+.+++.+||+.||++||++.+++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 230 NGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred CCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0011111234456678899999999999999999999975
No 256
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=2.6e-36 Score=314.16 Aligned_cols=267 Identities=22% Similarity=0.303 Sum_probs=200.3
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
+|+..+.||+|+||.||+|... +|+.||+|++............+.+|++++++++||||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4778889999999999999775 688999999875443333345677899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
+++ +|.+++.. ....+++..+..++.||++||.|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 153 (284)
T cd07839 81 CDQ-DLKKYFDS---CNGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 153 (284)
T ss_pred CCC-CHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCC
Confidence 974 88887752 245689999999999999999999999 99999999999999999999999999987654322
Q ss_pred ccccccccccccccCccccccCC-CcccchhhhHHHHHHHHHhCCCCCCCCCCcchh-hHH-Hhh-ccccccHHHHHhhc
Q 005001 570 RQVSTQMVGAFGYSAPEFALSGI-YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQ-SLV-RWA-TPQLHDIDALAKMV 645 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~-~~~-~~~-~~~~~~~~~~~~~~ 645 (720)
.. .....+++.|+|||.+.+.. ++.++|||||||++|||+||+.|+......... ..+ ... .+............
T Consensus 154 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07839 154 RC-YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLP 232 (284)
T ss_pred CC-cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcc
Confidence 21 22346788999999987754 789999999999999999999987543322111 100 000 00000000011111
Q ss_pred ccccCC---------CCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 646 DPALNG---------MYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 646 ~~~~~~---------~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+..... ......+.++.+++.+||+.||.+|||+++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 233 DYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred cccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 100000 0112245678899999999999999999999864
No 257
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=5e-36 Score=311.82 Aligned_cols=271 Identities=24% Similarity=0.395 Sum_probs=210.0
Q ss_pred cCCCccceeccCCCcEEEEEEEc-----CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEee--cCe
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE--HGQ 482 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~ 482 (720)
..|...+.||+|+||.||+|.+. +++.||+|.+...... .....+.+|++.++.++|+||+++++++.. ...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~ 82 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRS 82 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCc
Confidence 35677789999999999999753 3688999999755433 356788999999999999999999999877 557
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCC
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a 562 (720)
.++||||+++++|.+++... ...+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||.+
T Consensus 83 ~~lv~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 156 (284)
T cd05038 83 LRLIMEYLPSGSLRDYLQRH---RDQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLA 156 (284)
T ss_pred eEEEEecCCCCCHHHHHHhC---ccccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccccc
Confidence 89999999999999999732 23689999999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCccc--cccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHH
Q 005001 563 ALTPNTERQV--STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDA 640 (720)
Q Consensus 563 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 640 (720)
.......... .....++..|+|||.+.+..++.++||||||+++|||++|..|+.......... ... .........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~-~~~-~~~~~~~~~ 234 (284)
T cd05038 157 KVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRM-IGI-AQGQMIVTR 234 (284)
T ss_pred cccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccc-ccc-ccccccHHH
Confidence 8765322211 112245567999999998899999999999999999999999986532211000 000 000011122
Q ss_pred HHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 005001 641 LAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRL 689 (720)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~ 689 (720)
..+.+........+..++.++.+++.+||+.+|++||++.|+++.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 235 LLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 2222222333333445667899999999999999999999999999875
No 258
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=3.8e-36 Score=318.20 Aligned_cols=262 Identities=22% Similarity=0.372 Sum_probs=189.5
Q ss_pred ceeccCCCcEEEEEEEc---CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEee--cCeEEEEEEec
Q 005001 416 FLIGEGSLGRVYRAEFA---NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE--HGQRLLVYEYV 490 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lV~e~~ 490 (720)
.+||+|+||+||+|... +++.||+|.+..... ...+.+|+.++++++||||+++++++.. ....++||||+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA 82 (317)
T ss_pred cccccCCCeEEEEEEEccCCCCceEEEEEECCCCC----cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEecc
Confidence 47999999999999764 467899999865432 2346789999999999999999998854 45689999998
Q ss_pred CCCCHHHHhhhccC-----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEe----CCCCceEEcccCC
Q 005001 491 GNGNLHDMLHFADD-----SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL----DDELNPHLSDCGL 561 (720)
Q Consensus 491 ~~gsL~~~l~~~~~-----~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll----~~~~~~kl~Dfg~ 561 (720)
.+ +|.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+
T Consensus 83 ~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07868 83 EH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred CC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence 65 88888764321 123589999999999999999999999 99999999999999 4567899999999
Q ss_pred CccCCCCCcc--ccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcch-------hh---HH
Q 005001 562 AALTPNTERQ--VSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSE-------QS---LV 628 (720)
Q Consensus 562 a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~-------~~---~~ 628 (720)
++........ ......||+.|+|||++.+. .++.++||||+||++|||++|+.||........ .. ..
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~ 238 (317)
T cd07868 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF 238 (317)
T ss_pred eeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHH
Confidence 9865432211 12345789999999999874 589999999999999999999999975432110 00 00
Q ss_pred H-hhccccccHHHHHhh---------cccc-cCC--------CCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 629 R-WATPQLHDIDALAKM---------VDPA-LNG--------MYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 629 ~-~~~~~~~~~~~~~~~---------~~~~-~~~--------~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
. ...+....+....++ .... ... .........+.+|+++||+.||++|||++|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~h 314 (317)
T cd07868 239 NVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 314 (317)
T ss_pred HhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0 000000011111000 0000 000 0001123457899999999999999999999864
No 259
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.1e-36 Score=314.45 Aligned_cols=251 Identities=27% Similarity=0.420 Sum_probs=205.9
Q ss_pred hcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
..+|+..+.||.|+||.||+|.. .+++.|++|.+.... ......+.+|+..++.++||||+++++++...+..++|+
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 95 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK--QPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM 95 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc--CchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence 35688899999999999999965 578999999986443 223566788999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++++|.+++. ...+++.++..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++.....
T Consensus 96 e~~~~~~L~~~~~-----~~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~ 167 (296)
T cd06655 96 EYLAGGSLTDVVT-----ETCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITP 167 (296)
T ss_pred EecCCCcHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhccc
Confidence 9999999999886 34689999999999999999999999 999999999999999999999999999876543
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
... ......|+..|+|||.+.+..++.++|||||||++|+|++|+.||....+......+ .. ..
T Consensus 168 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~-------------~~--~~ 231 (296)
T cd06655 168 EQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI-------------AT--NG 231 (296)
T ss_pred ccc-cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-------------Hh--cC
Confidence 222 223346889999999999988999999999999999999999999765432111100 00 01
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
......+...+..+.++|.+||..||++||++.+++++
T Consensus 232 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 232 TPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred CcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 11112234456778899999999999999999999965
No 260
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=6.1e-36 Score=311.06 Aligned_cols=250 Identities=26% Similarity=0.405 Sum_probs=200.2
Q ss_pred CCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEec
Q 005001 412 FSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYV 490 (720)
Q Consensus 412 y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 490 (720)
|+..+.||+|+||.||+|... ++..+++|.+.... ......+.+|+++++.++||||+++++++...+..++|+||+
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~ 84 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS--EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC 84 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC--HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEec
Confidence 567788999999999999776 47788888885432 344567888999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCc
Q 005001 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER 570 (720)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 570 (720)
++++|..++.. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 85 ~~~~l~~~~~~---~~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~- 157 (282)
T cd06643 85 AGGAVDAVMLE---LERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI- 157 (282)
T ss_pred CCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccccccc-
Confidence 99999988763 235789999999999999999999999 99999999999999999999999999987553322
Q ss_pred cccccccccccccCccccc-----cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 571 QVSTQMVGAFGYSAPEFAL-----SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
.......|+..|+|||++. +..++.++|||||||++|||++|+.||....+.... .. .....
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~--~~-----------~~~~~ 224 (282)
T cd06643 158 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVL--LK-----------IAKSE 224 (282)
T ss_pred cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHH--HH-----------HhhcC
Confidence 1223356899999999984 445788999999999999999999999754321110 00 00000
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
......+...+..+.+++.+||+.||.+||++.+++++
T Consensus 225 --~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 225 --PPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred --CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01111233456788999999999999999999998865
No 261
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=7.6e-36 Score=308.05 Aligned_cols=253 Identities=26% Similarity=0.352 Sum_probs=191.9
Q ss_pred eeccCCCcEEEEEEEcC---CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecCCC
Q 005001 417 LIGEGSLGRVYRAEFAN---GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNG 493 (720)
Q Consensus 417 ~lG~G~fg~Vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 493 (720)
.||+|+||.||+|...+ ...+++|.+.... .......+.+|+..++.++||||+++++.+...+..++||||+++|
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA-TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccC-ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 58999999999996543 3468888776432 3444567889999999999999999999999999999999999999
Q ss_pred CHHHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCcc-
Q 005001 494 NLHDMLHFADDS-SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ- 571 (720)
Q Consensus 494 sL~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~- 571 (720)
+|.+++...... ....++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 999999754321 23456788899999999999999999 9999999999999999999999999998654322211
Q ss_pred ccccccccccccCcccccc-------CCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHh
Q 005001 572 VSTQMVGAFGYSAPEFALS-------GIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAK 643 (720)
Q Consensus 572 ~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (720)
......++..|+|||++.. ..++.++|||||||++|||++ |..||....+....... ...
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~------------~~~ 225 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQV------------VRE 225 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHH------------hhc
Confidence 1123346778999998753 356889999999999999999 78888654322111000 000
Q ss_pred hcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 644 MVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 644 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
..........+...+..+.+++..|| .||++||++++|++.|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 226 QDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred cCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 00001111223345667788999999 5999999999999876
No 262
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3e-36 Score=310.63 Aligned_cols=254 Identities=26% Similarity=0.396 Sum_probs=201.2
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.++|...+.||+|+||.||+|... +++.||+|.++... ......+.+|+.+++.++||||+++++++...+..++|+
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~ 85 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP--GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICM 85 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc--hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Confidence 346788889999999999999764 68899999886442 233456788999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++++|.++++ ..+.+++.++..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.....
T Consensus 86 e~~~~~~L~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06645 86 EFCGGGSLQDIYH----VTGPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITA 158 (267)
T ss_pred eccCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccC
Confidence 9999999999986 245789999999999999999999999 999999999999999999999999999875533
Q ss_pred CCccccccccccccccCccccc---cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhh
Q 005001 568 TERQVSTQMVGAFGYSAPEFAL---SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKM 644 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (720)
.. .......|+..|+|||++. ...++.++|||||||++|||++|..||....+.......... ..
T Consensus 159 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~-----------~~ 226 (267)
T cd06645 159 TI-AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKS-----------NF 226 (267)
T ss_pred cc-cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhcc-----------CC
Confidence 21 1223457899999999975 456889999999999999999999998654432111100000 00
Q ss_pred cccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 645 VDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 645 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
..+.. ......+..+.+++.+||+.+|++||++++++++
T Consensus 227 ~~~~~--~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 227 QPPKL--KDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred CCCcc--cccCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 00000 0111244568899999999999999999998864
No 263
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=8.7e-37 Score=324.82 Aligned_cols=243 Identities=23% Similarity=0.309 Sum_probs=189.1
Q ss_pred eccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcC---CCCCccccceEEeecCeEEEEEEecCC
Q 005001 418 IGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRL---RHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (720)
Q Consensus 418 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~~~lV~e~~~~ 492 (720)
||+|+||+||+|... +++.||+|++..... .......+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999765 589999999864332 122334445566665554 799999999999999999999999999
Q ss_pred CCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccc
Q 005001 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (720)
Q Consensus 493 gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 572 (720)
|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.++|+|||++....... ..
T Consensus 81 g~L~~~l~----~~~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~-~~ 152 (330)
T cd05586 81 GELFWHLQ----KEGRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDN-KT 152 (330)
T ss_pred ChHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-CC
Confidence 99999886 346789999999999999999999999 99999999999999999999999999987543222 22
Q ss_pred cccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCC
Q 005001 573 STQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNG 651 (720)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (720)
.....||+.|+|||++.+. .++.++|||||||++|||++|+.||........ ...+.......
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~----------------~~~i~~~~~~~ 216 (330)
T cd05586 153 TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQM----------------YRNIAFGKVRF 216 (330)
T ss_pred ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHH----------------HHHHHcCCCCC
Confidence 3346799999999998765 479999999999999999999999976432111 11111111110
Q ss_pred CCChhHHHHHHHHHHHhcCCCCCCCC----CHHHHHHH
Q 005001 652 MYPAKSLSRFADIIALCVQPEPEFRP----PMSEVVQA 685 (720)
Q Consensus 652 ~~~~~~~~~l~~li~~cl~~dP~~RP----s~~ell~~ 685 (720)
.....+..+.+++++||+.||.+|| ++.+++++
T Consensus 217 -~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 217 -PKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred -CCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence 1112456788999999999999998 56666653
No 264
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.8e-36 Score=311.36 Aligned_cols=255 Identities=24% Similarity=0.387 Sum_probs=204.3
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
++|+..+.||+|+||.||+|... +++.||+|.+.... .......+.+|+.++++++||||+++++.+...+..++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL-DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCME 79 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEe
Confidence 35788889999999999999776 78999999886432 33445678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+++++|..+++... ....+++..+..++.|++.||.|||+.+ +|+||||||+||+++.++.++|+|||++......
T Consensus 80 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 156 (286)
T cd06622 80 YMDAGSLDKLYAGGV-ATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS 156 (286)
T ss_pred ecCCCCHHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCC
Confidence 999999999886321 1347899999999999999999999742 8999999999999999999999999998765322
Q ss_pred CccccccccccccccCccccccCC------CcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 569 ERQVSTQMVGAFGYSAPEFALSGI------YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
. .....+++.|+|||.+.+.. ++.++|||||||++|||++|+.||......... ..+.
T Consensus 157 ~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~-------------~~~~ 220 (286)
T cd06622 157 L---AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIF-------------AQLS 220 (286)
T ss_pred c---cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHH-------------HHHH
Confidence 1 22346888999999986543 588999999999999999999999653221111 1111
Q ss_pred hhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 643 KMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
..... .....+...+.++.+++.+||+.+|++||++.+++++
T Consensus 221 ~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 221 AIVDG-DPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred HHhhc-CCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 11111 1122344567788999999999999999999999975
No 265
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=7.5e-36 Score=306.82 Aligned_cols=238 Identities=26% Similarity=0.395 Sum_probs=188.2
Q ss_pred eeccCCCcEEEEEEEcC-------------CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeE
Q 005001 417 LIGEGSLGRVYRAEFAN-------------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (720)
Q Consensus 417 ~lG~G~fg~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (720)
.||+|+||.||+|.... ...|++|.+.... ......+.+|+.+++.++||||+++++++..+...
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~ 79 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFFETASMMRQVSHKHIVLLYGVCVRDVEN 79 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 68999999999997532 2358888876432 23345788889999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCc-------eEE
Q 005001 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN-------PHL 556 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~-------~kl 556 (720)
++||||+++|+|..+++. ....+++..+..++.||++||+|||+. +|+||||||+|||++.++. +++
T Consensus 80 ~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l 153 (262)
T cd05077 80 IMVEEFVEFGPLDLFMHR---KSDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKL 153 (262)
T ss_pred EEEEecccCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEe
Confidence 999999999999988863 235689999999999999999999999 9999999999999987664 899
Q ss_pred cccCCCccCCCCCccccccccccccccCccccc-cCCCcccchhhhHHHHHHHHH-hCCCCCCCCCCcchhhHHHhhccc
Q 005001 557 SDCGLAALTPNTERQVSTQMVGAFGYSAPEFAL-SGIYTVKSDVYSFGVVMLELL-TGRKPLDSSRPRSEQSLVRWATPQ 634 (720)
Q Consensus 557 ~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGv~l~ell-tg~~pf~~~~~~~~~~~~~~~~~~ 634 (720)
+|||++...... ....++..|+|||.+. +..++.++|||||||++|||+ +|..||.........
T Consensus 154 ~d~g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~--------- 219 (262)
T cd05077 154 SDPGIPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE--------- 219 (262)
T ss_pred CCCCCCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH---------
Confidence 999998654322 2345788999999887 466899999999999999998 588887643221110
Q ss_pred cccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 635 LHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
+....... .......++.++|.+||+.||++||++.+|++.|
T Consensus 220 --------~~~~~~~~--~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 220 --------RFYEGQCM--LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred --------HHHhcCcc--CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 00011111 1122346788999999999999999999999876
No 266
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.2e-35 Score=307.11 Aligned_cols=258 Identities=23% Similarity=0.432 Sum_probs=203.0
Q ss_pred CCccceeccCCCcEEEEEEEc----CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecC------
Q 005001 412 FSQEFLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG------ 481 (720)
Q Consensus 412 y~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 481 (720)
|...+.||+|+||.||+|.+. +++.||+|.+..........+++.+|+++++.++||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 556778999999999999753 3688999999766555556778899999999999999999999875432
Q ss_pred eEEEEEEecCCCCHHHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEccc
Q 005001 482 QRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDC 559 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~--~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Df 559 (720)
..++++||+.+|+|.+++.... .....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 2478999999999998875322 1223578999999999999999999998 9999999999999999999999999
Q ss_pred CCCccCCCCCcc-ccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhcccccc
Q 005001 560 GLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHD 637 (720)
Q Consensus 560 g~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 637 (720)
|+++........ ......+++.|++||.+.+..++.++|||||||++|||++ |+.||..........
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~----------- 226 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYN----------- 226 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHH-----------
Confidence 998865432211 1222345678999999999999999999999999999999 888886543211110
Q ss_pred HHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 005001 638 IDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRL 689 (720)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~ 689 (720)
.+... .....+...+..+.+++.+||+.+|++||++.++++.|+++
T Consensus 227 -----~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 227 -----YLIKG-NRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred -----HHHcC-CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11110 01112234557899999999999999999999999999875
No 267
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=5.7e-36 Score=314.38 Aligned_cols=267 Identities=22% Similarity=0.321 Sum_probs=201.1
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
++|+..+.||+|+||.||+|... +++.||+|.+..... ......+.+|+.+++.++||||+++++++...+..++|||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e 84 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 84 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc-cCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEe
Confidence 46888999999999999999765 578999999864432 2233457789999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|++ ++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++......
T Consensus 85 ~~~-~~l~~~l~~---~~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 157 (301)
T cd07873 85 YLD-KDLKQYLDD---CGNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIP 157 (301)
T ss_pred ccc-cCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCC
Confidence 997 589888863 245688999999999999999999999 9999999999999999999999999998754332
Q ss_pred CccccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhh--ccccccHHHHH---
Q 005001 569 ERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWA--TPQLHDIDALA--- 642 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~--- 642 (720)
.. ......+++.|+|||.+.+. .++.++|||||||++|||++|+.||...........+... .+....+....
T Consensus 158 ~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (301)
T cd07873 158 TK-TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNE 236 (301)
T ss_pred CC-cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccc
Confidence 21 12234578899999998764 4788999999999999999999999865432221111100 00000000000
Q ss_pred hhc---ccccCC----CCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 643 KMV---DPALNG----MYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 643 ~~~---~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
... .+.... ......+..+.+||.+||+.||.+|||++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 237 EFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred cccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 000 000000 0112345678899999999999999999999974
No 268
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.5e-36 Score=328.98 Aligned_cols=262 Identities=20% Similarity=0.235 Sum_probs=197.3
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
...|.+.+.||+|+||.||+|.+. .++.||+|... ...+.+|++++++++|+||+++++++...+..++||
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~--------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~ 239 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW--------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVL 239 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc--------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 457999999999999999999776 47889999642 223568999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
|++. ++|.+++.. ....+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 240 e~~~-~~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~ 312 (461)
T PHA03211 240 PKYR-SDLYTYLGA---RLRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARG 312 (461)
T ss_pred EccC-CCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceeccc
Confidence 9995 688888752 234799999999999999999999999 999999999999999999999999999976543
Q ss_pred CCcc-ccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCc-----c---hhhHHHhhc---ccc
Q 005001 568 TERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPR-----S---EQSLVRWAT---PQL 635 (720)
Q Consensus 568 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~-----~---~~~~~~~~~---~~~ 635 (720)
.... ......||+.|+|||++.+..++.++|||||||++|||++|..|+...... . ....+.... ..+
T Consensus 313 ~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~ 392 (461)
T PHA03211 313 SWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEF 392 (461)
T ss_pred ccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccC
Confidence 2211 223457999999999999999999999999999999999988765432211 0 011111111 000
Q ss_pred c---cHH---HHHhhcccccCCCCC-------hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 636 H---DID---ALAKMVDPALNGMYP-------AKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 636 ~---~~~---~~~~~~~~~~~~~~~-------~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
. ... ............... ......+.+|+.+||+.||.+|||+.|++++
T Consensus 393 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 393 PQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred CCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0 000 000000000000000 0223468899999999999999999999976
No 269
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.8e-36 Score=312.17 Aligned_cols=262 Identities=24% Similarity=0.370 Sum_probs=205.9
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
++|+..+.||+|+||+||+|... +|+.||+|++.... .......+.+|+++++.++||||+++++++...+..++|||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCME 83 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC-cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEe
Confidence 56788889999999999999765 58889999876443 23345778899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+++++|.++++. .+.+++..+..++.+++.||.|||+.+ +++||||||+||+++.++.++|+|||++......
T Consensus 84 ~~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 84 FMDCGSLDRIYKK----GGPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred cCCCCCHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence 9999999998863 357899999999999999999999742 8999999999999999999999999998654222
Q ss_pred CccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccc
Q 005001 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPA 648 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (720)
. .....|+..|+|||++.+..++.++|||||||++|||++|+.||............ .....+....+....
T Consensus 158 ~---~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 229 (284)
T cd06620 158 I---ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDD-----PMGILDLLQQIVQEP 229 (284)
T ss_pred c---cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhh-----hhHHHHHHHHHhhcc
Confidence 1 22356899999999998889999999999999999999999999864432110000 000001111121111
Q ss_pred cCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 649 LNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 649 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
.........+..+.+++.+||+.||++||++.|++++.
T Consensus 230 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 230 PPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred CCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 11111122556789999999999999999999999864
No 270
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.3e-35 Score=303.99 Aligned_cols=251 Identities=30% Similarity=0.482 Sum_probs=202.3
Q ss_pred CccceeccCCCcEEEEEEEcC-----CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 413 SQEFLIGEGSLGRVYRAEFAN-----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 413 ~~~~~lG~G~fg~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
+..+.||+|+||.||++...+ +..||+|++.... .......+.+|+..+..++|+||+++++++...+..+++|
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA-DEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC-ChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 456789999999999997754 4889999996543 2235678899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++++|.+++.... ...+++.++..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 155 (258)
T smart00219 81 EYMEGGDLLDYLRKNR--PKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYD 155 (258)
T ss_pred eccCCCCHHHHHHhhh--hccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceeccc
Confidence 9999999999987321 12289999999999999999999999 999999999999999999999999999976654
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
..........+++.|+|||.+.+..++.++||||+|+++|||++ |..||......... +...
T Consensus 156 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~-----------------~~~~ 218 (258)
T smart00219 156 DDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVL-----------------EYLK 218 (258)
T ss_pred ccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH-----------------HHHh
Confidence 32222212347789999999988889999999999999999999 78888653221111 1111
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
.......+...+.++.+++.+||..||++|||+.++++.|
T Consensus 219 ~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 219 KGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred cCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 1111223344677899999999999999999999998764
No 271
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.5e-35 Score=309.84 Aligned_cols=252 Identities=25% Similarity=0.418 Sum_probs=202.5
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.+.|+..+.||+|+||.||+|... +++.|++|.+... .......+.+|+.+++.++||||+++++++..++..++||
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 88 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMI 88 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEE
Confidence 356888999999999999999775 4889999998643 3445677889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++++|..++.. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++.....
T Consensus 89 e~~~~~~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 162 (292)
T cd06644 89 EFCPGGAVDAIMLE---LDRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVK 162 (292)
T ss_pred ecCCCCcHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceeccc
Confidence 99999999888753 235689999999999999999999998 999999999999999999999999999865432
Q ss_pred CCccccccccccccccCccccc-----cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 568 TERQVSTQMVGAFGYSAPEFAL-----SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
.. .......+++.|+|||++. ...++.++|||||||++|||++|..||....+... ..
T Consensus 163 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~----------------~~ 225 (292)
T cd06644 163 TL-QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV----------------LL 225 (292)
T ss_pred cc-cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHH----------------HH
Confidence 21 1223456889999999985 34578899999999999999999999965432111 11
Q ss_pred hhcccc-cCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 643 KMVDPA-LNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 643 ~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+..... .....+...+.++.+++.+||+.||++||++.+++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 226 KIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred HHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 111110 0111233455678899999999999999999999864
No 272
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.3e-35 Score=306.13 Aligned_cols=255 Identities=24% Similarity=0.360 Sum_probs=200.8
Q ss_pred HHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
.+++.+.....||+|+||.||+|.+. ++..|++|.+.... ......+.+|+.++++++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 82 (268)
T cd06624 5 YEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD--SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82 (268)
T ss_pred cccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC--HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence 34455556678999999999999754 57789999886543 3345678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCC--CHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC-CCceEEcccCCC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNL--TWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD-ELNPHLSDCGLA 562 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~--~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~-~~~~kl~Dfg~a 562 (720)
|+||+++++|.++++.. ...+ ++..+..++.|++.||+|||+. +|+||||||+||+++. ++.++|+|||.+
T Consensus 83 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~ 156 (268)
T cd06624 83 FMEQVPGGSLSALLRSK---WGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTS 156 (268)
T ss_pred EEecCCCCCHHHHHHHh---cccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhh
Confidence 99999999999999732 2334 7888899999999999999998 9999999999999976 679999999998
Q ss_pred ccCCCCCccccccccccccccCccccccCC--CcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHH
Q 005001 563 ALTPNTERQVSTQMVGAFGYSAPEFALSGI--YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDA 640 (720)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 640 (720)
........ ......|++.|+|||++.+.. ++.++||||||+++|+|++|+.||.......... +
T Consensus 157 ~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~---~---------- 222 (268)
T cd06624 157 KRLAGINP-CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAM---F---------- 222 (268)
T ss_pred eecccCCC-ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhH---h----------
Confidence 76533221 122345889999999987654 7889999999999999999999996532211100 0
Q ss_pred HHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 641 LAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+..........+.....++.+++.+||+.+|++||++.|++++
T Consensus 223 --~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 223 --KVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred --hhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 0000011122344566788999999999999999999999864
No 273
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.7e-35 Score=304.66 Aligned_cols=252 Identities=25% Similarity=0.342 Sum_probs=200.8
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc---ChHHHHHHHHHHHHhhcCCCCCccccceEEeec--CeE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL---SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQR 483 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 483 (720)
++|...+.||+|+||.||+|... ++..||+|.+..... .......+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46888899999999999999764 588999998853321 223456788899999999999999999988663 467
Q ss_pred EEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
++||||+++++|.+++.. ...+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.
T Consensus 82 ~~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~ 154 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKS----YGALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASK 154 (265)
T ss_pred EEEEEecCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCcccc
Confidence 899999999999999862 34578899999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCcc--ccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHH
Q 005001 564 LTPNTERQ--VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDAL 641 (720)
Q Consensus 564 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (720)
........ ......|+..|+|||.+.+..++.++|||||||++|||++|+.||....... ..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~----------------~~ 218 (265)
T cd06652 155 RLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMA----------------AI 218 (265)
T ss_pred ccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHH----------------HH
Confidence 55322111 1223468899999999998889999999999999999999999996532211 11
Q ss_pred HhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 642 AKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.+..........+......+.+++.+||. +|++||+++|++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 219 FKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred HHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 11111111223455566778899999995 99999999999864
No 274
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-36 Score=286.83 Aligned_cols=253 Identities=24% Similarity=0.398 Sum_probs=203.2
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV 486 (720)
.|+.+....||.|+-|.|++++.. +|..+|||.+.... ..++.++++..++++... ++|+||+.+|||..+...++.
T Consensus 91 indl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~-Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~Ic 169 (391)
T KOG0983|consen 91 INDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG-NKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFIC 169 (391)
T ss_pred hHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccC-CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHH
Confidence 345566778999999999999765 58999999997655 445566777777776554 589999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
||.|.. .++.+++. ..+++++..+-++...+.+||.||.+++ +|+|||+||+|||+|+.|.+|++|||++.++-
T Consensus 170 MelMs~-C~ekLlkr---ik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlv 243 (391)
T KOG0983|consen 170 MELMST-CAEKLLKR---IKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLV 243 (391)
T ss_pred HHHHHH-HHHHHHHH---hcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceee
Confidence 999854 56666653 3467999999999999999999999986 99999999999999999999999999997765
Q ss_pred CCCccccccccccccccCcccccc---CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHh
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALS---GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAK 643 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (720)
+.. ..+.-+|.+.|||||.+.- ..|+.++||||||++++||.||+.||.+.+-. .+.+-+
T Consensus 244 dSk--AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td---------------Fe~ltk 306 (391)
T KOG0983|consen 244 DSK--AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD---------------FEVLTK 306 (391)
T ss_pred ccc--ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc---------------HHHHHH
Confidence 432 2344579999999999974 46899999999999999999999999874322 233333
Q ss_pred hccccc-CCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 644 MVDPAL-NGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 644 ~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+.+... ........+..+.+++..||++|+.+||...+++++
T Consensus 307 vln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 307 VLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred HHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 333221 111222367789999999999999999999999987
No 275
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.5e-37 Score=324.59 Aligned_cols=247 Identities=22% Similarity=0.345 Sum_probs=197.0
Q ss_pred ccceeccCCCcEEEEEEEc-CCcEEEEEEccccc--cChHHHHHHHHHHHHhhcCCCCCccccceEEeecCe--EEEEEE
Q 005001 414 QEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAA--LSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ--RLLVYE 488 (720)
Q Consensus 414 ~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~--~~lV~e 488 (720)
...+||+|+|-+||+|.+. +|..||.-.++... .+....++|..|+.+|+.++||||++++++|.+... ..+|+|
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE 123 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE 123 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence 3558999999999999654 57777764443322 245556899999999999999999999999987654 789999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC-CCceEEcccCCCccCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD-ELNPHLSDCGLAALTPN 567 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~ 567 (720)
.+..|+|+.++++ .+.++....+.+++||++||.|||++ .|+|||||||-+||+|+. -|.|||+|+|+|.....
T Consensus 124 L~TSGtLr~Y~kk----~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 124 LFTSGTLREYRKK----HRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK 198 (632)
T ss_pred cccCCcHHHHHHH----hccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence 9999999999974 46788889999999999999999997 579999999999999976 48999999999987644
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
. .....+|||.|||||++. ..|+..+||||||++++||+|+..||..-..... .+.++...
T Consensus 199 s---~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQ---------------IYKKV~SG 259 (632)
T KOG0584|consen 199 S---HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQ---------------IYKKVTSG 259 (632)
T ss_pred c---ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHH---------------HHHHHHcC
Confidence 3 223478999999999887 8899999999999999999999999975433211 11122111
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.....+..-...++.+||.+|+.. .++||++.|+|+.
T Consensus 260 iKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 260 IKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred CCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 111111112235688999999999 9999999999965
No 276
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.2e-35 Score=309.46 Aligned_cols=268 Identities=22% Similarity=0.327 Sum_probs=205.4
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
+|+..+.||+|+||.||+|.+. +|+.||+|++............+.+|+.++++++||||+++++++......++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4778889999999999999764 689999999876554444567789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
+ +++|.+++.. ....+++.++..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~-~~~L~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (286)
T cd07832 81 M-PSDLSEVLRD---EERPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEE 153 (286)
T ss_pred c-CCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC
Confidence 9 9999999863 236789999999999999999999999 99999999999999999999999999988765433
Q ss_pred ccccccccccccccCccccccCC-CcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhH-HHh-hcc------ccccHHH
Q 005001 570 RQVSTQMVGAFGYSAPEFALSGI-YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSL-VRW-ATP------QLHDIDA 640 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~-~~~-~~~------~~~~~~~ 640 (720)
........|+..|+|||.+.+.. ++.++||||+|+++|||++|..||........... ... ..+ .......
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07832 154 PRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPD 233 (286)
T ss_pred CCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcch
Confidence 22223456899999999987644 68999999999999999999888865443211111 110 000 0000000
Q ss_pred HHhhcccccCC----CCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 641 LAKMVDPALNG----MYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 641 ~~~~~~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
........... ......+..+.+++++||+.||++||++++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 234 YNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred hhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00000000000 0011335788999999999999999999999865
No 277
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.1e-35 Score=304.23 Aligned_cols=247 Identities=27% Similarity=0.444 Sum_probs=199.7
Q ss_pred cCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
++|...+.||+|+||.||++.. +++.||+|.+.... ....+.+|+.++++++||||+++++++..+ ..++||||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~ 79 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMEL 79 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEEC
Confidence 4578889999999999999975 67889999986432 345788999999999999999999988654 47999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
+++++|.+++... ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 80 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~ 154 (254)
T cd05083 80 MSKGNLVNFLRTR--GRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV 154 (254)
T ss_pred CCCCCHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceeccccC
Confidence 9999999999742 234688999999999999999999998 99999999999999999999999999987543221
Q ss_pred ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccc
Q 005001 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPA 648 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (720)
.....+..|+|||.+.+..++.++|+|||||++|||++ |+.||......... ......
T Consensus 155 ----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~-----------------~~~~~~ 213 (254)
T cd05083 155 ----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVK-----------------ECVEKG 213 (254)
T ss_pred ----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHH-----------------HHHhCC
Confidence 12234568999999998899999999999999999998 99999754322111 111111
Q ss_pred cCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 005001 649 LNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVR 688 (720)
Q Consensus 649 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~ 688 (720)
.....+...+..+.+++.+||+.+|++||+++++++.|++
T Consensus 214 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 214 YRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 1112234456788999999999999999999999988753
No 278
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.5e-35 Score=305.48 Aligned_cols=255 Identities=25% Similarity=0.435 Sum_probs=205.4
Q ss_pred CCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccC----hHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALS----LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
+|+..+.||+|+||.||+|.. .+++.||+|.+...... ......+.+|+..+++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477788999999999999975 56899999998643321 1235678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCC-ceEEcccCCCcc
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL-NPHLSDCGLAAL 564 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~-~~kl~Dfg~a~~ 564 (720)
|+||+++++|.+++.. ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++ .++|+|||.+..
T Consensus 81 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~ 153 (268)
T cd06630 81 FVEWMAGGSVSHLLSK----YGAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAAR 153 (268)
T ss_pred EEeccCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcccccccc
Confidence 9999999999999863 35688999999999999999999999 999999999999998776 599999999876
Q ss_pred CCCCCc---cccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHH
Q 005001 565 TPNTER---QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDAL 641 (720)
Q Consensus 565 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (720)
...... .......|+..|+|||.+.+..++.++||||+|+++|+|++|..||........... .
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~-------------~ 220 (268)
T cd06630 154 LAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLAL-------------I 220 (268)
T ss_pred cccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHH-------------H
Confidence 644321 112234688999999999988899999999999999999999999965432211111 1
Q ss_pred HhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 642 AKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.+..........+...+.++.+++.+||+.+|++||++.+++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 221 FKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred HHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 11111122233455567789999999999999999999999864
No 279
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=7.7e-36 Score=307.14 Aligned_cols=254 Identities=27% Similarity=0.432 Sum_probs=205.5
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
++|+..+.||+|+||.||+|.+. +++.|++|.+..... ......+.+|++++++++||||+++++++...+..++|+|
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN-EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICME 79 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC-hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEE
Confidence 35777889999999999999776 688999998875532 3456778899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHE-VCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~-~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
|+++++|.+++... ...+++..+..++.|++.||+|||+ . +++|+||||+||+++.++.++|+|||.+.....
T Consensus 80 ~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~ 153 (265)
T cd06605 80 YMDGGSLDKILKEV---QGRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVN 153 (265)
T ss_pred ecCCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHH
Confidence 99999999999742 2678999999999999999999999 7 999999999999999999999999999865532
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
... ....++..|+|||.+.+..++.++||||||+++|+|++|+.||......... ...........
T Consensus 154 ~~~---~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~-----------~~~~~~~~~~~ 219 (265)
T cd06605 154 SLA---KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDG-----------IFELLQYIVNE 219 (265)
T ss_pred HHh---hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccccc-----------HHHHHHHHhcC
Confidence 211 1256889999999999999999999999999999999999999754321110 00111111111
Q ss_pred ccCCCCChh-HHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 648 ALNGMYPAK-SLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 648 ~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.. ...+.. .+..+.++|.+||..||++||++.+++++
T Consensus 220 ~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 220 PP-PRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred CC-CCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 11 112222 56778999999999999999999999865
No 280
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=9.2e-36 Score=309.35 Aligned_cols=252 Identities=27% Similarity=0.418 Sum_probs=204.5
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.++|++.+.||+|+||.||+|.+. +++.||+|.+... .......+.+|+.++++++||||+++++++..++..++||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE--SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILI 81 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEe
Confidence 456888999999999999999775 6889999998643 3344567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++++|.+++.. ....+++..+..++.|++.||.|||+. +|+|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~ 155 (280)
T cd06611 82 EFCDGGALDSIMLE---LERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKS 155 (280)
T ss_pred eccCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhcc
Confidence 99999999999863 235689999999999999999999999 999999999999999999999999998865433
Q ss_pred CCccccccccccccccCccccc-----cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 568 TERQVSTQMVGAFGYSAPEFAL-----SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
.. .......|++.|+|||.+. +..++.++||||||+++|||++|+.||......... .
T Consensus 156 ~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~----------------~ 218 (280)
T cd06611 156 TL-QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVL----------------L 218 (280)
T ss_pred cc-cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHH----------------H
Confidence 22 1223456899999999985 345778999999999999999999999764322111 1
Q ss_pred hhcccc-cCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 643 KMVDPA-LNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 643 ~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
++.... .....+...+..+.+++.+||+.||.+||++.+++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 219 KILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred HHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 111100 0111233456678899999999999999999999876
No 281
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1e-35 Score=307.96 Aligned_cols=238 Identities=26% Similarity=0.404 Sum_probs=187.6
Q ss_pred eeccCCCcEEEEEEEcC-------------------------CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCcc
Q 005001 417 LIGEGSLGRVYRAEFAN-------------------------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471 (720)
Q Consensus 417 ~lG~G~fg~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 471 (720)
.||+|+||.||+|.... ...|++|.+.... ......+.+|+.+++.++||||+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv 79 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH--RDIALAFFETASLMSQVSHIHLA 79 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH--HHHHHHHHHHHHHHhcCCCCCee
Confidence 59999999999996421 1357888886432 23345688899999999999999
Q ss_pred ccceEEeecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCC
Q 005001 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE 551 (720)
Q Consensus 472 ~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~ 551 (720)
++++++.+....++||||+++|+|..++.. ..+.+++..+..++.|+++||+|||+. +|+||||||+||+++..
T Consensus 80 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~ 153 (274)
T cd05076 80 FVHGVCVRGSENIMVEEFVEHGPLDVCLRK---EKGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARL 153 (274)
T ss_pred eEEEEEEeCCceEEEEecCCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEecc
Confidence 999999999999999999999999998863 245789999999999999999999998 99999999999999764
Q ss_pred C-------ceEEcccCCCccCCCCCccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHH-hCCCCCCCCCCc
Q 005001 552 L-------NPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELL-TGRKPLDSSRPR 622 (720)
Q Consensus 552 ~-------~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~ell-tg~~pf~~~~~~ 622 (720)
+ .+|++|||.+...... ....++..|+|||.+.+ ..++.++|||||||++|||+ +|+.||....+.
T Consensus 154 ~~~~~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~ 228 (274)
T cd05076 154 GLAEGTSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPS 228 (274)
T ss_pred CcccCccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChH
Confidence 4 3799999987543221 12357788999998876 56899999999999999995 699999754332
Q ss_pred chhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 623 SEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
..... ..... ..+......+.++|.+||+.+|++||++.++++.|
T Consensus 229 ~~~~~-----------------~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 229 EKERF-----------------YEKKH--RLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HHHHH-----------------HHhcc--CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 11110 00010 11222335688999999999999999999999887
No 282
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-38 Score=350.27 Aligned_cols=259 Identities=27% Similarity=0.373 Sum_probs=214.3
Q ss_pred cHHHHhcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCe
Q 005001 404 SLQTATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (720)
Q Consensus 404 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (720)
.+...+-+|+....||.|.||.||.|.. .+|+..|+|.++-..........+.+|+.++..++|||+|+++|+-...+.
T Consensus 1229 ~lsnV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRek 1308 (1509)
T KOG4645|consen 1229 SLSNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREK 1308 (1509)
T ss_pred HhccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHH
Confidence 3555567788899999999999999954 579999999886544344445667899999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCC
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a 562 (720)
.+|.||||++|+|.++++ .++..++.....+..|++.|++|||+. |||||||||.||+++.+|.+|++|||.|
T Consensus 1309 v~IFMEyC~~GsLa~ll~----~gri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa 1381 (1509)
T KOG4645|consen 1309 VYIFMEYCEGGSLASLLE----HGRIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSA 1381 (1509)
T ss_pred HHHHHHHhccCcHHHHHH----hcchhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccce
Confidence 999999999999999997 345567777778899999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCccc---cccccccccccCccccccCC---CcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccc
Q 005001 563 ALTPNTERQV---STQMVGAFGYSAPEFALSGI---YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLH 636 (720)
Q Consensus 563 ~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 636 (720)
....+..... -....||+.|||||++.+.. ...+.||||+||+..||+||+.||...+.
T Consensus 1382 ~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn--------------- 1446 (1509)
T KOG4645|consen 1382 VKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN--------------- 1446 (1509)
T ss_pred eEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc---------------
Confidence 8765543221 23468999999999998754 46789999999999999999999975432
Q ss_pred cHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 637 DIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.+.++.-+-.+-..+.|...+.+-.+++..||+.||++|.++.|++++
T Consensus 1447 -e~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1447 -EWAIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred -hhHHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 223333333344456677788889999999999999999999887765
No 283
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.2e-35 Score=307.24 Aligned_cols=256 Identities=31% Similarity=0.465 Sum_probs=204.3
Q ss_pred HHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEeecC---
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHG--- 481 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~--- 481 (720)
.++++|+..+.||+|+||.||+|... +++.+++|.+.... .....+.+|+.+++++ +|+||+++++++....
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE---DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPG 79 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCC
Confidence 35688999999999999999999875 57889999886443 2346788999999998 7999999999987644
Q ss_pred ---eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcc
Q 005001 482 ---QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSD 558 (720)
Q Consensus 482 ---~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~D 558 (720)
..++||||+++++|.++++........+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d 156 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVD 156 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECC
Confidence 48999999999999999875444457889999999999999999999999 999999999999999999999999
Q ss_pred cCCCccCCCCCccccccccccccccCcccccc-----CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcc
Q 005001 559 CGLAALTPNTERQVSTQMVGAFGYSAPEFALS-----GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATP 633 (720)
Q Consensus 559 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~ 633 (720)
||++....... .......|+..|+|||++.. ..++.++|||||||++|+|++|+.||.........
T Consensus 157 ~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-------- 227 (275)
T cd06608 157 FGVSAQLDSTL-GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRAL-------- 227 (275)
T ss_pred Cccceecccch-hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHH--------
Confidence 99987654322 22234568999999998854 34678999999999999999999999753321111
Q ss_pred ccccHHHHHhhccc-ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 634 QLHDIDALAKMVDP-ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 634 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.++... ......+...+..+.+++.+||..||++|||+.+++++
T Consensus 228 --------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 228 --------FKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred --------HHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 111111 11111223356688999999999999999999999863
No 284
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.5e-35 Score=309.50 Aligned_cols=247 Identities=27% Similarity=0.406 Sum_probs=205.3
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
++|...+.||+|+||.||++.+. +++.||+|.+..... .......+.+|++++++++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 46888999999999999999765 589999999865432 2334567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++++|.++++. ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~~~~----~~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 153 (290)
T cd05580 81 EYVPGGELFSHLRK----SGRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKG 153 (290)
T ss_pred ecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCC
Confidence 99999999999873 46789999999999999999999998 999999999999999999999999999876644
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
. .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||....... ...+....
T Consensus 154 ~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----------------~~~~~~~~ 213 (290)
T cd05580 154 R----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQ----------------IYEKILEG 213 (290)
T ss_pred C----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH----------------HHHHHhcC
Confidence 3 233468999999999998889999999999999999999999997543211 11111111
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRP-----PMSEVVQA 685 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~ell~~ 685 (720)
....+...+..+.+++.+||+.||.+|+ +++|++++
T Consensus 214 --~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 214 --KVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred --CccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence 1123444567889999999999999999 77777755
No 285
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2.1e-35 Score=304.18 Aligned_cols=258 Identities=28% Similarity=0.407 Sum_probs=207.0
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
++|+..+.||.|+||+||+|... ++..+++|++....... ....+.+|+..++.++|+||+++++.+...+..++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 79 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMP 79 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEe
Confidence 46888999999999999999764 67889999986544333 56778999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
++++++|.++++... ....+++..+..++.|++.||+|||+. +++||||+|+||++++++.++|+|||++......
T Consensus 80 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~ 155 (267)
T cd06610 80 YLSGGSLLDIMKSSY-PRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADG 155 (267)
T ss_pred ccCCCcHHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccC
Confidence 999999999997422 135689999999999999999999999 9999999999999999999999999998765543
Q ss_pred Ccc---ccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhh
Q 005001 569 ERQ---VSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKM 644 (720)
Q Consensus 569 ~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (720)
... ......|+..|+|||++... .++.++|+|||||++|||++|+.||......... ..... .
T Consensus 156 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~--~~~~~-----------~ 222 (267)
T cd06610 156 GDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVL--MLTLQ-----------N 222 (267)
T ss_pred ccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhH--HHHhc-----------C
Confidence 322 22334689999999999877 7899999999999999999999999765432111 00000 0
Q ss_pred cccccCCC-CChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 645 VDPALNGM-YPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 645 ~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
........ .....+..+.+++.+||+.||++||++.+++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 223 DPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred CCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00111111 112456778999999999999999999999864
No 286
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.1e-35 Score=309.24 Aligned_cols=259 Identities=24% Similarity=0.406 Sum_probs=202.2
Q ss_pred hhcHHHHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEee
Q 005001 402 VASLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAE 479 (720)
Q Consensus 402 ~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 479 (720)
+..+..+.+.|+..+.||+|+||.||+|.+. +++.+|+|.+... ......+..|+.++.++ +|+||+++++++..
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~---~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 8 LSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT---EDEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC---hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 3344456678999999999999999999774 6888999987543 23345677888888888 79999999998853
Q ss_pred ------cCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCc
Q 005001 480 ------HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN 553 (720)
Q Consensus 480 ------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~ 553 (720)
.+..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+|+||||+||+++.++.
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~ 159 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTK--GNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAE 159 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCC
Confidence 457899999999999999987432 35678888999999999999999999 9999999999999999999
Q ss_pred eEEcccCCCccCCCCCccccccccccccccCccccc-----cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHH
Q 005001 554 PHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFAL-----SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLV 628 (720)
Q Consensus 554 ~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~ 628 (720)
++|+|||++........ ......|++.|+|||.+. +..++.++|||||||++|||++|..||....+.....
T Consensus 160 ~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~-- 236 (282)
T cd06636 160 VKLVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF-- 236 (282)
T ss_pred EEEeeCcchhhhhcccc-CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh--
Confidence 99999999875432221 123356899999999986 3467889999999999999999999996543211110
Q ss_pred HhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 629 RWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
...............+..+.++|.+||+.||.+||++.|++++
T Consensus 237 --------------~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 237 --------------LIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred --------------hHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 0001111111123456789999999999999999999999853
No 287
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.4e-35 Score=303.40 Aligned_cols=252 Identities=24% Similarity=0.387 Sum_probs=210.6
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
+|++.+.||+|+||.||++... +++.+++|.+............+.+|+++++.++|+||+++++++......++|+||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4778889999999999999654 688999999976655555667788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
+++++|.+++.........+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 999999999875444456789999999999999999999999 9999999999999999999999999999776543
Q ss_pred ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccccc
Q 005001 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPAL 649 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (720)
......+++.|+|||.+.+..++.++|+||||+++|||++|+.||........ ........
T Consensus 157 --~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~-----------------~~~~~~~~ 217 (256)
T cd08530 157 --MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDL-----------------RYKVQRGK 217 (256)
T ss_pred --CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-----------------HHHHhcCC
Confidence 22234688899999999999999999999999999999999999975432111 11111111
Q ss_pred CCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 650 NGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 650 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
....+...+.++.+++.+||+.+|++||++.+++++
T Consensus 218 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 218 YPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred CCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 122334566789999999999999999999999864
No 288
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.8e-35 Score=306.84 Aligned_cols=259 Identities=24% Similarity=0.383 Sum_probs=204.5
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec--CeEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQRLLV 486 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lV 486 (720)
++|+..+.||.|++|.||+|... +++.+|+|.+.... .......+.+|++++++++||||+++++++... +..++|
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDP-NPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCC-chHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence 36788899999999999999875 57889999886443 224567788999999999999999999988653 468999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||+++++|.+++.........+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++....
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~ 156 (287)
T cd06621 80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELV 156 (287)
T ss_pred EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccccccc
Confidence 999999999998875444456789999999999999999999999 99999999999999999999999999986543
Q ss_pred CCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCc--chhhHHHhhccccccHHHHHhh
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPR--SEQSLVRWATPQLHDIDALAKM 644 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 644 (720)
... .....++..|+|||.+.+..++.++|||||||++|||++|..||...... .......+.. ..
T Consensus 157 ~~~---~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----------~~ 223 (287)
T cd06621 157 NSL---AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIV----------NM 223 (287)
T ss_pred ccc---cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHh----------cC
Confidence 221 12345788999999999999999999999999999999999999765321 1111111100 00
Q ss_pred cccccCCCCC--hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 645 VDPALNGMYP--AKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 645 ~~~~~~~~~~--~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
..+......+ ...+..+.+++.+||+.+|++||++.|++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 224 PNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred CchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 0011111111 2345678999999999999999999999975
No 289
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1e-35 Score=305.07 Aligned_cols=249 Identities=25% Similarity=0.354 Sum_probs=206.5
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
+|+..+.||+|+||.||+|... +++.||+|.+..... .....+.+.+|++++++++||||+++++++.+....++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4788899999999999999775 589999999975433 22456788999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+.+++|.+++.. ...+++..+..++.|+++||.|||+. +++|+||+|+||++++++.++|+|||.+......
T Consensus 81 ~~~~~~L~~~l~~----~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 153 (258)
T cd05578 81 LLLGGDLRYHLSQ----KVKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPD 153 (258)
T ss_pred CCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCC
Confidence 9999999999863 35789999999999999999999999 9999999999999999999999999998765443
Q ss_pred CccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccc
Q 005001 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPA 648 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (720)
. ......|+..|+|||.+.+..++.++|+||||+++|+|++|..||........... ......
T Consensus 154 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~--------------~~~~~~- 216 (258)
T cd05578 154 T--LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQI--------------RAKQET- 216 (258)
T ss_pred c--cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHH--------------HHHhcc-
Confidence 2 22335688899999999998899999999999999999999999986553211111 111111
Q ss_pred cCCCCChhHHHHHHHHHHHhcCCCCCCCCCH--HHHH
Q 005001 649 LNGMYPAKSLSRFADIIALCVQPEPEFRPPM--SEVV 683 (720)
Q Consensus 649 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~--~ell 683 (720)
.....+...+..+.+++.+||+.||.+||++ +|++
T Consensus 217 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 217 ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 2233455566889999999999999999999 6654
No 290
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=2.3e-35 Score=305.03 Aligned_cols=256 Identities=25% Similarity=0.393 Sum_probs=200.1
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccC--------hHHHHHHHHHHHHhhcCCCCCccccceEEeecC
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS--------LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG 481 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 481 (720)
+|...+.||+|+||.||+|... +|+.||+|.+...... ....+.+.+|+.+++.++||||+++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4677889999999999999654 6889999988532211 112346778999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCC
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 561 (720)
..++||||+++++|.++++. ...+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||+
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~ 154 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRT----YGRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGI 154 (272)
T ss_pred ceEEEEecCCCCcHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeeccc
Confidence 99999999999999999873 35789999999999999999999998 999999999999999999999999999
Q ss_pred CccCCCCCcc-ccccccccccccCccccccCC--CcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccH
Q 005001 562 AALTPNTERQ-VSTQMVGAFGYSAPEFALSGI--YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDI 638 (720)
Q Consensus 562 a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 638 (720)
+......... ......|+..|+|||.+.... ++.++|+||||+++||+++|..||........ ....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~--~~~~-------- 224 (272)
T cd06629 155 SKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAA--MFKL-------- 224 (272)
T ss_pred cccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHH--HHHh--------
Confidence 8765432211 123346889999999988755 78999999999999999999999964322110 0000
Q ss_pred HHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 639 DALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.................+..+.+++.+||..||++||++.+++++
T Consensus 225 --~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 225 --GNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred --hccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 000000011111122346788999999999999999999999865
No 291
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=6.2e-36 Score=306.74 Aligned_cols=238 Identities=25% Similarity=0.444 Sum_probs=188.7
Q ss_pred eeccCCCcEEEEEEEcC--------CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 417 LIGEGSLGRVYRAEFAN--------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 417 ~lG~G~fg~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
.||+|+||.||+|.... ...|++|.+.... ....+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 79 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH--RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQE 79 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchh--HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEe
Confidence 69999999999997642 2347778775432 2344677889999999999999999999999899999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCc--------eEEcccC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN--------PHLSDCG 560 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~--------~kl~Dfg 560 (720)
|+++|+|.++++. ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++. ++++|||
T Consensus 80 ~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g 153 (258)
T cd05078 80 YVKFGSLDTYLKK---NKNLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG 153 (258)
T ss_pred cCCCCcHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEecccc
Confidence 9999999999973 234689999999999999999999999 9999999999999987765 6999999
Q ss_pred CCccCCCCCccccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCC-CCCCCCCCcchhhHHHhhccccccH
Q 005001 561 LAALTPNTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGR-KPLDSSRPRSEQSLVRWATPQLHDI 638 (720)
Q Consensus 561 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~-~pf~~~~~~~~~~~~~~~~~~~~~~ 638 (720)
++...... ....+++.|+|||++.+. .++.++|||||||++|||++|. .||....+.....
