Query 005001
Match_columns 720
No_of_seqs 607 out of 5250
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 12:22:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005001.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005001hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3omv_A RAF proto-oncogene seri 100.0 8.7E-54 3E-58 443.2 23.2 264 406-690 32-299 (307)
2 4asz_A BDNF/NT-3 growth factor 100.0 4.2E-54 1.4E-58 445.7 20.3 262 410-693 13-291 (299)
3 4aoj_A High affinity nerve gro 100.0 2.3E-53 7.9E-58 446.2 23.6 261 410-692 41-320 (329)
4 4gt4_A Tyrosine-protein kinase 100.0 1.2E-53 4E-58 444.3 18.3 258 411-689 27-304 (308)
5 4b9d_A Serine/threonine-protei 100.0 1.4E-53 4.9E-58 447.8 19.0 253 410-685 24-277 (350)
6 4ase_A Vascular endothelial gr 100.0 3.3E-52 1.1E-56 441.0 21.2 272 403-694 57-350 (353)
7 3fpq_A Serine/threonine-protei 100.0 3.9E-52 1.3E-56 427.8 21.0 249 413-685 29-283 (290)
8 4g3f_A NF-kappa-beta-inducing 100.0 3.6E-52 1.2E-56 435.2 20.6 256 410-694 58-319 (336)
9 4fih_A Serine/threonine-protei 100.0 2.6E-52 8.8E-57 437.5 19.3 251 409-685 73-324 (346)
10 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.6E-52 5.5E-57 432.6 15.7 260 410-695 32-294 (311)
11 3hyh_A Carbon catabolite-derep 100.0 3.5E-51 1.2E-55 416.9 20.2 248 410-685 13-263 (275)
12 4fie_A Serine/threonine-protei 100.0 3.3E-51 1.1E-55 439.6 20.5 251 409-685 150-401 (423)
13 3ubd_A Ribosomal protein S6 ki 100.0 4.5E-52 1.5E-56 429.3 11.8 244 410-679 24-271 (304)
14 3hmm_A TGF-beta receptor type- 100.0 1.3E-50 4.4E-55 422.3 22.1 273 410-693 3-299 (303)
15 4g31_A Eukaryotic translation 100.0 6.2E-49 2.1E-53 407.7 18.2 249 410-685 5-280 (299)
16 4b99_A Mitogen-activated prote 100.0 9.3E-48 3.2E-52 414.0 19.5 269 409-685 53-345 (398)
17 4f9c_A Cell division cycle 7-r 100.0 1.3E-46 4.4E-51 400.9 22.9 267 405-685 16-353 (361)
18 3v5w_A G-protein coupled recep 100.0 6.4E-46 2.2E-50 415.8 19.6 252 409-685 188-450 (689)
19 2qkw_B Protein kinase; three-h 100.0 5.3E-45 1.8E-49 385.1 22.0 287 400-692 29-316 (321)
20 3uim_A Brassinosteroid insensi 100.0 5.3E-45 1.8E-49 385.9 20.5 290 397-688 17-308 (326)
21 3uto_A Twitchin; kinase, muscl 100.0 5.8E-45 2E-49 411.4 22.1 251 409-685 156-411 (573)
22 3p86_A Serine/threonine-protei 100.0 9E-44 3.1E-48 373.3 22.4 265 408-694 35-301 (309)
23 2psq_A Fibroblast growth facto 100.0 2.3E-43 7.8E-48 379.7 24.7 266 409-695 80-368 (370)
24 4hcu_A Tyrosine-protein kinase 100.0 2.3E-43 7.8E-48 362.7 21.5 258 409-692 9-267 (269)
25 3fe3_A MAP/microtubule affinit 100.0 1.8E-43 6.2E-48 373.7 20.7 250 409-685 14-265 (328)
26 3kul_A Ephrin type-A receptor 100.0 4.2E-43 1.4E-47 371.0 22.5 262 409-694 48-316 (325)
27 3gen_A Tyrosine-protein kinase 100.0 3.1E-43 1E-47 364.6 19.9 261 407-693 21-282 (283)
28 3fxz_A Serine/threonine-protei 100.0 8.2E-43 2.8E-47 364.0 23.1 252 408-685 18-270 (297)
29 3zgw_A Maternal embryonic leuc 100.0 1.7E-43 5.8E-48 376.1 17.9 254 406-685 6-261 (347)
30 3s95_A LIMK-1, LIM domain kina 100.0 5.1E-43 1.8E-47 368.0 20.8 262 409-693 9-284 (310)
31 3soc_A Activin receptor type-2 100.0 7.7E-43 2.6E-47 368.6 21.9 276 408-693 22-320 (322)
32 2qol_A Ephrin receptor; recept 100.0 8.8E-43 3E-47 375.4 22.0 262 409-694 44-312 (373)
33 3cbl_A C-FES, proto-oncogene t 100.0 2.7E-43 9.3E-48 380.4 17.9 261 408-692 112-375 (377)
34 3sxs_A Cytoplasmic tyrosine-pr 100.0 5.5E-43 1.9E-47 359.6 19.3 258 408-691 6-264 (268)
35 4eqm_A Protein kinase; transfe 100.0 7.5E-43 2.6E-47 363.8 19.1 265 409-693 10-277 (294)
36 3lb7_A RAF proto-oncogene seri 100.0 5.9E-42 2E-46 359.2 25.6 264 408-692 34-301 (307)
37 2ivs_A Proto-oncogene tyrosine 100.0 1.8E-42 6.3E-47 364.2 20.8 266 407-693 20-313 (314)
38 3tt0_A Basic fibroblast growth 100.0 3.9E-42 1.3E-46 372.1 23.8 270 407-697 66-358 (382)
39 1o6l_A RAC-beta serine/threoni 100.0 2.5E-42 8.5E-47 366.0 21.5 250 410-685 5-261 (337)
40 3qup_A Tyrosine-protein kinase 100.0 2.2E-42 7.4E-47 365.4 20.8 273 405-697 18-304 (323)
41 1mp8_A Focal adhesion kinase 1 100.0 2.5E-42 8.6E-47 357.4 20.8 261 408-693 13-278 (281)
42 3vhe_A Vascular endothelial gr 100.0 1.1E-42 3.6E-47 373.4 18.5 272 402-693 14-357 (359)
43 3l9p_A Anaplastic lymphoma kin 100.0 2E-42 6.7E-47 372.1 19.6 268 409-697 70-351 (367)
44 1luf_A Muscle-specific tyrosin 100.0 1.5E-42 5.2E-47 369.7 18.1 268 405-693 42-337 (343)
45 3kmu_A ILK, integrin-linked ki 100.0 3.7E-42 1.3E-46 353.7 19.8 255 409-691 9-270 (271)
46 3niz_A Rhodanese family protei 100.0 8.3E-42 2.9E-46 358.8 22.8 271 407-685 18-301 (311)
47 3soa_A Calcium/calmodulin-depe 100.0 6.9E-42 2.4E-46 375.6 23.1 255 407-685 8-268 (444)
48 3ugc_A Tyrosine-protein kinase 100.0 2.2E-42 7.4E-47 360.5 18.2 273 409-693 9-293 (295)
49 1qcf_A Haematopoetic cell kina 100.0 9.6E-43 3.3E-47 385.3 16.4 261 405-691 183-444 (454)
50 3t9t_A Tyrosine-protein kinase 100.0 4.4E-42 1.5E-46 352.5 19.7 258 409-692 7-265 (267)
51 3kfa_A Tyrosine-protein kinase 100.0 3E-42 1E-46 357.9 18.7 267 405-696 8-276 (288)
52 2yab_A Death-associated protei 100.0 8.3E-42 2.9E-46 365.3 22.5 251 408-685 10-273 (361)
53 2bdw_A Hypothetical protein K1 100.0 5.5E-42 1.9E-46 367.6 21.2 254 407-685 26-285 (362)
54 1opk_A P150, C-ABL, proto-onco 100.0 1.6E-42 5.4E-47 387.4 17.6 262 407-693 217-480 (495)
55 3dtc_A Mitogen-activated prote 100.0 5.1E-42 1.7E-46 352.9 19.9 256 409-689 6-271 (271)
56 3q4u_A Activin receptor type-1 100.0 1.1E-41 3.8E-46 356.0 22.4 255 409-689 7-300 (301)
57 1t46_A HOMO sapiens V-KIT hard 100.0 6.9E-42 2.4E-46 359.7 20.4 268 407-694 20-310 (313)
58 2nru_A Interleukin-1 receptor- 100.0 6.5E-41 2.2E-45 351.4 27.7 283 398-690 13-305 (307)
59 3tki_A Serine/threonine-protei 100.0 4.5E-42 1.5E-46 362.7 18.6 254 409-685 6-262 (323)
60 3dbq_A Dual specificity protei 100.0 3.4E-42 1.2E-46 367.0 17.8 255 408-686 7-275 (343)
61 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.7E-42 9.2E-47 381.4 17.5 260 407-692 181-441 (452)
62 3v8s_A RHO-associated protein 100.0 1.3E-42 4.6E-47 377.0 14.5 258 404-685 63-330 (410)
63 2c30_A Serine/threonine-protei 100.0 2.4E-41 8.1E-46 356.9 23.7 248 412-685 47-295 (321)
64 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.9E-42 9.9E-47 368.0 16.8 251 409-685 22-281 (353)
65 3o0g_A Cell division protein k 100.0 1.3E-41 4.4E-46 354.1 21.1 268 410-685 2-283 (292)
66 1ob3_A PFPK5, cell division co 100.0 5.1E-42 1.8E-46 356.4 17.9 267 410-685 2-281 (288)
67 4aw2_A Serine/threonine-protei 100.0 2.3E-42 8E-47 377.9 16.1 261 403-685 67-339 (437)
68 3c0i_A Peripheral plasma membr 100.0 7.6E-42 2.6E-46 365.3 19.6 256 409-685 23-287 (351)
69 4f0f_A Serine/threonine-protei 100.0 2.6E-41 8.8E-46 350.8 22.6 254 409-688 18-286 (287)
70 2izr_A Casein kinase I isoform 100.0 2.2E-41 7.4E-46 358.9 22.4 266 409-696 8-286 (330)
71 3poz_A Epidermal growth factor 100.0 7.7E-42 2.6E-46 361.8 18.9 259 409-692 14-279 (327)
72 2zv2_A Calcium/calmodulin-depe 100.0 1.2E-41 4.2E-46 355.4 20.2 252 409-685 12-293 (298)
73 1k9a_A Carboxyl-terminal SRC k 100.0 1.7E-41 5.9E-46 374.7 22.5 254 408-692 191-446 (450)
74 4euu_A Serine/threonine-protei 100.0 5.9E-41 2E-45 353.8 25.5 278 409-693 8-311 (319)
75 1qpc_A LCK kinase; alpha beta 100.0 9.4E-42 3.2E-46 352.6 19.0 264 405-694 8-272 (279)
76 4dc2_A Protein kinase C IOTA t 100.0 1.3E-41 4.3E-46 367.3 20.6 259 409-685 51-319 (396)
77 1tki_A Titin; serine kinase, m 100.0 1.7E-41 5.9E-46 357.8 21.1 250 409-685 4-258 (321)
78 2pvf_A Fibroblast growth facto 100.0 2.8E-41 9.6E-46 358.6 22.7 267 408-695 33-322 (334)
79 3og7_A AKAP9-BRAF fusion prote 100.0 1.4E-41 4.9E-46 353.2 19.8 264 407-691 21-288 (289)
80 1fot_A TPK1 delta, CAMP-depend 100.0 1.7E-41 5.9E-46 356.9 20.7 247 410-685 6-259 (318)
81 1rjb_A FL cytokine receptor; k 100.0 7.9E-42 2.7E-46 364.4 18.3 269 406-694 41-337 (344)
82 3brb_A Proto-oncogene tyrosine 100.0 2.7E-41 9.3E-46 355.3 22.0 269 405-693 29-310 (313)
83 2zmd_A Dual specificity protei 100.0 1.4E-41 4.6E-46 368.4 20.2 253 409-685 55-321 (390)
84 4e5w_A Tyrosine-protein kinase 100.0 1.3E-41 4.4E-46 355.8 19.2 272 409-691 20-302 (302)
85 3lxp_A Non-receptor tyrosine-p 100.0 2.5E-41 8.6E-46 356.4 21.5 274 412-696 33-315 (318)
86 1csn_A Casein kinase-1; phosph 100.0 2.1E-41 7E-46 353.4 20.6 266 409-695 9-287 (298)
87 4fr4_A YANK1, serine/threonine 100.0 2.4E-41 8.3E-46 363.9 21.5 252 409-684 14-271 (384)
88 3kex_A Receptor tyrosine-prote 100.0 9.5E-42 3.3E-46 360.8 17.6 260 409-693 12-278 (325)
89 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.9E-41 6.7E-46 361.3 19.9 247 410-685 41-294 (350)
90 2y0a_A Death-associated protei 100.0 2E-41 7E-46 358.2 19.8 255 408-685 9-272 (326)
91 1p4o_A Insulin-like growth fac 100.0 1.4E-41 4.9E-46 358.9 18.6 271 402-693 17-301 (322)
92 2wqm_A Serine/threonine-protei 100.0 8.5E-41 2.9E-45 351.0 24.2 267 409-693 31-299 (310)
93 1u59_A Tyrosine-protein kinase 100.0 7E-41 2.4E-45 347.6 23.3 262 410-696 9-277 (287)
94 1xjd_A Protein kinase C, theta 100.0 7.5E-42 2.6E-46 363.4 16.2 253 407-685 14-270 (345)
95 2xir_A Vascular endothelial gr 100.0 2.3E-41 8E-46 356.1 19.8 271 404-694 21-313 (316)
96 1fvr_A Tyrosine-protein kinase 100.0 5.2E-41 1.8E-45 355.5 22.6 264 410-696 25-305 (327)
97 1xbb_A Tyrosine-protein kinase 100.0 3.1E-41 1E-45 351.1 20.4 264 409-697 15-285 (291)
98 3a8x_A Protein kinase C IOTA t 100.0 4.5E-41 1.5E-45 357.9 22.1 259 410-685 9-276 (345)
99 3h4j_B AMPK kdaid, SNF1-like p 100.0 8.5E-42 2.9E-46 361.6 16.2 249 409-685 8-259 (336)
100 1mqb_A Ephrin type-A receptor 100.0 7.6E-41 2.6E-45 355.0 23.5 264 409-696 43-314 (333)
101 2vd5_A DMPK protein; serine/th 100.0 6.6E-42 2.3E-46 371.8 15.5 259 404-685 55-328 (412)
102 3cc6_A Protein tyrosine kinase 100.0 3.8E-41 1.3E-45 348.5 20.5 260 408-692 10-274 (281)
103 3p1a_A MYT1 kinase, membrane-a 100.0 2.6E-41 9E-46 355.1 19.4 249 408-685 55-305 (311)
104 3uc3_A Serine/threonine-protei 100.0 3E-41 1E-45 361.9 20.0 253 409-685 19-275 (361)
105 3gni_B Strad alpha; kinase fol 100.0 5.3E-41 1.8E-45 364.3 22.2 272 409-685 24-334 (389)
106 4agu_A Cyclin-dependent kinase 100.0 8.8E-41 3E-45 351.0 23.1 268 410-685 3-285 (311)
107 3op5_A Serine/threonine-protei 100.0 3E-41 1E-45 362.8 19.5 276 408-697 33-335 (364)
108 2i0e_A Protein kinase C-beta I 100.0 2.9E-41 1E-45 360.0 19.1 251 409-685 19-277 (353)
109 3c1x_A Hepatocyte growth facto 100.0 4.5E-41 1.5E-45 361.7 20.7 261 410-694 89-358 (373)
110 3pls_A Macrophage-stimulating 100.0 1.8E-40 6.1E-45 346.3 24.2 261 411-694 22-290 (298)
111 2w5a_A Serine/threonine-protei 100.0 1.7E-41 5.9E-46 350.6 16.3 257 409-686 5-269 (279)
112 3mdy_A Bone morphogenetic prot 100.0 2.6E-40 8.9E-45 351.5 25.8 266 405-693 32-333 (337)
113 3a62_A Ribosomal protein S6 ki 100.0 3.5E-41 1.2E-45 356.6 18.9 251 409-685 16-277 (327)
114 3lzb_A Epidermal growth factor 100.0 5.3E-41 1.8E-45 355.2 20.1 260 409-693 14-280 (327)
115 2eva_A TAK1 kinase - TAB1 chim 100.0 1E-40 3.4E-45 350.0 22.0 260 410-696 8-268 (307)
116 3f66_A Hepatocyte growth facto 100.0 1E-40 3.4E-45 348.3 21.8 261 409-693 24-293 (298)
117 3oz6_A Mitogen-activated prote 100.0 2E-41 6.8E-46 367.5 16.9 269 407-685 6-329 (388)
118 2h34_A Serine/threonine-protei 100.0 7.7E-41 2.6E-45 351.2 20.6 264 409-694 33-299 (309)
119 2ozo_A Tyrosine-protein kinase 100.0 1.4E-40 4.7E-45 380.4 24.4 260 412-696 337-603 (613)
120 3kk8_A Calcium/calmodulin depe 100.0 1.3E-40 4.5E-45 344.9 21.9 252 409-685 5-262 (284)
121 3qd2_B Eukaryotic translation 100.0 5.8E-41 2E-45 355.5 19.5 250 409-685 5-326 (332)
122 2h8h_A Proto-oncogene tyrosine 100.0 8.4E-42 2.9E-46 385.0 13.7 260 406-691 263-523 (535)
123 3hko_A Calcium/calmodulin-depe 100.0 4.9E-41 1.7E-45 358.4 18.7 263 404-685 20-331 (345)
124 2i1m_A Macrophage colony-stimu 100.0 2.7E-41 9.3E-46 358.6 16.6 268 406-693 42-328 (333)
125 1kob_A Twitchin; kinase, intra 100.0 1.6E-40 5.6E-45 358.6 22.8 253 409-685 50-305 (387)
126 2w4o_A Calcium/calmodulin-depe 100.0 8.2E-41 2.8E-45 356.9 20.2 250 408-685 51-306 (349)
127 2buj_A Serine/threonine-protei 100.0 2.8E-41 9.7E-46 355.8 16.4 265 407-691 26-306 (317)
128 2pmi_A Negative RE, cyclin-dep 100.0 8E-41 2.8E-45 352.3 19.8 271 409-685 4-294 (317)
129 1b6c_B TGF-B superfamily recep 100.0 2.8E-40 9.6E-45 352.0 24.1 267 402-694 34-339 (342)
130 1x8b_A WEE1HU, WEE1-like prote 100.0 8E-41 2.7E-45 346.9 19.2 250 408-685 9-280 (289)
131 3lxl_A Tyrosine-protein kinase 100.0 4.7E-41 1.6E-45 355.8 17.6 274 410-694 23-306 (327)
132 4ejn_A RAC-alpha serine/threon 100.0 3.5E-41 1.2E-45 372.3 17.1 251 409-685 147-405 (446)
133 2y94_A 5'-AMP-activated protei 100.0 1.2E-40 4.2E-45 368.0 21.3 250 409-685 15-267 (476)
134 1u5q_A Serine/threonine protei 100.0 8.4E-41 2.9E-45 356.4 19.3 249 409-685 53-306 (348)
135 3llt_A Serine/threonine kinase 100.0 1.5E-40 5E-45 356.9 20.8 273 400-685 25-356 (360)
136 4hgt_A Casein kinase I isoform 100.0 2.4E-40 8.2E-45 344.9 21.8 269 408-697 7-286 (296)
137 4fl3_A Tyrosine-protein kinase 100.0 1.1E-40 3.9E-45 382.0 21.2 252 416-692 375-632 (635)
138 3ork_A Serine/threonine protei 100.0 8.8E-41 3E-45 351.1 18.5 262 408-692 10-282 (311)
139 2r5t_A Serine/threonine-protei 100.0 7.4E-41 2.5E-45 359.4 18.3 247 409-681 37-286 (373)
140 3is5_A Calcium-dependent prote 100.0 1.4E-40 4.7E-45 345.0 19.6 255 409-685 21-279 (285)
141 3ttj_A Mitogen-activated prote 100.0 3E-40 1E-44 365.4 23.3 265 409-685 61-356 (464)
142 3fme_A Dual specificity mitoge 100.0 7.7E-41 2.6E-45 347.7 17.2 258 408-685 5-267 (290)
143 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.7E-40 5.8E-45 371.0 21.1 259 409-685 184-449 (543)
144 2eue_A Carbon catabolite derep 100.0 1.3E-40 4.6E-45 343.2 18.7 248 410-685 13-263 (275)
145 2yex_A Serine/threonine-protei 100.0 2.9E-40 1E-44 340.7 20.9 254 409-685 6-262 (276)
146 3gxj_A TGF-beta receptor type- 100.0 3.7E-42 1.3E-46 359.9 6.7 259 409-692 2-298 (303)
147 3fdn_A Serine/threonine-protei 100.0 1.5E-40 5E-45 343.7 18.5 250 408-685 7-258 (279)
148 2yfx_A Tyrosine-protein kinase 100.0 2.7E-40 9.1E-45 350.0 20.7 269 408-697 28-310 (327)
149 1t4h_A Serine/threonine-protei 100.0 3.5E-40 1.2E-44 342.8 21.2 250 410-685 26-283 (290)
150 4eut_A Serine/threonine-protei 100.0 2.8E-40 9.5E-45 359.2 21.2 278 409-693 8-311 (396)
151 3uzp_A CKI-delta, CKID, casein 100.0 4.4E-40 1.5E-44 343.0 21.8 267 409-696 8-285 (296)
152 3kn6_A Ribosomal protein S6 ki 100.0 1E-40 3.4E-45 352.7 16.9 249 415-685 16-271 (325)
153 2acx_A G protein-coupled recep 100.0 1.5E-40 5.2E-45 372.1 19.1 257 408-685 182-445 (576)
154 3eqc_A Dual specificity mitoge 100.0 1.8E-40 6.1E-45 356.3 18.9 267 409-685 32-325 (360)
155 3dls_A PAS domain-containing s 100.0 9.6E-41 3.3E-45 354.3 16.6 246 407-685 21-275 (335)
156 4aaa_A Cyclin-dependent kinase 100.0 2.3E-40 7.7E-45 351.2 19.4 269 409-685 24-307 (331)
157 1byg_A CSK, protein (C-termina 100.0 1.4E-40 4.9E-45 343.6 17.4 254 409-693 20-275 (278)
158 1cm8_A Phosphorylated MAP kina 100.0 3.2E-40 1.1E-44 354.7 20.8 264 409-685 24-308 (367)
159 3g33_A Cell division protein k 100.0 3.7E-40 1.3E-44 345.8 20.7 271 407-685 6-297 (308)
160 3rp9_A Mitogen-activated prote 100.0 1.5E-40 5.2E-45 368.6 18.7 269 409-685 52-397 (458)
161 2x4f_A Myosin light chain kina 100.0 3E-40 1E-44 355.4 20.2 246 414-685 93-343 (373)
162 3g2f_A Bone morphogenetic prot 100.0 2.8E-40 9.6E-45 351.2 19.5 276 409-695 12-322 (336)
163 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.1E-40 3.9E-45 353.1 16.4 269 408-685 32-319 (329)
164 3lm5_A Serine/threonine-protei 100.0 2.6E-40 8.9E-45 350.0 19.0 264 401-685 19-288 (327)
165 2a19_B Interferon-induced, dou 100.0 2E-40 6.9E-45 343.3 17.7 253 407-694 8-277 (284)
166 2a2a_A Death-associated protei 100.0 4.6E-40 1.6E-44 347.2 20.6 253 408-685 10-273 (321)
167 3cok_A Serine/threonine-protei 100.0 2.7E-40 9.3E-45 341.4 18.3 252 409-685 10-263 (278)
168 4fvq_A Tyrosine-protein kinase 100.0 9.1E-41 3.1E-45 347.0 14.2 254 409-693 7-277 (289)
169 2qr7_A Ribosomal protein S6 ki 100.0 2E-40 7E-45 352.4 17.1 251 408-685 20-278 (342)
170 2w1i_A JAK2; chromosomal rearr 100.0 3.3E-40 1.1E-44 349.1 18.6 272 409-692 40-323 (326)
171 1nxk_A MAP kinase-activated pr 100.0 9.1E-40 3.1E-44 355.1 22.4 251 410-686 61-323 (400)
172 3mwu_A Calmodulin-domain prote 100.0 5.2E-40 1.8E-44 366.9 21.0 252 408-685 20-277 (486)
173 3f3z_A Calcium/calmodulin-depe 100.0 6E-40 2E-44 338.7 19.6 248 408-685 7-262 (277)
174 3mi9_A Cell division protein k 100.0 7.8E-40 2.7E-44 350.0 21.2 269 410-685 17-312 (351)
175 3a7i_A MST3 kinase, serine/thr 100.0 8.4E-40 2.9E-44 342.2 20.7 251 409-686 21-272 (303)
176 3an0_A Dual specificity mitoge 100.0 2.7E-40 9.2E-45 352.0 17.2 259 406-685 47-311 (340)
177 1vzo_A Ribosomal protein S6 ki 100.0 1E-40 3.4E-45 357.2 13.8 257 409-686 53-323 (355)
178 3e7e_A HBUB1, BUB1A, mitotic c 100.0 7.3E-40 2.5E-44 352.1 20.6 259 406-694 61-342 (365)
179 2rku_A Serine/threonine-protei 100.0 7.8E-40 2.7E-44 340.9 20.0 251 409-685 14-266 (294)
180 1u46_A ACK-1, activated CDC42 100.0 3.8E-40 1.3E-44 342.6 17.4 260 409-691 17-284 (291)
181 3n9x_A Phosphotransferase; mal 100.0 1.9E-39 6.5E-44 356.6 23.9 201 409-617 25-253 (432)
182 3i6u_A CDS1, serine/threonine- 100.0 1E-39 3.4E-44 357.2 21.5 254 406-685 131-400 (419)
183 3ll6_A Cyclin G-associated kin 100.0 3.2E-40 1.1E-44 350.6 16.9 265 405-696 23-313 (337)
184 2v62_A Serine/threonine-protei 100.0 1.4E-40 4.9E-45 354.8 14.1 265 409-689 36-326 (345)
185 3lij_A Calcium/calmodulin depe 100.0 5.9E-40 2E-44 367.1 19.8 253 407-685 34-292 (494)
186 3cek_A Dual specificity protei 100.0 4.4E-40 1.5E-44 346.1 17.5 263 400-686 18-294 (313)
187 2owb_A Serine/threonine-protei 100.0 7E-40 2.4E-44 348.0 19.1 252 408-685 39-292 (335)
188 2jii_A Serine/threonine-protei 100.0 2.3E-40 7.9E-45 354.2 15.5 267 409-696 41-341 (352)
189 3mtl_A Cell division protein k 100.0 2.6E-40 9E-45 349.5 15.2 267 410-685 2-282 (324)
190 2vgo_A Serine/threonine-protei 100.0 8E-40 2.7E-44 339.1 18.4 248 410-685 14-263 (284)
191 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.6E-40 5.4E-45 350.4 13.1 267 402-693 25-304 (319)
192 2r3i_A Cell division protein k 100.0 1.2E-39 4E-44 340.4 19.6 269 410-685 3-284 (299)
193 3nyv_A Calmodulin-domain prote 100.0 5.9E-40 2E-44 366.5 18.4 252 408-685 24-282 (484)
194 3bhy_A Death-associated protei 100.0 6.8E-40 2.3E-44 339.3 17.5 254 409-685 4-266 (283)
195 3eb0_A Putative uncharacterize 100.0 5.8E-40 2E-44 355.3 17.5 271 406-691 3-330 (383)
196 2j0j_A Focal adhesion kinase 1 100.0 1.4E-39 4.8E-44 374.3 21.8 263 406-693 386-653 (656)
197 2ac3_A MAP kinase-interacting 100.0 9.6E-40 3.3E-44 343.9 18.2 265 409-685 11-296 (316)
198 2xrw_A Mitogen-activated prote 100.0 2.3E-39 7.8E-44 348.9 21.5 265 409-685 24-319 (371)
199 2jam_A Calcium/calmodulin-depe 100.0 1.6E-39 5.5E-44 340.3 19.8 250 408-685 7-262 (304)
200 2h6d_A 5'-AMP-activated protei 100.0 1.4E-39 4.7E-44 335.7 18.9 250 409-685 10-262 (276)
201 3pfq_A PKC-B, PKC-beta, protei 100.0 9.9E-40 3.4E-44 376.8 19.6 252 408-685 339-598 (674)
202 3byv_A Rhoptry kinase; malaria 100.0 1.1E-40 3.7E-45 360.2 10.3 253 408-691 71-368 (377)
203 1ua2_A CAK, cell division prot 100.0 1.6E-39 5.6E-44 346.7 19.0 271 407-685 7-292 (346)
204 2x7f_A TRAF2 and NCK-interacti 100.0 1.1E-39 3.8E-44 345.0 17.5 261 400-685 14-287 (326)
205 2pml_X PFPK7, Ser/Thr protein 100.0 2E-39 6.9E-44 346.3 19.4 271 408-685 29-323 (348)
206 3sv0_A Casein kinase I-like; t 100.0 3.6E-39 1.2E-43 356.9 22.0 265 409-694 6-281 (483)
207 3q5i_A Protein kinase; CDPK, m 100.0 2.3E-39 7.8E-44 363.3 20.6 253 407-685 33-302 (504)
208 2fst_X Mitogen-activated prote 100.0 1.9E-39 6.5E-44 348.4 19.1 263 409-685 28-312 (367)
209 2y7j_A Phosphorylase B kinase 100.0 2.8E-39 9.4E-44 347.3 20.4 256 405-685 89-360 (365)
210 2clq_A Mitogen-activated prote 100.0 6.2E-39 2.1E-43 334.1 21.9 254 410-685 22-279 (295)
211 3com_A Serine/threonine-protei 100.0 5.1E-39 1.7E-43 338.1 21.0 253 407-685 26-279 (314)
212 3qyz_A Mitogen-activated prote 100.0 1E-38 3.5E-43 343.0 23.4 267 409-685 26-314 (364)
213 4e7w_A Glycogen synthase kinas 100.0 3.6E-39 1.2E-43 350.0 19.5 265 409-685 39-322 (394)
214 2vwi_A Serine/threonine-protei 100.0 1E-39 3.5E-44 341.4 14.6 266 408-685 13-288 (303)
215 3pg1_A Mitogen-activated prote 100.0 1.2E-39 4.1E-44 350.1 15.5 276 401-685 13-317 (362)
216 2wtk_C Serine/threonine-protei 100.0 1.1E-38 3.7E-43 334.1 21.9 253 409-685 4-264 (305)
217 1j1b_A Glycogen synthase kinas 100.0 4.2E-39 1.4E-43 352.3 19.6 260 410-685 54-337 (420)
218 3nsz_A CK II alpha, casein kin 100.0 5.1E-39 1.7E-43 340.6 19.6 259 410-685 36-320 (330)
219 2wei_A Calmodulin-domain prote 100.0 4.9E-39 1.7E-43 333.7 19.0 253 407-685 19-277 (287)
220 3q60_A ROP5B; pseudokinase, tr 100.0 7E-40 2.4E-44 353.1 13.0 256 409-685 61-353 (371)
221 2ycf_A Serine/threonine-protei 100.0 3.5E-39 1.2E-43 340.7 17.7 254 408-685 8-275 (322)
222 4exu_A Mitogen-activated prote 100.0 4.4E-39 1.5E-43 346.7 18.2 264 408-685 40-324 (371)
223 1phk_A Phosphorylase kinase; g 100.0 9.6E-39 3.3E-43 333.3 20.1 253 408-685 15-284 (298)
224 3kvw_A DYRK2, dual specificity 100.0 1.2E-38 4E-43 349.6 21.5 265 408-685 95-409 (429)
225 2j7t_A Serine/threonine-protei 100.0 3.2E-39 1.1E-43 337.6 15.8 253 408-685 17-276 (302)
226 1z57_A Dual specificity protei 100.0 2.5E-38 8.5E-43 336.2 22.7 265 408-685 12-329 (339)
227 1blx_A Cyclin-dependent kinase 100.0 5.9E-39 2E-43 339.4 17.7 270 408-685 9-297 (326)
228 3coi_A Mitogen-activated prote 100.0 2.2E-38 7.5E-43 339.0 21.1 263 409-685 23-306 (353)
229 2i6l_A Mitogen-activated prote 100.0 1.1E-38 3.9E-43 336.0 18.2 265 409-685 10-306 (320)
230 3e3p_A Protein kinase, putativ 100.0 1.4E-38 4.7E-43 341.5 18.6 272 404-685 17-315 (360)
231 3rgf_A Cyclin-dependent kinase 100.0 7.3E-39 2.5E-43 349.3 16.6 268 410-685 20-334 (405)
232 1zy4_A Serine/threonine-protei 100.0 1.8E-38 6.3E-43 331.6 18.8 251 408-685 4-284 (303)
233 2b9h_A MAP kinase FUS3, mitoge 100.0 2.8E-38 9.5E-43 338.2 20.6 268 408-685 9-306 (353)
234 1wak_A Serine/threonine-protei 100.0 2.5E-38 8.4E-43 344.1 19.4 266 408-685 35-392 (397)
235 3aln_A Dual specificity mitoge 100.0 1.3E-38 4.3E-43 337.2 15.8 256 409-685 21-286 (327)
236 2vx3_A Dual specificity tyrosi 100.0 9.3E-38 3.2E-42 337.8 21.5 209 402-621 46-263 (382)
237 3fhr_A MAP kinase-activated pr 100.0 3.9E-38 1.3E-42 334.5 18.0 252 408-685 26-288 (336)
238 2rio_A Serine/threonine-protei 100.0 3.3E-38 1.1E-42 346.7 17.5 253 410-685 15-296 (434)
239 2eu9_A Dual specificity protei 100.0 1.8E-37 6.2E-42 331.8 22.0 265 408-685 17-334 (355)
240 2dyl_A Dual specificity mitoge 100.0 7.5E-38 2.6E-42 329.6 18.4 254 408-685 23-284 (318)
241 3a99_A Proto-oncogene serine/t 100.0 1.3E-38 4.3E-43 336.0 11.8 247 405-685 38-294 (320)
242 1q8y_A SR protein kinase; tran 100.0 1.1E-37 3.8E-42 336.1 18.8 263 409-685 18-334 (373)
243 2iwi_A Serine/threonine-protei 100.0 3.3E-38 1.1E-42 331.5 14.0 247 405-685 26-284 (312)
244 3p23_A Serine/threonine-protei 100.0 1.7E-37 5.7E-42 340.2 18.2 249 409-685 23-284 (432)
245 3qa8_A MGC80376 protein; kinas 100.0 2.9E-37 9.8E-42 348.8 17.5 273 409-694 13-312 (676)
246 3uqc_A Probable conserved tran 100.0 1.6E-36 5.5E-41 314.2 20.9 235 409-693 30-267 (286)
247 2pzi_A Probable serine/threoni 100.0 1.6E-36 5.5E-41 352.2 19.2 243 409-692 79-329 (681)
248 3dzo_A Rhoptry kinase domain; 100.0 4E-36 1.4E-40 327.9 13.6 247 408-685 76-364 (413)
249 3m2w_A MAP kinase-activated pr 100.0 3.3E-35 1.1E-39 306.7 19.4 227 410-685 17-257 (299)
250 2vuw_A Serine/threonine-protei 100.0 3.1E-36 1.1E-40 320.0 5.9 244 409-685 19-332 (336)
251 1ogq_A PGIP-2, polygalacturona 100.0 3.2E-32 1.1E-36 285.8 16.5 221 38-259 2-236 (313)
252 4azs_A Methyltransferase WBDD; 100.0 1.3E-29 4.4E-34 286.1 6.4 187 418-616 242-438 (569)
253 4ecn_A Leucine-rich repeat pro 99.9 1.5E-28 5.3E-33 288.2 9.9 80 39-122 266-363 (876)
254 3rgz_A Protein brassinosteroid 99.9 1E-27 3.5E-32 282.3 15.1 219 35-258 5-261 (768)
255 4eco_A Uncharacterized protein 99.9 5.9E-28 2E-32 278.0 8.5 213 40-257 28-366 (636)
256 4fcg_A Uncharacterized protein 99.9 6.6E-27 2.2E-31 246.9 10.9 215 39-259 24-268 (328)
257 3en9_A Glycoprotease, O-sialog 99.9 3.6E-26 1.2E-30 256.6 10.7 187 413-617 339-539 (540)
258 3rgz_A Protein brassinosteroid 99.9 1E-23 3.5E-28 248.2 12.4 176 83-258 466-718 (768)
259 2o6s_A Variable lymphocyte rec 99.9 4E-23 1.4E-27 203.0 12.2 175 69-248 3-190 (208)
260 2o6q_A Variable lymphocyte rec 99.9 4E-22 1.4E-26 204.3 18.2 177 84-260 38-221 (270)
261 1ogq_A PGIP-2, polygalacturona 99.9 3.8E-23 1.3E-27 216.7 9.3 175 83-258 76-282 (313)
262 1zar_A RIO2 kinase; serine kin 99.9 9.1E-23 3.1E-27 209.9 11.2 163 406-601 86-274 (282)
263 3m19_A Variable lymphocyte rec 99.9 4.7E-22 1.6E-26 201.5 15.3 182 74-259 6-194 (251)
264 2z62_A TOLL-like receptor 4, v 99.9 2.5E-21 8.6E-26 199.0 15.6 176 84-259 29-215 (276)
265 1ozn_A Reticulon 4 receptor; N 99.9 4.1E-21 1.4E-25 198.4 16.7 177 84-260 33-217 (285)
266 1p9a_G Platelet glycoprotein I 99.9 3.8E-21 1.3E-25 198.9 16.2 175 83-259 31-210 (290)
267 3zyi_A Leucine-rich repeat-con 99.9 3.5E-21 1.2E-25 212.6 16.4 186 74-259 55-257 (452)
268 3m19_A Variable lymphocyte rec 99.8 8E-21 2.7E-25 192.4 15.7 167 74-240 15-196 (251)
269 2z66_A Variable lymphocyte rec 99.8 1.9E-21 6.4E-26 203.2 11.1 191 69-260 3-215 (306)
270 3j0a_A TOLL-like receptor 5; m 99.8 8.8E-21 3E-25 225.5 17.9 89 172-260 475-563 (844)
271 4fcg_A Uncharacterized protein 99.8 8E-21 2.8E-25 200.2 14.2 173 83-259 104-292 (328)
272 1ozn_A Reticulon 4 receptor; N 99.8 1.5E-20 5.1E-25 194.2 15.6 178 83-260 56-241 (285)
273 3rfs_A Internalin B, repeat mo 99.8 4.9E-20 1.7E-24 188.9 17.4 175 83-259 41-220 (272)
274 3zyj_A Leucine-rich repeat-con 99.8 2.5E-20 8.5E-25 205.0 15.7 186 74-259 44-246 (440)
275 3v47_A TOLL-like receptor 5B a 99.8 2E-20 6.7E-25 206.8 11.7 150 69-218 6-171 (455)
276 1xku_A Decorin; proteoglycan, 99.8 1E-19 3.5E-24 192.1 16.6 196 60-259 18-231 (330)
277 2z66_A Variable lymphocyte rec 99.8 4.5E-20 1.5E-24 192.6 13.1 176 83-259 78-263 (306)
278 1wwl_A Monocyte differentiatio 99.8 2.1E-20 7.2E-25 195.7 10.0 175 83-259 95-289 (312)
279 2xwt_C Thyrotropin receptor; s 99.8 4.5E-20 1.5E-24 185.3 11.7 190 69-260 6-221 (239)
280 3rfs_A Internalin B, repeat mo 99.8 8E-20 2.7E-24 187.3 13.8 172 82-259 62-237 (272)
281 2v70_A SLIT-2, SLIT homolog 2 99.8 2.6E-20 9E-25 184.4 9.1 151 87-240 15-170 (220)
282 2id5_A Lingo-1, leucine rich r 99.8 1.1E-19 3.9E-24 202.0 15.1 188 71-258 9-214 (477)
283 1w8a_A SLIT protein; signaling 99.8 4.1E-20 1.4E-24 178.9 9.5 171 87-260 12-186 (192)
284 2ft3_A Biglycan; proteoglycan, 99.8 1.9E-19 6.4E-24 190.3 14.8 186 69-259 29-232 (332)
285 3oja_B Anopheles plasmodium-re 99.8 9.9E-20 3.4E-24 208.1 13.6 132 84-215 52-185 (597)
286 2v9t_B SLIT homolog 2 protein 99.8 1.7E-19 5.7E-24 178.6 13.2 156 69-237 7-166 (220)
287 3cvr_A Invasion plasmid antige 99.8 6.4E-20 2.2E-24 205.8 11.3 178 61-260 34-223 (571)
288 4glp_A Monocyte differentiatio 99.8 1.3E-19 4.6E-24 189.4 12.4 176 84-261 92-289 (310)
289 3e6j_A Variable lymphocyte rec 99.8 2.3E-19 8E-24 178.8 13.5 154 73-240 19-176 (229)
290 2xot_A Amphoterin-induced prot 99.8 1.2E-19 4.2E-24 193.9 12.1 170 87-259 22-204 (361)
291 2z80_A TOLL-like receptor 2, v 99.8 1.1E-19 3.8E-24 193.8 11.1 187 72-260 29-238 (353)
292 3v47_A TOLL-like receptor 5B a 99.8 3.9E-19 1.3E-23 196.3 15.7 108 153-260 275-387 (455)
293 3oja_A Leucine-rich immune mol 99.8 6.9E-20 2.3E-24 203.7 9.4 173 84-259 35-229 (487)
294 1wwl_A Monocyte differentiatio 99.8 7.2E-20 2.5E-24 191.6 9.0 174 82-258 120-310 (312)
295 2z81_A CD282 antigen, TOLL-lik 99.8 1.8E-19 6.1E-24 204.1 13.0 185 74-260 5-212 (549)
296 1ziw_A TOLL-like receptor 3; i 99.8 4E-19 1.4E-23 206.6 16.1 173 71-243 2-191 (680)
297 4eco_A Uncharacterized protein 99.8 4.7E-20 1.6E-24 212.1 7.2 175 82-259 248-448 (636)
298 2ft3_A Biglycan; proteoglycan, 99.8 1.7E-18 5.8E-23 182.9 16.9 174 83-259 78-279 (332)
299 3vq2_A TLR4, TOLL-like recepto 99.8 4.5E-19 1.5E-23 203.3 13.1 182 76-257 14-217 (606)
300 3j0a_A TOLL-like receptor 5; m 99.8 5E-19 1.7E-23 210.5 13.7 187 73-259 14-219 (844)
301 2v70_A SLIT-2, SLIT homolog 2 99.8 1.1E-18 3.6E-23 172.8 13.7 149 110-259 14-168 (220)
302 4ecn_A Leucine-rich repeat pro 99.8 2.3E-19 7.7E-24 210.6 10.3 158 99-259 440-634 (876)
303 3o6n_A APL1; leucine-rich repe 99.8 7.3E-19 2.5E-23 190.1 13.6 173 83-258 45-219 (390)
304 2o6q_A Variable lymphocyte rec 99.8 3.6E-18 1.2E-22 174.8 17.5 187 69-260 3-197 (270)
305 3t6q_A CD180 antigen; protein- 99.8 9.8E-19 3.4E-23 200.5 14.8 180 75-254 14-212 (606)
306 3zyj_A Leucine-rich repeat-con 99.8 1.5E-18 5.2E-23 190.7 15.6 174 83-258 88-269 (440)
307 3vq2_A TLR4, TOLL-like recepto 99.8 7.9E-19 2.7E-23 201.3 13.6 157 101-258 393-559 (606)
308 4b8c_D Glucose-repressible alc 99.8 3.9E-20 1.3E-24 215.1 2.2 193 40-243 130-336 (727)
309 3oja_A Leucine-rich immune mol 99.8 2.8E-19 9.4E-24 198.8 9.0 171 83-259 58-252 (487)
310 3zyi_A Leucine-rich repeat-con 99.8 1.6E-18 5.4E-23 191.3 14.8 174 83-258 99-280 (452)
311 3e6j_A Variable lymphocyte rec 99.8 2.6E-18 9E-23 171.1 14.9 151 109-260 21-175 (229)
312 2v9t_B SLIT homolog 2 protein 99.8 2.3E-18 7.8E-23 170.4 14.0 149 110-259 14-167 (220)
313 1h6u_A Internalin H; cell adhe 99.8 1.9E-18 6.4E-23 180.4 13.9 171 82-260 62-233 (308)
314 3t6q_A CD180 antigen; protein- 99.8 1.6E-18 5.6E-23 198.6 14.4 175 84-259 377-562 (606)
315 1xku_A Decorin; proteoglycan, 99.8 4.7E-18 1.6E-22 179.3 15.5 174 83-260 76-256 (330)
316 3oja_B Anopheles plasmodium-re 99.8 6.7E-18 2.3E-22 192.9 17.6 176 83-259 75-316 (597)
317 4ezg_A Putative uncharacterize 99.8 2.5E-18 8.4E-23 167.1 11.5 152 83-237 44-195 (197)
318 1zth_A RIO1 serine protein kin 99.8 1.4E-18 4.9E-23 176.3 9.8 140 412-565 49-219 (258)
319 3o6n_A APL1; leucine-rich repe 99.7 1.1E-17 3.8E-22 180.8 16.5 127 83-212 69-197 (390)
320 3a79_B TLR6, VLRB.59, TOLL-lik 99.7 4.9E-18 1.7E-22 192.8 14.3 177 84-261 277-490 (562)
321 3o53_A Protein LRIM1, AGAP0063 99.7 1.2E-18 4E-23 182.8 8.4 169 83-259 58-229 (317)
322 2o6s_A Variable lymphocyte rec 99.7 8.7E-18 3E-22 164.7 13.9 174 77-260 4-181 (208)
323 2xwt_C Thyrotropin receptor; s 99.7 3.6E-18 1.2E-22 171.4 11.4 170 83-255 55-237 (239)
324 2id5_A Lingo-1, leucine rich r 99.7 5.9E-18 2E-22 188.1 14.1 175 83-257 56-237 (477)
325 4g8a_A TOLL-like receptor 4; l 99.7 5.9E-18 2E-22 194.8 14.0 172 84-255 53-235 (635)
326 1ziw_A TOLL-like receptor 3; i 99.7 1.2E-17 4E-22 194.2 16.6 178 83-260 405-625 (680)
327 1h6t_A Internalin B; cell adhe 99.7 1.1E-17 3.6E-22 173.1 14.0 169 83-260 46-216 (291)
328 3o53_A Protein LRIM1, AGAP0063 99.7 1.9E-18 6.5E-23 181.2 8.5 169 82-259 79-252 (317)
329 2z80_A TOLL-like receptor 2, v 99.7 2.2E-18 7.6E-23 183.6 9.2 176 83-259 76-292 (353)
330 2z7x_B TOLL-like receptor 1, v 99.7 6.1E-18 2.1E-22 190.1 12.9 174 84-260 248-460 (520)
331 1p9a_G Platelet glycoprotein I 99.7 2.1E-17 7.3E-22 170.7 15.1 153 82-237 54-209 (290)
332 1h6u_A Internalin H; cell adhe 99.7 3.8E-17 1.3E-21 170.5 16.0 170 83-260 41-211 (308)
333 3cvr_A Invasion plasmid antige 99.7 2.5E-17 8.5E-22 184.8 15.5 155 83-258 80-244 (571)
334 2z63_A TOLL-like receptor 4, v 99.7 7.4E-18 2.5E-22 191.6 10.9 177 83-260 347-534 (570)
335 2z7x_B TOLL-like receptor 1, v 99.7 1.8E-17 6E-22 186.3 13.6 172 84-260 303-484 (520)
336 1w8a_A SLIT protein; signaling 99.7 1.8E-17 6E-22 160.3 11.7 131 110-241 11-144 (192)
337 3a79_B TLR6, VLRB.59, TOLL-lik 99.7 2.8E-17 9.7E-22 186.5 14.8 112 150-261 350-467 (562)
338 2z62_A TOLL-like receptor 4, v 99.7 3.7E-17 1.3E-21 167.7 13.8 161 98-260 21-193 (276)
339 2o6r_A Variable lymphocyte rec 99.7 2.8E-17 9.4E-22 156.7 11.7 136 69-217 3-140 (177)
340 2z63_A TOLL-like receptor 4, v 99.7 2.1E-17 7.2E-22 187.8 12.8 173 83-255 28-211 (570)
341 4ay9_X Follicle-stimulating ho 99.7 3.7E-17 1.3E-21 173.9 12.6 192 70-261 6-219 (350)
342 4g8a_A TOLL-like receptor 4; l 99.7 4.1E-17 1.4E-21 187.7 13.4 168 89-259 37-216 (635)
343 1o6v_A Internalin A; bacterial 99.7 6.6E-17 2.3E-21 179.0 14.3 166 83-257 199-366 (466)
344 1m9s_A Internalin B; cell inva 99.7 5.3E-17 1.8E-21 184.1 13.3 167 84-259 44-212 (605)
345 4ezg_A Putative uncharacterize 99.7 5.7E-17 2E-21 157.4 11.7 153 103-258 40-195 (197)
346 4glp_A Monocyte differentiatio 99.7 2.8E-17 9.7E-22 171.7 10.0 176 82-258 116-308 (310)
347 2z81_A CD282 antigen, TOLL-lik 99.7 6.7E-17 2.3E-21 182.9 13.9 175 78-257 2-185 (549)
348 1jl5_A Outer protein YOPM; leu 99.7 1.6E-16 5.5E-21 174.8 16.4 162 83-259 131-292 (454)
349 1h6t_A Internalin B; cell adhe 99.7 1.3E-16 4.4E-21 165.0 13.1 149 82-238 67-215 (291)
350 3bz5_A Internalin-J, INLJ; leu 99.7 4.1E-16 1.4E-20 171.6 16.9 163 83-257 42-204 (457)
351 1xeu_A Internalin C; cellular 99.7 1E-16 3.5E-21 163.1 10.4 146 83-237 41-186 (263)
352 3bz5_A Internalin-J, INLJ; leu 99.7 5.4E-16 1.9E-20 170.7 16.9 164 83-260 85-249 (457)
353 2xot_A Amphoterin-induced prot 99.7 3.1E-16 1.1E-20 167.4 14.5 150 110-260 21-179 (361)
354 1o6v_A Internalin A; bacterial 99.7 4.6E-16 1.6E-20 172.2 16.3 169 83-259 177-346 (466)
355 1m9s_A Internalin B; cell inva 99.7 4.6E-16 1.6E-20 176.4 16.2 157 82-246 64-220 (605)
356 2wfh_A SLIT homolog 2 protein 99.7 1.7E-16 5.9E-21 153.4 10.9 113 123-236 25-139 (193)
357 2wfh_A SLIT homolog 2 protein 99.7 3.3E-16 1.1E-20 151.4 12.8 125 88-216 15-141 (193)
358 1jl5_A Outer protein YOPM; leu 99.7 5E-17 1.7E-21 178.9 7.8 161 84-259 35-210 (454)
359 4fmz_A Internalin; leucine ric 99.7 5.3E-16 1.8E-20 164.7 14.5 169 84-260 156-327 (347)
360 2ell_A Acidic leucine-rich nuc 99.7 1.8E-16 6.3E-21 149.6 9.6 131 83-215 24-161 (168)
361 2o6r_A Variable lymphocyte rec 99.7 5.5E-16 1.9E-20 147.7 12.9 131 109-240 9-141 (177)
362 4fmz_A Internalin; leucine ric 99.7 5.1E-16 1.7E-20 164.8 13.8 168 82-257 176-346 (347)
363 2ca6_A RAN GTPase-activating p 99.7 6.3E-18 2.2E-22 182.4 -1.2 177 82-258 93-317 (386)
364 3g06_A SSPH2 (leucine-rich rep 99.6 3.1E-16 1E-20 178.1 12.2 176 60-258 12-195 (622)
365 2ell_A Acidic leucine-rich nuc 99.6 3E-16 1E-20 148.1 9.7 134 105-241 22-164 (168)
366 4gyi_A RIO2 kinase; protein ki 99.6 4.5E-17 1.6E-21 171.6 4.1 140 411-565 96-265 (397)
367 1xeu_A Internalin C; cellular 99.6 8.4E-16 2.9E-20 156.3 13.0 165 85-260 21-188 (263)
368 2je0_A Acidic leucine-rich nuc 99.6 1.9E-16 6.7E-21 146.2 6.9 128 83-210 17-149 (149)
369 1dce_A Protein (RAB geranylger 99.6 1.7E-17 6E-22 187.0 -2.5 169 85-259 351-548 (567)
370 2je0_A Acidic leucine-rich nuc 99.6 7.9E-16 2.7E-20 142.1 6.9 111 106-218 16-130 (149)
371 3g06_A SSPH2 (leucine-rich rep 99.6 7.8E-15 2.7E-19 166.6 15.8 38 223-261 221-258 (622)
372 3g39_A Variable lymphocyte rec 99.6 4.5E-15 1.5E-19 140.3 11.5 107 110-217 12-118 (170)
373 4b8c_D Glucose-repressible alc 99.6 2E-16 6.8E-21 183.9 2.6 154 88-246 206-364 (727)
374 3goz_A Leucine-rich repeat-con 99.6 1.7E-16 6E-21 169.5 1.3 176 83-258 22-239 (362)
375 2ast_B S-phase kinase-associat 99.6 7.3E-17 2.5E-21 170.5 -2.0 139 74-215 38-183 (336)
376 2ca6_A RAN GTPase-activating p 99.6 2.3E-16 8E-21 170.1 0.9 174 84-257 61-287 (386)
377 2r9u_A Variable lymphocyte rec 99.6 9.3E-15 3.2E-19 138.6 11.4 107 110-217 15-121 (174)
378 3goz_A Leucine-rich repeat-con 99.6 6.2E-16 2.1E-20 165.2 2.7 172 87-258 2-210 (362)
379 2ast_B S-phase kinase-associat 99.5 1E-15 3.5E-20 161.6 2.7 172 83-254 93-282 (336)
380 1a9n_A U2A', U2A'; complex (nu 99.5 6.4E-15 2.2E-19 140.1 7.0 130 103-236 15-153 (176)
381 1ds9_A Outer arm dynein; leuci 99.5 9.4E-17 3.2E-21 156.0 -6.7 130 84-218 19-157 (198)
382 1a9n_A U2A', U2A'; complex (nu 99.5 1.9E-14 6.4E-19 136.8 8.0 129 83-215 19-154 (176)
383 1dce_A Protein (RAB geranylger 99.5 1E-13 3.4E-18 156.3 12.6 161 84-250 373-566 (567)
384 1ds9_A Outer arm dynein; leuci 99.5 3.6E-16 1.2E-20 151.9 -7.2 134 103-241 14-158 (198)
385 3g39_A Variable lymphocyte rec 99.5 9.5E-14 3.3E-18 131.1 9.5 103 87-192 13-117 (170)
386 1z7x_W Ribonuclease inhibitor; 99.4 3.1E-15 1.1E-19 165.2 -3.3 174 84-257 200-411 (461)
387 1z7x_W Ribonuclease inhibitor; 99.4 6.4E-15 2.2E-19 162.7 -2.3 174 84-257 86-297 (461)
388 2r9u_A Variable lymphocyte rec 99.4 4.5E-13 1.5E-17 126.9 10.7 108 86-197 15-124 (174)
389 4ay9_X Follicle-stimulating ho 99.4 5.6E-13 1.9E-17 141.5 12.2 172 83-255 54-234 (350)
390 2ifg_A High affinity nerve gro 99.3 1.4E-12 4.8E-17 138.2 8.5 110 72-215 7-117 (347)
391 2ifg_A High affinity nerve gro 99.3 3.4E-12 1.2E-16 135.2 9.6 103 133-237 12-117 (347)
392 3un9_A NLR family member X1; l 99.2 1.5E-13 5.2E-18 146.6 -5.8 162 83-244 72-260 (372)
393 3tm0_A Aminoglycoside 3'-phosp 99.2 4.5E-11 1.5E-15 121.2 10.2 144 408-563 12-212 (263)
394 3un9_A NLR family member X1; l 99.1 4E-12 1.4E-16 135.6 -3.1 153 106-258 71-253 (372)
395 1nd4_A Aminoglycoside 3'-phosp 99.1 1.1E-10 3.8E-15 118.0 6.4 135 412-563 22-213 (264)
396 3sb4_A Hypothetical leucine ri 99.0 8.7E-10 3E-14 115.7 9.2 94 152-247 225-321 (329)
397 3dxp_A Putative acyl-COA dehyd 99.0 1.4E-09 4.6E-14 115.7 10.4 143 414-564 42-248 (359)
398 3ogk_B Coronatine-insensitive 99.0 6.4E-11 2.2E-15 134.9 -0.5 177 83-259 318-528 (592)
399 3sg8_A APH(2'')-ID; antibiotic 98.9 6.1E-10 2.1E-14 115.5 5.2 187 415-617 25-288 (304)
400 3ogk_B Coronatine-insensitive 98.9 4.5E-10 1.5E-14 127.9 3.9 166 85-252 140-350 (592)
401 3sb4_A Hypothetical leucine ri 98.8 5.1E-09 1.7E-13 109.8 9.3 144 83-229 101-327 (329)
402 3rw6_A Nuclear RNA export fact 98.8 3.3E-11 1.1E-15 121.0 -7.8 116 74-191 79-210 (267)
403 2p1m_B Transport inhibitor res 98.7 6.4E-10 2.2E-14 126.6 -2.1 128 82-210 104-244 (594)
404 2p1m_B Transport inhibitor res 98.7 2.2E-10 7.4E-15 130.6 -6.1 102 83-185 289-405 (594)
405 2ra8_A Uncharacterized protein 98.6 1.3E-08 4.5E-13 107.5 2.7 172 83-255 139-341 (362)
406 3r70_A Aminoglycoside phosphot 98.6 2.7E-07 9.1E-12 96.2 12.0 136 411-564 38-237 (320)
407 2ra8_A Uncharacterized protein 98.5 3.9E-08 1.3E-12 103.8 5.0 172 83-257 107-320 (362)
408 1io0_A Tropomodulin; LRR prote 98.5 3.8E-09 1.3E-13 100.7 -3.8 117 97-213 26-163 (185)
409 3rw6_A Nuclear RNA export fact 98.5 1.8E-08 6.1E-13 101.0 0.4 107 134-240 121-237 (267)
410 4fdw_A Leucine rich hypothetic 98.4 9.6E-07 3.3E-11 94.8 12.5 125 84-214 158-284 (401)
411 4fdw_A Leucine rich hypothetic 98.4 1.2E-06 4.2E-11 94.0 13.1 166 83-256 180-357 (401)
412 1io0_A Tropomodulin; LRR prote 98.4 3.3E-08 1.1E-12 94.2 -1.4 109 82-190 35-164 (185)
413 3tdw_A Gentamicin resistance p 98.3 3.9E-06 1.3E-10 86.7 13.3 136 415-564 24-224 (306)
414 4gkh_A Aminoglycoside 3'-phosp 98.3 4E-06 1.4E-10 84.8 11.7 134 417-563 31-222 (272)
415 3d1u_A Putative fructosamine-3 98.2 5.1E-06 1.7E-10 84.8 9.6 76 414-495 19-97 (288)
416 3ovc_A Hygromycin-B 4-O-kinase 98.1 8.1E-06 2.8E-10 86.3 10.6 75 414-496 45-122 (362)
417 2q83_A YTAA protein; 2635576, 98.0 7.3E-05 2.5E-09 78.2 14.4 141 416-563 38-251 (346)
418 3ats_A Putative uncharacterize 97.9 7.4E-05 2.5E-09 78.8 12.7 82 416-497 26-122 (357)
419 2pyw_A Uncharacterized protein 97.6 7.7E-05 2.6E-09 80.6 7.7 76 534-612 232-312 (420)
420 3jr1_A Putative fructosamine-3 97.6 0.00029 1E-08 72.4 11.6 139 415-560 41-232 (312)
421 3e4g_A ATP synthase subunit S, 97.5 1.4E-05 4.7E-10 74.3 0.3 85 130-214 62-153 (176)
422 3f7w_A Putative fructosamine-3 97.5 0.00029 9.8E-09 71.8 10.2 77 413-495 18-97 (288)
423 2olc_A MTR kinase, methylthior 97.5 0.00034 1.2E-08 74.9 10.6 77 415-493 35-120 (397)
424 1pgv_A TMD-1, tropomodulin TMD 97.5 6.5E-06 2.2E-10 78.0 -2.8 88 99-186 33-135 (197)
425 3rfe_A Platelet glycoprotein I 97.3 0.00028 9.7E-09 62.3 6.2 56 111-166 12-68 (130)
426 3e4g_A ATP synthase subunit S, 97.2 6.4E-05 2.2E-09 69.8 0.7 37 84-120 62-99 (176)
427 1pgv_A TMD-1, tropomodulin TMD 97.1 6E-05 2E-09 71.3 -0.3 110 81-190 39-170 (197)
428 4gt6_A Cell surface protein; l 97.1 0.0013 4.3E-08 70.3 9.7 132 100-235 258-390 (394)
429 3dxq_A Choline/ethanolamine ki 97.0 0.0018 6.1E-08 66.3 9.4 71 415-495 23-95 (301)
430 2ppq_A HSK, HK, homoserine kin 97.0 0.014 4.7E-07 60.1 15.9 143 416-563 28-216 (322)
431 1zyl_A Hypothetical protein YI 96.9 0.008 2.7E-07 62.1 13.5 143 416-564 32-223 (328)
432 3csv_A Aminoglycoside phosphot 96.9 0.0038 1.3E-07 64.7 10.9 32 534-565 183-218 (333)
433 2yle_A Protein spire homolog 1 96.8 0.0068 2.3E-07 57.6 10.2 102 493-614 33-134 (229)
434 3rfe_A Platelet glycoprotein I 96.7 0.0019 6.5E-08 56.9 5.9 56 157-214 12-68 (130)
435 4fs7_A Uncharacterized protein 96.6 0.0066 2.3E-07 64.6 10.5 157 84-249 231-390 (394)
436 3feg_A Choline/ethanolamine ki 96.5 0.008 2.7E-07 63.3 9.6 142 415-563 55-253 (379)
437 4fs7_A Uncharacterized protein 96.5 0.013 4.4E-07 62.3 11.4 124 83-212 71-219 (394)
438 4h09_A Hypothetical leucine ri 96.5 0.0088 3E-07 63.2 10.0 128 100-232 210-342 (379)
439 1nw1_A Choline kinase (49.2 KD 96.5 0.005 1.7E-07 66.4 8.1 73 415-495 78-159 (429)
440 3i1a_A Spectinomycin phosphotr 96.4 0.013 4.4E-07 61.0 10.5 31 534-564 206-236 (339)
441 2qg7_A Ethanolamine kinase PV0 96.3 0.013 4.6E-07 63.4 10.1 74 415-495 113-188 (458)
442 4gt6_A Cell surface protein; l 96.2 0.0085 2.9E-07 63.8 7.9 122 85-214 267-391 (394)
443 3c5i_A Choline kinase; choline 96.0 0.019 6.5E-07 60.4 9.7 73 416-495 39-121 (369)
444 4h09_A Hypothetical leucine ri 95.4 0.076 2.6E-06 55.9 11.3 131 102-236 189-322 (379)
445 3f2s_A CK, chetk-alpha, cholin 95.3 0.028 9.4E-07 59.5 7.5 145 415-563 57-279 (401)
446 2ks1_B Epidermal growth factor 95.0 0.033 1.1E-06 37.9 4.5 30 304-333 12-41 (44)
447 2k1k_A Ephrin type-A receptor 94.9 0.024 8.2E-07 37.3 3.5 30 300-329 8-37 (38)
448 2l2t_A Receptor tyrosine-prote 94.8 0.046 1.6E-06 37.1 4.8 32 303-334 10-41 (44)
449 3mes_A Choline kinase; malaria 93.5 0.38 1.3E-05 51.2 11.3 74 415-495 75-157 (424)
450 2jwa_A Receptor tyrosine-prote 93.1 0.11 3.6E-06 35.2 3.9 29 303-332 12-40 (44)
451 3g15_A CK, chetk-alpha, cholin 88.5 1 3.4E-05 47.6 8.4 28 536-563 246-279 (401)
452 4ano_A ESSB; membrane protein, 84.1 1.9 6.3E-05 41.0 6.7 115 466-617 48-163 (219)
453 3cxl_A N-chimerin; SH2, RHO-GA 82.8 0.18 6.3E-06 54.5 -1.0 62 415-479 147-215 (463)
454 4ann_A ESSB; membrane protein, 82.3 1.4 4.9E-05 41.6 5.1 116 466-617 43-158 (215)
455 2klu_A T-cell surface glycopro 76.7 4.7 0.00016 29.5 5.0 31 308-338 12-43 (70)
456 2l8s_A Integrin alpha-1; trans 71.3 6.3 0.00022 27.9 4.5 27 300-326 7-33 (54)
457 2k1a_A Integrin alpha-IIB; sin 67.2 6.4 0.00022 26.3 3.6 25 300-324 8-32 (42)
458 2l34_A TYRO protein tyrosine k 67.2 4.9 0.00017 25.4 2.9 26 301-326 5-30 (33)
459 2knc_A Integrin alpha-IIB; tra 64.2 7.7 0.00026 27.5 3.8 26 300-325 10-35 (54)
460 1iij_A ERBB-2 receptor protein 55.7 3.2 0.00011 26.5 0.5 25 305-330 10-34 (35)
461 2klu_A T-cell surface glycopro 51.7 9.5 0.00033 27.9 2.5 32 304-335 12-43 (70)
462 1afo_A Glycophorin A; integral 47.0 27 0.00093 22.6 3.8 28 304-331 11-38 (40)
463 2knc_B Integrin beta-3; transm 43.5 13 0.00044 28.8 2.4 22 303-324 11-32 (79)
464 2jp3_A FXYD domain-containing 41.1 19 0.00063 26.6 2.7 22 303-324 17-38 (67)
465 1cja_A Protein (actin-fragmin 37.6 1.1E+02 0.0037 30.8 8.7 80 482-565 156-238 (342)
466 2lz0_A Uncharacterized protein 36.1 86 0.003 25.2 6.5 38 147-185 14-51 (100)
467 2x6h_A GH13170P, VPS34, phosph 35.7 2.8E+02 0.0096 31.0 12.5 45 512-563 529-575 (696)
468 2k9j_B Integrin beta-3; transm 34.3 19 0.00066 24.2 1.8 22 303-324 10-31 (43)
469 3ls8_A Phosphatidylinositol 3- 34.1 5E+02 0.017 28.4 14.2 46 511-563 454-501 (614)
470 2l9u_A Receptor tyrosine-prote 33.6 34 0.0012 21.4 2.6 22 310-331 13-34 (40)
471 2jo1_A Phospholemman; FXYD1, N 32.5 51 0.0018 24.5 3.9 22 303-324 16-37 (72)
472 2lz0_A Uncharacterized protein 26.2 87 0.003 25.2 4.9 48 163-211 6-53 (100)
473 2zxe_G FXYD10, phospholemman-l 26.0 26 0.00088 26.3 1.4 21 303-323 19-39 (74)
474 2l2t_A Receptor tyrosine-prote 25.4 85 0.0029 21.1 3.7 20 316-335 20-39 (44)
475 2llm_A Amyloid beta A4 protein 29.2 17 0.00058 24.2 0.0 23 302-324 16-38 (43)
476 2ks1_B Epidermal growth factor 22.9 98 0.0033 20.8 3.6 15 318-332 29-43 (44)
477 2knc_B Integrin beta-3; transm 20.8 86 0.0029 24.1 3.5 25 304-328 9-33 (79)
No 1
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=8.7e-54 Score=443.23 Aligned_cols=264 Identities=25% Similarity=0.409 Sum_probs=212.7
Q ss_pred HHHhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 406 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
+...++|...+.||+|+||+||+|++. ..||||+++.........+.|.+|+.++++++|||||+++|++.+ +..+|
T Consensus 32 ei~~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~i 108 (307)
T 3omv_A 32 EIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAI 108 (307)
T ss_dssp BCCTTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEE
T ss_pred EEcHHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEE
Confidence 344567888999999999999999875 359999998666666777889999999999999999999998754 57899
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
|||||++|+|.++++. ....+++.++..|+.|||.||+|||++ +||||||||+|||+++++.+||+|||+|+..
T Consensus 109 VmEy~~gGsL~~~l~~---~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 182 (307)
T 3omv_A 109 VTQWCEGSSLYKHLHV---QETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVK 182 (307)
T ss_dssp EEECCSSCBHHHHHHT---SCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-
T ss_pred EEEcCCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceec
Confidence 9999999999999973 346799999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCC-ccccccccccccccCcccccc---CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHH
Q 005001 566 PNTE-RQVSTQMVGAFGYSAPEFALS---GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDAL 641 (720)
Q Consensus 566 ~~~~-~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (720)
.... .......+||+.|||||++.+ +.|+.++|||||||++|||+||+.||........... .+
T Consensus 183 ~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~------------~~ 250 (307)
T 3omv_A 183 SRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIF------------MV 250 (307)
T ss_dssp -----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHH------------HH
T ss_pred ccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHH------------HH
Confidence 4332 223345689999999999964 4589999999999999999999999986544221111 01
Q ss_pred HhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHH
Q 005001 642 AKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLV 690 (720)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~ 690 (720)
.+..........+..++..+.+||.+||+.||++|||+.||++.|+.+.
T Consensus 251 ~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~ 299 (307)
T 3omv_A 251 GRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp HTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred hcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 1111111112345567788999999999999999999999999998764
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=4.2e-54 Score=445.69 Aligned_cols=262 Identities=24% Similarity=0.417 Sum_probs=218.4
Q ss_pred cCCCccceeccCCCcEEEEEEEc------CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (720)
++|...+.||+|+||+||+|++. ++..||||+++.. .....++|.+|++++++++|||||+++|++.+.+..
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 90 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL 90 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC--ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence 56778889999999999999864 4788999999754 455677899999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhcc---------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCce
Q 005001 484 LLVYEYVGNGNLHDMLHFAD---------DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNP 554 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~---------~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~ 554 (720)
++|||||++|+|.++++... .....+++.++..++.||++||+|||++ +||||||||+|||++.++.+
T Consensus 91 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~ 167 (299)
T 4asz_A 91 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLV 167 (299)
T ss_dssp EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcE
Confidence 99999999999999997532 2345799999999999999999999999 99999999999999999999
Q ss_pred EEcccCCCccCCCCCcc-ccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhc
Q 005001 555 HLSDCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWAT 632 (720)
Q Consensus 555 kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~ 632 (720)
||+|||+|+........ ......||+.|||||++.+..|+.++|||||||++|||+| |+.||.......
T Consensus 168 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~--------- 238 (299)
T 4asz_A 168 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE--------- 238 (299)
T ss_dssp EECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH---------
T ss_pred EECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---------
Confidence 99999999865443322 2234579999999999999999999999999999999999 899997643221
Q ss_pred cccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 633 PQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
.+.. +........|..++.++.+||.+||+.||++|||++||.+.|+++.+..
T Consensus 239 -------~~~~-i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~ 291 (299)
T 4asz_A 239 -------VIEC-ITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKAS 291 (299)
T ss_dssp -------HHHH-HHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred -------HHHH-HHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence 1111 1112223456778889999999999999999999999999999886543
No 3
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=2.3e-53 Score=446.25 Aligned_cols=261 Identities=27% Similarity=0.428 Sum_probs=212.5
Q ss_pred cCCCccceeccCCCcEEEEEEEc------CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (720)
++|...+.||+|+||+||+|++. +++.||||+++.. .....++|.+|++++++++|||||+++|++.+.+..
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 118 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL 118 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 45667789999999999999864 4788999999754 455667899999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhccC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCC
Q 005001 484 LLVYEYVGNGNLHDMLHFADD-----------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL 552 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~-----------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~ 552 (720)
+||||||++|+|.++++.... ....+++.++..|+.||++||+|||+. +||||||||+|||++.++
T Consensus 119 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~ 195 (329)
T 4aoj_A 119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGL 195 (329)
T ss_dssp EEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTT
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCC
Confidence 999999999999999975332 235699999999999999999999999 999999999999999999
Q ss_pred ceEEcccCCCccCCCCCc-cccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHh
Q 005001 553 NPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRW 630 (720)
Q Consensus 553 ~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~ 630 (720)
.+||+|||+++....... .......||+.|||||++.+..|+.++|||||||++|||+| |+.||.......
T Consensus 196 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~------- 268 (329)
T 4aoj_A 196 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE------- 268 (329)
T ss_dssp EEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH-------
T ss_pred cEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH-------
Confidence 999999999986644332 22345679999999999999999999999999999999999 899997643221
Q ss_pred hccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHh
Q 005001 631 ATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQR 692 (720)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~ 692 (720)
.+.. +....+...|..++.++.+||.+||+.||++|||++||+++|+.+.+.
T Consensus 269 ---------~~~~-i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 269 ---------AIDC-ITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp ---------HHHH-HHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred ---------HHHH-HHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 1111 111223345677888999999999999999999999999999998664
No 4
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.2e-53 Score=444.30 Aligned_cols=258 Identities=23% Similarity=0.399 Sum_probs=214.6
Q ss_pred CCCccceeccCCCcEEEEEEEc------CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (720)
+++..+.||+|+||+||+|.+. +++.||||+++... .....++|.+|+.++++++|||||+++|++.+.+..+
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 4556778999999999999863 46889999997543 3345678999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhhccC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCC
Q 005001 485 LVYEYVGNGNLHDMLHFADD------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL 552 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~ 552 (720)
+|||||++|+|.++++.... ....+++.++..++.|||+||+|||++ +||||||||+|||+++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCC
Confidence 99999999999999964321 124689999999999999999999999 999999999999999999
Q ss_pred ceEEcccCCCccCCCCCc-cccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHh
Q 005001 553 NPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRW 630 (720)
Q Consensus 553 ~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~ 630 (720)
.+||+|||+++....... .......||+.|||||++.++.|+.++|||||||++|||+| |+.||.+.....
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~------- 255 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD------- 255 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHH-------
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHH-------
Confidence 999999999986543322 22344679999999999999999999999999999999999 899997654211
Q ss_pred hccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 005001 631 ATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRL 689 (720)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~ 689 (720)
+...+........|..++..+.+||.+||+.||++|||++||+++|+.+
T Consensus 256 ----------~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 256 ----------VVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp ----------HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred ----------HHHHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 1111222233345677888999999999999999999999999999754
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.4e-53 Score=447.75 Aligned_cols=253 Identities=22% Similarity=0.388 Sum_probs=210.6
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
++|++.+.||+|+||+||+|++. +|+.||||++..........+.+.+|++++++++|||||++++++.+++..|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 57999999999999999999875 69999999998776666777889999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
||+||+|.++++.. ....+++.+++.++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.....
T Consensus 104 y~~gg~L~~~i~~~--~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 104 YCEGGDLFKRINAQ--KGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp CCTTCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred CCCCCcHHHHHHHc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 99999999999632 345689999999999999999999999 9999999999999999999999999999876432
Q ss_pred CccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccc
Q 005001 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPA 648 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (720)
.......+||+.|||||++.+..|+.++|||||||++|||+||+.||.+..... .+.++....
T Consensus 179 -~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~----------------~~~~i~~~~ 241 (350)
T 4b9d_A 179 -VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN----------------LVLKIISGS 241 (350)
T ss_dssp -HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH----------------HHHHHHHTC
T ss_pred -cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH----------------HHHHHHcCC
Confidence 122345689999999999999999999999999999999999999998654221 111222111
Q ss_pred cCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 649 LNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 649 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
. ...+...+.++.+||.+||+.||++|||++|++++
T Consensus 242 ~-~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 242 F-PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp C-CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred C-CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1 12344567789999999999999999999999875
No 6
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=3.3e-52 Score=440.95 Aligned_cols=272 Identities=24% Similarity=0.395 Sum_probs=225.8
Q ss_pred hcHHHHhcCCCccceeccCCCcEEEEEEEcC------CcEEEEEEccccccChHHHHHHHHHHHHhhcCCC-CCccccce
Q 005001 403 ASLQTATNSFSQEFLIGEGSLGRVYRAEFAN------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH-PNIVTLAG 475 (720)
Q Consensus 403 ~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~ 475 (720)
..++...++|+..+.||+|+||+||+|.+.. ++.||||++.... .....+.|.+|+.++.+++| ||||+++|
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~-~~~~~~~~~~E~~il~~l~hhpnIV~l~g 135 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLG 135 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc-ChHHHHHHHHHHHHHHHcCCCCcEEEEEE
Confidence 3455567889999999999999999997653 3689999997544 34456789999999999965 99999999
Q ss_pred EEeec-CeEEEEEEecCCCCHHHHhhhccC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCC
Q 005001 476 YCAEH-GQRLLVYEYVGNGNLHDMLHFADD------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFK 542 (720)
Q Consensus 476 ~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlk 542 (720)
+|.+. +..++|||||++|+|.++|+.... ....+++.++..++.|||+||+|||++ +|||||||
T Consensus 136 ~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK 212 (353)
T 4ase_A 136 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLA 212 (353)
T ss_dssp EECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred EEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccC
Confidence 98764 568999999999999999975332 134589999999999999999999999 99999999
Q ss_pred CCCEEeCCCCceEEcccCCCccCCCCCcc-ccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCC
Q 005001 543 SANILLDDELNPHLSDCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSR 620 (720)
Q Consensus 543 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~ 620 (720)
|+|||+++++.+||+|||+|+........ ......||+.|||||++.+..|+.++|||||||++|||+| |+.||.+..
T Consensus 213 ~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~ 292 (353)
T 4ase_A 213 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 292 (353)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred ccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999876544332 3345679999999999999999999999999999999998 999998654
Q ss_pred CcchhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhc
Q 005001 621 PRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRAS 694 (720)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 694 (720)
... .+.+.+....+...|..++.++.++|.+||+.||++|||+.||+++|+++++..+
T Consensus 293 ~~~----------------~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~~ 350 (353)
T 4ase_A 293 IDE----------------EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 350 (353)
T ss_dssp CSH----------------HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred HHH----------------HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHhh
Confidence 321 1222222333445567778899999999999999999999999999999987543
No 7
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=3.9e-52 Score=427.79 Aligned_cols=249 Identities=23% Similarity=0.382 Sum_probs=203.6
Q ss_pred CccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEee----cCeEEEEE
Q 005001 413 SQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE----HGQRLLVY 487 (720)
Q Consensus 413 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lV~ 487 (720)
+..+.||+|+||+||+|.+. ++..||+|++..........+.|.+|++++++++|||||++++++.+ ++..|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 55678999999999999775 68899999998776677777889999999999999999999999865 34689999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC-CCceEEcccCCCccCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD-ELNPHLSDCGLAALTP 566 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~ 566 (720)
|||++|+|.++++. .+.+++..+..++.||+.||+|||++. ++||||||||+|||++. ++.+||+|||+|+...
T Consensus 109 Ey~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 109 ELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp ECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred eCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 99999999999973 467999999999999999999999981 13999999999999974 7999999999998643
Q ss_pred CCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
.. .....+||+.|||||++.+ .|+.++|||||||++|||+||+.||......... ...+..
T Consensus 184 ~~---~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~---------------~~~i~~ 244 (290)
T 3fpq_A 184 AS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI---------------YRRVTS 244 (290)
T ss_dssp TT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHH---------------HHHHTT
T ss_pred CC---ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHH---------------HHHHHc
Confidence 32 3345689999999998865 6999999999999999999999999754332111 111111
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.......+...+.++.+||.+||+.||++|||++|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 245 GVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp TCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 111111233345678999999999999999999999864
No 8
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=3.6e-52 Score=435.16 Aligned_cols=256 Identities=23% Similarity=0.257 Sum_probs=211.9
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
+.|+..++||+|+||+||+|++. +|+.||||+++.... ..+|+.+++.++|||||++++++.+.+..|||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmE 130 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFME 130 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 45778889999999999999875 689999999975432 2468999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCC-ceEEcccCCCccCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL-NPHLSDCGLAALTPN 567 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~~~ 567 (720)
||+||+|.++++. .+.+++.++..++.||+.||+|||++ +||||||||+|||++.+| ++||+|||+|+....
T Consensus 131 y~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~ 203 (336)
T 4g3f_A 131 LLEGGSLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 203 (336)
T ss_dssp CCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC--
T ss_pred ccCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccC
Confidence 9999999999973 46799999999999999999999999 999999999999999987 699999999987654
Q ss_pred CCcc----ccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHh
Q 005001 568 TERQ----VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAK 643 (720)
Q Consensus 568 ~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (720)
.... .....+||+.|||||++.+..|+.++|||||||++|||+||+.||...........+...
T Consensus 204 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~------------ 271 (336)
T 4g3f_A 204 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASE------------ 271 (336)
T ss_dssp ----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHS------------
T ss_pred CCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcC------------
Confidence 3221 123457999999999999999999999999999999999999999865543222111100
Q ss_pred hcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhc
Q 005001 644 MVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRAS 694 (720)
Q Consensus 644 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 694 (720)
+......+..++..+.++|.+||+.||++|||+.|++++|.+.+....
T Consensus 272 ---~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~ 319 (336)
T 4g3f_A 272 ---PPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVG 319 (336)
T ss_dssp ---CCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred ---CCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhh
Confidence 000112355677889999999999999999999999999988876543
No 9
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.6e-52 Score=437.55 Aligned_cols=251 Identities=25% Similarity=0.361 Sum_probs=211.4
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
...|+..+.||+|+||+||+|.+. +|+.||||++..... ...+.+.+|+.++++++|||||++++++.+++..||||
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm 150 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 150 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 356888999999999999999875 699999999965432 23456789999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
|||+||+|.++++ ...+++.++..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+....
T Consensus 151 Ey~~gg~L~~~l~-----~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 222 (346)
T 4fih_A 151 EFLEGGALTDIVT-----HTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 222 (346)
T ss_dssp CCCTTEEHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred eCCCCCcHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCC
Confidence 9999999999997 35699999999999999999999999 999999999999999999999999999987654
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
.. ......+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.........+ .....
T Consensus 223 ~~-~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i-------------~~~~~- 287 (346)
T 4fih_A 223 EV-PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-------------RDNLP- 287 (346)
T ss_dssp SS-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-------------HHSSC-
T ss_pred CC-CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH-------------HcCCC-
Confidence 32 2334578999999999999999999999999999999999999999764332111111 11111
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.....+...+.++.+||.+||+.||++|||++|++++
T Consensus 288 -~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 288 -PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp -CCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -CCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1112334567789999999999999999999999875
No 10
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.6e-52 Score=432.57 Aligned_cols=260 Identities=22% Similarity=0.317 Sum_probs=217.8
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
++|++.+.||+|+||+||+|++. +|+.||+|++.+... .....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 46899999999999999999775 689999999975433 2234577899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||++||+|.++++. .+.+++.++..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+....
T Consensus 112 Ey~~gG~L~~~i~~----~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 112 SYAKNGELLKYIRK----IGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp CCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 99999999999973 46799999999999999999999999 999999999999999999999999999987654
Q ss_pred CC-ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 568 TE-RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 568 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
.. .......+||+.|||||++.+..|+.++||||+||++|||+||+.||.+.+... .+.++..
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~----------------~~~~i~~ 248 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL----------------IFAKIIK 248 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH----------------HHHHHHH
T ss_pred CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH----------------HHHHHHc
Confidence 32 233456789999999999999999999999999999999999999997643211 1122222
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhcc
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 695 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~~ 695 (720)
.. ..+|...+.++.+||.+||+.||++|||++|++.+ ..+.++...
T Consensus 249 ~~--~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~-~~i~~Hp~F 294 (311)
T 4aw0_A 249 LE--YDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY-GPLKAHPFF 294 (311)
T ss_dssp TC--CCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCH-HHHHTSGGG
T ss_pred CC--CCCCcccCHHHHHHHHHHccCCHhHCcChHHHcCC-HHHHCCCCc
Confidence 22 23455667789999999999999999999998654 344454443
No 11
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.5e-51 Score=416.93 Aligned_cols=248 Identities=26% Similarity=0.405 Sum_probs=195.7
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccC-hHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
++|++.+.||+|+||+||+|.+. +|+.||+|++...... ......+.+|++++++++||||+++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 57999999999999999999764 6999999999765433 333567899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+ +|+|.+++.. .+.+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+....
T Consensus 93 Ey~-~g~L~~~l~~----~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 93 EYA-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHHH----SCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred eCC-CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 999 6799999863 46799999999999999999999999 999999999999999999999999999986543
Q ss_pred CCccccccccccccccCccccccCCC-cccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIY-TVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
.. .....+||+.|||||++.+..+ +.++||||+||++|||+||+.||....... ...++..
T Consensus 165 ~~--~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~----------------~~~~i~~ 226 (275)
T 3hyh_A 165 GN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV----------------LFKNISN 226 (275)
T ss_dssp ------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----------------HHHHHHH
T ss_pred CC--ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHH----------------HHHHHHc
Confidence 22 2345689999999999999886 579999999999999999999997643211 1111111
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.. ..+|...+.++.+|+.+||+.||++|||++|++++
T Consensus 227 ~~--~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 227 GV--YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp TC--CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred CC--CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 11 12455567789999999999999999999999975
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=3.3e-51 Score=439.62 Aligned_cols=251 Identities=25% Similarity=0.374 Sum_probs=211.8
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.+.|+..+.||+|+||.||+|.+. +|+.||||++..... ...+.+.+|+.+|+.++|||||+++++|.+.+.+||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm 227 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 227 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC--SSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch--hHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence 467999999999999999999875 699999999965432 23456889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
|||+||+|.++++ ...+++.++..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+....
T Consensus 228 Ey~~gG~L~~~i~-----~~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~ 299 (423)
T 4fie_A 228 EFLEGGALTDIVT-----HTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 299 (423)
T ss_dssp ECCTTEEHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCS
T ss_pred eCCCCCcHHHHHh-----ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCC
Confidence 9999999999996 35699999999999999999999999 999999999999999999999999999987654
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
.. ......+||+.|||||++.+..|+.++|||||||++|||++|+.||.+......... +.....+
T Consensus 300 ~~-~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~-------------i~~~~~~ 365 (423)
T 4fie_A 300 EV-PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM-------------IRDNLPP 365 (423)
T ss_dssp SC-CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-------------HHHSCCC
T ss_pred CC-ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-------------HHcCCCC
Confidence 32 234457899999999999999999999999999999999999999976443211111 1111111
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
....+...+.++.+||.+||+.||++|||+.|++++
T Consensus 366 --~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 366 --RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp --CCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred --CCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 112234566789999999999999999999999875
No 13
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=4.5e-52 Score=429.30 Aligned_cols=244 Identities=24% Similarity=0.355 Sum_probs=200.7
Q ss_pred cCCCccceeccCCCcEEEEEEEc----CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
++|++.+.||+|+||+||+|+.. +++.||+|++............+.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 56899999999999999999763 47899999997665444445568899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
|||||+||+|.++++. .+.+++.++..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+..
T Consensus 104 vmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSK----EVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EECCCTTCEEHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEcCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 9999999999999973 46799999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
.... ......+||+.|||||++.+..|+.++||||+||++|||+||+.||.+.+... .+.++.
T Consensus 177 ~~~~-~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~----------------~~~~i~ 239 (304)
T 3ubd_A 177 IDHE-KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE----------------TMTMIL 239 (304)
T ss_dssp -----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----------------HHHHHH
T ss_pred cCCC-ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH----------------HHHHHH
Confidence 4322 22345789999999999999999999999999999999999999998643321 111122
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCH
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPM 679 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 679 (720)
... ..+|...+.++.+||.+||+.||++|||+
T Consensus 240 ~~~--~~~p~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 240 KAK--LGMPQFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp HCC--CCCCTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred cCC--CCCCCcCCHHHHHHHHHHcccCHHHCCCC
Confidence 111 23455677889999999999999999995
No 14
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.3e-50 Score=422.34 Aligned_cols=273 Identities=24% Similarity=0.336 Sum_probs=205.7
Q ss_pred cCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecC----eEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG----QRLL 485 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~l 485 (720)
++|...+.||+|+||+||+|++ +|+.||||++.... .....+..|+..+.+++|||||++++++.+.+ .++|
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~l 78 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEE
Confidence 4567788999999999999988 58999999996432 12222344666677889999999999998754 5799
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCcEEecCCCCCEEeCCCCceEEcccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV-----CLPSVVHRNFKSANILLDDELNPHLSDCG 560 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-----~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 560 (720)
|||||++|+|.++++ ...+++..+.+++.|++.||+|||++ +.++||||||||+|||++.++.+||+|||
T Consensus 79 V~Ey~~~gsL~~~l~-----~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFG 153 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp EEECCTTCBHHHHHH-----HCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred EecCCCCCcHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCC
Confidence 999999999999997 35689999999999999999999975 23589999999999999999999999999
Q ss_pred CCccCCCCCccc---cccccccccccCccccccC------CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhh
Q 005001 561 LAALTPNTERQV---STQMVGAFGYSAPEFALSG------IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWA 631 (720)
Q Consensus 561 ~a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~ 631 (720)
+|+......... ....+||+.|||||++.+. .++.++|||||||++|||+||..||......... ....
T Consensus 154 la~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p-~~~~- 231 (303)
T 3hmm_A 154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP-YYDL- 231 (303)
T ss_dssp TCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCT-TTTT-
T ss_pred CCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCcccccccc-chhc-
Confidence 998765433222 2345799999999999764 4788999999999999999998887543321110 0000
Q ss_pred ccccccHHHHHh-hcccccCCCCC-----hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 632 TPQLHDIDALAK-MVDPALNGMYP-----AKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 632 ~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
.+.......+.+ ......+...| ..++..+.+||.+||+.||++||||.||++.|+++.++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 232 VPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp SCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred ccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 011111222222 22233333333 245678999999999999999999999999999987653
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=6.2e-49 Score=407.66 Aligned_cols=249 Identities=22% Similarity=0.370 Sum_probs=190.0
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecC-------
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG------- 481 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------- 481 (720)
++|+..+.||+|+||+||+|++. +|+.||||+++... .....+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 45889999999999999999875 68999999996543 3445577899999999999999999999987654
Q ss_pred -----eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEE
Q 005001 482 -----QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHL 556 (720)
Q Consensus 482 -----~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl 556 (720)
..|+|||||++|+|.++++... ......+..++.++.||+.||+|||++ +||||||||+|||++.++.+||
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl 159 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRC-TIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKV 159 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCC-SGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcC-CCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEE
Confidence 3699999999999999997321 123456777899999999999999999 9999999999999999999999
Q ss_pred cccCCCccCCCCCcc-----------ccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchh
Q 005001 557 SDCGLAALTPNTERQ-----------VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQ 625 (720)
Q Consensus 557 ~Dfg~a~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~ 625 (720)
+|||+|+........ .....+||+.|||||++.+..|+.++|||||||++|||++ ||..... .
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~---~ 233 (299)
T 4g31_A 160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME---R 233 (299)
T ss_dssp CCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH---H
T ss_pred ccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH---H
Confidence 999999876543211 1234579999999999999999999999999999999996 7753110 0
Q ss_pred hHHHhhccccccHHHHHhhcccccCCCCCh---hHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 626 SLVRWATPQLHDIDALAKMVDPALNGMYPA---KSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
...+.... ...+|. .....+.+|+.+||+.||++|||+.|++++
T Consensus 234 ------------~~~~~~~~----~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 234 ------------VRTLTDVR----NLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp ------------HHHHHHHH----TTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ------------HHHHHHHh----cCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 01111111 112222 233456789999999999999999999864
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.3e-48 Score=414.00 Aligned_cols=269 Identities=23% Similarity=0.342 Sum_probs=209.7
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEee------cC
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE------HG 481 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~ 481 (720)
.++|++.+.||+|+||+||+|.+. +|+.||||+++...........+.+|+++|+.++|||||++++++.. .+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 357999999999999999999775 79999999998766666667788999999999999999999998754 36
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCC
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 561 (720)
..|+|||||+ |+|.+++. ..+.+++.++..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+
T Consensus 133 ~~~ivmE~~~-g~L~~~i~----~~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIH----SSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp CEEEEEECCS-EEHHHHHT----SSSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEEeCCC-CCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecce
Confidence 7899999996 68999986 357899999999999999999999999 999999999999999999999999999
Q ss_pred CccCCCCC---ccccccccccccccCccccccCC-CcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHh--hcccc
Q 005001 562 AALTPNTE---RQVSTQMVGAFGYSAPEFALSGI-YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRW--ATPQL 635 (720)
Q Consensus 562 a~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~--~~~~~ 635 (720)
|+...... .......+||+.|||||++.+.. ++.++||||+||++|||++|+.||.+.+.......+.. ..+..
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~ 284 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSP 284 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCG
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence 98664322 22334578999999999988754 69999999999999999999999987654333222211 11111
Q ss_pred ccHH-----HHHhhccc-ccCCCCC-----hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 636 HDID-----ALAKMVDP-ALNGMYP-----AKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 636 ~~~~-----~~~~~~~~-~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.... ........ ......+ ...+.++.+||.+||+.||++|||+.|++++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 285 AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp GGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000 00000000 0000011 1235678899999999999999999999876
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.3e-46 Score=400.87 Aligned_cols=267 Identities=22% Similarity=0.302 Sum_probs=202.5
Q ss_pred HHHHhcCCCccceeccCCCcEEEEEEEc----CCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEee
Q 005001 405 LQTATNSFSQEFLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAE 479 (720)
Q Consensus 405 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 479 (720)
+....++|++.+.||+|+||+||+|+.+ .++.||+|++.... ....+.+|+++++.+ +||||+++++++.+
T Consensus 16 ~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~ 91 (361)
T 4f9c_A 16 VPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS----HPIRIAAELQCLTVAGGQDNVMGVKYCFRK 91 (361)
T ss_dssp SGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE
T ss_pred cCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc----CHHHHHHHHHHHHHhcCCCCCceEEEEEEE
Confidence 3445688999999999999999999764 46889999986532 345678899999988 69999999999999
Q ss_pred cCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCC-CceEEcc
Q 005001 480 HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE-LNPHLSD 558 (720)
Q Consensus 480 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~-~~~kl~D 558 (720)
.++.|+||||+++|+|.++++ .+++.++..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|
T Consensus 92 ~~~~~lvmE~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~D 161 (361)
T 4f9c_A 92 NDHVVIAMPYLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVD 161 (361)
T ss_dssp TTEEEEEEECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECC
T ss_pred CCEEEEEEeCCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECc
Confidence 999999999999999999884 489999999999999999999999 99999999999999876 7999999
Q ss_pred cCCCccCCCCCc---------------------------cccccccccccccCccccccC-CCcccchhhhHHHHHHHHH
Q 005001 559 CGLAALTPNTER---------------------------QVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELL 610 (720)
Q Consensus 559 fg~a~~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~ell 610 (720)
||+|+....... ......+||+.|||||++.+. .|+.++||||+||++|||+
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell 241 (361)
T 4f9c_A 162 FGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLL 241 (361)
T ss_dssp CTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHH
T ss_pred CCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHH
Confidence 999976543211 112335799999999999876 4899999999999999999
Q ss_pred hCCCCCCCCCCcchh-hHHHhh--cc-------------------ccccHHHH-Hhhc--cc------------ccCCCC
Q 005001 611 TGRKPLDSSRPRSEQ-SLVRWA--TP-------------------QLHDIDAL-AKMV--DP------------ALNGMY 653 (720)
Q Consensus 611 tg~~pf~~~~~~~~~-~~~~~~--~~-------------------~~~~~~~~-~~~~--~~------------~~~~~~ 653 (720)
+|+.||......... ..+... .+ ........ .+.. +. ......
T Consensus 242 ~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 321 (361)
T 4f9c_A 242 SGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEG 321 (361)
T ss_dssp HTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------
T ss_pred HCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccc
Confidence 999999765432211 111000 00 00000000 0000 00 000011
Q ss_pred ChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 654 PAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 654 ~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
....++++.+|+.+||+.||++|||++|++++
T Consensus 322 ~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~H 353 (361)
T 4f9c_A 322 WNEVPDEAYDLLDKLLDLNPASRITAEEALLH 353 (361)
T ss_dssp CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred cccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 12345678899999999999999999999865
No 18
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=6.4e-46 Score=415.83 Aligned_cols=252 Identities=26% Similarity=0.333 Sum_probs=206.2
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccCh-HHHHHH---HHHHHHhhcCCCCCccccceEEeecCeE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL-QEEDNF---LEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~---~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (720)
.++|++.++||+|+||+||+|++. +|+.||+|++.+..... ...... .+++.+++.++|||||+++++|.+.+.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 367999999999999999999775 69999999997543321 112223 3446777888999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
|+||||++||+|.+++.. .+.+++..++.++.||+.||+|||++ +||||||||+|||++.+|++||+|||+|+
T Consensus 268 ylVmEy~~GGdL~~~l~~----~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQ----HGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp EEEECCCCSCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceee
Confidence 999999999999999973 46799999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 564 LTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
..... .....+||+.|||||++.+ ..|+.++|||||||++|||++|+.||.+........+ ..
T Consensus 341 ~~~~~---~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i-------------~~ 404 (689)
T 3v5w_A 341 DFSKK---KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI-------------DR 404 (689)
T ss_dssp ECSSC---CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHH-------------HH
T ss_pred ecCCC---CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH-------------HH
Confidence 76433 2345689999999999975 5799999999999999999999999975433221111 11
Q ss_pred hhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHH
Q 005001 643 KMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPP-----MSEVVQA 685 (720)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~ell~~ 685 (720)
.+... ...+|...+.++.+||.+||+.||++|++ ++||+++
T Consensus 405 ~i~~~--~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 405 MTLTM--AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp HHHHC--CCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred hhcCC--CCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 11111 12345667788999999999999999998 6888765
No 19
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=5.3e-45 Score=385.11 Aligned_cols=287 Identities=36% Similarity=0.666 Sum_probs=236.3
Q ss_pred cchhcHHHHhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEee
Q 005001 400 YTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE 479 (720)
Q Consensus 400 ~~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 479 (720)
+...++....++|+..+.||+|+||.||+|.+.+++.||+|++.... ....+.+.+|+.+++.++||||+++++++..
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 106 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES--SQGIEEFETEIETLSFCRHPHLVSLIGFCDE 106 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC--SSHHHHHHHHHHGGGSCCCTTBCCEEEECCC
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC
Confidence 44556667889999999999999999999998889999999987543 3346778999999999999999999999999
Q ss_pred cCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEccc
Q 005001 480 HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDC 559 (720)
Q Consensus 480 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Df 559 (720)
.+..++||||+++|+|.+++.........+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 107 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Df 183 (321)
T 2qkw_B 107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDF 183 (321)
T ss_dssp TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCC
T ss_pred CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeec
Confidence 9999999999999999999975444445799999999999999999999999 9999999999999999999999999
Q ss_pred CCCccCCCCC-ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccH
Q 005001 560 GLAALTPNTE-RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDI 638 (720)
Q Consensus 560 g~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 638 (720)
|++....... ........||+.|+|||++.+..++.++|||||||++|||++|+.||....+........|.... ...
T Consensus 184 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~-~~~ 262 (321)
T 2qkw_B 184 GISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES-HNN 262 (321)
T ss_dssp TTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHH-HTT
T ss_pred ccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhc-ccc
Confidence 9997654322 22233456999999999999999999999999999999999999999876654433333332110 001
Q ss_pred HHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHh
Q 005001 639 DALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQR 692 (720)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~ 692 (720)
..+...+++......+...+..+.+++.+||+.||++||++.|++++|+.+++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 263 GQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp TCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred ccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 112233344445556778889999999999999999999999999999988754
No 20
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=5.3e-45 Score=385.92 Aligned_cols=290 Identities=36% Similarity=0.668 Sum_probs=238.0
Q ss_pred ccccchhcHHHHhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceE
Q 005001 397 ATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY 476 (720)
Q Consensus 397 ~~~~~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~ 476 (720)
...++..++....++|+..+.||+|+||.||+|...+|+.||+|++...... .....+.+|+.+++.++||||++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc-hHHHHHHHHHHHHHhccCCCccceEEE
Confidence 3456778899999999999999999999999999888999999999754322 223368899999999999999999999
Q ss_pred EeecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEE
Q 005001 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHL 556 (720)
Q Consensus 477 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl 556 (720)
+...+..++||||+++|+|.++++........+++..+..++.|++.||+|||+.+.++|+||||||+|||++.++.+||
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 99999999999999999999999865555567999999999999999999999986678999999999999999999999
Q ss_pred cccCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCC--CcchhhHHHhhccc
Q 005001 557 SDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSR--PRSEQSLVRWATPQ 634 (720)
Q Consensus 557 ~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~--~~~~~~~~~~~~~~ 634 (720)
+|||++...............||+.|+|||++.+..++.++|||||||++|||++|+.||.... .........|....