T Consensus 154 ~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~------------ 216 (258)
T cd05078 154 ISITVLPK-----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ------------ 216 (258)
T ss_pred cccccCCc-----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHH------------
Confidence 88654321 234678899999999874 5799999999999999999985 5554332211100
Q ss_pred HHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 639 DALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
.... ....+.....++.+++.+||+.||++||+++++++.|
T Consensus 217 -----~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 217 -----FYED--RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred -----HHHc--cccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 0000 1123334456789999999999999999999999886
No 292
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2.2e-35 Score=302.57 Aligned_cols=237 Identities=27% Similarity=0.451 Sum_probs=189.2
Q ss_pred ceeccCCCcEEEEEEEcCCc-----------EEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEE
Q 005001 416 FLIGEGSLGRVYRAEFANGK-----------IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (720)
+.||+|+||.||+|.+.+.. .+++|.+..... ....+.+|+.++++++||||+++++++.. +..+
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 76 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR---DSLAFFETASLMSQLSHKHLVKLYGVCVR-DENI 76 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh---hHHHHHHHHHHHHcCCCcchhheeeEEec-CCcE
Confidence 36999999999999876433 477777654321 15778899999999999999999999887 7789
Q ss_pred EEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCC-------ceEEc
Q 005001 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL-------NPHLS 557 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~-------~~kl~ 557 (720)
+||||+++|+|.++++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+
T Consensus 77 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~ 150 (259)
T cd05037 77 MVEEYVKFGPLDVFLHRE---KNNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLS 150 (259)
T ss_pred EEEEcCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeC
Confidence 999999999999998732 23789999999999999999999998 999999999999999887 79999
Q ss_pred ccCCCccCCCCCccccccccccccccCccccccC--CCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccc
Q 005001 558 DCGLAALTPNTERQVSTQMVGAFGYSAPEFALSG--IYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQ 634 (720)
Q Consensus 558 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 634 (720)
|||++..... .....++..|+|||++.+. .++.++|||||||++|||++ |..||.............
T Consensus 151 Dfg~a~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~----- 220 (259)
T cd05037 151 DPGIPITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ----- 220 (259)
T ss_pred CCCccccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh-----
Confidence 9999876543 1234567789999999877 78999999999999999999 577776543211111000
Q ss_pred cccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 635 LHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
.. ...+......+.+++.+||..+|.+||++.++++.|
T Consensus 221 -----------~~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 221 -----------DQ---HRLPMPDCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred -----------cC---CCCCCCCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 00 001111226788999999999999999999999876
No 293
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=3.8e-35 Score=301.64 Aligned_cols=253 Identities=27% Similarity=0.463 Sum_probs=209.2
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
++|+..+.||+|++|.||+|... +++.|++|++...... .....+.+|+..+.+++|+||+++++++...+..++|+|
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLE 79 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEE
Confidence 36788899999999999999776 4899999998765432 456778999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHE-VCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~-~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
|+++++|.+++.. ...+++..+..++.|+++|++|||+ . +++||||+|+||+++.++.++|+|||.+.....
T Consensus 80 ~~~~~~L~~~l~~----~~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~ 152 (264)
T cd06623 80 YMDGGSLADLLKK----VGKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLEN 152 (264)
T ss_pred ecCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 9999999999963 3678999999999999999999999 8 999999999999999999999999999876643
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
.... .....++..|+|||.+.+..++.++|+||||+++|||++|+.||........... ...+..
T Consensus 153 ~~~~-~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~-------------~~~~~~- 217 (264)
T cd06623 153 TLDQ-CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFEL-------------MQAICD- 217 (264)
T ss_pred CCCc-ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHH-------------HHHHhc-
Confidence 3322 2235688999999999999999999999999999999999999976543111111 111111
Q ss_pred ccCCCCChh-HHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 648 ALNGMYPAK-SLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 648 ~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
......+.. .+..+.+++.+||+.+|++||++.+++++
T Consensus 218 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 218 GPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred CCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 111122333 66789999999999999999999999975
No 294
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2.2e-35 Score=302.28 Aligned_cols=252 Identities=23% Similarity=0.400 Sum_probs=204.5
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
+|...+.||+|+||.||+|... +|..||+|.+............+.+|+++++.++|+||+++++.+...+..++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4778889999999999999765 588899999876544445566788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCc-eEEcccCCCccCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN-PHLSDCGLAALTPNT 568 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~-~kl~Dfg~a~~~~~~ 568 (720)
+++++|.+++... ....+++..+..++.|++.||+|||+. +++|+||||+||++++++. ++|+|||.+......
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 81 CDGGDLMKRINRQ--RGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred CCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence 9999999998632 234679999999999999999999999 9999999999999998864 699999998766433
Q ss_pred CccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccc
Q 005001 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPA 648 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (720)
.. ......|++.|+|||.+.+..++.++|+||||+++|||++|..||........ ..+.....
T Consensus 156 ~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~----------------~~~~~~~~ 218 (257)
T cd08225 156 ME-LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQL----------------VLKICQGY 218 (257)
T ss_pred cc-cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHH----------------HHHHhccc
Confidence 22 22234688999999999988899999999999999999999999975432111 11111111
Q ss_pred cCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 649 LNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 649 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
. ...+...+..+.+++.+||+.+|++||++.+++++
T Consensus 219 ~-~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 219 F-APISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred C-CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 1 11223445678999999999999999999999864
No 295
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.2e-35 Score=310.19 Aligned_cols=248 Identities=28% Similarity=0.401 Sum_probs=200.3
Q ss_pred CCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEec
Q 005001 412 FSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYV 490 (720)
Q Consensus 412 y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 490 (720)
|.....||+|+||.||++... ++..||+|++.... ......+.+|+..++.++|+||+++++.+...+..++||||+
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 101 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK--QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFL 101 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch--HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCC
Confidence 444567999999999999764 68899999886432 334566889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCc
Q 005001 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER 570 (720)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 570 (720)
++++|.+++. .+.+++.++..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++........
T Consensus 102 ~~~~L~~~~~-----~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~ 173 (292)
T cd06658 102 EGGALTDIVT-----HTRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP 173 (292)
T ss_pred CCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc
Confidence 9999999885 35688999999999999999999999 999999999999999999999999999875533221
Q ss_pred cccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccC
Q 005001 571 QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALN 650 (720)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (720)
......|+..|+|||.+.+..++.++||||||+++|||++|+.||.......... ...........
T Consensus 174 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~-------------~~~~~~~~~~~ 239 (292)
T cd06658 174 -KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMR-------------RIRDNLPPRVK 239 (292)
T ss_pred -cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-------------HHHhcCCCccc
Confidence 1233568999999999998889999999999999999999999997543321111 11111111111
Q ss_pred CCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 651 GMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 651 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.....+..+.+++.+||..||++||++++++++
T Consensus 240 --~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 240 --DSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred --cccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 112345578899999999999999999999976
No 296
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=4.9e-35 Score=299.40 Aligned_cols=254 Identities=27% Similarity=0.458 Sum_probs=211.9
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
+|...+.||+|+||.||++.+. +++.|++|++............+.+|+++++.++|||++++.+.+...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4778889999999999999775 688999999976655556677889999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
+++++|.++++........+++..+..++.+++.||.|||+. +++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 999999999975433357899999999999999999999999 99999999999999999999999999987664432
Q ss_pred ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccccc
Q 005001 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPAL 649 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (720)
.......|++.|+|||.+.+..++.++|+||+|+++|+|++|+.||....... ....... ..
T Consensus 158 -~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~----------------~~~~~~~-~~ 219 (258)
T cd08215 158 -DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE----------------LALKILK-GQ 219 (258)
T ss_pred -ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH----------------HHHHHhc-CC
Confidence 22334578999999999999899999999999999999999999997543211 1111111 11
Q ss_pred CCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 650 NGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 650 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
....+...+..+.+++.+||..+|++||++.+++++
T Consensus 220 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 220 YPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 122344566788999999999999999999999864
No 297
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=2.3e-35 Score=306.98 Aligned_cols=268 Identities=22% Similarity=0.309 Sum_probs=201.4
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
+|+..+.||+|+||.||+|... +++.||+|++............+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4778889999999999999765 688999999875544444456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
+. ++|.+++... ....+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+||+|||++.......
T Consensus 81 ~~-~~l~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~ 154 (284)
T cd07860 81 LH-QDLKKFMDAS--PLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 154 (284)
T ss_pred cc-cCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCc
Confidence 96 5899888632 246789999999999999999999999 99999999999999999999999999987553322
Q ss_pred ccccccccccccccCccccccCC-CcccchhhhHHHHHHHHHhCCCCCCCCCCcchh-hHHHhhccccccH----HHHH-
Q 005001 570 RQVSTQMVGAFGYSAPEFALSGI-YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQ-SLVRWATPQLHDI----DALA- 642 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~-~~~~~~~~~~~~~----~~~~- 642 (720)
. ......+++.|+|||.+.+.. ++.++||||||+++|||+||+.||......... ............. ....
T Consensus 155 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07860 155 R-TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPD 233 (284)
T ss_pred c-ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHH
Confidence 1 122335788999999887654 588999999999999999999999754432111 1111111000000 0000
Q ss_pred --hhcccccCC---CCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 643 --KMVDPALNG---MYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 643 --~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
......... ......+..+.+++.+||+.||++||++++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 234 YKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred HHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 000000000 0011234567899999999999999999999864
No 298
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=4.8e-35 Score=306.89 Aligned_cols=267 Identities=25% Similarity=0.312 Sum_probs=201.9
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccC---hHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS---LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
+|...+.||+|+||.||+|... +++.||+|++...... ......+..|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4777889999999999999765 6899999999765433 22345677899999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||+ +++|.++++.. ...+++..+..++.||++||+|||+. +|+|+||||+||+++.++.++|+|||++....
T Consensus 81 ~e~~-~~~L~~~i~~~---~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~ 153 (298)
T cd07841 81 FEFM-ETDLEKVIKDK---SIVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFG 153 (298)
T ss_pred Eccc-CCCHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeecc
Confidence 9999 88999999631 23789999999999999999999999 99999999999999999999999999997665
Q ss_pred CCCccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHH-Hhh-ccccccHHH---
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLV-RWA-TPQLHDIDA--- 640 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~-~~~-~~~~~~~~~--- 640 (720)
..... .....+++.|+|||.+.+ ..++.++|||||||++|||++|..||....+......+ ... .+.......
T Consensus 154 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (298)
T cd07841 154 SPNRK-MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTS 232 (298)
T ss_pred CCCcc-ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccc
Confidence 43222 122356788999998865 45789999999999999999998888755432211111 100 000000000
Q ss_pred HHhhcccccCCC-----CChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 641 LAKMVDPALNGM-----YPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 641 ~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
............ .....+..+.+++.+||+.||++||+++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 233 LPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 000000000000 112345678999999999999999999999975
No 299
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=3e-35 Score=307.27 Aligned_cols=267 Identities=22% Similarity=0.311 Sum_probs=198.0
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
++|+..+.||+|+||.||+|... +++.||+|.+...... .....+.+|++++++++|+||+++++++...+..++|||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE-GAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE 83 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc-CCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence 57888999999999999999775 6889999998654321 223456789999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+.+ +|.+++.. ....+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 84 ~~~~-~L~~~~~~---~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 156 (291)
T cd07844 84 YLDT-DLKQYMDD---CGGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVP 156 (291)
T ss_pred cCCC-CHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCC
Confidence 9985 99998863 234789999999999999999999999 9999999999999999999999999998754322
Q ss_pred CccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhh---
Q 005001 569 ERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKM--- 644 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 644 (720)
.. ......++..|+|||++.+ ..++.++||||+|+++|||++|+.||.............+..............
T Consensus 157 ~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (291)
T cd07844 157 SK-TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSN 235 (291)
T ss_pred Cc-cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhc
Confidence 11 1122356889999999876 458899999999999999999999997554221111000000000000000000
Q ss_pred ---cc--------cccCCCC-ChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 645 ---VD--------PALNGMY-PAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 645 ---~~--------~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.. ....... .......+.+++.+||+.||++||++.|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 236 PEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred cccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 00 0000000 01112567899999999999999999998853
No 300
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.6e-35 Score=309.64 Aligned_cols=268 Identities=24% Similarity=0.332 Sum_probs=203.5
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec--CeEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQRLLV 486 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lV 486 (720)
++|+..+.||+|+||.||+|... +++.+++|.++...........+.+|+.++++++||||+++++++... +..++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46888899999999999999876 588999999975543333344667899999999999999999998877 889999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
+||+++ +|.+++... ...+++.++..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++....
T Consensus 85 ~e~~~~-~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 85 MEYVEH-DLKSLMETM---KQPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYG 157 (293)
T ss_pred ehhcCc-CHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeecc
Confidence 999975 999988632 34689999999999999999999999 99999999999999999999999999988665
Q ss_pred CCCccccccccccccccCccccccCC-CcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHH-Hh-hccccccHHHHHh
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSGI-YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLV-RW-ATPQLHDIDALAK 643 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~-~~-~~~~~~~~~~~~~ 643 (720)
..... .....+++.|+|||.+.+.. ++.++|+||||+++|||++|+.||...........+ .. ..+....+.....
T Consensus 158 ~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (293)
T cd07843 158 SPLKP-YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSE 236 (293)
T ss_pred CCccc-cccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhc
Confidence 43221 22345788999999987654 689999999999999999999999865443222111 10 0000000000000
Q ss_pred -----------hcccccCCCCChh-HHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 644 -----------MVDPALNGMYPAK-SLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 644 -----------~~~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.........++.. .+..+.+++++||+.||++||++.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 237 LPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred cchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0000111122222 46678899999999999999999999864
No 301
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=3.7e-35 Score=308.74 Aligned_cols=254 Identities=22% Similarity=0.313 Sum_probs=200.3
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccC-hHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
++|+..+.||+|+||.||++... .++.|++|.+...... ......+.+|+.+++.++||||+++++.+..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 46888899999999999999775 5788999988754322 233567788999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++++|.++++. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||+++....
T Consensus 81 e~~~g~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~ 153 (305)
T cd05609 81 EYVEGGDCATLLKN----IGALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLM 153 (305)
T ss_pred ecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCc
Confidence 99999999999963 35689999999999999999999999 999999999999999999999999998863211
Q ss_pred CC--------------ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcc
Q 005001 568 TE--------------RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATP 633 (720)
Q Consensus 568 ~~--------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~ 633 (720)
.. ........|+..|+|||.+.+..++.++|+|||||++|||++|..||.+......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~--------- 224 (305)
T cd05609 154 SLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEEL--------- 224 (305)
T ss_pred CccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---------
Confidence 00 0011124578899999999988899999999999999999999999975432111
Q ss_pred ccccHHHHHhhcccccCC-CCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 634 QLHDIDALAKMVDPALNG-MYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
..+........ ..+...+..+.+++.+||+.||++||++.++.+.|
T Consensus 225 -------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll 271 (305)
T cd05609 225 -------FGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVK 271 (305)
T ss_pred -------HHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHH
Confidence 11111111110 11123566789999999999999999965555444
No 302
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2.2e-35 Score=312.37 Aligned_cols=262 Identities=23% Similarity=0.357 Sum_probs=188.8
Q ss_pred ceeccCCCcEEEEEEEc---CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEee--cCeEEEEEEec
Q 005001 416 FLIGEGSLGRVYRAEFA---NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE--HGQRLLVYEYV 490 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lV~e~~ 490 (720)
.+||+|+||.||+|... ++..||+|.+..... ...+.+|+.+++.++||||+++++++.. +...++|+||+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI----SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYA 82 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC----cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeee
Confidence 47999999999999865 357899998865432 2456789999999999999999998854 45789999998
Q ss_pred CCCCHHHHhhhccC-----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEe----CCCCceEEcccCC
Q 005001 491 GNGNLHDMLHFADD-----SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL----DDELNPHLSDCGL 561 (720)
Q Consensus 491 ~~gsL~~~l~~~~~-----~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll----~~~~~~kl~Dfg~ 561 (720)
.+ +|.+++..... ....+++..+..++.|++.||.|||+. +|+||||||+||++ +.++.+||+|||+
T Consensus 83 ~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07867 83 EH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred CC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence 75 88887753221 223588999999999999999999999 99999999999999 5667899999999
Q ss_pred CccCCCCCcc--ccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcch-------hhHH---
Q 005001 562 AALTPNTERQ--VSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSE-------QSLV--- 628 (720)
Q Consensus 562 a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~-------~~~~--- 628 (720)
++........ ......||+.|+|||++.+. .++.++|||||||++|||+||+.||........ ....
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~ 238 (317)
T cd07867 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIF 238 (317)
T ss_pred eeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHH
Confidence 9866433221 12345789999999999774 579999999999999999999999975432110 0000
Q ss_pred H-hhccccccHHHHHh---------hcccc-c--------CCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 629 R-WATPQLHDIDALAK---------MVDPA-L--------NGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 629 ~-~~~~~~~~~~~~~~---------~~~~~-~--------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
. ...+....+....+ ..... . ...........+.+|+.+||+.||.+|||++|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~h 314 (317)
T cd07867 239 SVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQD 314 (317)
T ss_pred HhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcC
Confidence 0 00000000000000 00000 0 000011123457889999999999999999999864
No 303
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=5.1e-35 Score=303.28 Aligned_cols=248 Identities=25% Similarity=0.420 Sum_probs=203.7
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
-|+..+.||+|+||.||+|... +++.||+|.+..... ......+.+|+..+++++||||+++++++..++..++||||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc-hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence 4677889999999999999764 688999998864432 33456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
+++++|.+++. ...+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~l~~~i~-----~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06641 84 LGGGSALDLLE-----PGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 155 (277)
T ss_pred CCCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccch
Confidence 99999999986 35689999999999999999999998 99999999999999999999999999987654322
Q ss_pred ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccccc
Q 005001 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPAL 649 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (720)
.......|+..|+|||.+.+..++.++|+|||||++|+|++|..||.......... . +....
T Consensus 156 -~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~----------------~-~~~~~ 217 (277)
T cd06641 156 -IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLF----------------L-IPKNN 217 (277)
T ss_pred -hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHH----------------H-HhcCC
Confidence 11223468889999999998889999999999999999999999997543211110 0 01111
Q ss_pred CCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 650 NGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 650 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
....+...+..+.+++.+||+.+|.+||++.+++++
T Consensus 218 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 218 PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred CCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 112233456778899999999999999999999986
No 304
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.9e-35 Score=328.76 Aligned_cols=277 Identities=16% Similarity=0.202 Sum_probs=195.0
Q ss_pred HHHHhcCCCccceeccCCCcEEEEEEEcC--CcEEEEEEc--------------cc-cccChHHHHHHHHHHHHhhcCCC
Q 005001 405 LQTATNSFSQEFLIGEGSLGRVYRAEFAN--GKIMAVKKI--------------DN-AALSLQEEDNFLEAVSNMSRLRH 467 (720)
Q Consensus 405 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~~--------------~~-~~~~~~~~~~~~~e~~~l~~l~h 467 (720)
.....++|++.+.||+|+||+||++..+. +..++.|.+ .+ ..........+.+|+.++++++|
T Consensus 143 ~~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~H 222 (501)
T PHA03210 143 DDEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNH 222 (501)
T ss_pred chhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCC
Confidence 34456789999999999999999986542 222222211 00 01122234567899999999999
Q ss_pred CCccccceEEeecCeEEEEEEecCCCCHHHHhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCE
Q 005001 468 PNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD-SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANI 546 (720)
Q Consensus 468 ~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NI 546 (720)
|||+++++++...+..|+|+|++.+ +|.+++..... ........++..++.|++.||+|||+. +||||||||+||
T Consensus 223 pnIv~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NI 298 (501)
T PHA03210 223 ENILKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENI 298 (501)
T ss_pred CCcCcEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHE
Confidence 9999999999999999999999864 77777642211 122344667888999999999999999 999999999999
Q ss_pred EeCCCCceEEcccCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCC-CCCCCCcchh
Q 005001 547 LLDDELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKP-LDSSRPRSEQ 625 (720)
Q Consensus 547 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~p-f~~~~~~~~~ 625 (720)
|++.++.+||+|||++...............||+.|+|||++.+..++.++|||||||++|||++|..+ +.........
T Consensus 299 Ll~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~ 378 (501)
T PHA03210 299 FLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGK 378 (501)
T ss_pred EECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHH
Confidence 999999999999999987654433334456799999999999999999999999999999999998764 4333222111
Q ss_pred hHHHhhc------ccccc-HHHHHhhcccccC----CCC-----ChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 626 SLVRWAT------PQLHD-IDALAKMVDPALN----GMY-----PAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 626 ~~~~~~~------~~~~~-~~~~~~~~~~~~~----~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.+..... ..+.. ...+...++.... ... ....+..+.+++.+||+.||++||++.|++++
T Consensus 379 ~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 379 QLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 1111100 00000 0011111110000 000 01133467788999999999999999999975
No 305
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-35 Score=332.51 Aligned_cols=268 Identities=28% Similarity=0.473 Sum_probs=223.3
Q ss_pred HHHHhcCCCccceeccCCCcEEEEEEEc----C----CcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccce
Q 005001 405 LQTATNSFSQEFLIGEGSLGRVYRAEFA----N----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAG 475 (720)
Q Consensus 405 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~----~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~ 475 (720)
++...++..+.+.||+|.||.|++|... . ...||||..+..... .+.+.+..|+++|..+ +|+||+.++|
T Consensus 291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG 369 (609)
T KOG0200|consen 291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLLG 369 (609)
T ss_pred eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhhee
Confidence 3334444455669999999999999643 1 457999999877655 7788899999999998 6999999999
Q ss_pred EEeecCeEEEEEEecCCCCHHHHhhhcc---C-------CC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCC
Q 005001 476 YCAEHGQRLLVYEYVGNGNLHDMLHFAD---D-------SS--KNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKS 543 (720)
Q Consensus 476 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~---~-------~~--~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp 543 (720)
++...+..++|+||+..|+|.++++..+ . .. ..++..+...++.|||.|++||++. ++|||||.+
T Consensus 370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAa 446 (609)
T KOG0200|consen 370 ACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAA 446 (609)
T ss_pred eeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchhhhh
Confidence 9999999999999999999999998655 0 01 2389999999999999999999999 999999999
Q ss_pred CCEEeCCCCceEEcccCCCccCCCCCccccccccc--cccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCC
Q 005001 544 ANILLDDELNPHLSDCGLAALTPNTERQVSTQMVG--AFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSR 620 (720)
Q Consensus 544 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~ 620 (720)
+|||+.++..+||+|||+++..............| +..|||||.+....|+.++|||||||++||++| |..||.+..
T Consensus 447 RNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~ 526 (609)
T KOG0200|consen 447 RNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP 526 (609)
T ss_pred hhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC
Confidence 99999999999999999999766555444333333 456999999999999999999999999999999 999997522
Q ss_pred CcchhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHh
Q 005001 621 PRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQR 692 (720)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~ 692 (720)
. ...+.+.+..+.+...|..+..+++++|+.||+.+|++||++.++.+.++.++..
T Consensus 527 ~----------------~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~~ 582 (609)
T KOG0200|consen 527 P----------------TEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQD 582 (609)
T ss_pred c----------------HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHHH
Confidence 1 1222334556667778889999999999999999999999999999999997653
No 306
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=7e-35 Score=306.99 Aligned_cols=250 Identities=28% Similarity=0.433 Sum_probs=200.8
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
..+.|+..+.||+|+||.||+|... +++.||+|++..... .......+.+|+.+++.++||||+++.+++...+..++
T Consensus 13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~l 92 (307)
T cd06607 13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWL 92 (307)
T ss_pred cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEE
Confidence 3456888899999999999999765 689999998864332 33445678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
|+||+. |++.+++.. ....+++..+..++.|++.||.|||+. +|+||||+|+||+++.++.++|+|||++...
T Consensus 93 v~e~~~-g~l~~~~~~---~~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~ 165 (307)
T cd06607 93 VMEYCL-GSASDILEV---HKKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLV 165 (307)
T ss_pred EHHhhC-CCHHHHHHH---cccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceec
Confidence 999997 577777653 235689999999999999999999999 9999999999999999999999999998755
Q ss_pred CCCCccccccccccccccCccccc---cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFAL---SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
... ....|++.|+|||++. ...++.++||||||+++|||++|+.||..........
T Consensus 166 ~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~---------------- 224 (307)
T cd06607 166 SPA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY---------------- 224 (307)
T ss_pred CCC-----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHH----------------
Confidence 332 2346888999999885 4568899999999999999999999997543211110
Q ss_pred hhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 643 KMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
...........+...+..+.+++.+||+.||++||++.+++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 225 HIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred HHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0000011111123356678999999999999999999999875
No 307
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=5.6e-35 Score=302.90 Aligned_cols=249 Identities=27% Similarity=0.465 Sum_probs=200.2
Q ss_pred CCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCC---CCCccccceEEeecCeEEEE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR---HPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lV 486 (720)
.|+..+.||+|+||.||+|.+ .+++.||+|.+.... .......+.+|+.++++++ |||++++++++......++|
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv 80 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT-PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWII 80 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC-CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEE
Confidence 477788999999999999976 468999999886543 2334566788888888886 99999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||+++++|.++++ ...+++..+..++.|++.||.|||+. +|+|+||+|+||+++.++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~~~-----~~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06917 81 MEYAEGGSVRTLMK-----AGPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLN 152 (277)
T ss_pred EecCCCCcHHHHHH-----ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecC
Confidence 99999999999886 24789999999999999999999999 99999999999999999999999999987765
Q ss_pred CCCccccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
.... ......|+..|+|||.+.++ .++.++|||||||++|+|++|..||........... .....
T Consensus 153 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~-------------~~~~~ 218 (277)
T cd06917 153 QNSS-KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMML-------------IPKSK 218 (277)
T ss_pred CCcc-ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhc-------------cccCC
Confidence 4332 22335689999999998754 468999999999999999999999975432111100 00000
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.+... ....+.++.+++.+||+.||++||++.+++++
T Consensus 219 ~~~~~---~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 219 PPRLE---DNGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred CCCCC---cccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 01111 11245678899999999999999999999874
No 308
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=5.9e-35 Score=300.16 Aligned_cols=244 Identities=23% Similarity=0.344 Sum_probs=201.4
Q ss_pred eccCCCcEEEEEEEc-CCcEEEEEEccccccC-hHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecCCCCH
Q 005001 418 IGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNL 495 (720)
Q Consensus 418 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 495 (720)
||.|+||.||+|... +++.||+|.+...... ......+.+|+.+++.++||||+++++++.+....++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999775 4889999998754432 33456788999999999999999999999999999999999999999
Q ss_pred HHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCcccccc
Q 005001 496 HDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQ 575 (720)
Q Consensus 496 ~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 575 (720)
.+++.. ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++....... ....
T Consensus 81 ~~~l~~----~~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~ 151 (262)
T cd05572 81 WTILRD----RGLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWT 151 (262)
T ss_pred HHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--cccc
Confidence 999973 34689999999999999999999998 99999999999999999999999999988665432 2233
Q ss_pred ccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCCCh
Q 005001 576 MVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPA 655 (720)
Q Consensus 576 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (720)
..|++.|++||.+.+..++.++|+||+|+++|+|++|..||....... .....++........++.
T Consensus 152 ~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--------------~~~~~~~~~~~~~~~~~~ 217 (262)
T cd05572 152 FCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP--------------MEIYNDILKGNGKLEFPN 217 (262)
T ss_pred ccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH--------------HHHHHHHhccCCCCCCCc
Confidence 468899999999998889999999999999999999999997654211 111222222222334455
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCC-----HHHHHH
Q 005001 656 KSLSRFADIIALCVQPEPEFRPP-----MSEVVQ 684 (720)
Q Consensus 656 ~~~~~l~~li~~cl~~dP~~RPs-----~~ell~ 684 (720)
..+..+.+++.+||+.||++||+ ++|+++
T Consensus 218 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 218 YIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred ccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 55778999999999999999999 677665
No 309
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=4.7e-35 Score=306.02 Aligned_cols=251 Identities=26% Similarity=0.407 Sum_probs=204.6
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
..+|...+.||+|+||.||++... +++.|++|.+.... ....+.+.+|+.+++.++||||+++++++...+..++|+
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~ 95 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVM 95 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc--chHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEE
Confidence 467888999999999999999754 67889999985432 223466888999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++++|.+++. ...+++.++..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++.....
T Consensus 96 e~~~~~~L~~~~~-----~~~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~ 167 (293)
T cd06647 96 EYLAGGSLTDVVT-----ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 167 (293)
T ss_pred ecCCCCcHHHHHh-----hcCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceecccc
Confidence 9999999999986 34678999999999999999999999 999999999999999999999999998875543
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
... ......|++.|+|||.+.+..++.++||||||+++||+++|+.||............ ...+
T Consensus 168 ~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~---------------~~~~ 231 (293)
T cd06647 168 EQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI---------------ATNG 231 (293)
T ss_pred ccc-ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeeh---------------hcCC
Confidence 322 223346889999999999888999999999999999999999999764432111000 0001
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
......+...+..+.+++.+||..+|++||++.+++++
T Consensus 232 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 232 TPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11111233345678899999999999999999999976
No 310
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=3.3e-35 Score=307.77 Aligned_cols=247 Identities=26% Similarity=0.346 Sum_probs=199.5
Q ss_pred CccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecC
Q 005001 413 SQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVG 491 (720)
Q Consensus 413 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 491 (720)
+....||+|+||.||+|... +++.||+|.+.... ......+.+|+.+++.++||||+++++++...+..++|+||++
T Consensus 24 ~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~ 101 (297)
T cd06659 24 ENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK--QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQ 101 (297)
T ss_pred HhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc--cchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCC
Confidence 33447999999999999764 68899999986433 2234567889999999999999999999999999999999999
Q ss_pred CCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCcc
Q 005001 492 NGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571 (720)
Q Consensus 492 ~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 571 (720)
+++|.+++. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++....... .
T Consensus 102 ~~~L~~~~~-----~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~-~ 172 (297)
T cd06659 102 GGALTDIVS-----QTRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-P 172 (297)
T ss_pred CCCHHHHHh-----hcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhccccc-c
Confidence 999999875 35689999999999999999999999 99999999999999999999999999987554322 1
Q ss_pred ccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCC
Q 005001 572 VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNG 651 (720)
Q Consensus 572 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (720)
......|+..|+|||++.+..++.++|||||||++|||++|+.||....+......+ .... ....
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------------~~~~--~~~~ 237 (297)
T cd06659 173 KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRL-------------RDSP--PPKL 237 (297)
T ss_pred cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-------------hccC--CCCc
Confidence 223456899999999999989999999999999999999999999754322111100 0000 0011
Q ss_pred CCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 652 MYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 652 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
......+..+.+++.+||+.+|++||++++++++
T Consensus 238 ~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 238 KNAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred cccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 1122345678899999999999999999999986
No 311
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-35 Score=313.05 Aligned_cols=253 Identities=25% Similarity=0.397 Sum_probs=216.7
Q ss_pred HHHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEE
Q 005001 406 QTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (720)
Q Consensus 406 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (720)
+.....|.+...||+|.|++|.+|.+. ++..||||.+.+..........+.+|+++|..++|||||+++.+...+..+|
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ly 131 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLY 131 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeE
Confidence 334567899999999999999999764 6899999999988877777677899999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
+||||+.+|.+++++. ..+...+..+..++.|+.+|++|||++ .|||||||++|||++.+..+||+|||++..
T Consensus 132 lV~eya~~ge~~~yl~----~~gr~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~ 204 (596)
T KOG0586|consen 132 LVMEYASGGELFDYLV----KHGRMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTF 204 (596)
T ss_pred EEEEeccCchhHHHHH----hcccchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeecccccee
Confidence 9999999999999997 356777799999999999999999999 999999999999999999999999999987
Q ss_pred CCCCCccccccccccccccCccccccCCC-cccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHh
Q 005001 565 TPNTERQVSTQMVGAFGYSAPEFALSGIY-TVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAK 643 (720)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (720)
+.. ......++|++.|.|||++.+..| ++.+|+||+|+++|-|+.|..||++..-.... .+
T Consensus 205 ~~~--~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr----------------~r 266 (596)
T KOG0586|consen 205 FDY--GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELR----------------PR 266 (596)
T ss_pred ecc--cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccccc----------------ch
Confidence 753 334566899999999999999887 58899999999999999999999975432211 12
Q ss_pred hcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 644 MVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 644 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.+...++- |.....+..++|++++-.+|.+|++.+++.+.
T Consensus 267 vl~gk~rI--p~~ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 267 VLRGKYRI--PFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred heeeeecc--cceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence 22223332 33344566799999999999999999999876
No 312
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=6.3e-35 Score=313.50 Aligned_cols=266 Identities=20% Similarity=0.282 Sum_probs=202.6
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec------
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH------ 480 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 480 (720)
..++|+..+.||+|+||.||+|... +++.||+|.+............+.+|+.++++++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4578999999999999999999765 689999999875544444556778899999999999999999987543
Q ss_pred CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccC
Q 005001 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (720)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 560 (720)
...++||||+.+ +|.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~------~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg 163 (353)
T cd07850 94 QDVYLVMELMDA-NLCQVIQ------MDLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 163 (353)
T ss_pred CcEEEEEeccCC-CHHHHHh------hcCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCc
Confidence 357999999965 8888775 2288999999999999999999999 99999999999999999999999999
Q ss_pred CCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhh-HHHh-hccccccH
Q 005001 561 LAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQS-LVRW-ATPQLHDI 638 (720)
Q Consensus 561 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~-~~~~-~~~~~~~~ 638 (720)
+++...... ......++..|+|||.+.+..++.++|||||||++|+|++|+.||...+...... .... ..+...-.
T Consensus 164 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 241 (353)
T cd07850 164 LARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFM 241 (353)
T ss_pred cceeCCCCC--CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 997654322 1233468899999999999999999999999999999999999997654321111 1100 00000000
Q ss_pred HH-------------------HHhhcccc----cCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 639 DA-------------------LAKMVDPA----LNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 639 ~~-------------------~~~~~~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.. ..+..... .....+...+..+.+++.+||+.||++||++.|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 242 SRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 00000000 0000112345678899999999999999999999976
No 313
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=6.3e-35 Score=304.88 Aligned_cols=268 Identities=21% Similarity=0.274 Sum_probs=198.1
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
+++|...+.||+|+||.||+|... +++.||+|.+..... ......+.+|+++++.++|+||+++++++...+..++|+
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE-EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc-CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 467889999999999999999764 688999999865432 222345678999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+. ++|.+++.. ....+.+..+..++.|++.||+|||+. +|+|+||||+||+++.++.++|+|||+++....
T Consensus 83 e~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 155 (291)
T cd07870 83 EYMH-TDLAQYMIQ---HPGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSI 155 (291)
T ss_pred eccc-CCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCC
Confidence 9996 677776642 234578888999999999999999999 999999999999999999999999999875433
Q ss_pred CCccccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHH---HHH-
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDID---ALA- 642 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~---~~~- 642 (720)
... ......+++.|+|||.+.+. .++.++|||||||++|||++|..||.............+......... ...
T Consensus 156 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (291)
T cd07870 156 PSQ-TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSK 234 (291)
T ss_pred CCC-CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhh
Confidence 221 12234578999999998764 478899999999999999999999976543211111111100000000 000
Q ss_pred --hhcccccCCCCC---------hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 643 --KMVDPALNGMYP---------AKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 643 --~~~~~~~~~~~~---------~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+..........+ ...+..+.+++.+|+..||++|||++|++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 235 LPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred cccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 000000000000 0124567899999999999999999998753
No 314
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1.8e-36 Score=292.21 Aligned_cols=274 Identities=24% Similarity=0.326 Sum_probs=207.7
Q ss_pred hcCCCccceeccCCCcEEEEEEEcC-----CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEee-cCe
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFAN-----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE-HGQ 482 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~ 482 (720)
...|+....||+|.||.||+|.-++ .+.+|+|+++.............+|+.+++.++||||+.+..++-+ +..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 3468889999999999999994432 3368999998664433344567799999999999999999999877 778
Q ss_pred EEEEEEecCCCCHHHHhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCC----CceEEc
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSS-KNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE----LNPHLS 557 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~----~~~kl~ 557 (720)
.++++||.+. +|...|++.+... ..++...++.|+.||+.|+.|||++ =|+||||||.|||+..+ |.+||+
T Consensus 103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKIa 178 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKIA 178 (438)
T ss_pred EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEee
Confidence 8999999987 9999998766533 4688899999999999999999999 79999999999999887 899999
Q ss_pred ccCCCccCCCCCccc--cccccccccccCccccccCC-CcccchhhhHHHHHHHHHhCCCCCCCCCCcch-------h--
Q 005001 558 DCGLAALTPNTERQV--STQMVGAFGYSAPEFALSGI-YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSE-------Q-- 625 (720)
Q Consensus 558 Dfg~a~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~-------~-- 625 (720)
|||+++.+.+..... ....+-|..|+|||++.+.+ ||.++||||.|||+.||+|-.+-|.+...... .
T Consensus 179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl 258 (438)
T KOG0666|consen 179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQL 258 (438)
T ss_pred cccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHH
Confidence 999999886654332 34567899999999999854 89999999999999999999988875432211 1
Q ss_pred hHH--HhhccccccHHHHHhhccc-----ccC-CC-CCh----------hHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 626 SLV--RWATPQLHDIDALAKMVDP-----ALN-GM-YPA----------KSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 626 ~~~--~~~~~~~~~~~~~~~~~~~-----~~~-~~-~~~----------~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
..+ ....|...++..+.++-+- .++ .. .+. .-+....+|+.++|+.||.+|.|+++.+++.
T Consensus 259 ~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~ 338 (438)
T KOG0666|consen 259 DRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHP 338 (438)
T ss_pred HHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccc
Confidence 111 1122333333332222110 000 00 000 0112367999999999999999999999774
No 315
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=8.8e-35 Score=310.41 Aligned_cols=269 Identities=25% Similarity=0.359 Sum_probs=202.3
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEeec--CeE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEH--GQR 483 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~--~~~ 483 (720)
..++|+..+.||+|+||.||+|.+. +++.+|+|++............+.+|+.+++++ +||||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 4567888999999999999999765 588999999865433334455677899999999 999999999988654 368
Q ss_pred EEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
++||||++ ++|.++++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 85 ~lv~e~~~-~~L~~~~~-----~~~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~ 155 (337)
T cd07852 85 YLVFEYME-TDLHAVIR-----ANILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLAR 155 (337)
T ss_pred EEEecccc-cCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchh
Confidence 99999997 49998886 23788999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCCcc----ccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcccc--c
Q 005001 564 LTPNTERQ----VSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQL--H 636 (720)
Q Consensus 564 ~~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~--~ 636 (720)
........ ......||..|+|||.+.+ ..++.++||||||+++|||++|+.||...........+....... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07852 156 SLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAE 235 (337)
T ss_pred ccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 65443221 2233568999999998865 457899999999999999999999997654332211111110000 0
Q ss_pred cHHH-----HHhhcc----cccC--CCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 637 DIDA-----LAKMVD----PALN--GMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 637 ~~~~-----~~~~~~----~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.... ...+.+ .... .......+.++.+++.+||+.||++||++.+++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 236 DIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0000 000010 0000 00011246678999999999999999999999976
No 316
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.5e-34 Score=295.77 Aligned_cols=253 Identities=28% Similarity=0.403 Sum_probs=210.5
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec--CeEEEEE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQRLLVY 487 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lV~ 487 (720)
+|...+.||+|++|.||+|... +++.|++|++..........+.+.+|+..+++++||||+++++.+... +..++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4677889999999999999876 688999999876654455678889999999999999999999999888 8899999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++++|.+++.. ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.+.....
T Consensus 81 e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 153 (260)
T cd06606 81 EYVSGGSLSSLLKK----FGKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGD 153 (260)
T ss_pred EecCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEeccc
Confidence 99999999999873 33889999999999999999999998 999999999999999999999999999887654
Q ss_pred CCcc-ccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 568 TERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 568 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
.... ......++..|+|||.+.+...+.++||||||+++|+|++|..||....... ....+...
T Consensus 154 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---------------~~~~~~~~ 218 (260)
T cd06606 154 IETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPM---------------AALYKIGS 218 (260)
T ss_pred ccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH---------------HHHHhccc
Confidence 4321 1233568899999999999889999999999999999999999997654110 11111111
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.......+...+..+.+++.+|++.||++||++.+++++
T Consensus 219 ~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 219 SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 122233455567889999999999999999999999864
No 317
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=9e-35 Score=302.38 Aligned_cols=267 Identities=23% Similarity=0.294 Sum_probs=200.5
Q ss_pred CCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEec
Q 005001 412 FSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYV 490 (720)
Q Consensus 412 y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 490 (720)
|+..+.||+|++|.||+|... +|..||+|++............+.+|+++++.++|||++++++++.+.+..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 567789999999999999764 7999999998755433334466788999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCc
Q 005001 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER 570 (720)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 570 (720)
+ ++|.+++.... ...+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++|+|||++........
T Consensus 81 ~-~~l~~~~~~~~--~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~ 154 (283)
T cd07835 81 D-LDLKKYMDSSP--LTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR 154 (283)
T ss_pred C-cCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc
Confidence 5 68999886321 24689999999999999999999998 999999999999999999999999999876533221
Q ss_pred cccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhh-HHHhhccccccH-------HHH
Q 005001 571 QVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQS-LVRWATPQLHDI-------DAL 641 (720)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~-~~~~~~~~~~~~-------~~~ 641 (720)
. .....++..|+|||++.+. .++.++||||||+++|||++|+.||.......... ............ ...
T Consensus 155 ~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd07835 155 T-YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDY 233 (283)
T ss_pred c-cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhh
Confidence 1 1223568899999988764 47899999999999999999999997654321111 111100000000 000
Q ss_pred Hhhccc---ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 642 AKMVDP---ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 642 ~~~~~~---~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
...... ..........+..+.+++.+||+.||++||+++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 234 KPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred hhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000000 00001122344678899999999999999999999864
No 318
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=316.91 Aligned_cols=275 Identities=24% Similarity=0.361 Sum_probs=210.7
Q ss_pred CCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecC------eEE
Q 005001 412 FSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG------QRL 484 (720)
Q Consensus 412 y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~ 484 (720)
|...+.||+|+||.||+|++ .+|+.||||.+.... .....+...+|++++++++|+|||+++++-++.. ...
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~-~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES-SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhc-ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 55677899999999999985 579999999998655 4556788899999999999999999999865543 568
Q ss_pred EEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeC--CCCc--eEEcccC
Q 005001 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD--DELN--PHLSDCG 560 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~--~~~~--~kl~Dfg 560 (720)
+|||||.+|||+..++..+ ....+++.+.+.++.++..||.|||++ +||||||||.||++- ++|+ .||+|||
T Consensus 94 lvmEyC~gGsL~~~L~~PE-N~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG 169 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPE-NAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFG 169 (732)
T ss_pred EEEeecCCCcHHHHhcCcc-cccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeeccc
Confidence 9999999999999998543 346799999999999999999999998 999999999999983 3343 6999999
Q ss_pred CCccCCCCCccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHH
Q 005001 561 LAALTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDID 639 (720)
Q Consensus 561 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 639 (720)
.|+...+.. .....+||+.|++||++.. +.|+..+|.|||||++|+.+||..||...........+.|..-... ..
T Consensus 170 ~Arel~d~s--~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkk-p~ 246 (732)
T KOG4250|consen 170 AARELDDNS--LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKK-PS 246 (732)
T ss_pred ccccCCCCC--eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccC-CC
Confidence 999876543 5677899999999999995 8889999999999999999999999975443311111111100000 00
Q ss_pred HHHhhccccc--------CCCCC----hhHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHHHHHhhc
Q 005001 640 ALAKMVDPAL--------NGMYP----AKSLSRFADIIALCVQPEPEFRP--PMSEVVQALVRLVQRAS 694 (720)
Q Consensus 640 ~~~~~~~~~~--------~~~~~----~~~~~~l~~li~~cl~~dP~~RP--s~~ell~~L~~~~~~~~ 694 (720)
...-...+.. ..++| ......+-.++..+|..+|++|. .+.+....+.+|+...-
T Consensus 247 ~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~~v 315 (732)
T KOG4250|consen 247 GVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNLKV 315 (732)
T ss_pred ceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhhhe
Confidence 0000001111 11112 22334567899999999999999 88888888888877553
No 319
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.1e-34 Score=302.31 Aligned_cols=253 Identities=28% Similarity=0.410 Sum_probs=206.7
Q ss_pred HHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
...+.|+..+.||+|+||.||+|.+. ++..|++|.+..... ....+.+|++.++.++|+||+++++++...+..++
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 92 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWV 92 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEE
Confidence 45567888889999999999999876 688999999865432 45678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
|+||+++++|.+++... ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++...
T Consensus 93 v~e~~~~~~L~~~l~~~---~~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~ 166 (286)
T cd06614 93 VMEYMDGGSLTDIITQN---FVRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQL 166 (286)
T ss_pred EEeccCCCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhh
Confidence 99999999999999732 13799999999999999999999998 9999999999999999999999999988655
Q ss_pred CCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
..... ......++..|+|||.+.+..++.++|||||||++|+|++|+.||....+..... ...
T Consensus 167 ~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~----------------~~~ 229 (286)
T cd06614 167 TKEKS-KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALF----------------LIT 229 (286)
T ss_pred ccchh-hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHH----------------HHH
Confidence 43221 2223457889999999998889999999999999999999999997543321111 111
Q ss_pred cccc-CCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 646 DPAL-NGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 646 ~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.... ....+...+..+.+++.+||+.+|.+||++.+++++
T Consensus 230 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 230 TKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred hcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 1111 111122356778999999999999999999999875
No 320
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=3.2e-35 Score=306.60 Aligned_cols=254 Identities=28% Similarity=0.417 Sum_probs=198.0
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCC-CCCccccceEEeecCeEEEEEE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e 488 (720)
+|...+.||+|+||.||++... +++.||+|++...... .....+.+|+..+.++. |+||+++++++...+..+++||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e 83 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME 83 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence 4555678999999999999765 5899999998754432 44567888999999985 9999999999998899999999
Q ss_pred ecCCCCHHHHhhhc-cCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 489 YVGNGNLHDMLHFA-DDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 489 ~~~~gsL~~~l~~~-~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
|+.. ++.++.... ......+++..+..++.|++.||+|||+.. +++||||||+||+++.++.++|+|||++.....
T Consensus 84 ~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 84 LMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVD 160 (288)
T ss_pred cccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence 9864 666654321 123467999999999999999999999742 899999999999999999999999999875543
Q ss_pred CCccccccccccccccCccccccC---CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhh
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSG---IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKM 644 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (720)
... .....|++.|+|||++.+. .++.++|||||||++|||++|+.||....... ..+.+.
T Consensus 161 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---------------~~~~~~ 223 (288)
T cd06616 161 SIA--KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVF---------------DQLTQV 223 (288)
T ss_pred CCc--cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHH---------------HHHhhh
Confidence 221 1234688999999999876 68999999999999999999999997543100 111111
Q ss_pred c---ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 645 V---DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 645 ~---~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
. .+......+...+.++.+|+.+||+.||++||++++++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 224 VKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred cCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1 1111112223466789999999999999999999999976
No 321
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.2e-34 Score=301.78 Aligned_cols=249 Identities=26% Similarity=0.384 Sum_probs=200.9
Q ss_pred CCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 411 SFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
.|...+.||+|++|.||+|.. .+++.+++|++.... ......+.+|+.+++.++||||+++++++...+..++|+||
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~ 97 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK--QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEF 97 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc--hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEec
Confidence 355567899999999999976 468899999885332 23355688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
+++++|.+++. ...+++..+..++.|++.||+|||+. +++||||+|+||+++.++.++|+|||.+.......
T Consensus 98 ~~~~~L~~~~~-----~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~ 169 (285)
T cd06648 98 LEGGALTDIVT-----HTRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV 169 (285)
T ss_pred cCCCCHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCC
Confidence 99999999986 25689999999999999999999999 99999999999999999999999999886544322
Q ss_pred ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccccc
Q 005001 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPAL 649 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (720)
. ......|++.|+|||.+.+..++.++|||||||++|||++|+.||....+...... ......+.
T Consensus 170 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~-------------~~~~~~~~- 234 (285)
T cd06648 170 P-RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKR-------------IRDNLPPK- 234 (285)
T ss_pred c-ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHH-------------HHhcCCCC-
Confidence 1 12235689999999999998899999999999999999999999975433211111 01100001
Q ss_pred CCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 650 NGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 650 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
...+...+..+.+++.+||+.+|++||++.+++++
T Consensus 235 -~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 235 -LKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred -CcccccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence 11122355678999999999999999999999964
No 322
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.8e-34 Score=296.91 Aligned_cols=252 Identities=25% Similarity=0.329 Sum_probs=203.0
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccc---cChHHHHHHHHHHHHhhcCCCCCccccceEEeec--CeE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAA---LSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQR 483 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 483 (720)
++|+..+.||+|+||.||+|... +++.||+|.+.... ........+.+|++++++++|+||+++++++.+. +..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 46888999999999999999764 68999999875321 1234456788999999999999999999998664 468
Q ss_pred EEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
++|+||+++++|.+++.. ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+++
T Consensus 82 ~~v~e~~~~~~L~~~~~~----~~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 154 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKA----YGALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASK 154 (264)
T ss_pred EEEEEeCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcccccc
Confidence 899999999999998862 35688999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCC--ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHH
Q 005001 564 LTPNTE--RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDAL 641 (720)
Q Consensus 564 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (720)
...... ........|+..|+|||.+.+..++.++|+|||||++|||++|+.||...... ...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----------------~~~ 218 (264)
T cd06653 155 RIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM----------------AAI 218 (264)
T ss_pred ccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH----------------HHH
Confidence 653211 11112356899999999999988999999999999999999999999643211 111
Q ss_pred HhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 642 AKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.+..........|....+.+.+++.+||. +|.+||++.+++.+
T Consensus 219 ~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 219 FKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred HHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 12222222334566677889999999999 57999999988764
No 323
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=6.6e-35 Score=308.45 Aligned_cols=271 Identities=25% Similarity=0.360 Sum_probs=199.8
Q ss_pred CCCccceeccCCCcEEEEEEEc---CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeec--CeEE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA---NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQRL 484 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 484 (720)
+|+..+.||+|+||.||+|... +++.||+|.+..... .......+.+|+.+++.++||||+++++++... +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4778889999999999999775 478999999976431 122235567899999999999999999999888 7899
Q ss_pred EEEEecCCCCHHHHhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC----CCceEEccc
Q 005001 485 LVYEYVGNGNLHDMLHFADDSS-KNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD----ELNPHLSDC 559 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~----~~~~kl~Df 559 (720)
+||||+++ +|.+++....... ..+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 7877776443333 3789999999999999999999999 9999999999999999 999999999
Q ss_pred CCCccCCCCCc--cccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcch-------hhH--
Q 005001 560 GLAALTPNTER--QVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSE-------QSL-- 627 (720)
Q Consensus 560 g~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~-------~~~-- 627 (720)
|++........ .......++..|+|||++.+. .++.++|||||||++|||++|+.||........ ...
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99886543322 112345688999999988764 578999999999999999999999976543320 000
Q ss_pred -HHhh-ccccccHH------HHHhhcccccCCCCC---------h--hHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 628 -VRWA-TPQLHDID------ALAKMVDPALNGMYP---------A--KSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 628 -~~~~-~~~~~~~~------~~~~~~~~~~~~~~~---------~--~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.... .+...... ...+..+......++ . .....+.+++.+||+.||++||++.|++++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0000 00000000 000000000011111 0 234568899999999999999999999864
No 324
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=6.8e-35 Score=302.59 Aligned_cols=244 Identities=26% Similarity=0.365 Sum_probs=190.7
Q ss_pred eeccCCCcEEEEEEEc-CCcEEEEEEccccccChH-HHHHHHHHHH---HhhcCCCCCccccceEEeecCeEEEEEEecC
Q 005001 417 LIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQ-EEDNFLEAVS---NMSRLRHPNIVTLAGYCAEHGQRLLVYEYVG 491 (720)
Q Consensus 417 ~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~-~~~~~~~e~~---~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 491 (720)
+||+|+||.||++... +++.+|+|.+........ ....+.+|.. .+...+||||+.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999764 588999998865443222 2233344433 3334479999999999999999999999999
Q ss_pred CCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCcc
Q 005001 492 NGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571 (720)
Q Consensus 492 ~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 571 (720)
+|+|.+++.. .+.+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~L~~~i~~----~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~-- 151 (279)
T cd05633 81 GGDLHYHLSQ----HGVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 151 (279)
T ss_pred CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccC--
Confidence 9999998862 45799999999999999999999999 99999999999999999999999999987543322
Q ss_pred ccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccC
Q 005001 572 VSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALN 650 (720)
Q Consensus 572 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (720)
.....||..|+|||.+.+ ..++.++||||+||++|||++|..||.......... ..+.. ....
T Consensus 152 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--------------~~~~~-~~~~ 215 (279)
T cd05633 152 -PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE--------------IDRMT-LTVN 215 (279)
T ss_pred -ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH--------------HHHHh-hcCC
Confidence 123468999999999874 558999999999999999999999997543321111 11110 1112
Q ss_pred CCCChhHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 005001 651 GMYPAKSLSRFADIIALCVQPEPEFRP-----PMSEVVQA 685 (720)
Q Consensus 651 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~ell~~ 685 (720)
...+...+.++.+++.+||+.||++|| +++|++++
T Consensus 216 ~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 216 VELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred cCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 223445667889999999999999999 58888876
No 325
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=9.2e-35 Score=304.24 Aligned_cols=271 Identities=20% Similarity=0.273 Sum_probs=199.7
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCe-----
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQ----- 482 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~----- 482 (720)
++|+..+.||+|+||.||+|.+. +++.||+|++............+.+|+.+++.+ +||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46888999999999999999765 689999998865443333345678899999999 46999999999877665
Q ss_pred EEEEEEecCCCCHHHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC-CCceEEcccC
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDS-SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD-ELNPHLSDCG 560 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~-~~~~kl~Dfg 560 (720)
.++||||+++ +|.+++...... ...+++..+..++.||+.||.|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecc
Confidence 8999999986 898888643322 35689999999999999999999999 9999999999999998 8899999999
Q ss_pred CCccCCCCCccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhh-HHHhh-cccccc
Q 005001 561 LAALTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQS-LVRWA-TPQLHD 637 (720)
Q Consensus 561 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~-~~~~~-~~~~~~ 637 (720)
++........ ......+++.|+|||.+.+ ..++.++||||||+++|||++|..||.......... ..... .+....
T Consensus 157 ~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (295)
T cd07837 157 LGRAFSIPVK-SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQV 235 (295)
T ss_pred cceecCCCcc-ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 9875533211 1122357889999998865 457899999999999999999999997654322211 11100 000000
Q ss_pred ---HHHHHhhcc-cccCC----CCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 638 ---IDALAKMVD-PALNG----MYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 638 ---~~~~~~~~~-~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
......... +.... ......+.++.++|.+||..||.+||++.|++.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 236 WPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred CcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000000000 00000 0012345678899999999999999999999864
No 326
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.5e-34 Score=301.06 Aligned_cols=267 Identities=24% Similarity=0.374 Sum_probs=202.3
Q ss_pred CCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec--CeEEEEEE
Q 005001 412 FSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQRLLVYE 488 (720)
Q Consensus 412 y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lV~e 488 (720)
|+..+.||+|+||.||+|... +++.+|+|++............+.+|+++++.++|+|++++++++... +..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567789999999999999776 588999999976543334456788999999999999999999999888 89999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+++ +|.+++.. ....+++..+..++.|+++||+|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 81 ~~~~-~l~~~~~~---~~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 81 YMDH-DLTGLLDS---PEVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKR 153 (287)
T ss_pred cccc-cHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence 9975 89888862 235789999999999999999999999 9999999999999999999999999999866544
Q ss_pred CccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHH-Hhhc-cccccHHHHHhh-
Q 005001 569 ERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLV-RWAT-PQLHDIDALAKM- 644 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~- 644 (720)
.........++..|+|||.+.+ ..++.++||||||+++|||++|+.||...........+ .... +....+....+.
T Consensus 154 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07840 154 NSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLP 233 (287)
T ss_pred CcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccch
Confidence 3222333467889999998775 45789999999999999999999999865543222111 1100 000000000000
Q ss_pred ----cc------cccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 645 ----VD------PALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 645 ----~~------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.. ......+....+..+.+++++||+.+|++||++++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 234 WFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred hhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00 000000111125678899999999999999999999864
No 327
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=2.4e-34 Score=298.89 Aligned_cols=261 Identities=23% Similarity=0.310 Sum_probs=195.1
Q ss_pred CCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEeec--CeEEEEE
Q 005001 412 FSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEH--GQRLLVY 487 (720)
Q Consensus 412 y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~--~~~~lV~ 487 (720)
|+..+.||+|+||.||+|... +++.||+|+++....... .....+|+..+.++ +|+||+++++++.+. +..++|+
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~-~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~ 79 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE-QVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVF 79 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCch-hhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEE
Confidence 566788999999999999764 688999999875433322 23445788888888 499999999999887 8899999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++ +|.+++.. ....+++.++..++.|++.||+|||+. +++||||||+||+++. +.+||+|||++.....
T Consensus 80 e~~~~-~l~~~l~~---~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~ 151 (282)
T cd07831 80 ELMDM-NLYELIKG---RKRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYS 151 (282)
T ss_pred ecCCc-cHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEeccccccccc
Confidence 99974 88887763 235789999999999999999999999 9999999999999999 9999999999976543
Q ss_pred CCccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
... .....++..|+|||.+.+ ..++.++|||||||++|||++|..||.............-...... ....+...
T Consensus 152 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 227 (282)
T cd07831 152 KPP--YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPD--AEVLKKFR 227 (282)
T ss_pred CCC--cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCC--HHHHHhhc
Confidence 222 123467899999997754 5578899999999999999999999976544221111110000000 00001100
Q ss_pred cc--cCCCC-----------ChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 647 PA--LNGMY-----------PAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 647 ~~--~~~~~-----------~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.. ....+ ....+..+.+++.+||+.+|++||++++++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 228 KSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred ccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 00 00001 12346789999999999999999999999864
No 328
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=9.2e-35 Score=306.41 Aligned_cols=269 Identities=26% Similarity=0.348 Sum_probs=200.4
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec--CeEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQRLL 485 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 485 (720)
.++|+..+.||+|+||.||+|... +|+.||+|++............+.+|+.++++++|+||+++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 457889999999999999999775 689999999865433322334566899999999999999999998654 56899
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
||||+.+ +|.+++... ...+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 86 v~e~~~~-~l~~~l~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~ 158 (309)
T cd07845 86 VMEYCEQ-DLASLLDNM---PTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTY 158 (309)
T ss_pred EEecCCC-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeec
Confidence 9999975 898888632 36789999999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHH-hhccccccH-HHHH
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVR-WATPQLHDI-DALA 642 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~-~~~~~~~~~-~~~~ 642 (720)
..... ......+++.|+|||.+.+ ..++.++||||+||++|||++|+.||....+......+. ......... ....
T Consensus 159 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
T cd07845 159 GLPAK-PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFS 237 (309)
T ss_pred CCccC-CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhh
Confidence 54321 1222346788999999876 457899999999999999999999998655432222111 100000000 0000
Q ss_pred hhc---ccccCCC-C------ChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 643 KMV---DPALNGM-Y------PAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 643 ~~~---~~~~~~~-~------~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
... .-..... . ....+..+.++|.+||+.||++||++++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 238 DLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred cccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000 0000000 0 01135667899999999999999999999975
No 329
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=2.4e-34 Score=293.79 Aligned_cols=249 Identities=26% Similarity=0.450 Sum_probs=208.0
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
+|+..+.||+|++|.||+|... +++.|++|.+............+.+|++++++++|+|++++++++...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4777889999999999999765 578999999987665555677899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~~~~----~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 81 AENGSLRQIIKK----FGPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS 153 (254)
T ss_pred CCCCcHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCc
Confidence 999999999863 36789999999999999999999999 99999999999999999999999999998765433
Q ss_pred ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccccc
Q 005001 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPAL 649 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (720)
.. .....++..|+|||...+..++.++||||+|+++|+|++|+.||........ ..+... ..
T Consensus 154 ~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~----------------~~~~~~-~~ 215 (254)
T cd06627 154 KD-DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAA----------------LFRIVQ-DD 215 (254)
T ss_pred cc-ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHH----------------HHHHhc-cC
Confidence 22 2335688999999999888889999999999999999999999975432110 001110 11
Q ss_pred CCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 005001 650 NGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQ 684 (720)
Q Consensus 650 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~ 684 (720)
....+...+..+.+++.+||..+|++||++.+++.
T Consensus 216 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 216 HPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 12234455678899999999999999999999885
No 330
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.3e-34 Score=307.84 Aligned_cols=265 Identities=23% Similarity=0.329 Sum_probs=196.7
Q ss_pred ceeccC--CCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecCC
Q 005001 416 FLIGEG--SLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (720)
Q Consensus 416 ~~lG~G--~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 492 (720)
..||+| +||+||+|.+. +|+.||+|.+..........+.+.+|+.+++.++||||+++++++...+..++|+||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 356776 99999999774 799999999876554555567888999999999999999999999999999999999999
Q ss_pred CCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccc
Q 005001 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (720)
Q Consensus 493 gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 572 (720)
++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||+.+..........
T Consensus 84 ~~l~~~l~~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 84 GSANSLLKTYF--PEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred CCHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccc
Confidence 99999987432 34589999999999999999999998 99999999999999999999999998654322111100
Q ss_pred ------cccccccccccCccccccC--CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccc-------ccc
Q 005001 573 ------STQMVGAFGYSAPEFALSG--IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQ-------LHD 637 (720)
Q Consensus 573 ------~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~-------~~~ 637 (720)
.....++..|+|||++.+. .++.++|||||||++|||++|+.||................+. ...
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (328)
T cd08226 159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPC 238 (328)
T ss_pred cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccch
Confidence 0112355679999999774 4789999999999999999999999765422111000000000 000
Q ss_pred HHH--------H---------H-----hhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 638 IDA--------L---------A-----KMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 638 ~~~--------~---------~-----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
... . . .+.........+...+..+.+|+++||+.||++|||++|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred hhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 000 0 0 0000111112233466789999999999999999999999966
No 331
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.4e-35 Score=329.65 Aligned_cols=253 Identities=27% Similarity=0.395 Sum_probs=194.4
Q ss_pred HHHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec----
Q 005001 406 QTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH---- 480 (720)
Q Consensus 406 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~---- 480 (720)
.+-.++|+....||+||||.||+++.+ ||..||||++.... +......+.+|+..+++++|||||+++..+.+.
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~ 553 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAEL 553 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcc
Confidence 345677889999999999999999887 89999999998776 666678889999999999999999987654110
Q ss_pred --------------------------------------------------------------------------------
Q 005001 481 -------------------------------------------------------------------------------- 480 (720)
Q Consensus 481 -------------------------------------------------------------------------------- 480 (720)
T Consensus 554 ~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~t 633 (1351)
T KOG1035|consen 554 TVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNT 633 (1351)
T ss_pred ccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccc
Confidence
Q ss_pred -----------------------------------CeEEEEEEecCCCCHHHHhhhccCCCCCC-CHHHHHHHHHHHHHH
Q 005001 481 -----------------------------------GQRLLVYEYVGNGNLHDMLHFADDSSKNL-TWNARVRVALGTARA 524 (720)
Q Consensus 481 -----------------------------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~-~~~~~~~i~~qi~~~ 524 (720)
..+||-||||+..+|.++++.. ... .....++++++|++|
T Consensus 634 S~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N----~~~~~~d~~wrLFreIlEG 709 (1351)
T KOG1035|consen 634 SDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRN----HFNSQRDEAWRLFREILEG 709 (1351)
T ss_pred cccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhc----ccchhhHHHHHHHHHHHHH
Confidence 1137888999887788777631 111 467889999999999
Q ss_pred HHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC-----------------CCCccccccccccccccCccc
Q 005001 525 LEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP-----------------NTERQVSTQMVGAFGYSAPEF 587 (720)
Q Consensus 525 L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~-----------------~~~~~~~~~~~gt~~y~aPE~ 587 (720)
|.|+|++ |||||||||.||++++++.|||+|||+|.... .......++.+||.-|+|||+
T Consensus 710 LaYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEl 786 (1351)
T KOG1035|consen 710 LAYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPEL 786 (1351)
T ss_pred HHHHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHH
Confidence 9999999 99999999999999999999999999997621 011113356789999999999
Q ss_pred cccCC---CcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCC--CChhHHHHHH
Q 005001 588 ALSGI---YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGM--YPAKSLSRFA 662 (720)
Q Consensus 588 ~~~~~---~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~ 662 (720)
+.+.. |+.|+|+||||||++||+. ||....++ ...+....++.+... +.......=.
T Consensus 787 l~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMER---------------a~iL~~LR~g~iP~~~~f~~~~~~~e~ 848 (1351)
T KOG1035|consen 787 LSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMER---------------ASILTNLRKGSIPEPADFFDPEHPEEA 848 (1351)
T ss_pred hcccccccccchhhhHHHHHHHHHHhc---cCCchHHH---------------HHHHHhcccCCCCCCcccccccchHHH
Confidence 98754 9999999999999999986 56543221 112222222222222 1122223346
Q ss_pred HHHHHhcCCCCCCCCCHHHHHH
Q 005001 663 DIIALCVQPEPEFRPPMSEVVQ 684 (720)
Q Consensus 663 ~li~~cl~~dP~~RPs~~ell~ 684 (720)
.+|++|++.||.+||||.|+++
T Consensus 849 slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 849 SLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred HHHHHHhcCCCccCCCHHHHhh
Confidence 8999999999999999999985
No 332
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.6e-34 Score=302.15 Aligned_cols=260 Identities=17% Similarity=0.211 Sum_probs=187.4
Q ss_pred hcCCCccceeccCCCcEEEEEEEcCC----cEEEEEEccccccChHH---------HHHHHHHHHHhhcCCCCCccccce
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFANG----KIMAVKKIDNAALSLQE---------EDNFLEAVSNMSRLRHPNIVTLAG 475 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~~----~~vavK~~~~~~~~~~~---------~~~~~~e~~~l~~l~h~niv~l~~ 475 (720)
.++|.+.+.||+|+||.||+|...++ ..+|+|........... ......+...+..++|+|++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 46799999999999999999987543 45566653322111100 111223444566779999999998
Q ss_pred EEeecC----eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCC
Q 005001 476 YCAEHG----QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE 551 (720)
Q Consensus 476 ~~~~~~----~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~ 551 (720)
++.... ..++++|++.. ++.+.+.. ....++..+..++.|++.||+|||+. +|+||||||+|||++.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~ 162 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVE-NTKEIFKR----IKCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGN 162 (294)
T ss_pred eeeEecCCceEEEEEEehhcc-CHHHHHHh----hccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCC
Confidence 765543 34788887754 67776652 23457888899999999999999999 99999999999999999
Q ss_pred CceEEcccCCCccCCCCCcc------ccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchh
Q 005001 552 LNPHLSDCGLAALTPNTERQ------VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQ 625 (720)
Q Consensus 552 ~~~kl~Dfg~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~ 625 (720)
+.++|+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 163 ~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~ 242 (294)
T PHA02882 163 NRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNL 242 (294)
T ss_pred CcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHH
Confidence 99999999999765432211 112346999999999999999999999999999999999999999765322111
Q ss_pred hHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 626 SLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
+.. ...+...+...... ....++..+.+++..||..+|++||++.++++.|
T Consensus 243 --~~~-----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 243 --IHA-----AKCDFIKRLHEGKI---KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred --HHH-----hHHHHHHHhhhhhh---ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 000 00011111111111 1233467899999999999999999999999876
No 333
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.6e-34 Score=299.64 Aligned_cols=247 Identities=26% Similarity=0.373 Sum_probs=196.6
Q ss_pred eccCCCcEEEEEEEc-CCcEEEEEEccccccC-hHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecCCCCH
Q 005001 418 IGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNL 495 (720)
Q Consensus 418 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 495 (720)
||+|+||+||+|... +|+.||+|.+...... ......+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999654 6889999998654322 22345667899999999999999999999999999999999999999
Q ss_pred HHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCcccccc
Q 005001 496 HDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQ 575 (720)
Q Consensus 496 ~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 575 (720)
.+++.... ...+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||.+...... .....
T Consensus 81 ~~~l~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~--~~~~~ 153 (277)
T cd05577 81 KYHIYNVG--EPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG--KKIKG 153 (277)
T ss_pred HHHHHHcC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC--Ccccc
Confidence 99987322 24689999999999999999999999 9999999999999999999999999998765432 12233
Q ss_pred ccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCCCh
Q 005001 576 MVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPA 655 (720)
Q Consensus 576 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (720)
..++..|+|||.+.+..++.++|||||||++|+|++|+.||........... +.+.... .....+.
T Consensus 154 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-------------~~~~~~~-~~~~~~~ 219 (277)
T cd05577 154 RAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEE-------------LKRRTLE-MAVEYPD 219 (277)
T ss_pred ccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHH-------------HHhcccc-ccccCCc
Confidence 4678899999999988899999999999999999999999976543211111 1111110 1112334
Q ss_pred hHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 005001 656 KSLSRFADIIALCVQPEPEFRP-----PMSEVVQA 685 (720)
Q Consensus 656 ~~~~~l~~li~~cl~~dP~~RP-----s~~ell~~ 685 (720)
..+..+.+++.+||+.||++|| ++.+++++
T Consensus 220 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h 254 (277)
T cd05577 220 KFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREH 254 (277)
T ss_pred cCCHHHHHHHHHHccCChhHccCCCcccHHHHHhC
Confidence 4567889999999999999999 66666643
No 334
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=3e-34 Score=292.33 Aligned_cols=250 Identities=30% Similarity=0.485 Sum_probs=204.9
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
.|+..+.||+|++|.||++... +++.+++|++..... .....+.+|+..+++++|+||+++++++...+..++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~ 78 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEF 78 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEec
Confidence 3677889999999999999875 688999999975442 3567788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
+++++|.+++... ...+++..+..++.|++.||+|||+. +++||||+|+||+++.++.++|+|||.+.......
T Consensus 79 ~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 152 (253)
T cd05122 79 CSGGSLKDLLKST---NQTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTK 152 (253)
T ss_pred CCCCcHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeeccccccccccc
Confidence 9999999998632 25789999999999999999999998 99999999999999999999999999987665433
Q ss_pred ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccccc
Q 005001 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPAL 649 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (720)
. .....++..|+|||.+.+..++.++||||||+++|+|++|+.||............ .. ....
T Consensus 153 ~--~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~-------------~~--~~~~ 215 (253)
T cd05122 153 A--RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKI-------------AT--NGPP 215 (253)
T ss_pred c--ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHH-------------Hh--cCCC
Confidence 2 23456889999999999888999999999999999999999999754322111100 00 0000
Q ss_pred CCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 650 NGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 650 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
....+...+..+.+++.+||+.||++||++.+++++
T Consensus 216 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 216 GLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred CcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111112235678999999999999999999999864
No 335
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=3.6e-34 Score=302.88 Aligned_cols=250 Identities=28% Similarity=0.437 Sum_probs=200.4
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
.|...+.||+|+||.||+|... +++.||+|++..... .......+.+|++++++++|||++++++++......++|||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 3677889999999999999764 688999999864422 23345678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+.+ +|.+.+.. ....+++.++..++.|++.||.|||+. +|+||||+|+||+++.++.++|+|||++......
T Consensus 106 ~~~g-~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (317)
T cd06635 106 YCLG-SASDLLEV---HKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASPA 178 (317)
T ss_pred CCCC-CHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCCc
Confidence 9975 78777752 245689999999999999999999999 9999999999999999999999999998654322
Q ss_pred CccccccccccccccCccccc---cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 569 ERQVSTQMVGAFGYSAPEFAL---SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
....|++.|+|||.+. ++.++.++|||||||++|||++|+.||........ .....
T Consensus 179 -----~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~----------------~~~~~ 237 (317)
T cd06635 179 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA----------------LYHIA 237 (317)
T ss_pred -----ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH----------------HHHHH
Confidence 2346888999999974 45688999999999999999999999875432111 11111
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVR 688 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~ 688 (720)
............+..+.+++.+||+.+|.+||++.++++++..
T Consensus 238 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~ 280 (317)
T cd06635 238 QNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFV 280 (317)
T ss_pred hccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhh
Confidence 1111111223455678999999999999999999999987543
No 336
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7e-36 Score=331.22 Aligned_cols=259 Identities=24% Similarity=0.308 Sum_probs=217.9
Q ss_pred hcHHHHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeec
Q 005001 403 ASLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH 480 (720)
Q Consensus 403 ~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 480 (720)
..++....+|.+.++||+|+||.|..++++ +++.||+|++.+-.. ...+.+.|.+|-.+|..-+.+-|+.++-.|.++
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 345556778999999999999999999875 588999999976443 244567788999999988999999999999999
Q ss_pred CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccC
Q 005001 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (720)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 560 (720)
.++|+|||||+||+|-.++.. -.++++..++-++..|.-||.-||+. |+|||||||+|||+|..|++||+|||
T Consensus 148 ~~LYlVMdY~pGGDlltLlSk----~~~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFG 220 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLSK----FDRLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFG 220 (1317)
T ss_pred cceEEEEecccCchHHHHHhh----cCCChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccch
Confidence 999999999999999999973 23799999999999999999999999 99999999999999999999999999
Q ss_pred CCccCCCCCccccccccccccccCcccccc-----CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcccc
Q 005001 561 LAALTPNTERQVSTQMVGAFGYSAPEFALS-----GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQL 635 (720)
Q Consensus 561 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~ 635 (720)
.+-.+..++...+...+|||.|++||++.. +.|+..+|+||+||++|||+.|..||....-
T Consensus 221 sClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadsl-------------- 286 (1317)
T KOG0612|consen 221 SCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSL-------------- 286 (1317)
T ss_pred hHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHH--------------
Confidence 998887777777777899999999999963 5689999999999999999999999975321
Q ss_pred ccHHHHHhhcccccCCCCC--hhHHHHHHHHHHHhcCCCCCCCCC---HHHHHHH
Q 005001 636 HDIDALAKMVDPALNGMYP--AKSLSRFADIIALCVQPEPEFRPP---MSEVVQA 685 (720)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dP~~RPs---~~ell~~ 685 (720)
.+.+.++++-.-...+| ...+.+..+||++.+.. |+.|.. +.++..+
T Consensus 287 --veTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~~-~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 287 --VETYGKIMNHKESLSFPDETDVSEEAKDLIEALLCD-REVRLGRNGIEDIKNH 338 (1317)
T ss_pred --HHHHHHHhchhhhcCCCcccccCHHHHHHHHHHhcC-hhhhcccccHHHHHhC
Confidence 23344444443334455 45778889999998864 777777 7777765
No 337
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.1e-34 Score=309.39 Aligned_cols=265 Identities=22% Similarity=0.327 Sum_probs=198.7
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec-----Ce
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH-----GQ 482 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 482 (720)
.++|++.+.||+|+||.||+|... +|+.||+|++.... .......+.+|+.++++++||||+++++++... ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE-HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 467999999999999999999754 68999999986432 223445678899999999999999999986543 35
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCC
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a 562 (720)
.++|+||+.+ +|.+.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 83 ~~lv~e~~~~-~l~~~~~-----~~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~ 153 (336)
T cd07849 83 VYIVQELMET-DLYKLIK-----TQHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLA 153 (336)
T ss_pred EEEEehhccc-CHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccce
Confidence 7999999975 8888775 46799999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCcc--ccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHH-HhhccccccH
Q 005001 563 ALTPNTERQ--VSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLV-RWATPQLHDI 638 (720)
Q Consensus 563 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~-~~~~~~~~~~ 638 (720)
......... ......||+.|+|||.+.+ ..++.++||||+||++|||++|+.||............ ..... ...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~--~~~ 231 (336)
T cd07849 154 RIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGT--PSQ 231 (336)
T ss_pred eeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCC--CCH
Confidence 765432221 1133568999999998765 56899999999999999999999999764322111111 00000 000
Q ss_pred HHHHhhcccc-------c--CCCC-----ChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 639 DALAKMVDPA-------L--NGMY-----PAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 639 ~~~~~~~~~~-------~--~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+....+.... . .... ....+.++.+++.+||+.||++||++.|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 232 EDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1111100000 0 0000 01234668899999999999999999999987
No 338
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.5e-34 Score=302.41 Aligned_cols=269 Identities=22% Similarity=0.301 Sum_probs=199.5
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
++|+..+.||+|++|.||+|... +|+.||+|++............+.+|++++++++||||+++++++...+..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46888999999999999999775 68899999986544333344667889999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC-CCceEEcccCCCccCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD-ELNPHLSDCGLAALTPN 567 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~ 567 (720)
|++ ++|.+++... ....+++..+..++.||+.||+|||+. +++||||+|+||+++. ++.+||+|||++.....
T Consensus 82 ~~~-~~l~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~ 155 (294)
T PLN00009 82 YLD-LDLKKHMDSS--PDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI 155 (294)
T ss_pred ccc-ccHHHHHHhC--CCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCC
Confidence 996 4888877522 233468888899999999999999999 9999999999999985 56799999999976543
Q ss_pred CCccccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHH-Hh-hccc---cccHHHH
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLV-RW-ATPQ---LHDIDAL 641 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~-~~-~~~~---~~~~~~~ 641 (720)
... ......+++.|+|||.+.+. .++.++||||+||++|+|+||+.||....+....... .. ..+. +.....+
T Consensus 156 ~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (294)
T PLN00009 156 PVR-TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSL 234 (294)
T ss_pred Ccc-ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccc
Confidence 221 12234678899999998764 5789999999999999999999999765432221111 00 0000 0000000
Q ss_pred Hhhc--ccccCC----CCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 642 AKMV--DPALNG----MYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 642 ~~~~--~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.... .+.... ......+.++.+++.+||+.+|++||++.+++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 235 PDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred hhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 000000 0112345668899999999999999999999964
No 339
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.8e-34 Score=303.07 Aligned_cols=272 Identities=24% Similarity=0.317 Sum_probs=202.3
Q ss_pred HHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecC----
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG---- 481 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---- 481 (720)
...++|+..+.||+|+||.||+|... +|+.||+|.++...........+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45678999999999999999999875 5889999998754433334456778999999999999999999887654
Q ss_pred ------eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceE
Q 005001 482 ------QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPH 555 (720)
Q Consensus 482 ------~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~k 555 (720)
..++|+||+++ ++.+.+.. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+|
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~k 156 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLES---GLVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIK 156 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEE
Confidence 78999999986 77777652 235789999999999999999999999 999999999999999999999
Q ss_pred EcccCCCccCCCCCccccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhh-cc
Q 005001 556 LSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWA-TP 633 (720)
Q Consensus 556 l~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~-~~ 633 (720)
|+|||++...............++..|+|||.+.+. .++.++|||||||++|||++|+.||...........+... ..
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~ 236 (302)
T cd07864 157 LADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGS 236 (302)
T ss_pred eCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Confidence 999999976654332222233567889999988654 5789999999999999999999999764432222111110 00
Q ss_pred c----cccHHHHHhh--ccccc-----CCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 634 Q----LHDIDALAKM--VDPAL-----NGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 634 ~----~~~~~~~~~~--~~~~~-----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
. +......... .+... ........+..+.+++.+||+.||.+||++.+++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 237 PCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred CChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 0000000000 00000 000111245678999999999999999999999864
No 340
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.8e-34 Score=307.96 Aligned_cols=272 Identities=23% Similarity=0.332 Sum_probs=204.8
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec-----Ce
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH-----GQ 482 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 482 (720)
.++|...+.||+|+||.||+|... +++.||+|++............+.+|+.+++.++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 457889999999999999999764 689999999875443344456677899999999999999999987654 35
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCC
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a 562 (720)
.++|+||+. ++|.+++. ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++
T Consensus 84 ~~lv~e~~~-~~L~~~~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 155 (337)
T cd07858 84 VYIVYELMD-TDLHQIIR----SSQTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLA 155 (337)
T ss_pred EEEEEeCCC-CCHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccc
Confidence 799999996 68988886 346799999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHH-hhccccc----
Q 005001 563 ALTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVR-WATPQLH---- 636 (720)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~-~~~~~~~---- 636 (720)
....... .......++..|+|||.+.. ..++.++|||||||++|+|++|+.||...........+. .......
T Consensus 156 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (337)
T cd07858 156 RTTSEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLG 234 (337)
T ss_pred cccCCCc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhh
Confidence 7664332 22334568889999998875 468999999999999999999999997653221111111 0000000
Q ss_pred --cHHHHHhhccc---ccCC---CCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH--HHHH
Q 005001 637 --DIDALAKMVDP---ALNG---MYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA--LVRL 689 (720)
Q Consensus 637 --~~~~~~~~~~~---~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~--L~~~ 689 (720)
......+.... .... ......+..+.+++++||+.||++||++++++++ +..+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 235 FIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred hcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 00001111100 0000 0112355678999999999999999999999988 5554
No 341
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=3.7e-34 Score=297.88 Aligned_cols=266 Identities=24% Similarity=0.373 Sum_probs=201.8
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
+|+..+.||+|++|.||+|... +|+.||+|++..... ......+.+|+.++++++|+||+++++++...+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE-EGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEY 79 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc-ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEec
Confidence 4788899999999999999875 688999999875432 22345677899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
+++ +|.+++.... ....+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||++.......
T Consensus 80 ~~~-~l~~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~ 154 (284)
T cd07836 80 MDK-DLKKYMDTHG-VRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV 154 (284)
T ss_pred CCc-cHHHHHHhcC-CCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc
Confidence 985 8988886322 235689999999999999999999998 99999999999999999999999999987553322
Q ss_pred ccccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhh-HHHhh-ccccccHHHHHhhcc
Q 005001 570 RQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQS-LVRWA-TPQLHDIDALAKMVD 646 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~ 646 (720)
. ......++..|++||.+.+. .++.++|||||||++|||++|+.||.......... ..... .+.-..+..+...
T Consensus 155 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 231 (284)
T cd07836 155 N-TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQL-- 231 (284)
T ss_pred c-ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcC--
Confidence 1 12234578899999998764 47889999999999999999999997654332211 11111 1111111111100
Q ss_pred cccCCC-----------CChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 647 PALNGM-----------YPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 647 ~~~~~~-----------~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+..... .....+..+.+++.+||+.||.+||++.+++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 232 PEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred chhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000001 112335678899999999999999999999853
No 342
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.8e-34 Score=307.49 Aligned_cols=269 Identities=24% Similarity=0.337 Sum_probs=203.2
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEee----cCeE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE----HGQR 483 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~ 483 (720)
..+|+..+.||+|+||.||+|... +|+.||+|++............+.+|+.++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 367888999999999999999765 68999999987654334445677889999999999999999998753 3468
Q ss_pred EEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
++||||+. ++|.++++ ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 84 ~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~ 155 (334)
T cd07855 84 YVVMDLME-SDLHHIIH----SDQPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMAR 155 (334)
T ss_pred EEEEehhh-hhHHHHhc----cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccce
Confidence 99999996 58988886 245689999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCCc---cccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhh--ccccc-
Q 005001 564 LTPNTER---QVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWA--TPQLH- 636 (720)
Q Consensus 564 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~--~~~~~- 636 (720)
....... .......|+..|+|||.+.+ ..++.++|||||||++|||++|+.||...........+... .+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~ 235 (334)
T cd07855 156 GLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEV 235 (334)
T ss_pred eecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHh
Confidence 5533221 11233578999999999866 45889999999999999999999999765433221111110 00000
Q ss_pred ----cHHHHHhhccc-ccCCCC-----ChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 637 ----DIDALAKMVDP-ALNGMY-----PAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 637 ----~~~~~~~~~~~-~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
......+.... ...... ....+.++.+++++||+.||++||++.+++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 236 LNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 00011111110 000011 12346779999999999999999999999976
No 343
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=1.4e-34 Score=304.96 Aligned_cols=270 Identities=22% Similarity=0.318 Sum_probs=198.6
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecC------
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG------ 481 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 481 (720)
.++|+..+.||+|+||.||+|... +++.||+|++............+.+|+.++++++||||+++++++...+
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 356889999999999999999765 6889999998654333333445678999999999999999999886644
Q ss_pred --eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEccc
Q 005001 482 --QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDC 559 (720)
Q Consensus 482 --~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Df 559 (720)
..++||||+.+ +|.+.+.. ....+++.++..++.|++.||+|||+. +++|+||||+||+++.++.+||+||
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~df 163 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSN---KNVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADF 163 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcC
Confidence 45999999965 88887752 234689999999999999999999999 9999999999999999999999999
Q ss_pred CCCccCCCCCcc---ccccccccccccCccccccCC-CcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcc--
Q 005001 560 GLAALTPNTERQ---VSTQMVGAFGYSAPEFALSGI-YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATP-- 633 (720)
Q Consensus 560 g~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~-- 633 (720)
|++......... ......++..|+|||.+.+.. ++.++||||||+++|||++|+.||....+......+.....
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
T cd07865 164 GLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSI 243 (310)
T ss_pred CCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 999765432221 112345788999999887654 78899999999999999999999976554322222211110
Q ss_pred ------ccccHHHHHhhcccc-cCCC-----CChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 634 ------QLHDIDALAKMVDPA-LNGM-----YPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 634 ------~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.............+. .... .+......+.++|.+||+.||++||+++|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 244 TPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred ChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 000000000000000 0000 001123456799999999999999999999864
No 344
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=2.3e-34 Score=298.56 Aligned_cols=251 Identities=26% Similarity=0.376 Sum_probs=206.2
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCC-CCCccccceEEeecCeEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV 486 (720)
++|...+.||+|+||.||+|... +++.||+|.+..... .......+.+|..++++++ ||||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 46888999999999999999765 689999999875433 2334567888999999998 99999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||+++++|.+++.. ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++++|||++....
T Consensus 81 ~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~ 153 (280)
T cd05581 81 LEYAPNGELLQYIRK----YGSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLD 153 (280)
T ss_pred EcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccC
Confidence 999999999999973 34799999999999999999999999 99999999999999999999999999987654
Q ss_pred CCCc-------------------cccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhH
Q 005001 567 NTER-------------------QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSL 627 (720)
Q Consensus 567 ~~~~-------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~ 627 (720)
.... .......|+..|+|||.+.+..++.++||||||++++++++|+.||......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----- 228 (280)
T cd05581 154 PNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY----- 228 (280)
T ss_pred CccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH-----
Confidence 3321 1122346789999999999888999999999999999999999999754321
Q ss_pred HHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCH----HHHHHH
Q 005001 628 VRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPM----SEVVQA 685 (720)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~----~ell~~ 685 (720)
....+.. ......+...+..+.+++.+||+.||.+||++ .+++++
T Consensus 229 -----------~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 229 -----------LTFQKIL--KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred -----------HHHHHHH--hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 1111111 11223445557788999999999999999999 777653
No 345
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-35 Score=261.70 Aligned_cols=267 Identities=23% Similarity=0.328 Sum_probs=210.2
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
.|...++||+|.||+||+|+.. +++.||+|+++............++|+.+++.++|.|||++++....+...-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 4667789999999999999765 588999999987665555567789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
|.. +|..+.. .-++.++.+.++.++.|+++||.++|++ ++.|||+||+|.+++.+|++|++|||+++.+.-+.
T Consensus 83 cdq-dlkkyfd---slng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipv 155 (292)
T KOG0662|consen 83 CDQ-DLKKYFD---SLNGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV 155 (292)
T ss_pred hhH-HHHHHHH---hcCCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCce
Confidence 976 7777664 4578899999999999999999999999 99999999999999999999999999999876655
Q ss_pred ccccccccccccccCccccccCC-CcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHh--hccccccHHHHHhhc
Q 005001 570 RQVSTQMVGAFGYSAPEFALSGI-YTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRW--ATPQLHDIDALAKMV 645 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 645 (720)
...+. .+-|..|++|.++.+.+ |+.+.|+||.||++.|+.. |++.|.+.+-.+....+-+ ..+.-..+..+.+.-
T Consensus 156 rcysa-evvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lp 234 (292)
T KOG0662|consen 156 RCYSA-EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLP 234 (292)
T ss_pred Eeeec-eeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCC
Confidence 44433 45689999999999876 8999999999999999997 6666766654443333322 233222232232222
Q ss_pred ccccCCCCChh---------HHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 646 DPALNGMYPAK---------SLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 646 ~~~~~~~~~~~---------~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+-.....+|.. ....-++++++.+.-+|..|.++++.+++
T Consensus 235 dyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 235 DYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred CCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 22222222221 11234689999999999999999998865
No 346
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=4.7e-34 Score=296.13 Aligned_cols=244 Identities=27% Similarity=0.386 Sum_probs=190.6
Q ss_pred eeccCCCcEEEEEEEc-CCcEEEEEEccccccCh-HHHHHHHHH---HHHhhcCCCCCccccceEEeecCeEEEEEEecC
Q 005001 417 LIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL-QEEDNFLEA---VSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVG 491 (720)
Q Consensus 417 ~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~e---~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 491 (720)
+||+|+||.||+|... +++.||+|.+....... .....+..| +..++...||||+.+.+++...+..++||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999764 58899999986543321 112223333 334555689999999999999999999999999
Q ss_pred CCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCcc
Q 005001 492 NGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571 (720)
Q Consensus 492 ~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 571 (720)
+|+|.+++. ..+.+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++.......
T Consensus 81 g~~L~~~l~----~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~-- 151 (278)
T cd05606 81 GGDLHYHLS----QHGVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 151 (278)
T ss_pred CCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccC--
Confidence 999999886 245799999999999999999999998 99999999999999999999999999987553322
Q ss_pred ccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccC
Q 005001 572 VSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALN 650 (720)
Q Consensus 572 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (720)
.....|+..|+|||.+.++ .++.++||||+||++|||++|+.||........... .+.. ....
T Consensus 152 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~--------------~~~~-~~~~ 215 (278)
T cd05606 152 -PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI--------------DRMT-LTMA 215 (278)
T ss_pred -CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHH--------------HHHh-hccC
Confidence 1234689999999999754 589999999999999999999999976533211110 0100 0111
Q ss_pred CCCChhHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 005001 651 GMYPAKSLSRFADIIALCVQPEPEFRP-----PMSEVVQA 685 (720)
Q Consensus 651 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~ell~~ 685 (720)
...+...+..+.+++.+||..+|.+|| ++.+++++
T Consensus 216 ~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 216 VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred CCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 223334567889999999999999999 89898864
No 347
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=4.6e-34 Score=298.24 Aligned_cols=246 Identities=26% Similarity=0.395 Sum_probs=198.8
Q ss_pred ccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecCC
Q 005001 414 QEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (720)
Q Consensus 414 ~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 492 (720)
....||+|+||.||++... +++.||+|++... .......+.+|+.+++.++|+||+++++++...+..++||||+++
T Consensus 24 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 101 (292)
T cd06657 24 NFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR--KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 101 (292)
T ss_pred hHHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc--chhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCC
Confidence 3457999999999999774 6899999988543 233456788999999999999999999999999999999999999
Q ss_pred CCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccc
Q 005001 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (720)
Q Consensus 493 gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 572 (720)
++|.+++. ...+++..+..++.|++.||+|||+. +++||||+|+||+++.++.++|+|||++........ .
T Consensus 102 ~~L~~~~~-----~~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~-~ 172 (292)
T cd06657 102 GALTDIVT-----HTRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-R 172 (292)
T ss_pred CcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceecccccc-c
Confidence 99999875 34689999999999999999999999 999999999999999999999999998875543221 1
Q ss_pred cccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCC
Q 005001 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGM 652 (720)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (720)
.....|++.|+|||.+.+..++.++|+||+|+++|||++|..||........... ..........
T Consensus 173 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~-------------~~~~~~~~~~-- 237 (292)
T cd06657 173 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM-------------IRDNLPPKLK-- 237 (292)
T ss_pred ccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-------------HHhhCCcccC--
Confidence 2335688999999999888899999999999999999999999975432111111 1111111111
Q ss_pred CChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 653 YPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 653 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.....+..+.+++.+||+.||.+||++.+++++
T Consensus 238 ~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 238 NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred CcccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 112345568899999999999999999999975
No 348
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=3.6e-34 Score=294.33 Aligned_cols=244 Identities=27% Similarity=0.417 Sum_probs=196.6
Q ss_pred eccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecCCCCH
Q 005001 418 IGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNL 495 (720)
Q Consensus 418 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 495 (720)
||+|+||.||++... +|+.|++|.+..... .......+.+|++++++++||||+++++.+......++|+||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999876 489999999865433 223456788899999999999999999999999999999999999999
Q ss_pred HHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCc-----
Q 005001 496 HDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER----- 570 (720)
Q Consensus 496 ~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~----- 570 (720)
.++++. ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~l~~----~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 153 (265)
T cd05579 81 ASLLEN----VGSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLND 153 (265)
T ss_pred HHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccc
Confidence 999973 24789999999999999999999999 999999999999999999999999999875433211
Q ss_pred --cccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccc
Q 005001 571 --QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPA 648 (720)
Q Consensus 571 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (720)
.......++..|+|||...+..++.++||||||+++|||++|..||........ ........
T Consensus 154 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~----------------~~~~~~~~ 217 (265)
T cd05579 154 DEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEI----------------FQNILNGK 217 (265)
T ss_pred ccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH----------------HHHHhcCC
Confidence 122334688899999999988899999999999999999999999975442211 11111111
Q ss_pred cCCCCChh--HHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 649 LNGMYPAK--SLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 649 ~~~~~~~~--~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
. ..+.. .+..+.+++.+||+.+|++||++.++.+.|
T Consensus 218 ~--~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 218 I--EWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred c--CCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 1 11222 267889999999999999999995555443
No 349
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=4.8e-34 Score=297.73 Aligned_cols=256 Identities=24% Similarity=0.345 Sum_probs=201.5
Q ss_pred CCCccceeccCCCcEEEEEEE----cCCcEEEEEEccccccC--hHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEF----ANGKIMAVKKIDNAALS--LQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQR 483 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~----~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 483 (720)
+|+..+.||+|+||.||++.. .+++.||+|.++..... ......+.+|++++.++ +||||+++++.+......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 367788999999999999964 35788999998654321 22345678899999999 699999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
++||||+++|+|.+++.. ...+++..+..++.|+++||.|||+. +++||||+|+||+++.++.++|+|||+++
T Consensus 81 ~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~ 153 (288)
T cd05583 81 HLILDYVNGGELFTHLYQ----REHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSK 153 (288)
T ss_pred EEEEecCCCCcHHHHHhh----cCCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECcccc
Confidence 999999999999998862 35688999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCCccccccccccccccCccccccCC--CcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHH
Q 005001 564 LTPNTERQVSTQMVGAFGYSAPEFALSGI--YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDAL 641 (720)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (720)
..............|+..|+|||.+.+.. .+.++||||||+++|||++|..||.......... ...
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~------------~~~ 221 (288)
T cd05583 154 EFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQS------------EIS 221 (288)
T ss_pred ccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHH------------HHH
Confidence 65443332233456899999999987765 7889999999999999999999996432211110 000
Q ss_pred HhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 005001 642 AKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALV 687 (720)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~ 687 (720)
...... ....+...+..+.+++.+||+.||++|||+.++.+.|+
T Consensus 222 ~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~ 265 (288)
T cd05583 222 RRILKS--KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKN 265 (288)
T ss_pred HHHHcc--CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence 111111 11233445667889999999999999999887776553
No 350
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=4e-34 Score=297.33 Aligned_cols=266 Identities=23% Similarity=0.317 Sum_probs=203.3
Q ss_pred CCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEec
Q 005001 412 FSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYV 490 (720)
Q Consensus 412 y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 490 (720)
|+..+.||+|++|.||+|... +++.+++|++............+.+|++++++++|+||+++++++...+..++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 566788999999999999765 6889999998765544445667888999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCc
Q 005001 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER 570 (720)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 570 (720)
++ +|.+++.. ....+++.++..++.|++.||+|||+. +|+|+||||+||+++.++.++|+|||.+.......
T Consensus 81 ~~-~l~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~- 152 (283)
T cd05118 81 DT-DLYKLIKD---RQRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPV- 152 (283)
T ss_pred CC-CHHHHHHh---hcccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-
Confidence 75 88888763 235789999999999999999999999 99999999999999999999999999987665433
Q ss_pred cccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHH--hhccccccHHHHHh---h
Q 005001 571 QVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVR--WATPQLHDIDALAK---M 644 (720)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~---~ 644 (720)
.......++..|+|||.+.+. .++.++||||||+++|+|++|+.||...........+. ...+.......... .
T Consensus 153 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd05118 153 RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARN 232 (283)
T ss_pred ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhh
Confidence 112234578899999999877 78999999999999999999999997654322111110 00000000000000 0
Q ss_pred c---ccccC----CCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 645 V---DPALN----GMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 645 ~---~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
. .+... .......+.++.++|.+||+.||.+||++.+++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 233 YKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 0 00000 00112356789999999999999999999999864
No 351
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=4.6e-34 Score=293.14 Aligned_cols=253 Identities=21% Similarity=0.335 Sum_probs=200.1
Q ss_pred CCCccceeccCCCcEEEEEEEcC-CcEEEEEEccc---cccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDN---AALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~---~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
+|.+.+.||+|+||.||++.... +..+++|.++. ..........+.+|+.+++.++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 47788899999999999997653 34455555432 222333445667889999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
+||+++++|.+++.........+++.++..++.|++.||.|||+. +++|+||||+||+++. +.++|+|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999999999876555567899999999999999999999999 9999999999999975 579999999987654
Q ss_pred CCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
.... ......|++.|+|||.+.+..++.++|+||||+++|+|++|..||...... ....+...
T Consensus 157 ~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~----------------~~~~~~~~ 219 (260)
T cd08222 157 GSCD-LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFL----------------SVVLRIVE 219 (260)
T ss_pred CCcc-cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH----------------HHHHHHHc
Confidence 3322 223356888999999998888999999999999999999999999643211 11111111
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
......+...+.++.++|.+||+.||++||++.+++++
T Consensus 220 -~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 220 -GPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred -CCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 11112344566788999999999999999999999864
No 352
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=2.7e-34 Score=305.84 Aligned_cols=267 Identities=25% Similarity=0.335 Sum_probs=204.9
Q ss_pred CCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecC-----eEE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG-----QRL 484 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~ 484 (720)
+|+..+.||+|+||.||+|... +++.||+|++..........+.+.+|+.+++.++|+||+++.+++...+ ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4788899999999999999875 4899999999765433445677889999999999999999999987765 789
Q ss_pred EEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
+||||+++ +|.++++ ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++..
T Consensus 81 lv~e~~~~-~l~~~l~----~~~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~ 152 (330)
T cd07834 81 IVTELMET-DLHKVIK----SPQPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARG 152 (330)
T ss_pred EEecchhh-hHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEe
Confidence 99999974 8988886 234899999999999999999999999 999999999999999999999999999986
Q ss_pred CCCCCc--cccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHH-hh-ccccc---
Q 005001 565 TPNTER--QVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVR-WA-TPQLH--- 636 (720)
Q Consensus 565 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~-~~-~~~~~--- 636 (720)
...... .......++..|+|||.+.+. .++.++||||||+++|+|++|..||...........+. .. .+...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 232 (330)
T cd07834 153 VDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLK 232 (330)
T ss_pred ecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhh
Confidence 654321 112334688899999999988 78999999999999999999999997655322211111 00 00000
Q ss_pred --cHHHHHhhcc---cccC---CCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 637 --DIDALAKMVD---PALN---GMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 637 --~~~~~~~~~~---~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
........+. .... .......+..+.+++.+||+.||++||++.+++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 233 FITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred hccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0000000000 0000 00112245678899999999999999999999986
No 353
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=6.4e-34 Score=297.13 Aligned_cols=254 Identities=24% Similarity=0.359 Sum_probs=199.6
Q ss_pred CCCccceeccCCCcEEEEEEE----cCCcEEEEEEcccccc--ChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEF----ANGKIMAVKKIDNAAL--SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQR 483 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 483 (720)
+|+..+.||+|+||.||+|.. .+|+.||+|.+..... .....+.+.+|++++.++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 367788999999999999976 3688999999865432 122345678899999999 699999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
++|+||+++++|.+++.. ...+++..+..++.|++.||.|||+. +++||||+|+||+++.++.+||+|||++.
T Consensus 81 ~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 153 (290)
T cd05613 81 HLILDYINGGELFTHLSQ----RERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSK 153 (290)
T ss_pred EEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccce
Confidence 999999999999999863 45688999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCCccccccccccccccCccccccC--CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHH
Q 005001 564 LTPNTERQVSTQMVGAFGYSAPEFALSG--IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDAL 641 (720)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (720)
..............|+..|+|||.+.+. .++.++||||||+++|+|++|..||......... ..+
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~-------------~~~ 220 (290)
T cd05613 154 EFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQ-------------AEI 220 (290)
T ss_pred ecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccH-------------HHH
Confidence 6543322222345689999999998763 4678999999999999999999999643221111 011
Q ss_pred HhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 005001 642 AKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRP-----PMSEVVQA 685 (720)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~ell~~ 685 (720)
.+.+... ...++...+..+.+++.+||+.||++|| ++.+++++
T Consensus 221 ~~~~~~~-~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 221 SRRILKS-EPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred HHHhhcc-CCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 1111111 1123445667788999999999999997 66777654
No 354
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=8.1e-34 Score=297.27 Aligned_cols=254 Identities=26% Similarity=0.422 Sum_probs=196.7
Q ss_pred hcCCCccceeccCCCcEEEEEEEcC-CcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV 486 (720)
.++|+..+.||+|+||.||+|.+.+ ++.||+|.++..... .....+.+|+..+.+. +||||+++++++......++|
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v 92 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK-EENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC 92 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh-HHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence 3568888999999999999998864 889999998754322 2345566677666555 599999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||+. ++|.+++.. ....+++..+..++.|++.||+|||+.. +|+||||+|+||+++.++.+||+|||++....
T Consensus 93 ~e~~~-~~l~~l~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~ 166 (296)
T cd06618 93 MELMS-TCLDKLLKR---IQGPIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRLV 166 (296)
T ss_pred eeccC-cCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccccchhcc
Confidence 99985 478777653 2347899999999999999999999742 89999999999999999999999999987654
Q ss_pred CCCccccccccccccccCccccccCC----CcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSGI----YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
.... .....++..|+|||.+.+.. ++.++||||||+++|||++|+.||....... +.+.
T Consensus 167 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---------------~~~~ 229 (296)
T cd06618 167 DSKA--KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEF---------------EVLT 229 (296)
T ss_pred CCCc--ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHH---------------HHHH
Confidence 3221 12335788999999987654 7899999999999999999999996532210 1111
Q ss_pred hhccccc-CCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 643 KMVDPAL-NGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 643 ~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
+...... ........+.++.+++.+||+.||++||++.+++++-
T Consensus 230 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 230 KILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred HHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 1111111 1111123567789999999999999999999999773
No 355
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=6.3e-34 Score=292.13 Aligned_cols=243 Identities=22% Similarity=0.275 Sum_probs=189.0
Q ss_pred ceeccCCCcEEEEEEEc-CCcEEEEEEccccccC-hHHHHHHHHHHHH-hhcCCCCCccccceEEeecCeEEEEEEecCC
Q 005001 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSN-MSRLRHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 492 (720)
+.||+|+||.||+|... +++.||+|.+...... ......+..|..+ ....+|+|++++++++...+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46899999999999764 5889999998654322 1222334444443 4455899999999999999999999999999
Q ss_pred CCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccc
Q 005001 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (720)
Q Consensus 493 gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 572 (720)
++|.++++. ...+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||++.....
T Consensus 82 ~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----- 149 (260)
T cd05611 82 GDCASLIKT----LGGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----- 149 (260)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc-----
Confidence 999999963 35689999999999999999999999 999999999999999999999999999875432
Q ss_pred cccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCC
Q 005001 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGM 652 (720)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (720)
.....|+..|+|||.+.+..++.++||||||+++|||++|..||............. .. .......
T Consensus 150 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~------------~~--~~~~~~~ 215 (260)
T cd05611 150 NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNIL------------SR--RINWPEE 215 (260)
T ss_pred cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH------------hc--ccCCCCc
Confidence 223468889999999998889999999999999999999999997543321110000 00 0001111
Q ss_pred CChhHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 005001 653 YPAKSLSRFADIIALCVQPEPEFRPPMSEVVQ 684 (720)
Q Consensus 653 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~ 684 (720)
.....+..+.+++.+||+.||++||++.++.+
T Consensus 216 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~ 247 (260)
T cd05611 216 VKEFCSPEAVDLINRLLCMDPAKRLGANGYQE 247 (260)
T ss_pred ccccCCHHHHHHHHHHccCCHHHccCCCcHHH
Confidence 22245678899999999999999997765443
No 356
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=7.9e-34 Score=300.00 Aligned_cols=263 Identities=22% Similarity=0.327 Sum_probs=193.4
Q ss_pred eeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecCCCCHH
Q 005001 417 LIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLH 496 (720)
Q Consensus 417 ~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 496 (720)
.+|.|+++.||++.. +++.||+|++............+.+|++.++.++|+||+++++++...+..+++|||+++|+|.
T Consensus 9 ~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 87 (314)
T cd08216 9 CFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCE 87 (314)
T ss_pred hhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHH
Confidence 344444544444444 6899999999765445556778999999999999999999999999999999999999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCc------
Q 005001 497 DMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER------ 570 (720)
Q Consensus 497 ~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~------ 570 (720)
++++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+........
T Consensus 88 ~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~ 162 (314)
T cd08216 88 DLLKTH--FPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVH 162 (314)
T ss_pred HHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeeccccccccccc
Confidence 999743 234688999999999999999999999 999999999999999999999999998865432211
Q ss_pred cccccccccccccCccccccC--CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchh-hHHHhhccc-cccHH--H----
Q 005001 571 QVSTQMVGAFGYSAPEFALSG--IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQ-SLVRWATPQ-LHDID--A---- 640 (720)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~-~~~~~~~~~-~~~~~--~---- 640 (720)
.......++..|+|||++.+. .++.++|||||||++|||++|+.||......... ....-..+. +.... .
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
T cd08216 163 DFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDS 242 (314)
T ss_pred cccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCC
Confidence 111234577889999998763 5889999999999999999999999754322111 000000000 00000 0
Q ss_pred HHh----hccc----ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 641 LAK----MVDP----ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 641 ~~~----~~~~----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
... .... ............++.+++.+||+.||++||++++++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 243 MSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred cCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 000 0000 01111223345678899999999999999999999976
No 357
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=8.2e-34 Score=292.46 Aligned_cols=247 Identities=20% Similarity=0.293 Sum_probs=191.2
Q ss_pred HHHhcCCCcccee--ccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhc-CCCCCccccceEEeecC
Q 005001 406 QTATNSFSQEFLI--GEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR-LRHPNIVTLAGYCAEHG 481 (720)
Q Consensus 406 ~~~~~~y~~~~~l--G~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~ 481 (720)
....+.|+..+.+ |+|+||.||++..+ ++..+|+|.+........ |+..... .+||||+++++++...+
T Consensus 10 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-------e~~~~~~~~~h~~iv~~~~~~~~~~ 82 (267)
T PHA03390 10 VQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-------EPMVHQLMKDNPNFIKLYYSVTTLK 82 (267)
T ss_pred HHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-------hHHHHHHhhcCCCEEEEEEEEecCC
Confidence 3344566666665 99999999999764 678899998865432211 1111111 27999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCC-ceEEcccC
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL-NPHLSDCG 560 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~-~~kl~Dfg 560 (720)
..++||||+++++|.++++. ...+++.++..++.|+++||.|||+. +++||||||+||+++.++ .++|+|||
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~dfg 155 (267)
T PHA03390 83 GHVLIMDYIKDGDLFDLLKK----EGKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYG 155 (267)
T ss_pred eeEEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecCc
Confidence 99999999999999999972 34889999999999999999999999 999999999999999998 99999999
Q ss_pred CCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHH
Q 005001 561 LAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDA 640 (720)
Q Consensus 561 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 640 (720)
++...... ....|+..|+|||++.+..++.++||||||+++|||++|+.||........ .. ..