T Consensus 176 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 255 (326)
T 3uim_A 176 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255 (326)
T ss_dssp CCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTT
T ss_pred ccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHH
Confidence 9999998776555444555679999999999999999999999999999999999999996321 01111122222211
Q ss_pred cccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 005001 635 LHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVR 688 (720)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~ 688 (720)
. .........+.......+...+..+.+++.+||+.||++|||+.|++++|++
T Consensus 256 ~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 256 L-KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp T-SSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred h-hchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 1 1122233444455556677888999999999999999999999999999975
No 21
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=5.8e-45 Score=411.42 Aligned_cols=251 Identities=21% Similarity=0.315 Sum_probs=210.6
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.++|++.+.||+|+||.||+|.+. +|+.||+|++.... ....+.+.+|+.+|+.++||||++++++|.+.+.+|+||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~--~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~ 233 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY 233 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc--hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 367999999999999999999775 69999999986543 344667889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCC--CceEEcccCCCccC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE--LNPHLSDCGLAALT 565 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~--~~~kl~Dfg~a~~~ 565 (720)
|||+||+|.+++.. ....+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+..
T Consensus 234 E~~~gg~L~~~i~~---~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~ 307 (573)
T 3uto_A 234 EFMSGGELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL 307 (573)
T ss_dssp ECCCCCBHHHHHTC---TTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEEC
T ss_pred eecCCCcHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEc
Confidence 99999999999852 346799999999999999999999999 99999999999999854 89999999999877
Q ss_pred CCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
.... .....+||+.|||||++.+..|+.++||||+||++|||++|+.||.+...... +..+.
T Consensus 308 ~~~~--~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~----------------~~~i~ 369 (573)
T 3uto_A 308 DPKQ--SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET----------------LRNVK 369 (573)
T ss_dssp CTTS--EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH----------------HHHHH
T ss_pred cCCC--ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH----------------HHHHH
Confidence 5432 23446899999999999999999999999999999999999999986543211 11111
Q ss_pred cccc--CCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 646 DPAL--NGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 646 ~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.... ........+.++.+||.+||+.||++||++.|++++
T Consensus 370 ~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 370 SCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp TTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1111 111123456778999999999999999999999874
No 22
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=9e-44 Score=373.28 Aligned_cols=265 Identities=32% Similarity=0.459 Sum_probs=212.3
Q ss_pred HhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
..++|++.+.||+|+||.||+|++ +|+.||+|++............+.+|+.++++++||||+++++++...+..++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 456788899999999999999987 5889999999877666667788999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS--VVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~--iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
||+++|+|.++++... ....+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+++..
T Consensus 114 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSG-AREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp ECCTTCBHHHHHHSTT-HHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred ecCCCCcHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 9999999999997311 112489999999999999999999999 8 999999999999999999999999999754
Q ss_pred CCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ....
T Consensus 190 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~----------------~~~~ 252 (309)
T 3p86_A 190 ASTF-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVV----------------AAVG 252 (309)
T ss_dssp -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHH----------------HHHH
T ss_pred cccc-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH----------------HHHH
Confidence 3322 2233467999999999999999999999999999999999999999764332111 1111
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhc
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRAS 694 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 694 (720)
........+...+..+.+++.+||+.||++||++.++++.|+++++...
T Consensus 253 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~ 301 (309)
T 3p86_A 253 FKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301 (309)
T ss_dssp HSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC---
T ss_pred hcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCC
Confidence 1122233455677889999999999999999999999999999987653
No 23
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.3e-43 Score=379.69 Aligned_cols=266 Identities=26% Similarity=0.431 Sum_probs=220.2
Q ss_pred hcCCCccceeccCCCcEEEEEEEc--------CCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEee
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA--------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAE 479 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 479 (720)
.++|...+.||+|+||.||+|.+. ++..||+|+++... .......+.+|+.+++++ +||||+++++++..
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC-BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc-CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 467888999999999999999763 35679999997553 445567899999999999 89999999999999
Q ss_pred cCeEEEEEEecCCCCHHHHhhhccC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEE
Q 005001 480 HGQRLLVYEYVGNGNLHDMLHFADD------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANIL 547 (720)
Q Consensus 480 ~~~~~lV~e~~~~gsL~~~l~~~~~------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIl 547 (720)
.+..++||||+++|+|.++++.... ....+++.++..++.||+.||+|||+. +|+||||||+|||
T Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIl 235 (370)
T 2psq_A 159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 235 (370)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEE
Confidence 9999999999999999999975431 124689999999999999999999999 9999999999999
Q ss_pred eCCCCceEEcccCCCccCCCCCcc-ccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchh
Q 005001 548 LDDELNPHLSDCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQ 625 (720)
Q Consensus 548 l~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~ 625 (720)
++.++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||........
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~- 314 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL- 314 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH-
T ss_pred ECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH-
Confidence 999999999999999865443221 2233467889999999999999999999999999999999 9999976432211
Q ss_pred hHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhcc
Q 005001 626 SLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 695 (720)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~~ 695 (720)
...+........+..++..+.++|.+||+.||++||++.|+++.|++++.....
T Consensus 315 ----------------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~~ 368 (370)
T 2psq_A 315 ----------------FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 368 (370)
T ss_dssp ----------------HHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred ----------------HHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhcc
Confidence 111111222334566778899999999999999999999999999999876543
No 24
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.3e-43 Score=362.71 Aligned_cols=258 Identities=26% Similarity=0.453 Sum_probs=218.3
Q ss_pred hcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
.++|+..+.||+|+||.||+|.+.+++.||+|++...... .+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE 85 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccC---HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEE
Confidence 3578889999999999999999988999999999765433 4568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+++++|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 86 ~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 86 FMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp CCTTCBHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred eCCCCcHHHHHHh---cCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccc
Confidence 9999999999963 345789999999999999999999999 9999999999999999999999999999866543
Q ss_pred CccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
.........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||........ ...+..
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~-----------------~~~~~~ 222 (269)
T 4hcu_A 160 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV-----------------VEDIST 222 (269)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH-----------------HHHHHT
T ss_pred ccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHH-----------------HHHHhc
Confidence 3333344567889999999999999999999999999999999 9999976432111 111111
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHh
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQR 692 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~ 692 (720)
......+...+..+.+++.+||+.||++||++++++++|+++.+.
T Consensus 223 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 223 GFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 222333455677899999999999999999999999999998764
No 25
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.8e-43 Score=373.69 Aligned_cols=250 Identities=24% Similarity=0.373 Sum_probs=213.8
Q ss_pred hcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.++|+..+.||+|+||.||+|.+ .+|+.||+|++............+.+|+++++.++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 45789999999999999999987 57999999999877666667788999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++|+|.+++.. .+.+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 94 e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 94 EYASGGEVFDYLVA----HGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp CCCTTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred ECCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 99999999999963 36799999999999999999999999 999999999999999999999999999976543
Q ss_pred CCccccccccccccccCccccccCCCc-ccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYT-VKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
.. .....+||+.|+|||++.+..++ .++|||||||++|||++|+.||......... .++..
T Consensus 167 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~----------------~~i~~ 228 (328)
T 3fe3_A 167 GG--KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR----------------ERVLR 228 (328)
T ss_dssp SC--GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----------------HHHHH
T ss_pred CC--ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHH----------------HHHHh
Confidence 32 23456899999999999988875 7999999999999999999999764422111 11111
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.. ...|...+.++.+|+++||+.||.+|||++|++++
T Consensus 229 ~~--~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 229 GK--YRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp CC--CCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred CC--CCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11 12344566788999999999999999999999875
No 26
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=4.2e-43 Score=371.01 Aligned_cols=262 Identities=26% Similarity=0.420 Sum_probs=216.9
Q ss_pred hcCCCccceeccCCCcEEEEEEEc----CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (720)
.++|++.+.||+|+||.||+|.+. .+..||||++.... .......+.+|+.++++++||||+++++++.+.+..+
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 126 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY-TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAM 126 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccE
Confidence 467888999999999999999874 35569999997543 4455678999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
+||||+++|+|.++++. ....+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 127 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 200 (325)
T 3kul_A 127 IVTEYMENGSLDTFLRT---HDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRV 200 (325)
T ss_dssp EEEECCTTCBHHHHHHT---TTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred EEeeCCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccc
Confidence 99999999999999963 346799999999999999999999999 999999999999999999999999999987
Q ss_pred CCCCCcc--ccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHH
Q 005001 565 TPNTERQ--VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDAL 641 (720)
Q Consensus 565 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (720)
....... ......+|+.|+|||++.+..++.++|||||||++|||++ |..||....... .
T Consensus 201 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~-----------------~ 263 (325)
T 3kul_A 201 LEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD-----------------V 263 (325)
T ss_dssp CC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH-----------------H
T ss_pred cccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH-----------------H
Confidence 6543222 2223456789999999999999999999999999999999 999997543221 1
Q ss_pred HhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhc
Q 005001 642 AKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRAS 694 (720)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 694 (720)
...+........+..++..+.+++.+||+.||++||++.++++.|+++.+...
T Consensus 264 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 264 ISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred HHHHHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 11111222334455677889999999999999999999999999999987654
No 27
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=3.1e-43 Score=364.56 Aligned_cols=261 Identities=23% Similarity=0.395 Sum_probs=217.5
Q ss_pred HHhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
...++|+..+.||+|+||.||+|.+.++..||+|++...... .+.+.+|++++.+++||||+++++++.+.+..++|
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 97 (283)
T 3gen_A 21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97 (283)
T ss_dssp CCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred CCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC---HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEE
Confidence 345678899999999999999999998889999999765433 45688999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||+++++|.+++... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 98 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 171 (283)
T 3gen_A 98 TEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 171 (283)
T ss_dssp ECCCTTCBHHHHHHCG---GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBC
T ss_pred EeccCCCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccc
Confidence 9999999999999732 35699999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
...........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......... ..+
T Consensus 172 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~-----------------~~~ 234 (283)
T 3gen_A 172 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA-----------------EHI 234 (283)
T ss_dssp CHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH-----------------HHH
T ss_pred ccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHH-----------------HHH
Confidence 433333334567889999999999999999999999999999998 99999764322111 111
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
........+...+..+.+++.+||+.||++||++++++++|.++.++.
T Consensus 235 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e 282 (283)
T 3gen_A 235 AQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282 (283)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred hcccCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence 112223334555678999999999999999999999999999998764
No 28
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=8.2e-43 Score=363.96 Aligned_cols=252 Identities=26% Similarity=0.409 Sum_probs=211.4
Q ss_pred HhcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
..++|+..+.||+|+||.||+|.+ .+++.||+|++...... ....+.+|+.+++.++||||+++++++...+..++|
T Consensus 18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 95 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (297)
T ss_dssp GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc--HHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEE
Confidence 456899999999999999999976 56899999998654322 356688999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||+++|+|.+++. ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++....
T Consensus 96 ~e~~~~~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (297)
T 3fxz_A 96 MEYLAGGSLTDVVT-----ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167 (297)
T ss_dssp EECCTTCBHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EECCCCCCHHHHHh-----hcCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecC
Confidence 99999999999997 24689999999999999999999999 99999999999999999999999999987665
Q ss_pred CCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....+......+ .. .
T Consensus 168 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~-------------~~--~ 231 (297)
T 3fxz_A 168 PEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI-------------AT--N 231 (297)
T ss_dssp STTC-CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-------------HH--H
T ss_pred Cccc-ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-------------Hh--C
Confidence 4332 234467999999999999999999999999999999999999999764432111110 00 1
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.......+...+..+.+++.+||+.||++||++.|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 232 GTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp CSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 111222345667789999999999999999999999875
No 29
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.7e-43 Score=376.12 Aligned_cols=254 Identities=22% Similarity=0.339 Sum_probs=203.5
Q ss_pred HHHhcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEE
Q 005001 406 QTATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (720)
Q Consensus 406 ~~~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (720)
....++|+..+.||+|+||.||+|.+ .+|+.||+|++...... .....+.+|++++++++||||+++++++...+..+
T Consensus 6 ~~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~ 84 (347)
T 3zgw_A 6 DELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG-SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIF 84 (347)
T ss_dssp TTTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc-hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEE
Confidence 34567899999999999999999986 47899999998755432 23456889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
+||||+++|+|.+++.. .+.+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 85 lv~E~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~ 157 (347)
T 3zgw_A 85 MVLEYCPGGELFDYIIS----QDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAK 157 (347)
T ss_dssp EEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCccc
Confidence 99999999999999863 35799999999999999999999999 999999999999999999999999999876
Q ss_pred CCCCCccccccccccccccCccccccCCC-cccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHh
Q 005001 565 TPNTERQVSTQMVGAFGYSAPEFALSGIY-TVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAK 643 (720)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (720)
............+||+.|+|||++.+..+ +.++|||||||++|||++|..||........ ..+
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~----------------~~~ 221 (347)
T 3zgw_A 158 PKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMAL----------------YKK 221 (347)
T ss_dssp --------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----------------HHH
T ss_pred ccCCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH----------------HHH
Confidence 65443333455689999999999998876 8999999999999999999999976432111 111
Q ss_pred hcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 644 MVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 644 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+.... ...+...+..+.+|+.+||+.||++|||++|++++
T Consensus 222 i~~~~--~~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 222 IMRGK--YDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp HHHTC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred HHcCC--CCCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 11111 12344566778899999999999999999999986
No 30
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=5.1e-43 Score=367.97 Aligned_cols=262 Identities=26% Similarity=0.439 Sum_probs=215.6
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.++|...+.||+|+||.||+|.+. +++.||+|++... .....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 86 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF--DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFIT 86 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEE
Confidence 356888899999999999999875 6899999988543 4556778999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++|+|.++++. ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 87 e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 160 (310)
T 3s95_A 87 EYIKGGTLRGIIKS---MDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVD 160 (310)
T ss_dssp ECCTTCBHHHHHHH---CCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC-
T ss_pred EecCCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccc
Confidence 99999999999973 246799999999999999999999999 999999999999999999999999999986543
Q ss_pred CCccc-------------cccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccc
Q 005001 568 TERQV-------------STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQ 634 (720)
Q Consensus 568 ~~~~~-------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 634 (720)
..... .....||+.|+|||++.+..++.++||||||+++|||++|..||....+..... .
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~-------~ 233 (310)
T 3s95_A 161 EKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF-------G 233 (310)
T ss_dssp -------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS-------S
T ss_pred ccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH-------h
Confidence 32211 114579999999999999999999999999999999999999987654322110 0
Q ss_pred cccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 635 LHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
......... ..+..++..+.+++.+||+.||++||++.++++.|+++....
T Consensus 234 ~~~~~~~~~--------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~ 284 (310)
T 3s95_A 234 LNVRGFLDR--------YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL 284 (310)
T ss_dssp BCHHHHHHH--------TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred hhhhccccc--------cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 000011111 123445567889999999999999999999999999987654
No 31
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=7.7e-43 Score=368.62 Aligned_cols=276 Identities=22% Similarity=0.315 Sum_probs=214.1
Q ss_pred HhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecC----eE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG----QR 483 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~ 483 (720)
..++|+..+.||+|+||.||+|++. ++.||||++.... .......+|+.++++++||||+++++++.... ..
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 97 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD---KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDL 97 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred chhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc---hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceE
Confidence 4567899999999999999999875 7999999996432 33445567899999999999999999998754 46
Q ss_pred EEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhc-------CCCCcEEecCCCCCEEeCCCCceEE
Q 005001 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV-------CLPSVVHRNFKSANILLDDELNPHL 556 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-------~~~~iiH~Dlkp~NIll~~~~~~kl 556 (720)
++||||+++|+|.++++. ..+++..+..++.|++.||+|||+. +.++|+||||||+|||++.++.+||
T Consensus 98 ~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL 172 (322)
T 3soc_A 98 WLITAFHEKGSLSDFLKA-----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACI 172 (322)
T ss_dssp EEEEECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEE
T ss_pred EEEEecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEE
Confidence 999999999999999973 4599999999999999999999975 1238999999999999999999999
Q ss_pred cccCCCccCCCCCcc-ccccccccccccCcccccc-----CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHh
Q 005001 557 SDCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALS-----GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRW 630 (720)
Q Consensus 557 ~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~ 630 (720)
+|||+++........ ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||..............
T Consensus 173 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 252 (322)
T 3soc_A 173 ADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEE 252 (322)
T ss_dssp CCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHH
T ss_pred ccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhh
Confidence 999999765443222 2234579999999999987 3567789999999999999999999987554322222111
Q ss_pred hccccccHHHHHhh-cccccCCCC-----ChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 631 ATPQLHDIDALAKM-VDPALNGMY-----PAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 631 ~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
.. ........... ......... ....+..+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 253 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~ 320 (322)
T 3soc_A 253 IG-QHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT 320 (322)
T ss_dssp HC-SSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred hc-cCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 11 11112222222 222222222 2245677999999999999999999999999999987653
No 32
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=8.8e-43 Score=375.38 Aligned_cols=262 Identities=24% Similarity=0.425 Sum_probs=208.0
Q ss_pred hcCCCccceeccCCCcEEEEEEEc----CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (720)
.++|...+.||+|+||.||+|.+. ++..||||+++... .....+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 122 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceE
Confidence 457899999999999999999765 57789999997543 4455678999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
+||||+++|+|.++++. ....+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 123 lv~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 123 IVTEYMENGSLDSFLRK---HDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp EEEECCTTCBHHHHHHT---TTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEeCCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 99999999999999973 345799999999999999999999999 999999999999999999999999999987
Q ss_pred CCCCCccc--cccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHH
Q 005001 565 TPNTERQV--STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDAL 641 (720)
Q Consensus 565 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (720)
........ .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... .
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~-----------------~ 259 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD-----------------V 259 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH-----------------H
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH-----------------H
Confidence 65432211 122345778999999999999999999999999999998 999997543211 1
Q ss_pred HhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhc
Q 005001 642 AKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRAS 694 (720)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 694 (720)
.+.+........+..++..+.+++.+||+.||++||++.++++.|+++++...
T Consensus 260 ~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~~ 312 (373)
T 2qol_A 260 IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 312 (373)
T ss_dssp HHHHHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCGG
T ss_pred HHHHHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCcc
Confidence 11222223333455677889999999999999999999999999999987654
No 33
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.7e-43 Score=380.35 Aligned_cols=261 Identities=23% Similarity=0.388 Sum_probs=218.0
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
..++|...+.||+|+||.||+|.+. +++.||+|.++... .......+.+|++++++++||||+++++++...+..++|
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 190 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL-PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIV 190 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS-CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEE
Confidence 3457888899999999999999886 78999999987542 344556788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||+++|+|.++++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 191 ~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 191 MELVQGGDFLTFLRTE---GARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEA 264 (377)
T ss_dssp EECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred EEcCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence 9999999999999732 34689999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCcccc-ccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhh
Q 005001 567 NTERQVS-TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKM 644 (720)
Q Consensus 567 ~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (720)
....... ....+++.|+|||.+.+..++.++|||||||++|||++ |..||....... ..+.
T Consensus 265 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~-----------------~~~~ 327 (377)
T 3cbl_A 265 DGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ-----------------TREF 327 (377)
T ss_dssp TSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH-----------------HHHH
T ss_pred CCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----------------HHHH
Confidence 3221111 12246788999999999999999999999999999998 999997643211 1122
Q ss_pred cccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHh
Q 005001 645 VDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQR 692 (720)
Q Consensus 645 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~ 692 (720)
+........+..++..+.++|.+||+.||++|||+.++++.|+++.++
T Consensus 328 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 328 VEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 222233345666778899999999999999999999999999998765
No 34
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=5.5e-43 Score=359.59 Aligned_cols=258 Identities=25% Similarity=0.400 Sum_probs=217.3
Q ss_pred HhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
..++|+..+.||+|+||.||+|.+.++..||+|++...... ...+.+|++++.+++||||+++++++...+..++||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS---EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVT 82 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC---HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCc---HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEE
Confidence 34678899999999999999999998889999999765433 456889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++++|.++++.. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 83 e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 156 (268)
T 3sxs_A 83 EYISNGCLLNYLRSH---GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD 156 (268)
T ss_dssp ECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCT
T ss_pred EccCCCcHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecch
Confidence 999999999999742 34689999999999999999999999 999999999999999999999999999987655
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
..........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......... .+. .
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~----------------~~~-~ 219 (268)
T 3sxs_A 157 DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVV----------------LKV-S 219 (268)
T ss_dssp TCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH----------------HHH-H
T ss_pred hhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHH----------------HHH-H
Confidence 44444444567888999999999999999999999999999999 99999754322111 111 1
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHH
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQ 691 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~ 691 (720)
.......+...+..+.+++.+||+.||++||++.+++++|+++.+
T Consensus 220 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 220 QGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp TTCCCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred cCCCCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 111222344456789999999999999999999999999987744
No 35
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=7.5e-43 Score=363.76 Aligned_cols=265 Identities=22% Similarity=0.331 Sum_probs=210.7
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
.++|+..+.||+|+||.||+|.+. +++.||+|++..... .....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 467999999999999999999765 688999999854432 344567889999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||+++++|.+++.. .+.+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 90 ~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 90 MEYIEGPTLSEYIES----HGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162 (294)
T ss_dssp EECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred EeCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence 999999999999973 35799999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
...........||+.|+|||.+.+..++.++||||||+++|||++|+.||......... ........
T Consensus 163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~--~~~~~~~~----------- 229 (294)
T 4eqm_A 163 ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA--IKHIQDSV----------- 229 (294)
T ss_dssp ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHH--HHHHSSCC-----------
T ss_pred cccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH--HHHhhccC-----------
Confidence 44333344567999999999999999999999999999999999999999764422111 00000000
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCC-CHHHHHHHHHHHHHhh
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRP-PMSEVVQALVRLVQRA 693 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~ell~~L~~~~~~~ 693 (720)
+......+...+..+.+++.+||+.||++|| +++++.+.|+++....
T Consensus 230 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 230 PNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp CCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred CCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 0000112334567889999999999999998 8899999887765443
No 36
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=5.9e-42 Score=359.16 Aligned_cols=264 Identities=25% Similarity=0.412 Sum_probs=210.7
Q ss_pred HhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
..++|...+.||+|+||.||+|.+. ..+|+|+++.........+.+.+|+.++++++||||+++++++. .+..++||
T Consensus 34 ~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~ 110 (307)
T 3lb7_A 34 EASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVT 110 (307)
T ss_dssp CTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred cccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEE
Confidence 3467899999999999999999764 35899988766656667788999999999999999999999865 45689999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++++|.++++. ....+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 111 e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~ 184 (307)
T 3lb7_A 111 QWCEGSSLYKHLHV---QETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp ECCSSCBHHHHHHT---SCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC---
T ss_pred ecCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceeccc
Confidence 99999999999963 356799999999999999999999999 999999999999999999999999999976543
Q ss_pred C-CccccccccccccccCccccc---cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHh
Q 005001 568 T-ERQVSTQMVGAFGYSAPEFAL---SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAK 643 (720)
Q Consensus 568 ~-~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (720)
. .........||+.|+|||++. +..++.++|||||||++|||++|+.||............ ..+
T Consensus 185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~------------~~~ 252 (307)
T 3lb7_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM------------VGR 252 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHH------------HHH
T ss_pred ccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHH------------Hhc
Confidence 2 122233457999999999986 667899999999999999999999999865432211110 111
Q ss_pred hcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHh
Q 005001 644 MVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQR 692 (720)
Q Consensus 644 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~ 692 (720)
.............++..+.+++.+||+.||++||++.++++.|+.+.+.
T Consensus 253 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~ 301 (307)
T 3lb7_A 253 GYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp TCCCCCSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred CCCCcchhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence 1111111122345677899999999999999999999999999887554
No 37
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.8e-42 Score=364.23 Aligned_cols=266 Identities=26% Similarity=0.436 Sum_probs=220.1
Q ss_pred HHhcCCCccceeccCCCcEEEEEEE------cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEF------ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH 480 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 480 (720)
...++|...+.||+|+||.||+|.+ .+++.||+|++.... .......+.+|+.++++++||||+++++++...
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 98 (314)
T 2ivs_A 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98 (314)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred cchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecC
Confidence 3456788999999999999999976 245789999997543 455567889999999999999999999999999
Q ss_pred CeEEEEEEecCCCCHHHHhhhccC--------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEec
Q 005001 481 GQRLLVYEYVGNGNLHDMLHFADD--------------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRN 540 (720)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~l~~~~~--------------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~D 540 (720)
+..++||||+++|+|.+++..... ....+++.++..++.|++.||+|||+. +|+|||
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~d 175 (314)
T 2ivs_A 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRD 175 (314)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCC
T ss_pred CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccc
Confidence 999999999999999999975432 123489999999999999999999999 999999
Q ss_pred CCCCCEEeCCCCceEEcccCCCccCCCCCcc-ccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCC
Q 005001 541 FKSANILLDDELNPHLSDCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDS 618 (720)
Q Consensus 541 lkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~ 618 (720)
|||+||+++.++.+||+|||++......... ......+|+.|+|||.+.+..++.++|||||||++|||++ |..||..
T Consensus 176 ikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 255 (314)
T 2ivs_A 176 LAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 255 (314)
T ss_dssp CSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred cchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999866443322 2233467889999999999999999999999999999999 9999976
Q ss_pred CCCcchhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 619 SRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
....... ..+........+...+..+.+++.+||+.||++||++.++++.|++++++.
T Consensus 256 ~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 313 (314)
T 2ivs_A 256 IPPERLF-----------------NLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKR 313 (314)
T ss_dssp CCGGGHH-----------------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred CCHHHHH-----------------HHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhhc
Confidence 5432111 111112222345566788999999999999999999999999999998753
No 38
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.9e-42 Score=372.10 Aligned_cols=270 Identities=26% Similarity=0.421 Sum_probs=223.1
Q ss_pred HHhcCCCccceeccCCCcEEEEEEEc--------CCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEE
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEFA--------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYC 477 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 477 (720)
...++|.+.+.||+|+||.||+|.+. .+..||+|++.... .......+.+|+++++++ +||||+++++++
T Consensus 66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~ 144 (382)
T 3tt0_A 66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGAC 144 (382)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc-CHHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence 34568899999999999999999763 23579999997553 445567889999999999 999999999999
Q ss_pred eecCeEEEEEEecCCCCHHHHhhhccC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCC
Q 005001 478 AEHGQRLLVYEYVGNGNLHDMLHFADD------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSAN 545 (720)
Q Consensus 478 ~~~~~~~lV~e~~~~gsL~~~l~~~~~------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~N 545 (720)
...+..++||||+++|+|.+++..... ....+++.++..++.|++.||+|||+. +|+||||||+|
T Consensus 145 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~N 221 (382)
T 3tt0_A 145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARN 221 (382)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGG
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcce
Confidence 999999999999999999999975431 124699999999999999999999999 99999999999
Q ss_pred EEeCCCCceEEcccCCCccCCCCCc-cccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcc
Q 005001 546 ILLDDELNPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRS 623 (720)
Q Consensus 546 Ill~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~ 623 (720)
||++.++.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus 222 Ill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~- 300 (382)
T 3tt0_A 222 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE- 300 (382)
T ss_dssp EEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-
T ss_pred EEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence 9999999999999999986654322 22334567899999999999999999999999999999999 99999754321
Q ss_pred hhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhcccc
Q 005001 624 EQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVK 697 (720)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~~~~ 697 (720)
.+.+.+........+..++.++.+++.+||+.||++||+++|+++.|+++....+...
T Consensus 301 ----------------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~ 358 (382)
T 3tt0_A 301 ----------------ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQE 358 (382)
T ss_dssp ----------------HHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC
T ss_pred ----------------HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCC
Confidence 1112222222333455677889999999999999999999999999999987665443
No 39
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.5e-42 Score=366.03 Aligned_cols=250 Identities=24% Similarity=0.337 Sum_probs=210.5
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
++|+..+.||+|+||.||+|+.. +|+.||+|++..... .......+.+|+.+++.++||||+++++++...+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 57888999999999999999875 689999999975432 2234567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.+|.+||+|||+++....
T Consensus 85 E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 157 (337)
T 1o6l_A 85 EYANGGELFFHLSR----ERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157 (337)
T ss_dssp ECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhccc
Confidence 99999999999873 46789999999999999999999999 999999999999999999999999999976433
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
.. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+...
T Consensus 158 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~----------------~~~i~~~ 220 (337)
T 1o6l_A 158 DG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL----------------FELILME 220 (337)
T ss_dssp TT-CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH----------------HHHHHHC
T ss_pred CC-CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHH----------------HHHHHcC
Confidence 22 223456899999999999999999999999999999999999999975432111 1111111
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRP-----PMSEVVQA 685 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~ell~~ 685 (720)
...+|...+.++.++|.+||+.||++|| +++|++++
T Consensus 221 --~~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 221 --EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp --CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred --CCCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 1224556677899999999999999999 89999876
No 40
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.2e-42 Score=365.41 Aligned_cols=273 Identities=22% Similarity=0.397 Sum_probs=204.8
Q ss_pred HHHHhcCCCccceeccCCCcEEEEEEEcCC----cEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec
Q 005001 405 LQTATNSFSQEFLIGEGSLGRVYRAEFANG----KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH 480 (720)
Q Consensus 405 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 480 (720)
+....++|+..+.||+|+||.||+|.+... ..||+|++..........+.+.+|++++++++||||+++++++...
T Consensus 18 ~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 97 (323)
T 3qup_A 18 VLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRS 97 (323)
T ss_dssp TBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC
T ss_pred cccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecc
Confidence 344567899999999999999999976543 2799999987655566678899999999999999999999999876
Q ss_pred CeE------EEEEEecCCCCHHHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCC
Q 005001 481 GQR------LLVYEYVGNGNLHDMLHFADD--SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL 552 (720)
Q Consensus 481 ~~~------~lV~e~~~~gsL~~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~ 552 (720)
+.. ++||||+++|+|.+++..... ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 98 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~ 174 (323)
T 3qup_A 98 RAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDM 174 (323)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTS
T ss_pred ccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCC
Confidence 655 999999999999999965432 223689999999999999999999999 999999999999999999
Q ss_pred ceEEcccCCCccCCCCCc-cccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHh
Q 005001 553 NPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRW 630 (720)
Q Consensus 553 ~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~ 630 (720)
.+||+|||+++....... .......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||.........
T Consensus 175 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~----- 249 (323)
T 3qup_A 175 TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIY----- 249 (323)
T ss_dssp CEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH-----
T ss_pred CEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHH-----
Confidence 999999999976543322 12233457889999999999999999999999999999999 99999765432111
Q ss_pred hccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhcccc
Q 005001 631 ATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVK 697 (720)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~~~~ 697 (720)
.... .......+...+..+.+++.+||+.||++||++.++++.|++++++.....
T Consensus 250 -----------~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~ 304 (323)
T 3qup_A 250 -----------NYLI-GGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLS 304 (323)
T ss_dssp -----------HHHH-TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-----
T ss_pred -----------HHHh-cCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcC
Confidence 1111 111223455667789999999999999999999999999999999876554
No 41
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=2.5e-42 Score=357.36 Aligned_cols=261 Identities=23% Similarity=0.367 Sum_probs=204.6
Q ss_pred HhcCCCccceeccCCCcEEEEEEEcC----CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFAN----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (720)
..++|+..+.||+|+||.||+|.+.. +..||+|++.... .....+.+.+|+.++++++||||+++++++. ++..
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 90 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 90 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCcc
Confidence 34678899999999999999997643 4579999987543 4455678899999999999999999999984 5678
Q ss_pred EEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
++||||+++++|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 91 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 164 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQV---RKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 164 (281)
T ss_dssp EEEEECCTTEEHHHHHHH---TTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred EEEEecCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccccc
Confidence 999999999999999973 245789999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 564 LTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
..............+|+.|+|||++.+..++.++||||||+++|||++ |..||......... .
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~----------------~ 228 (281)
T 1mp8_A 165 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI----------------G 228 (281)
T ss_dssp --------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH----------------H
T ss_pred ccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHH----------------H
Confidence 765443333334567889999999999999999999999999999997 99999765432111 1
Q ss_pred hhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 643 KMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
.+.. ......+...+..+.+++.+||+.||++||++.|+++.|+++.++.
T Consensus 229 ~i~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 229 RIEN-GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp HHHT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHc-CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 1111 1122345567788999999999999999999999999999998754
No 42
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.1e-42 Score=373.40 Aligned_cols=272 Identities=24% Similarity=0.403 Sum_probs=220.5
Q ss_pred hhcHHHHhcCCCccceeccCCCcEEEEEEEc------CCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccc
Q 005001 402 VASLQTATNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLA 474 (720)
Q Consensus 402 ~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~ 474 (720)
...++...++|+..+.||+|+||.||+|.+. +++.||||++.... .....+.+.+|++++.++ +||||++++
T Consensus 14 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~ 92 (359)
T 3vhe_A 14 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLL 92 (359)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC-CHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence 3345556788999999999999999999742 46789999997543 344567789999999999 789999999
Q ss_pred eEEeecC-eEEEEEEecCCCCHHHHhhhccCC------------------------------------------------
Q 005001 475 GYCAEHG-QRLLVYEYVGNGNLHDMLHFADDS------------------------------------------------ 505 (720)
Q Consensus 475 ~~~~~~~-~~~lV~e~~~~gsL~~~l~~~~~~------------------------------------------------ 505 (720)
+++...+ ..++||||+++|+|.++++.....
T Consensus 93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (359)
T 3vhe_A 93 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS 172 (359)
T ss_dssp EEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------
T ss_pred eeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccc
Confidence 9988765 489999999999999999753221
Q ss_pred --------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCc-
Q 005001 506 --------------SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER- 570 (720)
Q Consensus 506 --------------~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~- 570 (720)
...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++........
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 249 (359)
T 3vhe_A 173 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249 (359)
T ss_dssp -----------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTC
T ss_pred cchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccc
Confidence 12289999999999999999999999 999999999999999999999999999986543322
Q ss_pred cccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhccccc
Q 005001 571 QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPAL 649 (720)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (720)
.......||+.|+|||++.+..++.++|||||||++|||++ |+.||........ ..+.+....
T Consensus 250 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~----------------~~~~~~~~~ 313 (359)
T 3vhe_A 250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE----------------FCRRLKEGT 313 (359)
T ss_dssp EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH----------------HHHHHHHTC
T ss_pred hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH----------------HHHHHHcCC
Confidence 22344578999999999999999999999999999999998 9999976543211 111111222
Q ss_pred CCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 650 NGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 650 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
....+...+.++.+++.+||+.||++||++.|++++|+++++..
T Consensus 314 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 314 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 23345556778999999999999999999999999999988653
No 43
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2e-42 Score=372.10 Aligned_cols=268 Identities=24% Similarity=0.360 Sum_probs=218.6
Q ss_pred hcCCCccceeccCCCcEEEEEEEc------CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCe
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (720)
.++|...+.||+|+||.||+|.+. +++.||||++.... .......+.+|+.++++++||||+++++++...+.
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 148 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 148 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc-ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 467888999999999999999843 46789999996433 45556678999999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCC---ceEE
Q 005001 483 RLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL---NPHL 556 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~---~~kl 556 (720)
.++||||+++|+|.++++.... ....+++.+++.++.||+.||+|||+. +|+||||||+|||++.++ .+||
T Consensus 149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEE
Confidence 9999999999999999985432 234689999999999999999999999 999999999999999555 5999
Q ss_pred cccCCCccCCCCC-ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccc
Q 005001 557 SDCGLAALTPNTE-RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQ 634 (720)
Q Consensus 557 ~Dfg~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 634 (720)
+|||+++...... ........||+.|+|||++.+..++.++|||||||++|||++ |..||.......
T Consensus 226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~----------- 294 (367)
T 3l9p_A 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE----------- 294 (367)
T ss_dssp CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-----------
T ss_pred CCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-----------
Confidence 9999987432211 112233568999999999999999999999999999999998 999997643211
Q ss_pred cccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhcccc
Q 005001 635 LHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVK 697 (720)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~~~~ 697 (720)
+.+.+........+..++..+.+|+.+||+.||++||++.+|+++|+.+.+......
T Consensus 295 ------~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~~~~ 351 (367)
T 3l9p_A 295 ------VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVIN 351 (367)
T ss_dssp ------HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHHHHT
T ss_pred ------HHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChhhcc
Confidence 111122222233455667789999999999999999999999999999887665444
No 44
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-42 Score=369.70 Aligned_cols=268 Identities=26% Similarity=0.423 Sum_probs=218.5
Q ss_pred HHHHhcCCCccceeccCCCcEEEEEEEc------CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEe
Q 005001 405 LQTATNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCA 478 (720)
Q Consensus 405 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 478 (720)
+....++|+..+.||+|+||.||+|.+. +++.||+|.++... .......+.+|+.++++++||||+++++++.
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 120 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIVKLLGVCA 120 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 4445678999999999999999999875 34789999997543 4455678999999999999999999999999
Q ss_pred ecCeEEEEEEecCCCCHHHHhhhccCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEE
Q 005001 479 EHGQRLLVYEYVGNGNLHDMLHFADDS--------------------SKNLTWNARVRVALGTARALEYLHEVCLPSVVH 538 (720)
Q Consensus 479 ~~~~~~lV~e~~~~gsL~~~l~~~~~~--------------------~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH 538 (720)
..+..++||||+++|+|.++++..... ...+++.+++.++.||+.||+|||+. +|+|
T Consensus 121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH 197 (343)
T 1luf_A 121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVH 197 (343)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCC
T ss_pred cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Ceec
Confidence 999999999999999999999753211 26789999999999999999999999 9999
Q ss_pred ecCCCCCEEeCCCCceEEcccCCCccCCCCCc-cccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCC
Q 005001 539 RNFKSANILLDDELNPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPL 616 (720)
Q Consensus 539 ~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf 616 (720)
|||||+||+++.++.+||+|||++........ .......||+.|+|||++.+..++.++||||||+++|||++ |..||
T Consensus 198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 277 (343)
T 1luf_A 198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 277 (343)
T ss_dssp SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred CCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcC
Confidence 99999999999999999999999875433221 12233568999999999999999999999999999999999 99999
Q ss_pred CCCCCcchhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 617 DSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
....... ....+.. ......+..++..+.+++.+||+.||++||++.++++.|+++.++.
T Consensus 278 ~~~~~~~----------------~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 278 YGMAHEE----------------VIYYVRD-GNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp TTSCHHH----------------HHHHHHT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred CCCChHH----------------HHHHHhC-CCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 7543211 1111111 1122345566778999999999999999999999999999986654
No 45
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=3.7e-42 Score=353.66 Aligned_cols=255 Identities=19% Similarity=0.351 Sum_probs=214.1
Q ss_pred hcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec--CeEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQRLLV 486 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lV 486 (720)
.++|...+.||+|+||.||+|.+. ++.||+|++..........+.+.+|+.++++++||||+++++++... +..++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 357888999999999999999985 88999999987766667778899999999999999999999999877 788999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS--VVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~--iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
|||+++|+|.++++. .....+++.++..++.|++.||+|||+. + |+||||||+||+++.++.++|.|||++..
T Consensus 88 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 88 THWMPYGSLYNVLHE--GTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp EECCTTCBHHHHHHS--CSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred ecccCCCcHHHHHhh--cccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceee
Confidence 999999999999973 2233689999999999999999999998 7 99999999999999999999999888654
Q ss_pred CCCCCccccccccccccccCccccccCCCcc---cchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHH
Q 005001 565 TPNTERQVSTQMVGAFGYSAPEFALSGIYTV---KSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDAL 641 (720)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (720)
... ....||+.|+|||.+.+..++. ++||||||+++|||++|+.||....... ..
T Consensus 163 ~~~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----------------~~ 220 (271)
T 3kmu_A 163 FQS------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME----------------IG 220 (271)
T ss_dssp TSC------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH----------------HH
T ss_pred ecc------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHH----------------HH
Confidence 322 2346899999999998766544 7999999999999999999997543211 11
Q ss_pred HhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHH
Q 005001 642 AKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQ 691 (720)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~ 691 (720)
............+...+..+.+++.+||+.||++||+++++++.|+++.+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 221 MKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 22222233334556677889999999999999999999999999998743
No 46
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=8.3e-42 Score=358.80 Aligned_cols=271 Identities=21% Similarity=0.315 Sum_probs=208.2
Q ss_pred HHhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
...++|+..+.||+|+||.||+|.+.+|+.||+|++............+.+|++++++++||||+++++++.+.+..++|
T Consensus 18 ~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 97 (311)
T 3niz_A 18 GLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLV 97 (311)
T ss_dssp CSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEE
T ss_pred chHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEE
Confidence 34578999999999999999999998899999999976554444567788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||+++ +|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++....
T Consensus 98 ~e~~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 170 (311)
T 3niz_A 98 FEFMEK-DLKKVLDE---NKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFG 170 (311)
T ss_dssp EECCSE-EHHHHHHT---CTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred EcCCCC-CHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence 999985 88888762 345699999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHH-Hhh-cc---ccccHHH
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLV-RWA-TP---QLHDIDA 640 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~-~~~-~~---~~~~~~~ 640 (720)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+ ... .+ .+.....
T Consensus 171 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 249 (311)
T 3niz_A 171 IPVR-SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQE 249 (311)
T ss_dssp SCCC----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTT
T ss_pred CCcc-cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhc
Confidence 3322 2234578999999999987 56899999999999999999999999876554332221 110 11 0111111
Q ss_pred HHhhcccccC--CC-----CChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 641 LAKMVDPALN--GM-----YPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 641 ~~~~~~~~~~--~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.......... .. .....+.++.+|+.+||+.||++|||++|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 250 LPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp SHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred cchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1111110000 00 012244678899999999999999999999864
No 47
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=6.9e-42 Score=375.60 Aligned_cols=255 Identities=23% Similarity=0.301 Sum_probs=211.4
Q ss_pred HHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
...++|+..+.||+|+||.||+|... +|+.||+|++............+.+|+.+++.++||||+++++++.+.+..++
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 34567999999999999999999764 68999999998766556667789999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeC---CCCceEEcccCCC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD---DELNPHLSDCGLA 562 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~---~~~~~kl~Dfg~a 562 (720)
||||+++|+|.+.+.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++ .++.+||+|||++
T Consensus 88 v~E~~~gg~L~~~i~~----~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a 160 (444)
T 3soa_A 88 IFDLVTGGELFEDIVA----REYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLA 160 (444)
T ss_dssp EECCCBCCBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSC
T ss_pred EEEeCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCcee
Confidence 9999999999998873 46799999999999999999999999 999999999999998 4678999999999
Q ss_pred ccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 563 ALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
........ ......||+.|+|||++.+..++.++||||+||++|+|++|..||......... .
T Consensus 161 ~~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~----------------~ 223 (444)
T 3soa_A 161 IEVEGEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLY----------------Q 223 (444)
T ss_dssp BCCCTTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH----------------H
T ss_pred EEecCCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHH----------------H
Confidence 77654322 234467999999999999999999999999999999999999999764322111 1
Q ss_pred hhcccccC--CCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 643 KMVDPALN--GMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 643 ~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.+...... .......+.++.+|+.+||+.||++||++.|++++
T Consensus 224 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 224 QIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp HHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 11111111 11112456788999999999999999999999975
No 48
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=2.2e-42 Score=360.48 Aligned_cols=273 Identities=22% Similarity=0.352 Sum_probs=214.1
Q ss_pred hcCCCccceeccCCCcEEEEEEE-----cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec--C
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEF-----ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--G 481 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~ 481 (720)
.++|+..+.||+|+||.||+|++ .+++.||+|++... .....+.+.+|+.++++++||||+++++++... .
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 46788899999999999999974 36889999999754 345567889999999999999999999998553 5
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCC
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 561 (720)
..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 160 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 160 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHC---GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred ceEEEEEeCCCCCHHHHHHhc---ccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcc
Confidence 689999999999999999742 34589999999999999999999999 999999999999999999999999999
Q ss_pred CccCCCCCcc--ccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcc-cc--c
Q 005001 562 AALTPNTERQ--VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATP-QL--H 636 (720)
Q Consensus 562 a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~-~~--~ 636 (720)
+......... ......+|..|+|||.+.+..++.++||||||+++|||++|..||...... ....... .. .
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~----~~~~~~~~~~~~~ 236 (295)
T 3ugc_A 161 TKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE----FMRMIGNDKQGQM 236 (295)
T ss_dssp CC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH----HHHHHCTTCCTHH
T ss_pred cccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH----HHhhhcCccccch
Confidence 9876543221 123345788899999999999999999999999999999999998643211 1110000 00 0
Q ss_pred cHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 637 DIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
......+.+........+..++.++.+++.+||+.||++|||+.|+++.|+++.++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 237 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp HHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred hHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 011222223333344456677889999999999999999999999999999987653
No 49
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=9.6e-43 Score=385.34 Aligned_cols=261 Identities=23% Similarity=0.414 Sum_probs=217.3
Q ss_pred HHHHhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEE
Q 005001 405 LQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (720)
Q Consensus 405 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (720)
++...++|...+.||+|+||.||+|.+.++..||||+++.... ..+.+.+|+.++++++||||+++++++. .+..+
T Consensus 183 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~ 258 (454)
T 1qcf_A 183 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM---SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIY 258 (454)
T ss_dssp SBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB---CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCE
T ss_pred eeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCc---cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccE
Confidence 3445677888999999999999999998899999999976432 3677999999999999999999999986 66789
Q ss_pred EEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
+||||+++|+|.++++... ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 259 lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~ 333 (454)
T 1qcf_A 259 IITEFMAKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARV 333 (454)
T ss_dssp EEECCCTTCBHHHHHHSHH--HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGG
T ss_pred EEEeecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceE
Confidence 9999999999999997321 23688999999999999999999999 999999999999999999999999999987
Q ss_pred CCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHh
Q 005001 565 TPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAK 643 (720)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (720)
.............+|+.|+|||++.+..++.++|||||||++|||+| |+.||........ .+
T Consensus 334 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~-----------------~~ 396 (454)
T 1qcf_A 334 IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV-----------------IR 396 (454)
T ss_dssp BCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH-----------------HH
T ss_pred cCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHH-----------------HH
Confidence 64432222233457889999999999999999999999999999999 9999976432111 11
Q ss_pred hcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHH
Q 005001 644 MVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQ 691 (720)
Q Consensus 644 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~ 691 (720)
.+....+...+..++..+.++|.+||+.||++||++++|++.|+++..
T Consensus 397 ~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 397 ALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp HHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence 111222334456678889999999999999999999999999988754
No 50
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.4e-42 Score=352.49 Aligned_cols=258 Identities=26% Similarity=0.450 Sum_probs=216.7
Q ss_pred hcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
.++|+..+.||+|+||.||+|.+.+++.||+|++...... .+.+.+|++++++++||||+++++++...+..++|||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTE 83 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC---HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEe
Confidence 3568889999999999999999988999999999765433 4578899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+++++|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 157 (267)
T 3t9t_A 84 FMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 157 (267)
T ss_dssp CCTTCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred CCCCCcHHHHHhh---CcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccc
Confidence 9999999999973 245789999999999999999999999 9999999999999999999999999999866443
Q ss_pred CccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
.........+|+.|+|||++.+..++.++||||||+++|||++ |+.||........ ... +..
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~----------------~~~-i~~ 220 (267)
T 3t9t_A 158 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----------------VED-IST 220 (267)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH----------------HHH-HHT
T ss_pred cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHH----------------HHH-Hhc
Confidence 2222334567889999999999999999999999999999999 8999975432111 111 111
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHh
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQR 692 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~ 692 (720)
......+...+..+.+++.+||+.||++||++.++++.|+++.++
T Consensus 221 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 221 GFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCcCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 122233445667899999999999999999999999999998764
No 51
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=3e-42 Score=357.94 Aligned_cols=267 Identities=24% Similarity=0.420 Sum_probs=225.6
Q ss_pred HHHHhcCCCccceeccCCCcEEEEEEEcC-CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeE
Q 005001 405 LQTATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (720)
Q Consensus 405 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (720)
++...++|...+.||+|+||.||+|.+.. +..||+|++.... ...+.+.+|+.++++++||||+++++++...+..
T Consensus 8 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 84 (288)
T 3kfa_A 8 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 84 (288)
T ss_dssp TBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS---THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred ccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH---HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCE
Confidence 33456778999999999999999998764 8889999997532 3467788999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
++||||+++++|.++++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 85 ~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~ 159 (288)
T 3kfa_A 85 YIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR 159 (288)
T ss_dssp EEEEECCTTEEHHHHHHHC--CTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGG
T ss_pred EEEEEcCCCCcHHHHHHhc--ccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccce
Confidence 9999999999999999742 346699999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 564 LTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
..............+|+.|+|||.+.+..++.++||||||+++|+|++ |..||.........
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~----------------- 222 (288)
T 3kfa_A 160 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY----------------- 222 (288)
T ss_dssp TSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH-----------------
T ss_pred eccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH-----------------
Confidence 776554444455668889999999999999999999999999999999 99999765432111
Q ss_pred hhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhccc
Q 005001 643 KMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVV 696 (720)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~~~ 696 (720)
+.+........+...+..+.+++.+||+.||++||++.++++.|+++.++....