T Consensus 156 ~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~-~~-----------~~ 218 (267)
T PHA03390 156 LCKIIGTP-----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEEL-DL-----------ES 218 (267)
T ss_pred cceecCCC-----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchh-hH-----------HH
Confidence 98765332 224688999999999999999999999999999999999999975432210 00 11
Q ss_pred HHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCC-HHHHHHH
Q 005001 641 LAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPP-MSEVVQA 685 (720)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~ell~~ 685 (720)
+...... ....+...+..+.+++.+||+.||.+||+ +++++++
T Consensus 219 ~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 219 LLKRQQK--KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred HHHhhcc--cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence 1111111 11223356678899999999999999996 5888753
No 358
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=2e-33 Score=296.58 Aligned_cols=246 Identities=28% Similarity=0.444 Sum_probs=196.4
Q ss_pred CCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 412 FSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 412 y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
|...+.||+|+||.||+|... +++.|++|++..... .......+.+|+++++.++|||++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 566678999999999999764 688999999864432 233446788899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
+. |++.+++.. ....+++.++..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 103 ~~-~~l~~~l~~---~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~-- 173 (313)
T cd06633 103 CL-GSASDLLEV---HKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSP-- 173 (313)
T ss_pred CC-CCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCC--
Confidence 96 578777752 245689999999999999999999999 999999999999999999999999999864322
Q ss_pred ccccccccccccccCccccc---cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 570 RQVSTQMVGAFGYSAPEFAL---SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
.....|+..|+|||++. +..++.++|||||||++|||++|..||........... ...
T Consensus 174 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~----------------~~~ 234 (313)
T cd06633 174 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH----------------IAQ 234 (313)
T ss_pred ---CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH----------------HHh
Confidence 12356889999999985 45688999999999999999999999976543211111 100
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
...........+..+.+++.+||+.+|++||++.+++++
T Consensus 235 ~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 235 NDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred cCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011111122344568899999999999999999999975
No 359
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=8.8e-34 Score=298.65 Aligned_cols=249 Identities=29% Similarity=0.431 Sum_probs=198.1
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
+.|...+.||+|+||.||+|... +++.+|+|.+..... .......+.+|+++++.++|+|++++.+++......++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 34667788999999999999765 578899998864322 3334567888999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+. |+|.+++.. ....+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||++.....
T Consensus 95 e~~~-~~l~~~~~~---~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 167 (308)
T cd06634 95 EYCL-GSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 167 (308)
T ss_pred EccC-CCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecC
Confidence 9996 588877752 235689999999999999999999999 999999999999999999999999999875433
Q ss_pred CCccccccccccccccCccccc---cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhh
Q 005001 568 TERQVSTQMVGAFGYSAPEFAL---SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKM 644 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (720)
. ....|++.|+|||.+. ...++.++|||||||++|||++|..||......... ...
T Consensus 168 ~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~----------------~~~ 226 (308)
T cd06634 168 A-----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL----------------YHI 226 (308)
T ss_pred c-----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHH----------------HHH
Confidence 2 2346888999999975 356788999999999999999999998653321111 011
Q ss_pred cccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 645 VDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 645 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
.........+...+..+.++|.+||+.+|++||++.+++++-
T Consensus 227 ~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 227 AQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred hhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence 111111111234566788999999999999999999999774
No 360
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=5e-34 Score=305.04 Aligned_cols=267 Identities=19% Similarity=0.305 Sum_probs=199.9
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec------C
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH------G 481 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 481 (720)
.++|...+.||+|+||.||+|... +|+.||+|++............+.+|+.+++.++||||+++++++... .
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 468889999999999999999764 689999999875443333345678999999999999999999998654 3
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCC
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 561 (720)
..++|+||+.. +|..++ ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||+
T Consensus 94 ~~~lv~e~~~~-~l~~~~------~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~ 163 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIM------GHPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGL 163 (342)
T ss_pred eEEEEeccccc-CHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCC
Confidence 46999999964 776654 24688999999999999999999999 999999999999999999999999999
Q ss_pred CccCCCCCccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHH
Q 005001 562 AALTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDA 640 (720)
Q Consensus 562 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 640 (720)
++..... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||.+.........+....+ ......
T Consensus 164 ~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~ 238 (342)
T cd07879 164 ARHADAE----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTG-VPGPEF 238 (342)
T ss_pred CcCCCCC----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC-CCCHHH
Confidence 8764322 223567889999999876 4688999999999999999999999986543221111111000 000000
Q ss_pred HH--------hhcc--ccc-CCCC---ChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH--HHHHH
Q 005001 641 LA--------KMVD--PAL-NGMY---PAKSLSRFADIIALCVQPEPEFRPPMSEVVQA--LVRLV 690 (720)
Q Consensus 641 ~~--------~~~~--~~~-~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~--L~~~~ 690 (720)
.. .... +.. +... ....+..+.+++.+||+.||++||++.+++++ ++++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 239 VQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred HHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence 00 0000 000 0000 01234568899999999999999999999966 66653
No 361
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=9.5e-34 Score=300.83 Aligned_cols=267 Identities=24% Similarity=0.346 Sum_probs=202.3
Q ss_pred HHHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEee-cCeE
Q 005001 406 QTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE-HGQR 483 (720)
Q Consensus 406 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~ 483 (720)
...+++|+..+.||+|+||.||+|... +++.||+|++............+.+|+++++.++||||+++.+++.. ....
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 85 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDI 85 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcE
Confidence 345788999999999999999999755 78999999986544334445677889999999999999999998865 4578
Q ss_pred EEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
++|+||+ +++|.++++ ...+++..+..++.|+++||+|||+. +|+||||+|+||+++.++.++|+|||.+.
T Consensus 86 ~lv~e~~-~~~L~~~~~-----~~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~ 156 (328)
T cd07856 86 YFVTELL-GTDLHRLLT-----SRPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLAR 156 (328)
T ss_pred EEEeehh-ccCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCcccccc
Confidence 9999998 568988885 35678888999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHH-Hhh-ccc------
Q 005001 564 LTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLV-RWA-TPQ------ 634 (720)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~-~~~-~~~------ 634 (720)
..... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...........+ ... .+.
T Consensus 157 ~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (328)
T cd07856 157 IQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINT 232 (328)
T ss_pred ccCCC----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 54321 123467889999998866 56899999999999999999999999765432111111 000 000
Q ss_pred cccHHHHHhhcccccCCCCC-----hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 635 LHDIDALAKMVDPALNGMYP-----AKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
...................+ ...+..+.++|++||+.+|++||++.+++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 233 ICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred ccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000000001111111 1245678999999999999999999999876
No 362
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.1e-33 Score=301.24 Aligned_cols=266 Identities=22% Similarity=0.278 Sum_probs=195.8
Q ss_pred CCCccceeccCCCcEEEEEEEc-C--CcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEee----cCe
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA-N--GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAE----HGQ 482 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~----~~~ 482 (720)
+|...+.||+|+||.||++... . +..||+|++............+.+|+.+++++ +||||+++++.+.. ...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4777889999999999999765 3 77899999875433333456678899999988 59999999987533 245
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCC
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a 562 (720)
.++++||+. ++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 81 ~~~~~e~~~-~~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a 152 (332)
T cd07857 81 LYLYEELME-ADLHQIIR----SGQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLA 152 (332)
T ss_pred EEEEEeccc-CCHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCc
Confidence 788999886 58998885 346789999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCcc---ccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccH
Q 005001 563 ALTPNTERQ---VSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDI 638 (720)
Q Consensus 563 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 638 (720)
......... ......||..|+|||.+.+ ..++.++||||+||++|+|++|..||................. ....
T Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~ 231 (332)
T cd07857 153 RGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLG-TPDE 231 (332)
T ss_pred eecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhC-CCCH
Confidence 765432211 1233578999999998766 4689999999999999999999999976543211111000000 0000
Q ss_pred HHHHhh-----------cccccCCC---CChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 639 DALAKM-----------VDPALNGM---YPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 639 ~~~~~~-----------~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+...+. ........ .....+..+.+++.+||+.||++||++.+++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 232 ETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred HHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000000 00000000 011234678899999999999999999999865
No 363
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=7.5e-34 Score=299.62 Aligned_cols=270 Identities=26% Similarity=0.351 Sum_probs=198.1
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec-------
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH------- 480 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------- 480 (720)
.++|+..+.||+|+||.||+|... +++.+|+|++............+.+|+++++.++||||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 468999999999999999999765 688999999865443333344567899999999999999999987543
Q ss_pred -CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEccc
Q 005001 481 -GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDC 559 (720)
Q Consensus 481 -~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Df 559 (720)
...++|+||+.+ +|.+.+.. ....+++.++..++.|+++||+|||+. +|+|+||||+||++++++.++|+||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~---~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~df 159 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLEN---PSVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADF 159 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcC
Confidence 346999999975 77776652 345799999999999999999999999 9999999999999999999999999
Q ss_pred CCCccCCCCCcc----------ccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHH
Q 005001 560 GLAALTPNTERQ----------VSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLV 628 (720)
Q Consensus 560 g~a~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~ 628 (720)
|+++........ ......|++.|+|||.+.+. .++.++|||||||++|||++|+.||...........+
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~ 239 (311)
T cd07866 160 GLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLI 239 (311)
T ss_pred ccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 998765432211 11234578889999988754 5789999999999999999999999765543222211
Q ss_pred H-hhc-c---ccccHHHHHhhcccccCCCCC-------hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 629 R-WAT-P---QLHDIDALAKMVDPALNGMYP-------AKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 629 ~-~~~-~---~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
. ... + .+..................+ ......+.+++.+||+.||++||++.|++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 240 FKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 1 100 0 000000001000000000001 1123568899999999999999999998853
No 364
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.4e-33 Score=293.97 Aligned_cols=265 Identities=23% Similarity=0.320 Sum_probs=196.3
Q ss_pred CCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcC---CCCCccccceEEeecCe-----
Q 005001 412 FSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL---RHPNIVTLAGYCAEHGQ----- 482 (720)
Q Consensus 412 y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~----- 482 (720)
|+..+.||+|+||.||+|.+. +++.||+|++............+.+|+.+++++ +||||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567789999999999999876 489999999975433332334555676665544 69999999999988776
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCC
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a 562 (720)
.+++|||+.+ +|.+++.... ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~ 154 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCP--KPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLA 154 (287)
T ss_pred eEEEehhccc-CHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcc
Confidence 8999999975 8998886422 24689999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHH-Hhhccccc-----
Q 005001 563 ALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLV-RWATPQLH----- 636 (720)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~-~~~~~~~~----- 636 (720)
........ .....++..|+|||.+.+..++.++|||||||++|||++|..||...........+ ........
T Consensus 155 ~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07838 155 RIYSFEMA--LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPR 232 (287)
T ss_pred eeccCCcc--cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCC
Confidence 76543221 12345788999999999999999999999999999999999999765432211111 10000000
Q ss_pred ----cHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 637 ----DIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 637 ----~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
............. .......+..+.+++.+||+.||.+||++.+++++
T Consensus 233 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 233 NVSLPRSSFPSYTPRSF-KSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred Ccccchhhcccccccch-hhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 0000000000000 00112345678899999999999999999999854
No 365
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=9.2e-34 Score=303.26 Aligned_cols=271 Identities=20% Similarity=0.296 Sum_probs=203.7
Q ss_pred hhcHHHHhcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec
Q 005001 402 VASLQTATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH 480 (720)
Q Consensus 402 ~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 480 (720)
..++....++|...+.||+|+||.||+|.. .+++.||+|++............+.+|+.++++++||||+++++++...
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~ 88 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 88 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence 445666778999999999999999999965 4789999999976543444456788899999999999999999987543
Q ss_pred ------CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCce
Q 005001 481 ------GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNP 554 (720)
Q Consensus 481 ------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~ 554 (720)
...+++++++ +++|.++++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 89 ~~~~~~~~~~lv~~~~-~~~L~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~ 159 (345)
T cd07877 89 RSLEEFNDVYLVTHLM-GADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCEL 159 (345)
T ss_pred ccccccccEEEEehhc-ccCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCE
Confidence 3467888877 679988875 34689999999999999999999999 99999999999999999999
Q ss_pred EEcccCCCccCCCCCccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhH-HHhhc
Q 005001 555 HLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSL-VRWAT 632 (720)
Q Consensus 555 kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~-~~~~~ 632 (720)
||+|||++...... .....|+..|+|||.+.+ ..++.++|||||||++|||++|+.||........... .....
T Consensus 160 kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 235 (345)
T cd07877 160 KILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 235 (345)
T ss_pred EEeccccccccccc----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 99999998764322 233568899999999876 5688999999999999999999999975443221111 11000
Q ss_pred -------cccccH--HHHHhhcccccCC---CCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 633 -------PQLHDI--DALAKMVDPALNG---MYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 633 -------~~~~~~--~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+..... ............. ......+..+.++|.+|++.||++||++.+++.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 236 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred CCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 000000 0000000000000 0011235568899999999999999999999976
No 366
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-35 Score=280.21 Aligned_cols=250 Identities=25% Similarity=0.361 Sum_probs=196.6
Q ss_pred cceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHH-hhcCCCCCccccceEEeecCeEEEEEEecCC
Q 005001 415 EFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSN-MSRLRHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (720)
Q Consensus 415 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 492 (720)
...||.|+||+|++..++ .|+.+|||+++.... ..+..+++.|.+. ++.-+.||||+++|+...++..|+.||.|+-
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~-~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~ 147 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI-EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI 147 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc-hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh
Confidence 457999999999999765 699999999987765 3455667777765 4455899999999999999999999999965
Q ss_pred CCHHHHhhh-ccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCcc
Q 005001 493 GNLHDMLHF-ADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571 (720)
Q Consensus 493 gsL~~~l~~-~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 571 (720)
+|+.+.+. +......+++....+|..-...||.||.+.. .|||||+||+|||++..|.+||+|||++..+.+. .
T Consensus 148 -SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S--i 222 (361)
T KOG1006|consen 148 -SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS--I 222 (361)
T ss_pred -hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHHH--H
Confidence 88776543 2224567889988899999999999999874 9999999999999999999999999998765332 2
Q ss_pred ccccccccccccCcccccc--CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccccc
Q 005001 572 VSTQMVGAFGYSAPEFALS--GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPAL 649 (720)
Q Consensus 572 ~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (720)
..+.-+|...|||||.+.. ..|+.++||||||++|||+.||+.||.+++.. .+.+..++....
T Consensus 223 AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~sv---------------feql~~Vv~gdp 287 (361)
T KOG1006|consen 223 AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSV---------------FEQLCQVVIGDP 287 (361)
T ss_pred HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHH---------------HHHHHHHHcCCC
Confidence 2334578889999999974 34899999999999999999999999875431 122222221111
Q ss_pred -CCCCC---hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 650 -NGMYP---AKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 650 -~~~~~---~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
...++ .+....+.++|..|+.+|-.+||.+.++.+.
T Consensus 288 p~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 288 PILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred CeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 11112 2356678999999999999999999999876
No 367
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=2.6e-33 Score=291.29 Aligned_cols=265 Identities=25% Similarity=0.344 Sum_probs=198.4
Q ss_pred CCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCC-CCCccccceEEeecCeEEEEEEe
Q 005001 412 FSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 412 y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
|...+.||+|+||+||+|... +++.|++|++...... .......+|+..+++++ |+||+++++++..++..++||||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 79 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEY 79 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc-hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEec
Confidence 566789999999999999875 5788999998654332 23344567888999998 99999999999999999999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
+ +|+|.+++.... ...+++..+..++.|++.+|.|||+. +++|+||+|+||+++.++.++|+|||++.......
T Consensus 80 ~-~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (283)
T cd07830 80 M-EGNLYQLMKDRK--GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP 153 (283)
T ss_pred C-CCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCC
Confidence 9 779999886322 35789999999999999999999998 99999999999999999999999999987654322
Q ss_pred ccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhH-HHhhccccc----cHHHHHh
Q 005001 570 RQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSL-VRWATPQLH----DIDALAK 643 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~-~~~~~~~~~----~~~~~~~ 643 (720)
. .....++..|+|||.+.+ ..++.++|+||||+++|||++|+.||........... ......... +......
T Consensus 154 ~--~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07830 154 P--YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLAS 231 (283)
T ss_pred C--cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhc
Confidence 2 223468889999998854 4578999999999999999999999976543222111 111000000 0000000
Q ss_pred hcccccCC-------CCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 644 MVDPALNG-------MYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 644 ~~~~~~~~-------~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
........ ......+..+.+++++||+.||++||+++|++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 232 KLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred cccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 00000000 0011124678899999999999999999999754
No 368
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=1.3e-33 Score=301.93 Aligned_cols=265 Identities=20% Similarity=0.317 Sum_probs=201.7
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCe----
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ---- 482 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~---- 482 (720)
..++|+..+.||+|+||.||+|... +++.||+|++............+.+|+.++++++||||+++.+++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4578999999999999999999875 57899999987544344445667889999999999999999998766554
Q ss_pred --EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccC
Q 005001 483 --RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (720)
Q Consensus 483 --~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 560 (720)
.++|+||+ +++|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~-----~~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVK-----CQKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred ccEEEEEecC-CCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccc
Confidence 89999998 569999886 35799999999999999999999999 99999999999999999999999999
Q ss_pred CCccCCCCCccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHH-Hhhccc----
Q 005001 561 LAALTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLV-RWATPQ---- 634 (720)
Q Consensus 561 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~-~~~~~~---- 634 (720)
++...... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...........+ ......
T Consensus 164 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~ 239 (343)
T cd07851 164 LARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEEL 239 (343)
T ss_pred cccccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHH
Confidence 98765432 233467889999999865 36789999999999999999999999765432211111 100000
Q ss_pred ---cc--cHHHHHhhcccccCCCC---ChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 635 ---LH--DIDALAKMVDPALNGMY---PAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 635 ---~~--~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+. ................+ ....+..+.+++.+||+.||++|||+.+|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 240 LQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred HhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 00 00000000000000000 01235678999999999999999999999875
No 369
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.6e-33 Score=301.08 Aligned_cols=265 Identities=19% Similarity=0.276 Sum_probs=200.0
Q ss_pred HhcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecC-----
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG----- 481 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 481 (720)
..++|+..+.||+|+||.||+|.. .++..||+|++............+.+|+.+++.++||||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 467899999999999999999965 46899999998654433444566889999999999999999999886543
Q ss_pred -eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccC
Q 005001 482 -QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (720)
Q Consensus 482 -~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 560 (720)
..++||||+ +++|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~-----~~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMK-----HEKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred ceEEEEEecC-CCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecc
Confidence 458999998 679998885 35789999999999999999999999 99999999999999999999999999
Q ss_pred CCccCCCCCccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhH-HHhhcccc---
Q 005001 561 LAALTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSL-VRWATPQL--- 635 (720)
Q Consensus 561 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~-~~~~~~~~--- 635 (720)
++...... .....+++.|+|||.+.+ ..++.++|+||||+++|+|++|+.||........... ........
T Consensus 164 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 239 (343)
T cd07880 164 LARQTDSE----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEF 239 (343)
T ss_pred cccccccC----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 98765332 123467889999999876 4578999999999999999999999976543211111 11000000
Q ss_pred ----c--cHHHHHhhcccccCC---CCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 636 ----H--DIDALAKMVDPALNG---MYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 636 ----~--~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
. ........+...... ......+..+.+++.+|++.||++||++.+++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 240 VQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred HHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 000000000000000 0112344568899999999999999999999954
No 370
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2e-35 Score=277.08 Aligned_cols=269 Identities=22% Similarity=0.357 Sum_probs=204.7
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEee--------c
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE--------H 480 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--------~ 480 (720)
..|+...+||+|.||+||+|+.. +|+.||+|++--+..........++|+.++..++|+|++.+++.|.. .
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 34666778999999999999765 57788988774332223334566899999999999999999988754 2
Q ss_pred CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccC
Q 005001 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (720)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 560 (720)
...|+||++|+. +|..++. .....++..++.++++++..||.|+|.. .|+|||+||.|+||+.+|.+||+|||
T Consensus 97 ~t~ylVf~~ceh-DLaGlLs---n~~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFG 169 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLS---NRKVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFG 169 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhc---CccccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeeccc
Confidence 357999999987 8988886 3457899999999999999999999999 99999999999999999999999999
Q ss_pred CCccCCCCCccc---cccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHh------
Q 005001 561 LAALTPNTERQV---STQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRW------ 630 (720)
Q Consensus 561 ~a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~------ 630 (720)
+++.+....... .+..+-|..|++||.+.+. .|+++.|||..||++.||+||.+-+.+..+......+..
T Consensus 170 lar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~t 249 (376)
T KOG0669|consen 170 LARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSIT 249 (376)
T ss_pred cccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCC
Confidence 997654332222 2345679999999999875 589999999999999999999998887766544444431
Q ss_pred --hccccccHHHHHhhccccc-CCCC--------ChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 631 --ATPQLHDIDALAKMVDPAL-NGMY--------PAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 631 --~~~~~~~~~~~~~~~~~~~-~~~~--------~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+.|...+...+..+-.+.+ .+.+ |..-.++..+|+.+++..||.+|+++++++.+
T Consensus 250 kevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 250 KEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred cccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 1233333333333211111 1111 11223467899999999999999999998866
No 371
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2.7e-33 Score=298.72 Aligned_cols=268 Identities=24% Similarity=0.312 Sum_probs=198.1
Q ss_pred hcCCCc-cceeccCCCcEEEEEEEc-CCcEEEEEEccccccChH------------HHHHHHHHHHHhhcCCCCCccccc
Q 005001 409 TNSFSQ-EFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQ------------EEDNFLEAVSNMSRLRHPNIVTLA 474 (720)
Q Consensus 409 ~~~y~~-~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~------------~~~~~~~e~~~l~~l~h~niv~l~ 474 (720)
.++|.. .+.||+|+||.||+|... +++.||+|++........ ....+.+|+++++.++|+||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 345654 467999999999999765 689999999865432210 012467899999999999999999
Q ss_pred eEEeecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCce
Q 005001 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNP 554 (720)
Q Consensus 475 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~ 554 (720)
+++...+..++||||+. |+|.+++. ....+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~-~~l~~~l~----~~~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~ 158 (335)
T PTZ00024 87 DVYVEGDFINLVMDIMA-SDLKKVVD----RKIRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGIC 158 (335)
T ss_pred EEEecCCcEEEEEeccc-cCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCE
Confidence 99999999999999997 58999886 345689999999999999999999998 99999999999999999999
Q ss_pred EEcccCCCccCCCCC-------------ccccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCC
Q 005001 555 HLSDCGLAALTPNTE-------------RQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSR 620 (720)
Q Consensus 555 kl~Dfg~a~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~ 620 (720)
+|+|||++....... ........++..|+|||.+.+. .++.++|||||||++|||++|+.||....
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~ 238 (335)
T PTZ00024 159 KIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGEN 238 (335)
T ss_pred EECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999987654111 1111223568899999998764 46899999999999999999999997655
Q ss_pred CcchhhHH-Hhh-ccc---cccHHHHHhh------cccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 621 PRSEQSLV-RWA-TPQ---LHDIDALAKM------VDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 621 ~~~~~~~~-~~~-~~~---~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.......+ ... .+. +......... ...... ......+.++.+++.+||+.+|++||++.|++.+
T Consensus 239 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 239 EIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLK-TIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred HHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHH-HhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 43221111 110 000 0000000000 000000 0011235678899999999999999999999964
No 372
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-34 Score=277.18 Aligned_cols=255 Identities=23% Similarity=0.365 Sum_probs=199.6
Q ss_pred cceeccCCCcEEEEE-EEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEEEEEecCC
Q 005001 415 EFLIGEGSLGRVYRA-EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (720)
Q Consensus 415 ~~~lG~G~fg~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 492 (720)
.+.||+|+|+.|-.+ ...+|..||||++.+. ......+..+|++++..+ .|+||++++++|+++...|+|||.|.|
T Consensus 83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq--~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~G 160 (463)
T KOG0607|consen 83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ--PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRG 160 (463)
T ss_pred HHHhcCccceeeeeeeeeccchhhhhhhhhcC--CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccC
Confidence 347999999999988 4578999999999765 445678889999999988 799999999999999999999999999
Q ss_pred CCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCc---eEEcccCCCccCCCCC
Q 005001 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN---PHLSDCGLAALTPNTE 569 (720)
Q Consensus 493 gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~---~kl~Dfg~a~~~~~~~ 569 (720)
|+|..+|+ ....+++.++.++.++|+.||.+||.+ ||.|||+||+|||-..... +||+||.+..-.....
T Consensus 161 GplLshI~----~~~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~ 233 (463)
T KOG0607|consen 161 GPLLSHIQ----KRKHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNN 233 (463)
T ss_pred chHHHHHH----HhhhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeeccccccccccCC
Confidence 99999998 357899999999999999999999999 9999999999999976554 7999998875332111
Q ss_pred c--cc----cccccccccccCccccc-----cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcccc---
Q 005001 570 R--QV----STQMVGAFGYSAPEFAL-----SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQL--- 635 (720)
Q Consensus 570 ~--~~----~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~--- 635 (720)
+ .. -...+|+..|||||+.. ...|+.+.|.||||||+|-|+.|++||.+.-..+- -|...+.
T Consensus 234 ~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC----GWdrGe~Cr~ 309 (463)
T KOG0607|consen 234 DCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC----GWDRGEVCRV 309 (463)
T ss_pred CCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC----CccCCCccHH
Confidence 1 11 12357888999999874 24488999999999999999999999986543211 0111111
Q ss_pred ccHHHHHhhcccccCCCCCh----hHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 005001 636 HDIDALAKMVDPALNGMYPA----KSLSRFADIIALCVQPEPEFRPPMSEVVQ 684 (720)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~dP~~RPs~~ell~ 684 (720)
.+...+..+-+..+. +|. ..+.+..+++...+..|+..|.++.++++
T Consensus 310 CQ~~LFesIQEGkYe--FPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 310 CQNKLFESIQEGKYE--FPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred HHHHHHHHHhccCCc--CChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 111222222222222 333 35567789999999999999999999887
No 373
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=4.7e-33 Score=283.73 Aligned_cols=238 Identities=28% Similarity=0.394 Sum_probs=196.5
Q ss_pred eccCCCcEEEEEEEc-CCcEEEEEEccccccC-hHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecCCCCH
Q 005001 418 IGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNL 495 (720)
Q Consensus 418 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 495 (720)
||+|+||.||++... +++.+++|.+...... ......+.+|+.++++++|+||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999775 5889999998755432 23456788999999999999999999999999999999999999999
Q ss_pred HHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCcccccc
Q 005001 496 HDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQ 575 (720)
Q Consensus 496 ~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 575 (720)
.+++.. ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||.+....... .....
T Consensus 81 ~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~ 152 (250)
T cd05123 81 FSHLSK----EGRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTNT 152 (250)
T ss_pred HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCC-CcccC
Confidence 999963 34689999999999999999999998 99999999999999999999999999987654432 12234
Q ss_pred ccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCCCh
Q 005001 576 MVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPA 655 (720)
Q Consensus 576 ~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (720)
..++..|+|||.+.+...+.++|+||||+++|||++|..||...... ........ .....+.
T Consensus 153 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~----------------~~~~~~~~--~~~~~~~ 214 (250)
T cd05123 153 FCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRK----------------EIYEKILK--DPLRFPE 214 (250)
T ss_pred CcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH----------------HHHHHHhc--CCCCCCC
Confidence 56888999999999888999999999999999999999999754321 01111111 1123444
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCCHHH
Q 005001 656 KSLSRFADIIALCVQPEPEFRPPMSE 681 (720)
Q Consensus 656 ~~~~~l~~li~~cl~~dP~~RPs~~e 681 (720)
..+..+.+++++||..||++||++.+
T Consensus 215 ~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 215 FLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 55778899999999999999999954
No 374
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=2.4e-33 Score=291.29 Aligned_cols=265 Identities=25% Similarity=0.350 Sum_probs=201.0
Q ss_pred CCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEec
Q 005001 412 FSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYV 490 (720)
Q Consensus 412 y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 490 (720)
|+..+.||+|+||.||+|... +++.||+|.+............+..|+.++++++|+||+++++++.+.+..++|+||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 556778999999999999776 5899999999765433334566778999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCc
Q 005001 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER 570 (720)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 570 (720)
+ ++|.+++... ...+++..+..++.|++.||+|||+. +|+||||+|+||++++++.++|+|||.+........
T Consensus 81 ~-~~l~~~i~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 153 (282)
T cd07829 81 D-MDLKKYLDKR---PGPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR 153 (282)
T ss_pred C-cCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCcc
Confidence 8 5999999732 25789999999999999999999999 999999999999999999999999999876544322
Q ss_pred cccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhh-HHHhhccccc-cHHHHHhh---
Q 005001 571 QVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQS-LVRWATPQLH-DIDALAKM--- 644 (720)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~--- 644 (720)
......++..|+|||.+.+. .++.++|||||||++|||++|+.||.......... .......... .+......
T Consensus 154 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (282)
T cd07829 154 -TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDY 232 (282)
T ss_pred -ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccc
Confidence 12234567789999998876 78999999999999999999999997654321111 1110000000 00000000
Q ss_pred ---c----ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 645 ---V----DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 645 ---~----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
. ........ ...+..+.+++.+||+.||++||++.+++.+
T Consensus 233 ~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 233 KPTFPKFPPKDLEKVL-PRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred cccccccCccchHHhc-ccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 0 00000001 1125678999999999999999999999863
No 375
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1.8e-33 Score=300.74 Aligned_cols=266 Identities=23% Similarity=0.294 Sum_probs=196.5
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec-------
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH------- 480 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------- 480 (720)
..+|...+.||.|+||.||+|... +|+.||+|++..... ...+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED 81 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccc
Confidence 367889999999999999999764 688999999865432 3456688899999999999999999876543
Q ss_pred -------CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC-CC
Q 005001 481 -------GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD-EL 552 (720)
Q Consensus 481 -------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~-~~ 552 (720)
...++|+||++ ++|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++. ++
T Consensus 82 ~~~~~~~~~~~lv~e~~~-~~L~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~ 152 (342)
T cd07854 82 VGSLTELNSVYIVQEYME-TDLANVLE-----QGPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDL 152 (342)
T ss_pred cccccccceEEEEeeccc-ccHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCc
Confidence 35789999997 58988875 35688999999999999999999999 9999999999999974 56
Q ss_pred ceEEcccCCCccCCCCCccc--cccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHH
Q 005001 553 NPHLSDCGLAALTPNTERQV--STQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVR 629 (720)
Q Consensus 553 ~~kl~Dfg~a~~~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~ 629 (720)
.++++|||++.......... .....|+..|+|||.+.+ ..++.++|||||||++|||++|+.||....+........
T Consensus 153 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~ 232 (342)
T cd07854 153 VLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLIL 232 (342)
T ss_pred eEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 78999999987653322111 122357889999998754 557889999999999999999999997665432221111
Q ss_pred hhcccccc--HHH----HHhhcc-cccCCCC-----ChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 630 WATPQLHD--IDA----LAKMVD-PALNGMY-----PAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 630 ~~~~~~~~--~~~----~~~~~~-~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
...+.... ... ...... ....... ....+.++.+++.+||+.||++||++.+++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 233 ESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred HhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 11110000 000 000000 0000000 11244678899999999999999999999965
No 376
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-34 Score=274.57 Aligned_cols=244 Identities=23% Similarity=0.283 Sum_probs=191.8
Q ss_pred ceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEee----cCeEEEEEEe
Q 005001 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAE----HGQRLLVYEY 489 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~----~~~~~lV~e~ 489 (720)
++||-|-.|.|..+.++ +|+++|+|++.+. ....+|++..=.. .|||||.++++|.. ...+.+|||.
T Consensus 68 qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~ 140 (400)
T KOG0604|consen 68 QVLGAGINGKVVQCVHKRTQEKFALKVLLDS-------PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMEC 140 (400)
T ss_pred hhhccccCCceEEEEeccchhhhHHHHHhcC-------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeec
Confidence 47999999999999665 6899999988643 2345677764443 79999999998754 4567899999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC---CCceEEcccCCCccCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD---ELNPHLSDCGLAALTP 566 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~---~~~~kl~Dfg~a~~~~ 566 (720)
|+||.|+..++. ...+.+++.++..|++||+.|+.|||+. +|.||||||+|+|... +..+||+|||+|+...
T Consensus 141 meGGeLfsriq~--~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~ 215 (400)
T KOG0604|consen 141 MEGGELFSRIQD--RGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQ 215 (400)
T ss_pred ccchHHHHHHHH--cccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEecccccccccC
Confidence 999999998873 3456799999999999999999999999 9999999999999965 4568999999998765
Q ss_pred CCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
... .....+-||.|.|||++...+|+...|+||+||++|-|++|.+||......... | +--.++..
T Consensus 216 ~~~--~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ais-------p-----gMk~rI~~ 281 (400)
T KOG0604|consen 216 EPG--DLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-------P-----GMKRRIRT 281 (400)
T ss_pred CCc--cccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCC-------h-----hHHhHhhc
Confidence 422 223457899999999999999999999999999999999999999865432110 0 01111111
Q ss_pred cccCCCCC--hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 647 PALNGMYP--AKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 647 ~~~~~~~~--~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.-+....+ ...+++..++|+.+|..+|++|.|+.+++.+
T Consensus 282 gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 282 GQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred cCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 11111111 1356678899999999999999999999876
No 377
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-34 Score=283.53 Aligned_cols=243 Identities=22% Similarity=0.333 Sum_probs=200.7
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccC-hHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV 486 (720)
.+|....+||+|+||.|.+|+.+ +.+.||||++++..+- ....+--+.|-++|+.- +-|.+++++.+|..-+.+|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 46777889999999999999766 4677999999876542 22233334566677665 568999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||+.||+|--++++ -+.+.+..+.-++..||-||-+||++ +||+||||..|||++.+|++||+|||+++..-
T Consensus 429 MEyvnGGDLMyhiQQ----~GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni 501 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQ----VGKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 501 (683)
T ss_pred EEEecCchhhhHHHH----hcccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeecccccccc
Confidence 999999999888873 46788888999999999999999999 99999999999999999999999999987432
Q ss_pred CCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
- .......++|||.|+|||++...+|+.++|+||+||+||||+.|+.||++.++.. ....+++
T Consensus 502 ~-~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~e----------------lF~aI~e 564 (683)
T KOG0696|consen 502 F-DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE----------------LFQAIME 564 (683)
T ss_pred c-CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHH----------------HHHHHHH
Confidence 2 2334456899999999999999999999999999999999999999999865432 1112221
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCCC
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRPP 678 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 678 (720)
-+..+|...+.+...+.+..+.+.|.+|..
T Consensus 565 --hnvsyPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 565 --HNVSYPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred --ccCcCcccccHHHHHHHHHHhhcCCccccC
Confidence 234578888888999999999999999953
No 378
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.3e-32 Score=316.72 Aligned_cols=147 Identities=27% Similarity=0.399 Sum_probs=131.6
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
++|.+.+.||+|+||.||+|.+. +++.||+|+++.... .......+.+|+.+++.++||||+++++++...+..|+||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57888999999999999999776 688999999975432 3334567888999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
||+.+++|.++++. .+.+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~----~~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHI----YGYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999973 35688999999999999999999998 99999999999999999999999999875
No 379
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-34 Score=286.02 Aligned_cols=264 Identities=25% Similarity=0.359 Sum_probs=205.6
Q ss_pred hcHHHHhcCCCccceeccCCCcEEEEEE-EcCCcEEEEEEccccccChHH-----HHHHHHHHHHhhcCCCCCccccceE
Q 005001 403 ASLQTATNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQE-----EDNFLEAVSNMSRLRHPNIVTLAGY 476 (720)
Q Consensus 403 ~~~~~~~~~y~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~-----~~~~~~e~~~l~~l~h~niv~l~~~ 476 (720)
.+-....++|-..++||+|||++||+|. ..+.+.||+|+-.......++ .+...+|.++.+.++||.||++|++
T Consensus 456 kDHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDy 535 (775)
T KOG1151|consen 456 KDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDY 535 (775)
T ss_pred ccCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeee
Confidence 3444556788889999999999999995 456778888876543322222 2345789999999999999999999
Q ss_pred Eee-cCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC---CC
Q 005001 477 CAE-HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD---EL 552 (720)
Q Consensus 477 ~~~-~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~---~~ 552 (720)
|.- .+..|-|+|||+|.+|+-+++ ....+++.+++.|+.||+.||.||.+. .|+|||-||||.|||+.. -|
T Consensus 536 fslDtdsFCTVLEYceGNDLDFYLK----QhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacG 610 (775)
T KOG1151|consen 536 FSLDTDSFCTVLEYCEGNDLDFYLK----QHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACG 610 (775)
T ss_pred eeeccccceeeeeecCCCchhHHHH----hhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccc
Confidence 864 567899999999999999987 457899999999999999999999997 569999999999999954 47
Q ss_pred ceEEcccCCCccCCCCCcc------ccccccccccccCccccccC----CCcccchhhhHHHHHHHHHhCCCCCCCCCCc
Q 005001 553 NPHLSDCGLAALTPNTERQ------VSTQMVGAFGYSAPEFALSG----IYTVKSDVYSFGVVMLELLTGRKPLDSSRPR 622 (720)
Q Consensus 553 ~~kl~Dfg~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwSlGv~l~elltg~~pf~~~~~~ 622 (720)
.+||+|||+++.+.++... ......||.+|++||.+.-+ +++.++||||+|||+|+.+.|+.||......
T Consensus 611 eIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ 690 (775)
T KOG1151|consen 611 EIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ 690 (775)
T ss_pred eeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH
Confidence 8999999999988765433 23456899999999998643 4789999999999999999999999754321
Q ss_pred chhhHHHhhccccccHHHHHhhcccccCCCCC--hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 623 SEQSLVRWATPQLHDIDALAKMVDPALNGMYP--AKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+.+.+..+ +-......+| +....+...+|++||++.-++|.+..++...
T Consensus 691 --QdILqeNT------------IlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d 741 (775)
T KOG1151|consen 691 --QDILQENT------------ILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD 741 (775)
T ss_pred --HHHHhhhc------------hhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence 22221110 1111122233 2355678899999999999999999888754
No 380
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1e-33 Score=281.72 Aligned_cols=271 Identities=19% Similarity=0.289 Sum_probs=201.4
Q ss_pred hhcHHHHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCC-C-CC----ccccc
Q 005001 402 VASLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-H-PN----IVTLA 474 (720)
Q Consensus 402 ~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h-~n----iv~l~ 474 (720)
+......+++|.+...+|+|.||.|-.+.+. .+..||+|+++... ...+..+-|+++++++. + |+ ++.+.
T Consensus 81 ~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~---kYreAa~iEi~vLqki~~~DP~g~~rcv~m~ 157 (415)
T KOG0671|consen 81 YQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD---KYREAALIEIEVLQKINESDPNGKFRCVQMR 157 (415)
T ss_pred EEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH---HHhhHHHHHHHHHHHHHhcCCCCceEEEeee
Confidence 3444556889999999999999999999554 57899999997532 22344456788888883 2 33 78888
Q ss_pred eEEeecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC----
Q 005001 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD---- 550 (720)
Q Consensus 475 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~---- 550 (720)
++|.-.++.+||+|.+ |-++++++.. +...+++...+..|+.|+++++++||+. +++|-||||+|||+.+
T Consensus 158 ~wFdyrghiCivfell-G~S~~dFlk~--N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~ 231 (415)
T KOG0671|consen 158 DWFDYRGHICIVFELL-GLSTFDFLKE--NNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYF 231 (415)
T ss_pred hhhhccCceEEEEecc-ChhHHHHhcc--CCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceE
Confidence 9999999999999998 5599999973 2345788999999999999999999999 9999999999999932
Q ss_pred ----------------CCceEEcccCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCC
Q 005001 551 ----------------ELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRK 614 (720)
Q Consensus 551 ----------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~ 614 (720)
+..++|+|||.|+..... ....+.|..|+|||++.+-.++.++||||+||||+|++||..
T Consensus 232 ~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~----hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~ 307 (415)
T KOG0671|consen 232 KTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH----HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGET 307 (415)
T ss_pred EEeccCCccceeccCCCcceEEEecCCcceeccC----cceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccce
Confidence 235899999999864432 245678999999999999999999999999999999999999
Q ss_pred CCCCCCCcchhhHHHhhcccccc---HHH-HHhhcccc-cC---------------CCC--------ChhHHHHHHHHHH
Q 005001 615 PLDSSRPRSEQSLVRWATPQLHD---IDA-LAKMVDPA-LN---------------GMY--------PAKSLSRFADIIA 666 (720)
Q Consensus 615 pf~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~-~~---------------~~~--------~~~~~~~l~~li~ 666 (720)
.|..-...+....-+........ ... ..+.+... +. ... ......+|.+|++
T Consensus 308 LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~ 387 (415)
T KOG0671|consen 308 LFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLR 387 (415)
T ss_pred ecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHH
Confidence 99876543322111111000000 000 01111000 00 001 1123356999999
Q ss_pred HhcCCCCCCCCCHHHHHHH
Q 005001 667 LCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 667 ~cl~~dP~~RPs~~ell~~ 685 (720)
+||..||.+|+|+.|++++
T Consensus 388 ~mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 388 RMLEFDPARRITLREALSH 406 (415)
T ss_pred HHHccCccccccHHHHhcC
Confidence 9999999999999999875
No 381
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-34 Score=291.10 Aligned_cols=247 Identities=23% Similarity=0.351 Sum_probs=202.9
Q ss_pred cceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecCCC
Q 005001 415 EFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNG 493 (720)
Q Consensus 415 ~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 493 (720)
+++||+|.||+||-|.+ ++|+.||||.+.+..+....+.++..|+.+++.+.||.||.+--.|+..+..++|||.+.|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G- 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG- 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-
Confidence 67899999999999966 4799999999999888888889999999999999999999999999999999999999976
Q ss_pred CHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCC---CceEEcccCCCccCCCCCc
Q 005001 494 NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE---LNPHLSDCGLAALTPNTER 570 (720)
Q Consensus 494 sL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~---~~~kl~Dfg~a~~~~~~~~ 570 (720)
+..+.+-. ...+++++....-++.||+.||.|||-+ +|+|+||||+|||+... -++||+|||+|+..+..
T Consensus 648 DMLEMILS--sEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk-- 720 (888)
T KOG4236|consen 648 DMLEMILS--SEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK-- 720 (888)
T ss_pred hHHHHHHH--hhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecchh--
Confidence 55454432 3468899998899999999999999999 99999999999999653 47999999999998654
Q ss_pred cccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccC
Q 005001 571 QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALN 650 (720)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (720)
......+|||.|+|||+++.+.|...-|+||+|||+|.-++|..||....... +.++ + +..+.+...
T Consensus 721 sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIn--dQIQ-------N----AaFMyPp~P 787 (888)
T KOG4236|consen 721 SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDIN--DQIQ-------N----AAFMYPPNP 787 (888)
T ss_pred hhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchh--HHhh-------c----cccccCCCc
Confidence 34566899999999999999999999999999999999999999997532211 1111 0 011111100
Q ss_pred CCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 651 GMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 651 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
=.+......+||...|+..-++|-+.+..+.+
T Consensus 788 ---W~eis~~AidlIn~LLqVkm~kRysvdk~lsh 819 (888)
T KOG4236|consen 788 ---WSEISPEAIDLINNLLQVKMRKRYSVDKSLSH 819 (888)
T ss_pred ---hhhcCHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence 02345567899999999999999998776544
No 382
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-33 Score=301.41 Aligned_cols=260 Identities=27% Similarity=0.453 Sum_probs=211.7
Q ss_pred hhcHHHHhcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEee
Q 005001 402 VASLQTATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAE 479 (720)
Q Consensus 402 ~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 479 (720)
++.+...+.-|++.++||+|.+|.||+++. ++++.+|+|+..... ....++..|.++++.. .|||++.++|+|..
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~---d~deEiE~eynil~~~~~hpnv~~fyg~~~k 87 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE---DEEEEIELEYNMLKKYSHHPNVATFYGAFIK 87 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc---cccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence 344555667789999999999999999965 468888998886543 2334455677777766 79999999999854
Q ss_pred -----cCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCce
Q 005001 480 -----HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNP 554 (720)
Q Consensus 480 -----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~ 554 (720)
.+++|||||||.+|+..|+++... +..+.|..+..|++.++.|+.+||.. .++|||||-.|||++.++.+
T Consensus 88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~V 162 (953)
T KOG0587|consen 88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEV 162 (953)
T ss_pred ecCCCCCeEEEEeeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcE
Confidence 578999999999999999998654 78899999999999999999999999 99999999999999999999
Q ss_pred EEcccCCCccCCCCCccccccccccccccCcccccc-----CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHH
Q 005001 555 HLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALS-----GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVR 629 (720)
Q Consensus 555 kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~ 629 (720)
|+.|||.+...... .......+|||.|||||++.- ..|+..+|+||||++..||.-|.+|+..+.+......+
T Consensus 163 KLvDFGvSaQldsT-~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~I- 240 (953)
T KOG0587|consen 163 KLVDFGVSAQLDST-VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI- 240 (953)
T ss_pred EEeeeeeeeeeecc-cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccC-
Confidence 99999999766543 334455789999999999964 34788999999999999999999999766543211110
Q ss_pred hhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 630 WATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
-..+......|.....++.++|..||.+|-++||++.+++++
T Consensus 241 --------------pRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 241 --------------PRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred --------------CCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 112333444577788999999999999999999999988764
No 383
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-33 Score=295.95 Aligned_cols=242 Identities=26% Similarity=0.302 Sum_probs=195.1
Q ss_pred HhcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 485 (720)
.+..|.....+|.|+|+.|-.+.+ .+++..++|++.+.... -.+|+.++... +||||+++.+.+.+..+.|+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~------~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~ 393 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADD------NQDEIPISLLVRDHPNIVKSHDVYEDGKEIYL 393 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccccc------cccccchhhhhcCCCcceeecceecCCceeee
Confidence 356788888899999999999865 46888999999765222 22445444443 79999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEe-CCCCceEEcccCCCcc
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL-DDELNPHLSDCGLAAL 564 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll-~~~~~~kl~Dfg~a~~ 564 (720)
|||.+.|+-+.+.+.. .+....++..|+.+|+.|+.|||++ |||||||||+|||+ +..++++|+|||.++.
T Consensus 394 v~e~l~g~ell~ri~~-----~~~~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~ 465 (612)
T KOG0603|consen 394 VMELLDGGELLRRIRS-----KPEFCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSE 465 (612)
T ss_pred eehhccccHHHHHHHh-----cchhHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhh
Confidence 9999999998888862 3333377888999999999999998 99999999999999 6899999999999987
Q ss_pred CCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhh
Q 005001 565 TPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKM 644 (720)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (720)
.... ....+-|..|.|||++....|++++||||||++||+|++|+.||...... .+...++
T Consensus 466 ~~~~----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~---------------~ei~~~i 526 (612)
T KOG0603|consen 466 LERS----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG---------------IEIHTRI 526 (612)
T ss_pred Cchh----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch---------------HHHHHhh
Confidence 6554 22345688899999999999999999999999999999999999764332 0111111
Q ss_pred cccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 645 VDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 645 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
. ...+....+....+|+++||+.||.+||++.++..+=
T Consensus 527 ~----~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~ 564 (612)
T KOG0603|consen 527 Q----MPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHP 564 (612)
T ss_pred c----CCccccccCHHHHHHHHHhccCChhhCcChhhhccCc
Confidence 1 1223356777889999999999999999999999773
No 384
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-33 Score=288.92 Aligned_cols=251 Identities=21% Similarity=0.301 Sum_probs=210.0
Q ss_pred cCCCccceeccCCCcEEEEEEEcCCc-EEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~~~~-~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.++..+..||-|+||.|-++..+... .+|+|.+++..+ ...+.+....|-.+|...+.|.||++|..|.++...|+.|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 44566678999999999999776444 488888875443 4555667788899999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
|-|-||.|+..++ ..+.++...+.-++..+++|++|||++ +||+|||||+|.+++.+|.+||.|||+|+....
T Consensus 500 EaClGGElWTiLr----dRg~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~ 572 (732)
T KOG0614|consen 500 EACLGGELWTILR----DRGSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS 572 (732)
T ss_pred HhhcCchhhhhhh----hcCCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhcc
Confidence 9999999999997 578899999999999999999999999 999999999999999999999999999998765
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
.. ....++|||.|.|||++.....+.++|.||||+++|||++|.+||.+.++.....++- ..
T Consensus 573 g~--KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~IL----------------kG 634 (732)
T KOG0614|consen 573 GR--KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLIL----------------KG 634 (732)
T ss_pred CC--ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHH----------------hh
Confidence 43 3456899999999999999999999999999999999999999999887754443331 11
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPP-----MSEVVQA 685 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~ell~~ 685 (720)
.-...+|........+||++....+|.+|.. ..+|-++
T Consensus 635 id~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH 677 (732)
T KOG0614|consen 635 IDKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKH 677 (732)
T ss_pred hhhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhh
Confidence 1112345566667789999999999999976 4555544
No 385
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=2.4e-32 Score=276.39 Aligned_cols=220 Identities=20% Similarity=0.222 Sum_probs=176.6
Q ss_pred CCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecCCCCHHHHh
Q 005001 421 GSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDML 499 (720)
Q Consensus 421 G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l 499 (720)
|.||.||++.+. +++.||+|++.... .+.+|...+....||||+++++++...+..++||||+++|+|.+++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 76 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHI 76 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHH
Confidence 899999999764 68899999996542 1223344444557999999999999999999999999999999998
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCcccccccccc
Q 005001 500 HFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQMVGA 579 (720)
Q Consensus 500 ~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt 579 (720)
.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.++++|||.+...... .....++
T Consensus 77 ~~----~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~ 145 (237)
T cd05576 77 SK----FLNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----CDGEAVE 145 (237)
T ss_pred HH----hcCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc----cccCCcC
Confidence 63 34689999999999999999999998 9999999999999999999999999987654332 1234567
Q ss_pred ccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCCChhHHH
Q 005001 580 FGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLS 659 (720)
Q Consensus 580 ~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (720)
..|+|||.+.+..++.++||||+|+++|||++|+.|+....... ........+...+.
T Consensus 146 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~----------------------~~~~~~~~~~~~~~ 203 (237)
T cd05576 146 NMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI----------------------NTHTTLNIPEWVSE 203 (237)
T ss_pred ccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc----------------------ccccccCCcccCCH
Confidence 78999999988889999999999999999999998875321100 00000112334556
Q ss_pred HHHHHHHHhcCCCCCCCCCHH
Q 005001 660 RFADIIALCVQPEPEFRPPMS 680 (720)
Q Consensus 660 ~l~~li~~cl~~dP~~RPs~~ 680 (720)
.+.+++.+||+.||++||++.
T Consensus 204 ~~~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 204 EARSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred HHHHHHHHHccCCHHHhcCCC
Confidence 788999999999999999973
No 386
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=8.5e-34 Score=268.85 Aligned_cols=266 Identities=24% Similarity=0.372 Sum_probs=210.7
Q ss_pred CccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec-----CeEEEE
Q 005001 413 SQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH-----GQRLLV 486 (720)
Q Consensus 413 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~lV 486 (720)
+-++.||.|+||.||.+.+. +|+.||+|++.+........+.+.+|+.++..++|.||+..+++..-. ++.|+|
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 34568999999999999664 799999999987766666778899999999999999999998876432 356889
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
+|.|.. +|...+- ..+.++...++-++.||++||.|||+. +|.||||||.|.|++.+..+||+|||+++...
T Consensus 136 TELmQS-DLHKIIV----SPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee 207 (449)
T KOG0664|consen 136 TELMQS-DLHKIIV----SPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWD 207 (449)
T ss_pred HHHHHh-hhhheec----cCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccc
Confidence 999865 8887774 578899999999999999999999999 99999999999999999999999999999877
Q ss_pred CCCccccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHH--hhccccccHHH---
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVR--WATPQLHDIDA--- 640 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~--~~~~~~~~~~~--- 640 (720)
.+....++..+-|..|+|||++++. .|+.++||||+|||+.|++..+..|....+....+++. ..+|....+..
T Consensus 208 ~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACE 287 (449)
T KOG0664|consen 208 QRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACE 287 (449)
T ss_pred hhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhh
Confidence 6666666777889999999999985 58999999999999999999999998887765544432 22333332221
Q ss_pred --HHhhcccccCCC-----C----ChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 641 --LAKMVDPALNGM-----Y----PAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 641 --~~~~~~~~~~~~-----~----~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
-..++....+.. + +.....+...+..+++..||.+|.+..+.++++
T Consensus 288 GAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 288 GAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred hhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 111121111110 0 112223566889999999999999999998875
No 387
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=2e-32 Score=250.03 Aligned_cols=210 Identities=27% Similarity=0.390 Sum_probs=177.5
Q ss_pred HHHHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhc-CCCCCccccceEEeecCe
Q 005001 405 LQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR-LRHPNIVTLAGYCAEHGQ 482 (720)
Q Consensus 405 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~ 482 (720)
++...+.......||+|+||.|-+.++. +|..+|+|++.... ..++.++++.|+.+..+ ..+|.+|.++|.....+.
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv-n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regd 119 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV-NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGD 119 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc-ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcccc
Confidence 4444555666778999999999888664 79999999997654 45667778888887555 489999999999999999
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCC
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a 562 (720)
.++.||.|+. +|..+.+..-..++.+++...-+|+..|.+||.|||++- .+||||+||+|||++.+|++|++|||++
T Consensus 120 vwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIs 196 (282)
T KOG0984|consen 120 VWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGIS 196 (282)
T ss_pred EEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccc
Confidence 9999999976 998888776677889999999999999999999999984 8999999999999999999999999999
Q ss_pred ccCCCCCccccccccccccccCcccccc----CCCcccchhhhHHHHHHHHHhCCCCCCCCC
Q 005001 563 ALTPNTERQVSTQMVGAFGYSAPEFALS----GIYTVKSDVYSFGVVMLELLTGRKPLDSSR 620 (720)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwSlGv~l~elltg~~pf~~~~ 620 (720)
..+.+... .+.-.|...|||||.+.. ..|+.++||||||++++||.+++.||+.+.
T Consensus 197 G~L~dSiA--kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~ 256 (282)
T KOG0984|consen 197 GYLVDSIA--KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWG 256 (282)
T ss_pred eeehhhhH--HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccC
Confidence 87644321 122467788999999864 368999999999999999999999998654
No 388
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.2e-32 Score=264.83 Aligned_cols=250 Identities=22% Similarity=0.365 Sum_probs=195.6
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHH-HHHHHHHhhcC-CCCCccccceEEeecCeEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDN-FLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~-~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 485 (720)
.++|+..++||+|+|+.|.+++++ +.+.||+|+++++.....+... ...|-.+..+. +||.+|-+..+|..+..+++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 467889999999999999999775 5788999999877654443322 23344455444 79999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
|.||++||+|--+++ ....++++.++-+...|.-||.|||++ |||+||||..|||+|.+|++|++|+|+.+.-
T Consensus 329 vieyv~ggdlmfhmq----rqrklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~ 401 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQ----RQRKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 401 (593)
T ss_pred EEEEecCcceeeehh----hhhcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcC
Confidence 999999999987776 346789999999999999999999999 9999999999999999999999999998765
Q ss_pred CCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhh-
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKM- 644 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 644 (720)
..+.+ ....++|||.|+|||++++..|..++|+|++||+++||+.|+.||+--.... +.....+-+-++
T Consensus 402 l~~gd-~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n---------~d~ntedylfqvi 471 (593)
T KOG0695|consen 402 LGPGD-TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDN---------PDMNTEDYLFQVI 471 (593)
T ss_pred CCCCc-ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCC---------cccchhHHHHHHH
Confidence 44433 3456899999999999999999999999999999999999999997422100 000000111111
Q ss_pred cccccCCCCChhHHHHHHHHHHHhcCCCCCCCC
Q 005001 645 VDPALNGMYPAKSLSRFADIIALCVQPEPEFRP 677 (720)
Q Consensus 645 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 677 (720)
+...+ ..|...+-....+++.-|.+||.+|.
T Consensus 472 lekqi--riprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 472 LEKQI--RIPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred hhhcc--cccceeehhhHHHHHHhhcCCcHHhc
Confidence 11111 23444444556789999999999985
No 389
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=1.1e-30 Score=264.07 Aligned_cols=237 Identities=33% Similarity=0.484 Sum_probs=193.3
Q ss_pred CCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecCCCCHHHHhh
Q 005001 422 SLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLH 500 (720)
Q Consensus 422 ~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~ 500 (720)
+||.||+|... +++.+++|++........ ...+.+|++.+++++|+||+++++++......++++||+++++|.+++.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~ 79 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLK 79 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHH
Confidence 58999999886 489999999976543221 5788899999999999999999999999999999999999999999986
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccccccccccc
Q 005001 501 FADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQMVGAF 580 (720)
Q Consensus 501 ~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~ 580 (720)
. ...+++..+..++.+++.++.|||+. +++|+||+|+||+++.++.++|+|||.+....... ......++.
T Consensus 80 ~----~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~ 150 (244)
T smart00220 80 K----RGRLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTP 150 (244)
T ss_pred h----ccCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCc
Confidence 3 22389999999999999999999999 99999999999999999999999999998765432 223456888
Q ss_pred cccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCCChh--HH
Q 005001 581 GYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAK--SL 658 (720)
Q Consensus 581 ~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 658 (720)
.|++||.+.+..++.++||||||+++|+|++|..||....... ...+............. .+
T Consensus 151 ~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~ 214 (244)
T smart00220 151 EYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLL----------------ELFKKIGKPKPPFPPPEWKIS 214 (244)
T ss_pred CCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHH----------------HHHHHHhccCCCCccccccCC
Confidence 9999999998889999999999999999999999997532111 11111111111111111 55
Q ss_pred HHHHHHHHHhcCCCCCCCCCHHHHHH
Q 005001 659 SRFADIIALCVQPEPEFRPPMSEVVQ 684 (720)
Q Consensus 659 ~~l~~li~~cl~~dP~~RPs~~ell~ 684 (720)
.++.+++.+||..+|++||++.++++
T Consensus 215 ~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 215 PEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHHHHHccCCchhccCHHHHhh
Confidence 78899999999999999999999986
No 390
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=4.4e-31 Score=296.60 Aligned_cols=265 Identities=18% Similarity=0.216 Sum_probs=171.8
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-C----CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceE------
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-N----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY------ 476 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~------ 476 (720)
..++|+..+.||+|+||.||+|.+. + +..||+|++..... ......+ .+....+.++..+...
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~----~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~ 203 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA----VEIWMNE--RVRRACPNSCADFVYGFLEPVS 203 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch----hHHHHHH--HHHhhchhhHHHHHHhhhcccc
Confidence 3567899999999999999999775 4 68999998754221 1111111 1112222233322221
Q ss_pred EeecCeEEEEEEecCCCCHHHHhhhccCC----------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEec
Q 005001 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDS----------------SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRN 540 (720)
Q Consensus 477 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~----------------~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~D 540 (720)
....+..++|+||+.+++|.++++..... ........+..++.|++.||+|||+. +|+|||
T Consensus 204 ~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRD 280 (566)
T PLN03225 204 SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRD 280 (566)
T ss_pred cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCc
Confidence 23556889999999999999998632110 00112344667999999999999999 999999
Q ss_pred CCCCCEEeCC-CCceEEcccCCCccCCCCCccccccccccccccCccccccCC----------------------Ccccc
Q 005001 541 FKSANILLDD-ELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGI----------------------YTVKS 597 (720)
Q Consensus 541 lkp~NIll~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----------------------~~~~~ 597 (720)
|||+|||++. ++.+||+|||+++..............+|+.|+|||.+.... ++.++
T Consensus 281 LKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 281 VKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred CCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 9999999986 579999999999866544444445578999999999764322 34567
Q ss_pred hhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCC----C--ChhHHHHHHHHHHHhcCC
Q 005001 598 DVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGM----Y--PAKSLSRFADIIALCVQP 671 (720)
Q Consensus 598 DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~l~~li~~cl~~ 671 (720)
|||||||++|||+++..+++... ............................ + .........+|+.+||+.
T Consensus 361 DVwSlGviL~el~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~ 436 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNLRSDSNL----IQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRF 436 (566)
T ss_pred ccHHHHHHHHHHHhCcCCCchHH----HHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccC
Confidence 99999999999999776654211 0000000000001111111111110000 0 000122355899999999
Q ss_pred CCCCCCCHHHHHHH
Q 005001 672 EPEFRPPMSEVVQA 685 (720)
Q Consensus 672 dP~~RPs~~ell~~ 685 (720)
||++|||+++++++
T Consensus 437 dP~kR~ta~e~L~H 450 (566)
T PLN03225 437 KGRQRISAKAALAH 450 (566)
T ss_pred CcccCCCHHHHhCC
Confidence 99999999999986
No 391
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=8.3e-31 Score=286.78 Aligned_cols=271 Identities=15% Similarity=0.183 Sum_probs=183.4
Q ss_pred HHhcCCCccceeccCCCcEEEEEEE-----------------cCCcEEEEEEccccccCh------------HHHHHHHH
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEF-----------------ANGKIMAVKKIDNAALSL------------QEEDNFLE 457 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~-----------------~~~~~vavK~~~~~~~~~------------~~~~~~~~ 457 (720)
...++|+..++||+|+||.||+|.. ..++.||||++....... ...+....
T Consensus 142 ~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~v 221 (507)
T PLN03224 142 WSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMV 221 (507)
T ss_pred ccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHH
Confidence 3467899999999999999999954 235679999986432110 01122334
Q ss_pred HHHHhhcCCCCCc-----cccceEEee--------cCeEEEEEEecCCCCHHHHhhhccC--------------------
Q 005001 458 AVSNMSRLRHPNI-----VTLAGYCAE--------HGQRLLVYEYVGNGNLHDMLHFADD-------------------- 504 (720)
Q Consensus 458 e~~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lV~e~~~~gsL~~~l~~~~~-------------------- 504 (720)
|+.++.+++|.++ ++++++|.. .+..++||||+++++|.++++....
T Consensus 222 E~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~ 301 (507)
T PLN03224 222 EAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNM 301 (507)
T ss_pred HHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhc
Confidence 6666777766544 677777643 3568999999999999999874211
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccccccccccccccC
Q 005001 505 SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSA 584 (720)
Q Consensus 505 ~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~a 584 (720)
....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++...............+|+.|+|
T Consensus 302 ~~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~a 378 (507)
T PLN03224 302 PQDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSP 378 (507)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeC
Confidence 112356788899999999999999999 99999999999999999999999999987543322211122345889999
Q ss_pred ccccccCCC----------------------cccchhhhHHHHHHHHHhCCC-CCCCCCCcchhhHHHhhccccccHHHH
Q 005001 585 PEFALSGIY----------------------TVKSDVYSFGVVMLELLTGRK-PLDSSRPRSEQSLVRWATPQLHDIDAL 641 (720)
Q Consensus 585 PE~~~~~~~----------------------~~~~DvwSlGv~l~elltg~~-pf~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (720)
||.+..... ..+.||||+||++|||++|.. ||......... ... . .......
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~-~~~-~---~~~~~~~ 453 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTE-LRQ-Y---DNDLNRW 453 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhH-Hhh-c---cchHHHH
Confidence 999864321 124799999999999999875 66532211000 000 0 0000001
Q ss_pred HhhcccccCCCCChhHHHHHHHHHHHhcCCCC---CCCCCHHHHHHH
Q 005001 642 AKMVDPALNGMYPAKSLSRFADIIALCVQPEP---EFRPPMSEVVQA 685 (720)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP---~~RPs~~ell~~ 685 (720)
+....................+|+.++|..+| .+|+|++|++++
T Consensus 454 r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 454 RMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred HhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 11111111111122345678899999999876 689999999875
No 392
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=2.9e-31 Score=277.13 Aligned_cols=210 Identities=22% Similarity=0.326 Sum_probs=178.1
Q ss_pred hcCCCccceeccCCCcEEEEEE-EcCCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
...|..++.||-|+||+|.++. .++...||.|.+.+..+ ..........|-++|+.-+.+-||+|+-.|.+++.+|+|
T Consensus 628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFV 707 (1034)
T KOG0608|consen 628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV 707 (1034)
T ss_pred ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEE
Confidence 3457888899999999999994 44567899999876543 444566778889999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||++||++-.+|- .-+.+.+..++-++..+..|+++.|+. |+|||||||+|||||.+|++||+|||++.-+.
T Consensus 708 MdYIPGGDmMSLLI----rmgIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfR 780 (1034)
T KOG0608|consen 708 MDYIPGGDMMSLLI----RMGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFR 780 (1034)
T ss_pred EeccCCccHHHHHH----HhccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccce
Confidence 99999999999886 257888999999999999999999999 99999999999999999999999999985221
Q ss_pred --------CCCcccc---------------------------------ccccccccccCccccccCCCcccchhhhHHHH
Q 005001 567 --------NTERQVS---------------------------------TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVV 605 (720)
Q Consensus 567 --------~~~~~~~---------------------------------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~ 605 (720)
..+++.. ...+||+.|+|||++....|+..+|+||.|||
T Consensus 781 WTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvi 860 (1034)
T KOG0608|consen 781 WTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVI 860 (1034)
T ss_pred eccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHH
Confidence 0111000 12479999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCcchh
Q 005001 606 MLELLTGRKPLDSSRPRSEQ 625 (720)
Q Consensus 606 l~elltg~~pf~~~~~~~~~ 625 (720)
||||+.|+.||....+...+
T Consensus 861 l~em~~g~~pf~~~tp~~tq 880 (1034)
T KOG0608|consen 861 LYEMLVGQPPFLADTPGETQ 880 (1034)
T ss_pred HHHHhhCCCCccCCCCCcce
Confidence 99999999999887765433
No 393
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=3.7e-31 Score=286.31 Aligned_cols=249 Identities=25% Similarity=0.383 Sum_probs=188.7
Q ss_pred cCCCccceeccCCCcE-EEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGR-VYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.-|...+++|.|+-|+ ||+|... |+.||||++-.. ......+|++.++.- +||||+++++.-.+++..||..
T Consensus 509 ~~~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e-----~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIal 582 (903)
T KOG1027|consen 509 LFFSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEE-----FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIAL 582 (903)
T ss_pred eeeccHHHcccCCCCcEEEEEeeC-CceehHHHHhhH-----hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEe
Confidence 3456677899999886 5899885 789999998532 344567899998877 7999999999988899999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC---C--CceEEcccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD---E--LNPHLSDCGLA 562 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~---~--~~~kl~Dfg~a 562 (720)
|.|.. +|.+++...............+.+..|+++||++||+. +||||||||.||||+. + ..++|+|||++
T Consensus 583 ELC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfgls 658 (903)
T KOG1027|consen 583 ELCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLS 658 (903)
T ss_pred hHhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccc
Confidence 99976 99999975311111222245677899999999999998 9999999999999976 2 46899999999
Q ss_pred ccCCCCCcccc--ccccccccccCccccccCCCcccchhhhHHHHHHHHHhC-CCCCCCCCCcchhhHHHhhccccccHH
Q 005001 563 ALTPNTERQVS--TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTG-RKPLDSSRPRSEQSLVRWATPQLHDID 639 (720)
Q Consensus 563 ~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg-~~pf~~~~~~~~~~~~~~~~~~~~~~~ 639 (720)
+.......... ....||-+|+|||++....-+.++||||+||++|+.++| .+||...-.++.. ++ ....
T Consensus 659 Kkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~N-Il-------~~~~ 730 (903)
T KOG1027|consen 659 KKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQAN-IL-------TGNY 730 (903)
T ss_pred cccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhh-hh-------cCcc
Confidence 98765443332 346799999999999999888999999999999999995 8999753221100 00 0000
Q ss_pred HHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 640 ALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.+.. ..+... .+..+||.+|+++||..||++.+|+.+
T Consensus 731 ~L~~--------L~~~~d-~eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 731 TLVH--------LEPLPD-CEAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred ceee--------eccCch-HHHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 0000 011111 167799999999999999999999854
No 394
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.5e-29 Score=256.85 Aligned_cols=136 Identities=20% Similarity=0.371 Sum_probs=112.6
Q ss_pred HHHHh-cCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCC-----C---CCccccc
Q 005001 405 LQTAT-NSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-----H---PNIVTLA 474 (720)
Q Consensus 405 ~~~~~-~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-----h---~niv~l~ 474 (720)
..... .+|.+.++||.|.|++||+|.+ .+.+.||+|+++... ...+..+.|+.+|++++ | .+||+|+
T Consensus 72 GD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq---hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~Ll 148 (590)
T KOG1290|consen 72 GDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ---HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLL 148 (590)
T ss_pred cccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh---HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeee
Confidence 34444 7899999999999999999954 567789999997543 23455678899888772 3 3699999
Q ss_pred eEEeec----CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEe
Q 005001 475 GYCAEH----GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL 548 (720)
Q Consensus 475 ~~~~~~----~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll 548 (720)
++|... .+.++|+|++ |.+|..+|.+. .-+.++...+++|++||+.||.|||..| +|||.||||+|||+
T Consensus 149 D~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s--~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 149 DHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYS--NYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred ccceecCCCCcEEEEEehhh-hhHHHHHHHHh--CCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 998653 4789999999 55899999854 3567888999999999999999999998 99999999999999
No 395
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=2.9e-30 Score=251.29 Aligned_cols=264 Identities=20% Similarity=0.278 Sum_probs=202.0
Q ss_pred hcCCCccceeccCCCcEEEEEE-EcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec------C
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH------G 481 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 481 (720)
..+|.....+|.|.- .|..|. .-.++.||+|++..........++..+|+..+..++|+||++++.+|.-. .
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 457888888999998 666663 34689999999987766666678888999999999999999999998443 3
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCC
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 561 (720)
..|+|||+|.. +|...++ -.++-.....+..|++.|++|||+. +|+||||||+||++..+..+||.|||+
T Consensus 95 e~y~v~e~m~~-nl~~vi~------~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ 164 (369)
T KOG0665|consen 95 EVYLVMELMDA-NLCQVIL------MELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGL 164 (369)
T ss_pred hHHHHHHhhhh-HHHHHHH------HhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchh
Confidence 56999999965 9999886 5567788999999999999999999 999999999999999999999999999
Q ss_pred CccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHH-H-hhcccc---c
Q 005001 562 AALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLV-R-WATPQL---H 636 (720)
Q Consensus 562 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~-~-~~~~~~---~ 636 (720)
++..... -..+.++.|..|.|||++.+..+.+.+||||+||++.||++|+.-|.+.+..+....+ + ...+.. .
T Consensus 165 ar~e~~~--~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~ 242 (369)
T KOG0665|consen 165 ARTEDTD--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMK 242 (369)
T ss_pred hcccCcc--cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHH
Confidence 9764332 3456678999999999999999999999999999999999999999865432222111 1 011110 0
Q ss_pred cHHHH----------------Hhhc-ccccCC--CCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 637 DIDAL----------------AKMV-DPALNG--MYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 637 ~~~~~----------------~~~~-~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+.... .+.+ |..... ..+........+++.+||-.||++|.++++++++
T Consensus 243 qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 243 QLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred HhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 00000 0000 000000 0011223457899999999999999999999977
No 396
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=1.7e-29 Score=234.25 Aligned_cols=260 Identities=18% Similarity=0.300 Sum_probs=195.1
Q ss_pred hcCCCccceeccCCCcEEEEEE-EcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCC-CCCccccceEEeecC--eEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHG--QRL 484 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~--~~~ 484 (720)
.++|++.+++|+|.|++||.|. ..+.++++||.++.. ..+.+.+|+.++..+. ||||+.+++...+.. ...
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV-----kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktpa 111 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV-----KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPS 111 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH-----HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCch
Confidence 4678999999999999999995 457889999999643 3667889999999995 999999999987754 568
Q ss_pred EEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCC-CceEEcccCCCc
Q 005001 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE-LNPHLSDCGLAA 563 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~-~~~kl~Dfg~a~ 563 (720)
+|+||+++.+...+. +.++...+...+.++++||.|+|++ ||+|||+||.|+|+|.. ..++|+|+|+|.
T Consensus 112 LiFE~v~n~Dfk~ly-------~tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAE 181 (338)
T KOG0668|consen 112 LIFEYVNNTDFKQLY-------PTLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAE 181 (338)
T ss_pred hHhhhhccccHHHHh-------hhhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHh
Confidence 999999987776655 5677788899999999999999999 99999999999999864 569999999998
Q ss_pred cCCCCCccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhh-HHHhhc--c------
Q 005001 564 LTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQS-LVRWAT--P------ 633 (720)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~-~~~~~~--~------ 633 (720)
++.+.... .-.+.+..|.-||.+.. ..|+.+-|+|||||++..|+..+.||........+. .+.-+. .
T Consensus 182 FYHp~~eY--nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl 259 (338)
T KOG0668|consen 182 FYHPGKEY--NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYL 259 (338)
T ss_pred hcCCCcee--eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHH
Confidence 77554322 22356778999999876 558999999999999999999999997654432221 111000 0
Q ss_pred ---ccccHHHHHhhccccc--------CCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 634 ---QLHDIDALAKMVDPAL--------NGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 634 ---~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.+.-......++.... ......-...+..+|+.+.|..|-.+|||++|.+.+
T Consensus 260 ~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 260 NKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 0000011111111100 000111123678899999999999999999999976
No 397
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=1.4e-29 Score=262.80 Aligned_cols=198 Identities=21% Similarity=0.318 Sum_probs=170.4
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHH------HHHHHHHHHhhcCC---CCCccccceEEee
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEE------DNFLEAVSNMSRLR---HPNIVTLAGYCAE 479 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~------~~~~~e~~~l~~l~---h~niv~l~~~~~~ 479 (720)
.+|...+.+|+|+||.|++|.++ +...|+||.+.+...-...+ -..--|+++|..++ |+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 35888999999999999999776 46678999987665422221 12345899999886 9999999999999
Q ss_pred cCeEEEEEEec-CCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcc
Q 005001 480 HGQRLLVYEYV-GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSD 558 (720)
Q Consensus 480 ~~~~~lV~e~~-~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~D 558 (720)
++.+||+||.. ++-+|++++. ....+++.++..|++||+.|+++||++ +|||||||-+||.++.+|-+||+|
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE----~kp~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klid 713 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIE----FKPRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLID 713 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhh----ccCccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEee
Confidence 99999999975 5669999997 468899999999999999999999999 999999999999999999999999
Q ss_pred cCCCccCCCCCccccccccccccccCccccccCCC-cccchhhhHHHHHHHHHhCCCCCC
Q 005001 559 CGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIY-TVKSDVYSFGVVMLELLTGRKPLD 617 (720)
Q Consensus 559 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~pf~ 617 (720)
||.+...... ....++||.+|.|||++.+.+| +..-|||++|+++|-++...-||.
T Consensus 714 fgsaa~~ksg---pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 714 FGSAAYTKSG---PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred ccchhhhcCC---CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9998776432 3456789999999999999998 566899999999999999888885
No 398
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.96 E-value=5.3e-30 Score=270.30 Aligned_cols=256 Identities=27% Similarity=0.381 Sum_probs=205.5
Q ss_pred HHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
....+|+...++|.|.||.||+|++. .++..|+|.++... ....+.+.+|+-+++..+||||+.++|.+...+..++
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep--~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwi 89 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEP--GDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWI 89 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeeccC--CccccccccceeeeecCCCcChHHHHhhhhhhcCcEE
Confidence 34567889999999999999999765 68899999997554 2345566788999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
+||||.+|+|.+..+ ..+++++.++..+.+..++|++|||+. +=+|||||-.||++++.|.+|++|||.+..+
T Consensus 90 cMEycgggslQdiy~----~TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqi 162 (829)
T KOG0576|consen 90 CMEYCGGGSLQDIYH----VTGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQI 162 (829)
T ss_pred EEEecCCCcccceee----ecccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhh
Confidence 999999999999876 468899999999999999999999999 8899999999999999999999999998655
Q ss_pred CCCCccccccccccccccCccccc---cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFAL---SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
.... ..+..+.||+.|||||+.. .+.|...+|||++|+...|+---+.|.....+.....+ +-
T Consensus 163 tati-~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~L-------------mT 228 (829)
T KOG0576|consen 163 TATI-AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFL-------------MT 228 (829)
T ss_pred hhhh-hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHH-------------hh
Confidence 4322 3345688999999999874 56689999999999999999887777554332211100 00
Q ss_pred hhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 643 KMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+--........+....+.+-+|++.|+.++|++||+++.++++
T Consensus 229 kS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 229 KSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred ccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheec
Confidence 0000111122334566778999999999999999999887764
No 399
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.96 E-value=4.5e-29 Score=255.94 Aligned_cols=276 Identities=22% Similarity=0.271 Sum_probs=207.9
Q ss_pred ccchhcHHHHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCC------CCCcc
Q 005001 399 SYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR------HPNIV 471 (720)
Q Consensus 399 ~~~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~niv 471 (720)
.|.+.-.+..-.+|.+....|+|-|++|.+|.+. .|..||||++.+.... .+.=+.|+++|++++ --|++
T Consensus 421 YYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M---~KtGl~EleiLkKL~~AD~Edk~Hcl 497 (752)
T KOG0670|consen 421 YYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM---HKTGLKELEILKKLNDADPEDKFHCL 497 (752)
T ss_pred eEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH---hhhhhHHHHHHHHhhccCchhhhHHH
Confidence 3566667777789999999999999999999654 5889999999865432 233467899999884 35799
Q ss_pred ccceEEeecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCC
Q 005001 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE 551 (720)
Q Consensus 472 ~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~ 551 (720)
+++..|....++|||+|.+.- +|.++++.+. .+-.+....+..++.|+.-||..|... +|+|.||||.|||+++.
T Consensus 498 rl~r~F~hknHLClVFE~Lsl-NLRevLKKyG-~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~ 572 (752)
T KOG0670|consen 498 RLFRHFKHKNHLCLVFEPLSL-NLREVLKKYG-RNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNES 572 (752)
T ss_pred HHHHHhhhcceeEEEehhhhc-hHHHHHHHhC-cccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccC
Confidence 999999999999999998854 9999998654 345678889999999999999999998 99999999999999875
Q ss_pred -CceEEcccCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHh
Q 005001 552 -LNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRW 630 (720)
Q Consensus 552 -~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~ 630 (720)
..+||||||.|....... .+.+.-+..|.|||++.|-+|+...|+||+||+||||.||+..|.+........+..-
T Consensus 573 k~iLKLCDfGSA~~~~ene---itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me 649 (752)
T KOG0670|consen 573 KNILKLCDFGSASFASENE---ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFME 649 (752)
T ss_pred cceeeeccCcccccccccc---ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHH
Confidence 467999999987654322 2234456679999999999999999999999999999999999998765433322211
Q ss_pred hcccccc---------HHH----------------------HHhhccc------ccCC--CCC---hhHHHHHHHHHHHh
Q 005001 631 ATPQLHD---------IDA----------------------LAKMVDP------ALNG--MYP---AKSLSRFADIIALC 668 (720)
Q Consensus 631 ~~~~~~~---------~~~----------------------~~~~~~~------~~~~--~~~---~~~~~~l~~li~~c 668 (720)
....+.. ... +...+.+ .+.. .++ ......|.+|+.+|
T Consensus 650 ~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkm 729 (752)
T KOG0670|consen 650 LKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKM 729 (752)
T ss_pred hcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHH
Confidence 0000000 000 0000000 0000 012 22445789999999
Q ss_pred cCCCCCCCCCHHHHHHH
Q 005001 669 VQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 669 l~~dP~~RPs~~ell~~ 685 (720)
+..||++|.+..++|++
T Consensus 730 l~LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 730 LILDPEKRITVNQALKH 746 (752)
T ss_pred hccChhhcCCHHHHhcC
Confidence 99999999999999875
No 400
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=1.8e-27 Score=234.72 Aligned_cols=212 Identities=36% Similarity=0.594 Sum_probs=183.6
Q ss_pred eccCCCcEEEEEEEcC-CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecCCCCHH
Q 005001 418 IGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLH 496 (720)
Q Consensus 418 lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 496 (720)
||+|.+|.||++...+ ++.+++|++....... ....+.+|++.++.++|++|+++++++......++++|++++++|.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 79 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLK 79 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHH
Confidence 6899999999998764 8999999997654322 3567889999999999999999999999989999999999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC-CCceEEcccCCCccCCCCCcccccc
Q 005001 497 DMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD-ELNPHLSDCGLAALTPNTERQVSTQ 575 (720)
Q Consensus 497 ~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~~~~~~~~~ 575 (720)
+++... ...+++..+..++.++++++++||+. +++|+||+|.||+++. ++.++|+|||.+........ ....
T Consensus 80 ~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~ 152 (215)
T cd00180 80 DLLKEN---EGKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKT 152 (215)
T ss_pred HHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhc
Confidence 998732 14689999999999999999999999 9999999999999999 89999999999876654321 1223
Q ss_pred ccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCCC
Q 005001 576 MVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYP 654 (720)
Q Consensus 576 ~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (720)
..+...|++||.+... .++.+.|+|++|+++++|
T Consensus 153 ~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------------------------------------- 187 (215)
T cd00180 153 IVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------------------------------------- 187 (215)
T ss_pred ccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------------------
Confidence 4578889999999887 788999999999999999
Q ss_pred hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 655 AKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 655 ~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
..+.+++.+|++.||++||++.++++.+
T Consensus 188 ----~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ----PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ----HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 3467999999999999999999998753
No 401
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.95 E-value=2.8e-28 Score=246.48 Aligned_cols=267 Identities=23% Similarity=0.360 Sum_probs=198.0
Q ss_pred HHHHhcCCCccceeccCCCcEEEEEEEc----CCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEee
Q 005001 405 LQTATNSFSQEFLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAE 479 (720)
Q Consensus 405 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 479 (720)
+....+.|..+++||+|.|++||+|.+. ..+.||+|.+.... ....+..|++++..+ .+.||+++.+++..
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts----~p~ri~~El~~L~~~gG~~ni~~~~~~~rn 106 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS----SPSRILNELEMLYRLGGSDNIIKLNGCFRN 106 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc----CchHHHHHHHHHHHhccchhhhcchhhhcc
Confidence 4556678999999999999999999554 46789999996433 356688999999988 79999999999999
Q ss_pred cCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC-CCceEEcc
Q 005001 480 HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD-ELNPHLSD 558 (720)
Q Consensus 480 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~-~~~~kl~D 558 (720)
++...+|+||++..+-.+++. .++..++..+++.++.||.++|.. |||||||||.|+|.+. .+.-.|.|
T Consensus 107 nd~v~ivlp~~~H~~f~~l~~-------~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvD 176 (418)
T KOG1167|consen 107 NDQVAIVLPYFEHDRFRDLYR-------SLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVD 176 (418)
T ss_pred CCeeEEEecccCccCHHHHHh-------cCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEe
Confidence 999999999999988888774 456888999999999999999999 9999999999999985 46789999
Q ss_pred cCCCccCCCC------------------C---------------ccc----------cccccccccccCccccccC-CCc
Q 005001 559 CGLAALTPNT------------------E---------------RQV----------STQMVGAFGYSAPEFALSG-IYT 594 (720)
Q Consensus 559 fg~a~~~~~~------------------~---------------~~~----------~~~~~gt~~y~aPE~~~~~-~~~ 594 (720)
||+|...... + ... ....+||+||+|||++.+- ..+
T Consensus 177 FgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qt 256 (418)
T KOG1167|consen 177 FGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQT 256 (418)
T ss_pred chhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcC
Confidence 9999621100 0 000 0124699999999999874 578
Q ss_pred ccchhhhHHHHHHHHHhCCCCCCCCCCcchh--hHHH-hh---------ccc----cc-----cHHHHHhhccc----cc
Q 005001 595 VKSDVYSFGVVMLELLTGRKPLDSSRPRSEQ--SLVR-WA---------TPQ----LH-----DIDALAKMVDP----AL 649 (720)
Q Consensus 595 ~~~DvwSlGv~l~elltg~~pf~~~~~~~~~--~~~~-~~---------~~~----~~-----~~~~~~~~~~~----~~ 649 (720)
+++||||.|||+.-+++++.||......... .+.. +. .+. ++ .......-... ..
T Consensus 257 taiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~ 336 (418)
T KOG1167|consen 257 TAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESI 336 (418)
T ss_pred CccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhc
Confidence 9999999999999999999999765432110 1100 00 000 00 00000000000 00
Q ss_pred -C--------CCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 650 -N--------GMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 650 -~--------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
. .......+..+++++.+|++.||.+|.++++.|++
T Consensus 337 ~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 337 YKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred ccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 0 00112234468899999999999999999999986
No 402
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=1.8e-26 Score=230.76 Aligned_cols=199 Identities=32% Similarity=0.491 Sum_probs=172.1
Q ss_pred CCccceeccCCCcEEEEEEEcC-CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEec
Q 005001 412 FSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYV 490 (720)
Q Consensus 412 y~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 490 (720)
|...+.||+|++|.||++...+ ++.+++|.+...... .....+.+|++.+++++|+|++++++++......++++|++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYC 79 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEecc
Confidence 4567789999999999998875 889999999765432 24678889999999999999999999999989999999999
Q ss_pred CCCCHHHHhhhccCCCCC-CCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 491 GNGNLHDMLHFADDSSKN-LTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~-~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
++++|.+++... .. +++..+..++.+++.++.+||+. +++|+||+|.||+++.++.++|+|||.+.......
T Consensus 80 ~~~~L~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~ 152 (225)
T smart00221 80 EGGDLFDYLRKK----GGKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDL 152 (225)
T ss_pred CCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc
Confidence 999999999732 22 88999999999999999999999 99999999999999999999999999988765432
Q ss_pred ccccccccccccccCcccc-ccCCCcccchhhhHHHHHHHHHhCCCCCCC
Q 005001 570 RQVSTQMVGAFGYSAPEFA-LSGIYTVKSDVYSFGVVMLELLTGRKPLDS 618 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlGv~l~elltg~~pf~~ 618 (720)
........++..|++||.+ ....++.++|||+||++++||++|+.||..
T Consensus 153 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 153 AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 1122345678899999998 667788899999999999999999999965
No 403
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=2.1e-27 Score=225.82 Aligned_cols=252 Identities=20% Similarity=0.323 Sum_probs=185.2
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceE-EeecCeEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGY-CAEHGQRL 484 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~-~~~~~~~~ 484 (720)
..+.|.+.+.+|+|.||.+-+++++ ..+.+++|.+.... ...++|.+|+..--.+ .|.||+.-++. |...+.++
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~---tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Yv 98 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ---TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYV 98 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch---hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEE
Confidence 3467888999999999999999886 46678999887654 3467888888753334 68999987664 77788999
Q ss_pred EEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeC--CCCceEEcccCCC
Q 005001 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD--DELNPHLSDCGLA 562 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~--~~~~~kl~Dfg~a 562 (720)
+++||++.|+|..-+. ...+-+...++++.|+++|+.|+|+. ++||||||.+||||- +..++|++|||..
T Consensus 99 F~qE~aP~gdL~snv~-----~~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t 170 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVE-----AAGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLT 170 (378)
T ss_pred EeeccCccchhhhhcC-----cccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccc
Confidence 9999999999998774 46678888999999999999999999 999999999999983 3458999999998
Q ss_pred ccCCCCCccccccccccccccCccccccC-----CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcccccc
Q 005001 563 ALTPNTERQVSTQMVGAFGYSAPEFALSG-----IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHD 637 (720)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 637 (720)
+..+.... ...-+..|.+||..... ...+.+|||.||+++|.++||..||......+ .....|.
T Consensus 171 ~k~g~tV~----~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d-~~Y~~~~------ 239 (378)
T KOG1345|consen 171 RKVGTTVK----YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMD-KPYWEWE------ 239 (378)
T ss_pred cccCceeh----hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccC-chHHHHH------
Confidence 76543221 12345679999987543 24688999999999999999999998433221 1122211
Q ss_pred HHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 005001 638 IDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQ 684 (720)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~ 684 (720)
...+...+.....+ ....+.+.++.++-+..+|++|-...++.+
T Consensus 240 --~w~~rk~~~~P~~F-~~fs~~a~r~Fkk~lt~~~~drcki~~~kk 283 (378)
T KOG1345|consen 240 --QWLKRKNPALPKKF-NPFSEKALRLFKKSLTPRFKDRCKIWTAKK 283 (378)
T ss_pred --HHhcccCccCchhh-cccCHHHHHHHHHhcCCcccccchhHHHHH
Confidence 11111111111111 123456789999999999999944444433
No 404
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.94 E-value=2.2e-27 Score=225.32 Aligned_cols=250 Identities=20% Similarity=0.379 Sum_probs=207.8
Q ss_pred CccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecCC
Q 005001 413 SQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (720)
Q Consensus 413 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 492 (720)
....+|.+...|+.|+|+++ |..+++|++............|.+|.-.++-+.||||+++++.|....+..++..||+.
T Consensus 193 nl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~ 271 (448)
T KOG0195|consen 193 NLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPF 271 (448)
T ss_pred hhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccc
Confidence 34457889999999999997 45556688876666666678899999999999999999999999999999999999999
Q ss_pred CCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEc--ccCCCccCCCCCc
Q 005001 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLS--DCGLAALTPNTER 570 (720)
Q Consensus 493 gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~--Dfg~a~~~~~~~~ 570 (720)
|+|+..++. ..+-..+..++.+++.++++|++|||+.. |-|..--|....|++|++.+++|. |--++...
T Consensus 272 gslynvlhe--~t~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarismad~kfsfqe----- 343 (448)
T KOG0195|consen 272 GSLYNVLHE--QTSVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISMADTKFSFQE----- 343 (448)
T ss_pred hHHHHHHhc--CccEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheecccceeeeec-----
Confidence 999999983 33456788999999999999999999984 234445689999999999888765 43333221
Q ss_pred cccccccccccccCccccccCCCc---ccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 571 QVSTQMVGAFGYSAPEFALSGIYT---VKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~~~~~~---~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
.+..-.|.||+||.+...+-+ .++|+|||.+++||+.|...||... ..++...++..+
T Consensus 344 ---~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadl----------------spmecgmkiale 404 (448)
T KOG0195|consen 344 ---VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADL----------------SPMECGMKIALE 404 (448)
T ss_pred ---cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccC----------------Cchhhhhhhhhc
Confidence 122346789999999887643 5799999999999999999999754 345666777778
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLV 690 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~ 690 (720)
+++...|+..+..+.+||.-|+..||.+||.++.|+-.||++.
T Consensus 405 glrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 405 GLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred cccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 8888899999999999999999999999999999999999874
No 405
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.94 E-value=3e-26 Score=278.25 Aligned_cols=218 Identities=30% Similarity=0.536 Sum_probs=145.7
Q ss_pred cCCChHHHHHHHHHHHhcCCCC-CCCCCCCCCCCCCCCCCceeEecC-CCEEEEEcCCCCCcccccccccCCCCCCEEEc
Q 005001 37 CTTDSSDVQALQVLYTSLNSPS-VLTNWKGNEGDPCGESWKGVACEG-SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDL 114 (720)
Q Consensus 37 ~~~~~~d~~al~~~~~~~~~~~-~l~~w~~~~~~~c~~~w~gv~c~~-~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L 114 (720)
+..++.|.+||++||+++.+|. .+.+|+.. .++| .|.||+|+. ++|+.|+|++|+++|.++..+..+++|++|+|
T Consensus 24 ~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~-~~~c--~w~gv~c~~~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~L 100 (968)
T PLN00113 24 SMLHAEELELLLSFKSSINDPLKYLSNWNSS-ADVC--LWQGITCNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINL 100 (968)
T ss_pred cCCCHHHHHHHHHHHHhCCCCcccCCCCCCC-CCCC--cCcceecCCCCcEEEEEecCCCccccCChHHhCCCCCCEEEC
Confidence 4447789999999999998764 67899643 4556 899999974 68999999999999988888888888888888
Q ss_pred cCCCCCCCCCCCCC---CccceeccccccCc----------------------CCCCccccccCCccEEEcccccccccc
Q 005001 115 SGNSIHDTIPYQLP---PNLTSLNLASNNFS----------------------GNLPYSIASMVSLSYLNVSRNSLTQSI 169 (720)
Q Consensus 115 ~~N~l~~~~p~~~~---~~L~~L~L~~N~l~----------------------g~~p~~~~~l~~L~~L~L~~N~l~~~~ 169 (720)
++|+++|.+|..+. ++|++|+|++|+++ +.+|..++++++|++|+|++|.+.+.+
T Consensus 101 s~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 180 (968)
T PLN00113 101 SNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKI 180 (968)
T ss_pred CCCccCCcCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccC
Confidence 88888877775442 45555555555555 445555555555555555555555555
Q ss_pred ccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEecccccccccccc--CCCCcCeEEccCccCcccCccccc---
Q 005001 170 GDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVF--SGLPLTTLNVANNHFSGWIPRELI--- 244 (720)
Q Consensus 170 p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~g~ip~~l~--- 244 (720)
|..++++++|++|+|++|++.+.+|..++++++|++|+|++|++++.+|.. ...+|+.|+|++|+++|.+|..+.
T Consensus 181 p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 260 (968)
T PLN00113 181 PNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLK 260 (968)
T ss_pred ChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCC
Confidence 555555556666666666555555555555566666666666655544421 123466666666666666665443
Q ss_pred ccceeeecCCcCC
Q 005001 245 SIRTFIYDGNSFD 257 (720)
Q Consensus 245 ~l~~l~l~~n~~~ 257 (720)
+|+.|.+.+|.+.
T Consensus 261 ~L~~L~L~~n~l~ 273 (968)
T PLN00113 261 NLQYLFLYQNKLS 273 (968)
T ss_pred CCCEEECcCCeee
Confidence 4455666666554
No 406
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.93 E-value=2.1e-26 Score=271.98 Aligned_cols=195 Identities=18% Similarity=0.248 Sum_probs=140.5
Q ss_pred cCCC-CCccccceEE-------eecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 005001 464 RLRH-PNIVTLAGYC-------AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS 535 (720)
Q Consensus 464 ~l~h-~niv~l~~~~-------~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ 535 (720)
.++| +||+++++++ ...+..+.++|++ +++|.++++. ....+++.+++.++.||++||+|||++ +
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~---g 100 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN---PDRSVDAFECFHVFRQIVEIVNAAHSQ---G 100 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc---ccccccHHHHHHHHHHHHHHHHHHHhC---C
Confidence 3445 5788888877 2334667889987 5599999962 245699999999999999999999999 9
Q ss_pred cEEecCCCCCEEeCC-------------------CCceEEcccCCCccCCCCCc---------------ccccccccccc
Q 005001 536 VVHRNFKSANILLDD-------------------ELNPHLSDCGLAALTPNTER---------------QVSTQMVGAFG 581 (720)
Q Consensus 536 iiH~Dlkp~NIll~~-------------------~~~~kl~Dfg~a~~~~~~~~---------------~~~~~~~gt~~ 581 (720)
|+||||||+|||++. ++.+|++|||+++....... .......||+.
T Consensus 101 IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 180 (793)
T PLN00181 101 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSW 180 (793)
T ss_pred eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcc
Confidence 999999999999954 44566777777654211000 00011358899
Q ss_pred ccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHh-hcccccCCCCChhHHHH
Q 005001 582 YSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAK-MVDPALNGMYPAKSLSR 660 (720)
Q Consensus 582 y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 660 (720)
|||||++.+..++.++|||||||++|||++|..|+...... . ..+.. ...+. .......
T Consensus 181 Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~-----~----------~~~~~~~~~~~-----~~~~~~~ 240 (793)
T PLN00181 181 YTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRT-----M----------SSLRHRVLPPQ-----ILLNWPK 240 (793)
T ss_pred eEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHH-----H----------HHHHHhhcChh-----hhhcCHH
Confidence 99999999999999999999999999999988886532110 0 00000 01100 0111234
Q ss_pred HHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 661 FADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 661 l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
...++.+||+.||.+||++.|++++
T Consensus 241 ~~~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 241 EASFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred HHHHHHHhCCCChhhCcChHHHhhc
Confidence 5688999999999999999999875
No 407
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.93 E-value=2.5e-25 Score=213.96 Aligned_cols=169 Identities=26% Similarity=0.293 Sum_probs=129.2
Q ss_pred CCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccc
Q 005001 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (720)
Q Consensus 493 gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 572 (720)
|+|.++++. .+..+++.++..++.|++.||+|||+. + ||+||+++.++.+|+ ||.+.......
T Consensus 1 GsL~~~l~~---~~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~--- 63 (176)
T smart00750 1 VSLADILEV---RGRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ--- 63 (176)
T ss_pred CcHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc---
Confidence 689999973 245799999999999999999999998 5 999999999999999 99987654321
Q ss_pred cccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccc-c-C
Q 005001 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPA-L-N 650 (720)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~ 650 (720)
..||+.|||||++.+..++.++|||||||++|||+||+.||......... . .......... . .
T Consensus 64 ---~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~-~-----------~~~~~~~~~~~~~~ 128 (176)
T smart00750 64 ---SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAI-L-----------EILLNGMPADDPRD 128 (176)
T ss_pred ---CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHH-H-----------HHHHHHhccCCccc
Confidence 25899999999999999999999999999999999999999654321110 0 0000000000 0 0
Q ss_pred CCCChhHHH--HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 651 GMYPAKSLS--RFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 651 ~~~~~~~~~--~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
...+..... .+.+++.+||..||++||++.|+++++..+..+.
T Consensus 129 ~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~~ 173 (176)
T smart00750 129 RSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAET 173 (176)
T ss_pred cccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHHH
Confidence 011222333 6899999999999999999999999997765443
No 408
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=3.4e-23 Score=218.59 Aligned_cols=262 Identities=20% Similarity=0.225 Sum_probs=197.6
Q ss_pred CCCccceeccCCCcEEEEEEEcCC--cEEEEEEccccccChHHHHHHHHHHHHhhcCC----CCCccccceEE-eecCeE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFANG--KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR----HPNIVTLAGYC-AEHGQR 483 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~----h~niv~l~~~~-~~~~~~ 483 (720)
+|.+.+.||+|+||.||.+..... +.+|+|.......... . .+..|..++..+. .+++..+++.+ ...+..
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~-~-~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~ 96 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP-S-VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFN 96 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC-c-cchhHHHHHHHHhhhcCCCCCCEEEEeccCCCcee
Confidence 789999999999999999987653 4778777654322211 1 4556677766665 36889999988 477789
Q ss_pred EEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCC-----CceEEcc
Q 005001 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE-----LNPHLSD 558 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~-----~~~kl~D 558 (720)
++||+.+ |.+|.++..... .+.++..++.+|+.|++.+|++||+. |++||||||.|++++.. ..+.|.|
T Consensus 97 ~iVM~l~-G~sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llD 170 (322)
T KOG1164|consen 97 FIVMSLL-GPSLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLD 170 (322)
T ss_pred EEEEecc-CccHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEe
Confidence 9999987 669999876432 57899999999999999999999999 99999999999999865 3689999
Q ss_pred cCCCc--cCCCCCcc----c---cccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHH
Q 005001 559 CGLAA--LTPNTERQ----V---STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVR 629 (720)
Q Consensus 559 fg~a~--~~~~~~~~----~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~ 629 (720)
||+++ .+...... . ...+.||..|+++....+...+.+.|+||++.++.|++.|..||............
T Consensus 171 fGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~- 249 (322)
T KOG1164|consen 171 FGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKF- 249 (322)
T ss_pred cCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHH-
Confidence 99998 33222211 1 12356999999999999999999999999999999999999999765432221111
Q ss_pred hhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 630 WATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
.+..............+..+.++...+-..+..++|....+...+.+.....
T Consensus 250 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 250 ------------EKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred ------------HHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 1111001110022334566778888888899999999999999988876665
No 409
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=1.2e-23 Score=197.08 Aligned_cols=258 Identities=20% Similarity=0.259 Sum_probs=203.1
Q ss_pred hcCCCccceeccCCCcEEEEEE-EcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCC-CCccccceEEeecCeEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH-PNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lV 486 (720)
.+.|..+++||.|+||.+|.|. ..+|+.||||.-...... .++..|..+.+.+++ ..|..+..+..+...-.+|
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h----pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlV 89 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH----PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLV 89 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC----cchhHHHHHHHHhccCCCCchhhhhccccccceee
Confidence 4678999999999999999995 467999999988655433 346677888888765 7788888888899999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCC---CceEEcccCCCc
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE---LNPHLSDCGLAA 563 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~---~~~kl~Dfg~a~ 563 (720)
||.+ |.+|.++..++ ...++..+++-++-|++.-++|+|.+ ++|||||||+|+|..-+ ..+.++|||+|+
T Consensus 90 MdLL-GPsLEdLfnfC---~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK 162 (341)
T KOG1163|consen 90 MDLL-GPSLEDLFNFC---SRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK 162 (341)
T ss_pred eecc-CccHHHHHHHH---hhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchh
Confidence 9998 56999999875 47889999999999999999999999 99999999999999754 468999999998
Q ss_pred cCCCCCccc------cccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcccccc
Q 005001 564 LTPNTERQV------STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHD 637 (720)
Q Consensus 564 ~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 637 (720)
.+.+..... .....||.+|.+-....+...+.+.|+-|+|.++.++--|..||.+..........
T Consensus 163 ky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKy--------- 233 (341)
T KOG1163|consen 163 KYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKY--------- 233 (341)
T ss_pred hhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHH---------
Confidence 765433221 23467999999988888888899999999999999999999999987654333222
Q ss_pred HHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 005001 638 IDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALV 687 (720)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~ 687 (720)
+.+.+..............|.++.-.+..|-..--++.|+..-+-+.+.
T Consensus 234 -EkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFr 282 (341)
T KOG1163|consen 234 -EKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFR 282 (341)
T ss_pred -HHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHH
Confidence 1222211111111223456778889999999999999999877666553
No 410
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=6.8e-23 Score=200.53 Aligned_cols=277 Identities=16% Similarity=0.230 Sum_probs=215.2
Q ss_pred cCCCccceeccCCCcEEEEEE-EcCCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 487 (720)
-.|++.++||+|.||+++.|+ +-+++.||||.-.... +..++..|.+..+.+ ..++|...+-+..+..+-.||+
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS----~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi 103 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS----EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI 103 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC----CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence 368889999999999999995 4589999999764332 345567777777777 5799999998888888889999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCC-----ceEEcccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL-----NPHLSDCGLA 562 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~-----~~kl~Dfg~a 562 (720)
|.+ |.+|.|+...+ +..++..++.-+|.|++.-++|+|++ .+|.|||||+|+||...+ .+.|+|||+|
T Consensus 104 dLL-GPSLEDLFD~C---gR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmA 176 (449)
T KOG1165|consen 104 DLL-GPSLEDLFDLC---GRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMA 176 (449)
T ss_pred hhh-CcCHHHHHHHh---cCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccch
Confidence 998 56999998764 57899999999999999999999999 999999999999997543 5899999999
Q ss_pred ccCCCCCccc------cccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccc
Q 005001 563 ALTPNTERQV------STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLH 636 (720)
Q Consensus 563 ~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 636 (720)
+.+.+..... .....||.+||+-....+...+.+.|+-|||-++.+++-|..||.+..........
T Consensus 177 K~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kY-------- 248 (449)
T KOG1165|consen 177 KEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKY-------- 248 (449)
T ss_pred hhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHH--------
Confidence 8776554322 23457999999999999999999999999999999999999999876543222111
Q ss_pred cHHHHHhhcccccC---CCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhcc------ccccCCCCCCCc
Q 005001 637 DIDALAKMVDPALN---GMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV------VKRRSSDESGFS 707 (720)
Q Consensus 637 ~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~~------~~~~~~~~~~~~ 707 (720)
.++-+.+-. .......+.++...++..-..+-.+-|+.+-+...+.+++++... .+....+..+|.
T Consensus 249 -----eKIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~g~t~Dg~yDW~~ln~g~gw~ 323 (449)
T KOG1165|consen 249 -----EKIGETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRLGETDDGEYDWMGLNNGKGWP 323 (449)
T ss_pred -----HHhccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhcCCcccccccccccCCCCCCc
Confidence 111111100 011234677888899999999999999999999888888876543 333344445565
Q ss_pred ccC
Q 005001 708 YRT 710 (720)
Q Consensus 708 ~~~ 710 (720)
..+
T Consensus 324 ~~~ 326 (449)
T KOG1165|consen 324 SGS 326 (449)
T ss_pred ccc
Confidence 443
No 411
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.90 E-value=3.6e-23 Score=217.40 Aligned_cols=169 Identities=17% Similarity=0.162 Sum_probs=130.7
Q ss_pred HHHhcCCCccceeccCCCcEEEEEEEc--CCcEEEEEEcccccc---ChHHHHHHHHHHHHhhcCCCCCccccceEEeec
Q 005001 406 QTATNSFSQEFLIGEGSLGRVYRAEFA--NGKIMAVKKIDNAAL---SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH 480 (720)
Q Consensus 406 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 480 (720)
......|...+.||+|+||+||+|.+. +++.||||++..... .......+.+|++++++++|+|+++.+.. .
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~ 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---T 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---c
Confidence 344567999999999999999999765 577889998753311 23345678999999999999999853322 2
Q ss_pred CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecC-CCCCEEeCCCCceEEccc
Q 005001 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNF-KSANILLDDELNPHLSDC 559 (720)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dl-kp~NIll~~~~~~kl~Df 559 (720)
+..++||||++|++|.. +. ... ...++.|+++||+|||+. +|+|||| ||+|||++.++.+||+||
T Consensus 91 ~~~~LVmE~~~G~~L~~-~~----~~~------~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDF 156 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHL-AR----PHG------DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDF 156 (365)
T ss_pred CCcEEEEEccCCCCHHH-hC----ccc------hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEEC
Confidence 46899999999999963 21 111 146788999999999999 9999999 999999999999999999
Q ss_pred CCCccCCCCCcccc-------ccccccccccCccccccC
Q 005001 560 GLAALTPNTERQVS-------TQMVGAFGYSAPEFALSG 591 (720)
Q Consensus 560 g~a~~~~~~~~~~~-------~~~~gt~~y~aPE~~~~~ 591 (720)
|+++.......... ....+++.|+|||.+...
T Consensus 157 GlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 157 QLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred ccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 99986654331111 345688899999998653
No 412
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.89 E-value=9.2e-24 Score=236.46 Aligned_cols=255 Identities=22% Similarity=0.256 Sum_probs=189.4
Q ss_pred CccceeccCCCcEEEEEEEc-CCcEEEEEEcc----ccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 413 SQEFLIGEGSLGRVYRAEFA-NGKIMAVKKID----NAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 413 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~----~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
....++|.|++|.|+.+... ..+..+.|.+. ...........+..|+.+-..+.|||++..+..+.+.....-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 45668999999988877443 34444444433 11111222223667888888999999998888877777666679
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
|||++ +|..++. ....+...++-.+++|++.|++|+|+. ||.|||+|++|+++..+|.+||+|||.+..+.-
T Consensus 401 E~~~~-Dlf~~~~----~~~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~ 472 (601)
T KOG0590|consen 401 EYCPY-DLFSLVM----SNGKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRY 472 (601)
T ss_pred hcccH-HHHHHHh----cccccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeecc
Confidence 99999 9999986 235788999999999999999999999 999999999999999999999999999876543
Q ss_pred CCc---cccccccccccccCccccccCCCccc-chhhhHHHHHHHHHhCCCCCCCCCCcchhh-HHHhhccccccHHHHH
Q 005001 568 TER---QVSTQMVGAFGYSAPEFALSGIYTVK-SDVYSFGVVMLELLTGRKPLDSSRPRSEQS-LVRWATPQLHDIDALA 642 (720)
Q Consensus 568 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwSlGv~l~elltg~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~ 642 (720)
... ......+|+..|+|||++.+..|++. .||||.|+++..|.+|+.||......+... ...+.. .........
T Consensus 473 ~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~-~~~~~~~~~ 551 (601)
T KOG0590|consen 473 PWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSD-QRNIFEGPN 551 (601)
T ss_pred CcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhcccc-ccccccChH
Confidence 332 44566789999999999999999764 899999999999999999998765443221 000000 000000000
Q ss_pred hhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 643 KMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
..-...+..-+.+|.+||+.||.+|-++++|++.