T Consensus 223 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~~~ 276 (288)
T 3kfa_A 223 ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSIS 276 (288)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence 111122233345566788999999999999999999999999999998876543
No 52
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=8.3e-42 Score=365.34 Aligned_cols=251 Identities=22% Similarity=0.302 Sum_probs=208.9
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccCh----HHHHHHHHHHHHhhcCCCCCccccceEEeecCe
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL----QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (720)
..++|...+.||+|+||.||+|... +|+.||+|.+....... .....+.+|+.+++.++||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 3567899999999999999999876 68999999997654321 135678899999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCC----ceEEcc
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL----NPHLSD 558 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~----~~kl~D 558 (720)
.++||||+++|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++ .+||+|
T Consensus 90 ~~lv~e~~~gg~L~~~l~----~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~D 162 (361)
T 2yab_A 90 VVLILELVSGGELFDFLA----QKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLID 162 (361)
T ss_dssp EEEEEECCCSCBHHHHHT----TCSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred EEEEEEcCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEe
Confidence 999999999999999996 356799999999999999999999999 999999999999998877 799999
Q ss_pred cCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccH
Q 005001 559 CGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDI 638 (720)
Q Consensus 559 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 638 (720)
||++....... ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.......
T Consensus 163 FG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~------------- 227 (361)
T 2yab_A 163 FGLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL------------- 227 (361)
T ss_dssp CSSCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH-------------
T ss_pred cCCceEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHH-------------
Confidence 99998765432 223467999999999999999999999999999999999999999764322111
Q ss_pred HHHHhhcccccCCCCC----hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 639 DALAKMVDPALNGMYP----AKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 639 ~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
..+..... .++ ...+..+.+||.+||..||++|||+.|++++
T Consensus 228 ---~~i~~~~~--~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 228 ---ANITAVSY--DFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp ---HHHHTTCC--CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ---HHHHhcCC--CCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11111111 111 2345678899999999999999999999864
No 53
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=5.5e-42 Score=367.59 Aligned_cols=254 Identities=22% Similarity=0.322 Sum_probs=211.9
Q ss_pred HHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
...++|+..+.||+|+||.||+|.+. +|+.||+|++............+.+|+.++++++||||+++++++.+.+..++
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 44567999999999999999999775 68999999998766666667889999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCC---ceEEcccCCC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL---NPHLSDCGLA 562 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~---~~kl~Dfg~a 562 (720)
||||+++|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++ .+||+|||++
T Consensus 106 v~e~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a 178 (362)
T 2bdw_A 106 VFDLVTGGELFEDIV----AREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA 178 (362)
T ss_dssp EECCCCSCBHHHHHT----TCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEecCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcc
Confidence 999999999999886 346789999999999999999999999 999999999999998654 5999999999
Q ss_pred ccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 563 ALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......... .
T Consensus 179 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~----------------~ 240 (362)
T 2bdw_A 179 IEVNDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLY----------------A 240 (362)
T ss_dssp BCCTTCC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----------------H
T ss_pred eEecCCc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHH----------------H
Confidence 8765332 223467999999999999999999999999999999999999999764321111 1
Q ss_pred hhcccccCCC--CChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 643 KMVDPALNGM--YPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 643 ~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.+........ .....+.++.+|+.+||+.||++||++.|++++
T Consensus 241 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 241 QIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp HHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred HHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1111111111 112456788999999999999999999998865
No 54
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.6e-42 Score=387.36 Aligned_cols=262 Identities=24% Similarity=0.428 Sum_probs=220.9
Q ss_pred HHhcCCCccceeccCCCcEEEEEEEcC-CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
....+|...+.||+|+||.||+|.+.. +..||||.++.... ..+.|.+|+.++++++||||+++++++...+..++
T Consensus 217 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 293 (495)
T 1opk_A 217 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 293 (495)
T ss_dssp CCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred cCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc---chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEE
Confidence 345678889999999999999998875 88999999975432 35678999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
||||+++|+|.++++.. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 294 v~E~~~~g~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 368 (495)
T 1opk_A 294 ITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLM 368 (495)
T ss_dssp EEECCTTCBHHHHHHHS--CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECC
T ss_pred EEEccCCCCHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceec
Confidence 99999999999999742 245689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhh
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKM 644 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (720)
............+|+.|+|||++.+..++.++|||||||++|||++ |..||........ .+.
T Consensus 369 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~-----------------~~~ 431 (495)
T 1opk_A 369 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV-----------------YEL 431 (495)
T ss_dssp TTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH-----------------HHH
T ss_pred cCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHH-----------------HHH
Confidence 5443333344557889999999999999999999999999999999 9999976543211 111
Q ss_pred cccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 645 VDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 645 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
+....+...+..++..+.+||.+||+.||++||++.+|++.|+++.+..
T Consensus 432 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~~ 480 (495)
T 1opk_A 432 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 480 (495)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSSS
T ss_pred HHcCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhcc
Confidence 2223333456677888999999999999999999999999998875443
No 55
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=5.1e-42 Score=352.94 Aligned_cols=256 Identities=30% Similarity=0.492 Sum_probs=201.2
Q ss_pred hcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccC--hHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALS--LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
.++|+..+.||+|+||.||+|.+. ++.||+|++...... ....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 357888999999999999999875 889999998754322 22346788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC--------CCceEEcc
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD--------ELNPHLSD 558 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~--------~~~~kl~D 558 (720)
|||+++++|.++++ ...+++..+..++.|++.||+|||+.+..+|+||||||+||+++. ++.+||+|
T Consensus 85 ~e~~~~~~L~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 85 MEFARGGPLNRVLS-----GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EECCTTEEHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEcCCCCCHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 99999999999985 467999999999999999999999992222999999999999986 77899999
Q ss_pred cCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccH
Q 005001 559 CGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDI 638 (720)
Q Consensus 559 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 638 (720)
||++....... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||......
T Consensus 160 fg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---------------- 220 (271)
T 3dtc_A 160 FGLAREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL---------------- 220 (271)
T ss_dssp CCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH----------------
T ss_pred CCccccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----------------
Confidence 99997654322 22457999999999999999999999999999999999999999754321
Q ss_pred HHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 005001 639 DALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRL 689 (720)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~ 689 (720)
...............+..++..+.+++.+||+.||++||++.|++++|+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 221 AVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp HHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred HHHHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 111122222333344566778899999999999999999999999999753
No 56
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.1e-41 Score=355.98 Aligned_cols=255 Identities=24% Similarity=0.399 Sum_probs=202.0
Q ss_pred hcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhc--CCCCCccccceEEee----cCe
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR--LRHPNIVTLAGYCAE----HGQ 482 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~----~~~ 482 (720)
.++|+..+.||+|+||.||+|.+ +++.||||++... ....+.+|.+++.. ++||||+++++++.. ...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~ 80 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR-----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQ 80 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc-----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCce
Confidence 56799999999999999999987 6899999998643 34445556666555 799999999998654 346
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCcEEecCCCCCEEeCCCCce
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLH--------EVCLPSVVHRNFKSANILLDDELNP 554 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH--------~~~~~~iiH~Dlkp~NIll~~~~~~ 554 (720)
.++||||+++|+|.++++ ...+++..+..++.|++.||+||| +. +|+||||||+|||++.++.+
T Consensus 81 ~~lv~e~~~~g~L~~~l~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~ 152 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQC 152 (301)
T ss_dssp EEEEECCCTTCBHHHHHT-----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCE
T ss_pred eEEehhhccCCCHHHHHh-----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCE
Confidence 899999999999999996 467999999999999999999999 77 99999999999999999999
Q ss_pred EEcccCCCccCCCCCccc---cccccccccccCccccccC------CCcccchhhhHHHHHHHHHhC----------CCC
Q 005001 555 HLSDCGLAALTPNTERQV---STQMVGAFGYSAPEFALSG------IYTVKSDVYSFGVVMLELLTG----------RKP 615 (720)
Q Consensus 555 kl~Dfg~a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGv~l~elltg----------~~p 615 (720)
||+|||+++......... .....||+.|+|||++.+. .++.++|||||||++|||++| +.|
T Consensus 153 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~p 232 (301)
T 3q4u_A 153 CIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPP 232 (301)
T ss_dssp EECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccc
Confidence 999999997654333221 2234799999999999887 566899999999999999999 778
Q ss_pred CCCCCCcchhhHHHhhccccccHHHHHhhcc-cccCCC-----CChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 005001 616 LDSSRPRSEQSLVRWATPQLHDIDALAKMVD-PALNGM-----YPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRL 689 (720)
Q Consensus 616 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~ 689 (720)
|....+.... .....+... ...... .+...+..+.+++.+||+.||++|||+.++++.|+++
T Consensus 233 f~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 233 FYDVVPNDPS------------FEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TTTTSCSSCC------------HHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred ccccCCCCcc------------hhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 7654332111 111111111 111111 1234678899999999999999999999999999875
No 57
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=6.9e-42 Score=359.67 Aligned_cols=268 Identities=26% Similarity=0.443 Sum_probs=221.0
Q ss_pred HHhcCCCccceeccCCCcEEEEEEE------cCCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEee
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEF------ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAE 479 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 479 (720)
...++|+..+.||+|+||.||+|.+ .+++.||+|++.... .....+.+.+|+.+++++ +||||+++++++..
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 98 (313)
T 1t46_A 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHMNIVNLLGACTI 98 (313)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch-hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec
Confidence 3456789999999999999999975 346789999997543 344567889999999999 99999999999999
Q ss_pred cCeEEEEEEecCCCCHHHHhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCC
Q 005001 480 HGQRLLVYEYVGNGNLHDMLHFADD--------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSAN 545 (720)
Q Consensus 480 ~~~~~lV~e~~~~gsL~~~l~~~~~--------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~N 545 (720)
.+..++||||+++|+|.+++..... ....+++.++..++.|++.||+|||+. +|+||||||+|
T Consensus 99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~N 175 (313)
T 1t46_A 99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARN 175 (313)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccce
Confidence 9999999999999999999975321 123589999999999999999999999 99999999999
Q ss_pred EEeCCCCceEEcccCCCccCCCCCcc-ccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcc
Q 005001 546 ILLDDELNPHLSDCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRS 623 (720)
Q Consensus 546 Ill~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~ 623 (720)
|+++.++.+||+|||++......... ......||+.|+|||.+.+..++.++||||||+++|||++ |..||.......
T Consensus 176 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~ 255 (313)
T 1t46_A 176 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 255 (313)
T ss_dssp EEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH
T ss_pred EEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh
Confidence 99999999999999999876544322 2234567889999999999999999999999999999999 999997654321
Q ss_pred hhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhc
Q 005001 624 EQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRAS 694 (720)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 694 (720)
. ..+.+........+...+..+.+++.+||+.||++||++.|+++.|++++.+..
T Consensus 256 ~----------------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 310 (313)
T 1t46_A 256 K----------------FYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310 (313)
T ss_dssp H----------------HHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred H----------------HHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence 1 111111222223345567789999999999999999999999999999987653
No 58
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=6.5e-41 Score=351.37 Aligned_cols=283 Identities=31% Similarity=0.522 Sum_probs=227.7
Q ss_pred cccchhcHHHHhcCCCcc------ceeccCCCcEEEEEEEcCCcEEEEEEcccccc--ChHHHHHHHHHHHHhhcCCCCC
Q 005001 398 TSYTVASLQTATNSFSQE------FLIGEGSLGRVYRAEFANGKIMAVKKIDNAAL--SLQEEDNFLEAVSNMSRLRHPN 469 (720)
Q Consensus 398 ~~~~~~~~~~~~~~y~~~------~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~n 469 (720)
..++..++..++++|... +.||+|+||.||+|.. +++.||+|++..... .......+.+|+.++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 456777888888888777 8999999999999987 588999999865431 2344677899999999999999
Q ss_pred ccccceEEeecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeC
Q 005001 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD 549 (720)
Q Consensus 470 iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~ 549 (720)
|+++++++...+..++||||+++++|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~ 167 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLD 167 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGG-GCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEC
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEc
Confidence 9999999999999999999999999999997432 245799999999999999999999999 999999999999999
Q ss_pred CCCceEEcccCCCccCCCCCcc-ccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHH
Q 005001 550 DELNPHLSDCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLV 628 (720)
Q Consensus 550 ~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~ 628 (720)
.++.+||+|||++......... ......||+.|+|||.+.+ .++.++||||||+++|||++|..||...........+
T Consensus 168 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~ 246 (307)
T 2nru_A 168 EAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 246 (307)
T ss_dssp TTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHH
T ss_pred CCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHH
Confidence 9999999999999865443222 2334579999999998865 5889999999999999999999999865443221111
Q ss_pred -HhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHH
Q 005001 629 -RWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLV 690 (720)
Q Consensus 629 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~ 690 (720)
..... ....+...++... ...+...+..+.+++.+||+.||++||++.++++.|+++.
T Consensus 247 ~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 247 KEEIED---EEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp HHHHHT---TSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHHhhh---hhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 10000 0111222333332 2346678889999999999999999999999999999874
No 59
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=4.5e-42 Score=362.70 Aligned_cols=254 Identities=24% Similarity=0.334 Sum_probs=205.8
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.++|++.+.||+|+||.||+|.+. +++.||+|++..... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 84 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc-cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 467999999999999999999876 789999999864432 223466889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++|+|.++++ ....+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 85 e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 157 (323)
T 3tki_A 85 EYCSGGELFDRIE----PDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (323)
T ss_dssp ECCTTEEGGGGSB----TTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred EcCCCCcHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceecc
Confidence 9999999999986 345799999999999999999999999 999999999999999999999999999976532
Q ss_pred CCc-cccccccccccccCccccccCCC-cccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 568 TER-QVSTQMVGAFGYSAPEFALSGIY-TVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 568 ~~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
... .......||+.|+|||++.+..+ +.++|||||||++|||++|+.||......... .. ...
T Consensus 158 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-~~--------------~~~ 222 (323)
T 3tki_A 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YS--------------DWK 222 (323)
T ss_dssp TTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHH-HH--------------HHH
T ss_pred CCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHH-HH--------------HHh
Confidence 221 22334679999999999988776 78999999999999999999999765432111 11 111
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
............+..+.+|+.+||+.||++|||+.|++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 223 EKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp TTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 1111111123456778899999999999999999999875
No 60
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.4e-42 Score=367.03 Aligned_cols=255 Identities=23% Similarity=0.352 Sum_probs=209.1
Q ss_pred HhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCC--CCccccceEEeecCeEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH--PNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~l 485 (720)
..++|++.+.||+|+||.||+|...+++.||+|++............+.+|+.++.+++| |||+++++++...+..++
T Consensus 7 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 86 (343)
T 3dbq_A 7 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 86 (343)
T ss_dssp SSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred ecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence 346789999999999999999998889999999997666666667889999999999976 999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
||| +.+++|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+|||++ ++.+||+|||+++..
T Consensus 87 v~e-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~ 157 (343)
T 3dbq_A 87 VME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQM 157 (343)
T ss_dssp EEC-CCSEEHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred EEe-CCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence 999 567899999973 46789999999999999999999999 999999999999997 578999999999876
Q ss_pred CCCCcc-ccccccccccccCcccccc-----------CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcc
Q 005001 566 PNTERQ-VSTQMVGAFGYSAPEFALS-----------GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATP 633 (720)
Q Consensus 566 ~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~ 633 (720)
...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------------ 225 (343)
T 3dbq_A 158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN------------ 225 (343)
T ss_dssp ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS------------
T ss_pred CcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh------------
Confidence 543322 2334679999999999875 6789999999999999999999999975322
Q ss_pred ccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 634 QLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
.........+......++...+..+.+++.+||+.||++|||+.|++++-
T Consensus 226 ---~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 226 ---QISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp ---HHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred ---HHHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 11223334444444455556667899999999999999999999999763
No 61
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.7e-42 Score=381.36 Aligned_cols=260 Identities=29% Similarity=0.471 Sum_probs=211.3
Q ss_pred HHhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
...++|+..+.||+|+||.||+|.+.++..||||+++.... ..+.+.+|+.++++++||||+++++++.+ +..++|
T Consensus 181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv 256 (452)
T 1fmk_A 181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 256 (452)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred cChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEE
Confidence 34567888999999999999999998888999999976443 24678999999999999999999999876 678999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||+++|+|.++++.. ....+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 257 ~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 331 (452)
T 1fmk_A 257 TEYMSKGSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 331 (452)
T ss_dssp ECCCTTCBHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC---
T ss_pred ehhhcCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecC
Confidence 9999999999999732 235689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
...........+|+.|+|||.+.+..++.++|||||||++|||++ |+.||....... ....+
T Consensus 332 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~-----------------~~~~i 394 (452)
T 1fmk_A 332 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-----------------VLDQV 394 (452)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-----------------HHHHH
T ss_pred CCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH-----------------HHHHH
Confidence 433333334567889999999999999999999999999999999 999997643211 11111
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHh
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQR 692 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~ 692 (720)
....+...+..++..+.++|.+||+.||++|||++++++.|+++...
T Consensus 395 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 395 ERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp HTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 22233344567788899999999999999999999999999887543
No 62
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.3e-42 Score=377.00 Aligned_cols=258 Identities=21% Similarity=0.293 Sum_probs=212.1
Q ss_pred cHHHHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecC
Q 005001 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG 481 (720)
Q Consensus 404 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 481 (720)
.+....++|+..+.||+|+||.||+|++. +++.||+|++..... .......+.+|..+++.++||||+++++++.+.+
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 142 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 142 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence 44455678999999999999999999876 588999999865322 1122345778999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCC
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 561 (720)
..|+||||+++|+|.++++ ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 143 ~~~lV~E~~~gg~L~~~l~-----~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~ 214 (410)
T 3v8s_A 143 YLYMVMEYMPGGDLVNLMS-----NYDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGT 214 (410)
T ss_dssp EEEEEECCCTTEEHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEEEeCCCCCcHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccce
Confidence 9999999999999999996 24689999999999999999999999 999999999999999999999999999
Q ss_pred CccCCCCCccccccccccccccCccccccCC----CcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcccccc
Q 005001 562 AALTPNTERQVSTQMVGAFGYSAPEFALSGI----YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHD 637 (720)
Q Consensus 562 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 637 (720)
++.............+||+.|+|||++.+.. ++.++|||||||++|||++|+.||.......
T Consensus 215 a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~-------------- 280 (410)
T 3v8s_A 215 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG-------------- 280 (410)
T ss_dssp CEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHH--------------
T ss_pred eEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhh--------------
Confidence 9876554443445678999999999998765 8899999999999999999999997643221
Q ss_pred HHHHHhhcccccCCCCC--hhHHHHHHHHHHHhcCCCCCC--CCCHHHHHHH
Q 005001 638 IDALAKMVDPALNGMYP--AKSLSRFADIIALCVQPEPEF--RPPMSEVVQA 685 (720)
Q Consensus 638 ~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dP~~--RPs~~ell~~ 685 (720)
...+++.......+| ...+.++.+||++||+.+|.+ ||+++||+++
T Consensus 281 --~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 281 --TYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp --HHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred --HHHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 111222111111122 245678899999999999998 9999999976
No 63
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.4e-41 Score=356.94 Aligned_cols=248 Identities=26% Similarity=0.367 Sum_probs=206.6
Q ss_pred CCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEec
Q 005001 412 FSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYV 490 (720)
Q Consensus 412 y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 490 (720)
|...+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.++++++||||+++++++...+..++||||+
T Consensus 47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 124 (321)
T 2c30_A 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK--QQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFL 124 (321)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT--CCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecC
Confidence 666778999999999999876 79999999986543 234567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCc
Q 005001 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER 570 (720)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 570 (720)
++++|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 125 ~~~~L~~~l~-----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 196 (321)
T 2c30_A 125 QGGALTDIVS-----QVRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP 196 (321)
T ss_dssp CSCBHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC
T ss_pred CCCCHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCcEEEeeeeeeeecccCcc
Confidence 9999999986 35799999999999999999999999 999999999999999999999999999976644322
Q ss_pred cccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccC
Q 005001 571 QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALN 650 (720)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (720)
......||+.|+|||++.+..++.++||||||+++|||++|+.||......... ..+.....+.
T Consensus 197 -~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~-------------~~~~~~~~~~-- 260 (321)
T 2c30_A 197 -KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM-------------KRLRDSPPPK-- 260 (321)
T ss_dssp -CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-------------HHHHHSSCCC--
T ss_pred -ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-------------HHHhcCCCCC--
Confidence 234467999999999999999999999999999999999999999764322111 1111111111
Q ss_pred CCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 651 GMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 651 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
...+...+..+.+++.+||+.||++||++.|++++
T Consensus 261 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 261 LKNSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp CTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cCccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11233456778999999999999999999999875
No 64
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.9e-42 Score=367.96 Aligned_cols=251 Identities=22% Similarity=0.348 Sum_probs=205.4
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 485 (720)
.++|+..+.||+|+||.||+|++. +|+.||+|++..... .......+.+|..++..+ +||||+++++++.+.+..|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 467899999999999999999875 589999999975432 233456678899999887 79999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
||||+++|+|.++++. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 102 v~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~ 174 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQK----SRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174 (353)
T ss_dssp EEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeec
Confidence 9999999999999973 36799999999999999999999999 9999999999999999999999999999754
Q ss_pred CCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
.... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...++.
T Consensus 175 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~----------------~~~~i~ 237 (353)
T 3txo_A 175 ICNG-VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD----------------LFEAIL 237 (353)
T ss_dssp CC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----------------HHHHHH
T ss_pred ccCC-ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH----------------HHHHHH
Confidence 3322 23345689999999999999999999999999999999999999997654321 111122
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCH------HHHHHH
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPM------SEVVQA 685 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~ell~~ 685 (720)
... ..+|...+..+.+++++||+.||++||++ +|++++
T Consensus 238 ~~~--~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 238 NDE--VVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp HCC--CCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred cCC--CCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 111 23455567788999999999999999998 777764
No 65
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.3e-41 Score=354.07 Aligned_cols=268 Identities=22% Similarity=0.306 Sum_probs=207.9
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
++|+..+.||+|+||+||+|.+. +++.||+|++............+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 47889999999999999999875 68999999997665555566788999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+++ +|.+.+.. ..+.+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 82 ~~~~-~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 82 FCDQ-DLKKYFDS---CNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp CCSE-EHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred cCCC-CHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 9986 66665542 356799999999999999999999999 9999999999999999999999999999866433
Q ss_pred CccccccccccccccCccccccCC-CcccchhhhHHHHHHHHHhCCCCCCCCCCcchh-h-HHHh-hccccccHHHHHhh
Q 005001 569 ERQVSTQMVGAFGYSAPEFALSGI-YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQ-S-LVRW-ATPQLHDIDALAKM 644 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~-~-~~~~-~~~~~~~~~~~~~~ 644 (720)
.. ......||+.|+|||++.+.. ++.++|||||||++|||++|..||......... . .... ..+....+....+.
T Consensus 155 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 233 (292)
T 3o0g_A 155 VR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL 233 (292)
T ss_dssp CS-CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGS
T ss_pred cc-cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccc
Confidence 22 233457899999999998766 799999999999999999998886544332211 1 1110 11111111111110
Q ss_pred ccc---------ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 645 VDP---------ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 645 ~~~---------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.+. ..........+..+.+|+.+||+.||++|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000 00011123456788999999999999999999999864
No 66
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=5.1e-42 Score=356.38 Aligned_cols=267 Identities=23% Similarity=0.356 Sum_probs=205.1
Q ss_pred cCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
++|+..+.||+|+||.||+|...+|+.||+|++............+.+|+.++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 46888999999999999999988899999999976544444456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 569 (720)
+++ +|.+++.. ..+.+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 82 LDQ-DLKKLLDV---CEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp CSE-EHHHHHHT---STTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred cCC-CHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 986 99998863 346789999999999999999999999 99999999999999999999999999987654322
Q ss_pred ccccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHH-Hh-hccc---cccHHHHHh
Q 005001 570 RQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLV-RW-ATPQ---LHDIDALAK 643 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~-~~-~~~~---~~~~~~~~~ 643 (720)
. ......||+.|+|||++.+. .++.++|||||||++|||++|+.||...........+ .. ..+. +.......+
T Consensus 155 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T 1ob3_A 155 R-KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK 233 (288)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred c-ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccc
Confidence 1 22345789999999999764 5899999999999999999999999865432221111 10 0000 000000000
Q ss_pred hcccccC-------CCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 644 MVDPALN-------GMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 644 ~~~~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.++... .......+.++.+|+.+||+.||++|||+.|++++
T Consensus 234 -~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 234 -YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp -CCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -cccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000000 01122356778999999999999999999999864
No 67
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2.3e-42 Score=377.93 Aligned_cols=261 Identities=22% Similarity=0.282 Sum_probs=212.8
Q ss_pred hcHHHHhcCCCccceeccCCCcEEEEEEEcC-CcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeec
Q 005001 403 ASLQTATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH 480 (720)
Q Consensus 403 ~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 480 (720)
..+....++|+..++||+|+||+||+|++.. ++.||+|++..... .......+.+|..++..++||||+++++++.+.
T Consensus 67 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~ 146 (437)
T 4aw2_A 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDD 146 (437)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred hcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC
Confidence 3444556789999999999999999998764 78899999965322 111233478899999999999999999999999
Q ss_pred CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccC
Q 005001 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (720)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 560 (720)
+..++||||+++|+|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 147 ~~~~lV~Ey~~gg~L~~~l~~---~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFG 220 (437)
T 4aw2_A 147 NNLYLVMDYYVGGDLLTLLSK---FEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFG 220 (437)
T ss_dssp SEEEEEECCCTTCBHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEecCCCCcHHHHHHH---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchh
Confidence 999999999999999999973 246799999999999999999999999 99999999999999999999999999
Q ss_pred CCccCCCCCccccccccccccccCccccc-----cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcccc
Q 005001 561 LAALTPNTERQVSTQMVGAFGYSAPEFAL-----SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQL 635 (720)
Q Consensus 561 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~ 635 (720)
+++.............+||+.|+|||++. +..++.++|||||||++|||++|+.||........
T Consensus 221 la~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~----------- 289 (437)
T 4aw2_A 221 SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET----------- 289 (437)
T ss_dssp TCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-----------
T ss_pred hhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH-----------
Confidence 99876554444445568999999999997 56789999999999999999999999986443211
Q ss_pred ccHHHHHhhcccccCCCCC---hhHHHHHHHHHHHhcCCCCCC--CCCHHHHHHH
Q 005001 636 HDIDALAKMVDPALNGMYP---AKSLSRFADIIALCVQPEPEF--RPPMSEVVQA 685 (720)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~cl~~dP~~--RPs~~ell~~ 685 (720)
..+++.......+| ...+.++.+||++||+.+|++ ||+++|++++
T Consensus 290 -----~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 290 -----YGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp -----HHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred -----HHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 11111111111122 235678899999999999988 9999999876
No 68
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=7.6e-42 Score=365.29 Aligned_cols=256 Identities=22% Similarity=0.296 Sum_probs=207.8
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc---ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL---SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (720)
.++|+..+.||+|+||.||+|.+. +|+.||+|++..... .....+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 456889999999999999999775 689999999864321 1123567899999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCc---eEEcccCC
Q 005001 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN---PHLSDCGL 561 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~---~kl~Dfg~ 561 (720)
+||||+++|+|.+.+.........+++..+..++.||+.||+|||+. +|+||||||+|||++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 99999999999988865444456789999999999999999999999 9999999999999987654 99999999
Q ss_pred CccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHH
Q 005001 562 AALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDAL 641 (720)
Q Consensus 562 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (720)
+....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .. .
T Consensus 180 a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~-------------~ 241 (351)
T 3c0i_A 180 AIQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE----RL-------------F 241 (351)
T ss_dssp CEECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH----HH-------------H
T ss_pred eeEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH----HH-------------H
Confidence 98765432 223446799999999999999999999999999999999999999976321 10 1
Q ss_pred HhhcccccCCC--CChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 642 AKMVDPALNGM--YPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 642 ~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
..+........ .....+..+.+||.+||+.||++||++.|++++
T Consensus 242 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 242 EGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp HHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11111111000 001345678999999999999999999999864
No 69
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.6e-41 Score=350.83 Aligned_cols=254 Identities=29% Similarity=0.488 Sum_probs=208.0
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHH-----HHHHHHHHHhhcCCCCCccccceEEeecCe
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEE-----DNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~-----~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (720)
.++|+..+.||+|+||.||+|.+. +++.||+|++.......... +.+.+|+.++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 367888999999999999999874 78999999986544322221 67889999999999999999999986654
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEEecCCCCCEEeCCCCc-----eE
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS--VVHRNFKSANILLDDELN-----PH 555 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~--iiH~Dlkp~NIll~~~~~-----~k 555 (720)
++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+. + |+||||||+||+++.++. +|
T Consensus 97 -~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~k 169 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAK 169 (287)
T ss_dssp -EEEEECCTTCBHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEE
T ss_pred -eEEEEecCCCCHHHHHhc---ccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEE
Confidence 799999999999998862 346799999999999999999999999 8 999999999999988776 99
Q ss_pred EcccCCCccCCCCCccccccccccccccCccccc--cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcc
Q 005001 556 LSDCGLAALTPNTERQVSTQMVGAFGYSAPEFAL--SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATP 633 (720)
Q Consensus 556 l~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~ 633 (720)
|+|||+++.... ......||+.|+|||++. ...++.++|||||||++|||++|+.||.........
T Consensus 170 l~Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~-------- 237 (287)
T 4f0f_A 170 VADFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK-------- 237 (287)
T ss_dssp ECCCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHH--------
T ss_pred eCCCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHH--------
Confidence 999999975432 233467999999999984 455789999999999999999999999765432211
Q ss_pred ccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 005001 634 QLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVR 688 (720)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~ 688 (720)
..............+..++..+.+++.+||+.||++||+++|+++.|++
T Consensus 238 ------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 238 ------FINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp ------HHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred ------HHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 1111222233334556677889999999999999999999999999875
No 70
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2.2e-41 Score=358.89 Aligned_cols=266 Identities=15% Similarity=0.188 Sum_probs=214.1
Q ss_pred hcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV 486 (720)
.++|+..+.||+|+||.||+|.. .+++.||+|.+..... ...+.+|+.+++++ +||||+++++++...+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 83 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMV 83 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEE
Confidence 36788999999999999999986 5789999999864432 23577899999999 999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCc-----eEEcccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN-----PHLSDCGL 561 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~-----~kl~Dfg~ 561 (720)
|||+ +++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+
T Consensus 84 ~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~ 156 (330)
T 2izr_A 84 LELL-GPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL 156 (330)
T ss_dssp EECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTT
T ss_pred EEeC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEccc
Confidence 9999 89999999742 46899999999999999999999999 9999999999999999887 99999999
Q ss_pred CccCCCCCcc------ccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcccc
Q 005001 562 AALTPNTERQ------VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQL 635 (720)
Q Consensus 562 a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~ 635 (720)
++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||...............
T Consensus 157 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i---- 232 (330)
T 2izr_A 157 AKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKI---- 232 (330)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHH----
T ss_pred ceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHH----
Confidence 9865433221 123567999999999999999999999999999999999999999876543222211100
Q ss_pred ccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhccc
Q 005001 636 HDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVV 696 (720)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~~~ 696 (720)
.......... ......+ ++.+++..||+.||.+||++++|++.|+++.++....
T Consensus 233 ---~~~~~~~~~~---~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~ 286 (330)
T 2izr_A 233 ---GDTKRATPIE---VLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYM 286 (330)
T ss_dssp ---HHHHHHSCHH---HHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred ---HhhhccCCHH---HHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 0000000000 0011234 7899999999999999999999999999998876544
No 71
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=7.7e-42 Score=361.77 Aligned_cols=259 Identities=24% Similarity=0.404 Sum_probs=207.2
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCc----EEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGK----IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (720)
.++|+..+.||+|+||.||+|.+. +++ +||+|.+.... .......+.+|+.++++++||||+++++++... ..
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~ 91 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV 91 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-Ce
Confidence 356888999999999999999864 344 36888876433 334467889999999999999999999999875 47
Q ss_pred EEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
++|+||+.+|+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 92 ~~v~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 165 (327)
T 3poz_A 92 QLITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEEECCTTCBHHHHHHH---STTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred EEEEEecCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCccee
Confidence 899999999999999974 346799999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCcc-ccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHH
Q 005001 564 LTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDAL 641 (720)
Q Consensus 564 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (720)
........ ......||+.|+|||++.+..++.++|||||||++|||++ |+.||........
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~----------------- 228 (327)
T 3poz_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----------------- 228 (327)
T ss_dssp HHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-----------------
T ss_pred EccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHH-----------------
Confidence 65433322 2233457889999999999999999999999999999999 9999976543221
Q ss_pred HhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHh
Q 005001 642 AKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQR 692 (720)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~ 692 (720)
...+........+..++..+.+++.+||+.||++||++.+++++|+++...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 229 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 112222223334556777899999999999999999999999999998764
No 72
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.2e-41 Score=355.37 Aligned_cols=252 Identities=22% Similarity=0.314 Sum_probs=200.3
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccCh------------------------HHHHHHHHHHHHhh
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL------------------------QEEDNFLEAVSNMS 463 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~------------------------~~~~~~~~e~~~l~ 463 (720)
.++|+..+.||+|+||.||+|.+. +++.||+|++....... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 367889999999999999999775 68899999986543211 12356889999999
Q ss_pred cCCCCCccccceEEee--cCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecC
Q 005001 464 RLRHPNIVTLAGYCAE--HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNF 541 (720)
Q Consensus 464 ~l~h~niv~l~~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dl 541 (720)
+++||||+++++++.. .+..++||||+++++|.+++. ...+++.++..++.|++.||+|||+. +|+||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dl 163 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-----LKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDI 163 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-----SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence 9999999999999986 568899999999999988654 46799999999999999999999999 9999999
Q ss_pred CCCCEEeCCCCceEEcccCCCccCCCCCccccccccccccccCccccccCC---CcccchhhhHHHHHHHHHhCCCCCCC
Q 005001 542 KSANILLDDELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGI---YTVKSDVYSFGVVMLELLTGRKPLDS 618 (720)
Q Consensus 542 kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGv~l~elltg~~pf~~ 618 (720)
||+||+++.++.+||+|||++........ ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||..
T Consensus 164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 242 (298)
T 2zv2_A 164 KPSNLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242 (298)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CHHHEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 99999999999999999999987654322 233467999999999998765 47889999999999999999999975
Q ss_pred CCCcchhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 619 SRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
...... ...+.............+..+.+++.+||+.||++||++.|++++
T Consensus 243 ~~~~~~----------------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 243 ERIMCL----------------HSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp SSHHHH----------------HHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred ccHHHH----------------HHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 432111 111111111112223456788999999999999999999999864
No 73
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.7e-41 Score=374.66 Aligned_cols=254 Identities=27% Similarity=0.416 Sum_probs=212.5
Q ss_pred HhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecC-eEEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG-QRLLV 486 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lV 486 (720)
..++|+..+.||+|+||.||+|.+. |+.||||+++... ..+.+.+|+.++++++||||+++++++...+ ..++|
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv 265 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEE
Confidence 3467888899999999999999885 7899999997543 3567899999999999999999999987665 78999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||+++|+|.++++.. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 266 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 266 TEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp EECCTTCBHHHHHHHH--CTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEecCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence 9999999999999743 234579999999999999999999999 99999999999999999999999999997543
Q ss_pred CCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
.. .....+|+.|+|||.+.+..++.++|||||||++|||++ |+.||......... ..+
T Consensus 341 ~~----~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~-----------------~~i 399 (450)
T 1k9a_A 341 ST----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV-----------------PRV 399 (450)
T ss_dssp ----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHH-----------------HHH
T ss_pred cc----ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH-----------------HHH
Confidence 22 122357889999999999999999999999999999998 99999765432211 111
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHh
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQR 692 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~ 692 (720)
....+...+..++..+.++|.+||+.||++||++.++++.|+++...
T Consensus 400 ~~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 400 EKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 12223345667788999999999999999999999999999998654
No 74
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.9e-41 Score=353.75 Aligned_cols=278 Identities=20% Similarity=0.299 Sum_probs=214.3
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecC--eEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG--QRLL 485 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~l 485 (720)
.++|.+.+.||+|+||.||+|.+. +++.||+|++..... ......+.+|++++++++||||+++++++...+ ..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEE
Confidence 467889999999999999999876 489999999975432 233567789999999999999999999987765 7899
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEe----CCCCceEEcccCC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL----DDELNPHLSDCGL 561 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll----~~~~~~kl~Dfg~ 561 (720)
||||+++++|.++++... ....+++.++..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+
T Consensus 87 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~ 162 (319)
T 4euu_A 87 IMEFCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (319)
T ss_dssp EEECCTTCBHHHHHHSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred EEeCCCCCCHHHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence 999999999999997432 233499999999999999999999999 99999999999999 7888899999999
Q ss_pred CccCCCCCccccccccccccccCccccc--------cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchh-hHHH-hh
Q 005001 562 AALTPNTERQVSTQMVGAFGYSAPEFAL--------SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQ-SLVR-WA 631 (720)
Q Consensus 562 a~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~-~~~~-~~ 631 (720)
++....... .....||+.|+|||++. +..++.++|||||||++|||++|+.||......... .... ..
T Consensus 163 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 240 (319)
T 4euu_A 163 ARELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240 (319)
T ss_dssp CEECCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHH
T ss_pred ceecCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHh
Confidence 987654332 23457999999999987 577899999999999999999999999754432211 1110 00
Q ss_pred --ccc--cccHHHHHh-h--c--ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 632 --TPQ--LHDIDALAK-M--V--DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 632 --~~~--~~~~~~~~~-~--~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
.+. +........ . . ........+...+..+.+++++||+.||++||+++|++++..+...+.
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~~ 311 (319)
T 4euu_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRG 311 (319)
T ss_dssp HHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC--
T ss_pred cCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhcC
Confidence 000 000000000 0 0 001112345677888999999999999999999999999987764443
No 75
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=9.4e-42 Score=352.61 Aligned_cols=264 Identities=26% Similarity=0.441 Sum_probs=217.9
Q ss_pred HHHHhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEE
Q 005001 405 LQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (720)
Q Consensus 405 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (720)
++...++|+..+.||+|+||.||+|...++..||+|++..... ..+.+.+|++++++++||||+++++++. .+..+
T Consensus 8 ~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~ 83 (279)
T 1qpc_A 8 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIY 83 (279)
T ss_dssp TBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred cccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc---cHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcE
Confidence 3445578899999999999999999998888999999975432 3567889999999999999999999886 45689
Q ss_pred EEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
+||||+++++|.+++... ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 84 ~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 158 (279)
T 1qpc_A 84 IITEYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARL 158 (279)
T ss_dssp EEEECCTTCBHHHHTTSH--HHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEecCCCCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCccccc
Confidence 999999999999999632 123689999999999999999999999 999999999999999999999999999987
Q ss_pred CCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHh
Q 005001 565 TPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAK 643 (720)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (720)
.............+|+.|+|||.+.+..++.++||||||+++|||++ |+.||........ ..
T Consensus 159 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~-----------------~~ 221 (279)
T 1qpc_A 159 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV-----------------IQ 221 (279)
T ss_dssp CSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH-----------------HH
T ss_pred ccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHH-----------------HH
Confidence 65443333344567889999999999999999999999999999999 9999975432111 11
Q ss_pred hcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhc
Q 005001 644 MVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRAS 694 (720)
Q Consensus 644 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 694 (720)
.+........+...+..+.+++.+||+.||++||++.++++.|+++.....
T Consensus 222 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 272 (279)
T 1qpc_A 222 NLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272 (279)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred HHhcccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence 111112223445667789999999999999999999999999999887653
No 76
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.3e-41 Score=367.31 Aligned_cols=259 Identities=22% Similarity=0.342 Sum_probs=206.8
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccC-hHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 485 (720)
.++|+..++||+|+||.||+|+.. +++.||+|++++.... ......+.+|..++.++ +||||+++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 356888999999999999999876 5788999999765433 22334577888888776 89999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
||||+++|+|.++++. .+.+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 131 V~E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~ 203 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 203 (396)
T ss_dssp EEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEcCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence 9999999999999973 36799999999999999999999999 9999999999999999999999999999753
Q ss_pred CCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHH-HHHhh
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDID-ALAKM 644 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 644 (720)
.... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......... ...... ....+
T Consensus 204 ~~~~-~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~--------~~~~~~~~~~~i 274 (396)
T 4dc2_A 204 LRPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP--------DQNTEDYLFQVI 274 (396)
T ss_dssp CCTT-CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC--------------CCHHHHHHHH
T ss_pred ccCC-CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccccccc--------chhhHHHHHHHH
Confidence 3222 2334578999999999999999999999999999999999999999754321110 000011 11111
Q ss_pred cccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCH------HHHHHH
Q 005001 645 VDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPM------SEVVQA 685 (720)
Q Consensus 645 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~ell~~ 685 (720)
... ...+|...+.++.+||++||+.||++||++ .|++++
T Consensus 275 ~~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 275 LEK--QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp HHC--CCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred hcc--ccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 111 223456677889999999999999999996 566554
No 77
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-41 Score=357.81 Aligned_cols=250 Identities=18% Similarity=0.220 Sum_probs=207.8
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.++|+..+.||+|+||.||+|.+. +++.||+|.+... ......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 80 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK---GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIF 80 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC---cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEE
Confidence 467899999999999999999875 5889999998643 334567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC--CCceEEcccCCCccC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD--ELNPHLSDCGLAALT 565 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~--~~~~kl~Dfg~a~~~ 565 (720)
||+++|+|.+++.. ....+++.++..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||++...
T Consensus 81 e~~~g~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~ 154 (321)
T 1tki_A 81 EFISGLDIFERINT---SAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154 (321)
T ss_dssp CCCCCCBHHHHHTS---SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred EeCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeEC
Confidence 99999999999962 335799999999999999999999999 9999999999999987 789999999999876
Q ss_pred CCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
.... ......||+.|+|||++.+..++.++|||||||++|||++|..||......... ..+.
T Consensus 155 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~----------------~~i~ 216 (321)
T 1tki_A 155 KPGD--NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQII----------------ENIM 216 (321)
T ss_dssp CTTC--EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH----------------HHHH
T ss_pred CCCC--ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHH----------------HHHH
Confidence 5432 223467999999999999998999999999999999999999999764322111 1111
Q ss_pred ccccCCC--CChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 646 DPALNGM--YPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 646 ~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
....... .....+.++.+++.+||+.||++|||+.|++++
T Consensus 217 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 217 NAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred cCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1111100 001345678999999999999999999999986
No 78
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.8e-41 Score=358.62 Aligned_cols=267 Identities=26% Similarity=0.439 Sum_probs=218.1
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc--------CCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEe
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA--------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCA 478 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 478 (720)
..++|...+.||+|+||.||+|.+. ++..||+|++.... .......+.+|+.+++++ +||||+++++++.
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 111 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC-cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc
Confidence 4567889999999999999999863 46789999997543 445567889999999999 8999999999999
Q ss_pred ecCeEEEEEEecCCCCHHHHhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCE
Q 005001 479 EHGQRLLVYEYVGNGNLHDMLHFADDS------------SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANI 546 (720)
Q Consensus 479 ~~~~~~lV~e~~~~gsL~~~l~~~~~~------------~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NI 546 (720)
..+..++||||+++|+|.+++...... ...+++.++..++.|++.||+|||+. +|+||||||+||
T Consensus 112 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NI 188 (334)
T 2pvf_A 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNV 188 (334)
T ss_dssp SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceE
Confidence 999999999999999999999753321 23589999999999999999999999 999999999999
Q ss_pred EeCCCCceEEcccCCCccCCCCCcc-ccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcch
Q 005001 547 LLDDELNPHLSDCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSE 624 (720)
Q Consensus 547 ll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~ 624 (720)
+++.++.+||+|||++......... ......+|+.|+|||++.+..++.++||||||+++|||++ |..||.......
T Consensus 189 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~- 267 (334)
T 2pvf_A 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE- 267 (334)
T ss_dssp EECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-
T ss_pred EEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH-
Confidence 9999999999999999866543322 2233467889999999999999999999999999999999 999997543211
Q ss_pred hhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhcc
Q 005001 625 QSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 695 (720)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~~ 695 (720)
+.+.+........+..++..+.+++.+||+.||++||++.|+++.|+++......
T Consensus 268 ----------------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~ 322 (334)
T 2pvf_A 268 ----------------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322 (334)
T ss_dssp ----------------HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred ----------------HHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcccc
Confidence 1111111122234456677899999999999999999999999999999876543
No 79
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.4e-41 Score=353.23 Aligned_cols=264 Identities=27% Similarity=0.441 Sum_probs=203.3
Q ss_pred HHhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
...++|+..+.||+|+||.||+|.+. ..||+|+++.........+.+.+|+.++++++||||++++++. ..+..++|
T Consensus 21 i~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv 97 (289)
T 3og7_A 21 IPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIV 97 (289)
T ss_dssp CCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEE
T ss_pred cCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEE
Confidence 34567999999999999999999764 3599999987766677778899999999999999999999965 55678999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||+++++|.++++. ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 98 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 171 (289)
T 3og7_A 98 TQWCEGSSLYHHLHA---SETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171 (289)
T ss_dssp EECCCEEEHHHHHTT---C---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC------
T ss_pred EEecCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccc
Confidence 999999999999863 346799999999999999999999999 99999999999999999999999999997654
Q ss_pred CCC-ccccccccccccccCccccc---cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 567 NTE-RQVSTQMVGAFGYSAPEFAL---SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 567 ~~~-~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
... ........||+.|+|||++. +..++.++||||||+++|||++|+.||.......... . ...
T Consensus 172 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~--~----------~~~ 239 (289)
T 3og7_A 172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII--E----------MVG 239 (289)
T ss_dssp ------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHH--H----------HHH
T ss_pred cccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHH--H----------Hhc
Confidence 322 22223457999999999987 6678899999999999999999999997654322111 0 001
Q ss_pred hhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHH
Q 005001 643 KMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQ 691 (720)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~ 691 (720)
+.............++..+.+++.+||+.||++||++.++++.|+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 240 RGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp HTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred ccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 1000111112234567789999999999999999999999999988753
No 80
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-41 Score=356.90 Aligned_cols=247 Identities=25% Similarity=0.398 Sum_probs=209.2
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
++|+..+.||+|+||.||+|... +|+.||+|++..... .......+.+|..+++.++||||+++++++.+.+..++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 56888999999999999999875 689999999975432 1233566788999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++|+|.++++. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.+|.+||+|||+++....
T Consensus 86 e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~ 158 (318)
T 1fot_A 86 DYIEGGELFSLLRK----SQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158 (318)
T ss_dssp CCCCSCBHHHHHHH----TSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred eCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence 99999999999973 46789999999999999999999999 999999999999999999999999999986543
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
. ....+||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...++...
T Consensus 159 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~----------------~~~~i~~~ 218 (318)
T 1fot_A 159 V----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK----------------TYEKILNA 218 (318)
T ss_dssp C----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH----------------HHHHHHHC
T ss_pred c----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH----------------HHHHHHhC
Confidence 2 234679999999999999999999999999999999999999997643211 11122222
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRP-----PMSEVVQA 685 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~ell~~ 685 (720)
. ..++...+.++.+++.+||+.||++|| +++|++++
T Consensus 219 ~--~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 219 E--LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp C--CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred C--CCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 1 224555677899999999999999999 88998865
No 81
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.9e-42 Score=364.40 Aligned_cols=269 Identities=25% Similarity=0.390 Sum_probs=215.0
Q ss_pred HHHhcCCCccceeccCCCcEEEEEEEc------CCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEe
Q 005001 406 QTATNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCA 478 (720)
Q Consensus 406 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 478 (720)
+...++|...+.||+|+||.||+|.+. ++..||+|.+.... .......+.+|+.+++++ +||||+++++++.
T Consensus 41 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 119 (344)
T 1rjb_A 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGACT 119 (344)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 334578899999999999999999862 45689999997543 333456789999999999 8999999999999
Q ss_pred ecCeEEEEEEecCCCCHHHHhhhccCC-------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEe
Q 005001 479 EHGQRLLVYEYVGNGNLHDMLHFADDS-------------------SKNLTWNARVRVALGTARALEYLHEVCLPSVVHR 539 (720)
Q Consensus 479 ~~~~~~lV~e~~~~gsL~~~l~~~~~~-------------------~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~ 539 (720)
..+..++||||+++|+|.+++...... ...+++..+..++.|++.||+|||+. +|+||
T Consensus 120 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~ 196 (344)
T 1rjb_A 120 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHR 196 (344)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEET
T ss_pred eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccC
Confidence 999999999999999999999743211 13489999999999999999999999 99999
Q ss_pred cCCCCCEEeCCCCceEEcccCCCccCCCCCc-cccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCC
Q 005001 540 NFKSANILLDDELNPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (720)
Q Consensus 540 Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~ 617 (720)
||||+||+++.++.+||+|||++........ .......||+.|+|||.+.+..++.++|||||||++|||+| |..||.
T Consensus 197 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 276 (344)
T 1rjb_A 197 DLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP 276 (344)
T ss_dssp TCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred CCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcc
Confidence 9999999999999999999999976543322 22334568889999999999999999999999999999998 999997
Q ss_pred CCCCcchhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhc
Q 005001 618 SSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRAS 694 (720)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 694 (720)
...... ...+.+........+...+..+.+++.+||+.||++||++.+++++|+.+.....
T Consensus 277 ~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 337 (344)
T 1rjb_A 277 GIPVDA----------------NFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE 337 (344)
T ss_dssp TCCCSH----------------HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred cCCcHH----------------HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHH
Confidence 654321 1112222223333455667889999999999999999999999999999876554
No 82
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.7e-41 Score=355.30 Aligned_cols=269 Identities=24% Similarity=0.405 Sum_probs=210.1
Q ss_pred HHHHhcCCCccceeccCCCcEEEEEEEc----CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec
Q 005001 405 LQTATNSFSQEFLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH 480 (720)
Q Consensus 405 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 480 (720)
+....++|...+.||+|+||.||+|... ++..||+|++............+.+|+.++++++||||+++++++...
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 108 (313)
T 3brb_A 29 VVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM 108 (313)
T ss_dssp TBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-
T ss_pred cccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeec
Confidence 3445577889999999999999999764 345899999987665666678899999999999999999999998775
Q ss_pred C-----eEEEEEEecCCCCHHHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCc
Q 005001 481 G-----QRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN 553 (720)
Q Consensus 481 ~-----~~~lV~e~~~~gsL~~~l~~~~--~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~ 553 (720)
+ ..++||||+++|+|.+++.... .....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.