T Consensus 552 ---------~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 552 ---------RLLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred ---------HHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 0112345567789999999999999999999864
No 413
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.88 E-value=1.7e-23 Score=232.57 Aligned_cols=247 Identities=25% Similarity=0.288 Sum_probs=187.4
Q ss_pred CCCccceeccCCCcEEEEEEEcCCcEEEEEEccccc--cChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAA--LSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
+|..++.||++.|=+|.+|++++|. |+||++-+.. .+.....+-++|++ ...++|||++++.-....+...|+|-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 5667788999999999999999888 7788875433 34444455555666 666799999999888888888899999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC--C
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT--P 566 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~--~ 566 (720)
|+.. +|+|.+. .+.-+...+.+.|+.|++.||..+|+. +|+|||||.+|||++.-..+.|+||..-+.. +
T Consensus 102 yvkh-nLyDRlS----TRPFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLP 173 (1431)
T KOG1240|consen 102 YVKH-NLYDRLS----TRPFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLP 173 (1431)
T ss_pred HHhh-hhhhhhc----cchHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCC
Confidence 9976 9999986 456678889999999999999999999 9999999999999999999999999876532 2
Q ss_pred CCCcccccccccc----ccccCccccccCC-----------CcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHh
Q 005001 567 NTERQVSTQMVGA----FGYSAPEFALSGI-----------YTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRW 630 (720)
Q Consensus 567 ~~~~~~~~~~~gt----~~y~aPE~~~~~~-----------~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~ 630 (720)
.++.....-+..| .+|+|||.+.... .+++.||||+||++.||++ |++||.- .++..|
T Consensus 174 eDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L------SQL~aY 247 (1431)
T KOG1240|consen 174 EDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL------SQLLAY 247 (1431)
T ss_pred CCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH------HHHHhH
Confidence 2222222222222 3699999885421 5678999999999999999 7888853 223333
Q ss_pred hccc-cccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 631 ATPQ-LHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 631 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.... ......++++-|. .+++++..|++.||++|.++++.++.
T Consensus 248 r~~~~~~~e~~Le~Ied~------------~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 248 RSGNADDPEQLLEKIEDV------------SLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred hccCccCHHHHHHhCcCc------------cHHHHHHHHHccCchhccCHHHHHHh
Confidence 3321 1112223333222 46799999999999999999999987
No 414
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.88 E-value=2.2e-21 Score=205.37 Aligned_cols=258 Identities=30% Similarity=0.480 Sum_probs=199.8
Q ss_pred CCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChH-HHHHHHHHHHHhhcCCCC-CccccceEEeecCeEEEEEEe
Q 005001 412 FSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQ-EEDNFLEAVSNMSRLRHP-NIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 412 y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~h~-niv~l~~~~~~~~~~~lV~e~ 489 (720)
|.....||.|+||.||++... ..+++|.+........ ....+.+|...++.+.|+ +++++.+.+......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 566788999999999999876 8889999976655443 577889999999999988 799999999777778999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCC-ceEEcccCCCccCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL-NPHLSDCGLAALTPNT 568 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~~~~ 568 (720)
+.++++.+++...... ..+.......++.|++.++.|+|+. +++|||+||+||+++..+ .++++|||.+......
T Consensus 80 ~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 80 VDGGSLEDLLKKIGRK-GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred CCCCcHHHHHHhcccc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence 9999999777521111 3789999999999999999999999 999999999999999998 7999999999755443
Q ss_pred Ccc-----ccccccccccccCcccccc---CCCcccchhhhHHHHHHHHHhCCCCCCCCCCc-chhhHHHhhccccccHH
Q 005001 569 ERQ-----VSTQMVGAFGYSAPEFALS---GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPR-SEQSLVRWATPQLHDID 639 (720)
Q Consensus 569 ~~~-----~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~-~~~~~~~~~~~~~~~~~ 639 (720)
... ......||..|+|||.+.+ ..++...|+||+|++++++++|..||...... .......
T Consensus 156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~---------- 225 (384)
T COG0515 156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLK---------- 225 (384)
T ss_pred CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHH----------
Confidence 322 2355689999999999988 57889999999999999999999997655431 0000000
Q ss_pred HHHhhcccccCCCCC----hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 640 ALAKMVDPALNGMYP----AKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 640 ~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.+.....+....... ......+.+++..|+..+|..|.+..+....
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 226 IILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred HHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 000000000000111 1223567899999999999999999988765
No 415
>PLN03150 hypothetical protein; Provisional
Probab=99.84 E-value=1.9e-20 Score=213.21 Aligned_cols=139 Identities=35% Similarity=0.547 Sum_probs=85.3
Q ss_pred cCCChHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCceeEecCC------CEEEEEcCCCCCcccccccccCCCCCC
Q 005001 37 CTTDSSDVQALQVLYTSLNSPSVLTNWKGNEGDPCGESWKGVACEGS------AVVSIDISGLGLSGTMGYLLSDLLSLR 110 (720)
Q Consensus 37 ~~~~~~d~~al~~~~~~~~~~~~l~~w~~~~~~~c~~~w~gv~c~~~------~v~~l~l~~~~l~g~~~~~l~~l~~L~ 110 (720)
..+...|.+||+++|+++.++.. .+|.++.+.|+.+.|.||.|+.. .|+.|+|++|++.|.+|..+++|++|+
T Consensus 367 ~~t~~~~~~aL~~~k~~~~~~~~-~~W~g~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~~L~ 445 (623)
T PLN03150 367 SKTLLEEVSALQTLKSSLGLPLR-FGWNGDPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHLQ 445 (623)
T ss_pred cccCchHHHHHHHHHHhcCCccc-CCCCCCCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCCCCC
Confidence 45567899999999999976543 48975432222347999999621 255566666666665555555555555
Q ss_pred EEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEccccccccccccccCCCCCCCeeecCCCccc
Q 005001 111 KFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFS 190 (720)
Q Consensus 111 ~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 190 (720)
.|+|++|+|+ |.+|..++++++|+.|+|++|+|+|.+|+.+++|++|+.|+|++|+|+
T Consensus 446 ~L~Ls~N~l~----------------------g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~ 503 (623)
T PLN03150 446 SINLSGNSIR----------------------GNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLS 503 (623)
T ss_pred EEECCCCccc----------------------CcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCccc
Confidence 5554444443 344555555556666666666666666666666666666666666666
Q ss_pred CCCCcccc
Q 005001 191 GDLPNSFI 198 (720)
Q Consensus 191 g~~p~~~~ 198 (720)
|.+|..++
T Consensus 504 g~iP~~l~ 511 (623)
T PLN03150 504 GRVPAALG 511 (623)
T ss_pred ccCChHHh
Confidence 66655543
No 416
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.84 E-value=8.1e-21 Score=183.71 Aligned_cols=142 Identities=19% Similarity=0.229 Sum_probs=110.2
Q ss_pred cceeccCCCcEEEEEEEcCCcEEEEEEccccccChHH------------------------HHHHHHHHHHhhcCCCCCc
Q 005001 415 EFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQE------------------------EDNFLEAVSNMSRLRHPNI 470 (720)
Q Consensus 415 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~------------------------~~~~~~e~~~l~~l~h~ni 470 (720)
...||+|+||.||+|...+|+.||+|+++........ ......|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4579999999999998888999999999754321111 1122358889999988887
Q ss_pred cccceEEeecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHH-HhcCCCCcEEecCCCCCEEeC
Q 005001 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL-HEVCLPSVVHRNFKSANILLD 549 (720)
Q Consensus 471 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~L-H~~~~~~iiH~Dlkp~NIll~ 549 (720)
.....+.. ...++||||++++++..... ....++...+..++.|++.+|.|+ |+. +|+||||||+|||++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~----~~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~ 152 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRL----KDAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH 152 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhh----hcCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE
Confidence 54443322 23489999999887765432 235788999999999999999999 687 999999999999998
Q ss_pred CCCceEEcccCCCccCC
Q 005001 550 DELNPHLSDCGLAALTP 566 (720)
Q Consensus 550 ~~~~~kl~Dfg~a~~~~ 566 (720)
++.++|+|||+|....
T Consensus 153 -~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 153 -DGKLYIIDVSQSVEHD 168 (190)
T ss_pred -CCcEEEEEccccccCC
Confidence 4789999999987543
No 417
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.83 E-value=8.9e-21 Score=185.17 Aligned_cols=174 Identities=13% Similarity=0.166 Sum_probs=135.3
Q ss_pred HHhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHH-HHH------HHHHHHHhhcCCCCCccccceEEee
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQE-EDN------FLEAVSNMSRLRHPNIVTLAGYCAE 479 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~-~~~------~~~e~~~l~~l~h~niv~l~~~~~~ 479 (720)
...++|+..+++|.|+||.||++.. ++..+|+|.+.......+. ... +.+|++.+.++.|++|..+.+++..
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 3468899999999999999999866 5778999999765433222 122 5789999999999999999988654
Q ss_pred c--------CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCC
Q 005001 480 H--------GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE 551 (720)
Q Consensus 480 ~--------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~ 551 (720)
. +..++||||++|.+|.++.. ++. ....+++.++..+|+. +++|||++|+||+++.+
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~--------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~ 171 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPE--------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKN 171 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhh--------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCC
Confidence 3 35789999999999988642 222 2456899999999999 99999999999999998
Q ss_pred CceEEcccCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHH
Q 005001 552 LNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELL 610 (720)
Q Consensus 552 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ell 610 (720)
| ++|+|||.......... . ..++....|..++|+|+||+++..+.
T Consensus 172 g-i~liDfg~~~~~~e~~a--~-----------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 172 G-LRIIDLSGKRCTAQRKA--K-----------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred C-EEEEECCCcccccchhh--H-----------HHHHHHhHhcccccccceeEeehHHH
Confidence 8 99999998865532111 0 01344555778999999999987654
No 418
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.83 E-value=9.3e-22 Score=209.36 Aligned_cols=227 Identities=24% Similarity=0.357 Sum_probs=182.9
Q ss_pred eeccCCCcEEEEEE----EcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCC-CCCccccceEEeecCeEEEEEEecC
Q 005001 417 LIGEGSLGRVYRAE----FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHGQRLLVYEYVG 491 (720)
Q Consensus 417 ~lG~G~fg~Vy~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~~ 491 (720)
.+|+|+||.|+++. .+.|.-+|.|..++.............|..++...+ ||.++++...+..+...++++++..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 37999999999873 335777888888765543333334455667777775 9999999999999999999999999
Q ss_pred CCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCcc
Q 005001 492 NGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571 (720)
Q Consensus 492 ~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 571 (720)
+|+|...+. ....+.+.....+...++-+++++|+. +|+|||+|++||+++.+|++++.|||+++..-....
T Consensus 81 gg~lft~l~----~~~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~- 152 (612)
T KOG0603|consen 81 GGDLFTRLS----KEVMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI- 152 (612)
T ss_pred cchhhhccc----cCCchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhh-
Confidence 999998876 356677777888888899999999999 999999999999999999999999999976533221
Q ss_pred ccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCC
Q 005001 572 VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNG 651 (720)
Q Consensus 572 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (720)
.+||..|||||++. ....++|.||||++++||+||..||.. +.+..+.. ...
T Consensus 153 ----~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~--------------------~~~~~Il~--~~~ 204 (612)
T KOG0603|consen 153 ----ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG--------------------DTMKRILK--AEL 204 (612)
T ss_pred ----cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch--------------------HHHHHHhh--hcc
Confidence 28999999999998 557889999999999999999999975 11112211 123
Q ss_pred CCChhHHHHHHHHHHHhcCCCCCCCCCH
Q 005001 652 MYPAKSLSRFADIIALCVQPEPEFRPPM 679 (720)
Q Consensus 652 ~~~~~~~~~l~~li~~cl~~dP~~RPs~ 679 (720)
..|........+++..++..+|..|.-.
T Consensus 205 ~~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 205 EMPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred CCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 4577788888999999999999999655
No 419
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.82 E-value=2.3e-19 Score=171.28 Aligned_cols=188 Identities=15% Similarity=0.124 Sum_probs=141.0
Q ss_pred ccceeccCCCcEEEEEEEcCCcEEEEEEccccccChH--HHHHHHHHHHHhhcCC-CCCccccceEEeecCeEEEEEEec
Q 005001 414 QEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQ--EEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHGQRLLVYEYV 490 (720)
Q Consensus 414 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~--~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~ 490 (720)
....|++|+||+||.+.. .+.+++.+.+........ ....+.+|+++++++. |++|++++++ +..+++|||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 456899999999998866 677888777764432111 1235789999999995 5889999886 3469999999
Q ss_pred CCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecC-CCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNF-KSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dl-kp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
.|.+|...+. .. ...++.|++.+|.++|+. ||+|||| ||+|||++.++.++|+|||++.......
T Consensus 81 ~G~~L~~~~~-----~~------~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 81 AGAAMYQRPP-----RG------DLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred cCccHHhhhh-----hh------hHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 9999875432 11 134678999999999999 9999999 7999999999999999999998655433
Q ss_pred cc----c--------cccccccccccCccccccC-CCc-ccchhhhHHHHHHHHHhCCCCCCCCC
Q 005001 570 RQ----V--------STQMVGAFGYSAPEFALSG-IYT-VKSDVYSFGVVMLELLTGRKPLDSSR 620 (720)
Q Consensus 570 ~~----~--------~~~~~gt~~y~aPE~~~~~-~~~-~~~DvwSlGv~l~elltg~~pf~~~~ 620 (720)
.. . ......++.|+.|+...-- ..+ ...+.++-|+-+|.++|++.+.....
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 10 0 0012367778888755432 223 56799999999999999999876544
No 420
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.81 E-value=1.4e-19 Score=175.74 Aligned_cols=142 Identities=20% Similarity=0.241 Sum_probs=112.1
Q ss_pred cceeccCCCcEEEEEEEcCCcEEEEEEccccccChH------------------------HHHHHHHHHHHhhcCCCCCc
Q 005001 415 EFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQ------------------------EEDNFLEAVSNMSRLRHPNI 470 (720)
Q Consensus 415 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~------------------------~~~~~~~e~~~l~~l~h~ni 470 (720)
...||+|+||.||+|.+.+|+.||||++........ ....+.+|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 457999999999999887899999999875421100 01223578888999999988
Q ss_pred cccceEEeecCeEEEEEEecCCCCHHHH-hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEEecCCCCCEEe
Q 005001 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDM-LHFADDSSKNLTWNARVRVALGTARALEYLHE-VCLPSVVHRNFKSANILL 548 (720)
Q Consensus 471 v~l~~~~~~~~~~~lV~e~~~~gsL~~~-l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~-~~~~~iiH~Dlkp~NIll 548 (720)
.....+... ..++||||++++++... +. ...++..++..++.|++.++.++|+ . +|+||||||+||++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll 151 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLK-----DVPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILY 151 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhh-----hccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEE
Confidence 655554433 24899999998865433 32 3467788999999999999999999 8 99999999999999
Q ss_pred CCCCceEEcccCCCccCCC
Q 005001 549 DDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 549 ~~~~~~kl~Dfg~a~~~~~ 567 (720)
+ ++.++|+|||++.....
T Consensus 152 ~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 152 H-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred E-CCCEEEEEcccceecCC
Confidence 9 78999999999986644
No 421
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.81 E-value=9.4e-20 Score=183.35 Aligned_cols=235 Identities=21% Similarity=0.301 Sum_probs=151.9
Q ss_pred CCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCC----------CCccccceEEe-
Q 005001 412 FSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRH----------PNIVTLAGYCA- 478 (720)
Q Consensus 412 y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h----------~niv~l~~~~~- 478 (720)
+...+.||.|+++.||.+.+. +|+.+|+|.+..... .....+.+.+|......+.+ -.++-.++...
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 345678999999999999876 589999999864432 23356677777655554322 12222222221
Q ss_pred --------ec---C-----eEEEEEEecCCCCHHHHhhhccCCC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEe
Q 005001 479 --------EH---G-----QRLLVYEYVGNGNLHDMLHFADDSS---KNLTWNARVRVALGTARALEYLHEVCLPSVVHR 539 (720)
Q Consensus 479 --------~~---~-----~~~lV~e~~~~gsL~~~l~~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~ 539 (720)
.. . ..+++|+-+. +||.+++....... ..+....+..+..|+++.+++||+. |++|+
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHg 169 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHG 169 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEES
T ss_pred cCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEec
Confidence 11 1 2367888885 59988876422222 2244556677779999999999999 99999
Q ss_pred cCCCCCEEeCCCCceEEcccCCCccCCCCCccccccccccccccCccccccC--------CCcccchhhhHHHHHHHHHh
Q 005001 540 NFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSG--------IYTVKSDVYSFGVVMLELLT 611 (720)
Q Consensus 540 Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--------~~~~~~DvwSlGv~l~ellt 611 (720)
||+|+|++++.+|.++|+||+.....+.... . ...+..|.+||..... .++.+.|.|++|+++|.|.+
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~~~---~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC 245 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGTRYR---C-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWC 245 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTEEEE---G-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHH
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCceee---c-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHH
Confidence 9999999999999999999998765433211 1 2345789999977542 47889999999999999999
Q ss_pred CCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCC
Q 005001 612 GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFR 676 (720)
Q Consensus 612 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 676 (720)
|..||....+...... .+. .+. +.++.+.+||+.+|+.||++|
T Consensus 246 ~~lPf~~~~~~~~~~~--------------------~f~-~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 246 GRLPFGLSSPEADPEW--------------------DFS-RCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp SS-STCCCGGGSTSGG--------------------GGT-TSS----HHHHHHHHHHT-SSGGGS
T ss_pred ccCCCCCCCccccccc--------------------cch-hcC-CcCHHHHHHHHHHccCCcccC
Confidence 9999986543211110 111 223 778899999999999999988
No 422
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.79 E-value=2.7e-19 Score=179.22 Aligned_cols=195 Identities=19% Similarity=0.259 Sum_probs=140.9
Q ss_pred CCCCccccceEEee---------------------------cCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHH
Q 005001 466 RHPNIVTLAGYCAE---------------------------HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVA 518 (720)
Q Consensus 466 ~h~niv~l~~~~~~---------------------------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~ 518 (720)
+|||||++.++|.+ ...+|+||..++. +|+.++. .+..+...+.-++
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~-----~~~~s~r~~~~~l 347 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLW-----TRHRSYRTGRVIL 347 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHh-----cCCCchHHHHHHH
Confidence 69999999988743 1245899998876 9999996 4566777788899
Q ss_pred HHHHHHHHHHHhcCCCCcEEecCCCCCEEeC--CCC--ceEEcccCCCccCCCCC-----ccccccccccccccCccccc
Q 005001 519 LGTARALEYLHEVCLPSVVHRNFKSANILLD--DEL--NPHLSDCGLAALTPNTE-----RQVSTQMVGAFGYSAPEFAL 589 (720)
Q Consensus 519 ~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~--~~~--~~kl~Dfg~a~~~~~~~-----~~~~~~~~gt~~y~aPE~~~ 589 (720)
.|+++|+.|||++ ||.|||+|.+|||+. +|+ .+.|+|||++---.... ........|.-..||||+..
T Consensus 348 aQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~t 424 (598)
T KOG4158|consen 348 AQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIAT 424 (598)
T ss_pred HHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhh
Confidence 9999999999999 999999999999983 333 46899999864322110 01112235777899999987
Q ss_pred cCC------CcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHH
Q 005001 590 SGI------YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFAD 663 (720)
Q Consensus 590 ~~~------~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 663 (720)
..+ --.++|.|+.|-+.||+++..-||.......... ..| .+ .-....|..++..+.+
T Consensus 425 a~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~-r~Y-----------qe----~qLPalp~~vpp~~rq 488 (598)
T KOG4158|consen 425 AVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDT-RTY-----------QE----SQLPALPSRVPPVARQ 488 (598)
T ss_pred cCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheech-hhh-----------hh----hhCCCCcccCChHHHH
Confidence 543 1358999999999999999999998633221110 001 01 1112235667778899
Q ss_pred HHHHhcCCCCCCCCCHHHHHHH
Q 005001 664 IIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 664 li~~cl~~dP~~RPs~~ell~~ 685 (720)
++...|+.||.+|++..-....
T Consensus 489 lV~~lL~r~pskRvsp~iAANv 510 (598)
T KOG4158|consen 489 LVFDLLKRDPSKRVSPNIAANV 510 (598)
T ss_pred HHHHHhcCCccccCCccHHHhH
Confidence 9999999999999987554443
No 423
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.77 E-value=1.2e-18 Score=186.20 Aligned_cols=216 Identities=24% Similarity=0.407 Sum_probs=163.4
Q ss_pred hhcCCCCCccccceEEeecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCc-EEec
Q 005001 462 MSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV-VHRN 540 (720)
Q Consensus 462 l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~i-iH~D 540 (720)
|+.+.|.|+.+++|.+.+....++|.+||..|+|.|.+.. ....+++.-...++++++.||+|||.. .| .|+.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~---~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~ 74 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN---EDIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGA 74 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc---cccCccHHHHHHHHHHHHHHHHHHhcC---cceeeee
Confidence 3567899999999999999999999999999999999973 457789999999999999999999988 55 9999
Q ss_pred CCCCCEEeCCCCceEEcccCCCccCCCCCc-cccccccccccccCccccccCC-------CcccchhhhHHHHHHHHHhC
Q 005001 541 FKSANILLDDELNPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGI-------YTVKSDVYSFGVVMLELLTG 612 (720)
Q Consensus 541 lkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~-------~~~~~DvwSlGv~l~elltg 612 (720)
+++.|++++..+.+||+|||+......... .......-..-|.|||.+.... .+.+.||||||++++|+++.
T Consensus 75 l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r 154 (484)
T KOG1023|consen 75 LKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFR 154 (484)
T ss_pred eccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhc
Confidence 999999999999999999999876643111 1111112334699999998642 36679999999999999999
Q ss_pred CCCCCCCCCcch-hhHHHhhccccccHHHHHhhcccccCCCCC-h-hHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 005001 613 RKPLDSSRPRSE-QSLVRWATPQLHDIDALAKMVDPALNGMYP-A-KSLSRFADIIALCVQPEPEFRPPMSEVVQALVRL 689 (720)
Q Consensus 613 ~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~ 689 (720)
..||+....... ..++... .+.-....+.... . +...++..++..||..+|++||+++++-..++.+
T Consensus 155 ~~~~~~~~~~~~~~eii~~~----------~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~ 224 (484)
T KOG1023|consen 155 SGPFDLRNLVEDPDEIILRV----------KKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTI 224 (484)
T ss_pred cCccccccccCChHHHHHHH----------HhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhh
Confidence 999986443222 1222111 1101111111111 1 3344788999999999999999999999888777
Q ss_pred HHhh
Q 005001 690 VQRA 693 (720)
Q Consensus 690 ~~~~ 693 (720)
....
T Consensus 225 ~~~~ 228 (484)
T KOG1023|consen 225 NKGG 228 (484)
T ss_pred cccc
Confidence 6654
No 424
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=1.6e-18 Score=197.77 Aligned_cols=256 Identities=20% Similarity=0.263 Sum_probs=186.9
Q ss_pred HHHHhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCC---CCCccccceEEeecC
Q 005001 405 LQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR---HPNIVTLAGYCAEHG 481 (720)
Q Consensus 405 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~ 481 (720)
.+.-...|.+.+.||+|+||.||+|...+|+.||+|.-+......... -.+++.+++ -+.|..+..++.-.+
T Consensus 693 ~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI-----~~q~~~RLk~~~~~~~~~~~~a~~~~~ 767 (974)
T KOG1166|consen 693 FEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYI-----CLQVMERLKPQMLPSIMHISSAHVFQN 767 (974)
T ss_pred eeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeee-----hHHHHHhhchhhhcchHHHHHHHccCC
Confidence 344456688888999999999999998889999999887654321111 012223333 345666666666777
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC-------CCce
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD-------ELNP 554 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~-------~~~~ 554 (720)
.-++|+||.+.|+|.+++. ..+.+++..+..++.|+++.+++||.. +|||+||||+|+||.. ...+
T Consensus 768 ~S~lv~ey~~~Gtlld~~N----~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l 840 (974)
T KOG1166|consen 768 ASVLVSEYSPYGTLLDLIN----TNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGL 840 (974)
T ss_pred cceeeeeccccccHHHhhc----cCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccce
Confidence 8899999999999999997 678899999999999999999999999 9999999999999943 3458
Q ss_pred EEcccCCCccCCC-CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcc
Q 005001 555 HLSDCGLAALTPN-TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATP 633 (720)
Q Consensus 555 kl~Dfg~a~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~ 633 (720)
+|+|||.+..+.- .+.......++|-.+-.+|+..|..++..+|.|.++-+++-|+.|+.--. .+. . .|...
T Consensus 841 ~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q~-~~g-~-----~~~~~ 913 (974)
T KOG1166|consen 841 YLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYMEV-KNG-S-----SWMVK 913 (974)
T ss_pred EEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHHh-cCC-c-----ceecc
Confidence 9999999854321 22234456788999999999999999999999999999999999876320 000 0 00000
Q ss_pred ccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhcc
Q 005001 634 QLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 695 (720)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~~ 695 (720)
..+.+.. -.+...+++..+|..|-..=|...++...|+++..+...
T Consensus 914 -----~~~~Ry~-----------~~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~~~~~ 959 (974)
T KOG1166|consen 914 -----TNFPRYW-----------KRDMWNKFFDLLLNPDCDTLPNLQELRTELEEVLAEHFT 959 (974)
T ss_pred -----ccchhhh-----------hHHHHHHHHHHHhCcCcccchhHHHHHHHHHHHHHHHHH
Confidence 0011111 112345777778875555558888999888888776543
No 425
>PRK10345 hypothetical protein; Provisional
Probab=99.75 E-value=7e-18 Score=164.61 Aligned_cols=136 Identities=15% Similarity=0.173 Sum_probs=104.5
Q ss_pred CccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcC-----CCCCccccceEEeecC---eEE
Q 005001 413 SQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-----RHPNIVTLAGYCAEHG---QRL 484 (720)
Q Consensus 413 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~l~~~~~~~~---~~~ 484 (720)
...+.||+|+||.||. +.+....+||++..... ...+.+.+|+..++.+ .||||++++|++.++. ..+
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~--~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGD--GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCeEEEEEecccc--chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 4456899999999996 44333347888865322 2356789999999999 6799999999998873 433
Q ss_pred -EEEEe--cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHH-HHHHhcCCCCcEEecCCCCCEEeCC----CCceEE
Q 005001 485 -LVYEY--VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARAL-EYLHEVCLPSVVHRNFKSANILLDD----ELNPHL 556 (720)
Q Consensus 485 -lV~e~--~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L-~~LH~~~~~~iiH~Dlkp~NIll~~----~~~~kl 556 (720)
+|+|| +.+|+|.+++.. ..+++. ..++.|++.++ +|||++ +|+||||||+|||++. ++.++|
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~-----~~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~L 150 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQ-----CRYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVV 150 (210)
T ss_pred EEEecCCCCcchhHHHHHHc-----ccccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEE
Confidence 78999 557999999962 335554 35677888777 999999 9999999999999974 347999
Q ss_pred cccCCC
Q 005001 557 SDCGLA 562 (720)
Q Consensus 557 ~Dfg~a 562 (720)
+||+.+
T Consensus 151 iDg~G~ 156 (210)
T PRK10345 151 CDNIGE 156 (210)
T ss_pred EECCCC
Confidence 995543
No 426
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.73 E-value=5.5e-17 Score=160.82 Aligned_cols=136 Identities=21% Similarity=0.313 Sum_probs=113.5
Q ss_pred ceeccCCCcEEEEEEEcCCcEEEEEEccccccChH------HHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 416 FLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQ------EEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
+.||+|++|.||+|.. .|..+++|+......... ....+.+|+.++..+.|++|.....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 4799999999999987 677888997654332111 234577899999999999998888887777888999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
++|++|.+++... . . .+..++.+++.+|.++|+. +++|||++|.||+++ ++.++|+|||.+..
T Consensus 81 ~~G~~L~~~~~~~----~---~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSN----G---M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhc----c---H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999988621 1 1 7888999999999999999 999999999999999 78999999998764
No 427
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.73 E-value=2.4e-18 Score=180.11 Aligned_cols=174 Identities=24% Similarity=0.359 Sum_probs=130.2
Q ss_pred CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccC
Q 005001 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (720)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 560 (720)
.+.||.|++|.-.+|.+|+... ......++.....++.|++.|++| + +.+|||+||.||+...+..+||.|||
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr-~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFg 401 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRR-RTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFG 401 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCC-CcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhh
Confidence 3578999999999999999632 234567888899999999999999 5 88999999999999999999999999
Q ss_pred CCccCCCCC-----ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccc
Q 005001 561 LAALTPNTE-----RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQ 634 (720)
Q Consensus 561 ~a~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 634 (720)
+........ ....+...||..||+||.+.+..|+.++||||||++++|+++ =..+++.
T Consensus 402 l~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er---------------- 465 (516)
T KOG1033|consen 402 LVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER---------------- 465 (516)
T ss_pred heeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH----------------
Confidence 987665544 233456789999999999999999999999999999999997 2222211
Q ss_pred cccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHH
Q 005001 635 LHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSE 681 (720)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 681 (720)
...+..+.+..+...+-.+.+ .=+.|+.+++.+.|.+||++.+
T Consensus 466 ---~~t~~d~r~g~ip~~~~~d~p-~e~~ll~~lls~~p~~RP~~~~ 508 (516)
T KOG1033|consen 466 ---IATLTDIRDGIIPPEFLQDYP-EEYTLLQQLLSPSPEERPSAIE 508 (516)
T ss_pred ---HHhhhhhhcCCCChHHhhcCc-HHHHHHHHhcCCCcccCchHHH
Confidence 111111111111100111112 2247999999999999994443
No 428
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.73 E-value=3.4e-18 Score=190.75 Aligned_cols=208 Identities=25% Similarity=0.370 Sum_probs=145.7
Q ss_pred HhcCCCccceeccCCCcEEEEEEEcC-CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
...+|..++.|..|+||.||.++++. .+.+|+ ++.+...- ++- ++.....|.+|
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~-kiNkq~li-------lRn--ilt~a~npfvv--------------- 135 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQNLI-------LRN--ILTFAGNPFVV--------------- 135 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhh-cccccchh-------hhc--cccccCCccee---------------
Confidence 34678899999999999999998864 667777 44332211 110 22222344444
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|+-.+.++ ..+.++.. ++.+++|||+. +|+|||+||+|.+|+.-|++|++|||+++...
T Consensus 136 ------gDc~tllk----~~g~lPvd--------mvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GL 194 (1205)
T KOG0606|consen 136 ------GDCATLLK----NIGPLPVD--------MVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGL 194 (1205)
T ss_pred ------chhhhhcc----cCCCCcch--------hhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhh
Confidence 45555554 22334332 26789999999 99999999999999999999999999986322
Q ss_pred CC------Ccc--------ccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhc
Q 005001 567 NT------ERQ--------VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWAT 632 (720)
Q Consensus 567 ~~------~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~ 632 (720)
.. ..+ ...+.+||+.|+|||++....|...+|+|++|+|+||.+-|..||.+..+......+.
T Consensus 195 ms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~vi--- 271 (1205)
T KOG0606|consen 195 MSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVI--- 271 (1205)
T ss_pred hhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhh---
Confidence 11 000 1134689999999999999999999999999999999999999999876643221111
Q ss_pred cccccHHHHHhhcccccCC-CCChhHHHHHHHHHHHhcCCCCCCCC
Q 005001 633 PQLHDIDALAKMVDPALNG-MYPAKSLSRFADIIALCVQPEPEFRP 677 (720)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RP 677 (720)
...... ......+.+.++++.+.|+.+|..|-
T Consensus 272 -------------sd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 272 -------------SDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred -------------hhhccccccCcCCCHHHHHHHHHHHHhChHhhc
Confidence 000000 00223445788999999999999994
No 429
>smart00090 RIO RIO-like kinase.
Probab=99.72 E-value=2.7e-17 Score=164.64 Aligned_cols=144 Identities=18% Similarity=0.162 Sum_probs=110.6
Q ss_pred CCCccceeccCCCcEEEEEE--EcCCcEEEEEEccccccCh--------------------H--HHHHHHHHHHHhhcCC
Q 005001 411 SFSQEFLIGEGSLGRVYRAE--FANGKIMAVKKIDNAALSL--------------------Q--EEDNFLEAVSNMSRLR 466 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~--~~~~~~vavK~~~~~~~~~--------------------~--~~~~~~~e~~~l~~l~ 466 (720)
-|.+.+.||+|+||.||+|. ..+|+.||+|++....... . ....+.+|+..+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 37778899999999999998 5689999999987432110 0 1133567999998886
Q ss_pred CCC--ccccceEEeecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-cEEecCCC
Q 005001 467 HPN--IVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS-VVHRNFKS 543 (720)
Q Consensus 467 h~n--iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~-iiH~Dlkp 543 (720)
+.. +.+++++ ...++||||+++++|..... ........++..++.|++.++.+||+. + |+||||||
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~----~~~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp 177 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRL----KDVEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSE 177 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCccccccc----ccCCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCCh
Confidence 533 3333332 23589999999988876542 134456667789999999999999999 8 99999999
Q ss_pred CCEEeCCCCceEEcccCCCccCC
Q 005001 544 ANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 544 ~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
+||+++ ++.++|+|||.+....
T Consensus 178 ~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 178 YNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred hhEEEE-CCCEEEEEChhhhccC
Confidence 999999 8899999999987543
No 430
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.72 E-value=8.6e-20 Score=162.65 Aligned_cols=171 Identities=25% Similarity=0.378 Sum_probs=146.8
Q ss_pred CCCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEE
Q 005001 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLN 159 (720)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 159 (720)
.++++.|.|++|.++ .+|+.+++|.+|+.|++++|+|+ .+|.++. ++|+.|+++.|++. .+|..|+.++.|+.||
T Consensus 32 ~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 357889999999997 67888999999999999999999 7888886 89999999999999 8999999999999999
Q ss_pred cccccccc-ccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCC-CCcCeEEccCccCcc
Q 005001 160 VSRNSLTQ-SIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSG-LPLTTLNVANNHFSG 237 (720)
Q Consensus 160 L~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~l~l~~N~l~g 237 (720)
|.+|+|+. .+|..|-.|+.|+.|+|++|.|. .+|..++++++|+.|.+.+|.+-..+..... ..|++|.+.+|+++
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll~lpkeig~lt~lrelhiqgnrl~- 186 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLLSLPKEIGDLTRLRELHIQGNRLT- 186 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchhhCcHHHHHHHHHHHHhcccceee-
Confidence 99999984 57889999999999999999999 8999999999999999999998765433333 34899999999999
Q ss_pred cCcccccccc------eeeecCCcCC
Q 005001 238 WIPRELISIR------TFIYDGNSFD 257 (720)
Q Consensus 238 ~ip~~l~~l~------~l~l~~n~~~ 257 (720)
.+|++++++. .+.+..|||-
T Consensus 187 vlppel~~l~l~~~k~v~r~E~NPwv 212 (264)
T KOG0617|consen 187 VLPPELANLDLVGNKQVMRMEENPWV 212 (264)
T ss_pred ecChhhhhhhhhhhHHHHhhhhCCCC
Confidence 7888887654 2345566553
No 431
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.69 E-value=1.4e-16 Score=156.06 Aligned_cols=140 Identities=18% Similarity=0.128 Sum_probs=108.5
Q ss_pred CCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccCh--------------------HHHHHHHHHHHHhhcCCCCC-
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSL--------------------QEEDNFLEAVSNMSRLRHPN- 469 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~--------------------~~~~~~~~e~~~l~~l~h~n- 469 (720)
.|...+.||+|+||.||++...+|+.||||++....... .......+|...+..+.|++
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 377788999999999999988889999999875432110 01123567888888887774
Q ss_pred -ccccceEEeecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEe
Q 005001 470 -IVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL 548 (720)
Q Consensus 470 -iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll 548 (720)
+...++ ....++||||+++++|.+... ......++.+++.++.++|+. +|+||||||+||++
T Consensus 96 ~v~~~~~----~~~~~lv~e~~~g~~L~~~~~----------~~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Nill 158 (198)
T cd05144 96 PVPKPID----WNRHAVVMEYIDGVELYRVRV----------LEDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNILV 158 (198)
T ss_pred CCCceee----cCCceEEEEEeCCcchhhccc----------cccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccEEE
Confidence 333333 345689999999999876542 033567889999999999998 99999999999999
Q ss_pred CCCCceEEcccCCCccCCC
Q 005001 549 DDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 549 ~~~~~~kl~Dfg~a~~~~~ 567 (720)
++++.++|+|||++.....
T Consensus 159 ~~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 159 DDDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred cCCCcEEEEECCccccCCC
Confidence 9999999999999865543
No 432
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.68 E-value=2.1e-16 Score=155.15 Aligned_cols=133 Identities=21% Similarity=0.337 Sum_probs=107.7
Q ss_pred eeccCCCcEEEEEEEcCCcEEEEEEccccccC------hHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEec
Q 005001 417 LIGEGSLGRVYRAEFANGKIMAVKKIDNAALS------LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYV 490 (720)
Q Consensus 417 ~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 490 (720)
.||+|+||.||+|.+ +|..|++|........ .....++.+|++++..++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 389999999999985 5778889986533211 112356778999999999888766666666677789999999
Q ss_pred CCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
+|++|.+++... .. .++.+++.+|.+||+. +++|+|++|+||+++ ++.++++|||++...
T Consensus 80 ~g~~l~~~~~~~----~~-------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 80 EGKPLKDVIEEG----ND-------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CCccHHHHHhhc----HH-------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 999999987521 11 7899999999999999 999999999999999 789999999998753
No 433
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.68 E-value=2.5e-16 Score=177.66 Aligned_cols=142 Identities=18% Similarity=0.314 Sum_probs=113.3
Q ss_pred HhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccC-----hHHHHHHHHHHHHhhcCCCCCccccceEEeecCe
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALS-----LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (720)
....|...+.||+|+||+||+|.+.+...++.+++.+.... ......+.+|++++..++|++++....++.....
T Consensus 331 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 331 VKRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred cccccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 34455678899999999999998765444333333221111 1223568899999999999999988877777778
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCC
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a 562 (720)
.++||||+++++|.+++. ....++.+++.+|.+||+. +++||||||+||++ .++.++|+|||++
T Consensus 411 ~~lv~E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla 474 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE------------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLG 474 (535)
T ss_pred CEEEEEecCCCcHHHHHH------------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCccc
Confidence 899999999999999884 3567899999999999999 99999999999999 6779999999998
Q ss_pred ccC
Q 005001 563 ALT 565 (720)
Q Consensus 563 ~~~ 565 (720)
+..
T Consensus 475 ~~~ 477 (535)
T PRK09605 475 KYS 477 (535)
T ss_pred ccC
Confidence 753
No 434
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.61 E-value=2.8e-17 Score=146.74 Aligned_cols=156 Identities=29% Similarity=0.486 Sum_probs=139.0
Q ss_pred cccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEEccccccccccccccCCCCCC
Q 005001 102 LLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGL 179 (720)
Q Consensus 102 ~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 179 (720)
.+.++++.+.|-||+|+++ .+|..+. .+|+.|++++|+++ .+|.+++.|++|+.|+++-|+|. ..|..||.++.|
T Consensus 28 gLf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~l 104 (264)
T KOG0617|consen 28 GLFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPAL 104 (264)
T ss_pred cccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchh
Confidence 4667888999999999999 7888886 89999999999999 89999999999999999999998 789999999999
Q ss_pred CeeecCCCccc-CCCCccccCCCCCCeeEeccccccccccccCC-CCcCeEEccCccCcccCccccc---ccceeeecCC
Q 005001 180 ATLDLSFNNFS-GDLPNSFISLSNISSLYLQNNQVTGSLNVFSG-LPLTTLNVANNHFSGWIPRELI---SIRTFIYDGN 254 (720)
Q Consensus 180 ~~L~l~~N~l~-g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~l~l~~N~l~g~ip~~l~---~l~~l~l~~n 254 (720)
+.|||..|+|. ..+|..|..|..|..|+|++|.+.-.++.... .+|+.|.+.+|.+- .+|.+++ .|+.|.+.||
T Consensus 105 evldltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 105 EVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGN 183 (264)
T ss_pred hhhhccccccccccCCcchhHHHHHHHHHhcCCCcccCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccc
Confidence 99999999997 47899999999999999999999987766544 56999999999998 6888765 5667889999
Q ss_pred cCCCCCC
Q 005001 255 SFDNGPA 261 (720)
Q Consensus 255 ~~~~~~~ 261 (720)
.+.-.|+
T Consensus 184 rl~vlpp 190 (264)
T KOG0617|consen 184 RLTVLPP 190 (264)
T ss_pred eeeecCh
Confidence 9986654
No 435
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.60 E-value=6.5e-17 Score=170.11 Aligned_cols=170 Identities=27% Similarity=0.332 Sum_probs=131.6
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC---CccceeccccccCcCCCCccccccCCccEEEc
Q 005001 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP---PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (720)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~---~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 160 (720)
.++.|||++|+|. ..|..+-.-+++-+|+||+|+|. +||..+. ..|-.||||+|++. .+|+.+..|.+|+.|+|
T Consensus 104 dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~L 180 (1255)
T KOG0444|consen 104 DLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKL 180 (1255)
T ss_pred cceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhc
Confidence 5778888888886 56777777888888888888887 7887765 55667888888888 77888888888888888
Q ss_pred cccccc-------------------------cccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccc
Q 005001 161 SRNSLT-------------------------QSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTG 215 (720)
Q Consensus 161 ~~N~l~-------------------------~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~ 215 (720)
++|.|. ..+|.++-.|.+|..+|||.|+|. .+|+.+.++.+|..|+||+|+|+.
T Consensus 181 s~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~ite 259 (1255)
T KOG0444|consen 181 SNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITE 259 (1255)
T ss_pred CCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCceee
Confidence 888543 225677777888999999999998 889999999999999999999985
Q ss_pred ccccc-CCCCcCeEEccCccCcccCccccccc---ceeeecCCcCCC
Q 005001 216 SLNVF-SGLPLTTLNVANNHFSGWIPRELISI---RTFIYDGNSFDN 258 (720)
Q Consensus 216 ~~~~~-~~~~L~~l~l~~N~l~g~ip~~l~~l---~~l~l~~n~~~~ 258 (720)
.--.. .-.+|++|+||.|+|+ .+|+.++.| +.|...+|.++.
T Consensus 260 L~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~F 305 (1255)
T KOG0444|consen 260 LNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTF 305 (1255)
T ss_pred eeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccc
Confidence 32111 1135889999999998 788877654 456677777665
No 436
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.60 E-value=9.1e-17 Score=168.24 Aligned_cols=183 Identities=26% Similarity=0.313 Sum_probs=139.5
Q ss_pred eeEecCCCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCC--CCccceeccccccCcCCCCccccccCC
Q 005001 77 GVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQL--PPNLTSLNLASNNFSGNLPYSIASMVS 154 (720)
Q Consensus 77 gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~--~~~L~~L~L~~N~l~g~~p~~~~~l~~ 154 (720)
|+.....++..|+|..|+++..-...+.+|+.|+.|+||+|.|...-+.++ .++|++|+|++|+|+..-+.+|..|..
T Consensus 263 G~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~ 342 (873)
T KOG4194|consen 263 GAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQ 342 (873)
T ss_pred cceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHH
Confidence 444444567888888888887777788888888888888888876555443 478888888888888777778888888
Q ss_pred ccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCc---cccCCCCCCeeEeccccccccc-cccCCC-CcCeEE
Q 005001 155 LSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPN---SFISLSNISSLYLQNNQVTGSL-NVFSGL-PLTTLN 229 (720)
Q Consensus 155 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~---~~~~l~~L~~L~l~~N~l~~~~-~~~~~~-~L~~l~ 229 (720)
|+.|+|++|++...-...|..+++|+.|||++|.|++.|-+ .|.+|++|+.|+|.+|+|.... ..+.+. .|+.||
T Consensus 343 Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~Ld 422 (873)
T KOG4194|consen 343 LEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLD 422 (873)
T ss_pred hhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceec
Confidence 88888888888877777888888888888888888876643 3667888888888888887654 345554 488888
Q ss_pred ccCccCcccCccccc--ccceeeecCCcCCCC
Q 005001 230 VANNHFSGWIPRELI--SIRTFIYDGNSFDNG 259 (720)
Q Consensus 230 l~~N~l~g~ip~~l~--~l~~l~l~~n~~~~~ 259 (720)
|.+|.|...-|+.|. .|+.|.+..-+|.|.
T Consensus 423 L~~NaiaSIq~nAFe~m~Lk~Lv~nSssflCD 454 (873)
T KOG4194|consen 423 LGDNAIASIQPNAFEPMELKELVMNSSSFLCD 454 (873)
T ss_pred CCCCcceeecccccccchhhhhhhcccceEEe
Confidence 888888877777664 556666766666653
No 437
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.60 E-value=1.2e-16 Score=179.49 Aligned_cols=258 Identities=22% Similarity=0.295 Sum_probs=191.1
Q ss_pred cCCCccceeccCCCcEEEEEEEc--CCcEEEEEEccccccChHHHHHHHHHHHHhhcCC-CCCccccceEEeecCeEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA--NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV 486 (720)
..|...+.||+|+|+.|-..... ....+|+|.+...............|..+-..+. |+|++.+++.....+..+++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 45666777999999999888653 3445666766544323333444555777767775 99999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCcEEecCCCCCEEeCCCC-ceEEcccCCCcc
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLH-EVCLPSVVHRNFKSANILLDDEL-NPHLSDCGLAAL 564 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH-~~~~~~iiH~Dlkp~NIll~~~~-~~kl~Dfg~a~~ 564 (720)
++|..++++.+.+. .......+...+-.++.|+..++.|+| .. ++.|||+||+|.+++..+ ..++.|||+|..
T Consensus 100 ~~~s~g~~~f~~i~--~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At~ 174 (601)
T KOG0590|consen 100 LSYSDGGSLFSKIS--HPDSTGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLATA 174 (601)
T ss_pred cCcccccccccccc--cCCccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhcc
Confidence 99999999998873 112225566677788999999999999 77 999999999999999999 999999999987
Q ss_pred CCC-C-Cccccccccc-cccccCccccccCC-CcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHH
Q 005001 565 TPN-T-ERQVSTQMVG-AFGYSAPEFALSGI-YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDA 640 (720)
Q Consensus 565 ~~~-~-~~~~~~~~~g-t~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 640 (720)
+.. . ........+| ++.|+|||...+.. ..+..|+||.|+++.-+++|..|+.......... ..|....
T Consensus 175 ~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~-~~~~~~~------ 247 (601)
T KOG0590|consen 175 YRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRY-SSWKSNK------ 247 (601)
T ss_pred ccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccc-eeecccc------
Confidence 665 2 2223344578 99999999999854 4678999999999999999999998655433110 1110000
Q ss_pred HHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 641 LAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
................+++.+++..+|..|.+.+++...
T Consensus 248 ------~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d 286 (601)
T KOG0590|consen 248 ------GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLD 286 (601)
T ss_pred ------cccccCccccCChhhhhcccccccCCchhcccccccccc
Confidence 000011122334556789999999999999998887644
No 438
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.59 E-value=6e-15 Score=143.17 Aligned_cols=139 Identities=21% Similarity=0.250 Sum_probs=97.4
Q ss_pred cceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHH----------------------HHHHHHhhcCCCCC--c
Q 005001 415 EFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNF----------------------LEAVSNMSRLRHPN--I 470 (720)
Q Consensus 415 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~----------------------~~e~~~l~~l~h~n--i 470 (720)
.+.||+|+||.||+|...+++.||||.+............+ ..|...+..+.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 35799999999999988889999999886543221111111 23455555543332 3
Q ss_pred cccceEEeecCeEEEEEEecCCCCHHH-HhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEEecCCCCCEEe
Q 005001 471 VTLAGYCAEHGQRLLVYEYVGNGNLHD-MLHFADDSSKNLTWNARVRVALGTARALEYLHE-VCLPSVVHRNFKSANILL 548 (720)
Q Consensus 471 v~l~~~~~~~~~~~lV~e~~~~gsL~~-~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~-~~~~~iiH~Dlkp~NIll 548 (720)
.+.+++ ...++||||++++++.. .+.. .... .++..++.+++.++.++|. . +|+||||||+||++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~-----~~~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili 148 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKD-----VRLL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILV 148 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhh-----hhhc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEE
Confidence 333332 24689999999854421 1110 0001 5678899999999999999 7 99999999999999
Q ss_pred CCCCceEEcccCCCccCCC
Q 005001 549 DDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 549 ~~~~~~kl~Dfg~a~~~~~ 567 (720)
+ ++.++++|||.+.....
T Consensus 149 ~-~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 149 D-DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred E-CCcEEEEECcccccccC
Confidence 9 88999999999875533
No 439
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.58 E-value=1.1e-14 Score=166.82 Aligned_cols=211 Identities=21% Similarity=0.295 Sum_probs=134.8
Q ss_pred hhhhccCCChHHHHHHHHHHHhcCCCCCCCC----CCCCCCCCCCCCC--------------ceeEecCCCEE-------
Q 005001 32 LSLVQCTTDSSDVQALQVLYTSLNSPSVLTN----WKGNEGDPCGESW--------------KGVACEGSAVV------- 86 (720)
Q Consensus 32 ~~~~~~~~~~~d~~al~~~~~~~~~~~~l~~----w~~~~~~~c~~~w--------------~gv~c~~~~v~------- 86 (720)
+......+..+|.+.++++.+.+..|..+.+ |.+. .++|.-.- ..|.|.+..|+
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~-~~fc~~~~~~~~~l~~~~~~~~~tv~~~~~~vt~l~~~g~ 131 (754)
T PRK15370 53 LCHPPETASPEEIKSKFECLRMLAFPAYADNIQYSRGGA-DQYCILSENSQEILSIVFNTEGYTVEGGGKSVTYTRVTES 131 (754)
T ss_pred HhCCCCCCCHHHHHHHHHHHHHhcCCchhhccccccCCC-CcccccCCcchhhheeeecCCceEEecCCCcccccccccc
Confidence 3444566778999999999999999987777 9865 48884322 23888654443
Q ss_pred --------------------------------------------------EEEcCCCCCcccccccccCCCCCCEEEccC
Q 005001 87 --------------------------------------------------SIDISGLGLSGTMGYLLSDLLSLRKFDLSG 116 (720)
Q Consensus 87 --------------------------------------------------~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~ 116 (720)
.|+|++++++. +|..+. +.|+.|+|++
T Consensus 132 ~~~~~~~~~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~ 208 (754)
T PRK15370 132 EQASSASGSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLTT-IPACIP--EQITTLILDN 208 (754)
T ss_pred cccccCCCCCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcCc-CCcccc--cCCcEEEecC
Confidence 35666666663 444443 4677788888
Q ss_pred CCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCcc
Q 005001 117 NSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNS 196 (720)
Q Consensus 117 N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~ 196 (720)
|+|+ .+|..+.++|++|+|++|+|+ .+|..+. .+|+.|+|++|+++ .+|..+. ++|+.|+|++|+|+ .+|..
T Consensus 209 N~Lt-sLP~~l~~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~ 280 (754)
T PRK15370 209 NELK-SLPENLQGNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPEN 280 (754)
T ss_pred CCCC-cCChhhccCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccc
Confidence 8777 567666677788888877777 5565443 36777777777776 4555553 46777777777777 46665
Q ss_pred ccCCCCCCeeEeccccccccccccCCCCcCeEEccCccCcccCccc-ccccceeeecCCcCCC
Q 005001 197 FISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPRE-LISIRTFIYDGNSFDN 258 (720)
Q Consensus 197 ~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~g~ip~~-l~~l~~l~l~~n~~~~ 258 (720)
+. ++|+.|+|++|+|++.+.. ...+|+.|+|++|+|++ +|.. ..+|+.|.+.+|.+.+
T Consensus 281 l~--~sL~~L~Ls~N~Lt~LP~~-lp~sL~~L~Ls~N~Lt~-LP~~l~~sL~~L~Ls~N~Lt~ 339 (754)
T PRK15370 281 LP--EELRYLSVYDNSIRTLPAH-LPSGITHLNVQSNSLTA-LPETLPPGLKTLEAGENALTS 339 (754)
T ss_pred cC--CCCcEEECCCCccccCccc-chhhHHHHHhcCCcccc-CCccccccceeccccCCcccc
Confidence 53 4677777777777753221 11235555555555553 3332 2345555555555544
No 440
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.58 E-value=1.4e-14 Score=134.99 Aligned_cols=136 Identities=19% Similarity=0.199 Sum_probs=112.8
Q ss_pred ccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCC--CCccccceEEeecCeEEEEEEecC
Q 005001 414 QEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH--PNIVTLAGYCAEHGQRLLVYEYVG 491 (720)
Q Consensus 414 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lV~e~~~ 491 (720)
..+.||+|.++.||++...+ ..+++|....... ...+.+|+..+..++| .++++++++....+..++++||++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~ 76 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIE 76 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecC
Confidence 34679999999999998864 7889998865432 4567888888888866 588899888888888999999999
Q ss_pred CCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 492 NGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 492 ~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
++.+..+ +......++.+++++++++|....++++|+|++|+||++++.+.++++|||.+...
T Consensus 77 g~~~~~~-----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 77 GETLDEV-----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred CeecccC-----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 8766542 45666778999999999999864447999999999999999899999999998643
No 441
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.57 E-value=2.9e-14 Score=143.14 Aligned_cols=137 Identities=16% Similarity=0.212 Sum_probs=105.8
Q ss_pred ceec-cCCCcEEEEEEEcCCcEEEEEEcccccc-----------ChHHHHHHHHHHHHhhcCCCCCc--cccceEEeec-
Q 005001 416 FLIG-EGSLGRVYRAEFANGKIMAVKKIDNAAL-----------SLQEEDNFLEAVSNMSRLRHPNI--VTLAGYCAEH- 480 (720)
Q Consensus 416 ~~lG-~G~fg~Vy~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~~~e~~~l~~l~h~ni--v~l~~~~~~~- 480 (720)
..|| .|+.|+||.++.. +..+++|.+..... .......+.+|+.++.+++|++| +..+++....
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 4688 8999999999885 77888888753211 12234567889999999988875 6666664432
Q ss_pred C---eEEEEEEecCC-CCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEE
Q 005001 481 G---QRLLVYEYVGN-GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHL 556 (720)
Q Consensus 481 ~---~~~lV~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl 556 (720)
+ ..++|||+++| .+|.+++. ...++.. .+.+++.+|.+||+. ||+||||||+|||++.++.++|
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~-----~~~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~L 183 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQ-----EAPLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWL 183 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHh-----cCCCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEE
Confidence 2 23599999997 69998885 2344543 356899999999999 9999999999999999999999
Q ss_pred cccCCCccC
Q 005001 557 SDCGLAALT 565 (720)
Q Consensus 557 ~Dfg~a~~~ 565 (720)
+|||.+...
T Consensus 184 IDfg~~~~~ 192 (239)
T PRK01723 184 IDFDRGELR 192 (239)
T ss_pred EECCCcccC
Confidence 999988654
No 442
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.54 E-value=3.7e-15 Score=156.35 Aligned_cols=172 Identities=23% Similarity=0.269 Sum_probs=133.4
Q ss_pred EEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEEccc
Q 005001 85 VVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (720)
Q Consensus 85 v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 162 (720)
+..|||++|.|+.+-+..|-+|++|+.++|.+|.++ .||.... .+|+.|+|.+|.|+..-.+++.-++.|+.||||.
T Consensus 80 t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSr 158 (873)
T KOG4194|consen 80 TQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSR 158 (873)
T ss_pred eeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhh
Confidence 566999999999999999999999999999999999 7886554 5788888888888876677888888888888888
Q ss_pred cccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEecccccccccc-ccC-CCCcCeEEccCccCc---c
Q 005001 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLN-VFS-GLPLTTLNVANNHFS---G 237 (720)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~-~~~L~~l~l~~N~l~---g 237 (720)
|.|+...-++|..-.++++|+|++|+|+..--..|.++.+|.+|.|+.|+|+..+. .|. ...|+.|+|..|+|. |
T Consensus 159 N~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ 238 (873)
T KOG4194|consen 159 NLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEG 238 (873)
T ss_pred chhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehh
Confidence 88886666677777788888888888887667778888888888888888887554 333 234888888888774 2
Q ss_pred cCcccccccceeeecCCcCC
Q 005001 238 WIPRELISIRTFIYDGNSFD 257 (720)
Q Consensus 238 ~ip~~l~~l~~l~l~~n~~~ 257 (720)
.--..+.+|+.|.+..|.+.
T Consensus 239 ltFqgL~Sl~nlklqrN~I~ 258 (873)
T KOG4194|consen 239 LTFQGLPSLQNLKLQRNDIS 258 (873)
T ss_pred hhhcCchhhhhhhhhhcCcc
Confidence 22234455566666666543
No 443
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.51 E-value=9.9e-16 Score=161.36 Aligned_cols=171 Identities=23% Similarity=0.349 Sum_probs=116.2
Q ss_pred CEEEEEcCCCCCc-ccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEEc
Q 005001 84 AVVSIDISGLGLS-GTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (720)
Q Consensus 84 ~v~~l~l~~~~l~-g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 160 (720)
-|..+|+++|.++ +..|.....+++++.|-|...++. .+|.+++ .+|+.|.+++|++. .+-..++.|+.|+.+++
T Consensus 8 FVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~ 85 (1255)
T KOG0444|consen 8 FVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIV 85 (1255)
T ss_pred eeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhh
Confidence 3666777777777 466777777777777777777776 6676665 67777777777776 55666777777777777
Q ss_pred ccccccc-ccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEecccccccccc-ccCCC-CcCeEEccCccCcc
Q 005001 161 SRNSLTQ-SIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLN-VFSGL-PLTTLNVANNHFSG 237 (720)
Q Consensus 161 ~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~-~L~~l~l~~N~l~g 237 (720)
.+|+|.. -||..+-.|..|+.||||+|+|. ..|..+..-+++-.|+||+|+|...+. .+..+ .|-.||||+|+|.
T Consensus 86 R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe- 163 (1255)
T KOG0444|consen 86 RDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE- 163 (1255)
T ss_pred hccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-
Confidence 7777753 35666667777777777777777 677777777777777777777766543 23332 3667777777776
Q ss_pred cCccc---ccccceeeecCCcCCC
Q 005001 238 WIPRE---LISIRTFIYDGNSFDN 258 (720)
Q Consensus 238 ~ip~~---l~~l~~l~l~~n~~~~ 258 (720)
.+|+. +..|++|.+++||+..
T Consensus 164 ~LPPQ~RRL~~LqtL~Ls~NPL~h 187 (1255)
T KOG0444|consen 164 MLPPQIRRLSMLQTLKLSNNPLNH 187 (1255)
T ss_pred hcCHHHHHHhhhhhhhcCCChhhH
Confidence 44443 3456677777777543
No 444
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.50 E-value=4.3e-14 Score=161.86 Aligned_cols=162 Identities=20% Similarity=0.292 Sum_probs=121.3
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEccc
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 162 (720)
..++.|+|++|+|+. +|..+. ++|++|+|++|+|+ .+|..+..+|+.|+|++|+++ .+|..+. .+|+.|+|++
T Consensus 199 ~~L~~L~Ls~N~Lts-LP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~ 271 (754)
T PRK15370 199 EQITTLILDNNELKS-LPENLQ--GNIKTLYANSNQLT-SIPATLPDTIQEMELSINRIT-ELPERLP--SALQSLDLFH 271 (754)
T ss_pred cCCcEEEecCCCCCc-CChhhc--cCCCEEECCCCccc-cCChhhhccccEEECcCCccC-cCChhHh--CCCCEEECcC
Confidence 468899999999985 555544 58999999999998 678877788999999999998 7787664 5899999999
Q ss_pred cccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCCCCcCeEEccCccCcccCccc
Q 005001 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPRE 242 (720)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~g~ip~~ 242 (720)
|+|+ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|++++|+|+..+ .....+|+.|++++|.|++ +|..
T Consensus 272 N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp--~sL~~L~Ls~N~Lt~LP-~~l~~sL~~L~Ls~N~Lt~-LP~~ 343 (754)
T PRK15370 272 NKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHLP--SGITHLNVQSNSLTALP-ETLPPGLKTLEAGENALTS-LPAS 343 (754)
T ss_pred CccC-ccccccC--CCCcEEECCCCccc-cCcccch--hhHHHHHhcCCccccCC-ccccccceeccccCCcccc-CChh
Confidence 9998 4676654 58999999999998 4665543 46777888888877533 2223457777777777774 5654
Q ss_pred c-cccceeeecCCcCCCC
Q 005001 243 L-ISIRTFIYDGNSFDNG 259 (720)
Q Consensus 243 l-~~l~~l~l~~n~~~~~ 259 (720)
+ .+|+.|++.+|.+...
T Consensus 344 l~~sL~~L~Ls~N~L~~L 361 (754)
T PRK15370 344 LPPELQVLDVSKNQITVL 361 (754)
T ss_pred hcCcccEEECCCCCCCcC
Confidence 4 3677777777776643
No 445
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.49 E-value=3e-15 Score=150.53 Aligned_cols=192 Identities=27% Similarity=0.351 Sum_probs=136.3
Q ss_pred CCCCCCC---ceeEecCC-----------CEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--Cccc
Q 005001 69 DPCGESW---KGVACEGS-----------AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLT 132 (720)
Q Consensus 69 ~~c~~~w---~gv~c~~~-----------~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~ 132 (720)
.+|.|+= .-|.|+.. ..+.|+|..|+|+...+.+|+.+++|+.||||+|+|+..-|..|. ++|.
T Consensus 39 ~pC~Cs~~~g~~VdCr~~GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~ 118 (498)
T KOG4237|consen 39 APCTCSDVEGGIVDCRGKGLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLL 118 (498)
T ss_pred CCcccCCCCCceEEccCCCcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhh
Confidence 4565544 34899753 467899999999999999999999999999999999987787664 4554
Q ss_pred eecc-ccccCcCCCCccccccC------------------------CccEEEcccccccccc------------------
Q 005001 133 SLNL-ASNNFSGNLPYSIASMV------------------------SLSYLNVSRNSLTQSI------------------ 169 (720)
Q Consensus 133 ~L~L-~~N~l~g~~p~~~~~l~------------------------~L~~L~L~~N~l~~~~------------------ 169 (720)
+|-| ++|+|+..--..|++|. +|..|.|..|.+...-
T Consensus 119 ~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~n 198 (498)
T KOG4237|consen 119 SLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQN 198 (498)
T ss_pred HHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcC
Confidence 4444 44777732223444443 4433333333222100
Q ss_pred -------------------------------------------------------------------c-cccCCCCCCCe
Q 005001 170 -------------------------------------------------------------------G-DIFGNLAGLAT 181 (720)
Q Consensus 170 -------------------------------------------------------------------p-~~~~~l~~L~~ 181 (720)
| ..|..|++|+.
T Consensus 199 p~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~ 278 (498)
T KOG4237|consen 199 PFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRK 278 (498)
T ss_pred ccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceE
Confidence 0 12445778888
Q ss_pred eecCCCcccCCCCccccCCCCCCeeEecccccccccc-ccCCCC-cCeEEccCccCcccCcccc---cccceeeecCCcC
Q 005001 182 LDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLN-VFSGLP-LTTLNVANNHFSGWIPREL---ISIRTFIYDGNSF 256 (720)
Q Consensus 182 L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~-L~~l~l~~N~l~g~ip~~l---~~l~~l~l~~n~~ 256 (720)
|+|++|+|++.-+.+|.++..|++|+|..|+|...-. .|.+.+ |++|+|.+|+|+-.-|-.| .++.++.+.+|||
T Consensus 279 lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~ 358 (498)
T KOG4237|consen 279 LNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPF 358 (498)
T ss_pred eccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcc
Confidence 8888888888778888888888888888888876432 344444 8999999999997777666 4677889999999
Q ss_pred CCCC
Q 005001 257 DNGP 260 (720)
Q Consensus 257 ~~~~ 260 (720)
+|+.
T Consensus 359 ~CnC 362 (498)
T KOG4237|consen 359 NCNC 362 (498)
T ss_pred cCcc
Confidence 9864
No 446
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.48 E-value=4.5e-14 Score=138.97 Aligned_cols=207 Identities=23% Similarity=0.342 Sum_probs=147.9
Q ss_pred HHHhhcCCCCCccccceEEeec-----CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 005001 459 VSNMSRLRHPNIVTLAGYCAEH-----GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533 (720)
Q Consensus 459 ~~~l~~l~h~niv~l~~~~~~~-----~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~ 533 (720)
+..+-.+.|.|||+++.|+.+. ....++.|||..|++..+|++.+.....+......+++.||+.||.|||+. .
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~ 196 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-D 196 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-C
Confidence 3445556799999999998654 356899999999999999998777777888889999999999999999995 6
Q ss_pred CCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccc---cccccccccccCccccccCCCcccchhhhHHHHHHHHH
Q 005001 534 PSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV---STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELL 610 (720)
Q Consensus 534 ~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ell 610 (720)
|.|+|+++.-+-|++..+|-+||.--.-....+...... ...-.+-++|.+||.=.....+.++|||+||....||.
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred CccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence 799999999999999999999985322111111111000 11124668999999887777888999999999999999
Q ss_pred hCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 611 TGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 611 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
.+..--......... .+.....+....++ .-++++.+|++..|..||+|.+++.+.
T Consensus 277 ilEiq~tnseS~~~~------------ee~ia~~i~~len~--------lqr~~i~kcl~~eP~~rp~ar~llfHp 332 (458)
T KOG1266|consen 277 ILEIQSTNSESKVEV------------EENIANVIIGLENG--------LQRGSITKCLEGEPNGRPDARLLLFHP 332 (458)
T ss_pred HheeccCCCcceeeh------------hhhhhhheeeccCc--------cccCcCcccccCCCCCCcchhhhhcCc
Confidence 877642211111100 01111111111110 013688999999999999999988663
No 447
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.43 E-value=2e-15 Score=151.80 Aligned_cols=167 Identities=23% Similarity=0.346 Sum_probs=120.3
Q ss_pred EEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC-CccceeccccccCcCCCCccccccCCccEEEcccc
Q 005001 85 VVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP-PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRN 163 (720)
Q Consensus 85 v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~-~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N 163 (720)
+..++..+|+++ ++|+.++++.+|..|++.+|++....|..+. +.|+.||+..|-++ .+|+.++.|.+|.-|+|.+|
T Consensus 139 l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~N 216 (565)
T KOG0472|consen 139 LEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRN 216 (565)
T ss_pred hhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhc
Confidence 445666677776 5677777788888888888888744444443 67888888888777 77888888888888888888
Q ss_pred ccccccccccCCCCCCCeeecCCCcccCCCCcccc-CCCCCCeeEeccccccccccccCC-CCcCeEEccCccCcccCcc
Q 005001 164 SLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFI-SLSNISSLYLQNNQVTGSLNVFSG-LPLTTLNVANNHFSGWIPR 241 (720)
Q Consensus 164 ~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~l~l~~N~l~g~ip~ 241 (720)
+|. .+| +|+++..|.+|+++.|+++ .+|.+.+ .+++|.+|||.+|+++..+..... .+|+.||||+|.|+ .+|.
T Consensus 217 ki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklke~Pde~clLrsL~rLDlSNN~is-~Lp~ 292 (565)
T KOG0472|consen 217 KIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLKEVPDEICLLRSLERLDLSNNDIS-SLPY 292 (565)
T ss_pred ccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccccCchHHHHhhhhhhhcccCCccc-cCCc
Confidence 887 445 7778888888888888887 6776665 778888888888888765544333 34888888888888 4666
Q ss_pred ccccc--ceeeecCCcCC
Q 005001 242 ELISI--RTFIYDGNSFD 257 (720)
Q Consensus 242 ~l~~l--~~l~l~~n~~~ 257 (720)
+++++ +.|.+.|||+.
T Consensus 293 sLgnlhL~~L~leGNPlr 310 (565)
T KOG0472|consen 293 SLGNLHLKFLALEGNPLR 310 (565)
T ss_pred ccccceeeehhhcCCchH
Confidence 66654 45666777764
No 448
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.43 E-value=5e-13 Score=152.27 Aligned_cols=157 Identities=25% Similarity=0.358 Sum_probs=83.3
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCcccc-------------
Q 005001 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIA------------- 150 (720)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~------------- 150 (720)
+++.|+|.+|+|+. +|. .+++|++|+|++|+|+ .+|. +.++|+.|+|++|.|+ .+|..+.
T Consensus 223 ~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lt-sLP~-lp~sL~~L~Ls~N~L~-~Lp~lp~~L~~L~Ls~N~Lt 295 (788)
T PRK15387 223 HITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPV-LPPGLLELSIFSNPLT-HLPALPSGLCKLWIFGNQLT 295 (788)
T ss_pred CCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccC-cccC-cccccceeeccCCchh-hhhhchhhcCEEECcCCccc
Confidence 56777777777764 343 2467777777777777 4453 2345555555555554 2222110
Q ss_pred ----ccCCccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCCCCcC
Q 005001 151 ----SMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLT 226 (720)
Q Consensus 151 ----~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~ 226 (720)
.+++|++|+|++|+|++ +|.. ..+|+.|++++|+|+ .+|.. ..+|+.|+|++|+|++.++. ..+|+
T Consensus 296 ~LP~~p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~-~LP~l---p~~Lq~LdLS~N~Ls~LP~l--p~~L~ 365 (788)
T PRK15387 296 SLPVLPPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLT-SLPTL---PSGLQELSVSDNQLASLPTL--PSELY 365 (788)
T ss_pred cccccccccceeECCCCcccc-CCCC---cccccccccccCccc-ccccc---ccccceEecCCCccCCCCCC--Ccccc
Confidence 12455666666666654 2221 123334444444444 23321 13567777777777753321 12355
Q ss_pred eEEccCccCcccCcccccccceeeecCCcCCC
Q 005001 227 TLNVANNHFSGWIPRELISIRTFIYDGNSFDN 258 (720)
Q Consensus 227 ~l~l~~N~l~g~ip~~l~~l~~l~l~~n~~~~ 258 (720)
.|++++|+|+ .+|....+|+.|++++|.+..
T Consensus 366 ~L~Ls~N~L~-~LP~l~~~L~~LdLs~N~Lt~ 396 (788)
T PRK15387 366 KLWAYNNRLT-SLPALPSGLKELIVSGNRLTS 396 (788)
T ss_pred eehhhccccc-cCcccccccceEEecCCcccC
Confidence 6666666666 355555556666666666554
No 449
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.41 E-value=7.8e-13 Score=150.70 Aligned_cols=162 Identities=22% Similarity=0.348 Sum_probs=103.0
Q ss_pred EecCCCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEE
Q 005001 79 ACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYL 158 (720)
Q Consensus 79 ~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L 158 (720)
.|-..+-..|+|++++|+ .+|+.+. ++|+.|+|++|+|+ .+|. +.++|++|+|++|+|+ .+|.. .++|+.|
T Consensus 197 ~Cl~~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~-lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L 267 (788)
T PRK15387 197 ACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA-LPPELRTLEVSGNQLT-SLPVL---PPGLLEL 267 (788)
T ss_pred HHhcCCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCC-CCCCCcEEEecCCccC-cccCc---cccccee
Confidence 354445567999999998 6787776 48999999999999 5774 4589999999999999 56753 3577778
Q ss_pred EccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEecccccccccccc------------------
Q 005001 159 NVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVF------------------ 220 (720)
Q Consensus 159 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~------------------ 220 (720)
+|++|.|+. +|.. +++|+.|+|++|+|+ .+|.. +++|+.|+|++|+|++.....
T Consensus 268 ~Ls~N~L~~-Lp~l---p~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~~Lp~lp~~L~~L~Ls~N~L~~LP~ 339 (788)
T PRK15387 268 SIFSNPLTH-LPAL---PSGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPT 339 (788)
T ss_pred eccCCchhh-hhhc---hhhcCEEECcCCccc-ccccc---ccccceeECCCCccccCCCCcccccccccccCccccccc
Confidence 888777763 3332 234555666666665 34432 245566666666655422110
Q ss_pred CCCCcCeEEccCccCcccCcccccccceeeecCCcCCC
Q 005001 221 SGLPLTTLNVANNHFSGWIPRELISIRTFIYDGNSFDN 258 (720)
Q Consensus 221 ~~~~L~~l~l~~N~l~g~ip~~l~~l~~l~l~~n~~~~ 258 (720)
...+|+.|+|++|+|+ .+|....+++.|.+.+|.+..
T Consensus 340 lp~~Lq~LdLS~N~Ls-~LP~lp~~L~~L~Ls~N~L~~ 376 (788)
T PRK15387 340 LPSGLQELSVSDNQLA-SLPTLPSELYKLWAYNNRLTS 376 (788)
T ss_pred cccccceEecCCCccC-CCCCCCcccceehhhcccccc
Confidence 0123555666666665 344444455555555555554
No 450
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.41 E-value=4.6e-15 Score=149.28 Aligned_cols=168 Identities=25% Similarity=0.340 Sum_probs=111.7
Q ss_pred EEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEEccccc
Q 005001 87 SIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNS 164 (720)
Q Consensus 87 ~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~ 164 (720)
.++++.|.+. ++++.++.+..|..|+..+|+++ +.|..+. .+|..|++.+|++.. .|+..-+++.|++||..+|.
T Consensus 118 ~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~-l~~~~i~m~~L~~ld~~~N~ 194 (565)
T KOG0472|consen 118 KLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKA-LPENHIAMKRLKHLDCNSNL 194 (565)
T ss_pred hhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhh-CCHHHHHHHHHHhcccchhh
Confidence 3444444443 34555555555666666666655 4444443 456666666666663 33333337777777777777
Q ss_pred cccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEecccccccccccc--CCCCcCeEEccCccCcccCccc
Q 005001 165 LTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVF--SGLPLTTLNVANNHFSGWIPRE 242 (720)
Q Consensus 165 l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~g~ip~~ 242 (720)
++ .+|+.++.|.+|.-|||..|++. .+| +|.+++.|++|+++.|+|.-..... ...++..|||.+|+++ +.|++
T Consensus 195 L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde 270 (565)
T KOG0472|consen 195 LE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDE 270 (565)
T ss_pred hh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchH
Confidence 75 67777777777777888888777 667 6777777788888887776543222 2234889999999999 88987
Q ss_pred cc---ccceeeecCCcCCCCCC
Q 005001 243 LI---SIRTFIYDGNSFDNGPA 261 (720)
Q Consensus 243 l~---~l~~l~l~~n~~~~~~~ 261 (720)
++ ++..|++++|.+...|.
T Consensus 271 ~clLrsL~rLDlSNN~is~Lp~ 292 (565)
T KOG0472|consen 271 ICLLRSLERLDLSNNDISSLPY 292 (565)
T ss_pred HHHhhhhhhhcccCCccccCCc
Confidence 75 46678899998886654
No 451
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.39 E-value=2e-12 Score=141.19 Aligned_cols=144 Identities=22% Similarity=0.295 Sum_probs=100.0
Q ss_pred cceeccCCCcEEEEEEEcCCcEEEEEEccccccChH--------------------------------------HHHHHH
Q 005001 415 EFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQ--------------------------------------EEDNFL 456 (720)
Q Consensus 415 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~--------------------------------------~~~~~~ 456 (720)
.+.||.|++|.||+|++++|+.||||+.+......- .+-.|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 467999999999999999999999999865321100 011244
Q ss_pred HHHHHhhcC----C-CCCccccceEEeecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHH-HHHHHHh
Q 005001 457 EAVSNMSRL----R-HPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR-ALEYLHE 530 (720)
Q Consensus 457 ~e~~~l~~l----~-h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~-~L~~LH~ 530 (720)
+|...+.++ + +++|.-..-+.......++||||++|++|.++..... ... ....++.+++. .+..+|.
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~---~~~---~~~~ia~~~~~~~l~ql~~ 275 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE---AGL---DRKALAENLARSFLNQVLR 275 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh---cCC---CHHHHHHHHHHHHHHHHHh
Confidence 455544444 2 3443222222223445799999999999988765211 112 23456666655 4788898
Q ss_pred cCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 531 VCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 531 ~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
. |++|+|++|.||+++.++.++++|||++.....
T Consensus 276 ~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 276 D---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred C---CceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 8 999999999999999999999999999876643
No 452
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.38 E-value=5.5e-13 Score=142.99 Aligned_cols=252 Identities=21% Similarity=0.244 Sum_probs=184.8
Q ss_pred hcCCCccceecc--CCCcEEEEEEE---cCCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCe
Q 005001 409 TNSFSQEFLIGE--GSLGRVYRAEF---ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQ 482 (720)
Q Consensus 409 ~~~y~~~~~lG~--G~fg~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 482 (720)
...|.....+|. |.+|.||.+.. .++..+|+|+-+...........-++|+....++ .|+|.++.+..+...+.
T Consensus 113 ~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~ 192 (524)
T KOG0601|consen 113 DQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGI 192 (524)
T ss_pred hhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCc
Confidence 345666778999 99999999965 4688899998654444444445556677766666 59999999999999999
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHH----HHHHHHhcCCCCcEEecCCCCCEEeCCC-CceEEc
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR----ALEYLHEVCLPSVVHRNFKSANILLDDE-LNPHLS 557 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~----~L~~LH~~~~~~iiH~Dlkp~NIll~~~-~~~kl~ 557 (720)
.++-+|++. .+|.++.+ ....-++...+.....+... ||.++|+. .++|-|+||.||+...+ ...+++
T Consensus 193 lfiqtE~~~-~sl~~~~~---~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~ 265 (524)
T KOG0601|consen 193 LFIQTELCG-ESLQSYCH---TPCNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLT 265 (524)
T ss_pred ceeeecccc-chhHHhhh---cccccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecC
Confidence 999999986 57777765 22334677777888888888 99999999 99999999999999999 889999
Q ss_pred ccCCCccCCCCCcccc----ccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcc
Q 005001 558 DCGLAALTPNTERQVS----TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATP 633 (720)
Q Consensus 558 Dfg~a~~~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~ 633 (720)
|||+...+....-... ....|...|++||...+ -++.+.|+|++|.++.+-.++..+........
T Consensus 266 df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~---------- 334 (524)
T KOG0601|consen 266 DFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNSS---------- 334 (524)
T ss_pred CcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCCC----------
Confidence 9999887655432111 12257778999997655 56889999999999999999887765431110
Q ss_pred ccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 634 QLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
| ...+.+. +...+......++...+..|++.+|..|++.+.+...
T Consensus 335 -W---~~~r~~~---ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 335 -W---SQLRQGY---IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred -c---ccccccc---CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 1 1111111 1112222334456669999999999999998887654
No 453
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.34 E-value=3.4e-14 Score=149.10 Aligned_cols=169 Identities=30% Similarity=0.430 Sum_probs=145.3
Q ss_pred EEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEEccc
Q 005001 85 VVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (720)
Q Consensus 85 v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 162 (720)
.+.+||+.|++. ++|.....+-.|+.|.|+.|.|. .||..+. ..|++|||+.|+++ .+|..++.|+ |+.|-+++
T Consensus 77 t~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sN 152 (722)
T KOG0532|consen 77 TVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSN 152 (722)
T ss_pred hhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEec
Confidence 456788888886 67888888888999999999988 7777665 78999999999999 7888888886 89999999
Q ss_pred cccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCCCCcCeEEccCccCcccCccc
Q 005001 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPRE 242 (720)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~g~ip~~ 242 (720)
|+++ .+|+.++.+..|..||.+.|++. .+|..++++.+|..|.+..|++...++....++|..||+++|+++ .||-+
T Consensus 153 Nkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~~lp~El~~LpLi~lDfScNkis-~iPv~ 229 (722)
T KOG0532|consen 153 NKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLEDLPEELCSLPLIRLDFSCNKIS-YLPVD 229 (722)
T ss_pred Cccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhhhCCHHHhCCceeeeecccCcee-ecchh
Confidence 9998 77888888899999999999998 788889999999999999999998887777888999999999999 89987
Q ss_pred cc---ccceeeecCCcCCCCC
Q 005001 243 LI---SIRTFIYDGNSFDNGP 260 (720)
Q Consensus 243 l~---~l~~l~l~~n~~~~~~ 260 (720)
|. .|+.|.|.+||+...|
T Consensus 230 fr~m~~Lq~l~LenNPLqSPP 250 (722)
T KOG0532|consen 230 FRKMRHLQVLQLENNPLQSPP 250 (722)
T ss_pred hhhhhhheeeeeccCCCCCCh
Confidence 75 4667889999987543
No 454
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.28 E-value=3.7e-12 Score=140.39 Aligned_cols=149 Identities=15% Similarity=0.181 Sum_probs=94.3
Q ss_pred HhcCCCccceeccCCCcEEEEEEEcC-CcEEEEEEccccccCh--------------------------------HHHH-
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSL--------------------------------QEED- 453 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~--------------------------------~~~~- 453 (720)
.-..|+. +.||+|++|.||+|.+++ |+.||||+.+...... +..+
T Consensus 118 ~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~ 196 (537)
T PRK04750 118 WFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKT 196 (537)
T ss_pred HHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHH
Confidence 3445666 789999999999999987 9999999997542100 0111
Q ss_pred -----HHHHHHHHhhcC----CCCCccccceEEee-cCeEEEEEEecCCCCHHHHhhhccC--CCCCCCHHHHHHHHHHH
Q 005001 454 -----NFLEAVSNMSRL----RHPNIVTLAGYCAE-HGQRLLVYEYVGNGNLHDMLHFADD--SSKNLTWNARVRVALGT 521 (720)
Q Consensus 454 -----~~~~e~~~l~~l----~h~niv~l~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~--~~~~~~~~~~~~i~~qi 521 (720)
++.+|+..+.++ .+.+.+.+=..+.+ ....++||||++|+.+.++-..... ....+....+..++.|
T Consensus 197 l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q- 275 (537)
T PRK04750 197 LHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ- 275 (537)
T ss_pred HHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH-
Confidence 233444433333 23333333233322 3456899999999999875321110 0011222233333333
Q ss_pred HHHHHHHHhcCCCCcEEecCCCCCEEeCCCC----ceEEcccCCCccCCC
Q 005001 522 ARALEYLHEVCLPSVVHRNFKSANILLDDEL----NPHLSDCGLAALTPN 567 (720)
Q Consensus 522 ~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~----~~kl~Dfg~a~~~~~ 567 (720)
+... |++|+|++|.||+++.++ +++++|||++.....
T Consensus 276 ------if~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 276 ------VFRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred ------HHhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 3445 999999999999999988 999999999976654
No 455
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.26 E-value=4.6e-13 Score=148.17 Aligned_cols=170 Identities=25% Similarity=0.320 Sum_probs=140.2
Q ss_pred EEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCC----------------------------CCccceecc
Q 005001 85 VVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQL----------------------------PPNLTSLNL 136 (720)
Q Consensus 85 v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~----------------------------~~~L~~L~L 136 (720)
++.|++..|.++ .+|+.+..++.|++|||..|+|. ..|..+ .+.|+.|+|
T Consensus 289 L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~Lyl 366 (1081)
T KOG0618|consen 289 LVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYL 366 (1081)
T ss_pred HHHHHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHH
Confidence 445566667775 56777777888888888888876 444221 146888999
Q ss_pred ccccCcCCCCccccccCCccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEecccccccc
Q 005001 137 ASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGS 216 (720)
Q Consensus 137 ~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~ 216 (720)
.+|.|+...-+.+.+..+|+.|+|++|+|.......+.++..|+.|+||+|+|+ .+|..+.+++.|++|...+|+|...
T Consensus 367 anN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~~f 445 (1081)
T KOG0618|consen 367 ANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLLSF 445 (1081)
T ss_pred hcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCceeec
Confidence 999999888888999999999999999998666668899999999999999999 8999999999999999999999987
Q ss_pred ccccCCCCcCeEEccCccCc-ccCcccc--cccceeeecCCcCC
Q 005001 217 LNVFSGLPLTTLNVANNHFS-GWIPREL--ISIRTFIYDGNSFD 257 (720)
Q Consensus 217 ~~~~~~~~L~~l~l~~N~l~-g~ip~~l--~~l~~l~l~~n~~~ 257 (720)
+.......|+.+||+.|+|+ +.+|..+ .+|+.|++.||...
T Consensus 446 Pe~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l 489 (1081)
T KOG0618|consen 446 PELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRL 489 (1081)
T ss_pred hhhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCccc
Confidence 75555666999999999996 3566554 58999999999953
No 456
>PLN03150 hypothetical protein; Provisional
Probab=99.26 E-value=5.5e-12 Score=144.06 Aligned_cols=107 Identities=26% Similarity=0.329 Sum_probs=83.2
Q ss_pred CccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEecccccccccccc-C-CCCcCeEEcc
Q 005001 154 SLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVF-S-GLPLTTLNVA 231 (720)
Q Consensus 154 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~-~~~L~~l~l~ 231 (720)
.++.|+|++|.|+|.+|..++.|++|+.|+|++|+|+|.+|..++.+++|+.|+|++|+|+|.+|.. . ..+|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 3677888888888888888888888888888888888888888888888888888888888876643 2 2358888888
Q ss_pred CccCcccCcccccc----cceeeecCCcCCCCC
Q 005001 232 NNHFSGWIPRELIS----IRTFIYDGNSFDNGP 260 (720)
Q Consensus 232 ~N~l~g~ip~~l~~----l~~l~l~~n~~~~~~ 260 (720)
+|+|+|.+|..+.. +..+.+.+|+..|+.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~ 531 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGI 531 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCC
Confidence 88888888887653 456888999888864
No 457
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.26 E-value=4.6e-12 Score=136.01 Aligned_cols=252 Identities=18% Similarity=0.177 Sum_probs=183.8
Q ss_pred HHHhcCCCccceeccCCCcEEEEEEE--cCCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCe
Q 005001 406 QTATNSFSQEFLIGEGSLGRVYRAEF--ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQ 482 (720)
Q Consensus 406 ~~~~~~y~~~~~lG~G~fg~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 482 (720)
.....+|..+..||.|.|+.|+.... .++..|++|...+..........-+.|+.+...+ .|.+++..+..+....+
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~ 340 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQ 340 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccc
Confidence 33456788899999999999999853 4678899998877665544444445666666655 68999998888888888
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCC-CceEEcccCC
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE-LNPHLSDCGL 561 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~-~~~kl~Dfg~ 561 (720)
.|+-.||++++++...+. ....+++...+++..|++.++.++|+. .++|+|+||+||++..+ +..++.|||.
T Consensus 341 ~~ip~e~~~~~s~~l~~~----~~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~ 413 (524)
T KOG0601|consen 341 GYIPLEFCEGGSSSLRSV----TSQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGC 413 (524)
T ss_pred ccCchhhhcCcchhhhhH----HHHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhcccccc
Confidence 889999999999877663 356788888999999999999999998 99999999999999886 7789999998
Q ss_pred CccCCCCCcccccccccccccc--CccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHH
Q 005001 562 AALTPNTERQVSTQMVGAFGYS--APEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDID 639 (720)
Q Consensus 562 a~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 639 (720)
+..+.-.. ....++-++. +++......+..+.|++|||.-+.|..+|..--......
T Consensus 414 ~t~~~~~~----~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~----------------- 472 (524)
T KOG0601|consen 414 WTRLAFSS----GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQS----------------- 472 (524)
T ss_pred ccccceec----ccccccccccccchhhccccccccccccccccccccccccCcccCcccccc-----------------
Confidence 86421111 1112223344 555556677889999999999999999877533221110
Q ss_pred HHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 005001 640 ALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRL 689 (720)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~ 689 (720)
..+. .......+. ....+..+.+.+...|+..||.+.++....+..
T Consensus 473 --~~i~-~~~~p~~~~-~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 473 --LTIR-SGDTPNLPG-LKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred --eeee-cccccCCCc-hHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 0000 010111122 226778899999999999999999988765443
No 458
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.24 E-value=4e-11 Score=146.94 Aligned_cols=80 Identities=19% Similarity=0.119 Sum_probs=41.1
Q ss_pred CCCeeecCCCcccCCCCccccCCCCCCeeEecccccccccccc-CCCCcCeEEccCccCcccCcccccccceeeecCCcC
Q 005001 178 GLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVF-SGLPLTTLNVANNHFSGWIPRELISIRTFIYDGNSF 256 (720)
Q Consensus 178 ~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~l~l~~N~l~g~ip~~l~~l~~l~l~~n~~ 256 (720)
+|+.|+|++|...+.+|.+++++++|+.|+|++|..-+.+|.. ...+|+.|+|++|..-..+|....+++.|++.+|.+
T Consensus 779 sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~~L~sL~~L~Ls~c~~L~~~p~~~~nL~~L~Ls~n~i 858 (1153)
T PLN03210 779 SLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGINLESLESLDLSGCSRLRTFPDISTNISDLNLSRTGI 858 (1153)
T ss_pred cchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCCCccccCEEECCCCCccccccccccccCEeECCCCCC
Confidence 4555555555555556666666666666666665433333322 222355555555444334444444555555555544
Q ss_pred C
Q 005001 257 D 257 (720)
Q Consensus 257 ~ 257 (720)
.
T Consensus 859 ~ 859 (1153)
T PLN03210 859 E 859 (1153)
T ss_pred c
Confidence 4
No 459
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.24 E-value=1e-10 Score=126.64 Aligned_cols=167 Identities=22% Similarity=0.261 Sum_probs=126.3
Q ss_pred EEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecCCCCHHHHhhhccCCCCCC
Q 005001 430 EFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNL 509 (720)
Q Consensus 430 ~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~ 509 (720)
...++.+|.|...+.... .......+.++.++.++||||+++++.++..+..|+|+|-+. .|..+++. +
T Consensus 33 ~k~~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~-------l 101 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE-------L 101 (690)
T ss_pred eeccCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH-------h
Confidence 344677787777764432 334456677888999999999999999999999999999986 56666652 2
Q ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccccccccccccccCccccc
Q 005001 510 TWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFAL 589 (720)
Q Consensus 510 ~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~ 589 (720)
........+.||+.||.+||..+ +++|++|....|+++..|+.||++|.++........ ......--..|..|+.+.
T Consensus 102 ~~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~~ 178 (690)
T KOG1243|consen 102 GKEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEID 178 (690)
T ss_pred HHHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhcC
Confidence 25666778899999999999776 999999999999999999999999998754433221 111112223467777655
Q ss_pred cCCCcccchhhhHHHHHHHHHhC
Q 005001 590 SGIYTVKSDVYSFGVVMLELLTG 612 (720)
Q Consensus 590 ~~~~~~~~DvwSlGv~l~elltg 612 (720)
... -..|.|-|||+++|++.|
T Consensus 179 ~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 179 PSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred ccc--cchhhhhHHHHHHHHhCc
Confidence 443 457999999999999998
No 460
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.24 E-value=2.7e-11 Score=115.42 Aligned_cols=131 Identities=21% Similarity=0.129 Sum_probs=94.4
Q ss_pred cceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCcc-ccceEEeecCeEEEEEEecCCC
Q 005001 415 EFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV-TLAGYCAEHGQRLLVYEYVGNG 493 (720)
Q Consensus 415 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~l~~~~~~~~~~~lV~e~~~~g 493 (720)
.+.|+.|.++.||+++.. ++.|++|....... ....+.+|+..++.+.+.+++ +++.+. .+..++||||++|.
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~ 76 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE---LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGS 76 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc---cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCC
Confidence 356889999999999875 77899998765431 123456777777777555544 444433 33458999999998
Q ss_pred CHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCcEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 494 NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC--LPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 494 sL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
++.+.- .....++.+++++|+.||+.. ..+++|+|++|.||+++ ++.++++|||.+..
T Consensus 77 ~l~~~~------------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 77 ELLTED------------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cccccc------------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 775420 111345678999999999982 11259999999999999 66899999998753
No 461
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.23 E-value=1.7e-12 Score=137.33 Aligned_cols=178 Identities=26% Similarity=0.418 Sum_probs=133.2
Q ss_pred CCCEEEEEcCCCCCcccccccccCCCC---CCEEEccCCCCCCC----CCC---CCCCccceeccccccCcCC----CCc
Q 005001 82 GSAVVSIDISGLGLSGTMGYLLSDLLS---LRKFDLSGNSIHDT----IPY---QLPPNLTSLNLASNNFSGN----LPY 147 (720)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~l~~l~~---L~~L~L~~N~l~~~----~p~---~~~~~L~~L~L~~N~l~g~----~p~ 147 (720)
..+++.|+|++|.+.+..+..+..+.. |++|++++|++++. +.. ...++|+.|+|++|.+++. ++.
T Consensus 80 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~ 159 (319)
T cd00116 80 GCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAK 159 (319)
T ss_pred cCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHH
Confidence 348999999999998877777776666 99999999998831 111 1126899999999999953 344
Q ss_pred cccccCCccEEEccccccccc----cccccCCCCCCCeeecCCCcccCC----CCccccCCCCCCeeEecccccccc-c-
Q 005001 148 SIASMVSLSYLNVSRNSLTQS----IGDIFGNLAGLATLDLSFNNFSGD----LPNSFISLSNISSLYLQNNQVTGS-L- 217 (720)
Q Consensus 148 ~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~-~- 217 (720)
.+..+++|+.|+|++|.+++. ++..+..+++|+.|+|++|.+++. +...+..+++|++|++++|.+++. +
T Consensus 160 ~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~ 239 (319)
T cd00116 160 ALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAA 239 (319)
T ss_pred HHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHH
Confidence 567788999999999999853 345566778999999999998743 334566788999999999999862 1
Q ss_pred cc---c--CCCCcCeEEccCccCc--c--cCcc---cccccceeeecCCcCCCC
Q 005001 218 NV---F--SGLPLTTLNVANNHFS--G--WIPR---ELISIRTFIYDGNSFDNG 259 (720)
Q Consensus 218 ~~---~--~~~~L~~l~l~~N~l~--g--~ip~---~l~~l~~l~l~~n~~~~~ 259 (720)
.. + ....|+.|++++|.++ | .+.. .+.+++.+++++|.+...
T Consensus 240 ~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~ 293 (319)
T cd00116 240 ALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEE 293 (319)
T ss_pred HHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHH
Confidence 11 1 1246999999999997 2 2222 335788899999988643
No 462
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.22 E-value=7.7e-11 Score=112.99 Aligned_cols=137 Identities=16% Similarity=0.184 Sum_probs=97.6
Q ss_pred ceeccCCCcEEEEEEEcC-------CcEEEEEEcccccc--------------------ChHHHHHH----HHHHHHhhc
Q 005001 416 FLIGEGSLGRVYRAEFAN-------GKIMAVKKIDNAAL--------------------SLQEEDNF----LEAVSNMSR 464 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~~-------~~~vavK~~~~~~~--------------------~~~~~~~~----~~e~~~l~~ 464 (720)
..||.|--+.||.|...+ +..+|+|..+.... .......+ .+|++.|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999996543 47899998742211 00112222 278888888
Q ss_pred CCC--CCccccceEEeecCeEEEEEEecCCCCHHH-HhhhccCCCCCCCHHHHHHHHHHHHHHHHHH-HhcCCCCcEEec
Q 005001 465 LRH--PNIVTLAGYCAEHGQRLLVYEYVGNGNLHD-MLHFADDSSKNLTWNARVRVALGTARALEYL-HEVCLPSVVHRN 540 (720)
Q Consensus 465 l~h--~niv~l~~~~~~~~~~~lV~e~~~~gsL~~-~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~L-H~~~~~~iiH~D 540 (720)
+.. -++..++++ ...++||||+.++.+.. .++ ...++..+...+..+++.+|..+ |+. ++||+|
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk-----d~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGD 150 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK-----DAKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHAD 150 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh-----ccccCHHHHHHHHHHHHHHHHHHHHhC---CeecCC
Confidence 843 456666654 45789999997754422 222 12345556777889999999999 787 999999
Q ss_pred CCCCCEEeCCCCceEEcccCCCccC
Q 005001 541 FKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 541 lkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
|++.||++++ +.++|+|||.+-..
T Consensus 151 Ls~~NIL~~~-~~v~iIDF~qav~~ 174 (197)
T cd05146 151 LSEYNMLWHD-GKVWFIDVSQSVEP 174 (197)
T ss_pred CCHHHEEEEC-CcEEEEECCCceeC
Confidence 9999999974 68999999988654
No 463
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.18 E-value=1.3e-10 Score=142.53 Aligned_cols=173 Identities=17% Similarity=0.204 Sum_probs=121.6
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC-C---------------------ccceeccccccC
Q 005001 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP-P---------------------NLTSLNLASNNF 141 (720)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~-~---------------------~L~~L~L~~N~l 141 (720)
+++.|+|++|..-..+|..+++|++|+.|+|++|..-+.+|..+. + +|++|+|++|.+
T Consensus 658 ~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i~l~sL~~L~Lsgc~~L~~~p~~~~nL~~L~L~~n~i 737 (1153)
T PLN03210 658 NLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAI 737 (1153)
T ss_pred cccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcCCCCCCCEEeCCCCCCccccccccCCcCeeecCCCcc
Confidence 456666766665566777777778888888877654445664431 3 445555555555
Q ss_pred cCCCCccc------------------------------cccCCccEEEccccccccccccccCCCCCCCeeecCCCcccC
Q 005001 142 SGNLPYSI------------------------------ASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSG 191 (720)
Q Consensus 142 ~g~~p~~~------------------------------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 191 (720)
. .+|..+ ...++|+.|+|++|...+.+|.+++++++|+.|+|++|..-+
T Consensus 738 ~-~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~ 816 (1153)
T PLN03210 738 E-EFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLE 816 (1153)
T ss_pred c-cccccccccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcC
Confidence 4 344321 012467888888888888899999999999999999976555
Q ss_pred CCCccccCCCCCCeeEeccccccccccccCCCCcCeEEccCccCcccCcccc---cccceeeecC-CcCCCCC
Q 005001 192 DLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPREL---ISIRTFIYDG-NSFDNGP 260 (720)
Q Consensus 192 ~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~g~ip~~l---~~l~~l~l~~-n~~~~~~ 260 (720)
.+|..+ ++++|+.|+|++|..-..+|.. ..+|+.|+|++|.|+ .+|.++ .+|+.|++.+ |.+...+
T Consensus 817 ~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~-~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~ 886 (1153)
T PLN03210 817 TLPTGI-NLESLESLDLSGCSRLRTFPDI-STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVS 886 (1153)
T ss_pred eeCCCC-CccccCEEECCCCCcccccccc-ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccC
Confidence 888776 7899999999998655444432 246999999999998 688654 5677888887 4454433
No 464
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.18 E-value=4e-12 Score=134.49 Aligned_cols=175 Identities=22% Similarity=0.221 Sum_probs=125.4
Q ss_pred CCEEEEEcCCCCCc------ccccccccCCCCCCEEEccCCCCCCCCCCCCC-----CccceeccccccCcC----CCCc
Q 005001 83 SAVVSIDISGLGLS------GTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP-----PNLTSLNLASNNFSG----NLPY 147 (720)
Q Consensus 83 ~~v~~l~l~~~~l~------g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~-----~~L~~L~L~~N~l~g----~~p~ 147 (720)
..++.|+++++.+. ..++..+.++++|+.|+|++|.+.+..+..+. ++|+.|+|++|++++ .+..
T Consensus 51 ~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~ 130 (319)
T cd00116 51 PSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAK 130 (319)
T ss_pred CCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHH
Confidence 34778888887776 23455677888999999999998765543332 349999999999883 3344
Q ss_pred ccccc-CCccEEEccccccccc----cccccCCCCCCCeeecCCCcccCC----CCccccCCCCCCeeEeccccccccc-
Q 005001 148 SIASM-VSLSYLNVSRNSLTQS----IGDIFGNLAGLATLDLSFNNFSGD----LPNSFISLSNISSLYLQNNQVTGSL- 217 (720)
Q Consensus 148 ~~~~l-~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~~- 217 (720)
.+..+ ++|+.|+|++|.+++. ++..+..+++|+.|+|++|++++. ++..+..+++|++|+|++|.+++..
T Consensus 131 ~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~ 210 (319)
T cd00116 131 GLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGA 210 (319)
T ss_pred HHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHH
Confidence 56677 8899999999999843 344667778899999999998852 3344556679999999999987532
Q ss_pred ---c-cc-CCCCcCeEEccCccCcccCcc----c----ccccceeeecCCcCC
Q 005001 218 ---N-VF-SGLPLTTLNVANNHFSGWIPR----E----LISIRTFIYDGNSFD 257 (720)
Q Consensus 218 ---~-~~-~~~~L~~l~l~~N~l~g~ip~----~----l~~l~~l~l~~n~~~ 257 (720)
. .+ ...+|+.|++++|.+++..+. . ...|+.|++.+|.+.
T Consensus 211 ~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~ 263 (319)
T cd00116 211 SALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDIT 263 (319)
T ss_pred HHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCC
Confidence 1 11 224599999999998863222 2 257888888888764
No 465
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.15 E-value=4.4e-10 Score=103.71 Aligned_cols=133 Identities=22% Similarity=0.293 Sum_probs=101.5
Q ss_pred eeccCCCcEEEEEEEcCCcEEEEEEcccc-ccChHH-----HHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEec
Q 005001 417 LIGEGSLGRVYRAEFANGKIMAVKKIDNA-ALSLQE-----EDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYV 490 (720)
Q Consensus 417 ~lG~G~fg~Vy~~~~~~~~~vavK~~~~~-~~~~~~-----~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 490 (720)
.+++|+-+.+|.+.+.+.. +++|.-..+ ...++- ...-.+|+.++.+++--.|....=+..+.+...|+|||+
T Consensus 3 ~i~~GAEa~i~~~~~~g~~-av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFLGLP-AVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeeccCcc-eEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 5789999999999775434 555544322 222222 234567899998887767776666777888889999999
Q ss_pred CCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
+|..|.+.+... ...++..+-.-+.-||.. +|||+||.++||++..++ +.++|||++...
T Consensus 82 ~G~~lkd~l~~~-----------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 82 EGELLKDALEEA-----------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred CChhHHHHHHhc-----------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCccccc
Confidence 999999888621 245667777788899999 999999999999998875 999999998743
No 466
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.14 E-value=1.8e-12 Score=143.52 Aligned_cols=173 Identities=21% Similarity=0.288 Sum_probs=114.1
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEEcc
Q 005001 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (720)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~ 161 (720)
.++.++++.|++++.. ..++.+.+|+.|+..+|+|+ .+|..+. .+|+.|++.+|.++ -+|..++.++.|+.|+|.
T Consensus 242 nl~~~dis~n~l~~lp-~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~ 318 (1081)
T KOG0618|consen 242 NLQYLDISHNNLSNLP-EWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQ 318 (1081)
T ss_pred cceeeecchhhhhcch-HHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeeh
Confidence 4666788888888644 88889999999999999996 6776665 67788888888877 677777778888888888
Q ss_pred ccccccccccccC-------------------------CCCCCCeeecCCCcccCCCCccccCCCCCCeeEecccccccc
Q 005001 162 RNSLTQSIGDIFG-------------------------NLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGS 216 (720)
Q Consensus 162 ~N~l~~~~p~~~~-------------------------~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~ 216 (720)
.|+|....+..+. .+..|+.|+|.+|+|+...-..+-+.++|+.|+|++|+|...
T Consensus 319 ~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~f 398 (1081)
T KOG0618|consen 319 SNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSF 398 (1081)
T ss_pred hccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccC
Confidence 8877633221111 123466777777777766555667777777777777777654
Q ss_pred cccc-CCC-CcCeEEccCccCcccCcccc---cccceeeecCCcCCCCC
Q 005001 217 LNVF-SGL-PLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDNGP 260 (720)
Q Consensus 217 ~~~~-~~~-~L~~l~l~~N~l~g~ip~~l---~~l~~l~l~~n~~~~~~ 260 (720)
+... ... .|+.|+||+|+|+ .+|..+ ..|.+|...+|.+.+.|
T Consensus 399 pas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~~fP 446 (1081)
T KOG0618|consen 399 PASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLLSFP 446 (1081)
T ss_pred CHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCceeech
Confidence 4322 112 2677777777776 555433 23344444444444433
No 467
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.08 E-value=7.3e-10 Score=110.48 Aligned_cols=143 Identities=22% Similarity=0.286 Sum_probs=109.3
Q ss_pred ceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCC--CCccccceEEeec---CeEEEEEEec
Q 005001 416 FLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH--PNIVTLAGYCAEH---GQRLLVYEYV 490 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~---~~~~lV~e~~ 490 (720)
+.|+.|.++.||++...+|+.+++|........ .....+.+|+++++.+.+ .++.+++.+.... +..++||||+
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 468999999999998877789999998654321 234567888888888865 3456677766553 3668999999
Q ss_pred CCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 005001 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC-------------------------------------- 532 (720)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-------------------------------------- 532 (720)
+|.++.+.+. ...++..+...++.+++++|.+||+..
T Consensus 83 ~G~~l~~~~~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 83 DGRVLRDRLL-----RPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred CCEecCCCCC-----CCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 9988876542 145677778888888888888888531
Q ss_pred ---------------CCCcEEecCCCCCEEeCC--CCceEEcccCCCcc
Q 005001 533 ---------------LPSVVHRNFKSANILLDD--ELNPHLSDCGLAAL 564 (720)
Q Consensus 533 ---------------~~~iiH~Dlkp~NIll~~--~~~~kl~Dfg~a~~ 564 (720)
...++|+|+.+.||+++. ++.+.|+||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 135799999999999998 66789999998764
No 468
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.07 E-value=1.7e-09 Score=99.18 Aligned_cols=145 Identities=18% Similarity=0.225 Sum_probs=107.0
Q ss_pred ccceeccCCCcEEEEEEEcCCcEEEEEEcc-ccccCh-----HHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 414 QEFLIGEGSLGRVYRAEFANGKIMAVKKID-NAALSL-----QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 414 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~-~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
....+-+|+-+.|+++.+. |+...||.-. +....+ -..++.++|++.+.++.--.|.-..-++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 4567899999999999886 6666666442 222222 22456678999998887667766666777777788999
Q ss_pred EecCC-CCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCC---ceEEcccCCCc
Q 005001 488 EYVGN-GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL---NPHLSDCGLAA 563 (720)
Q Consensus 488 e~~~~-gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~---~~kl~Dfg~a~ 563 (720)
||++| .++.+++.... ...........++..|-+.+.-||.. +|||+||..+||++..++ .+.++|||++.
T Consensus 90 E~~~g~~~vk~~i~~~~--~~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTM--EDESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred EeccchhHHHHHHHHHc--cCcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchh
Confidence 99976 47888886432 22222333367888899999999999 999999999999997654 35899999985
Q ss_pred c
Q 005001 564 L 564 (720)
Q Consensus 564 ~ 564 (720)
.
T Consensus 165 ~ 165 (229)
T KOG3087|consen 165 V 165 (229)
T ss_pred c
Confidence 4
No 469
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.07 E-value=4.4e-11 Score=134.73 Aligned_cols=248 Identities=22% Similarity=0.253 Sum_probs=168.6
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccc-cChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAA-LSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
..+.+.+-+.+|.++.++.+.-. .|...+.|...... +.....+....+-.+.-...+|.++...--+......++|+
T Consensus 804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~ 883 (1205)
T KOG0606|consen 804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVG 883 (1205)
T ss_pred ccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhh
Confidence 44555667888999999887433 23333333332111 01111222223333333335577776655555677889999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
+|..+++|...++. .+..+.+-+...+..+..+++|||.. .+.|||++|.|++...++..++.|||.......
T Consensus 884 ~~~~~~~~~Skl~~----~~~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~ 956 (1205)
T KOG0606|consen 884 HYLNGGDLPSKLHN----SGCLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGL 956 (1205)
T ss_pred HHhccCCchhhhhc----CCCcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCcccccccccc
Confidence 99999999999983 34566666677777888999999998 799999999999999999999999984321110
Q ss_pred C---C-------------------------c--cccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCC
Q 005001 568 T---E-------------------------R--QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (720)
Q Consensus 568 ~---~-------------------------~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~ 617 (720)
. . + .......||+.|.+||...+......+|+|++|++++|.++|..||.
T Consensus 957 ~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~n 1036 (1205)
T KOG0606|consen 957 IPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFN 1036 (1205)
T ss_pred ccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCC
Confidence 0 0 0 01123469999999999999999999999999999999999999998
Q ss_pred CCCCcchhhHHHhhccccccHHHHHhhcccccCC-CCChhHHHHHHHHHHHhcCCCCCCCCCHH
Q 005001 618 SSRPRSEQSLVRWATPQLHDIDALAKMVDPALNG-MYPAKSLSRFADIIALCVQPEPEFRPPMS 680 (720)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 680 (720)
...+.... ..+......+ .-+........+++...+..+|.+|-.+.
T Consensus 1037 a~tpq~~f----------------~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1037 AETPQQIF----------------ENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred Ccchhhhh----------------hccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 76553221 1111111111 12334556677899999999999997766
No 470
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.07 E-value=4.5e-12 Score=133.42 Aligned_cols=153 Identities=26% Similarity=0.367 Sum_probs=130.6
Q ss_pred EEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC-CccceeccccccCcCCCCccccccCCccEEEcccc
Q 005001 85 VVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP-PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRN 163 (720)
Q Consensus 85 v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~-~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N 163 (720)
+..+.|..|.+. .+|..+++|..|++|||+.|+++ .+|..+. --|+.|-+++|+++ .+|..++.+..|..||.+.|
T Consensus 100 Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lpLkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~n 176 (722)
T KOG0532|consen 100 LESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLPLKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKN 176 (722)
T ss_pred HHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCcceeEEEecCccc-cCCcccccchhHHHhhhhhh
Confidence 555677778776 78899999999999999999998 7787776 57999999999999 88999999999999999999
Q ss_pred ccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCCC-CcCeEEccCccCcccCccc
Q 005001 164 SLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGL-PLTTLNVANNHFSGWIPRE 242 (720)
Q Consensus 164 ~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-~L~~l~l~~N~l~g~ip~~ 242 (720)
.+. .+|..++.+.+|+.|.+..|++. .+|..++.| .|..||+++|+|+-.+-.|..+ .|++|-|.+|.|. ..|..