T Consensus 109 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~ 185 (313)
T 3brb_A 109 SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMT 185 (313)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSC
T ss_pred cccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCc
Confidence 4 3599999999999999985432 2346799999999999999999999999 9999999999999999999
Q ss_pred eEEcccCCCccCCCCCcc-ccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhh
Q 005001 554 PHLSDCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWA 631 (720)
Q Consensus 554 ~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~ 631 (720)
+||+|||++......... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||..........
T Consensus 186 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~----- 260 (313)
T 3brb_A 186 VCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYD----- 260 (313)
T ss_dssp EEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH-----
T ss_pred EEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHH-----
Confidence 999999999765433221 1233467889999999999999999999999999999999 889997644321111
Q ss_pred ccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 632 TPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
... .......+...+..+.+++.+||+.||++||++.+++++|+++.+.-
T Consensus 261 -----------~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 261 -----------YLL-HGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp -----------HHH-TTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -----------HHH-cCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 111 11122344566778999999999999999999999999999998754
No 83
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.4e-41 Score=368.38 Aligned_cols=253 Identities=23% Similarity=0.360 Sum_probs=207.6
Q ss_pred hcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCC--CCCccccceEEeecCeEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR--HPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lV 486 (720)
..+|++.+.||+|+||.||+|...+++.||||++............+.+|+.++++++ ||||+++++++...+..++|
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 3468999999999999999999888999999999766556666788999999999996 59999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|| +.+++|.+++.. ...+++.++..++.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+++...
T Consensus 135 ~E-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp EE-CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred Ee-cCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 99 567899999973 45789999999999999999999999 999999999999995 5799999999998765
Q ss_pred CCCcc-ccccccccccccCcccccc-----------CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccc
Q 005001 567 NTERQ-VSTQMVGAFGYSAPEFALS-----------GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQ 634 (720)
Q Consensus 567 ~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 634 (720)
..... .....+||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~------------ 273 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ------------ 273 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH------------
T ss_pred CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH------------
Confidence 43222 2344679999999999875 46899999999999999999999999753321
Q ss_pred cccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 635 LHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
...+..+++......++...+..+.+||.+||+.||++||++.|++++
T Consensus 274 ---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 274 ---ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp ---HHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---HHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 122333344444444455556788999999999999999999999976
No 84
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.3e-41 Score=355.80 Aligned_cols=272 Identities=21% Similarity=0.373 Sum_probs=216.2
Q ss_pred hcCCCccceeccCCCcEEEEEEE-----cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec--C
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEF-----ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--G 481 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~ 481 (720)
.++|+..+.||+|+||.||+|.+ .+++.||+|++.... .......+.+|+.+++.++||||+++++++... .
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 98 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 98 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---C
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCc
Confidence 34588899999999999999984 368999999997543 233457789999999999999999999999876 6
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCC
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 561 (720)
..++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 99 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~ 172 (302)
T 4e5w_A 99 GIKLIMEFLPSGSLKEYLPK---NKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGL 172 (302)
T ss_dssp CEEEEEECCTTCBHHHHHHH---HTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred eEEEEEEeCCCCcHHHHHHh---ccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccc
Confidence 68999999999999999963 245699999999999999999999999 999999999999999999999999999
Q ss_pred CccCCCCCc--cccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcc--cccc
Q 005001 562 AALTPNTER--QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATP--QLHD 637 (720)
Q Consensus 562 a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~--~~~~ 637 (720)
+........ .......||..|+|||.+.+..++.++||||||+++|||++|..|+.... ........+ ....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~~~~~~ 248 (302)
T 4e5w_A 173 TKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPM----ALFLKMIGPTHGQMT 248 (302)
T ss_dssp CEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH----HHHHHHHCSCCGGGH
T ss_pred cccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchh----hHHhhccCCcccccC
Confidence 987654432 22334568889999999999999999999999999999999999864321 111111111 1111
Q ss_pred HHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHH
Q 005001 638 IDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQ 691 (720)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~ 691 (720)
.......+........+...+..+.+++.+||+.||++|||+.++++.|+++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll~ 302 (302)
T 4e5w_A 249 VTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK 302 (302)
T ss_dssp HHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred HHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhC
Confidence 222333333334444566778899999999999999999999999999998864
No 85
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.5e-41 Score=356.42 Aligned_cols=274 Identities=24% Similarity=0.375 Sum_probs=219.3
Q ss_pred CCccceeccCCCcEEEEEEEc-----CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec--CeEE
Q 005001 412 FSQEFLIGEGSLGRVYRAEFA-----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQRL 484 (720)
Q Consensus 412 y~~~~~lG~G~fg~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 484 (720)
|+..+.||+|+||.||++.+. +++.||+|++.... .......+.+|++++++++||||+++++++.+. ...+
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 111 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA-GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ 111 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc-ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence 488899999999999988643 68899999997553 445567899999999999999999999999874 5789
Q ss_pred EEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
+||||+++|+|.+++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 112 lv~e~~~~~~L~~~l~-----~~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 183 (318)
T 3lxp_A 112 LVMEYVPLGSLRDYLP-----RHSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKA 183 (318)
T ss_dssp EEECCCTTCBHHHHGG-----GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEecccCCcHHHHHh-----hCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccc
Confidence 9999999999999996 34599999999999999999999999 999999999999999999999999999987
Q ss_pred CCCCCcc--ccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 565 TPNTERQ--VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 565 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
....... ......||+.|+|||++.+..++.++||||||+++|||++|..||....... .....+.. .......+.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~-~~~~~~~~-~~~~~~~~~ 261 (318)
T 3lxp_A 184 VPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKF-LELIGIAQ-GQMTVLRLT 261 (318)
T ss_dssp CCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH-HHHHCSCC-HHHHHHHHH
T ss_pred ccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhh-hhhhcccc-cchhHHHHH
Confidence 6543322 2234568889999999999999999999999999999999999986422110 00000000 001112233
Q ss_pred hhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhccc
Q 005001 643 KMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVV 696 (720)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~~~ 696 (720)
+.+........+..++..+.+++.+||+.||++||++.|+++.|+++.++....
T Consensus 262 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~ 315 (318)
T 3lxp_A 262 ELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQ 315 (318)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC-
T ss_pred HHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccC
Confidence 333444444556677889999999999999999999999999999998876543
No 86
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.1e-41 Score=353.43 Aligned_cols=266 Identities=15% Similarity=0.207 Sum_probs=214.1
Q ss_pred hcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV 486 (720)
.++|+..+.||+|+||.||+|.+ .+++.||+|++.... ....+.+|+..++.+ +|+|++++++++......++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 84 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV 84 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC----ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEE
Confidence 46799999999999999999986 578999999986432 234567888999988 899999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCc-----eEEcccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN-----PHLSDCGL 561 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~-----~kl~Dfg~ 561 (720)
|||+ +++|.++++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+
T Consensus 85 ~e~~-~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~ 157 (298)
T 1csn_A 85 IDLL-GPSLEDLLDLC---GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM 157 (298)
T ss_dssp EECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTT
T ss_pred EEec-CCCHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcc
Confidence 9999 89999999742 45699999999999999999999999 9999999999999987776 99999999
Q ss_pred CccCCCCCcc------ccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcccc
Q 005001 562 AALTPNTERQ------VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQL 635 (720)
Q Consensus 562 a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~ 635 (720)
+......... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...............
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~---- 233 (298)
T 1csn_A 158 VKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERI---- 233 (298)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHH----
T ss_pred ccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHH----
Confidence 9866543221 123457999999999999999999999999999999999999999875543222211100
Q ss_pred ccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhcc
Q 005001 636 HDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASV 695 (720)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~~ 695 (720)
................+..+.+++.+||+.||++||++++|++.|+++.++...
T Consensus 234 ------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~ 287 (298)
T 1csn_A 234 ------GEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNT 287 (298)
T ss_dssp ------HHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred ------HhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCC
Confidence 000000000001123457889999999999999999999999999999886643
No 87
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.4e-41 Score=363.87 Aligned_cols=252 Identities=27% Similarity=0.404 Sum_probs=208.7
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
.++|+..+.||+|+||.||+|... +++.||+|++..... .......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 357888999999999999999775 588999999865432 223456788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||+.+|+|.++++ ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++....
T Consensus 94 ~e~~~gg~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 166 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQ----QNVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166 (384)
T ss_dssp ECCCTTEEHHHHHH----TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EecCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence 99999999999997 356799999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCccccccccccccccCcccccc---CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHh
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALS---GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAK 643 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (720)
... .....+||+.|+|||++.+ ..++.++|||||||++|||++|+.||............. .
T Consensus 167 ~~~--~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~-------------~ 231 (384)
T 4fr4_A 167 RET--QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVH-------------T 231 (384)
T ss_dssp TTC--CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHH-------------H
T ss_pred CCC--ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHH-------------H
Confidence 332 2345689999999999974 458999999999999999999999997654332221111 1
Q ss_pred hcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCC-HHHHHH
Q 005001 644 MVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPP-MSEVVQ 684 (720)
Q Consensus 644 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~ell~ 684 (720)
+. .....++...+..+.+||.+||+.||++||+ ++++++
T Consensus 232 ~~--~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 232 FE--TTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp HH--HCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred Hh--hcccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 11 1122345566788999999999999999998 666654
No 88
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=9.5e-42 Score=360.78 Aligned_cols=260 Identities=24% Similarity=0.394 Sum_probs=208.1
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcE----EEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKI----MAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (720)
.++|+..+.||+|+||.||+|.+. +++. ||+|.+.... .......+.+|+.++++++||||+++++++. .+..
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 89 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS-GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSL 89 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT-SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc-cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCcc
Confidence 356888999999999999999765 3443 7888775432 2223345678899999999999999999886 5678
Q ss_pred EEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
++||||+.+|+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 90 ~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 163 (325)
T 3kex_A 90 QLVTQYLPLGSLLDHVRQ---HRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVAD 163 (325)
T ss_dssp EEEEECCTTCBSHHHHHS---SGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGG
T ss_pred EEEEEeCCCCCHHHHHHH---ccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCccc
Confidence 999999999999999973 235788999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCcc-ccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHH
Q 005001 564 LTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDAL 641 (720)
Q Consensus 564 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (720)
........ ......||+.|+|||++.+..++.++|||||||++|||++ |+.||...........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~-------------- 229 (325)
T 3kex_A 164 LLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDL-------------- 229 (325)
T ss_dssp GSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHH--------------
T ss_pred ccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHH--------------
Confidence 76544322 2344568889999999999999999999999999999999 9999986543322111
Q ss_pred HhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 642 AKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
+........+..++..+.+++.+||+.||++||++.+++++|.++....
T Consensus 230 ---~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~ 278 (325)
T 3kex_A 230 ---LEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 278 (325)
T ss_dssp ---HHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred ---HHcCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 1112222334445667889999999999999999999999999986643
No 89
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.9e-41 Score=361.30 Aligned_cols=247 Identities=23% Similarity=0.349 Sum_probs=209.7
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
++|+..+.||+|+||.||+|.+. +|+.||+|++..... .......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57888999999999999999875 689999999965432 2234567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++|+|.+++.. .+.+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 121 e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 121 EYVAGGEMFSHLRR----IGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp ECCTTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred cCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccC
Confidence 99999999999973 35689999999999999999999999 999999999999999999999999999986543
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
. ....+||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...++...
T Consensus 194 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~----------------~~~~i~~~ 253 (350)
T 1rdq_E 194 R----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ----------------IYEKIVSG 253 (350)
T ss_dssp C----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----------------HHHHHHHC
T ss_pred C----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH----------------HHHHHHcC
Confidence 2 234679999999999999999999999999999999999999997643211 11122211
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPP-----MSEVVQA 685 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~ell~~ 685 (720)
. ..+|...+..+.++|.+||+.||++||+ ++|++++
T Consensus 254 ~--~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 254 K--VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp C--CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred C--CCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 1 2345566788999999999999999998 8888865
No 90
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2e-41 Score=358.23 Aligned_cols=255 Identities=22% Similarity=0.309 Sum_probs=208.2
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccCh----HHHHHHHHHHHHhhcCCCCCccccceEEeecCe
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL----QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (720)
..++|...+.||+|+||.||+|... +|+.||+|.+....... .....+.+|+.++++++||||+++++++...+.
T Consensus 9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 88 (326)
T 2y0a_A 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88 (326)
T ss_dssp HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence 3456889999999999999999875 68999999987543321 135678899999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCC----ceEEcc
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL----NPHLSD 558 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~----~~kl~D 558 (720)
.++||||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|
T Consensus 89 ~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~D 161 (326)
T 2y0a_A 89 VILILELVAGGELFDFLA----EKESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIID 161 (326)
T ss_dssp EEEEEECCCSCBHHHHHT----TSSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECC
T ss_pred EEEEEEcCCCCCHHHHHH----hcCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEE
Confidence 999999999999999996 346799999999999999999999999 999999999999999887 799999
Q ss_pred cCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccH
Q 005001 559 CGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDI 638 (720)
Q Consensus 559 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 638 (720)
||++....... ......||+.|+|||++.+..++.++|||||||++|||++|..||...........+....
T Consensus 162 fg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~------ 233 (326)
T 2y0a_A 162 FGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVN------ 233 (326)
T ss_dssp CTTCEECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTC------
T ss_pred CCCCeECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcC------
Confidence 99998764322 2234579999999999999999999999999999999999999997643221111110000
Q ss_pred HHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 639 DALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
...........+..+.+++.+||+.||++|||+.|++++
T Consensus 234 --------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 234 --------YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp --------CCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred --------CCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000000012345678899999999999999999999975
No 91
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.4e-41 Score=358.90 Aligned_cols=271 Identities=22% Similarity=0.366 Sum_probs=220.5
Q ss_pred hhcHHHHhcCCCccceeccCCCcEEEEEEEc------CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccce
Q 005001 402 VASLQTATNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAG 475 (720)
Q Consensus 402 ~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~ 475 (720)
..+++...++|...+.||+|+||.||+|.+. +++.||+|.+.... .......+.+|+.+++.++||||+++++
T Consensus 17 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 95 (322)
T 1p4o_A 17 PDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLG 95 (322)
T ss_dssp CCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS-CHHHHHHHHHHHHHGGGCCCTTBCCEEE
T ss_pred hhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc-CHHHHHHHHHHHHHHHhcCCCCEeeeEE
Confidence 3455566788999999999999999999764 36789999997543 4455667899999999999999999999
Q ss_pred EEeecCeEEEEEEecCCCCHHHHhhhccC------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeC
Q 005001 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADD------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD 549 (720)
Q Consensus 476 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~ 549 (720)
++...+..++||||+++|+|.++++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 96 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~ 172 (322)
T 1p4o_A 96 VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVA 172 (322)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEEC
T ss_pred EEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEc
Confidence 99999999999999999999999975321 125679999999999999999999999 999999999999999
Q ss_pred CCCceEEcccCCCccCCCCCc-cccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhH
Q 005001 550 DELNPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSL 627 (720)
Q Consensus 550 ~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~ 627 (720)
.++.+||+|||++........ .......||+.|+|||++.+..++.++||||||+++|||++ |..||.......
T Consensus 173 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---- 248 (322)
T 1p4o_A 173 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ---- 248 (322)
T ss_dssp TTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH----
T ss_pred CCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHH----
Confidence 999999999999975533221 12233467899999999999999999999999999999999 889997543211
Q ss_pred HHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 628 VRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
....+.. ......+...+..+.+++.+||+.||++||++.|+++.|+++.+..
T Consensus 249 ------------~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~ 301 (322)
T 1p4o_A 249 ------------VLRFVME-GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 301 (322)
T ss_dssp ------------HHHHHHT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTT
T ss_pred ------------HHHHHHc-CCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccC
Confidence 1111111 1112234566778999999999999999999999999998875544
No 92
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=8.5e-41 Score=351.02 Aligned_cols=267 Identities=22% Similarity=0.367 Sum_probs=207.7
Q ss_pred hcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccc-cChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAA-LSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
.++|+..+.||+|+||.||+|.. .+|+.||+|++.... ........+.+|+.++++++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 35688999999999999999976 478999999997533 2445567889999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||+++++|.+++.........+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999999976555567899999999999999999999999 99999999999999999999999999987654
Q ss_pred CCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
.... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||......... .......
T Consensus 188 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~--------------~~~~~~~ 252 (310)
T 2wqm_A 188 SKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS--------------LCKKIEQ 252 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHH--------------HHHHHHT
T ss_pred CCCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHH--------------HHHHhhc
Confidence 3322 223457899999999999999999999999999999999999999754321111 1111111
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
...........+..+.+++.+||+.||++||++.++++.|+++....
T Consensus 253 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~ 299 (310)
T 2wqm_A 253 CDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACT 299 (310)
T ss_dssp TCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhh
Confidence 11111122445678999999999999999999999999999986654
No 93
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7e-41 Score=347.64 Aligned_cols=262 Identities=22% Similarity=0.331 Sum_probs=216.0
Q ss_pred cCCCccc-eeccCCCcEEEEEEEc---CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 410 NSFSQEF-LIGEGSLGRVYRAEFA---NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 410 ~~y~~~~-~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
++|.+.+ .||+|+||.||+|.+. ++..||+|++.... .....+.+.+|++++++++||||+++++++ ..+..++
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc-chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 4455555 8999999999999753 57889999997643 445567899999999999999999999998 5567899
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
||||+++++|.+++.. ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 87 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160 (287)
T ss_dssp EEECCTTEEHHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEeCCCCCHHHHHHh---CCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeee
Confidence 9999999999999862 346799999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCccc--cccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 566 PNTERQV--STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 566 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
....... .....||+.|+|||++.+..++.++||||||+++|||++ |+.||.........
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~----------------- 223 (287)
T 1u59_A 161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM----------------- 223 (287)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHH-----------------
T ss_pred ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHH-----------------
Confidence 5433222 223457899999999999999999999999999999999 99999765432111
Q ss_pred hhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhccc
Q 005001 643 KMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVV 696 (720)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~~~ 696 (720)
..+........+...+..+.+++.+||+.||++||++.+++++|+++.......
T Consensus 224 ~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 277 (287)
T 1u59_A 224 AFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 277 (287)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHhcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCc
Confidence 111112223345667788999999999999999999999999999998766433
No 94
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=7.5e-42 Score=363.38 Aligned_cols=253 Identities=23% Similarity=0.367 Sum_probs=207.7
Q ss_pred HHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeE
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQR 483 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 483 (720)
...++|...+.||+|+||.||+|++. +|+.||+|+++.... .......+..|..++..+ +||||+++++++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 34578999999999999999999875 688999999975432 122345677888888776 999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
++||||+++|+|.++++. ...+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 94 ~lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~ 166 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQS----CHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK 166 (345)
T ss_dssp EEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhh
Confidence 999999999999999973 35789999999999999999999999 99999999999999999999999999997
Q ss_pred cCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHh
Q 005001 564 LTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAK 643 (720)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (720)
...... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..+
T Consensus 167 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~----------------~~~ 229 (345)
T 1xjd_A 167 ENMLGD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL----------------FHS 229 (345)
T ss_dssp CCCCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----------------HHH
T ss_pred hcccCC-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHH----------------HHH
Confidence 543222 223456899999999999999999999999999999999999999976432211 111
Q ss_pred hcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHH-HHHHH
Q 005001 644 MVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMS-EVVQA 685 (720)
Q Consensus 644 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-ell~~ 685 (720)
+... ...++...+.++.+++.+||+.||++||++. +++++
T Consensus 230 i~~~--~~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 230 IRMD--NPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp HHHC--CCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred HHhC--CCCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 1111 1224455677899999999999999999997 66643
No 95
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2.3e-41 Score=356.12 Aligned_cols=271 Identities=24% Similarity=0.404 Sum_probs=219.5
Q ss_pred cHHHHhcCCCccceeccCCCcEEEEEEE------cCCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceE
Q 005001 404 SLQTATNSFSQEFLIGEGSLGRVYRAEF------ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGY 476 (720)
Q Consensus 404 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~ 476 (720)
.+....++|+..+.||+|+||.||+|.+ .+++.||+|++.... .......+.+|+.++.++ +||||++++++
T Consensus 21 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 99 (316)
T 2xir_A 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGA 99 (316)
T ss_dssp HHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred ceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC-CcHHHHHHHHHHHHHHhcccCCCeeeEEEE
Confidence 3444567899999999999999999975 346889999997543 344567789999999999 79999999999
Q ss_pred EeecC-eEEEEEEecCCCCHHHHhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCC
Q 005001 477 CAEHG-QRLLVYEYVGNGNLHDMLHFADDS------------SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKS 543 (720)
Q Consensus 477 ~~~~~-~~~lV~e~~~~gsL~~~l~~~~~~------------~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp 543 (720)
+...+ ..++||||+++|+|.+++...... ...+++..+..++.|++.||+|||+. +|+||||||
T Consensus 100 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp 176 (316)
T 2xir_A 100 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 176 (316)
T ss_dssp ECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred EecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCcc
Confidence 87754 589999999999999999743221 12389999999999999999999999 999999999
Q ss_pred CCEEeCCCCceEEcccCCCccCCCCCc-cccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCC
Q 005001 544 ANILLDDELNPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRP 621 (720)
Q Consensus 544 ~NIll~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~ 621 (720)
+||+++.++.+||+|||+++....... .......||+.|+|||++.+..++.++||||||+++|||++ |..||.....
T Consensus 177 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~ 256 (316)
T 2xir_A 177 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 256 (316)
T ss_dssp GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC
T ss_pred ceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccch
Confidence 999999999999999999986644332 22334568899999999999999999999999999999998 9999976543
Q ss_pred cchhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhc
Q 005001 622 RSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRAS 694 (720)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 694 (720)
.... .+.+........+...+..+.+++.+||+.||++||++.|++++|+++++...
T Consensus 257 ~~~~----------------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 313 (316)
T 2xir_A 257 DEEF----------------CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313 (316)
T ss_dssp SHHH----------------HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred hHHH----------------HHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 2111 11111111223344566789999999999999999999999999999987654
No 96
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=5.2e-41 Score=355.47 Aligned_cols=264 Identities=26% Similarity=0.441 Sum_probs=212.9
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEE--EEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIM--AVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~v--avK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 485 (720)
++|+..+.||+|+||.||+|.+. ++..+ |+|.+.... .......+.+|+.+++++ +||||+++++++...+..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc-chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 57888999999999999999765 56544 889886432 334456788999999999 99999999999999999999
Q ss_pred EEEecCCCCHHHHhhhcc------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCc
Q 005001 486 VYEYVGNGNLHDMLHFAD------------DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN 553 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~------------~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~ 553 (720)
||||+++|+|.+++.... .....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCe
Confidence 999999999999997432 2235799999999999999999999999 9999999999999999999
Q ss_pred eEEcccCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhc
Q 005001 554 PHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWAT 632 (720)
Q Consensus 554 ~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~ 632 (720)
+||+|||+++..... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.......
T Consensus 181 ~kL~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~--------- 249 (327)
T 1fvr_A 181 AKIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--------- 249 (327)
T ss_dssp EEECCTTCEESSCEE--CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---------
T ss_pred EEEcccCcCcccccc--ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH---------
Confidence 999999998743221 11223457889999999999999999999999999999998 999997643211
Q ss_pred cccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhccc
Q 005001 633 PQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVV 696 (720)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~~~ 696 (720)
....+........+...+..+.+++.+||+.||++||++.++++.|.++.++....
T Consensus 250 --------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~ 305 (327)
T 1fvr_A 250 --------LYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTY 305 (327)
T ss_dssp --------HHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSCS
T ss_pred --------HHHHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcCc
Confidence 11111222233345566788999999999999999999999999999998877544
No 97
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3.1e-41 Score=351.07 Aligned_cols=264 Identities=26% Similarity=0.365 Sum_probs=214.6
Q ss_pred hcCCCccc-eeccCCCcEEEEEEEc---CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEE
Q 005001 409 TNSFSQEF-LIGEGSLGRVYRAEFA---NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (720)
Q Consensus 409 ~~~y~~~~-~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (720)
.++|...+ .||+|+||.||+|.+. +++.||+|++..........+.+.+|+.+++.++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 35677777 9999999999999553 468899999986654555577899999999999999999999998 567889
Q ss_pred EEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
+||||+++++|.++++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 94 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 166 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKA 166 (291)
T ss_dssp EEEECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEeCCCCCHHHHHHh----CcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence 99999999999999973 45689999999999999999999999 999999999999999999999999999987
Q ss_pred CCCCCcccc--ccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHH
Q 005001 565 TPNTERQVS--TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDAL 641 (720)
Q Consensus 565 ~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (720)
......... ....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....... .
T Consensus 167 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----------------~ 229 (291)
T 1xbb_A 167 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-----------------V 229 (291)
T ss_dssp CCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-----------------H
T ss_pred eccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH-----------------H
Confidence 654433222 22346789999999999999999999999999999999 999997643221 1
Q ss_pred HhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhcccc
Q 005001 642 AKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVK 697 (720)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~~~~ 697 (720)
...+........+...+..+.+++.+||+.||++||++.++++.|+++......+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~ 285 (291)
T 1xbb_A 230 TAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNEG 285 (291)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhhcc
Confidence 11111122233455677889999999999999999999999999999987765443
No 98
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=4.5e-41 Score=357.93 Aligned_cols=259 Identities=22% Similarity=0.336 Sum_probs=208.7
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV 486 (720)
++|+..+.||+|+||.||+|++. +++.||+|++..... .......+.+|..++.++ +||||+++++++.+.+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 56888999999999999999875 588999999976543 344456788899999887 899999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 89 ~e~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~ 161 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161 (345)
T ss_dssp ECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred EeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecccccccc
Confidence 999999999999973 35799999999999999999999999 99999999999999999999999999997643
Q ss_pred CCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ..........+..
T Consensus 162 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-------~~~~~~~~~~i~~ 233 (345)
T 3a8x_A 162 RPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD-------QNTEDYLFQVILE 233 (345)
T ss_dssp CTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC--------------CHHHHHHHHHH
T ss_pred CCC-CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccc-------cccHHHHHHHHHc
Confidence 322 22345689999999999999999999999999999999999999997532211000 0000011111111
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCCCH------HHHHHH
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRPPM------SEVVQA 685 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~ell~~ 685 (720)
. ...+|...+..+.+++.+||+.||++||++ .|++++
T Consensus 234 ~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 234 K--QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp C--CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred C--CCCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 1 123455677889999999999999999996 566654
No 99
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8.5e-42 Score=361.60 Aligned_cols=249 Identities=27% Similarity=0.397 Sum_probs=207.0
Q ss_pred hcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccCh-HHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSL-QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
.++|.+.+.||+|+||.||+|.+ .+++.||+|++....... .....+.+|+.+++.++||||+++++++...+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 35789999999999999999987 578999999986543221 2235688999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||+ +|+|.+++.. .+.+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++....
T Consensus 88 ~E~~-~g~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~ 159 (336)
T 3h4j_B 88 IEYA-GGELFDYIVE----KKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMT 159 (336)
T ss_dssp ECCC-CEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred EECC-CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence 9999 6799998863 46799999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCccccccccccccccCccccccCCC-cccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSGIY-TVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
... .....+||+.|+|||++.+..+ +.++|||||||++|||++|+.||.......... + +
T Consensus 160 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~----------------~-i 220 (336)
T 3h4j_B 160 DGN--FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK----------------K-V 220 (336)
T ss_dssp TSB--TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC----------------C-C
T ss_pred CCc--ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH----------------H-H
Confidence 332 2344579999999999998876 689999999999999999999997643221110 0 0
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
. ......|...+..+.+|+++||+.||.+|||++|++++
T Consensus 221 ~-~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 221 N-SCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp C-SSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred H-cCCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 0 11122345567788999999999999999999999976
No 100
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.6e-41 Score=355.03 Aligned_cols=264 Identities=25% Similarity=0.421 Sum_probs=211.2
Q ss_pred hcCCCccceeccCCCcEEEEEEEcC-----CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFAN-----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (720)
.++|...+.||+|+||.||+|.+.. +..||+|++.... .......+.+|+.++++++||||+++++++...+..
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 121 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPM 121 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCc
Confidence 3567788999999999999997653 2359999997543 445566789999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
++||||+++|+|.+++.. ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 122 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 195 (333)
T 1mqb_A 122 MIITEYMENGALDKFLRE---KDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSR 195 (333)
T ss_dssp EEEEECCTTEEHHHHHHH---TTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred EEEEeCCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcch
Confidence 999999999999999973 346799999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCcc--ccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHH
Q 005001 564 LTPNTERQ--VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDA 640 (720)
Q Consensus 564 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 640 (720)
........ ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.......
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~----------------- 258 (333)
T 1mqb_A 196 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE----------------- 258 (333)
T ss_dssp ---------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-----------------
T ss_pred hhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH-----------------
Confidence 76443221 1222356889999999999999999999999999999999 999997543211
Q ss_pred HHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhccc
Q 005001 641 LAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVV 696 (720)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~~~ 696 (720)
..+.+........+..++..+.+++.+||+.||++||++.++++.|+++.+.....
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~~ 314 (333)
T 1mqb_A 259 VMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSL 314 (333)
T ss_dssp HHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGGG
T ss_pred HHHHHHCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchhh
Confidence 11111112222345567788999999999999999999999999999998765543
No 101
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.6e-42 Score=371.78 Aligned_cols=259 Identities=21% Similarity=0.246 Sum_probs=209.7
Q ss_pred cHHHHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecC
Q 005001 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG 481 (720)
Q Consensus 404 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 481 (720)
+.....++|+..+.||+|+||.||+|+.. +|+.||+|++.+... .......+.+|..++..++||||+++++++.+.+
T Consensus 55 ~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~ 134 (412)
T 2vd5_A 55 EVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDEN 134 (412)
T ss_dssp HHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred hccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC
Confidence 34445678999999999999999999875 689999999965332 2223345788999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCC
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 561 (720)
..|+||||+++|+|.++++.. +..+++..+..++.||+.||+|||+. +|+||||||+|||++.++++||+|||+
T Consensus 135 ~~~lVmE~~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGl 208 (412)
T 2vd5_A 135 YLYLVMEYYVGGDLLTLLSKF---GERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGS 208 (412)
T ss_dssp EEEEEECCCCSCBHHHHHHHH---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEEEcCCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechh
Confidence 999999999999999999742 35799999999999999999999999 999999999999999999999999999
Q ss_pred CccCCCCCccccccccccccccCccccc-------cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccc
Q 005001 562 AALTPNTERQVSTQMVGAFGYSAPEFAL-------SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQ 634 (720)
Q Consensus 562 a~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 634 (720)
++.............+||+.|+|||++. +..++.++|||||||++|||++|+.||.........
T Consensus 209 a~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~--------- 279 (412)
T 2vd5_A 209 CLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETY--------- 279 (412)
T ss_dssp CEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH---------
T ss_pred heeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHH---------
Confidence 9876554443344568999999999997 356899999999999999999999999764432111
Q ss_pred cccHHHHHhhcccccCCC---CChhHHHHHHHHHHHhcCCCCCCC---CCHHHHHHH
Q 005001 635 LHDIDALAKMVDPALNGM---YPAKSLSRFADIIALCVQPEPEFR---PPMSEVVQA 685 (720)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~R---Ps~~ell~~ 685 (720)
.+++....... .+...+.++.+||++||+ +|++| |+++|++++
T Consensus 280 -------~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 280 -------GKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp -------HHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred -------HHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 11111100001 123456788999999999 99998 589988865
No 102
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=3.8e-41 Score=348.50 Aligned_cols=260 Identities=25% Similarity=0.369 Sum_probs=210.4
Q ss_pred HhcCCCccceeccCCCcEEEEEEEcC----CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFAN----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (720)
..++|...+.||+|+||.||+|.+.+ +..||+|.+.... .....+.+.+|+.++++++||||+++++++.+ +..
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~ 87 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPT 87 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS-CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSC
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc-CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCC
Confidence 34678889999999999999997653 3469999987543 34556789999999999999999999999865 457
Q ss_pred EEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
++||||+++++|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 88 ~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 161 (281)
T 3cc6_A 88 WIIMELYPYGELGHYLER---NKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSR 161 (281)
T ss_dssp EEEEECCTTCBHHHHHHH---HTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGG
T ss_pred EEEEecCCCCCHHHHHHh---ccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCc
Confidence 899999999999999974 245689999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 564 LTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
..............+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...........
T Consensus 162 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~--------------- 226 (281)
T 3cc6_A 162 YIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGV--------------- 226 (281)
T ss_dssp CC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHH---------------
T ss_pred ccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHH---------------
Confidence 765443333344567889999999999999999999999999999998 9999975433221111
Q ss_pred hhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHh
Q 005001 643 KMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQR 692 (720)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~ 692 (720)
+........+...+..+.+++.+||+.||++||++.|+++.|+++.+.
T Consensus 227 --~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 227 --LEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp --HHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --HhcCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 111112223445667899999999999999999999999999988764
No 103
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.6e-41 Score=355.05 Aligned_cols=249 Identities=23% Similarity=0.301 Sum_probs=199.1
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 485 (720)
..++|+..++||+|+||+||+|.+. +|+.||||++............+..|+..+.++ +||||+++++++.+.+..++
T Consensus 55 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 55 FQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 3467999999999999999999876 799999999876655555555666666665554 99999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
||||+ +++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++...
T Consensus 135 v~e~~-~~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~ 207 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAW---GASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVEL 207 (311)
T ss_dssp EEECC-CCBHHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEEC
T ss_pred EEecc-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeec
Confidence 99999 66999988643 45799999999999999999999999 9999999999999999999999999998766
Q ss_pred CCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
.... ......||+.|+|||++.+ .++.++|||||||++|||++|..|+..... ...+.
T Consensus 208 ~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~-------------------~~~~~ 265 (311)
T 3p1a_A 208 GTAG--AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG-------------------WQQLR 265 (311)
T ss_dssp C--------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH-------------------HHHHT
T ss_pred ccCC--CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH-------------------HHHHh
Confidence 4332 2234569999999998876 789999999999999999999776643210 00111
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
........+...+..+.+++.+||+.||++||++.|++++
T Consensus 266 ~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 266 QGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp TTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ccCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 1111111122345778999999999999999999999864
No 104
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=3e-41 Score=361.89 Aligned_cols=253 Identities=21% Similarity=0.319 Sum_probs=197.7
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.++|+..+.||+|+||.||+|... +++.||+|++..... ....+.+|+.+++.++||||+++++++...+..++||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 95 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA---IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIM 95 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT---SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc---ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEE
Confidence 467999999999999999999876 789999999965432 2356789999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCc--eEEcccCCCccC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN--PHLSDCGLAALT 565 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~--~kl~Dfg~a~~~ 565 (720)
||+++|+|.+++.. .+.+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++..
T Consensus 96 e~~~~~~L~~~l~~----~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~ 168 (361)
T 3uc3_A 96 EYASGGELYERICN----AGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSS 168 (361)
T ss_dssp ECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC---
T ss_pred EeCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccc
Confidence 99999999999863 35799999999999999999999999 9999999999999987765 999999998743
Q ss_pred CCCCccccccccccccccCccccccCCCccc-chhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhh
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVK-SDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKM 644 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (720)
... .......||+.|+|||++.+..++.+ +|||||||++|||++|+.||.......... ....++
T Consensus 169 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~------------~~~~~~ 234 (361)
T 3uc3_A 169 VLH--SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYR------------KTIQRI 234 (361)
T ss_dssp --------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHH------------HHHHHH
T ss_pred ccc--CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHH------------HHHHHH
Confidence 222 12234579999999999998887655 899999999999999999997654321111 111222
Q ss_pred cccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 645 VDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 645 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.............+..+.+||.+||+.||++|||+.|++++
T Consensus 235 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 235 LSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp HTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 22222222223456788999999999999999999999976
No 105
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=5.3e-41 Score=364.30 Aligned_cols=272 Identities=22% Similarity=0.317 Sum_probs=209.7
Q ss_pred hcCCCccceeccC--CCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 409 TNSFSQEFLIGEG--SLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 409 ~~~y~~~~~lG~G--~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
.++|++.+.||+| +||.||+|.+. +|+.||+|++............+.+|+.+++.++||||+++++++...+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4678999999999 99999999876 69999999998776666667888999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
||||+++|+|.+++... ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||.+...
T Consensus 104 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTH--FMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEECCTTCBHHHHHHHT--CTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEccCCCCHHHHHhhh--cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 99999999999999742 235699999999999999999999999 9999999999999999999999999988643
Q ss_pred CCCC------ccccccccccccccCcccccc--CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhH-HHhhccccc
Q 005001 566 PNTE------RQVSTQMVGAFGYSAPEFALS--GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSL-VRWATPQLH 636 (720)
Q Consensus 566 ~~~~------~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~-~~~~~~~~~ 636 (720)
.... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||........... .....+...
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLL 258 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC---------
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccc
Confidence 2211 111223478999999999988 6799999999999999999999999976543322110 000000000
Q ss_pred cH-----H-------------HHHhhc---------ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 637 DI-----D-------------ALAKMV---------DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 637 ~~-----~-------------~~~~~~---------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.. . ...... ........+...+..+.+||.+||+.||++|||+.|++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp -----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 00 0 000000 0000111233456779999999999999999999999976
No 106
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=8.8e-41 Score=351.04 Aligned_cols=268 Identities=22% Similarity=0.329 Sum_probs=205.5
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
++|+..+.||+|+||.||+|.+. +|+.||+|++............+.+|+.++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57889999999999999999875 58999999997766555567788899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+++++|.++++ ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 83 ~~~~~~l~~~~~----~~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 155 (311)
T 4agu_A 83 YCDHTVLHELDR----YQRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGP 155 (311)
T ss_dssp CCSEEHHHHHHH----TSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred eCCCchHHHHHh----hhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence 999999999886 346789999999999999999999999 9999999999999999999999999999876533
Q ss_pred CccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcccc-ccHHHHH---h
Q 005001 569 ERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQL-HDIDALA---K 643 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~---~ 643 (720)
.. ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||...........+....... ....... .
T Consensus 156 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (311)
T 4agu_A 156 SD-YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQ 234 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCG
T ss_pred cc-ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccc
Confidence 22 2234579999999999986 668999999999999999999999998765433222221110000 0000000 0
Q ss_pred hcc----cccCCCC-----ChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 644 MVD----PALNGMY-----PAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 644 ~~~----~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
... +...... ....+..+.+++.+||+.||++|||++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 235 YFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp GGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000 0000000 02345678899999999999999999999865
No 107
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=3e-41 Score=362.81 Aligned_cols=276 Identities=17% Similarity=0.232 Sum_probs=210.9
Q ss_pred HhcCCCccceeccCCCcEEEEEEEcC------CcEEEEEEccccccChHHH---------HHHHHHHHHhhcCCCCCccc
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFAN------GKIMAVKKIDNAALSLQEE---------DNFLEAVSNMSRLRHPNIVT 472 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~~~~~~---------~~~~~e~~~l~~l~h~niv~ 472 (720)
..++|++.+.||+|+||.||+|.+.. ++.||+|++.........+ ..+.+|+..+..++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34679999999999999999998764 4789999986543211111 22345666778889999999
Q ss_pred cceEEeec----CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEe
Q 005001 473 LAGYCAEH----GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL 548 (720)
Q Consensus 473 l~~~~~~~----~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll 548 (720)
+++++... ...++||||+ +++|.++++. ....+++.++..++.||+.||+|||+. +|+||||||+|||+
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~---~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill 185 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA---NAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLL 185 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEE
Confidence 99998764 4589999999 9999999973 346799999999999999999999999 99999999999999
Q ss_pred C--CCCceEEcccCCCccCCCCCcc------ccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCC
Q 005001 549 D--DELNPHLSDCGLAALTPNTERQ------VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSR 620 (720)
Q Consensus 549 ~--~~~~~kl~Dfg~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~ 620 (720)
+ .++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||+||+.||....
T Consensus 186 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~ 265 (364)
T 3op5_A 186 NYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNL 265 (364)
T ss_dssp ESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred ecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccc
Confidence 9 8899999999999765432211 1133459999999999999999999999999999999999999998543
Q ss_pred CcchhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhcccc
Q 005001 621 PRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVK 697 (720)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~~~~ 697 (720)
......... .. .....+....+..+. +...+.++.+++..||+.||++||++.+|++.|+++.+......
T Consensus 266 ~~~~~~~~~--~~--~~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~ 335 (364)
T 3op5_A 266 KDPKYVRDS--KI--RYRENIASLMDKCFP---AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKD 335 (364)
T ss_dssp TCHHHHHHH--HH--HHHHCHHHHHHHHSC---TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCC
T ss_pred cCHHHHHHH--HH--HhhhhHHHHHHHhcc---cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCc
Confidence 321111000 00 000111122221111 13446788999999999999999999999999999998765543
No 108
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=2.9e-41 Score=359.98 Aligned_cols=251 Identities=20% Similarity=0.303 Sum_probs=208.4
Q ss_pred hcCCCccceeccCCCcEEEEEEEcC-CcEEEEEEcccccc-ChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 485 (720)
.++|+..+.||+|+||.||+|+... ++.||+|++..... .......+..|..++..+ +||||+++++++.+.+..|+
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 4678999999999999999998864 78899999975432 223356678899999887 89999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
||||+++|+|.++++. .+.+++..+..++.||+.||+|||+. +|+||||||+|||++.+|.+||+|||+++..
T Consensus 99 v~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~ 171 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 171 (353)
T ss_dssp EEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence 9999999999999973 35799999999999999999999999 9999999999999999999999999999764
Q ss_pred CCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
.... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...++.
T Consensus 172 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~----------------~~~~i~ 234 (353)
T 2i0e_A 172 IWDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE----------------LFQSIM 234 (353)
T ss_dssp CCTT-CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----------------HHHHHH
T ss_pred ccCC-cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHH----------------HHHHHH
Confidence 3222 22345689999999999999999999999999999999999999997643211 111222
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHH
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRPP-----MSEVVQA 685 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~ell~~ 685 (720)
... ..+|...+.++.+|+.+||+.||++||+ +++++++
T Consensus 235 ~~~--~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 235 EHN--VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp HCC--CCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred hCC--CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 111 2345567788999999999999999995 5777654
No 109
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.5e-41 Score=361.69 Aligned_cols=261 Identities=26% Similarity=0.430 Sum_probs=202.8
Q ss_pred cCCCccceeccCCCcEEEEEEEc--CC--cEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEee-cCeEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA--NG--KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE-HGQRL 484 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~ 484 (720)
..|...+.||+|+||.||+|.+. ++ ..||+|.+.... .....+.+.+|+.++++++||||+++++++.. ++..+
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~ 167 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 167 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS-CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCE
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeE
Confidence 34667789999999999999764 22 368999886533 34556789999999999999999999998654 56789
Q ss_pred EEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
+||||+++|+|.++++. ....+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 168 lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 241 (373)
T 3c1x_A 168 VVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARD 241 (373)
T ss_dssp EEEECCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEECCCCCCHHHHHhh---cccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccc
Confidence 99999999999999962 345689999999999999999999999 999999999999999999999999999986
Q ss_pred CCCCCcc---ccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHH
Q 005001 565 TPNTERQ---VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDA 640 (720)
Q Consensus 565 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 640 (720)
....... ......+|+.|+|||.+.+..++.++|||||||++|||++ |..||...........+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~------------ 309 (373)
T 3c1x_A 242 MYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL------------ 309 (373)
T ss_dssp ----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHH------------
T ss_pred ccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHH------------
Confidence 5432211 1233467889999999999999999999999999999999 67777654432211111
Q ss_pred HHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhc
Q 005001 641 LAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRAS 694 (720)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 694 (720)
. .......+..++..+.+++.+||+.||++||++.|+++.|+++.....
T Consensus 310 ----~-~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~ 358 (373)
T 3c1x_A 310 ----L-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358 (373)
T ss_dssp ----H-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred ----H-cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 1 111223345667789999999999999999999999999999987664
No 110
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-40 Score=346.31 Aligned_cols=261 Identities=26% Similarity=0.392 Sum_probs=210.5
Q ss_pred CCCccceeccCCCcEEEEEEEcC----CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeE-EE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFAN----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR-LL 485 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~-~l 485 (720)
.|...+.||+|+||.||+|.+.+ +..||+|++.... .....+.+.+|+.++++++||||+++++++...+.. ++
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 100 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT-EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV 100 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc-cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE
Confidence 45667899999999999997643 2379999987533 445567889999999999999999999999876655 99
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
||||+.+|+|.++++. ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 101 v~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 174 (298)
T 3pls_A 101 LLPYMCHGDLLQFIRS---PQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDI 174 (298)
T ss_dssp EECCCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTT
T ss_pred EEecccCCCHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccc
Confidence 9999999999999973 356789999999999999999999999 9999999999999999999999999999765
Q ss_pred CCCCc---cccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 566 PNTER---QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 566 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
..... .......+|+.|+|||.+.+..++.++||||||+++|||++|..|+........ ..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~----------------~~ 238 (298)
T 3pls_A 175 LDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD----------------LT 238 (298)
T ss_dssp TTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG----------------HH
T ss_pred cCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH----------------HH
Confidence 43221 122335688999999999999999999999999999999996665543222111 11
Q ss_pred hhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhc
Q 005001 643 KMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRAS 694 (720)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 694 (720)
..+........+...+..+.+++.+||+.||++|||++++++.|+++.+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~ 290 (298)
T 3pls_A 239 HFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290 (298)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred HHhhcCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHh
Confidence 1111122223345567789999999999999999999999999999987653
No 111
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.7e-41 Score=350.56 Aligned_cols=257 Identities=26% Similarity=0.397 Sum_probs=211.9
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEee--cCeEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE--HGQRLL 485 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~l 485 (720)
.++|+..+.||+|+||.||+|... +++.||+|++..........+.+.+|+.++++++||||+++++++.. .+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 467888999999999999999875 68999999998666566667889999999999999999999998754 578999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-----cEEecCCCCCEEeCCCCceEEcccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS-----VVHRNFKSANILLDDELNPHLSDCG 560 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~-----iiH~Dlkp~NIll~~~~~~kl~Dfg 560 (720)
||||+++++|.+++.........+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 9999999999999986555556799999999999999999999999 7 9999999999999999999999999
Q ss_pred CCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHH
Q 005001 561 LAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDA 640 (720)
Q Consensus 561 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 640 (720)
++....... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||.........
T Consensus 162 ~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--------------- 225 (279)
T 2w5a_A 162 LARILNHDT-SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELA--------------- 225 (279)
T ss_dssp HHHHC---C-HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---------------
T ss_pred hheeecccc-ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHH---------------
Confidence 987654332 1223457899999999999999999999999999999999999999764321111
Q ss_pred HHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 641 LAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
..+.. ......+...+..+.+++.+||+.||++||++.|+++++
T Consensus 226 -~~i~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~ 269 (279)
T 2w5a_A 226 -GKIRE-GKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENP 269 (279)
T ss_dssp -HHHHH-TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred -HHHhh-cccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence 11111 111233455677899999999999999999999999865
No 112
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-40 Score=351.46 Aligned_cols=266 Identities=24% Similarity=0.394 Sum_probs=206.2
Q ss_pred HHHHhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhc--CCCCCccccceEEeec--
Q 005001 405 LQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR--LRHPNIVTLAGYCAEH-- 480 (720)
Q Consensus 405 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~-- 480 (720)
.....++|+..+.||+|+||.||+|.+. ++.||+|++... ....+.+|.+++.. ++||||+++++++...
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~ 105 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT-----EEASWFRETEIYQTVLMRHENILGFIAADIKGTG 105 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG
T ss_pred ccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc-----ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC
Confidence 3445678999999999999999999875 899999998533 23344455555544 4999999999998877
Q ss_pred --CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCcEEecCCCCCEEeCCCCc
Q 005001 481 --GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC-----LPSVVHRNFKSANILLDDELN 553 (720)
Q Consensus 481 --~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-----~~~iiH~Dlkp~NIll~~~~~ 553 (720)
...++||||+++|+|.++++ ...+++..+..++.|++.||+|||+.. .++|+||||||+|||++.++.
T Consensus 106 ~~~~~~lv~e~~~~g~L~~~l~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~ 180 (337)
T 3mdy_A 106 SWTQLYLITDYHENGSLYDYLK-----STTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT 180 (337)
T ss_dssp GGCEEEEEECCCTTCBHHHHHH-----HCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSC
T ss_pred CCCceEEEEeccCCCcHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCC
Confidence 78899999999999999996 346899999999999999999999751 338999999999999999999
Q ss_pred eEEcccCCCccCCCCCccc---cccccccccccCccccccCCCccc------chhhhHHHHHHHHHhC----------CC
Q 005001 554 PHLSDCGLAALTPNTERQV---STQMVGAFGYSAPEFALSGIYTVK------SDVYSFGVVMLELLTG----------RK 614 (720)
Q Consensus 554 ~kl~Dfg~a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~------~DvwSlGv~l~elltg----------~~ 614 (720)
+||+|||++.......... .....||+.|+|||++.+..++.+ +|||||||++|||++| +.
T Consensus 181 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~ 260 (337)
T 3mdy_A 181 CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQL 260 (337)
T ss_dssp EEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccc
Confidence 9999999997654433221 124579999999999988776655 9999999999999999 55
Q ss_pred CCCCCCCcchhhHHHhhccccccHHHHHhhc-ccccCCCCC-----hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Q 005001 615 PLDSSRPRSEQSLVRWATPQLHDIDALAKMV-DPALNGMYP-----AKSLSRFADIIALCVQPEPEFRPPMSEVVQALVR 688 (720)
Q Consensus 615 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~ 688 (720)
||....+... ......... ........+ ..++..+.+++.+||+.||++||++.+++++|++
T Consensus 261 p~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 328 (337)
T 3mdy_A 261 PYHDLVPSDP------------SYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAK 328 (337)
T ss_dssp TTTTTSCSSC------------CHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred cHhhhcCCCC------------chhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHH
Confidence 5544322111 111111111 112222233 2677889999999999999999999999999999
Q ss_pred HHHhh
Q 005001 689 LVQRA 693 (720)
Q Consensus 689 ~~~~~ 693 (720)
+.+..
T Consensus 329 l~~~~ 333 (337)
T 3mdy_A 329 MSESQ 333 (337)
T ss_dssp HHHTT
T ss_pred HHhhc
Confidence 97765
No 113
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3.5e-41 Score=356.56 Aligned_cols=251 Identities=22% Similarity=0.348 Sum_probs=199.1
Q ss_pred hcCCCccceeccCCCcEEEEEEE----cCCcEEEEEEcccccc--ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCe
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEF----ANGKIMAVKKIDNAAL--SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (720)
.++|+..+.||+|+||.||+|+. .+++.||+|+++.... .......+.+|+.+++.++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 35688899999999999999987 4789999999976532 22334567889999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCC
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a 562 (720)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~ 168 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLER----EGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLC 168 (327)
T ss_dssp EEEEEECCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC
T ss_pred EEEEEeCCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcc
Confidence 9999999999999999973 35689999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 563 ALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...
T Consensus 169 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----------------~~~ 231 (327)
T 3a62_A 169 KESIHDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK----------------TID 231 (327)
T ss_dssp -----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----------------HHH
T ss_pred cccccCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH----------------HHH
Confidence 7543322 22334679999999999999999999999999999999999999997643211 111
Q ss_pred hhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 005001 643 KMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRP-----PMSEVVQA 685 (720)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~ell~~ 685 (720)
++.... ...+...+..+.+++.+||+.||++|| ++.|++++
T Consensus 232 ~i~~~~--~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 232 KILKCK--LNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp HHHHTC--CCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred HHHhCC--CCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 111111 123455677899999999999999999 77788775
No 114
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.3e-41 Score=355.24 Aligned_cols=260 Identities=23% Similarity=0.401 Sum_probs=206.9
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCc----EEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGK----IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (720)
.++|+..+.||+|+||.||+|.+. +++ +||+|.+.... .......+.+|+.++++++||||+++++++.... .
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~ 91 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS-SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-E
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc-CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-c
Confidence 367899999999999999999864 344 35777775433 3345678899999999999999999999998654 8
Q ss_pred EEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
++|+||+.+|+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 92 ~~v~~~~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~ 165 (327)
T 3lzb_A 92 QLITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEECCCSSCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred eEEEEecCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCccee
Confidence 899999999999999973 246799999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCcc-ccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHH
Q 005001 564 LTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDAL 641 (720)
Q Consensus 564 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (720)
........ ......||+.|+|||.+.+..++.++|||||||++|||++ |..||........
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~----------------- 228 (327)
T 3lzb_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----------------- 228 (327)
T ss_dssp --------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-----------------
T ss_pred EccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH-----------------
Confidence 76433222 2233457889999999999999999999999999999999 9999976543221
Q ss_pred HhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 642 AKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
...+........+...+..+.+++.+||+.||++||++.|+++.|+++.+..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 280 (327)
T 3lzb_A 229 SSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp HHHHHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred HHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence 1112222233345567778999999999999999999999999999988643
No 115
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1e-40 Score=349.96 Aligned_cols=260 Identities=27% Similarity=0.441 Sum_probs=203.9
Q ss_pred cCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEe
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 489 (720)
++|+..+.||+|+||.||+|.+. ++.||+|++... ...+.+.+|++++++++||||+++++++. +..++||||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~ 80 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE----SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEY 80 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST----THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEEC
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh----hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEc
Confidence 56788899999999999999875 788999999643 34577899999999999999999999876 457999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCc-eEEcccCCCccCCCC
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN-PHLSDCGLAALTPNT 568 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~-~kl~Dfg~a~~~~~~ 568 (720)
+++|+|.++++... ....+++..+..++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||++......
T Consensus 81 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 81 AEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp CTTCBHHHHHHCSS-SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred CCCCCHHHHHhccC-CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 99999999997321 1235789999999999999999999932229999999999999998886 799999998754322
Q ss_pred CccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccc
Q 005001 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPA 648 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (720)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||........... .. ....
T Consensus 160 ----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~--------------~~-~~~~ 220 (307)
T 2eva_A 160 ----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM--------------WA-VHNG 220 (307)
T ss_dssp ---------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHH--------------HH-HHTT
T ss_pred ----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHH--------------HH-HhcC
Confidence 2234699999999999999999999999999999999999999975432211100 00 1111
Q ss_pred cCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhccc
Q 005001 649 LNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVV 696 (720)
Q Consensus 649 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~~~ 696 (720)
.....+...+..+.+++.+||+.||++||++.++++.|+++.+.....
T Consensus 221 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~ 268 (307)
T 2eva_A 221 TRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGA 268 (307)
T ss_dssp CCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCT
T ss_pred CCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCC
Confidence 122233456678899999999999999999999999999987665443
No 116
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1e-40 Score=348.35 Aligned_cols=261 Identities=26% Similarity=0.423 Sum_probs=209.4
Q ss_pred hcCCCccceeccCCCcEEEEEEEcC----CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEe-ecCeE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFAN----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCA-EHGQR 483 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~ 483 (720)
..+|+..+.||+|+||.||+|.+.+ +..||+|.+.... .......+.+|+.++++++||||+++++++. .++..
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 102 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP 102 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC-CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCce
Confidence 4568888999999999999997642 2358999887533 4455678899999999999999999999854 45678
Q ss_pred EEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
++||||+++|+|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 103 ~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~ 176 (298)
T 3f66_A 103 LVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 176 (298)
T ss_dssp EEEEECCTTCBHHHHHHC---TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGC
T ss_pred EEEEeCCCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccc
Confidence 999999999999999962 346789999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCc---cccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHH
Q 005001 564 LTPNTER---QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDID 639 (720)
Q Consensus 564 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 639 (720)
....... .......||+.|+|||.+.+..++.++||||||+++|||++ |.+||...........+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~----------- 245 (298)
T 3f66_A 177 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL----------- 245 (298)
T ss_dssp CCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHH-----------
T ss_pred cccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHH-----------
Confidence 6643321 11234567889999999999999999999999999999999 55566544322111111
Q ss_pred HHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 640 ALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
........+...+..+.+++.+||+.||++||++.|+++.|+++....
T Consensus 246 ------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 293 (298)
T 3f66_A 246 ------LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293 (298)
T ss_dssp ------HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred ------hcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 111122234456678999999999999999999999999999997754
No 117
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2e-41 Score=367.46 Aligned_cols=269 Identities=23% Similarity=0.349 Sum_probs=199.0
Q ss_pred HHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCC-CCCccccceEEeecC--e
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHG--Q 482 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~--~ 482 (720)
...++|+..+.||+|+||.||+|.+. +|+.||+|++............+.+|+.++..+. ||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 45678999999999999999999764 6899999999766556666778889999999996 999999999997544 6
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCC
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a 562 (720)
.|+||||++ ++|.++++ ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 86 ~~lv~e~~~-~~L~~~~~-----~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 156 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIR-----ANILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLS 156 (388)
T ss_dssp EEEEEECCS-EEHHHHHH-----HTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEecccC-cCHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccc
Confidence 899999997 59999886 35789999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCC--------------------CccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCC
Q 005001 563 ALTPNT--------------------ERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRP 621 (720)
Q Consensus 563 ~~~~~~--------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~ 621 (720)
+..... ........+||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~ 236 (388)
T 3oz6_A 157 RSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST 236 (388)
T ss_dssp EESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 765321 1112234679999999999987 6789999999999999999999999987654
Q ss_pred cchhhHHHhhccccccHHHHH---------------hhc---ccccCCC------------CChhHHHHHHHHHHHhcCC
Q 005001 622 RSEQSLVRWATPQLHDIDALA---------------KMV---DPALNGM------------YPAKSLSRFADIIALCVQP 671 (720)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~---------------~~~---~~~~~~~------------~~~~~~~~l~~li~~cl~~ 671 (720)
......+.-.. .......+. ... ....... .+...+.++.+|+.+||+.
T Consensus 237 ~~~~~~i~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~ 315 (388)
T 3oz6_A 237 MNQLERIIGVI-DFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQF 315 (388)
T ss_dssp HHHHHHHHHHH-CCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCS
T ss_pred HHHHHHHHHhc-CCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhcc
Confidence 32222111000 000000000 000 0000000 0113456789999999999
Q ss_pred CCCCCCCHHHHHHH
Q 005001 672 EPEFRPPMSEVVQA 685 (720)
Q Consensus 672 dP~~RPs~~ell~~ 685 (720)
||++|||++|++++
T Consensus 316 dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 316 NPNKRISANDALKH 329 (388)
T ss_dssp SGGGSCCHHHHTTS
T ss_pred CcccCCCHHHHhCC
Confidence 99999999999977
No 118
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.7e-41 Score=351.18 Aligned_cols=264 Identities=22% Similarity=0.299 Sum_probs=204.1
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
.++|+..+.||+|+||.||+|.+. +++.||+|++..... .......+.+|+.++++++||||+++++++...+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 467999999999999999999875 688999999975543 333457789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||+++++|.++++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 113 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 113 MRLINGVDLAAMLRR----QGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EECCCCEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEecCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 999999999999973 35789999999999999999999999 99999999999999999999999999997665
Q ss_pred CCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
...........||+.|+|||.+.+..++.++||||||+++|||++|+.||.......... .......
T Consensus 186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-------------~~~~~~~ 252 (309)
T 2h34_A 186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGA-------------HINQAIP 252 (309)
T ss_dssp -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHH-------------HHHSCCC
T ss_pred ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHH-------------HhccCCC
Confidence 433333345679999999999999999999999999999999999999997543210000 0000000
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCC-CHHHHHHHHHHHHHhhc
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRP-PMSEVVQALVRLVQRAS 694 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~ell~~L~~~~~~~~ 694 (720)
.....+...+..+.+++.+||+.||++|| +++++++.|++.+....
T Consensus 253 --~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 253 --RPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp --CGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred --CccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 01112344566789999999999999999 99999999988766554
No 119
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=380.39 Aligned_cols=260 Identities=22% Similarity=0.332 Sum_probs=210.6
Q ss_pred CCccc-eeccCCCcEEEEEEEc---CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 412 FSQEF-LIGEGSLGRVYRAEFA---NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 412 y~~~~-~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
+...+ .||+|+||.||+|.+. ++..||||+++... .....+.+.+|++++++++||||+++++++.. +..++||
T Consensus 337 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~ 414 (613)
T 2ozo_A 337 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM 414 (613)
T ss_dssp EEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC-SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred eeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence 33344 7999999999999764 46679999997653 33456789999999999999999999999876 5689999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++|+|.+++.. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 415 E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~ 488 (613)
T 2ozo_A 415 EMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGA 488 (613)
T ss_dssp ECCTTCBHHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-
T ss_pred EeCCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccC
Confidence 99999999999963 346799999999999999999999999 999999999999999999999999999987654
Q ss_pred CCcccc--ccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhh
Q 005001 568 TERQVS--TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKM 644 (720)
Q Consensus 568 ~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (720)
...... ....+|+.|+|||++.+..++.++|||||||++|||++ |+.||......... ..
T Consensus 489 ~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~-----------------~~ 551 (613)
T 2ozo_A 489 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM-----------------AF 551 (613)
T ss_dssp -------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHH-----------------HH
T ss_pred CCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH-----------------HH
Confidence 332221 22346689999999999999999999999999999998 99999865432211 11
Q ss_pred cccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhccc
Q 005001 645 VDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVV 696 (720)
Q Consensus 645 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~~~ 696 (720)
+....+...+..++..+.++|.+||+.||++||++.+|++.|+.+.......
T Consensus 552 i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~~ 603 (613)
T 2ozo_A 552 IEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 603 (613)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSCS
T ss_pred HHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhccc
Confidence 2222233456677889999999999999999999999999999987766443
No 120
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.3e-40 Score=344.90 Aligned_cols=252 Identities=22% Similarity=0.325 Sum_probs=211.3
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.++|+..+.||+|+||.||+|.+. +++.||+|++............+.+|+.++++++||||+++++++...+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 578999999999999999999775 5889999999877666667788999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCc---eEEcccCCCcc
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN---PHLSDCGLAAL 564 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~---~kl~Dfg~a~~ 564 (720)
||+++++|.+.+.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++..
T Consensus 85 e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~ 157 (284)
T 3kk8_A 85 DLVTGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157 (284)
T ss_dssp CCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred ecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence 99999999998863 36789999999999999999999999 9999999999999986655 99999999976
Q ss_pred CCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhh
Q 005001 565 TPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKM 644 (720)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (720)
..... ......||+.|+|||++.+..++.++||||||+++|+|++|+.||.......... .+
T Consensus 158 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~----------------~~ 219 (284)
T 3kk8_A 158 VNDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYA----------------QI 219 (284)
T ss_dssp CCSSC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----------------HH
T ss_pred cccCc--cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHH----------------HH
Confidence 64332 2234679999999999999999999999999999999999999997643221111 11
Q ss_pred ccccc--CCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 645 VDPAL--NGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 645 ~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
..... ........+..+.+++.+||+.||++||++.|++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 220 KAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp HHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 11111 111123456778999999999999999999999986
No 121
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=5.8e-41 Score=355.52 Aligned_cols=250 Identities=22% Similarity=0.348 Sum_probs=199.6
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecC------
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG------ 481 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 481 (720)
.++|+..+.||+|+||.||+|.+. +|+.||||++.... .....+.+.+|+.++++++||||+++++++.+.+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 467889999999999999999886 79999999997543 3345678899999999999999999999986543
Q ss_pred ---------------------------------------------------eEEEEEEecCCCCHHHHhhhccCCCCCCC
Q 005001 482 ---------------------------------------------------QRLLVYEYVGNGNLHDMLHFADDSSKNLT 510 (720)
Q Consensus 482 ---------------------------------------------------~~~lV~e~~~~gsL~~~l~~~~~~~~~~~ 510 (720)
..++||||+++|+|.++++... ......
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~ 162 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC-SLEDRE 162 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC-SGGGSC
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc-Cccchh
Confidence 3799999999999999997432 234457
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCc-----------ccccccccc
Q 005001 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER-----------QVSTQMVGA 579 (720)
Q Consensus 511 ~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-----------~~~~~~~gt 579 (720)
+..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... .......||
T Consensus 163 ~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt 239 (332)
T 3qd2_B 163 HGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT 239 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred hHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence 778999999999999999999 999999999999999999999999999987654321 122345799
Q ss_pred ccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCCC---hh
Q 005001 580 FGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYP---AK 656 (720)
Q Consensus 580 ~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 656 (720)
+.|+|||++.+..++.++|||||||++|||++|..|+... . ....... ....+ ..
T Consensus 240 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-----~-------------~~~~~~~----~~~~~~~~~~ 297 (332)
T 3qd2_B 240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-----V-------------RIITDVR----NLKFPLLFTQ 297 (332)
T ss_dssp GGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-----H-------------HHHHHHH----TTCCCHHHHH
T ss_pred cCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-----H-------------HHHHHhh----ccCCCccccc
Confidence 9999999999999999999999999999999987664210 0 0001111 11112 23
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 657 SLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 657 ~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
....+.+++.+||+.||++||++.|++++
T Consensus 298 ~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 298 KYPQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HCHHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred CChhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 44567899999999999999999999864
No 122
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=8.4e-42 Score=384.96 Aligned_cols=260 Identities=29% Similarity=0.474 Sum_probs=216.4
Q ss_pred HHHhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 406 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
+...++|+..+.||+|+||.||+|.+.++..||||+++.... ..+.|.+|++++++++||||+++++++.+ +..++
T Consensus 263 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~l 338 (535)
T 2h8h_A 263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 338 (535)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred ecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceE
Confidence 334567888999999999999999998888999999976443 24678999999999999999999999876 67899
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
||||+++|+|.++++.. ....+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 339 v~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 413 (535)
T 2h8h_A 339 VTEYMSKGSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLI 413 (535)
T ss_dssp EECCCTTEEHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTC
T ss_pred eeehhcCCcHHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceec
Confidence 99999999999999732 235689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhh
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKM 644 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (720)
............+|..|+|||++.+..++.++|||||||++|||++ |+.||....... +...
T Consensus 414 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~-----------------~~~~ 476 (535)
T 2h8h_A 414 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-----------------VLDQ 476 (535)
T ss_dssp CCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH-----------------HHHH
T ss_pred CCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----------------HHHH
Confidence 5322222233457889999999999999999999999999999999 999997643211 1111
Q ss_pred cccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHH
Q 005001 645 VDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQ 691 (720)
Q Consensus 645 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~ 691 (720)
+....+...+..++..+.+||.+||+.||++||++.+|++.|+++..
T Consensus 477 i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 477 VERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred HHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence 12222334456677889999999999999999999999999987754
No 123
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.9e-41 Score=358.41 Aligned_cols=263 Identities=23% Similarity=0.248 Sum_probs=206.9
Q ss_pred cHHHHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc---ChHHHHHHHHHHHHhhcCCCCCccccceEEee
Q 005001 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL---SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE 479 (720)
Q Consensus 404 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 479 (720)
++....++|+..+.||+|+||.||+|... +++.||+|++..... .......+.+|+.++++++||||+++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 45667788999999999999999999774 688999999865432 33456788999999999999999999999999
Q ss_pred cCeEEEEEEecCCCCHHHHhhhccCC------------------------------------CCCCCHHHHHHHHHHHHH
Q 005001 480 HGQRLLVYEYVGNGNLHDMLHFADDS------------------------------------SKNLTWNARVRVALGTAR 523 (720)
Q Consensus 480 ~~~~~lV~e~~~~gsL~~~l~~~~~~------------------------------------~~~~~~~~~~~i~~qi~~ 523 (720)
.+..++||||+++|+|.++++..... ...+++..+..++.|++.
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 99999999999999999998532111 122467788899999999
Q ss_pred HHHHHHhcCCCCcEEecCCCCCEEeCCCC--ceEEcccCCCccCCCCC---ccccccccccccccCcccccc--CCCccc
Q 005001 524 ALEYLHEVCLPSVVHRNFKSANILLDDEL--NPHLSDCGLAALTPNTE---RQVSTQMVGAFGYSAPEFALS--GIYTVK 596 (720)
Q Consensus 524 ~L~~LH~~~~~~iiH~Dlkp~NIll~~~~--~~kl~Dfg~a~~~~~~~---~~~~~~~~gt~~y~aPE~~~~--~~~~~~ 596 (720)
||+|||+. +|+||||||+||+++.++ .+||+|||++....... ........||+.|+|||++.+ ..++.+
T Consensus 180 ~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 256 (345)
T 3hko_A 180 ALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256 (345)
T ss_dssp HHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred HHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence 99999999 999999999999998776 89999999997543221 112344679999999999976 678999
Q ss_pred chhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCC--CChhHHHHHHHHHHHhcCCCCC
Q 005001 597 SDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGM--YPAKSLSRFADIIALCVQPEPE 674 (720)
Q Consensus 597 ~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~ 674 (720)
+|||||||++|||++|+.||....... ...++........ .....+..+.+++.+||+.||+
T Consensus 257 ~DiwslG~il~el~~g~~pf~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 320 (345)
T 3hko_A 257 CDAWSAGVLLHLLLMGAVPFPGVNDAD----------------TISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVD 320 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHHH----------------HHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTT
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCChHH----------------HHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChh
Confidence 999999999999999999997644221 1111111111111 1123567889999999999999
Q ss_pred CCCCHHHHHHH
Q 005001 675 FRPPMSEVVQA 685 (720)
Q Consensus 675 ~RPs~~ell~~ 685 (720)
+||++.+++++
T Consensus 321 ~Rps~~~~l~h 331 (345)
T 3hko_A 321 ERFDAMRALQH 331 (345)
T ss_dssp TSCCHHHHHHS
T ss_pred HCCCHHHHhcC
Confidence 99999999976
No 124
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=2.7e-41 Score=358.57 Aligned_cols=268 Identities=25% Similarity=0.403 Sum_probs=218.7
Q ss_pred HHHhcCCCccceeccCCCcEEEEEEEcC------CcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEe
Q 005001 406 QTATNSFSQEFLIGEGSLGRVYRAEFAN------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCA 478 (720)
Q Consensus 406 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 478 (720)
+...++|...+.||+|+||.||+|.+.. ...||+|.+.... .......+.+|+.+++++ +||||+++++++.
T Consensus 42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-HADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 3345788999999999999999998643 2479999997543 344567789999999999 8999999999999
Q ss_pred ecCeEEEEEEecCCCCHHHHhhhccC----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEe
Q 005001 479 EHGQRLLVYEYVGNGNLHDMLHFADD----------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL 548 (720)
Q Consensus 479 ~~~~~~lV~e~~~~gsL~~~l~~~~~----------~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll 548 (720)
..+..++||||+++|+|.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+||++
T Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~ 197 (333)
T 2i1m_A 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLL 197 (333)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEE
T ss_pred cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEE
Confidence 99999999999999999999974321 135689999999999999999999999 99999999999999
Q ss_pred CCCCceEEcccCCCccCCCCCc-cccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhh
Q 005001 549 DDELNPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQS 626 (720)
Q Consensus 549 ~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~ 626 (720)
+.++.+||+|||++........ .......||+.|+|||++.+..++.++|||||||++|||+| |..||........
T Consensus 198 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-- 275 (333)
T 2i1m_A 198 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK-- 275 (333)
T ss_dssp EGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH--
T ss_pred CCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH--
Confidence 9999999999999976543322 12234567889999999999999999999999999999999 9999976443211
Q ss_pred HHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 627 LVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
..+..........+...+..+.+++.+||+.||.+||++.|+++.|+++.+..
T Consensus 276 --------------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 276 --------------FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp --------------HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred --------------HHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 11112222223334556778999999999999999999999999999887654
No 125
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-40 Score=358.56 Aligned_cols=253 Identities=20% Similarity=0.297 Sum_probs=208.2
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.++|+..+.||+|+||.||+|... +|+.||+|.+.... ......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 127 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY--PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL 127 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc--hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEE
Confidence 467999999999999999999775 68899999986543 334567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC--CCceEEcccCCCccC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD--ELNPHLSDCGLAALT 565 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~--~~~~kl~Dfg~a~~~ 565 (720)
||+++|+|.+++.. ....+++.++..++.||+.||+|||+. +|+||||||+|||++. ++.+||+|||+++..
T Consensus 128 E~~~gg~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~ 201 (387)
T 1kob_A 128 EFLSGGELFDRIAA---EDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKL 201 (387)
T ss_dssp ECCCCCBHHHHTTC---TTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred EcCCCCcHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceec
Confidence 99999999999862 235789999999999999999999999 9999999999999974 578999999999876
Q ss_pred CCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
.... ......||+.|+|||++.+..++.++|||||||++|||++|..||...........+ .+ .
T Consensus 202 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i-------------~~-~ 265 (387)
T 1kob_A 202 NPDE--IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNV-------------KR-C 265 (387)
T ss_dssp CTTS--CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH-------------HH-C
T ss_pred CCCc--ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHH-------------Hh-C
Confidence 5432 223457999999999999999999999999999999999999999764321111100 00 0
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
............+.++.++|.+||+.||++||++.|++++
T Consensus 266 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 266 DWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp CCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred CCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 0011111223456788999999999999999999999975
No 126
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=8.2e-41 Score=356.93 Aligned_cols=250 Identities=23% Similarity=0.346 Sum_probs=193.0
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
..++|+..+.||+|+||.||+|.+. +++.||+|++.... ..+.+.+|+.++++++||||+++++++...+..++|
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 126 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLV 126 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEE
Confidence 4567999999999999999999876 57899999987532 345678899999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC---CCceEEcccCCCc
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD---ELNPHLSDCGLAA 563 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~---~~~~kl~Dfg~a~ 563 (720)
|||+++|+|.+++. ..+.+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++
T Consensus 127 ~e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~ 199 (349)
T 2w4o_A 127 LELVTGGELFDRIV----EKGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSK 199 (349)
T ss_dssp ECCCCSCBHHHHHT----TCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC---
T ss_pred EEeCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCcccc
Confidence 99999999999986 346789999999999999999999999 9999999999999975 8899999999998
Q ss_pred cCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHh
Q 005001 564 LTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAK 643 (720)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (720)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+
T Consensus 200 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---------------~~~~ 262 (349)
T 2w4o_A 200 IVEHQV--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF---------------MFRR 262 (349)
T ss_dssp ---------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH---------------HHHH
T ss_pred ccCccc--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH---------------HHHH
Confidence 654322 22346799999999999999999999999999999999999999976443211 1111
Q ss_pred hccccc--CCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 644 MVDPAL--NGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 644 ~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+..... ........+..+.+|+.+||+.||++||++.|++++
T Consensus 263 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 263 ILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp HHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111111 111223456788999999999999999999999874
No 127
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=2.8e-41 Score=355.79 Aligned_cols=265 Identities=24% Similarity=0.335 Sum_probs=210.4
Q ss_pred HHhcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEee----cC
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE----HG 481 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~ 481 (720)
...++|+..+.||+|+||.||+|.. .+++.||+|++... .......+.+|+.+++.++||||+++++++.. ..
T Consensus 26 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (317)
T 2buj_A 26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH--EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKH 103 (317)
T ss_dssp ETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEE
T ss_pred ECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC--CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCc
Confidence 3457899999999999999999987 57899999988643 34556788999999999999999999999863 34
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCC
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 561 (720)
..++||||+++|+|.+++.........+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~ 180 (317)
T 2buj_A 104 EAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGS 180 (317)
T ss_dssp EEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSS
T ss_pred eeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCc
Confidence 78999999999999999986655667899999999999999999999999 999999999999999999999999999
Q ss_pred CccCCCCCccc--------cccccccccccCccccccCC---CcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHh
Q 005001 562 AALTPNTERQV--------STQMVGAFGYSAPEFALSGI---YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRW 630 (720)
Q Consensus 562 a~~~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~ 630 (720)
+.......... .....||+.|+|||++.+.. ++.++||||||+++|||++|+.||........
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~------ 254 (317)
T 2buj_A 181 MNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD------ 254 (317)
T ss_dssp CEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS------
T ss_pred chhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc------
Confidence 87543211110 12245799999999997654 68899999999999999999999953110000
Q ss_pred hccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHH
Q 005001 631 ATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQ 691 (720)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~ 691 (720)
..............+...+..+.+++.+||+.||++||++.+++++|+++..
T Consensus 255 ---------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 255 ---------SVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp ---------CHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred ---------hhhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 0000111111222234556789999999999999999999999999988743
No 128
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=8e-41 Score=352.34 Aligned_cols=271 Identities=21% Similarity=0.339 Sum_probs=194.1
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.++|+..+.||+|+||.||+|... +|+.||+|++.... .......+.+|+.++++++||||+++++++...+..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS-EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCS-TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc-ccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 357899999999999999999765 68999999986543 2223466889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 488 EYVGNGNLHDMLHFADD--SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
||++ |+|.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 9998 599998864332 234689999999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCccccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHH-Hhh-ccccccHHHHH
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLV-RWA-TPQLHDIDALA 642 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~-~~~-~~~~~~~~~~~ 642 (720)
..... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||...........+ ... .+....+....
T Consensus 159 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 237 (317)
T 2pmi_A 159 GIPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVT 237 (317)
T ss_dssp TSCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGG
T ss_pred CCCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhh
Confidence 43322 22345789999999999874 6899999999999999999999999865533222111 100 00000000000
Q ss_pred hhc--cccc------------CCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 643 KMV--DPAL------------NGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 643 ~~~--~~~~------------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+.. .+.. ....+...+.++.+|+.+||+.||++|||+.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 000 0000 000112345678999999999999999999999875
No 129
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=2.8e-40 Score=352.03 Aligned_cols=267 Identities=26% Similarity=0.398 Sum_probs=213.3
Q ss_pred hhcHHHHhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhc--CCCCCccccceEEee
Q 005001 402 VASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR--LRHPNIVTLAGYCAE 479 (720)
Q Consensus 402 ~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~ 479 (720)
........++|...+.||+|+||.||+|.+ +|+.||+|++... ....+.+|.+++.. ++||||+++++++..
T Consensus 34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~ 107 (342)
T 1b6c_B 34 LLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNK 107 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEEC
T ss_pred eeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch-----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecc
Confidence 334455677899999999999999999988 5899999998543 34567788888776 799999999999987
Q ss_pred cC----eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCcEEecCCCCCEE
Q 005001 480 HG----QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLH--------EVCLPSVVHRNFKSANIL 547 (720)
Q Consensus 480 ~~----~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH--------~~~~~~iiH~Dlkp~NIl 547 (720)
.+ ..++||||+++|+|.++++. ..+++.++..++.|++.||+||| +. +|+||||||+||+
T Consensus 108 ~~~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIl 179 (342)
T 1b6c_B 108 DNGTWTQLWLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNIL 179 (342)
T ss_dssp CCSSCCCEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEE
T ss_pred cCCccceeEEEEeecCCCcHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEE
Confidence 76 78999999999999999972 46899999999999999999999 67 9999999999999
Q ss_pred eCCCCceEEcccCCCccCCCCCcc---ccccccccccccCccccccC------CCcccchhhhHHHHHHHHHhC------
Q 005001 548 LDDELNPHLSDCGLAALTPNTERQ---VSTQMVGAFGYSAPEFALSG------IYTVKSDVYSFGVVMLELLTG------ 612 (720)
Q Consensus 548 l~~~~~~kl~Dfg~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGv~l~elltg------ 612 (720)
++.++.+||+|||++......... ......||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 180 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~ 259 (342)
T 1b6c_B 180 VKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 259 (342)
T ss_dssp ECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTB
T ss_pred ECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCc
Confidence 999999999999999765443322 22345799999999999876 344789999999999999999
Q ss_pred ----CCCCCCCCCcchhhHHHhhccccccHHHHHh-hcccccCCCCC-----hhHHHHHHHHHHHhcCCCCCCCCCHHHH
Q 005001 613 ----RKPLDSSRPRSEQSLVRWATPQLHDIDALAK-MVDPALNGMYP-----AKSLSRFADIIALCVQPEPEFRPPMSEV 682 (720)
Q Consensus 613 ----~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~el 682 (720)
..||........ ....+.+ ..........+ ..++..+.+++.+||+.||++||++.++
T Consensus 260 ~~~~~~p~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i 327 (342)
T 1b6c_B 260 HEDYQLPYYDLVPSDP------------SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRI 327 (342)
T ss_dssp CCCCCCTTTTTSCSSC------------CHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred ccccccCccccCcCcc------------cHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHH
Confidence 778765432211 0111111 11222222222 3567789999999999999999999999
Q ss_pred HHHHHHHHHhhc
Q 005001 683 VQALVRLVQRAS 694 (720)
Q Consensus 683 l~~L~~~~~~~~ 694 (720)
+++|+++.++..
T Consensus 328 ~~~L~~i~~~~~ 339 (342)
T 1b6c_B 328 KKTLSQLSQQEG 339 (342)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHHhc
Confidence 999999977653
No 130
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=8e-41 Score=346.88 Aligned_cols=250 Identities=21% Similarity=0.310 Sum_probs=207.5
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 485 (720)
..++|+..+.||+|+||.||+|.+. +++.||+|++............+.+|+..+..+ +||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 4567899999999999999999876 799999999986655566677888999999998 99999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCC--------------
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE-------------- 551 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~-------------- 551 (720)
||||+++++|.+++.........+++.++..++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 9999999999999986544447799999999999999999999999 99999999999999844
Q ss_pred -----CceEEcccCCCccCCCCCccccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchh
Q 005001 552 -----LNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQ 625 (720)
Q Consensus 552 -----~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~ 625 (720)
..+||+|||.+....... ...||+.|+|||++.+. .++.++|||||||++|||++|..|+.....
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~---- 236 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ---- 236 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH----
T ss_pred ccCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH----
Confidence 479999999998664322 23589999999999876 567899999999999999999887643210
Q ss_pred hHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 626 SLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
...... ......+...+..+.+++.+||+.||++||++.|++++
T Consensus 237 ---------------~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 237 ---------------WHEIRQ-GRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp ---------------HHHHHT-TCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred ---------------HHHHHc-CCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 011111 11122344566789999999999999999999999865
No 131
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=4.7e-41 Score=355.81 Aligned_cols=274 Identities=24% Similarity=0.364 Sum_probs=218.5
Q ss_pred cCCCccceeccCCCcEEEEEEE-----cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEe--ecCe
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEF-----ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCA--EHGQ 482 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~ 482 (720)
++|+..+.||+|+||.||+|.+ .+++.||+|++... .....+.+.+|++++++++||||+++++++. +...
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS 100 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC--CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce
Confidence 5788899999999999999984 36889999999754 3445677899999999999999999999886 4567
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCC
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a 562 (720)
.++||||+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 174 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFLQRH---RARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLA 174 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGC
T ss_pred EEEEEeecCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccc
Confidence 89999999999999999742 24689999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCcc--ccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHh-hccccccHH
Q 005001 563 ALTPNTERQ--VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRW-ATPQLHDID 639 (720)
Q Consensus 563 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~-~~~~~~~~~ 639 (720)
......... ......||+.|+|||++.+..++.++||||||+++|||++|+.||....... ...+ .........
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~---~~~~~~~~~~~~~~ 251 (327)
T 3lxl_A 175 KLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF---LRMMGCERDVPALS 251 (327)
T ss_dssp EECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH---HHHCC----CCHHH
T ss_pred eecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchh---hhhcccccccccHH
Confidence 876543322 2233568889999999999999999999999999999999999986432110 0000 011122223
Q ss_pred HHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhc
Q 005001 640 ALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRAS 694 (720)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 694 (720)
...+.+........+..++..+.+++.+||+.||++||++.|++++|+++.....
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 306 (327)
T 3lxl_A 252 RLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306 (327)
T ss_dssp HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred HHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 3344444444555667788899999999999999999999999999998866543
No 132
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=3.5e-41 Score=372.27 Aligned_cols=251 Identities=23% Similarity=0.327 Sum_probs=200.5
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
.++|+..+.||+|+||.||+|... +|+.||+|++..... .......+.+|+.+++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 467889999999999999999765 689999999975432 333456778899999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHE-VCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~-~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+++..
T Consensus 227 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 227 MEYANGGELFFHLSR----ERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp ECCCSSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EeeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 999999999999873 4578999999999999999999998 7 9999999999999999999999999999764
Q ss_pred CCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
.... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+.
T Consensus 300 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~----------------~~i~ 362 (446)
T 4ejn_A 300 IKDG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF----------------ELIL 362 (446)
T ss_dssp CC------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----------------HHHH
T ss_pred cCCC-cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHH----------------HHHH
Confidence 3322 2234568999999999999999999999999999999999999999764322111 1111
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRP-----PMSEVVQA 685 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~ell~~ 685 (720)
... ..++...+.++.+||.+||+.||++|| +++|++++
T Consensus 363 ~~~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 363 MEE--IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp HCC--CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred hCC--CCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 111 124555677899999999999999999 99999875
No 133
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.2e-40 Score=368.01 Aligned_cols=250 Identities=24% Similarity=0.423 Sum_probs=210.1
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccC-hHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
.++|...+.||+|+||.||+|.+. +|+.||+|++...... ......+.+|+.+++.++||||+++++++...+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 357888999999999999999876 7999999999654321 22356788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||+++|+|.+++. ..+.+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++....
T Consensus 95 ~E~~~gg~L~~~l~----~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~ 167 (476)
T 2y94_A 95 MEYVSGGELFDYIC----KNGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 167 (476)
T ss_dssp EECCSSEEHHHHTT----SSSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EeCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcc
Confidence 99999999999996 356799999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCccccccccccccccCccccccCCC-cccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSGIY-TVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
... .....+||+.|+|||++.+..+ +.++|||||||++|||++|+.||....... ...++.
T Consensus 168 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~----------------~~~~i~ 229 (476)
T 2y94_A 168 DGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT----------------LFKKIC 229 (476)
T ss_dssp TTC--CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHH----------------HHHHHH
T ss_pred ccc--cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHH----------------HHHHHh
Confidence 422 2334579999999999998776 689999999999999999999997643321 111222
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
... ...+...+..+.+|+.+||+.||++|||+.|++++
T Consensus 230 ~~~--~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 230 DGI--FYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp TTC--CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred cCC--cCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 211 12344556788999999999999999999999975
No 134
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=8.4e-41 Score=356.43 Aligned_cols=249 Identities=29% Similarity=0.441 Sum_probs=205.3
Q ss_pred hcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
.+.|+..+.||+|+||.||+|.. .+++.||||++..... .......+.+|+.++++++||||+++++++...+..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 45588899999999999999986 5789999999865432 233456789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||+. |+|.+++.. ....+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++....
T Consensus 133 ~e~~~-g~l~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 205 (348)
T 1u5q_A 133 MEYCL-GSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205 (348)
T ss_dssp EECCS-EEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred EecCC-CCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence 99997 588888753 246799999999999999999999999 99999999999999999999999999997654
Q ss_pred CCCccccccccccccccCccccc---cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHh
Q 005001 567 NTERQVSTQMVGAFGYSAPEFAL---SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAK 643 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (720)
.. ....||+.|+|||++. +..++.++|||||||++|||++|+.||........ +.+
T Consensus 206 ~~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~----------------~~~ 264 (348)
T 1u5q_A 206 PA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA----------------LYH 264 (348)
T ss_dssp SB-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----------------HHH
T ss_pred CC-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH----------------HHH
Confidence 32 2357999999999985 56789999999999999999999999975432111 111
Q ss_pred hcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 644 MVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 644 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+.........+...+..+.+++.+||+.||++||++.+++++
T Consensus 265 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 265 IAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp HHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred HHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 111111112234456778999999999999999999999875
No 135
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.5e-40 Score=356.94 Aligned_cols=273 Identities=23% Similarity=0.332 Sum_probs=210.3
Q ss_pred cchhcHHHHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCC-----CCCcccc
Q 005001 400 YTVASLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-----HPNIVTL 473 (720)
Q Consensus 400 ~~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~l 473 (720)
++........++|.+.+.||+|+||.||+|.+. +++.||+|++... ......+..|+.+++.+. ||||+++
T Consensus 25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~ 101 (360)
T 3llt_A 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI---KKYTRSAKIEADILKKIQNDDINNNNIVKY 101 (360)
T ss_dssp CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---HHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc---hhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence 445556667789999999999999999999874 6889999999642 334556777888888886 9999999
Q ss_pred ceEEeecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC---
Q 005001 474 AGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD--- 550 (720)
Q Consensus 474 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~--- 550 (720)
++++...+..++||||+ +++|.+++... ....+++..+..++.||+.||+|||+. +|+||||||+|||++.
T Consensus 102 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~ 175 (360)
T 3llt_A 102 HGKFMYYDHMCLIFEPL-GPSLYEIITRN--NYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYF 175 (360)
T ss_dssp EEEEEETTEEEEEECCC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTC
T ss_pred cceeeECCeeEEEEcCC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccc
Confidence 99999999999999999 88999999742 234689999999999999999999999 9999999999999975
Q ss_pred ----------------------CCceEEcccCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHH
Q 005001 551 ----------------------ELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLE 608 (720)
Q Consensus 551 ----------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~e 608 (720)
++.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++||
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 251 (360)
T 3llt_A 176 EKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAE 251 (360)
T ss_dssp CEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred cccccchhcccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHH
Confidence 789999999999864432 234579999999999999999999999999999999
Q ss_pred HHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhh-------cc-cccCCCCC--------------------hhHHHH
Q 005001 609 LLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKM-------VD-PALNGMYP--------------------AKSLSR 660 (720)
Q Consensus 609 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~--------------------~~~~~~ 660 (720)
|++|+.||...........+................ .. .......+ ......
T Consensus 252 ll~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (360)
T 3llt_A 252 LYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHEL 331 (360)
T ss_dssp HHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHH
T ss_pred HHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHH
Confidence 999999998654332222222111111110000000 00 00000000 011256
Q ss_pred HHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 661 FADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 661 l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+.+|+.+||+.||++|||++|++++
T Consensus 332 l~~li~~~L~~dP~~Rpta~elL~h 356 (360)
T 3llt_A 332 FCDFLYSILQIDPTLRPSPAELLKH 356 (360)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHHhcCChhhCCCHHHHhcC
Confidence 7899999999999999999999864
No 136
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2.4e-40 Score=344.90 Aligned_cols=269 Identities=19% Similarity=0.262 Sum_probs=208.7
Q ss_pred HhcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEE-eecCeEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC-AEHGQRLL 485 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~l 485 (720)
..++|+..+.||+|+||.||+|.+ .+++.||+|++..... ...+.+|+.+++.++|++++..++++ ...+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc----chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEE
Confidence 457899999999999999999986 5788999998654322 23477889999999888877766655 66778899
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEe---CCCCceEEcccCCC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL---DDELNPHLSDCGLA 562 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll---~~~~~~kl~Dfg~a 562 (720)
||||+ +++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 83 v~e~~-~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a 155 (296)
T 4hgt_A 83 VMELL-GPSLEDLFNF---CSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp EEECC-CCBHHHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEcc-CCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccc
Confidence 99999 8899999873 245799999999999999999999999 99999999999999 78899999999999
Q ss_pred ccCCCCCcc------ccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccc
Q 005001 563 ALTPNTERQ------VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLH 636 (720)
Q Consensus 563 ~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 636 (720)
+........ ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...............
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~----- 230 (296)
T 4hgt_A 156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERI----- 230 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHH-----
T ss_pred eeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhh-----
Confidence 866443221 123457999999999999999999999999999999999999999875543222111100
Q ss_pred cHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhcccc
Q 005001 637 DIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVK 697 (720)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~~~~ 697 (720)
........ ........+..+.+++.+||+.||++||++.++++.|+++.++.....
T Consensus 231 ----~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~~ 286 (296)
T 4hgt_A 231 ----SEKKMSTP-IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSY 286 (296)
T ss_dssp ----HHHHHHSC-HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCCT
T ss_pred ----hcccccch-hhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCCc
Confidence 00000000 000112345678999999999999999999999999999998876543
No 137
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.1e-40 Score=382.00 Aligned_cols=252 Identities=27% Similarity=0.387 Sum_probs=208.8
Q ss_pred ceeccCCCcEEEEEEEc---CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecCC
Q 005001 416 FLIGEGSLGRVYRAEFA---NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 492 (720)
+.||+|+||.||+|.+. .++.||||+++.........+.+.+|++++++++||||+++++++. .+..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence 47999999999999653 4678999999876656666788999999999999999999999986 4568999999999
Q ss_pred CCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCcc-
Q 005001 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ- 571 (720)
Q Consensus 493 gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~- 571 (720)
|+|.++++ ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 454 g~L~~~l~----~~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 454 GPLNKYLQ----QNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp EEHHHHHH----HCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCHHHHHh----hCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 99999996 346799999999999999999999999 9999999999999999999999999999876543322
Q ss_pred -ccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhccccc
Q 005001 572 -VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPAL 649 (720)
Q Consensus 572 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (720)
......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... +...+....
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-----------------~~~~i~~~~ 589 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-----------------VTAMLEKGE 589 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-----------------HHHHHHTTC
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-----------------HHHHHHcCC
Confidence 2233457889999999999999999999999999999998 999997654321 112222233
Q ss_pred CCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHh
Q 005001 650 NGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQR 692 (720)
Q Consensus 650 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~ 692 (720)
....+..++.++.++|.+||+.||++||++.+|++.|+++...
T Consensus 590 ~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 632 (635)
T 4fl3_A 590 RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 632 (635)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 3445667788999999999999999999999999999988654
No 138
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=8.8e-41 Score=351.10 Aligned_cols=262 Identities=23% Similarity=0.333 Sum_probs=201.7
Q ss_pred HhcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCe---
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ--- 482 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~--- 482 (720)
..++|+..+.||+|+||.||+|.+ .+++.||+|++..... .......+.+|+.++++++||||+++++++...+.
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 89 (311)
T 3ork_A 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 89 (311)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence 346799999999999999999986 5789999999976543 33445678999999999999999999999876543
Q ss_pred -EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCC
Q 005001 483 -RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (720)
Q Consensus 483 -~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 561 (720)
.++||||+++++|.++++. .+.+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 162 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGI 162 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSC
T ss_pred ccEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccC
Confidence 4999999999999999973 35789999999999999999999999 999999999999999999999999999
Q ss_pred CccCCCCCcc--ccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHH
Q 005001 562 AALTPNTERQ--VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDID 639 (720)
Q Consensus 562 a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 639 (720)
+......... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..........
T Consensus 163 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~------------- 229 (311)
T 3ork_A 163 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY------------- 229 (311)
T ss_dssp C------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH-------------
T ss_pred cccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH-------------
Confidence 9865443222 2234569999999999999999999999999999999999999997644321111
Q ss_pred HHHhhcccccC--CCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHH-HHHHHHHHh
Q 005001 640 ALAKMVDPALN--GMYPAKSLSRFADIIALCVQPEPEFRPPMSEVV-QALVRLVQR 692 (720)
Q Consensus 640 ~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell-~~L~~~~~~ 692 (720)
........ .......+.++.+++.+||+.||++||++.+++ +.+.++...
T Consensus 230 ---~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~ 282 (311)
T 3ork_A 230 ---QHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNG 282 (311)
T ss_dssp ---HHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTT
T ss_pred ---HHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcC
Confidence 00000000 001123556789999999999999999777665 455555443
No 139
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=7.4e-41 Score=359.40 Aligned_cols=247 Identities=23% Similarity=0.328 Sum_probs=196.9
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccC-hHHHHHHHHHHHH-hhcCCCCCccccceEEeecCeEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSN-MSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
.++|+..+.||+|+||.||+|+.. +++.||+|++...... ......+.+|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 357889999999999999999876 5889999999765442 2334556677766 567899999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
||||+++|+|.++++. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.+|.+||+|||+++..
T Consensus 117 v~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~ 189 (373)
T 2r5t_A 117 VLDYINGGELFYHLQR----ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 189 (373)
T ss_dssp EEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred EEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence 9999999999999973 35789999999999999999999999 9999999999999999999999999999753
Q ss_pred CCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
.... ......+||+.|+|||++.+..++.++|||||||++|||++|..||...... +...++.
T Consensus 190 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~----------------~~~~~i~ 252 (373)
T 2r5t_A 190 IEHN-STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA----------------EMYDNIL 252 (373)
T ss_dssp BCCC-CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH----------------HHHHHHH
T ss_pred ccCC-CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH----------------HHHHHHH
Confidence 3222 2234568999999999999999999999999999999999999999754321 1111222
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHH
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSE 681 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 681 (720)
... ..++...+..+.+++.+||+.||++||++.+
T Consensus 253 ~~~--~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 253 NKP--LQLKPNITNSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp HSC--CCCCSSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred hcc--cCCCCCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence 221 1234556678899999999999999999853
No 140
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.4e-40 Score=345.04 Aligned_cols=255 Identities=26% Similarity=0.348 Sum_probs=202.8
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.++|...+.||+|+||.||+|... ++..||+|++.... .......+.+|++++++++||||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 99 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR-SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM 99 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG-CCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccc-cchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence 457888999999999999999775 68899999987554 2334577889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEe---CCCCceEEcccCCCcc
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL---DDELNPHLSDCGLAAL 564 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll---~~~~~~kl~Dfg~a~~ 564 (720)
||+++|+|.+++.........+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++..
T Consensus 100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~ 176 (285)
T 3is5_A 100 ETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL 176 (285)
T ss_dssp CCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC
T ss_pred EeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeeccee
Confidence 99999999999875544567899999999999999999999999 99999999999999 4568899999999976
Q ss_pred CCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhh
Q 005001 565 TPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKM 644 (720)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (720)
..... ......||+.|+|||++. ..++.++||||||+++|||++|+.||...............
T Consensus 177 ~~~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~------------- 240 (285)
T 3is5_A 177 FKSDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYK------------- 240 (285)
T ss_dssp ------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-------------
T ss_pred cCCcc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccC-------------
Confidence 54322 234457999999999875 56899999999999999999999999764422111111111
Q ss_pred cccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 645 VDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 645 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
..... ......+..+.+++.+||+.||++||++.|++++
T Consensus 241 -~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 241 -EPNYA-VECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp -CCCCC-C--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred -Ccccc-cccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11110 0111245678899999999999999999999864
No 141
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3e-40 Score=365.39 Aligned_cols=265 Identities=21% Similarity=0.272 Sum_probs=201.9
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec------C
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH------G 481 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 481 (720)
.++|+..+.||+|+||.||+|.+. +++.||||++............+.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 578999999999999999999765 689999999987665666678899999999999999999999998654 4
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCC
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 561 (720)
..|+||||+++ +|.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 141 ~~~lv~E~~~~-~l~~~~~------~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp EEEEEEECCSE-EHHHHHT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred eEEEEEeCCCC-CHHHHHh------hcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 57999999976 5777664 3589999999999999999999999 999999999999999999999999999
Q ss_pred CccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHH-Hh-hcccc---c
Q 005001 562 AALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLV-RW-ATPQL---H 636 (720)
Q Consensus 562 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~-~~-~~~~~---~ 636 (720)
++..... ......+||+.|+|||++.+..|+.++|||||||++|||++|+.||.+.........+ .. ..+.. .
T Consensus 211 a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~ 288 (464)
T 3ttj_A 211 ARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 288 (464)
T ss_dssp C-----C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHT
T ss_pred eeecCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 9865432 2234568999999999999999999999999999999999999999875532221111 10 00000 0
Q ss_pred c-HHHHHhhcccccC-CC------CC-----------hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 637 D-IDALAKMVDPALN-GM------YP-----------AKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 637 ~-~~~~~~~~~~~~~-~~------~~-----------~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
. ............. .. ++ ...+.++.+|+.+||+.||++|||++|++++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 289 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp TSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 0011111110000 00 00 1125678999999999999999999999976
No 142
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=7.7e-41 Score=347.67 Aligned_cols=258 Identities=25% Similarity=0.376 Sum_probs=197.2
Q ss_pred HhcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
..++|+..+.||+|+||.||+|.+ .+|+.||+|++............+.++...++.++||||+++++++...+..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 356789999999999999999987 4789999999976544444445555666668888999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||+++ +|.++++........+++..+..++.|++.||+|||+.. +|+||||||+||+++.++.+||+|||++....
T Consensus 85 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 85 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp EECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred Eehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 999975 998888765555678999999999999999999999853 89999999999999999999999999997654
Q ss_pred CCCccccccccccccccCcccc----ccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 567 NTERQVSTQMVGAFGYSAPEFA----LSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||....... ....