T Consensus 177 ei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis~iPv~fr~m~~Lq~l~LenNPLq-SPPAq 252 (722)
T KOG0532|consen 177 EIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKISYLPVDFRKMRHLQVLQLENNPLQ-SPPAQ 252 (722)
T ss_pred hhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCceeecchhhhhhhhheeeeeccCCCC-CChHH
Confidence 998 67888999999999999999999 788888866 6899999999999765555554 4999999999998 45665
Q ss_pred cc
Q 005001 243 LI 244 (720)
Q Consensus 243 l~ 244 (720)
++
T Consensus 253 IC 254 (722)
T KOG0532|consen 253 IC 254 (722)
T ss_pred HH
Confidence 54
No 471
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.02 E-value=2.4e-10 Score=124.70 Aligned_cols=170 Identities=31% Similarity=0.472 Sum_probs=84.1
Q ss_pred EEEEEcCCCCCcccccccccCCC-CCCEEEccCCCCCCCC--CCCCCCccceeccccccCcCCCCccccccCCccEEEcc
Q 005001 85 VVSIDISGLGLSGTMGYLLSDLL-SLRKFDLSGNSIHDTI--PYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (720)
Q Consensus 85 v~~l~l~~~~l~g~~~~~l~~l~-~L~~L~L~~N~l~~~~--p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~ 161 (720)
++.|++.+|+++ .+++....++ +|+.|++++|.+. .+ |....++|+.|++++|+++ .+|...+.+++|+.|+++
T Consensus 118 l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls 194 (394)
T COG4886 118 LTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLS 194 (394)
T ss_pred eeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheecc
Confidence 444555555544 2333444442 5555555555554 22 2333355555555555555 444444455555555555
Q ss_pred ccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCC-CCcCeEEccCccCcccCc
Q 005001 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSG-LPLTTLNVANNHFSGWIP 240 (720)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~l~l~~N~l~g~ip 240 (720)
+|+++ .+|...+.+..|+.|.+++|++. .++..+.+++++..|.+++|++...+..... .+++.|++++|+++ .++
T Consensus 195 ~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~l~~l~~L~~s~n~i~-~i~ 271 (394)
T COG4886 195 GNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLEDLPESIGNLSNLETLDLSNNQIS-SIS 271 (394)
T ss_pred CCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeeeccchhccccccceecccccccc-ccc
Confidence 55554 33333333444555555555333 3444455555555555555555443222222 23777777777776 333
Q ss_pred c--cccccceeeecCCcCCCCC
Q 005001 241 R--ELISIRTFIYDGNSFDNGP 260 (720)
Q Consensus 241 ~--~l~~l~~l~l~~n~~~~~~ 260 (720)
. .+.+++.+++++|.+...+
T Consensus 272 ~~~~~~~l~~L~~s~n~~~~~~ 293 (394)
T COG4886 272 SLGSLTNLRELDLSGNSLSNAL 293 (394)
T ss_pred cccccCccCEEeccCccccccc
Confidence 2 3455666777777665443
No 472
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.98 E-value=4.4e-11 Score=116.52 Aligned_cols=127 Identities=24% Similarity=0.282 Sum_probs=92.0
Q ss_pred CccceeccccccCcCCCCccccccCCccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEe
Q 005001 129 PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYL 208 (720)
Q Consensus 129 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 208 (720)
+.|++||||+|.|+ .|.++..-+|+++.|++|+|.|.... .+..|++|+.||||+|.|+ .+-.+-..+-|+++|.|
T Consensus 284 q~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v~--nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~L 359 (490)
T KOG1259|consen 284 QELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTVQ--NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKL 359 (490)
T ss_pred hhhhhccccccchh-hhhhhhhhccceeEEeccccceeeeh--hhhhcccceEeecccchhH-hhhhhHhhhcCEeeeeh
Confidence 57888889988888 78888888888999999999887432 3778888899999999888 55555567788888899
Q ss_pred ccccccccccccCCCCcCeEEccCccCcccC-ccc---ccccceeeecCCcCCCC
Q 005001 209 QNNQVTGSLNVFSGLPLTTLNVANNHFSGWI-PRE---LISIRTFIYDGNSFDNG 259 (720)
Q Consensus 209 ~~N~l~~~~~~~~~~~L~~l~l~~N~l~g~i-p~~---l~~l~~l~l~~n~~~~~ 259 (720)
++|.|...-..-..-+|..||+++|+|...- -.. ++.|..+.+.+||+...
T Consensus 360 a~N~iE~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~ 414 (490)
T KOG1259|consen 360 AQNKIETLSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGS 414 (490)
T ss_pred hhhhHhhhhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcccc
Confidence 9888764322222235888899999885311 122 33455677888887654
No 473
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.97 E-value=3.1e-10 Score=106.62 Aligned_cols=82 Identities=32% Similarity=0.408 Sum_probs=19.9
Q ss_pred cCCccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCccc-cCCCCCCeeEecccccccc--c-cccCCCCcCe
Q 005001 152 MVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSF-ISLSNISSLYLQNNQVTGS--L-NVFSGLPLTT 227 (720)
Q Consensus 152 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~-~~l~~L~~L~l~~N~l~~~--~-~~~~~~~L~~ 227 (720)
+.+|+.|+|++|.|+... .+..++.|+.|+|++|+|+ .+...+ ..+++|++|+|++|+|... + +.....+|+.
T Consensus 41 l~~L~~L~Ls~N~I~~l~--~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~ 117 (175)
T PF14580_consen 41 LDKLEVLDLSNNQITKLE--GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRV 117 (175)
T ss_dssp -TT--EEE-TTS--S--T--T----TT--EEE--SS----S-CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--E
T ss_pred hcCCCEEECCCCCCcccc--CccChhhhhhcccCCCCCC-ccccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcce
Confidence 344444444444444221 2334444444444444444 232222 2344444444444444431 1 1112223555
Q ss_pred EEccCccCc
Q 005001 228 LNVANNHFS 236 (720)
Q Consensus 228 l~l~~N~l~ 236 (720)
|+|.+|.++
T Consensus 118 L~L~~NPv~ 126 (175)
T PF14580_consen 118 LSLEGNPVC 126 (175)
T ss_dssp EE-TT-GGG
T ss_pred eeccCCccc
Confidence 555555554
No 474
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.96 E-value=3e-10 Score=123.96 Aligned_cols=155 Identities=32% Similarity=0.428 Sum_probs=134.3
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCC--CCCccceeccccccCcCCCCccccccCCccEEEcc
Q 005001 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQ--LPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (720)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~--~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~ 161 (720)
+++.|++++|.+. .+|..+++++.|+.|++++|+++ .+|.. ..++|+.|++++|+++ .+|..++.+..|++|.++
T Consensus 141 nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~ 217 (394)
T COG4886 141 NLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLS 217 (394)
T ss_pred hcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhc
Confidence 6889999999997 45578999999999999999999 56655 4589999999999999 888888888889999999
Q ss_pred ccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCCCCcCeEEccCccCcccCcc
Q 005001 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPR 241 (720)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~g~ip~ 241 (720)
+|.+. .++..+.++.++..|.+.+|++. .++..++.+++|++|++++|+++.........+++.|++++|.++..+|.
T Consensus 218 ~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~~i~~~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 218 NNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQISSISSLGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred CCcce-ecchhhhhcccccccccCCceee-eccchhccccccceeccccccccccccccccCccCEEeccCccccccchh
Confidence 99744 46678889999999999999998 56888999999999999999999876644446799999999999977775
Q ss_pred cc
Q 005001 242 EL 243 (720)
Q Consensus 242 ~l 243 (720)
..
T Consensus 296 ~~ 297 (394)
T COG4886 296 IA 297 (394)
T ss_pred hh
Confidence 44
No 475
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.96 E-value=3.8e-08 Score=101.01 Aligned_cols=262 Identities=16% Similarity=0.187 Sum_probs=159.9
Q ss_pred cceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceE------E-eecCeEEEE
Q 005001 415 EFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGY------C-AEHGQRLLV 486 (720)
Q Consensus 415 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~------~-~~~~~~~lV 486 (720)
.+.||+|+.+.+|..-.- +. .+.|++..... ....+...| |... .||-+-.=+.+ . ......-+.
T Consensus 16 gr~LgqGgea~ly~l~e~-~d-~VAKIYh~Ppp--a~~aqk~a~---la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGfl 88 (637)
T COG4248 16 GRPLGQGGEADLYTLGEV-RD-QVAKIYHAPPP--AAQAQKVAE---LAATPDAPLLNYRVAWPQATLHGGRRGKVIGFL 88 (637)
T ss_pred CccccCCccceeeecchh-hc-hhheeecCCCc--hHHHHHHHH---hccCCCCcchhhhhcccHHHhhCCCccceeEEe
Confidence 456999999999975321 12 23466654332 122222222 3333 56644331111 1 122236788
Q ss_pred EEecCCC-CHHHHhhh--ccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 487 YEYVGNG-NLHDMLHF--ADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 487 ~e~~~~g-sL~~~l~~--~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
|+.+++. ...++++- .+..-....|.-++++++.++.+.+.||.. |.+-+|+.++|+|+++++.+.+.|-..-.
T Consensus 89 mP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDsfq 165 (637)
T COG4248 89 MPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDSFQ 165 (637)
T ss_pred cccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEccccee
Confidence 8887763 22232221 112234578999999999999999999999 99999999999999999999999866544
Q ss_pred cCCCCCccccccccccccccCccccc-----cCCCcccchhhhHHHHHHHHHhC-CCCCCCCCC-----cchh-hHHHhh
Q 005001 564 LTPNTERQVSTQMVGAFGYSAPEFAL-----SGIYTVKSDVYSFGVVMLELLTG-RKPLDSSRP-----RSEQ-SLVRWA 631 (720)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg-~~pf~~~~~-----~~~~-~~~~~~ 631 (720)
...+ +......+|...|.+||.-. +..-+...|.|.|||++++++.| ++||.+-.. ...+ .+..
T Consensus 166 i~~n--g~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~-- 241 (637)
T COG4248 166 INAN--GTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAH-- 241 (637)
T ss_pred eccC--CceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhc--
Confidence 3322 22223357899999999765 34456789999999999999986 899975321 1111 1111
Q ss_pred ccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCC--CCCCCCHHHHHHHHHHHHH
Q 005001 632 TPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPE--PEFRPPMSEVVQALVRLVQ 691 (720)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d--P~~RPs~~ell~~L~~~~~ 691 (720)
..+........-..+......-.-.+..+..+..+|+... +.-||+++..+..|-++.+
T Consensus 242 -g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~ 302 (637)
T COG4248 242 -GRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQ 302 (637)
T ss_pred -ceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHH
Confidence 0011111111111111111111234567888999998653 5689999999888866544
No 476
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.91 E-value=8.2e-10 Score=103.81 Aligned_cols=113 Identities=26% Similarity=0.323 Sum_probs=40.5
Q ss_pred cccCCCCCCEEEccCCCCCCCCCCC-CCCccceeccccccCcCCCCccccccCCccEEEccccccccccccccCCCCCCC
Q 005001 102 LLSDLLSLRKFDLSGNSIHDTIPYQ-LPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLA 180 (720)
Q Consensus 102 ~l~~l~~L~~L~L~~N~l~~~~p~~-~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 180 (720)
.+.+...+++|+|++|.|+..-... ...+|+.|+|++|.|+ .++ .+..+++|+.|+|++|+|+...+.....+++|+
T Consensus 14 ~~~n~~~~~~L~L~~n~I~~Ie~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~ 91 (175)
T PF14580_consen 14 QYNNPVKLRELNLRGNQISTIENLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQ 91 (175)
T ss_dssp ----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S-CHHHHHH-TT--
T ss_pred ccccccccccccccccccccccchhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCCccccchHHhCCcCC
Confidence 3455667899999999988432222 1268899999999998 343 577889999999999999854332224688999
Q ss_pred eeecCCCcccCCC-CccccCCCCCCeeEecccccccc
Q 005001 181 TLDLSFNNFSGDL-PNSFISLSNISSLYLQNNQVTGS 216 (720)
Q Consensus 181 ~L~l~~N~l~g~~-p~~~~~l~~L~~L~l~~N~l~~~ 216 (720)
.|+|++|+|...- -..++.+++|+.|+|.+|.++..
T Consensus 92 ~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~ 128 (175)
T PF14580_consen 92 ELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEK 128 (175)
T ss_dssp EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGS
T ss_pred EEECcCCcCCChHHhHHHHcCCCcceeeccCCcccch
Confidence 9999999987421 24567888999999999998753
No 477
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.89 E-value=2e-10 Score=112.04 Aligned_cols=102 Identities=29% Similarity=0.406 Sum_probs=42.7
Q ss_pred CCCCEEEccCCCCCCCCCCCC--CCccceeccccccCcCCCCccccccCCccEEEccccccccccccccCCCCCCCeeec
Q 005001 107 LSLRKFDLSGNSIHDTIPYQL--PPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDL 184 (720)
Q Consensus 107 ~~L~~L~L~~N~l~~~~p~~~--~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 184 (720)
+.|+.||||+|.|+ .+..+. .+.++.|+||+|.|. .+- ++..|++|+.||||+|.|+. +..+=..|-+++.|.|
T Consensus 284 q~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~-nLa~L~~L~~LDLS~N~Ls~-~~Gwh~KLGNIKtL~L 359 (490)
T KOG1259|consen 284 QELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQ-NLAELPQLQLLDLSGNLLAE-CVGWHLKLGNIKTLKL 359 (490)
T ss_pred hhhhhccccccchh-hhhhhhhhccceeEEecccccee-eeh-hhhhcccceEeecccchhHh-hhhhHhhhcCEeeeeh
Confidence 33444444444444 222221 244444455544444 221 24444444445554444442 2222233444444444
Q ss_pred CCCcccCCCCccccCCCCCCeeEecccccc
Q 005001 185 SFNNFSGDLPNSFISLSNISSLYLQNNQVT 214 (720)
Q Consensus 185 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 214 (720)
+.|.|.. + ..+..+-+|..||+++|+|.
T Consensus 360 a~N~iE~-L-SGL~KLYSLvnLDl~~N~Ie 387 (490)
T KOG1259|consen 360 AQNKIET-L-SGLRKLYSLVNLDLSSNQIE 387 (490)
T ss_pred hhhhHhh-h-hhhHhhhhheeccccccchh
Confidence 4444431 1 12334444444444444443
No 478
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.88 E-value=2.8e-10 Score=116.72 Aligned_cols=173 Identities=23% Similarity=0.240 Sum_probs=117.8
Q ss_pred CCEEEEEcCCCCCcc--cccccccCCCCCCEEEccCCCCCCCCC---CCCCCccceeccccccCcC-CCCccccccCCcc
Q 005001 83 SAVVSIDISGLGLSG--TMGYLLSDLLSLRKFDLSGNSIHDTIP---YQLPPNLTSLNLASNNFSG-NLPYSIASMVSLS 156 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g--~~~~~l~~l~~L~~L~L~~N~l~~~~p---~~~~~~L~~L~L~~N~l~g-~~p~~~~~l~~L~ 156 (720)
.+|+.|||+.|=+.. ++-.....|++|+.|+|+.|++.-... ....++|+.|.|+.+.|+- .+-..+..+|+|+
T Consensus 146 ~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~ 225 (505)
T KOG3207|consen 146 PNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLE 225 (505)
T ss_pred CcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHH
Confidence 478888888886654 223445678888889999988763322 2223788888888888882 2333455678999
Q ss_pred EEEccccccccccccccCCCCCCCeeecCCCcccCCCC--ccccCCCCCCeeEecccccccc--cccc------CCCCcC
Q 005001 157 YLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLP--NSFISLSNISSLYLQNNQVTGS--LNVF------SGLPLT 226 (720)
Q Consensus 157 ~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p--~~~~~l~~L~~L~l~~N~l~~~--~~~~------~~~~L~ 226 (720)
.|+|..|..-+.-......+..|+.|||++|++-. .+ ...+.++.|..|+++.+.|+.. ++.. ...+|+
T Consensus 226 ~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~-~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~ 304 (505)
T KOG3207|consen 226 VLYLEANEIILIKATSTKILQTLQELDLSNNNLID-FDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLE 304 (505)
T ss_pred HhhhhcccccceecchhhhhhHHhhccccCCcccc-cccccccccccchhhhhccccCcchhcCCCccchhhhcccccce
Confidence 99999886333333344557789999999999873 44 3467888888888888888762 2221 113489
Q ss_pred eEEccCccCcccCc-----ccccccceeeecCCcCC
Q 005001 227 TLNVANNHFSGWIP-----RELISIRTFIYDGNSFD 257 (720)
Q Consensus 227 ~l~l~~N~l~g~ip-----~~l~~l~~l~l~~n~~~ 257 (720)
+|+++.|++.. .+ ..+.+++.|.+..|+++
T Consensus 305 ~L~i~~N~I~~-w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 305 YLNISENNIRD-WRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred eeecccCcccc-ccccchhhccchhhhhhccccccc
Confidence 99999999863 22 13456666677677665
No 479
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.86 E-value=4.1e-08 Score=99.72 Aligned_cols=142 Identities=15% Similarity=0.104 Sum_probs=100.2
Q ss_pred eeccCCCcEEEEEEEcCCcEEEEEEccccccCh---------HHHHHHHHHHHHhhcCCCCCc--cccceEEee-----c
Q 005001 417 LIGEGSLGRVYRAEFANGKIMAVKKIDNAALSL---------QEEDNFLEAVSNMSRLRHPNI--VTLAGYCAE-----H 480 (720)
Q Consensus 417 ~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~---------~~~~~~~~e~~~l~~l~h~ni--v~l~~~~~~-----~ 480 (720)
.+-.-....|++.+. +|+.|.||......... .....+.+|...+.++...+| +.++++.+. .
T Consensus 29 ~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~ 107 (268)
T PRK15123 29 VFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPAT 107 (268)
T ss_pred EEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCcc
Confidence 444444455777765 57889999774332110 001136788888777744333 445556543 2
Q ss_pred CeEEEEEEecCCC-CHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC-------CC
Q 005001 481 GQRLLVYEYVGNG-NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD-------EL 552 (720)
Q Consensus 481 ~~~~lV~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~-------~~ 552 (720)
...++|+|++++. +|.+++.... ....+...+..++.+++..+..||.. ||+|+|+++.|||++. ++
T Consensus 108 ~~s~LVte~l~~~~sL~~~~~~~~--~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~ 182 (268)
T PRK15123 108 RTSFIITEDLAPTISLEDYCADWA--TNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDL 182 (268)
T ss_pred ceeEEEEeeCCCCccHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCc
Confidence 3578999999886 8999885221 24456677888999999999999999 9999999999999975 46
Q ss_pred ceEEcccCCCcc
Q 005001 553 NPHLSDCGLAAL 564 (720)
Q Consensus 553 ~~kl~Dfg~a~~ 564 (720)
.+.++||+.++.
T Consensus 183 ~~~LIDl~r~~~ 194 (268)
T PRK15123 183 KLSVIDLHRAQI 194 (268)
T ss_pred eEEEEECCcccc
Confidence 899999998854
No 480
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.86 E-value=1.2e-08 Score=97.56 Aligned_cols=127 Identities=23% Similarity=0.283 Sum_probs=82.7
Q ss_pred EEEEEEEcCCcEEEEEEcccccc------------------------ChHHHHHHHHHHHHhhcCCCC--CccccceEEe
Q 005001 425 RVYRAEFANGKIMAVKKIDNAAL------------------------SLQEEDNFLEAVSNMSRLRHP--NIVTLAGYCA 478 (720)
Q Consensus 425 ~Vy~~~~~~~~~vavK~~~~~~~------------------------~~~~~~~~~~e~~~l~~l~h~--niv~l~~~~~ 478 (720)
.||.|...+|..+|+|..+.... .........+|++.|.++..- ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 48999999999999998743210 011123456799999999765 456665442
Q ss_pred ecCeEEEEEEecC--CCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHH-HHhcCCCCcEEecCCCCCEEeCCCCceE
Q 005001 479 EHGQRLLVYEYVG--NGNLHDMLHFADDSSKNLTWNARVRVALGTARALEY-LHEVCLPSVVHRNFKSANILLDDELNPH 555 (720)
Q Consensus 479 ~~~~~~lV~e~~~--~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~-LH~~~~~~iiH~Dlkp~NIll~~~~~~k 555 (720)
..++||||++ |..+..+.. ..++......++.+++..+.. +|.. ||+|+|+.+.||+++++ .+.
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~------~~~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~ 146 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKD------VDLSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVY 146 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHH------CGGGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEE
T ss_pred ---CCEEEEEecCCCccchhhHHh------ccccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEE
Confidence 3579999998 655554433 111133456677788885555 4677 99999999999999988 999
Q ss_pred EcccCCCccC
Q 005001 556 LSDCGLAALT 565 (720)
Q Consensus 556 l~Dfg~a~~~ 565 (720)
|+|||.+...
T Consensus 147 iIDf~qav~~ 156 (188)
T PF01163_consen 147 IIDFGQAVDS 156 (188)
T ss_dssp E--GTTEEET
T ss_pred EEecCcceec
Confidence 9999987654
No 481
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.85 E-value=2.1e-09 Score=83.00 Aligned_cols=60 Identities=43% Similarity=0.577 Sum_probs=32.3
Q ss_pred CccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccc
Q 005001 154 SLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQV 213 (720)
Q Consensus 154 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l 213 (720)
+|++|+|++|+|+...+..|..+++|++|+|++|+++...|..|.++++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 455555555555544444555555555555555555544444555555555555555543
No 482
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.83 E-value=2.3e-09 Score=82.75 Aligned_cols=61 Identities=43% Similarity=0.573 Sum_probs=54.4
Q ss_pred CccceeccccccCcCCCCccccccCCccEEEccccccccccccccCCCCCCCeeecCCCcc
Q 005001 129 PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNF 189 (720)
Q Consensus 129 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 189 (720)
++|++|+|++|+|+...+..|.++++|++|+|++|.++...|..|..+++|++|+|++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4688889999988866567889999999999999999988888999999999999999986
No 483
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.74 E-value=3.5e-07 Score=96.62 Aligned_cols=170 Identities=19% Similarity=0.262 Sum_probs=124.8
Q ss_pred CCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEee----cCeEEEEEEecCC-CCH
Q 005001 422 SLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE----HGQRLLVYEYVGN-GNL 495 (720)
Q Consensus 422 ~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lV~e~~~~-gsL 495 (720)
--.+.|++.. .+|..|++|+++.... ........-+++++++.|+|||++.++|.. +..+++||+|+++ ++|
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~--~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRD--QSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL 365 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccc--cCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence 3457799954 4899999999943221 111122345778899999999999988763 4578999999875 567
Q ss_pred HHHhhhc-----------cCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 496 HDMLHFA-----------DDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 496 ~~~l~~~-----------~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
.++.=.. -..+...++...+.++.|+..||.++|+. |..-+-|.+.+|+++.+.+++|...|....
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dv 442 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDV 442 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceee
Confidence 6643110 01233567899999999999999999999 999999999999999999999998888765
Q ss_pred CCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCC
Q 005001 565 TPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRK 614 (720)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~ 614 (720)
...+.. |-+.+ -.+-|.=.||.++..|.||..
T Consensus 443 l~~d~~---------------~~le~---~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 443 LQEDPT---------------EPLES---QQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred ecCCCC---------------cchhH---HhhhhHHHHHHHHHHHhhccc
Confidence 543220 11222 135688899999999999865
No 484
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.74 E-value=6.5e-10 Score=120.25 Aligned_cols=127 Identities=25% Similarity=0.328 Sum_probs=95.0
Q ss_pred CccceeccccccCcCCCCccccccCCccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCcc-ccCCCCCCeeE
Q 005001 129 PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNS-FISLSNISSLY 207 (720)
Q Consensus 129 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~~~l~~L~~L~ 207 (720)
..|.+.+.+.|.+. ....++.-++.|+.|||++|+++... .+..++.|++|||+.|.|. .+|.- ...+ .|+.|.
T Consensus 164 n~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc-~L~~L~ 238 (1096)
T KOG1859|consen 164 NKLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR-HVPQLSMVGC-KLQLLN 238 (1096)
T ss_pred hhHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc-cccccchhhh-hheeee
Confidence 46777888888888 66777888888888888888888654 6777888888888888888 56542 2244 388888
Q ss_pred eccccccccccccCCCCcCeEEccCccCccc---Cc-ccccccceeeecCCcCCCCC
Q 005001 208 LQNNQVTGSLNVFSGLPLTTLNVANNHFSGW---IP-RELISIRTFIYDGNSFDNGP 260 (720)
Q Consensus 208 l~~N~l~~~~~~~~~~~L~~l~l~~N~l~g~---ip-~~l~~l~~l~l~~n~~~~~~ 260 (720)
|+||-++.........+|..|||++|-|.+- .| -.+..|..|.|.|||++|.|
T Consensus 239 lrnN~l~tL~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~p 295 (1096)
T KOG1859|consen 239 LRNNALTTLRGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCAP 295 (1096)
T ss_pred ecccHHHhhhhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccCH
Confidence 8888888765555666788888888888653 22 24567788888888888865
No 485
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.72 E-value=5.2e-09 Score=114.15 Aligned_cols=150 Identities=19% Similarity=0.273 Sum_probs=108.2
Q ss_pred HHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccccc--------cccccccccCcccccc
Q 005001 519 LGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVST--------QMVGAFGYSAPEFALS 590 (720)
Q Consensus 519 ~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~--------~~~gt~~y~aPE~~~~ 590 (720)
.+++.|+.|+|... ++||+.|.|++|.++.++..||+.|+.+............ -..-...|.|||++.+
T Consensus 106 ~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 34558999999874 9999999999999999999999999987554432221111 1123457999999999
Q ss_pred CCCcccchhhhHHHHHHHHHhCCCC-CCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhc
Q 005001 591 GIYTVKSDVYSFGVVMLELLTGRKP-LDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCV 669 (720)
Q Consensus 591 ~~~~~~~DvwSlGv~l~elltg~~p-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 669 (720)
...+.++|+||+||++|.+..|..+ +........ .......+......++...+.++.+=+.+++
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~--------------~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l 249 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLS--------------YSFSRNLLNAGAFGYSNNLPSELRESLKKLL 249 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcch--------------hhhhhcccccccccccccCcHHHHHHHHHHh
Confidence 8899999999999999999954444 443322111 1122222223333445677889999999999
Q ss_pred CCCCCCCCCHHHHHH
Q 005001 670 QPEPEFRPPMSEVVQ 684 (720)
Q Consensus 670 ~~dP~~RPs~~ell~ 684 (720)
..++..||++.++..
T Consensus 250 ~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 250 NGDSAVRPTLDLLLS 264 (700)
T ss_pred cCCcccCcchhhhhc
Confidence 999999998777654
No 486
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.65 E-value=2.5e-07 Score=90.88 Aligned_cols=137 Identities=18% Similarity=0.138 Sum_probs=99.7
Q ss_pred CCccceeccCCCcEEEEEEEcCCcEEEEEEccccc------------------cC--hHHHHHHHHHHHHhhcCCCC--C
Q 005001 412 FSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAA------------------LS--LQEEDNFLEAVSNMSRLRHP--N 469 (720)
Q Consensus 412 y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~------------------~~--~~~~~~~~~e~~~l~~l~h~--n 469 (720)
..+...||-|--+.||.|....|.++|+|.=+... .+ .-......+|++.|.++... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 34557899999999999999999999998532110 01 11123456889999888554 6
Q ss_pred ccccceEEeecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeC
Q 005001 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD 549 (720)
Q Consensus 470 iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~ 549 (720)
|.+.+++ +...+|||+++|-.|... +++......++..|+.-+.-+-.. ||||+|+++-||+++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~---------r~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~ 236 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRL---------RLDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVT 236 (304)
T ss_pred CCCcccc----ccceeeeehcccceeecc---------cCcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEe
Confidence 7776654 467899999998655432 113444555666666666666666 999999999999999
Q ss_pred CCCceEEcccCCCcc
Q 005001 550 DELNPHLSDCGLAAL 564 (720)
Q Consensus 550 ~~~~~kl~Dfg~a~~ 564 (720)
++|.+.++||--+..
T Consensus 237 ~dg~~~vIDwPQ~v~ 251 (304)
T COG0478 237 EDGDIVVIDWPQAVP 251 (304)
T ss_pred cCCCEEEEeCccccc
Confidence 999999999987653
No 487
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=98.60 E-value=5.5e-09 Score=106.01 Aligned_cols=137 Identities=26% Similarity=0.347 Sum_probs=89.4
Q ss_pred CCCCCCCCccceeccccccCcCCCCccccccCCccEEEccccccccccccccCCCCCCCeeecCC-CcccCCCCccccCC
Q 005001 122 TIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSF-NNFSGDLPNSFISL 200 (720)
Q Consensus 122 ~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~g~~p~~~~~l 200 (720)
.+|..++++-..|+|..|+|+...|.+|+.+++|+.|||++|+|+-+-|.+|.++.+|..|-+.+ |+|+..-...|++|
T Consensus 60 eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL 139 (498)
T KOG4237|consen 60 EVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGL 139 (498)
T ss_pred cCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhH
Confidence 56666666777777777777755556777777777777777777777777777777776665544 77774333456777
Q ss_pred CCCCeeEecccccccccc-ccCC-CCcCeEEccCccCcccCcc----cccccceeeecCCcCCCC
Q 005001 201 SNISSLYLQNNQVTGSLN-VFSG-LPLTTLNVANNHFSGWIPR----ELISIRTFIYDGNSFDNG 259 (720)
Q Consensus 201 ~~L~~L~l~~N~l~~~~~-~~~~-~~L~~l~l~~N~l~g~ip~----~l~~l~~l~l~~n~~~~~ 259 (720)
..|+.|.+.-|++.-... .+.. .+|..|.|-+|.+. .|+. .+.+++.+.+..|+|-|.
T Consensus 140 ~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~icd 203 (498)
T KOG4237|consen 140 SSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFICD 203 (498)
T ss_pred HHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCccccc
Confidence 777777777777765442 2222 23666677777765 3443 345566777777876554
No 488
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.60 E-value=1.1e-08 Score=112.12 Aligned_cols=170 Identities=24% Similarity=0.240 Sum_probs=98.7
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEcccc
Q 005001 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRN 163 (720)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N 163 (720)
.+..|++.+|+|.+... .+..+.+|++|+|++|.|+...+..-...|+.|++++|.|+. + ..+..+++|+.++|++|
T Consensus 96 ~l~~l~l~~n~i~~i~~-~l~~~~~L~~L~ls~N~I~~i~~l~~l~~L~~L~l~~N~i~~-~-~~~~~l~~L~~l~l~~n 172 (414)
T KOG0531|consen 96 SLEALDLYDNKIEKIEN-LLSSLVNLQVLDLSFNKITKLEGLSTLTLLKELNLSGNLISD-I-SGLESLKSLKLLDLSYN 172 (414)
T ss_pred ceeeeeccccchhhccc-chhhhhcchheeccccccccccchhhccchhhheeccCcchh-c-cCCccchhhhcccCCcc
Confidence 56666777776664322 255666677777777777665555555567777777777662 2 23444666777777777
Q ss_pred ccccccc-cccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCCCC--cCeEEccCccCcc--c
Q 005001 164 SLTQSIG-DIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLP--LTTLNVANNHFSG--W 238 (720)
Q Consensus 164 ~l~~~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~--L~~l~l~~N~l~g--~ 238 (720)
++...-+ . ...+.+|+.|++++|.+. ....+..+..+..+++..|.++-.-+...... |+.+++++|.+.- .
T Consensus 173 ~i~~ie~~~-~~~~~~l~~l~l~~n~i~--~i~~~~~~~~l~~~~l~~n~i~~~~~l~~~~~~~L~~l~l~~n~i~~~~~ 249 (414)
T KOG0531|consen 173 RIVDIENDE-LSELISLEELDLGGNSIR--EIEGLDLLKKLVLLSLLDNKISKLEGLNELVMLHLRELYLSGNRISRSPE 249 (414)
T ss_pred hhhhhhhhh-hhhccchHHHhccCCchh--cccchHHHHHHHHhhcccccceeccCcccchhHHHHHHhcccCccccccc
Confidence 7664433 2 455666666677776665 12233444455555666666654333222222 6777777777762 1
Q ss_pred CcccccccceeeecCCcCCCC
Q 005001 239 IPRELISIRTFIYDGNSFDNG 259 (720)
Q Consensus 239 ip~~l~~l~~l~l~~n~~~~~ 259 (720)
....+..+..+++.+|.+...
T Consensus 250 ~~~~~~~l~~l~~~~n~~~~~ 270 (414)
T KOG0531|consen 250 GLENLKNLPVLDLSSNRISNL 270 (414)
T ss_pred cccccccccccchhhcccccc
Confidence 234455666666666665543
No 489
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.58 E-value=3.3e-07 Score=90.07 Aligned_cols=108 Identities=22% Similarity=0.297 Sum_probs=83.4
Q ss_pred HHHHHHHHHHhhcCCCC--CccccceEEeecC----eEEEEEEecCCC-CHHHHhhhccCCCCCCCHHHHHHHHHHHHHH
Q 005001 452 EDNFLEAVSNMSRLRHP--NIVTLAGYCAEHG----QRLLVYEYVGNG-NLHDMLHFADDSSKNLTWNARVRVALGTARA 524 (720)
Q Consensus 452 ~~~~~~e~~~l~~l~h~--niv~l~~~~~~~~----~~~lV~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~ 524 (720)
.....+|...+..+... .+.+.+++..... ..++|+|++++. +|.+++... ...+......++.+++..
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~----~~~~~~~~~~ll~~l~~~ 130 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQW----EQLDPSQRRELLRALARL 130 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhh----cccchhhHHHHHHHHHHH
Confidence 44567777777666433 3556666665532 458999999874 799988632 226667788899999999
Q ss_pred HHHHHhcCCCCcEEecCCCCCEEeCCCC---ceEEcccCCCccCC
Q 005001 525 LEYLHEVCLPSVVHRNFKSANILLDDEL---NPHLSDCGLAALTP 566 (720)
Q Consensus 525 L~~LH~~~~~~iiH~Dlkp~NIll~~~~---~~kl~Dfg~a~~~~ 566 (720)
++-||.. ||+|+|+++.|||++.++ .+.++||+-++...
T Consensus 131 i~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~ 172 (206)
T PF06293_consen 131 IAKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP 172 (206)
T ss_pred HHHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence 9999999 999999999999999887 89999999876543
No 490
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.51 E-value=1.9e-08 Score=103.46 Aligned_cols=174 Identities=21% Similarity=0.192 Sum_probs=123.8
Q ss_pred CEEEEEcCCCCCccccc-ccccCCCCCCEEEccCCCCCCCCC----CCCCCccceeccccccCcCCCCccc-cccCCccE
Q 005001 84 AVVSIDISGLGLSGTMG-YLLSDLLSLRKFDLSGNSIHDTIP----YQLPPNLTSLNLASNNFSGNLPYSI-ASMVSLSY 157 (720)
Q Consensus 84 ~v~~l~l~~~~l~g~~~-~~l~~l~~L~~L~L~~N~l~~~~p----~~~~~~L~~L~L~~N~l~g~~p~~~-~~l~~L~~ 157 (720)
.+..+.|.+....-... .....|++++.||||.|-|....| .+..++|+.|+|+.|++.-...... ..++.|+.
T Consensus 122 kL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~ 201 (505)
T KOG3207|consen 122 KLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQ 201 (505)
T ss_pred hhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhhe
Confidence 45556666665542211 467789999999999999885444 2234899999999999984444333 35789999
Q ss_pred EEcccccccc-ccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccc--cccCC-CCcCeEEccCc
Q 005001 158 LNVSRNSLTQ-SIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSL--NVFSG-LPLTTLNVANN 233 (720)
Q Consensus 158 L~L~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~--~~~~~-~~L~~l~l~~N 233 (720)
|.|+.+.|+- .+-..+..+++|+.|+|..|...+.--.....+..|++|+|++|++.... +.... ..|+.|+++.+
T Consensus 202 L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~t 281 (505)
T KOG3207|consen 202 LVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSST 281 (505)
T ss_pred EEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhcccc
Confidence 9999999983 23445567899999999999633333344556788999999999987644 22222 34888888888
Q ss_pred cCcc-cCcc--------cccccceeeecCCcCC
Q 005001 234 HFSG-WIPR--------ELISIRTFIYDGNSFD 257 (720)
Q Consensus 234 ~l~g-~ip~--------~l~~l~~l~l~~n~~~ 257 (720)
.+.. .+|+ .|.+++.|.++.|++.
T Consensus 282 gi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~ 314 (505)
T KOG3207|consen 282 GIASIAEPDVESLDKTHTFPKLEYLNISENNIR 314 (505)
T ss_pred CcchhcCCCccchhhhcccccceeeecccCccc
Confidence 8854 2443 4678899999999873
No 491
>PRK09902 hypothetical protein; Provisional
Probab=98.51 E-value=1.5e-06 Score=83.57 Aligned_cols=143 Identities=17% Similarity=0.132 Sum_probs=104.9
Q ss_pred cceeccCCCcEEEEEEEcCCcEEEEEEcccccc-C---hHHHHHHHHHHHHhhcCCCC--CccccceEEe-e----cCeE
Q 005001 415 EFLIGEGSLGRVYRAEFANGKIMAVKKIDNAAL-S---LQEEDNFLEAVSNMSRLRHP--NIVTLAGYCA-E----HGQR 483 (720)
Q Consensus 415 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~---~~~~~~~~~e~~~l~~l~h~--niv~l~~~~~-~----~~~~ 483 (720)
.---|+||.+-|++.... |+.+-+|+-..... + +.....|.+|+..+.++... .+.++. ++. . .-..
T Consensus 23 ~pN~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA 100 (216)
T PRK09902 23 EPNYRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRA 100 (216)
T ss_pred CCCcCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEE
Confidence 334678999999998775 44688888752221 1 33467899999988887432 255555 332 1 1245
Q ss_pred EEEEEecCC-CCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCc--eEEcccC
Q 005001 484 LLVYEYVGN-GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN--PHLSDCG 560 (720)
Q Consensus 484 ~lV~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~--~kl~Dfg 560 (720)
+||+|-+++ -+|.+++... ...+.+...+..++.+++..++-||.. ++.|+|+.+.||+++.++. ++++||.
T Consensus 101 ~LVTe~L~g~~~L~~~l~~~--~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlE 175 (216)
T PRK09902 101 LLVTEDMAGFISIADWYAQH--AVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLE 175 (216)
T ss_pred EEEEEeCCCCccHHHHHhcC--CcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhh
Confidence 899997753 5888887521 234567778889999999999999999 9999999999999986667 9999998
Q ss_pred CCcc
Q 005001 561 LAAL 564 (720)
Q Consensus 561 ~a~~ 564 (720)
-++.
T Consensus 176 k~r~ 179 (216)
T PRK09902 176 KSRR 179 (216)
T ss_pred ccch
Confidence 7654
No 492
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.49 E-value=1.7e-07 Score=66.31 Aligned_cols=39 Identities=49% Similarity=1.026 Sum_probs=28.9
Q ss_pred hHHHHHHHHHHHhcCC-C-CCCCCCCCCC-CCCCCCCCceeEec
Q 005001 41 SSDVQALQVLYTSLNS-P-SVLTNWKGNE-GDPCGESWKGVACE 81 (720)
Q Consensus 41 ~~d~~al~~~~~~~~~-~-~~l~~w~~~~-~~~c~~~w~gv~c~ 81 (720)
..|++||++||+++.+ + ..+.+|+.+. .+|| +|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C--~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPC--SWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CC--CSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCe--eeccEEeC
Confidence 5799999999999985 4 5899998764 6777 79999996
No 493
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.41 E-value=2.8e-08 Score=108.76 Aligned_cols=170 Identities=24% Similarity=0.270 Sum_probs=121.9
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCC-CCCCCccceeccccccCcCCCCccccccCCccEEEccc
Q 005001 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIP-YQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (720)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 162 (720)
.+..+++..|.+.- +-..+..+++|..|+|.+|+|.+... ....++|++|+|++|.|+... .+..++.|+.|++++
T Consensus 73 ~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~l~~ 149 (414)
T KOG0531|consen 73 SLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELNLSG 149 (414)
T ss_pred hHHhhccchhhhhh-hhcccccccceeeeeccccchhhcccchhhhhcchheecccccccccc--chhhccchhhheecc
Confidence 34455566666653 34457888899999999999986665 455689999999999998543 466777799999999
Q ss_pred cccccccccccCCCCCCCeeecCCCcccCCCCcc-ccCCCCCCeeEeccccccccccccCCCCcCeEEccCccCcccCcc
Q 005001 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNS-FISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPR 241 (720)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~g~ip~ 241 (720)
|.|+.. ..+..+++|+.|++++|++.. +... ...+.+|..+++.+|.+.-.-.......+..+++..|.++-.-+.
T Consensus 150 N~i~~~--~~~~~l~~L~~l~l~~n~i~~-ie~~~~~~~~~l~~l~l~~n~i~~i~~~~~~~~l~~~~l~~n~i~~~~~l 226 (414)
T KOG0531|consen 150 NLISDI--SGLESLKSLKLLDLSYNRIVD-IENDELSELISLEELDLGGNSIREIEGLDLLKKLVLLSLLDNKISKLEGL 226 (414)
T ss_pred Ccchhc--cCCccchhhhcccCCcchhhh-hhhhhhhhccchHHHhccCCchhcccchHHHHHHHHhhcccccceeccCc
Confidence 998843 345568889999999999884 4332 577788899999999887654444444455568888888643332
Q ss_pred -cccc--cceeeecCCcCCCC
Q 005001 242 -ELIS--IRTFIYDGNSFDNG 259 (720)
Q Consensus 242 -~l~~--l~~l~l~~n~~~~~ 259 (720)
.... ++.+.+.+|++...
T Consensus 227 ~~~~~~~L~~l~l~~n~i~~~ 247 (414)
T KOG0531|consen 227 NELVMLHLRELYLSGNRISRS 247 (414)
T ss_pred ccchhHHHHHHhcccCccccc
Confidence 2222 78888888888755
No 494
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.35 E-value=1.6e-08 Score=87.95 Aligned_cols=125 Identities=28% Similarity=0.345 Sum_probs=79.8
Q ss_pred EEEEcCCCCCcccccc---cccCCCCCCEEEccCCCCCCCCCCCCC---CccceeccccccCcCCCCccccccCCccEEE
Q 005001 86 VSIDISGLGLSGTMGY---LLSDLLSLRKFDLSGNSIHDTIPYQLP---PNLTSLNLASNNFSGNLPYSIASMVSLSYLN 159 (720)
Q Consensus 86 ~~l~l~~~~l~g~~~~---~l~~l~~L~~L~L~~N~l~~~~p~~~~---~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 159 (720)
-.++|+++.|- .++. .+.....|+..+|++|.|. ..|..+. +.++.|+|++|.|+ .+|..+..++.|+.|+
T Consensus 30 h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lN 106 (177)
T KOG4579|consen 30 HFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLN 106 (177)
T ss_pred hhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcc
Confidence 34566666653 3333 3445566667788888887 5555443 46788888888888 6777788888888888
Q ss_pred ccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccc
Q 005001 160 VSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTG 215 (720)
Q Consensus 160 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~ 215 (720)
++.|.|. ..|..+..|.+|..|+..+|.+. .+|..+..-+++-...+.+|.+.+
T Consensus 107 l~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~ 160 (177)
T KOG4579|consen 107 LRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGD 160 (177)
T ss_pred cccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccc
Confidence 8888777 45566666777777777777776 566554333333333444444443
No 495
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.31 E-value=9.5e-09 Score=111.46 Aligned_cols=122 Identities=25% Similarity=0.278 Sum_probs=94.7
Q ss_pred CCCEEEccCCCCCCCCCCC--CCCccceeccccccCcCCCCccccccCCccEEEcccccccccccc-ccCCCCCCCeeec
Q 005001 108 SLRKFDLSGNSIHDTIPYQ--LPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGD-IFGNLAGLATLDL 184 (720)
Q Consensus 108 ~L~~L~L~~N~l~~~~p~~--~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~l 184 (720)
.|.+.+.+.|.+. ....+ +.+.|+.|||++|+++..- .+..|++|++|||++|.|+- +|. ....+ .|+.|.|
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~-vp~l~~~gc-~L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRH-VPQLSMVGC-KLQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhcc-ccccchhhh-hheeeee
Confidence 3666777788776 33323 3489999999999999543 88999999999999999984 343 22233 4999999
Q ss_pred CCCcccCCCCccccCCCCCCeeEeccccccccc---cccCCCCcCeEEccCccCc
Q 005001 185 SFNNFSGDLPNSFISLSNISSLYLQNNQVTGSL---NVFSGLPLTTLNVANNHFS 236 (720)
Q Consensus 185 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~---~~~~~~~L~~l~l~~N~l~ 236 (720)
.+|.++. + ..+.+|.+|..|||++|-|.+.- |.+....|..|+|.+|.+.
T Consensus 240 rnN~l~t-L-~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 240 RNNALTT-L-RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred cccHHHh-h-hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 9999983 3 24788999999999999998843 5556667999999999996
No 496
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.29 E-value=4.5e-08 Score=98.26 Aligned_cols=174 Identities=18% Similarity=0.238 Sum_probs=126.9
Q ss_pred CEEEEEcCCCCCcccccc----cccCCCCCCEEEccCCCCC---CCC-CC---------CC--CCccceeccccccCcCC
Q 005001 84 AVVSIDISGLGLSGTMGY----LLSDLLSLRKFDLSGNSIH---DTI-PY---------QL--PPNLTSLNLASNNFSGN 144 (720)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~----~l~~l~~L~~L~L~~N~l~---~~~-p~---------~~--~~~L~~L~L~~N~l~g~ 144 (720)
+++.||||+|-+.-.-+. .|..++.|++|.|.+|.+. |.. -. -. .+.|+++..++|++...
T Consensus 93 ~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ 172 (382)
T KOG1909|consen 93 KLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENG 172 (382)
T ss_pred ceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccc
Confidence 789999999988654443 4667899999999999886 111 11 11 26899999999998743
Q ss_pred C----CccccccCCccEEEccccccccc----cccccCCCCCCCeeecCCCcccC----CCCccccCCCCCCeeEecccc
Q 005001 145 L----PYSIASMVSLSYLNVSRNSLTQS----IGDIFGNLAGLATLDLSFNNFSG----DLPNSFISLSNISSLYLQNNQ 212 (720)
Q Consensus 145 ~----p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~g----~~p~~~~~l~~L~~L~l~~N~ 212 (720)
- ...|...+.|+.+.+..|.+.-. +...|..++.|++|||.+|-|+- .+-..+..+++|+.|+++++.
T Consensus 173 ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcl 252 (382)
T KOG1909|consen 173 GATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCL 252 (382)
T ss_pred cHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccc
Confidence 2 34566778999999999988732 34567889999999999999873 233556778899999999999
Q ss_pred cccc--c---cccC--CCCcCeEEccCccCccc----Cc---ccccccceeeecCCcCC
Q 005001 213 VTGS--L---NVFS--GLPLTTLNVANNHFSGW----IP---RELISIRTFIYDGNSFD 257 (720)
Q Consensus 213 l~~~--~---~~~~--~~~L~~l~l~~N~l~g~----ip---~~l~~l~~l~l~~n~~~ 257 (720)
+... . ..+. ..+|+.|.|.+|.++-. +- ...+.|..|.+++|.+.
T Consensus 253 l~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 253 LENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred cccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 8752 2 2222 23599999999999632 11 13456788999999885
No 497
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.28 E-value=1.2e-06 Score=96.45 Aligned_cols=143 Identities=23% Similarity=0.275 Sum_probs=92.9
Q ss_pred ceeccCCCcEEEEEEEcCCcEEEEEEccccccC---------------------------hH-----------HHHHHHH
Q 005001 416 FLIGEGSLGRVYRAEFANGKIMAVKKIDNAALS---------------------------LQ-----------EEDNFLE 457 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~---------------------------~~-----------~~~~~~~ 457 (720)
+.|+.++-|.||+|++++|+.||||+.+..... .. .+-++.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 579999999999999999999999997432110 00 0112334
Q ss_pred HHHHhhcC-----CCCCccccceEEeecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHH-HHHHHhc
Q 005001 458 AVSNMSRL-----RHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARA-LEYLHEV 531 (720)
Q Consensus 458 e~~~l~~l-----~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~-L~~LH~~ 531 (720)
|...+.++ +.++|.-..=|++-.....++|||++|-.+.+...-. ....+... ++..++++ +..+-..
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~---~~g~d~k~---ia~~~~~~f~~q~~~d 284 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALK---SAGIDRKE---LAELLVRAFLRQLLRD 284 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHH---hcCCCHHH---HHHHHHHHHHHHHHhc
Confidence 44444433 2344332222333456679999999998888874311 23344222 23332222 2333334
Q ss_pred CCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 532 CLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 532 ~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
|+.|.|..|.||+++.+|++.+.|||+......
T Consensus 285 ---gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 285 ---GFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred ---CccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 899999999999999999999999999876654
No 498
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.26 E-value=1.7e-05 Score=76.74 Aligned_cols=140 Identities=14% Similarity=0.181 Sum_probs=91.4
Q ss_pred HhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHH-H------HHHHHHHHhhcC---CCCCccccceEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEE-D------NFLEAVSNMSRL---RHPNIVTLAGYC 477 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~-~------~~~~e~~~l~~l---~h~niv~l~~~~ 477 (720)
..++|...+++-......|.+.+. +|+.+++|.........+.. . ...+++..+.++ .......++.+.
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ 107 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA 107 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence 456788888888877777777666 47889999887654221111 1 122333333333 333333333333
Q ss_pred ee-----cCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCC
Q 005001 478 AE-----HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL 552 (720)
Q Consensus 478 ~~-----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~ 552 (720)
.. ....++||||++|..|.+... ++. .++..+.+++..+|+. |+.|+|..|.|++++.+
T Consensus 108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~--------i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv~~~- 171 (229)
T PF06176_consen 108 EKKIFRYTSSYVLLMEYIEGVELNDIED--------IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFLVSNN- 171 (229)
T ss_pred eeeeccceeEEEEEEEEecCeecccchh--------cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEEEECC-
Confidence 22 234578999999987766432 222 2445677889999999 99999999999999865
Q ss_pred ceEEcccCCCcc
Q 005001 553 NPHLSDCGLAAL 564 (720)
Q Consensus 553 ~~kl~Dfg~a~~ 564 (720)
.++++||+..+.
T Consensus 172 ~i~iID~~~k~~ 183 (229)
T PF06176_consen 172 GIRIIDTQGKRM 183 (229)
T ss_pred cEEEEECccccc
Confidence 599999987653
No 499
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.26 E-value=1.1e-05 Score=80.35 Aligned_cols=140 Identities=14% Similarity=0.183 Sum_probs=83.3
Q ss_pred ceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCC--ccccceEEeecCeEEEEEEecCCC
Q 005001 416 FLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN--IVTLAGYCAEHGQRLLVYEYVGNG 493 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lV~e~~~~g 493 (720)
..||+|..+.||+. .+..+++|...... ......+|.++++.+..-. +.+.+++....+...+|||+++|.
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~ 79 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF----DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGK 79 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC----CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCc
Confidence 46899999999984 25567788876422 2344678888888875433 466777777777788999999986
Q ss_pred C-HHHHhh--------------h-----ccCCCCCCCHHHHHH-HHH----------HHHH-HHHHHHhc-CCCCcEEec
Q 005001 494 N-LHDMLH--------------F-----ADDSSKNLTWNARVR-VAL----------GTAR-ALEYLHEV-CLPSVVHRN 540 (720)
Q Consensus 494 s-L~~~l~--------------~-----~~~~~~~~~~~~~~~-i~~----------qi~~-~L~~LH~~-~~~~iiH~D 540 (720)
+ +...+. . ..-............ +.. .+.. ...+|... ..+.++|+|
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD 159 (226)
T TIGR02172 80 RSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGD 159 (226)
T ss_pred cchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecC
Confidence 3 211110 0 000000111111000 000 0001 12222211 123678999
Q ss_pred CCCCCEEeCCCCceEEcccCCCc
Q 005001 541 FKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 541 lkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
+.|.||++++++ +.|+||+.+.
T Consensus 160 ~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 160 FQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred CCCCcEEEcCCC-cEEEechhcC
Confidence 999999999988 9999999875
No 500
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.21 E-value=3.1e-06 Score=82.46 Aligned_cols=155 Identities=19% Similarity=0.222 Sum_probs=99.1
Q ss_pred chhcHHHHhcCCCccc---eeccCCCcEEEEEEEcCCcEEEEEEccccccChHHH-----------------HH-----H
Q 005001 401 TVASLQTATNSFSQEF---LIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEE-----------------DN-----F 455 (720)
Q Consensus 401 ~~~~~~~~~~~y~~~~---~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~-----------------~~-----~ 455 (720)
+...+....++..+.. .|+.|--+.||+|...++..+|+|+++.....-... .+ .
T Consensus 36 t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~ 115 (268)
T COG1718 36 TLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWA 115 (268)
T ss_pred HHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHH
Confidence 3444444444544444 466788889999998889999999986433211110 00 1
Q ss_pred HHHHHHhhcCC--CCCccccceEEeecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 005001 456 LEAVSNMSRLR--HPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533 (720)
Q Consensus 456 ~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~ 533 (720)
.+|+..|.++. +-.+.+.+++. ...|||||+..... ..-.-..-.+...++..+..++++.+.-|-..+
T Consensus 116 ~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~----pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a- 186 (268)
T COG1718 116 RKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGL----PAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEA- 186 (268)
T ss_pred HHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCC----CCCCcccCCcCchhHHHHHHHHHHHHHHHHHhc-
Confidence 34555565552 34444555443 24799999965311 000000112233367778888888888888743
Q ss_pred CCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 534 PSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 534 ~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
++||+||+.-|||+. ++.+.|+|||-|....
T Consensus 187 -~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~ 217 (268)
T COG1718 187 -GLVHGDLSEYNILVH-DGEPYIIDVSQAVTID 217 (268)
T ss_pred -CcccccchhhheEEE-CCeEEEEECccccccC
Confidence 999999999999999 7899999999886443
Done!