T Consensus 162 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---------------~~~~ 224 (290)
T 3fme_A 162 DDV--AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF---------------QQLK 224 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH---------------HHHH
T ss_pred ccc--cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchH---------------HHHH
Confidence 332 22334799999999996 56678999999999999999999999997543211 1111
Q ss_pred hhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 643 KMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
...........+...+..+.+++.+||+.||++|||+.|++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 225 QVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp HHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 1222222222233456789999999999999999999999985
No 143
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.7e-40 Score=370.97 Aligned_cols=259 Identities=22% Similarity=0.358 Sum_probs=213.0
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccC-hHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
.++|...+.||+|+||.||+|++. +|+.||+|++...... ......+.+|+.++++++||||+++++++...+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 367888999999999999999875 6999999999754322 22356788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||++||+|.+++.........+++..+..++.||+.||+|||+. +|+||||||+|||++.+|.+||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 999999999999975444456799999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
.... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .....+..
T Consensus 341 ~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~------------~~~~~i~~ 407 (543)
T 3c4z_A 341 AGQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK------------ELKQRVLE 407 (543)
T ss_dssp TTCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHH------------HHHHHHHH
T ss_pred CCCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHH------------HHHHHHhh
Confidence 4322 2334589999999999999999999999999999999999999998654321111 11111111
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHH
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRPPM-----SEVVQA 685 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~ell~~ 685 (720)
. ...++...+..+.++|.+||+.||++||++ ++++++
T Consensus 408 ~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 408 Q--AVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp C--CCCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred c--ccCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 1 123455677889999999999999999975 666653
No 144
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.3e-40 Score=343.21 Aligned_cols=248 Identities=25% Similarity=0.390 Sum_probs=185.0
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccC-hHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
++|+..+.||+|+||.||+|.+. +++.||+|++...... ......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 57899999999999999999764 6899999999765432 233567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+ +++|.+++. ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 93 e~~-~~~l~~~~~----~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 164 (275)
T 2eue_A 93 EYA-GNELFDYIV----QRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHH----TSSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-----
T ss_pred hhc-CCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccC
Confidence 999 668888876 246799999999999999999999999 999999999999999999999999999976543
Q ss_pred CCccccccccccccccCccccccCCC-cccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIY-TVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
.. ......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||......... ..+..
T Consensus 165 ~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~----------------~~~~~ 226 (275)
T 2eue_A 165 GN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLF----------------KNISN 226 (275)
T ss_dssp ------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----------------HHHHH
T ss_pred cc--cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHH----------------HHHHh
Confidence 22 2234579999999999988776 78999999999999999999999754321111 11111
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
. ....+...+..+.+++.+||+.||++|||+.|++++
T Consensus 227 ~--~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 227 G--VYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp T--CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred C--CCCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 1 112345566788999999999999999999999875
No 145
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=2.9e-40 Score=340.66 Aligned_cols=254 Identities=24% Similarity=0.334 Sum_probs=207.8
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.++|+..+.||+|+||.||+|.+. +++.||+|++..... ......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC-TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc-hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 467889999999999999999876 689999999865432 334577889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 85 e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 157 (276)
T 2yex_A 85 EYCSGGELFDRIE----PDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (276)
T ss_dssp ECCTTEEGGGGSB----TTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred EecCCCcHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCC
Confidence 9999999999886 346789999999999999999999999 999999999999999999999999999976533
Q ss_pred CCc-cccccccccccccCccccccCCC-cccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 568 TER-QVSTQMVGAFGYSAPEFALSGIY-TVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 568 ~~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
... .......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||......... .. ...
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~--------------~~~ 222 (276)
T 2yex_A 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YS--------------DWK 222 (276)
T ss_dssp TTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHH-HH--------------HHH
T ss_pred CcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHH-HH--------------Hhh
Confidence 221 12334579999999999988775 78999999999999999999999765432111 11 111
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
............+..+.+++.+||+.||++||++.|++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 223 EKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp TTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred hcccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 1111111123456778899999999999999999999864
No 146
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.7e-42 Score=359.88 Aligned_cols=259 Identities=26% Similarity=0.391 Sum_probs=190.7
Q ss_pred hcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhc--CCCCCccccceEEeecC----e
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR--LRHPNIVTLAGYCAEHG----Q 482 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~ 482 (720)
.++|...+.||+|+||.||+|.+. ++.||+|++... ....+.+|.+++.. ++||||+++++++...+ .
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 75 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 75 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T-----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc-----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccce
Confidence 367999999999999999999875 889999998642 34566777887776 79999999999998876 7
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCcEEecCCCCCEEeCCCCce
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLH--------EVCLPSVVHRNFKSANILLDDELNP 554 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH--------~~~~~~iiH~Dlkp~NIll~~~~~~ 554 (720)
.++||||+++|+|.++++. ..+++..+..++.|++.||+||| +. +|+||||||+|||++.++.+
T Consensus 76 ~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~ 147 (303)
T 3gxj_A 76 LWLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTC 147 (303)
T ss_dssp EEEEEECCTTCCHHHHHHH-----CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC
T ss_pred eEEEEeccCCCCHHHHHhc-----cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCE
Confidence 8999999999999999962 46788889999999999999999 77 99999999999999999999
Q ss_pred EEcccCCCccCCCCCccc---cccccccccccCccccccC------CCcccchhhhHHHHHHHHHhC----------CCC
Q 005001 555 HLSDCGLAALTPNTERQV---STQMVGAFGYSAPEFALSG------IYTVKSDVYSFGVVMLELLTG----------RKP 615 (720)
Q Consensus 555 kl~Dfg~a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGv~l~elltg----------~~p 615 (720)
||+|||++.......... .....||+.|+|||++.+. .++.++|||||||++|||++| ..|
T Consensus 148 kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p 227 (303)
T 3gxj_A 148 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 227 (303)
T ss_dssp -BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCT
T ss_pred EEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecc
Confidence 999999997654433221 2334799999999999876 455789999999999999999 666
Q ss_pred CCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCCCh-----hHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHH
Q 005001 616 LDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPA-----KSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLV 690 (720)
Q Consensus 616 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~ 690 (720)
|....+.... . ................+. ..+..+.+++.+||+.||++|||+.++++.|+++.
T Consensus 228 ~~~~~~~~~~---------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~ 296 (303)
T 3gxj_A 228 YYDLVPSDPS---------V--EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp TTTTCC-CCC---------C--C-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-C
T ss_pred ccccCCCCcc---------H--HHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhh
Confidence 6543221100 0 011111122222222332 56678999999999999999999999999998875
Q ss_pred Hh
Q 005001 691 QR 692 (720)
Q Consensus 691 ~~ 692 (720)
++
T Consensus 297 ~~ 298 (303)
T 3gxj_A 297 QQ 298 (303)
T ss_dssp CC
T ss_pred hh
Confidence 43
No 147
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.5e-40 Score=343.67 Aligned_cols=250 Identities=27% Similarity=0.421 Sum_probs=205.9
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccC-hHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
..++|++.+.||+|+||.||+|.+. +++.||+|++...... ......+.+|+.++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 3467889999999999999999775 5778999998654322 2235678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 87 v~e~~~~~~l~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~ 159 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHA 159 (279)
T ss_dssp EECCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred EEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccC
Confidence 9999999999999873 35689999999999999999999999 9999999999999999999999999998654
Q ss_pred CCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
... ......||+.|+|||.+.+..++.++||||||+++|||++|..||.......... .+.
T Consensus 160 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~----------------~~~ 220 (279)
T 3fdn_A 160 PSS---RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK----------------RIS 220 (279)
T ss_dssp -----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH----------------HHH
T ss_pred Ccc---cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHH----------------HHH
Confidence 332 2234579999999999999999999999999999999999999997543221111 111
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
......+...+..+.+++.+||+.||++||+++|++++
T Consensus 221 --~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 221 --RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp --HTCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred --hCCCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 11223445566788999999999999999999999987
No 148
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=2.7e-40 Score=350.03 Aligned_cols=269 Identities=24% Similarity=0.361 Sum_probs=213.9
Q ss_pred HhcCCCccceeccCCCcEEEEEEE------cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecC
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEF------ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG 481 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 481 (720)
..++|...+.||+|+||.||+|.+ .+++.||+|++.... .......+.+|+.++++++||||+++++++...+
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 106 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 106 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc-chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence 346799999999999999999973 357789999996433 4455678899999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC---CCceE
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDS---SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD---ELNPH 555 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~---~~~~k 555 (720)
..++||||+++++|.+++...... ...+++.++..++.|++.||.|||+. +|+||||||+||+++. +..+|
T Consensus 107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~k 183 (327)
T 2yfx_A 107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAK 183 (327)
T ss_dssp SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEE
Confidence 999999999999999999754321 24589999999999999999999999 9999999999999984 44699
Q ss_pred EcccCCCccCCCCCc-cccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhcc
Q 005001 556 LSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATP 633 (720)
Q Consensus 556 l~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~ 633 (720)
|+|||++........ .......||+.|+|||.+.+..++.++||||||+++|||++ |..||.......
T Consensus 184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---------- 253 (327)
T 2yfx_A 184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE---------- 253 (327)
T ss_dssp ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH----------
T ss_pred ECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHH----------
Confidence 999999874432221 12233568999999999999999999999999999999998 999997543211
Q ss_pred ccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhcccc
Q 005001 634 QLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVK 697 (720)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~~~~ 697 (720)
..+.+........+..++..+.+++.+||+.||++||++.+++++|+.+........
T Consensus 254 -------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~~~~ 310 (327)
T 2yfx_A 254 -------VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVIN 310 (327)
T ss_dssp -------HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHHHHT
T ss_pred -------HHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHHHhc
Confidence 111111111223345567789999999999999999999999999999877665443
No 149
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=3.5e-40 Score=342.83 Aligned_cols=250 Identities=22% Similarity=0.371 Sum_probs=204.1
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEee----cCeEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE----HGQRL 484 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~ 484 (720)
..|...+.||+|+||.||+|.+. ++..||+|++............+.+|+.++++++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 34777889999999999999774 67889999998776677778889999999999999999999998865 35689
Q ss_pred EEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEEecCCCCCEEeC-CCCceEEcccCC
Q 005001 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS--VVHRNFKSANILLD-DELNPHLSDCGL 561 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~--iiH~Dlkp~NIll~-~~~~~kl~Dfg~ 561 (720)
+||||+++++|.++++. ...+++..+..++.|++.||+|||+. + |+||||||+||+++ .++.+||+|||+
T Consensus 106 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred EEEEecCCCCHHHHHHH----ccCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 99999999999999973 36789999999999999999999998 7 99999999999997 789999999999
Q ss_pred CccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHH
Q 005001 562 AALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDAL 641 (720)
Q Consensus 562 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (720)
+...... ......||+.|+|||++.+ .++.++||||||+++|+|++|+.||......... .
T Consensus 179 ~~~~~~~---~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~---------------~ 239 (290)
T 1t4h_A 179 ATLKRAS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI---------------Y 239 (290)
T ss_dssp GGGCCTT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHH---------------H
T ss_pred ccccccc---ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHH---------------H
Confidence 9765432 2234579999999998764 5899999999999999999999999764332111 1
Q ss_pred HhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 642 AKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
............+...+..+.+++.+||+.||++||++.|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 240 RRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp HHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 11111111111223344678999999999999999999999864
No 150
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=359.21 Aligned_cols=278 Identities=21% Similarity=0.296 Sum_probs=215.7
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecC--eEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG--QRLL 485 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~l 485 (720)
.++|.+.+.||+|+||.||+|.+. +|+.||+|++..... ......+.+|++++++++||||+++++++...+ ..++
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~l 86 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEE
Confidence 467899999999999999999876 489999999975432 233567789999999999999999999988765 7799
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEe----CCCCceEEcccCC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL----DDELNPHLSDCGL 561 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll----~~~~~~kl~Dfg~ 561 (720)
||||+++|+|.++++... ....+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+
T Consensus 87 v~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~ 162 (396)
T 4eut_A 87 IMEFCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (396)
T ss_dssp EECCCTTEEHHHHTTSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred EEecCCCCCHHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence 999999999999997432 223499999999999999999999999 99999999999999 7788899999999
Q ss_pred CccCCCCCccccccccccccccCcccccc--------CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcch-hhHH-Hhh
Q 005001 562 AALTPNTERQVSTQMVGAFGYSAPEFALS--------GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSE-QSLV-RWA 631 (720)
Q Consensus 562 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~-~~~~-~~~ 631 (720)
++...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ .... ...
T Consensus 163 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~ 240 (396)
T 4eut_A 163 ARELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240 (396)
T ss_dssp CEECCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHH
T ss_pred ceEccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHh
Confidence 98764432 2234679999999999875 5678899999999999999999999975433211 1111 100
Q ss_pred ccc-cccHHHHHhh------c--ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 632 TPQ-LHDIDALAKM------V--DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 632 ~~~-~~~~~~~~~~------~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
... ........+. . ........+...+..+.+++.+||+.||++||+++++++.+.+++++.
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~ 311 (396)
T 4eut_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRM 311 (396)
T ss_dssp HSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCE
T ss_pred cCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhce
Confidence 000 0000000000 0 001112234667888999999999999999999999999999998864
No 151
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=4.4e-40 Score=343.00 Aligned_cols=267 Identities=19% Similarity=0.267 Sum_probs=211.2
Q ss_pred hcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEE-eecCeEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC-AEHGQRLLV 486 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lV 486 (720)
.++|+..+.||+|+||.||+|.+ .+++.||+|++..... ...+.+|+.+++.++|++++..+.++ ...+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEE
Confidence 46799999999999999999987 5789999999865432 23578899999999988877666655 566788999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEe---CCCCceEEcccCCCc
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL---DDELNPHLSDCGLAA 563 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll---~~~~~~kl~Dfg~a~ 563 (720)
|||+ +++|.+++.. ....+++.++..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++.
T Consensus 84 ~e~~-~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~ 156 (296)
T 3uzp_A 84 MELL-GPSLEDLFNF---CSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156 (296)
T ss_dssp EECC-CCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEec-CCCHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcc
Confidence 9999 8899999973 245799999999999999999999999 99999999999999 488899999999998
Q ss_pred cCCCCCcc------ccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcccccc
Q 005001 564 LTPNTERQ------VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHD 637 (720)
Q Consensus 564 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 637 (720)
........ ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...............
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~------ 230 (296)
T 3uzp_A 157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERI------ 230 (296)
T ss_dssp ECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHH------
T ss_pred cccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhh------
Confidence 66543321 123457999999999999999999999999999999999999999865433221111100
Q ss_pred HHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhccc
Q 005001 638 IDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVV 696 (720)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~~~ 696 (720)
........ ....+...+..+.+++.+||+.||++||++.++++.|+++.++....
T Consensus 231 ---~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~ 285 (296)
T 3uzp_A 231 ---SEKKMSTP-IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS 285 (296)
T ss_dssp ---HHHHHHSC-HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred ---cccccCCc-hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCc
Confidence 00000000 00011234567899999999999999999999999999998877544
No 152
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1e-40 Score=352.68 Aligned_cols=249 Identities=24% Similarity=0.340 Sum_probs=181.9
Q ss_pred cceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCC-CCCccccceEEeecCeEEEEEEecCC
Q 005001 415 EFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHGQRLLVYEYVGN 492 (720)
Q Consensus 415 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~~~ 492 (720)
.+.||+|+||.||+|.+. +++.||+|++... ....+.+|+.+++.+. ||||+++++++.+.+..++||||+++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 90 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCC
Confidence 468999999999999875 6899999998542 3566778999999996 99999999999999999999999999
Q ss_pred CCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCC---ceEEcccCCCccCCCCC
Q 005001 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL---NPHLSDCGLAALTPNTE 569 (720)
Q Consensus 493 gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~---~~kl~Dfg~a~~~~~~~ 569 (720)
|+|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++......
T Consensus 91 ~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 163 (325)
T 3kn6_A 91 GELFERIKK----KKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN 163 (325)
T ss_dssp CBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC--
T ss_pred CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC
Confidence 999999973 46799999999999999999999999 999999999999997765 89999999998654432
Q ss_pred ccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccccc
Q 005001 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPAL 649 (720)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (720)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ....+...++.....
T Consensus 164 -~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~---------~~~~~~~~~i~~~~~ 233 (325)
T 3kn6_A 164 -QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTC---------TSAVEIMKKIKKGDF 233 (325)
T ss_dssp ---------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------C---------CCHHHHHHHHTTTCC
T ss_pred -CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccccc---------ccHHHHHHHHHcCCC
Confidence 2233457899999999999999999999999999999999999999764432110 001112222222221
Q ss_pred CCCC--ChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 650 NGMY--PAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 650 ~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.... ....+.++.+|+.+||+.||++||+++|++++
T Consensus 234 ~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 234 SFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp CCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred CCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 1111 12356789999999999999999999998854
No 153
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.5e-40 Score=372.15 Aligned_cols=257 Identities=24% Similarity=0.378 Sum_probs=212.2
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
..++|+..+.||+|+||.||+|.+. +|+.||+|++..... .......+.+|+.+++.++||||+++++++.+.+..++
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 3567999999999999999999875 699999999965432 22335668899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
||||+++|+|.+++... ....+++..+..++.||+.||+|||+. +|+||||||+|||++.+|.+||+|||++...
T Consensus 262 VmEy~~gg~L~~~l~~~--~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~ 336 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHM--GQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHV 336 (576)
T ss_dssp EECCCCSCBHHHHHHSS--SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEcCCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceec
Confidence 99999999999998732 234599999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
.... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .+.+.+
T Consensus 337 ~~~~--~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~-------------~i~~~i 401 (576)
T 2acx_A 337 PEGQ--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE-------------EVERLV 401 (576)
T ss_dssp CTTC--CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHH-------------HHHHHH
T ss_pred ccCc--cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHH-------------HHHHHh
Confidence 5432 2234589999999999999999999999999999999999999998654321111 111111
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRP-----PMSEVVQA 685 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~ell~~ 685 (720)
. .....++...+.++.+||.+||+.||++|| +++|++++
T Consensus 402 ~-~~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 402 K-EVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp H-HCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred h-cccccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 1 112234556677899999999999999999 78888865
No 154
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.8e-40 Score=356.29 Aligned_cols=267 Identities=21% Similarity=0.374 Sum_probs=210.2
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.++|+..+.||+|+||.||+|.+. +++.||+|++.... .......+.+|+.++++++||||+++++++...+..++||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 110 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 110 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc-CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEE
Confidence 457889999999999999999876 68899999987543 4455678899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++++|.++++. ...+++..+..++.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||++.....
T Consensus 111 e~~~~~~L~~~l~~----~~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 184 (360)
T 3eqc_A 111 EHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184 (360)
T ss_dssp CCCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred ECCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence 99999999999973 356899999999999999999999842 899999999999999999999999999864421
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHh-----------------
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRW----------------- 630 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~----------------- 630 (720)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||..............
T Consensus 185 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (360)
T 3eqc_A 185 ---SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG 261 (360)
T ss_dssp ---HC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------
T ss_pred ---ccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCC
Confidence 122345799999999999999999999999999999999999999976543221111100
Q ss_pred ---------hccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 631 ---------ATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 631 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
..+....................+...+.++.+|+.+||+.||++|||++|++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 262 RPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp ------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 0000011111222222222222223456789999999999999999999999987
No 155
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=9.6e-41 Score=354.30 Aligned_cols=246 Identities=22% Similarity=0.336 Sum_probs=206.1
Q ss_pred HHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccCh------HHHHHHHHHHHHhhcCCCCCccccceEEee
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL------QEEDNFLEAVSNMSRLRHPNIVTLAGYCAE 479 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 479 (720)
...++|+..+.||+|+||.||+|.+. +++.||+|++....... .....+.+|+.++++++||||+++++++.+
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~ 100 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN 100 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence 34578999999999999999999764 68899999997554221 123456789999999999999999999999
Q ss_pred cCeEEEEEEecCCC-CHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcc
Q 005001 480 HGQRLLVYEYVGNG-NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSD 558 (720)
Q Consensus 480 ~~~~~lV~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~D 558 (720)
.+..++||||+.+| +|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 101 ~~~~~lv~e~~~~g~~l~~~~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~D 173 (335)
T 3dls_A 101 QGFFQLVMEKHGSGLDLFAFID----RHPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLID 173 (335)
T ss_dssp SSEEEEEEECCTTSCBHHHHHH----TCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECC
T ss_pred CCEEEEEEEeCCCCccHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEee
Confidence 99999999999777 9999987 346799999999999999999999999 999999999999999999999999
Q ss_pred cCCCccCCCCCccccccccccccccCccccccCCC-cccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcccccc
Q 005001 559 CGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIY-TVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHD 637 (720)
Q Consensus 559 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 637 (720)
||++....... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||......
T Consensus 174 fg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------------- 236 (335)
T 3dls_A 174 FGSAAYLERGK--LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET--------------- 236 (335)
T ss_dssp CTTCEECCTTC--CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG---------------
T ss_pred cccceECCCCC--ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH---------------
Confidence 99998765432 2234679999999999998887 88999999999999999999999642110
Q ss_pred HHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 638 IDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
... ....+...+.++.+|+.+||+.||++||++.+++++
T Consensus 237 -------~~~--~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 -------VEA--AIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -------TTT--CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -------Hhh--ccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 111233356778999999999999999999999986
No 156
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.3e-40 Score=351.20 Aligned_cols=269 Identities=22% Similarity=0.345 Sum_probs=206.7
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.++|+..+.||+|+||.||+|.+. +|+.||+|++............+.+|+.++++++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 357889999999999999999876 5899999998766555566677889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 104 e~~~~~~l~~~~~----~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 104 EFVDHTILDDLEL----FPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176 (331)
T ss_dssp ECCSEEHHHHHHH----STTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred ecCCcchHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence 9999999988765 346799999999999999999999999 999999999999999999999999999976543
Q ss_pred CCccccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhh-ccccccHHH-HHh-
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWA-TPQLHDIDA-LAK- 643 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~-~~~~~~~~~-~~~- 643 (720)
... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||...........+... ......... ..+
T Consensus 177 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (331)
T 4aaa_A 177 PGE-VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKN 255 (331)
T ss_dssp --------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHC
T ss_pred Ccc-ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhc
Confidence 322 22345799999999999875 6899999999999999999999999875533222111100 000000000 000
Q ss_pred -----hcccccCCCC-----ChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 644 -----MVDPALNGMY-----PAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 644 -----~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
...+...... ....+..+.+|+.+||+.||++||++.|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 256 PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp GGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000111111 12346789999999999999999999999976
No 157
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.4e-40 Score=343.56 Aligned_cols=254 Identities=27% Similarity=0.434 Sum_probs=204.2
Q ss_pred hcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec-CeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH-GQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-~~~~lV~ 487 (720)
.++|+..+.||+|+||.||+|+.. |+.||+|.+.... ..+.+.+|+.++++++||||+++++++... +..++||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 94 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence 467889999999999999999875 8899999997542 456788999999999999999999987554 5789999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 95 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 169 (278)
T 1byg_A 95 EYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 169 (278)
T ss_dssp CCCTTEEHHHHHHHHH--HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred ecCCCCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccc
Confidence 9999999999997421 23478999999999999999999999 999999999999999999999999999875433
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
.. ....+++.|+|||.+.+..++.++||||||+++|||++ |+.||........ ...+.
T Consensus 170 ~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~-----------------~~~~~ 228 (278)
T 1byg_A 170 TQ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV-----------------VPRVE 228 (278)
T ss_dssp ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGH-----------------HHHHT
T ss_pred cc----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH-----------------HHHHh
Confidence 21 23457889999999999999999999999999999998 9999975432211 11111
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
.......+...+..+.+++.+||+.||++||++.++++.|+++....
T Consensus 229 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 229 KGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred cCCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 12223345566788999999999999999999999999999986643
No 158
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.2e-40 Score=354.71 Aligned_cols=264 Identities=20% Similarity=0.290 Sum_probs=202.8
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecC------
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG------ 481 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 481 (720)
.++|+..+.||+|+||.||+|.+. +|+.||||++............+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 467999999999999999999874 6999999999766555566778899999999999999999999987653
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCC
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 561 (720)
..++||||+ +++|.++++. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeec
Confidence 469999999 7899999872 5789999999999999999999999 999999999999999999999999999
Q ss_pred CccCCCCCccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHh--hccc----
Q 005001 562 AALTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRW--ATPQ---- 634 (720)
Q Consensus 562 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~--~~~~---- 634 (720)
++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.........+.. ..+.
T Consensus 175 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~ 250 (367)
T 1cm8_A 175 ARQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFV 250 (367)
T ss_dssp CEECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred ccccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 9875432 234678999999999987 6799999999999999999999999987553322211110 0000
Q ss_pred --ccc--HHHHHhhcccccC---CCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 635 --LHD--IDALAKMVDPALN---GMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 635 --~~~--~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
... .....+....... .......+..+.+|+.+||+.||++|||+.|++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 251 QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 000 0001111110000 01123456778999999999999999999999986
No 159
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=3.7e-40 Score=345.83 Aligned_cols=271 Identities=24% Similarity=0.310 Sum_probs=199.7
Q ss_pred HHhcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccC---hHHHHHHHHHHHHhhcC---CCCCccccceEEee
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALS---LQEEDNFLEAVSNMSRL---RHPNIVTLAGYCAE 479 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~ 479 (720)
...++|+..+.||+|+||.||+|.+ .+++.||+|++...... ......+.+|+.+++++ +||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 3467899999999999999999986 46899999998643321 11123455666665555 59999999999977
Q ss_pred cC-----eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCce
Q 005001 480 HG-----QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNP 554 (720)
Q Consensus 480 ~~-----~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~ 554 (720)
.. ..++||||+. ++|.+++... ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~ 159 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKA--PPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTV 159 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTC--CTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCE
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCE
Confidence 55 5799999997 5999998732 234499999999999999999999999 99999999999999999999
Q ss_pred EEcccCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHH-Hhh-c
Q 005001 555 HLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLV-RWA-T 632 (720)
Q Consensus 555 kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~-~~~-~ 632 (720)
||+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+ ... .
T Consensus 160 kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~ 237 (308)
T 3g33_A 160 KLADFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGL 237 (308)
T ss_dssp EECSCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred EEeeCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 999999998664332 234467999999999999999999999999999999999999999865433222111 100 0
Q ss_pred cc---cccHHHHHh-hcccccC---CCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 633 PQ---LHDIDALAK-MVDPALN---GMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 633 ~~---~~~~~~~~~-~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+. +.......+ ....... .......+..+.+|+.+||+.||++|||+.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 238 PPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 00 000000000 0000000 00012345678999999999999999999999865
No 160
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.5e-40 Score=368.59 Aligned_cols=269 Identities=22% Similarity=0.289 Sum_probs=190.7
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEee-----cCe
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE-----HGQ 482 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~~~ 482 (720)
.++|+..+.||+|+||.||+|.+. +++.||||++..........+.+.+|+.+++.++||||+++++++.. ...
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 367999999999999999999765 68999999997665566667889999999999999999999999843 357
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCC
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a 562 (720)
.|+||||+. ++|.++++ ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 132 ~~lv~e~~~-~~L~~~~~----~~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFR----TPVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp EEEEECCCS-EEHHHHHH----SSCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeccc-cchhhhcc----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccc
Confidence 899999985 69999886 356799999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCc--------------------------cccccccccccccCcccc-ccCCCcccchhhhHHHHHHHHHh----
Q 005001 563 ALTPNTER--------------------------QVSTQMVGAFGYSAPEFA-LSGIYTVKSDVYSFGVVMLELLT---- 611 (720)
Q Consensus 563 ~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlGv~l~ellt---- 611 (720)
+....... ......+||+.|+|||++ .+..++.++|||||||++|||++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~ 283 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKE 283 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccc
Confidence 87643221 122445789999999986 45679999999999999999999
Q ss_pred -------CCCCCCCCCCcch-----------------hhH---H-H-hhccccc------c--HHHHHhhcccccCC---
Q 005001 612 -------GRKPLDSSRPRSE-----------------QSL---V-R-WATPQLH------D--IDALAKMVDPALNG--- 651 (720)
Q Consensus 612 -------g~~pf~~~~~~~~-----------------~~~---~-~-~~~~~~~------~--~~~~~~~~~~~~~~--- 651 (720)
|+++|.+...... ... + . ...+... . .....+........
T Consensus 284 ~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (458)
T 3rp9_A 284 NVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLA 363 (458)
T ss_dssp TCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGG
T ss_pred cccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHH
Confidence 5666654321000 000 0 0 0000000 0 00000000000000
Q ss_pred CCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 652 MYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 652 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
......+.++.+|+.+||+.||++|||++|++++
T Consensus 364 ~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~H 397 (458)
T 3rp9_A 364 ERFPASSADAIHLLKRMLVFNPNKRITINECLAH 397 (458)
T ss_dssp GGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHCCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0012335678999999999999999999999986
No 161
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=3e-40 Score=355.41 Aligned_cols=246 Identities=23% Similarity=0.322 Sum_probs=198.2
Q ss_pred ccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEEecCC
Q 005001 414 QEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (720)
Q Consensus 414 ~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 492 (720)
..+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~ 170 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG--MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG 170 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc--cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 3568999999999999764 68999999997543 34567889999999999999999999999999999999999999
Q ss_pred CCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEe--CCCCceEEcccCCCccCCCCCc
Q 005001 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL--DDELNPHLSDCGLAALTPNTER 570 (720)
Q Consensus 493 gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll--~~~~~~kl~Dfg~a~~~~~~~~ 570 (720)
++|.+++.. ....+++..+..++.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.......
T Consensus 171 ~~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~ 244 (373)
T 2x4f_A 171 GELFDRIID---ESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK 244 (373)
T ss_dssp CEEHHHHHH---TGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB
T ss_pred CcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc
Confidence 999998863 235689999999999999999999999 99999999999999 6678999999999987654322
Q ss_pred cccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccccc-
Q 005001 571 QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPAL- 649 (720)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 649 (720)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......... .++.....
T Consensus 245 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~----------------~~i~~~~~~ 306 (373)
T 2x4f_A 245 --LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETL----------------NNILACRWD 306 (373)
T ss_dssp --CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH----------------HHHHHTCCC
T ss_pred --cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHH----------------HHHHhccCC
Confidence 23357999999999999999999999999999999999999999765422111 11111110
Q ss_pred -CCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 650 -NGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 650 -~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
........+.++.+|+.+||+.||++||++.|++++
T Consensus 307 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 307 LEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp SCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 001112346788999999999999999999999985
No 162
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=351.16 Aligned_cols=276 Identities=23% Similarity=0.358 Sum_probs=203.4
Q ss_pred hcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHH--HHHHhhcCCCCCccccceEEee-----cC
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLE--AVSNMSRLRHPNIVTLAGYCAE-----HG 481 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~--e~~~l~~l~h~niv~l~~~~~~-----~~ 481 (720)
.++|+..+.||+|+||.||+|.. +++.||+|++.... ...+.. |+..+..++||||+++++.+.. ..
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN-----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc-----hhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 36788899999999999999976 68999999986432 233333 4444556899999999986533 23
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------CCCcEEecCCCCCEEeCCCCceE
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC------LPSVVHRNFKSANILLDDELNPH 555 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~------~~~iiH~Dlkp~NIll~~~~~~k 555 (720)
..++||||+++|+|.++++. ...++..+..++.|++.||+|||+.. .++|+||||||+|||++.++.+|
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 160 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSL-----HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV 160 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEE
T ss_pred eEEEEEecCCCCcHHHHHhh-----cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEE
Confidence 67899999999999999963 44589999999999999999999862 23899999999999999999999
Q ss_pred EcccCCCccCCCCC-------ccccccccccccccCcccccc-------CCCcccchhhhHHHHHHHHHhCCCCCCCCCC
Q 005001 556 LSDCGLAALTPNTE-------RQVSTQMVGAFGYSAPEFALS-------GIYTVKSDVYSFGVVMLELLTGRKPLDSSRP 621 (720)
Q Consensus 556 l~Dfg~a~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGv~l~elltg~~pf~~~~~ 621 (720)
|+|||++....... ........||+.|+|||++.+ ..++.++|||||||++|||++|..||.....
T Consensus 161 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~ 240 (336)
T 3g2f_A 161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGES 240 (336)
T ss_dssp ECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSC
T ss_pred EeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccc
Confidence 99999997654321 112234579999999999987 4567899999999999999999877754332
Q ss_pred cch-hhHHHhhccccccHHHHHhhc-ccccCCCCC------hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 622 RSE-QSLVRWATPQLHDIDALAKMV-DPALNGMYP------AKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 622 ~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
... ..................... ........+ ...+..+.++|.+||+.||++|||++|+++.|+++++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~ 320 (336)
T 3g2f_A 241 VPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW 320 (336)
T ss_dssp CCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred hhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence 211 111111111111112222111 111122222 236678999999999999999999999999999998776
Q ss_pred cc
Q 005001 694 SV 695 (720)
Q Consensus 694 ~~ 695 (720)
..
T Consensus 321 ~~ 322 (336)
T 3g2f_A 321 ER 322 (336)
T ss_dssp CC
T ss_pred Hh
Confidence 43
No 163
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.1e-40 Score=353.12 Aligned_cols=269 Identities=20% Similarity=0.287 Sum_probs=196.0
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
..++|+..+.||+|+||.||+|.+. +++.||+|++............+.+|+.++++++||||+++++++...+..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 3467899999999999999999765 689999999976654555566788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEe-----CCCCceEEcccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL-----DDELNPHLSDCGL 561 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll-----~~~~~~kl~Dfg~ 561 (720)
|||+++ +|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+
T Consensus 112 ~e~~~~-~L~~~~~~----~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 112 FEYAEN-DLKKYMDK----NPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp EECCSE-EHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred EecCCC-CHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 999985 99999873 45699999999999999999999999 99999999999999 4555699999999
Q ss_pred CccCCCCCccccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHH-h-hccccccH
Q 005001 562 AALTPNTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVR-W-ATPQLHDI 638 (720)
Q Consensus 562 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~-~-~~~~~~~~ 638 (720)
+........ ......||+.|+|||++.+. .++.++|||||||++|||++|+.||...........+. . ..+.....
T Consensus 184 a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 262 (329)
T 3gbz_A 184 ARAFGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTW 262 (329)
T ss_dssp HHHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTS
T ss_pred ccccCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhh
Confidence 976543222 22345789999999999875 48999999999999999999999997654322211110 0 00000000
Q ss_pred ---HHHHhhcc--cccCC-----CCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 639 ---DALAKMVD--PALNG-----MYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 639 ---~~~~~~~~--~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
........ +.... ..+...+.++.+|+.+||+.||++|||++|++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 263 PGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp TTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 00000000 00000 0011245678899999999999999999999864
No 164
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=2.6e-40 Score=350.03 Aligned_cols=264 Identities=18% Similarity=0.259 Sum_probs=213.5
Q ss_pred chhcHHHHhcCCCcc-ceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEE
Q 005001 401 TVASLQTATNSFSQE-FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYC 477 (720)
Q Consensus 401 ~~~~~~~~~~~y~~~-~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 477 (720)
.+...+...++|.+. +.||+|+||.||+|... +++.||+|++............+.+|+.++..+ +||||+++++++
T Consensus 19 ~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~ 98 (327)
T 3lm5_A 19 YFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVY 98 (327)
T ss_dssp CSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred HHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence 455667777888887 89999999999999776 689999999987665555577889999999998 569999999999
Q ss_pred eecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC---CCce
Q 005001 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD---ELNP 554 (720)
Q Consensus 478 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~---~~~~ 554 (720)
...+..++||||+++|+|.+++.. .....+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+
T Consensus 99 ~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~ 173 (327)
T 3lm5_A 99 ENTSEIILILEYAAGGEIFSLCLP--ELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDI 173 (327)
T ss_dssp ECSSEEEEEEECCTTEEGGGGGSS--CC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCE
T ss_pred EeCCeEEEEEEecCCCcHHHHHHH--hcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcE
Confidence 999999999999999999998852 2346799999999999999999999999 9999999999999998 7899
Q ss_pred EEcccCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccc
Q 005001 555 HLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQ 634 (720)
Q Consensus 555 kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 634 (720)
||+|||++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+
T Consensus 174 kL~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i------ 245 (327)
T 3lm5_A 174 KIVDFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNI------ 245 (327)
T ss_dssp EECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH------
T ss_pred EEeeCccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHH------
Confidence 999999998764332 223457999999999999999999999999999999999999999764432111111
Q ss_pred cccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 635 LHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.. .............+..+.+++.+||+.||++||++++++++
T Consensus 246 -------~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 246 -------SQ-VNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp -------HH-TCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred -------Hh-cccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 00 11111222234566788999999999999999999999875
No 165
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=2e-40 Score=343.29 Aligned_cols=253 Identities=22% Similarity=0.376 Sum_probs=207.4
Q ss_pred HHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEee------
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE------ 479 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------ 479 (720)
...++|+..+.||+|+||.||+|.+. +++.||+|++.... ..+.+|++++++++||||+++++++..
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (284)
T 2a19_B 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPE 81 (284)
T ss_dssp HHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--
T ss_pred hhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcc
Confidence 34567899999999999999999886 79999999996532 245689999999999999999998854
Q ss_pred ----------cCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeC
Q 005001 480 ----------HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD 549 (720)
Q Consensus 480 ----------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~ 549 (720)
....++||||+++++|.++++.. ....+++..+..++.|++.||.|||+. +|+||||||+||+++
T Consensus 82 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~ 156 (284)
T 2a19_B 82 TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR--RGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLV 156 (284)
T ss_dssp -------CCEEEEEEEEECCCCSCBHHHHHHHG--GGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE
T ss_pred cccccccccCcceEEEEEeccCCCCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEc
Confidence 44579999999999999999743 246789999999999999999999999 999999999999999
Q ss_pred CCCceEEcccCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHH
Q 005001 550 DELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVR 629 (720)
Q Consensus 550 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~ 629 (720)
.++.+||+|||++........ .....||+.|+|||.+.+..++.++||||||+++|||++|..|+... .
T Consensus 157 ~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-----~---- 225 (284)
T 2a19_B 157 DTKQVKIGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET-----S---- 225 (284)
T ss_dssp ETTEEEECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-----H----
T ss_pred CCCCEEECcchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-----H----
Confidence 999999999999987654322 23456999999999999999999999999999999999999887421 0
Q ss_pred hhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhc
Q 005001 630 WATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRAS 694 (720)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 694 (720)
........ ...+...+..+.+++.+||+.||++||++.|++++|..+.+...
T Consensus 226 ---------~~~~~~~~----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 226 ---------KFFTDLRD----GIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp ---------HHHHHHHT----TCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred ---------HHHHHhhc----ccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 00111111 11233455678899999999999999999999999988755443
No 166
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=4.6e-40 Score=347.23 Aligned_cols=253 Identities=21% Similarity=0.288 Sum_probs=208.2
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccCh----HHHHHHHHHHHHhhcCCCCCccccceEEeecCe
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL----QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (720)
..++|+..+.||+|+||.||+|.+. +|+.||+|.+....... ...+.+.+|+.++++++||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 89 (321)
T 2a2a_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD 89 (321)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence 3467889999999999999999876 68999999987544322 135678999999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCC----ceEEcc
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL----NPHLSD 558 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~----~~kl~D 558 (720)
.++||||+++++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|
T Consensus 90 ~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~D 162 (321)
T 2a2a_A 90 VVLILELVSGGELFDFLA----QKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLID 162 (321)
T ss_dssp EEEEECCCCSCBHHHHHH----TCSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred EEEEEEcCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEcc
Confidence 999999999999999997 346789999999999999999999999 999999999999999888 799999
Q ss_pred cCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccH
Q 005001 559 CGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDI 638 (720)
Q Consensus 559 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 638 (720)
||++....... ......||+.|+|||++.+..++.++||||||+++|||++|..||..........
T Consensus 163 fg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~------------ 228 (321)
T 2a2a_A 163 FGLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA------------ 228 (321)
T ss_dssp CTTCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH------------
T ss_pred CccceecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHH------------
Confidence 99998665432 2234579999999999999999999999999999999999999997643221111
Q ss_pred HHHHhhcccccC--CCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 639 DALAKMVDPALN--GMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 639 ~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.+...... .......+..+.+++.+||+.||++||++.|++++
T Consensus 229 ----~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 229 ----NITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp ----HHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred ----HHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11110000 00012345678899999999999999999999975
No 167
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.7e-40 Score=341.43 Aligned_cols=252 Identities=27% Similarity=0.401 Sum_probs=187.6
Q ss_pred hcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccC-hHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
.++|+..+.||+|+||.||+|.. .+|+.||+|.+...... ......+.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35688899999999999999987 47899999999644321 12246788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||+++++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 90 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 90 LEMCHNGEMNRYLKN---RVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp EECCTTEEHHHHHHT---CSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 999999999999872 246789999999999999999999999 99999999999999999999999999998664
Q ss_pred CCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
.... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||......... .+...
T Consensus 164 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----------------~~~~~ 226 (278)
T 3cok_A 164 MPHE-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL----------------NKVVL 226 (278)
T ss_dssp -----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------------------CCS
T ss_pred CCCC-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH----------------HHHhh
Confidence 3222 123357999999999999999999999999999999999999999764432111 11111
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.. ...+...+.++.+++.+||+.||++||++.+++++
T Consensus 227 ~~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 227 AD--YEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp SC--CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cc--cCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 11 12344556788999999999999999999999864
No 168
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=9.1e-41 Score=346.99 Aligned_cols=254 Identities=24% Similarity=0.381 Sum_probs=203.6
Q ss_pred hcCCCccceeccCCCcEEEEEEEcC-C-------cEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFAN-G-------KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH 480 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 480 (720)
.++|...+.||+|+||.||+|.+.. + ..||+|++.... ....+.+.+|+.++++++||||+++++++...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH--RNYSESFFEAASMMSKLSHKHLVLNYGVCVCG 84 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG--GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence 4578889999999999999997653 3 479999986543 34467789999999999999999999999999
Q ss_pred CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCc-------
Q 005001 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN------- 553 (720)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~------- 553 (720)
+..++||||+++|+|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.
T Consensus 85 ~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~ 158 (289)
T 4fvq_A 85 DENILVQEFVKFGSLDTYLKK---NKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPP 158 (289)
T ss_dssp TCCEEEEECCTTCBHHHHHHH---TGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCC
T ss_pred CCCEEEEECCCCCCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccc
Confidence 999999999999999999974 234489999999999999999999999 9999999999999998887
Q ss_pred -eEEcccCCCccCCCCCccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhh
Q 005001 554 -PHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWA 631 (720)
Q Consensus 554 -~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~ 631 (720)
+||+|||++...... ....||+.|+|||++.+ ..++.++|||||||++|||++|..|+..........
T Consensus 159 ~~kl~Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~----- 228 (289)
T 4fvq_A 159 FIKLSDPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKL----- 228 (289)
T ss_dssp EEEECCCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH-----
T ss_pred eeeeccCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHH-----
Confidence 999999998654321 23468999999999988 778999999999999999999655544322211110
Q ss_pred ccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 632 TPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
..... ....+...+..+.+++.+||+.||++||++.+++++|+++....
T Consensus 229 -----------~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 229 -----------QFYED--RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp -----------HHHHT--TCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred -----------HHhhc--cCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 00000 11122333456889999999999999999999999998876543
No 169
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2e-40 Score=352.42 Aligned_cols=251 Identities=25% Similarity=0.348 Sum_probs=202.4
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 485 (720)
..++|+..+.||+|+||.||+|.+. +++.||+|++...... ..+|++++.++ +||||+++++++.+.+..++
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l 93 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD------PTEEIEILLRYGQHPNIITLKDVYDDGKYVYV 93 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC------CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC------hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEE
Confidence 3567899999999999999999875 6889999999654322 23567777766 79999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCC----CceEEcccCC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE----LNPHLSDCGL 561 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~----~~~kl~Dfg~ 561 (720)
||||+++|+|.+++. ..+.+++.++..++.||+.||+|||+. +|+||||||+|||+..+ +.+||+|||+
T Consensus 94 v~E~~~gg~L~~~i~----~~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~ 166 (342)
T 2qr7_A 94 VTELMKGGELLDKIL----RQKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGF 166 (342)
T ss_dssp EECCCCSCBHHHHHH----TCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTT
T ss_pred EEeCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCC
Confidence 999999999999986 346799999999999999999999999 99999999999998543 3599999999
Q ss_pred CccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHH
Q 005001 562 AALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDAL 641 (720)
Q Consensus 562 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (720)
+........ .....+||+.|+|||++.+..++.++|||||||++|||++|..||............
T Consensus 167 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~------------- 232 (342)
T 2qr7_A 167 AKQLRAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEIL------------- 232 (342)
T ss_dssp CEECBCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHH-------------
T ss_pred cccCcCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHH-------------
Confidence 986544322 233467999999999999888999999999999999999999999764322211111
Q ss_pred Hhhcccc--cCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 642 AKMVDPA--LNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 642 ~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
..+.... .........+..+.+|+.+||+.||++||++.+++++
T Consensus 233 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 233 ARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp HHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred HHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1111111 1112234566788999999999999999999999976
No 170
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.3e-40 Score=349.11 Aligned_cols=272 Identities=22% Similarity=0.363 Sum_probs=215.7
Q ss_pred hcCCCccceeccCCCcEEEEEEE-----cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecC--
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEF-----ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG-- 481 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-- 481 (720)
.++|+..+.||+|+||.||+|.+ .+++.||+|++... .......+.+|+.++++++||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 117 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 117 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC--CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCC
Confidence 35688899999999999999984 36889999999753 3445678899999999999999999999986644
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCC
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 561 (720)
..++||||+++++|.+++.. ....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~ 191 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 191 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHH---STTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTT
T ss_pred ceEEEEECCCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcc
Confidence 78999999999999999974 235689999999999999999999999 999999999999999999999999999
Q ss_pred CccCCCCCccc--cccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccc---
Q 005001 562 AALTPNTERQV--STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLH--- 636 (720)
Q Consensus 562 a~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~--- 636 (720)
+.......... .....+|..|+|||.+.+..++.++||||||+++|||++|..||..... ...........
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~----~~~~~~~~~~~~~~ 267 (326)
T 2w1i_A 192 TKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA----EFMRMIGNDKQGQM 267 (326)
T ss_dssp CEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHH----HHHHHHCTTCCTHH
T ss_pred hhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHH----HHHHhhccccchhh
Confidence 98765433221 2234578889999999999999999999999999999999999863210 00110000000
Q ss_pred cHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHh
Q 005001 637 DIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQR 692 (720)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~ 692 (720)
....+.+.+........+..++..+.++|.+||+.||++||++.|+++.|+++.++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 268 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp HHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 01112222222333344566778899999999999999999999999999998765
No 171
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=9.1e-40 Score=355.10 Aligned_cols=251 Identities=20% Similarity=0.267 Sum_probs=192.0
Q ss_pred cCCCcc-ceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHh-hcCCCCCccccceEEee----cCe
Q 005001 410 NSFSQE-FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNM-SRLRHPNIVTLAGYCAE----HGQ 482 (720)
Q Consensus 410 ~~y~~~-~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~----~~~ 482 (720)
++|... ++||+|+||.||+|.+. +++.||||++... ..+.+|+.++ +..+||||+++++++.. .+.
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~ 133 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 133 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcE
Confidence 455555 68999999999999775 6889999998532 3456777776 44589999999999875 567
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC---CCceEEccc
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD---ELNPHLSDC 559 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~---~~~~kl~Df 559 (720)
.|+||||+++|+|.+++... ....+++.++..++.||+.||+|||+. +|+||||||+|||++. ++.+||+||
T Consensus 134 ~~lv~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DF 208 (400)
T 1nxk_A 134 LLIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 208 (400)
T ss_dssp EEEEEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCC
T ss_pred EEEEEEeCCCCcHHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEec
Confidence 89999999999999999732 234699999999999999999999999 9999999999999998 789999999
Q ss_pred CCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHH
Q 005001 560 GLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDID 639 (720)
Q Consensus 560 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 639 (720)
|+++...... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .
T Consensus 209 G~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~------------~ 274 (400)
T 1nxk_A 209 GFAKETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP------------G 274 (400)
T ss_dssp TTCEECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCC------------S
T ss_pred ccccccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccH------------H
Confidence 9998654322 2234679999999999999999999999999999999999999997654321100 0
Q ss_pred HHHhhcccccC--CCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 640 ALAKMVDPALN--GMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 640 ~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
...++...... .......+.++.+||++||+.||++|||+.|++++-
T Consensus 275 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 275 MKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp HHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred HHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 00011111111 111134567889999999999999999999999863
No 172
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=5.2e-40 Score=366.94 Aligned_cols=252 Identities=23% Similarity=0.341 Sum_probs=207.4
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
..++|++.+.||+|+||.||+|.+. +++.||+|++............+.+|+.++++++||||+++++++...+..++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 4567999999999999999999875 789999999975544444567889999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeC---CCCceEEcccCCCc
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD---DELNPHLSDCGLAA 563 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~---~~~~~kl~Dfg~a~ 563 (720)
|||+.+|+|.+.+.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++ .++.+||+|||++.
T Consensus 100 ~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 100 GELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp ECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred EEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 999999999998863 35799999999999999999999999 999999999999995 45679999999998
Q ss_pred cCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHh
Q 005001 564 LTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAK 643 (720)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (720)
...... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||......... .+
T Consensus 173 ~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~----------------~~ 233 (486)
T 3mwu_A 173 CFQQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL----------------KR 233 (486)
T ss_dssp TBCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----------------HH
T ss_pred ECCCCC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH----------------HH
Confidence 664332 2334579999999999876 5899999999999999999999999764322111 11
Q ss_pred hcccccCCC--CChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 644 MVDPALNGM--YPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 644 ~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+........ .....+..+.+||.+||+.||++|||+.+++++
T Consensus 234 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 234 VETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp HHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred HHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 111111111 113456788999999999999999999999986
No 173
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=6e-40 Score=338.67 Aligned_cols=248 Identities=25% Similarity=0.341 Sum_probs=205.5
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
..++|+..+.||+|+||.||+|.+. ++..||+|++..... .....+.+|++++++++||||+++++++...+..++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV--EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLV 84 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc--chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEE
Confidence 4567899999999999999999876 477899999875432 2356788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEe---CCCCceEEcccCCCc
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL---DDELNPHLSDCGLAA 563 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll---~~~~~~kl~Dfg~a~ 563 (720)
|||+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++.
T Consensus 85 ~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~ 157 (277)
T 3f3z_A 85 MELCTGGELFERVVH----KRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA 157 (277)
T ss_dssp EECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EeccCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccce
Confidence 999999999998863 45689999999999999999999999 99999999999999 788999999999997
Q ss_pred cCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHh
Q 005001 564 LTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAK 643 (720)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (720)
...... ......||+.|+|||.+.+. ++.++||||||+++|||++|+.||......... .+
T Consensus 158 ~~~~~~--~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~----------------~~ 218 (277)
T 3f3z_A 158 RFKPGK--MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVM----------------LK 218 (277)
T ss_dssp ECCTTS--CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----------------HH
T ss_pred eccCcc--chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHH----------------HH
Confidence 664432 22345799999999988664 899999999999999999999999764322111 11
Q ss_pred hcccccCCCCCh----hHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 644 MVDPALNGMYPA----KSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 644 ~~~~~~~~~~~~----~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+..... ..+. ..+..+.+++.+||+.||++||++.+++++
T Consensus 219 ~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 219 IREGTF--TFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp HHHCCC--CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred HHhCCC--CCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111111 1121 345678999999999999999999999975
No 174
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=7.8e-40 Score=350.02 Aligned_cols=269 Identities=21% Similarity=0.302 Sum_probs=204.2
Q ss_pred cCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEee--------c
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE--------H 480 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--------~ 480 (720)
++|+..+.||+|+||.||+|.+ .+|+.||+|++............+.+|+.+++.++||||+++++++.. .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 5788999999999999999987 478999999997655444445678899999999999999999999877 4
Q ss_pred CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccC
Q 005001 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (720)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 560 (720)
+..++||||+++ +|.+.+.. ....+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 169 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSN---VLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFG 169 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred ceEEEEEeccCC-CHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccch
Confidence 468999999985 77777752 345799999999999999999999999 99999999999999999999999999
Q ss_pred CCccCCCCCc---cccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcc---
Q 005001 561 LAALTPNTER---QVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATP--- 633 (720)
Q Consensus 561 ~a~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~--- 633 (720)
+++....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+.....
T Consensus 170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~ 249 (351)
T 3mi9_A 170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 249 (351)
T ss_dssp TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 9976543221 22234578999999999986 4589999999999999999999999987554322222211000
Q ss_pred --ccccHHHHHhh--cccccCCCCCh-------hHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 634 --QLHDIDALAKM--VDPALNGMYPA-------KSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 634 --~~~~~~~~~~~--~~~~~~~~~~~-------~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.+......... ........... ..+..+.+|+.+||+.||++|||++|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 00000000000 00000000000 013468899999999999999999999976
No 175
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=8.4e-40 Score=342.25 Aligned_cols=251 Identities=25% Similarity=0.426 Sum_probs=210.0
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.+.|+..+.||+|+||.||+|... +++.||+|.+..... ......+.+|+.+++.++||||+++++++...+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 99 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 99 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC-STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence 456888999999999999999764 688999999865432 234677899999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++++|.+++. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 100 e~~~~~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 171 (303)
T 3a7i_A 100 EYLGGGSALDLLE-----PGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 171 (303)
T ss_dssp ECCTTEEHHHHHT-----TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred EeCCCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCc
Confidence 9999999999986 46799999999999999999999999 999999999999999999999999999976543
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
.. .......||+.|+|||++.+..++.++||||||+++|||++|+.||........... ..+
T Consensus 172 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-------------~~~---- 233 (303)
T 3a7i_A 172 TQ-IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFL-------------IPK---- 233 (303)
T ss_dssp TB-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-------------HHH----
T ss_pred cc-cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHH-------------hhc----
Confidence 32 122345799999999999999999999999999999999999999975432211110 111
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
......+...+..+.+++.+||+.||++||++.+++++.
T Consensus 234 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 234 NNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp SCCCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred CCCCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 111123345567789999999999999999999999864
No 176
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2.7e-40 Score=351.97 Aligned_cols=259 Identities=26% Similarity=0.387 Sum_probs=206.0
Q ss_pred HHHhcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHH-hhcCCCCCccccceEEeecCeE
Q 005001 406 QTATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSN-MSRLRHPNIVTLAGYCAEHGQR 483 (720)
Q Consensus 406 ~~~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~ 483 (720)
+...++|+..+.||+|+||.||+|.+ .+|+.||||++........ ...+..|... ++.++||||+++++++...+..
T Consensus 47 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~ 125 (340)
T 3an0_A 47 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE-QKRLLMDLDISMRTVDCPFTVTFYGALFREGDV 125 (340)
T ss_dssp CCCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHH-HHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCE
T ss_pred EEehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHH-HHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcE
Confidence 34456788999999999999999987 4789999999976544433 3444555544 7788999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
++||||+++ +|.+++.........+++..+..++.||+.||+|||+.. +|+||||||+||+++.++.+||+|||+++
T Consensus 126 ~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 202 (340)
T 3an0_A 126 WICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISG 202 (340)
T ss_dssp EEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHH
T ss_pred EEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCce
Confidence 999999976 999988755445678999999999999999999999752 89999999999999999999999999987
Q ss_pred cCCCCCccccccccccccccCcccccc----CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHH
Q 005001 564 LTPNTERQVSTQMVGAFGYSAPEFALS----GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDID 639 (720)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 639 (720)
..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .
T Consensus 203 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~---------------~ 265 (340)
T 3an0_A 203 YLVDS--VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF---------------Q 265 (340)
T ss_dssp HHSCH--HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH---------------H
T ss_pred ecccc--cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchH---------------H
Confidence 65332 12233579999999999753 468999999999999999999999997543211 1
Q ss_pred HHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 640 ALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.+.+..........+...+.++.+++.+||+.||++||++.|++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 266 QLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp HHHHHHHSCCCCCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHhcCCCCCCCcccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 1111111111111223456789999999999999999999999985
No 177
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-40 Score=357.23 Aligned_cols=257 Identities=24% Similarity=0.355 Sum_probs=207.5
Q ss_pred hcCCCccceeccCCCcEEEEEEE----cCCcEEEEEEcccccc--ChHHHHHHHHHHHHhhcC-CCCCccccceEEeecC
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEF----ANGKIMAVKKIDNAAL--SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHG 481 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 481 (720)
.++|+..+.||+|+||.||+|+. .+++.||+|+++.... .......+.+|+++++.+ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 35789999999999999999987 3789999999875432 112234566788888888 6999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCC
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 561 (720)
..++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~ 205 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQ----RERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGL 205 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSE
T ss_pred eEEEEeecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCC
Confidence 99999999999999999973 35789999999999999999999999 999999999999999999999999999
Q ss_pred CccCCCCCccccccccccccccCcccccc--CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHH
Q 005001 562 AALTPNTERQVSTQMVGAFGYSAPEFALS--GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDID 639 (720)
Q Consensus 562 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 639 (720)
++..............||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+
T Consensus 206 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~----------- 274 (355)
T 1vzo_A 206 SKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEI----------- 274 (355)
T ss_dssp EEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHH-----------
T ss_pred CeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHH-----------
Confidence 98665443334445689999999999986 34789999999999999999999999754432211111
Q ss_pred HHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHH
Q 005001 640 ALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRP-----PMSEVVQAL 686 (720)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~ell~~L 686 (720)
...... ....++...+..+.+||.+||+.||++|| +++|++++.
T Consensus 275 -~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 275 -SRRILK--SEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp -HHHHHH--CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred -HHHHhc--cCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 111111 11234556677889999999999999999 999998764
No 178
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=7.3e-40 Score=352.14 Aligned_cols=259 Identities=16% Similarity=0.215 Sum_probs=209.1
Q ss_pred HHHhcCCCccceeccCCCcEEEEEE------EcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCC---CCCccccceE
Q 005001 406 QTATNSFSQEFLIGEGSLGRVYRAE------FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR---HPNIVTLAGY 476 (720)
Q Consensus 406 ~~~~~~y~~~~~lG~G~fg~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~ 476 (720)
+...++|...+.||+|+||.||+|. ..+++.||+|++.... ...+.+|++++..++ |+||+.++++
T Consensus 61 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~e~~~~~~l~~~~~~~iv~~~~~ 135 (365)
T 3e7e_A 61 QLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN-----PWEFYIGTQLMERLKPSMQHMFMKFYSA 135 (365)
T ss_dssp ECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC-----HHHHHHHHHHHHHSCGGGGGGBCCEEEE
T ss_pred EECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC-----hhHHHHHHHHHHHhhhhhhhhhhhhhee
Confidence 3445779999999999999999993 4568899999996532 345666777776665 9999999999
Q ss_pred EeecCeEEEEEEecCCCCHHHHhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC-----
Q 005001 477 CAEHGQRLLVYEYVGNGNLHDMLHFADD-SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD----- 550 (720)
Q Consensus 477 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~----- 550 (720)
+...+..++||||+++|+|.++++.... ....+++..+..++.||+.||+|||+. +|+||||||+|||++.
T Consensus 136 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~ 212 (365)
T 3e7e_A 136 HLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQ 212 (365)
T ss_dssp EECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC
T ss_pred eecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCc
Confidence 9999999999999999999999975433 356799999999999999999999999 9999999999999998
Q ss_pred ------CCceEEcccCCCccCCC-CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcc
Q 005001 551 ------ELNPHLSDCGLAALTPN-TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRS 623 (720)
Q Consensus 551 ------~~~~kl~Dfg~a~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~ 623 (720)
++.+||+|||+++.... .........+||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 213 ~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~ 292 (365)
T 3e7e_A 213 DDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE 292 (365)
T ss_dssp ------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE
T ss_pred cccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc
Confidence 89999999999965431 22233445679999999999999999999999999999999999999996432210
Q ss_pred hhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCC-CCHHHHHHHHHHHHHhhc
Q 005001 624 EQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFR-PPMSEVVQALVRLVQRAS 694 (720)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-Ps~~ell~~L~~~~~~~~ 694 (720)
.. ...... .. ...+.+.+++..|++.+|.+| |+++++.+.|++++....
T Consensus 293 ~~-------------------~~~~~~-~~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~~ 342 (365)
T 3e7e_A 293 CK-------------------PEGLFR-RL--PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHY 342 (365)
T ss_dssp EE-------------------ECSCCT-TC--SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred ee-------------------echhcc-cc--CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHhh
Confidence 00 000111 01 235567899999999999998 788889999999887753
No 179
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=7.8e-40 Score=340.94 Aligned_cols=251 Identities=22% Similarity=0.358 Sum_probs=210.7
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
.++|...+.||+|+||.||+|.+. +++.||+|.+..... .....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 467888999999999999999876 578899999865433 344567788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||+++++|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 94 ~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 94 LELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166 (294)
T ss_dssp EECCTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence 999999999998863 35789999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD 646 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (720)
.... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||........ ......
T Consensus 167 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----------------~~~~~~ 229 (294)
T 2rku_A 167 YDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET----------------YLRIKK 229 (294)
T ss_dssp STTC-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----------------HHHHHT
T ss_pred cCcc-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH----------------HHHHhh
Confidence 3222 22345799999999999999999999999999999999999999976432111 111111
Q ss_pred cccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 647 PALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 647 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
. ....+...+..+.+++.+||+.||++||++++++++
T Consensus 230 ~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 230 N--EYSIPKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp T--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred c--cCCCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 1 112344566788999999999999999999999986
No 180
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=3.8e-40 Score=342.63 Aligned_cols=260 Identities=25% Similarity=0.370 Sum_probs=202.5
Q ss_pred hcCCCccceeccCCCcEEEEEEEc--CCc--EEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA--NGK--IMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~--~~~--~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (720)
.++|+..+.||+|+||.||+|.+. +++ .||+|+++.... .....+.+.+|+.++++++||||+++++++.... .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 457888999999999999999764 233 689999875533 2345678899999999999999999999987754 8
Q ss_pred EEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
++|+||+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 96 ~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 169 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR 169 (291)
T ss_dssp EEEEECCTTCBHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred eeeEecccCCCHHHHHHhc---cCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccc
Confidence 9999999999999999742 35689999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCccc--cccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHH
Q 005001 564 LTPNTERQV--STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDA 640 (720)
Q Consensus 564 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 640 (720)
......... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... ..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----------------~~ 233 (291)
T 1u46_A 170 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS----------------QI 233 (291)
T ss_dssp ECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----------------HH
T ss_pred cccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH----------------HH
Confidence 765443221 233467889999999999999999999999999999999 99999764321 11
Q ss_pred HHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHH
Q 005001 641 LAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQ 691 (720)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~ 691 (720)
...+.........+...+..+.+++.+||+.||++||++.++++.|+++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 234 LHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp HHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred HHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 112222222233445667889999999999999999999999999987644
No 181
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.9e-39 Score=356.56 Aligned_cols=201 Identities=26% Similarity=0.359 Sum_probs=170.8
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec-----Ce
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH-----GQ 482 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 482 (720)
.++|+..+.||+|+||.||+|.+. +++.||||++..........+.+.+|+.+++.++||||+++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 467999999999999999999775 588999999987655666678899999999999999999999998766 57
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCC
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a 562 (720)
.|+||||++ |+|.++++ ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 105 ~~lv~e~~~-~~L~~~~~----~~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFK----TPIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp EEEEEECCS-EEHHHHHH----SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecCC-cCHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 899999986 59999997 356799999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCcc---------------------ccccccccccccCcccc-ccCCCcccchhhhHHHHHHHHHhCCCCCC
Q 005001 563 ALTPNTERQ---------------------VSTQMVGAFGYSAPEFA-LSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (720)
Q Consensus 563 ~~~~~~~~~---------------------~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlGv~l~elltg~~pf~ 617 (720)
+........ .....+||+.|+|||++ .+..++.++|||||||++|||++|..||.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 876433211 22456899999999986 55669999999999999999998655443
No 182
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1e-39 Score=357.18 Aligned_cols=254 Identities=22% Similarity=0.323 Sum_probs=195.4
Q ss_pred HHHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccC------hHHHHHHHHHHHHhhcCCCCCccccceEEe
Q 005001 406 QTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS------LQEEDNFLEAVSNMSRLRHPNIVTLAGYCA 478 (720)
Q Consensus 406 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 478 (720)
....++|...+.||+|+||.||+|.+. +++.||+|++...... ......+.+|+.++++++||||+++++++.
T Consensus 131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~ 210 (419)
T 3i6u_A 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 210 (419)
T ss_dssp HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE
T ss_pred hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 345678999999999999999999765 5899999998754321 112235789999999999999999999975
Q ss_pred ecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCC---ceE
Q 005001 479 EHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL---NPH 555 (720)
Q Consensus 479 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~---~~k 555 (720)
.+..++||||+++|+|.+++. ....+++.++..++.|++.||+|||+. +|+||||||+|||++.++ .+|
T Consensus 211 -~~~~~lv~e~~~~g~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~k 282 (419)
T 3i6u_A 211 -AEDYYIVLELMEGGELFDKVV----GNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIK 282 (419)
T ss_dssp -SSEEEEEEECCTTCBGGGGTS----SSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEE
T ss_pred -cCceEEEEEcCCCCcHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEE
Confidence 456899999999999999886 356799999999999999999999999 999999999999997544 599
Q ss_pred EcccCCCccCCCCCccccccccccccccCcccccc---CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchh-hHHHhh
Q 005001 556 LSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALS---GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQ-SLVRWA 631 (720)
Q Consensus 556 l~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~-~~~~~~ 631 (720)
|+|||+++..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... ..+.
T Consensus 283 l~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~-- 358 (419)
T 3i6u_A 283 ITDFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT-- 358 (419)
T ss_dssp ECCSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHH--
T ss_pred EeecccceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHh--
Confidence 9999999876432 22344679999999999864 66889999999999999999999999764332111 1110
Q ss_pred ccccccHHHHHhhcccccCC--CCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 632 TPQLHDIDALAKMVDPALNG--MYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
...... ......+..+.+++.+||+.||++||+++|++++
T Consensus 359 --------------~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 359 --------------SGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp --------------TTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred --------------cCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 000000 0011245678999999999999999999999975
No 183
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.2e-40 Score=350.56 Aligned_cols=265 Identities=22% Similarity=0.330 Sum_probs=195.5
Q ss_pred HHHHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCC-CCCccccceEEe----
Q 005001 405 LQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCA---- 478 (720)
Q Consensus 405 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~---- 478 (720)
+.....+|+..+.||+|+||.||+|.+. +++.||+|++... .......+.+|+.++.++. ||||+++++++.
T Consensus 23 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~ 100 (337)
T 3ll6_A 23 VELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKE 100 (337)
T ss_dssp EEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTT
T ss_pred eeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC--chHHHHHHHHHHHHHHHhccCCChhhcccccccccc
Confidence 3344568999999999999999999875 6899999998543 3445677889999999995 999999999983
Q ss_pred ----ecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEEecCCCCCEEeCCCC
Q 005001 479 ----EHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS--VVHRNFKSANILLDDEL 552 (720)
Q Consensus 479 ----~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~--iiH~Dlkp~NIll~~~~ 552 (720)
.....++||||+. |+|.+++.... ....+++.++..++.|++.||+|||+. + |+||||||+|||++.++
T Consensus 101 ~~~~~~~~~~lv~e~~~-g~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~ 175 (337)
T 3ll6_A 101 ESDTGQAEFLLLTELCK-GQLVEFLKKME-SRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQG 175 (337)
T ss_dssp TSTTSSEEEEEEEECCS-EEHHHHHHHHH-TTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTS
T ss_pred ccccCCceEEEEEEecC-CCHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCC
Confidence 3445799999996 69999886433 245799999999999999999999998 7 99999999999999999
Q ss_pred ceEEcccCCCccCCCCCccc-----------cccccccccccCcccc---ccCCCcccchhhhHHHHHHHHHhCCCCCCC
Q 005001 553 NPHLSDCGLAALTPNTERQV-----------STQMVGAFGYSAPEFA---LSGIYTVKSDVYSFGVVMLELLTGRKPLDS 618 (720)
Q Consensus 553 ~~kl~Dfg~a~~~~~~~~~~-----------~~~~~gt~~y~aPE~~---~~~~~~~~~DvwSlGv~l~elltg~~pf~~ 618 (720)
.+||+|||++.......... .....||+.|+|||++ .+..++.++|||||||++|||++|+.||..
T Consensus 176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 255 (337)
T 3ll6_A 176 TIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFED 255 (337)
T ss_dssp CEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred CEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence 99999999998765432211 1134699999999998 567789999999999999999999999965
Q ss_pred CCCcchhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhccc
Q 005001 619 SRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVV 696 (720)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~~~ 696 (720)
..... ..........+...+..+.+++.+||+.||++||++.|++++|.++.......
T Consensus 256 ~~~~~--------------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~~ 313 (337)
T 3ll6_A 256 GAKLR--------------------IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVN 313 (337)
T ss_dssp ------------------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTCC
T ss_pred hhHHH--------------------hhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCCC
Confidence 32210 01111111122233445789999999999999999999999999998765543
No 184
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=354.79 Aligned_cols=265 Identities=18% Similarity=0.183 Sum_probs=199.1
Q ss_pred hcCCCccceeccCCCcEEEEEEEc----CCcEEEEEEccccccChHH---------HHHHHHHHHHhhcCCCCCccccce
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAALSLQE---------EDNFLEAVSNMSRLRHPNIVTLAG 475 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~---------~~~~~~e~~~l~~l~h~niv~l~~ 475 (720)
.++|...+.||+|+||.||+|.+. ++..||+|++......... ...+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 467889999999999999999875 5778999998654321111 134667888899999999999999
Q ss_pred EEee----cCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCC
Q 005001 476 YCAE----HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE 551 (720)
Q Consensus 476 ~~~~----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~ 551 (720)
++.. ....++||||+ +++|.+++.. .+.+++.++..++.||+.||+|||+. +|+||||||+|||++.+
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~ 187 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQ----NGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYK 187 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBG----GGBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccC
Confidence 9887 67899999999 9999999973 23799999999999999999999999 99999999999999888
Q ss_pred C--ceEEcccCCCccCCCCCc------cccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcc
Q 005001 552 L--NPHLSDCGLAALTPNTER------QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRS 623 (720)
Q Consensus 552 ~--~~kl~Dfg~a~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~ 623 (720)
+ .+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 188 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~ 267 (345)
T 2v62_A 188 NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP 267 (345)
T ss_dssp STTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH
T ss_pred CCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc
Confidence 7 999999999976543211 11234579999999999999999999999999999999999999996432211
Q ss_pred hhhHHHhhccccccHHHHHhhcccccC-CCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 005001 624 EQSLVRWATPQLHDIDALAKMVDPALN-GMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRL 689 (720)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~ 689 (720)
....... ............ .......+.++.+++.+||+.||++||++++|++.|+++
T Consensus 268 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 326 (345)
T 2v62_A 268 VAVQTAK--------TNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH 326 (345)
T ss_dssp HHHHHHH--------HHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred HHHHHHH--------HhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence 1110000 000000000000 000114556899999999999999999999999998764
No 185
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=5.9e-40 Score=367.10 Aligned_cols=253 Identities=23% Similarity=0.322 Sum_probs=202.9
Q ss_pred HHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
...++|+..+.||+|+||.||+|.+. ++..||+|++............+.+|+.+++.++||||+++++++...+..++
T Consensus 34 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 113 (494)
T 3lij_A 34 HLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYL 113 (494)
T ss_dssp CHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred chhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 34567999999999999999999875 68899999997665444556778999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCC---CceEEcccCCC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE---LNPHLSDCGLA 562 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~---~~~kl~Dfg~a 562 (720)
||||+++|+|.+.+.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.. +.+||+|||++
T Consensus 114 v~e~~~~g~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a 186 (494)
T 3lij_A 114 VMECYKGGELFDEIIH----RMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLS 186 (494)
T ss_dssp EEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCC
Confidence 9999999999998863 36789999999999999999999999 99999999999999764 55999999999
Q ss_pred ccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 563 ALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
....... ......||+.|+|||++. ..++.++||||+||++|+|++|..||......... .
T Consensus 187 ~~~~~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~----------------~ 247 (494)
T 3lij_A 187 AVFENQK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEIL----------------R 247 (494)
T ss_dssp EECBTTB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----------------H
T ss_pred eECCCCc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHH----------------H
Confidence 8764432 234467999999999886 56999999999999999999999999765432111 1
Q ss_pred hhcccccCCCC--ChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 643 KMVDPALNGMY--PAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 643 ~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.+......... ....+..+.+|+.+||+.||++|||+.|++++
T Consensus 248 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 248 KVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp HHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred HHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 11111111111 12345678999999999999999999999976
No 186
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=4.4e-40 Score=346.11 Aligned_cols=263 Identities=23% Similarity=0.347 Sum_probs=210.8
Q ss_pred cchhcHHHHhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCC--CCCccccceEE
Q 005001 400 YTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR--HPNIVTLAGYC 477 (720)
Q Consensus 400 ~~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~ 477 (720)
+.+..+....++|+..+.||+|+||.||+|.+.+++.||+|++............+.+|+.++.+++ ||||+++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~ 97 (313)
T 3cek_A 18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 97 (313)
T ss_dssp --CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence 3344555566789999999999999999999888999999999766556667788999999999996 59999999999
Q ss_pred eecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEc
Q 005001 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLS 557 (720)
Q Consensus 478 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~ 557 (720)
...+..++||| +.+++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||++++ +.+||+
T Consensus 98 ~~~~~~~lv~e-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~ 168 (313)
T 3cek_A 98 ITDQYIYMVME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLI 168 (313)
T ss_dssp ECSSEEEEEEC-CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEEC
T ss_pred ecCCEEEEEEe-cCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEe
Confidence 99999999999 567899999973 45789999999999999999999999 9999999999999965 899999
Q ss_pred ccCCCccCCCCCcc-ccccccccccccCcccccc-----------CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchh
Q 005001 558 DCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALS-----------GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQ 625 (720)
Q Consensus 558 Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~ 625 (720)
|||++......... ......||+.|+|||.+.+ ..++.++||||||+++|||++|+.||......
T Consensus 169 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--- 245 (313)
T 3cek_A 169 DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ--- 245 (313)
T ss_dssp CCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH---
T ss_pred eccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH---
Confidence 99999866433221 2234579999999999876 46889999999999999999999999754321
Q ss_pred hHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 005001 626 SLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQAL 686 (720)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L 686 (720)
........+......++...+..+.+++.+||+.||++||++.|++++-
T Consensus 246 ------------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 246 ------------ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp ------------HHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred ------------HHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 1222333344444444555567899999999999999999999999863
No 187
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=7e-40 Score=347.98 Aligned_cols=252 Identities=21% Similarity=0.356 Sum_probs=211.0
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
..++|...+.||+|+||.||+|.+. +++.||+|++..... .......+.+|+.+++.++||||+++++++.+.+..++
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 3467889999999999999999876 578999999865433 34456778899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
||||+++++|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 119 v~e~~~~~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 191 (335)
T 2owb_A 119 VLELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 191 (335)
T ss_dssp EECCCTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEecCCCCCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceec
Confidence 9999999999998863 36789999999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......... ..+.
T Consensus 192 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~----------------~~~~ 254 (335)
T 2owb_A 192 EYDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY----------------LRIK 254 (335)
T ss_dssp CSTTC-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH----------------HHHH
T ss_pred ccCcc-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHH----------------HHHh
Confidence 43222 223457999999999999999999999999999999999999999754321111 1111
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.. ....+...+..+.+++.+||+.||++||++.|++++
T Consensus 255 ~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 255 KN--EYSIPKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp HT--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cC--CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11 112344556778999999999999999999999976
No 188
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.3e-40 Score=354.24 Aligned_cols=267 Identities=19% Similarity=0.244 Sum_probs=208.9
Q ss_pred hcCCCccceeccCCCcEEEEEEEcC---------CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccc-------
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFAN---------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVT------- 472 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~------- 472 (720)
.++|+..+.||+|+||.||+|.+.. ++.||+|.+... ..+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~ 113 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLYS 113 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHTT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhcc
Confidence 3678999999999999999998764 789999998643 35778899999999999887
Q ss_pred --------cceEEee-cCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCC
Q 005001 473 --------LAGYCAE-HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKS 543 (720)
Q Consensus 473 --------l~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp 543 (720)
+++++.. .+..++||||+ +++|.+++... ....+++.++..++.|++.||+|||+. +|+||||||
T Consensus 114 ~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp 187 (352)
T 2jii_A 114 TPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS--PKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTA 187 (352)
T ss_dssp CTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCG
T ss_pred CCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC--CcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCH
Confidence 5677766 67889999999 99999999742 236799999999999999999999999 999999999
Q ss_pred CCEEeCCCC--ceEEcccCCCccCCCCCcc------ccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCC
Q 005001 544 ANILLDDEL--NPHLSDCGLAALTPNTERQ------VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKP 615 (720)
Q Consensus 544 ~NIll~~~~--~~kl~Dfg~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~p 615 (720)
+||+++.++ .+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 188 ~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p 267 (352)
T 2jii_A 188 ENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLP 267 (352)
T ss_dssp GGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCT
T ss_pred HHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 999999998 8999999999765432211 12335799999999999999999999999999999999999999
Q ss_pred CCCCCCcchhhHHHhhccccccHHHHHhhcccccC-CCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhc
Q 005001 616 LDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALN-GMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRAS 694 (720)
Q Consensus 616 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 694 (720)
|.......... ... ............. .......+..+.+++.+||+.||++||+++++++.|+++.++..
T Consensus 268 f~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 268 WTNCLPNTEDI-MKQ-------KQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp TGGGTTCHHHH-HHH-------HHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred cccCCcCHHHH-HHH-------HHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 97654221110 000 0000000000000 00112346789999999999999999999999999999988775
Q ss_pred cc
Q 005001 695 VV 696 (720)
Q Consensus 695 ~~ 696 (720)
..
T Consensus 340 ~~ 341 (352)
T 2jii_A 340 VS 341 (352)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 189
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.6e-40 Score=349.53 Aligned_cols=267 Identities=22% Similarity=0.315 Sum_probs=198.3
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
++|...+.||+|+||.||+|... +++.||+|++..... ......+.+|+.++++++||||+++++++...+..++|||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 80 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc-cccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence 47889999999999999999876 689999999864431 1112245578999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|++ |+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 153 (324)
T 3mtl_A 81 YLD-KDLKQYLDD---CGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIP 153 (324)
T ss_dssp CCS-EEHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred ccc-cCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence 997 489988863 345789999999999999999999999 9999999999999999999999999999765432
Q ss_pred CccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHh-h-cc------ccccHH
Q 005001 569 ERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRW-A-TP------QLHDID 639 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~-~-~~------~~~~~~ 639 (720)
. .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+.. . .+ ......
T Consensus 154 ~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 232 (324)
T 3mtl_A 154 T-KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNE 232 (324)
T ss_dssp ----------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCH
T ss_pred c-cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcch
Confidence 2 22234578999999999987 5689999999999999999999999987554322221110 0 00 000001
Q ss_pred HHHhhcccccCCC----CChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 640 ALAKMVDPALNGM----YPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 640 ~~~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.......+..... .....+.++.+|+.+||+.||++|||++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 233 EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp HHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 1111111110000 012345678899999999999999999999975
No 190
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=8e-40 Score=339.07 Aligned_cols=248 Identities=26% Similarity=0.397 Sum_probs=207.9
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccC-hHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 487 (720)
++|+..+.||+|+||.||+|... +++.||+|++...... ......+.+|+.++++++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 56888999999999999999876 5788999998654321 123467889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 94 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (284)
T 2vgo_A 94 EFAPRGELYKELQK----HGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166 (284)
T ss_dssp CCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred EeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence 99999999999973 35689999999999999999999999 999999999999999999999999999876543
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhccc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDP 647 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (720)
.. .....||+.|+|||++.+..++.++||||||+++|||++|..||........ ...+...
T Consensus 167 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----------------~~~~~~~ 227 (284)
T 2vgo_A 167 LR---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET----------------HRRIVNV 227 (284)
T ss_dssp SC---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH----------------HHHHHTT
T ss_pred cc---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHH----------------HHHHhcc
Confidence 22 2345799999999999999999999999999999999999999975432111 1111111
Q ss_pred ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 648 ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 648 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
...++...+..+.+++.+||+.||++||++.+++++
T Consensus 228 --~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 228 --DLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp --CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred --ccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 122445566788999999999999999999999976
No 191
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=350.38 Aligned_cols=267 Identities=21% Similarity=0.310 Sum_probs=206.5
Q ss_pred hhcHHHHhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecC
Q 005001 402 VASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG 481 (720)
Q Consensus 402 ~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 481 (720)
........++|+..+.||+|+||.||+|.+.+ .||+|++..........+.+.+|+.++++++||||+++++++...+
T Consensus 25 ~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 102 (319)
T 2y4i_B 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP 102 (319)
T ss_dssp GGGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS
T ss_pred cccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC
Confidence 33444556789999999999999999998754 4899998765444444456778999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCC
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 561 (720)
..++||||+++++|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++ ++.+||+|||+
T Consensus 103 ~~~iv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~ 175 (319)
T 2y4i_B 103 HLAIITSLCKGRTLYSVVRD---AKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGL 175 (319)
T ss_dssp CEEEECBCCCSEEHHHHTTS---SCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSC
T ss_pred ceEEEeecccCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCC
Confidence 99999999999999999963 345789999999999999999999999 999999999999998 67999999999
Q ss_pred CccCCCCC----ccccccccccccccCcccccc---------CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHH
Q 005001 562 AALTPNTE----RQVSTQMVGAFGYSAPEFALS---------GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLV 628 (720)
Q Consensus 562 a~~~~~~~----~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~ 628 (720)
+....... ........||+.|+|||++.+ ..++.++||||||+++|||++|+.||.........
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~--- 252 (319)
T 2y4i_B 176 FSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAII--- 252 (319)
T ss_dssp CC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHH---
T ss_pred ccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---
Confidence 87543211 111233469999999999875 45789999999999999999999999754321111
Q ss_pred HhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 629 RWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
..+.........+...+..+.+++.+||+.||++||++.++++.|+++.++.
T Consensus 253 -------------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 253 -------------WQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp -------------HHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred -------------HHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 1111111111112234567889999999999999999999999998887654
No 192
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.2e-39 Score=340.38 Aligned_cols=269 Identities=23% Similarity=0.335 Sum_probs=202.9
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
++|+..+.||+|+||.||+|... +|+.||+|++............+.+|+.++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57888999999999999999876 68999999997654333445678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 568 (720)
|+. ++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 83 ~~~-~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 156 (299)
T 2r3i_A 83 FLH-QDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156 (299)
T ss_dssp CCS-EEHHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred ccc-CCHHHHHHhh--hccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCC
Confidence 997 5999998742 235689999999999999999999999 9999999999999999999999999998765432
Q ss_pred CccccccccccccccCccccccCC-CcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHH-Hh-hccccccHHHHHhh-
Q 005001 569 ERQVSTQMVGAFGYSAPEFALSGI-YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLV-RW-ATPQLHDIDALAKM- 644 (720)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~- 644 (720)
.. ......||+.|+|||.+.+.. ++.++||||||+++|||++|+.||...........+ .. ..+...........
T Consensus 157 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (299)
T 2r3i_A 157 VR-TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235 (299)
T ss_dssp SB-CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred cc-ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCc
Confidence 22 223356899999999998765 799999999999999999999999865432211111 10 00000000000000
Q ss_pred -cccccCCC-------CChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 645 -VDPALNGM-------YPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 645 -~~~~~~~~-------~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
........ .....+.++.+++.+||+.||++||++.|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000000 011245678999999999999999999999864
No 193
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=5.9e-40 Score=366.50 Aligned_cols=252 Identities=25% Similarity=0.382 Sum_probs=209.3
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccC-hHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
..++|+..+.||+|+||.||+|... +|+.||+|++...... ......+.+|+.++++++||||+++++++...+..++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 4567899999999999999999876 7899999998654332 3446778999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEe---CCCCceEEcccCCC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL---DDELNPHLSDCGLA 562 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll---~~~~~~kl~Dfg~a 562 (720)
||||+.+|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||++
T Consensus 104 v~e~~~~~~L~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 176 (484)
T 3nyv_A 104 VGEVYTGGELFDEII----SRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS 176 (484)
T ss_dssp EECCCCSCBHHHHHH----TCSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHH
T ss_pred EEecCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeee
Confidence 999999999999886 356799999999999999999999999 99999999999999 56789999999999
Q ss_pred ccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 563 ALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
....... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||........ +.
T Consensus 177 ~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----------------~~ 237 (484)
T 3nyv_A 177 THFEASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDI----------------LK 237 (484)
T ss_dssp HHBCCCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----------------HH
T ss_pred EEccccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHH----------------HH
Confidence 8664432 2234579999999999876 689999999999999999999999986543211 11
Q ss_pred hhcccccCCC--CChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 643 KMVDPALNGM--YPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 643 ~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
++........ .....+..+.+|+.+||+.||++|||+.|++++
T Consensus 238 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 238 KVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp HHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 1111111111 113456788999999999999999999999976
No 194
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=6.8e-40 Score=339.31 Aligned_cols=254 Identities=22% Similarity=0.330 Sum_probs=204.5
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccCh----HHHHHHHHHHHHhhcCCCCCccccceEEeecCeE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL----QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (720)
.++|+..+.||+|+||.||+|... +++.||+|.+....... ...+.+.+|+.++++++||||+++++++...+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 356889999999999999999876 68999999987543321 1357789999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCC----ceEEccc
Q 005001 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL----NPHLSDC 559 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~----~~kl~Df 559 (720)
++||||+++++|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++ .+||+||
T Consensus 84 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~df 156 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDF 156 (283)
T ss_dssp EEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEeecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEec
Confidence 999999999999999963 35789999999999999999999999 999999999999998877 8999999
Q ss_pred CCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHH
Q 005001 560 GLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDID 639 (720)
Q Consensus 560 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 639 (720)
|++....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...........+...
T Consensus 157 g~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-------- 226 (283)
T 3bhy_A 157 GIAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV-------- 226 (283)
T ss_dssp TTCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT--------
T ss_pred ccceeccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhc--------
Confidence 9998654322 223456999999999999999999999999999999999999999764322111111000
Q ss_pred HHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 640 ALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
............+..+.+++.+||+.||++||++.+++++
T Consensus 227 ------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 227 ------NYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp ------CCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred ------ccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 0000000012345678899999999999999999999985
No 195
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.8e-40 Score=355.25 Aligned_cols=271 Identities=24% Similarity=0.330 Sum_probs=205.9
Q ss_pred HHHhcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec----
Q 005001 406 QTATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH---- 480 (720)
Q Consensus 406 ~~~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~---- 480 (720)
+...++|+..+.||+|+||.||+|.+ .+|+.||+|++..... ...+|+++++.++||||+++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 76 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEE 76 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHTTCCCTTBCCEEEEEEEC----
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc------hHHHHHHHHHHcCCCCccchhheeeecCccc
Confidence 44567899999999999999999976 5789999999864422 123789999999999999999998443
Q ss_pred ----------------------------------CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHH
Q 005001 481 ----------------------------------GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALE 526 (720)
Q Consensus 481 ----------------------------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~ 526 (720)
...++||||++ |+|.+.+.........+++..+..++.|++.||+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp ---------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 34889999998 4888888765556788999999999999999999
Q ss_pred HHHhcCCCCcEEecCCCCCEEeC-CCCceEEcccCCCccCCCCCccccccccccccccCccccccCC-CcccchhhhHHH
Q 005001 527 YLHEVCLPSVVHRNFKSANILLD-DELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGI-YTVKSDVYSFGV 604 (720)
Q Consensus 527 ~LH~~~~~~iiH~Dlkp~NIll~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv 604 (720)
|||+. +|+||||||+||+++ .++.+||+|||+++...... ......||+.|+|||++.+.. ++.++||||+||
T Consensus 156 ~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~ 230 (383)
T 3eb0_A 156 FIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGC 230 (383)
T ss_dssp HHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHH
T ss_pred HHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHH
Confidence 99999 999999999999997 68899999999998664432 223457899999999988754 899999999999
Q ss_pred HHHHHHhCCCCCCCCCCcchhhHH-Hh-hccccccHHHHHhhcc------------cccCCCCChhHHHHHHHHHHHhcC
Q 005001 605 VMLELLTGRKPLDSSRPRSEQSLV-RW-ATPQLHDIDALAKMVD------------PALNGMYPAKSLSRFADIIALCVQ 670 (720)
Q Consensus 605 ~l~elltg~~pf~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~l~~li~~cl~ 670 (720)
++|||++|+.||.+.........+ .. ..+.. +.+..+-. ......++...+..+.+|+.+||+
T Consensus 231 il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 307 (383)
T 3eb0_A 231 VFGELILGKPLFSGETSIDQLVRIIQIMGTPTK---EQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILR 307 (383)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCH---HHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCC
T ss_pred HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH---HHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHcc
Confidence 999999999999875543222111 11 11111 11111100 000111234456779999999999
Q ss_pred CCCCCCCCHHHHHHH--HHHHHH
Q 005001 671 PEPEFRPPMSEVVQA--LVRLVQ 691 (720)
Q Consensus 671 ~dP~~RPs~~ell~~--L~~~~~ 691 (720)
.||++|||+.|++++ +.++..
T Consensus 308 ~dP~~R~t~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 308 YEPDLRINPYEAMAHPFFDHLRN 330 (383)
T ss_dssp SSGGGSCCHHHHHTSGGGHHHHH
T ss_pred CChhhCCCHHHHhcCHHHHHHHh
Confidence 999999999999965 444433
No 196
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.4e-39 Score=374.32 Aligned_cols=263 Identities=23% Similarity=0.367 Sum_probs=212.8
Q ss_pred HHHhcCCCccceeccCCCcEEEEEEEcC----CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecC
Q 005001 406 QTATNSFSQEFLIGEGSLGRVYRAEFAN----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG 481 (720)
Q Consensus 406 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 481 (720)
....++|+..+.||+|+||.||+|.+.. +..||+|++.... .......+.+|+.++++++||||+++++++. .+
T Consensus 386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~ 463 (656)
T 2j0j_A 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-EN 463 (656)
T ss_dssp BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SS
T ss_pred ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cC
Confidence 3345778999999999999999997742 4679999986533 3445678999999999999999999999985 46
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCC
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 561 (720)
..++||||+++|+|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 464 ~~~lv~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~ 537 (656)
T 2j0j_A 464 PVWIIMELCTLGELRSFLQV---RKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGL 537 (656)
T ss_dssp SCEEEEECCTTCBHHHHHHH---TTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCC
T ss_pred ceEEEEEcCCCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCC
Confidence 78999999999999999973 245689999999999999999999999 999999999999999999999999999
Q ss_pred CccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccccHHH
Q 005001 562 AALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLHDIDA 640 (720)
Q Consensus 562 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 640 (720)
++..............+|+.|+|||++.+..++.++|||||||++|||++ |..||........
T Consensus 538 a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~---------------- 601 (656)
T 2j0j_A 538 SRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV---------------- 601 (656)
T ss_dssp CCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH----------------
T ss_pred CeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHH----------------
Confidence 98765443333344567889999999999999999999999999999997 9999976432211
Q ss_pred HHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 641 LAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
...+. .......+..++..+.+++.+||+.||++||++.++++.|+++++..
T Consensus 602 ~~~i~-~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 602 IGRIE-NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp HHHHH-HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHH-cCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 11111 11122345567788999999999999999999999999999987653
No 197
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=9.6e-40 Score=343.93 Aligned_cols=265 Identities=21% Similarity=0.291 Sum_probs=199.5
Q ss_pred hcCCCcc-ceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEE
Q 005001 409 TNSFSQE-FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 409 ~~~y~~~-~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 485 (720)
.+.|++. +.||+|+||.||+|... +++.||+|++.... ......+.+|++++.++ +||||+++++++.+.+..++
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~l 88 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP--GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYL 88 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS--SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc--chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence 3567774 78999999999999764 68999999996543 23456788999999885 79999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCc---eEEcccCCC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN---PHLSDCGLA 562 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~---~kl~Dfg~a 562 (720)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++
T Consensus 89 v~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~ 161 (316)
T 2ac3_A 89 VFEKMRGGSILSHIHK----RRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLG 161 (316)
T ss_dssp EEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCC
T ss_pred EEEcCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCc
Confidence 9999999999999973 35789999999999999999999999 9999999999999998776 999999998
Q ss_pred ccCCCCCc------cccccccccccccCcccccc-----CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhh
Q 005001 563 ALTPNTER------QVSTQMVGAFGYSAPEFALS-----GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWA 631 (720)
Q Consensus 563 ~~~~~~~~------~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~ 631 (720)
........ .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...............
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 241 (316)
T 2ac3_A 162 SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEA 241 (316)
T ss_dssp C-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----C
T ss_pred cccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccccccccc
Confidence 76532211 11123469999999999975 55889999999999999999999999865432211000000
Q ss_pred ccccccHHHHHhhcccccCCCCCh----hHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 632 TPQLHDIDALAKMVDPALNGMYPA----KSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.+ .........+..... .++. ..+..+.+|+.+||+.||++||++.|++++
T Consensus 242 ~~-~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 242 CP-ACQNMLFESIQEGKY--EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp CH-HHHHHHHHHHHHCCC--CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ch-hHHHHHHHHHhccCc--ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 00 000001111111111 1221 245678999999999999999999999875
No 198
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2.3e-39 Score=348.94 Aligned_cols=265 Identities=21% Similarity=0.268 Sum_probs=198.1
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecC------
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG------ 481 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 481 (720)
.++|+..+.||+|+||.||+|... +++.||+|++............+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 467999999999999999999765 6889999999765555566778899999999999999999999987654
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCC
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 561 (720)
..++||||+++ +|.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 104 ~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp EEEEEEECCSE-EHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred ceEEEEEcCCC-CHHHHHh------hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeec
Confidence 78999999975 7888885 4589999999999999999999999 999999999999999999999999999
Q ss_pred CccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhh--cc------
Q 005001 562 AALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWA--TP------ 633 (720)
Q Consensus 562 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~--~~------ 633 (720)
++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.........+.-. .+
T Consensus 174 a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 251 (371)
T 2xrw_A 174 ARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 251 (371)
T ss_dssp ------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHT
T ss_pred ccccccc--cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 9765432 1223467999999999999999999999999999999999999999875432211111000 00
Q ss_pred cccc-HHH------------HHhhcccccCCC---CChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 634 QLHD-IDA------------LAKMVDPALNGM---YPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 634 ~~~~-~~~------------~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.... ... ..+......... .+...+..+.+|+.+||+.||++|||++|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 252 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp TSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 0000 000 000000000000 011236789999999999999999999999986
No 199
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.6e-39 Score=340.30 Aligned_cols=250 Identities=23% Similarity=0.369 Sum_probs=205.3
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
..++|...+.||+|+||.||+|... +|+.||+|.+.... ......+.+|+.++++++||||+++++++...+..++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP--AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLV 84 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc--ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEE
Confidence 3467889999999999999999875 68999999997543 22345688999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEe---CCCCceEEcccCCCc
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL---DDELNPHLSDCGLAA 563 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll---~~~~~~kl~Dfg~a~ 563 (720)
|||+++++|.+++.. .+.+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++.
T Consensus 85 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~ 157 (304)
T 2jam_A 85 MQLVSGGELFDRILE----RGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSK 157 (304)
T ss_dssp ECCCCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTC
T ss_pred EEcCCCccHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcce
Confidence 999999999999863 35789999999999999999999999 99999999999999 788999999999987
Q ss_pred cCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHh
Q 005001 564 LTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAK 643 (720)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (720)
..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||........ ...
T Consensus 158 ~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----------------~~~ 218 (304)
T 2jam_A 158 MEQNG---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKL----------------FEK 218 (304)
T ss_dssp CCCCB---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----------------HHH
T ss_pred ecCCC---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH----------------HHH
Confidence 54332 22335699999999999999999999999999999999999999975432111 111
Q ss_pred hcccc--cCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 644 MVDPA--LNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 644 ~~~~~--~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+.... .........+..+.+++.+||+.||++||++.|++++
T Consensus 219 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 219 IKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp HHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred HHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11111 1112234566789999999999999999999999975
No 200
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.4e-39 Score=335.73 Aligned_cols=250 Identities=25% Similarity=0.402 Sum_probs=199.8
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
.++|.+.+.||+|+||.||+|.+. +|+.||+|.+..... .......+.+|+.+++.++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 467889999999999999999876 789999999865432 122356788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 90 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 162 (276)
T 2h6d_A 90 MEYVSGGELFDYICK----HGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162 (276)
T ss_dssp EECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCC
T ss_pred EeccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccC
Confidence 999999999999973 35689999999999999999999999 99999999999999999999999999997664
Q ss_pred CCCccccccccccccccCccccccCCC-cccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSGIY-TVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
... ......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||......... ..+.
T Consensus 163 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~----------------~~~~ 224 (276)
T 2h6d_A 163 DGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLF----------------KKIR 224 (276)
T ss_dssp C---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----------------HHHH
T ss_pred CCc--ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHH----------------HHhh
Confidence 322 2234578999999999988775 68999999999999999999999754321111 1111
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.. ....+...+..+.+++.+||+.||++||++.|++++
T Consensus 225 ~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 225 GG--VFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp HC--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred cC--cccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 11 112344556788999999999999999999999986
No 201
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=9.9e-40 Score=376.75 Aligned_cols=252 Identities=20% Similarity=0.306 Sum_probs=210.0
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRL 484 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 484 (720)
..++|+..+.||+|+||.||+|.+. +++.||||+++.... .......+..|..++..+ +||||+.+++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 3467999999999999999999875 588999999975432 223345677888988887 7999999999999999999
Q ss_pred EEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 485 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
+||||+++|+|.++++. .+.+++..++.++.||+.||+|||+. +||||||||+|||++.++.+||+|||+++.
T Consensus 419 lV~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~ 491 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 491 (674)
T ss_dssp EEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred EEEeCcCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeec
Confidence 99999999999999973 35799999999999999999999999 999999999999999999999999999986
Q ss_pred CCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhh
Q 005001 565 TPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKM 644 (720)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (720)
..... ......+||+.|+|||++.+..|+.++|||||||++|||++|+.||...... +...++
T Consensus 492 ~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~----------------~~~~~i 554 (674)
T 3pfq_A 492 NIWDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED----------------ELFQSI 554 (674)
T ss_dssp CCCTT-CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH----------------HHHHHH
T ss_pred cccCC-cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH----------------HHHHHH
Confidence 43322 2334578999999999999999999999999999999999999999764321 112222
Q ss_pred cccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHH
Q 005001 645 VDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPM-----SEVVQA 685 (720)
Q Consensus 645 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~ell~~ 685 (720)
.... ..+|...+.++.+||++||+.||++||++ +||+++
T Consensus 555 ~~~~--~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 555 MEHN--VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp HSSC--CCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred HhCC--CCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 2222 23556677889999999999999999998 666654
No 202
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.1e-40 Score=360.15 Aligned_cols=253 Identities=15% Similarity=0.184 Sum_probs=195.9
Q ss_pred HhcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEcccccc-ChHHHHHHHHHH---HHhhcCCCCCccccc-------e
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAAL-SLQEEDNFLEAV---SNMSRLRHPNIVTLA-------G 475 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~---~~l~~l~h~niv~l~-------~ 475 (720)
..++|...+.||+|+||.||+|.+ .+|+.||||++..... .....+.+.+|+ +.+++++||||++++ +
T Consensus 71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~ 150 (377)
T 3byv_A 71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 150 (377)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence 456788999999999999999986 4699999999975422 334567788999 556666899999998 6
Q ss_pred EEeecC-----------------eEEEEEEecCCCCHHHHhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 005001 476 YCAEHG-----------------QRLLVYEYVGNGNLHDMLHFADDS---SKNLTWNARVRVALGTARALEYLHEVCLPS 535 (720)
Q Consensus 476 ~~~~~~-----------------~~~lV~e~~~~gsL~~~l~~~~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ 535 (720)
++...+ ..++||||+ +|+|.++++..... ...+++..+..++.||+.||+|||+. +
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 226 (377)
T 3byv_A 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G 226 (377)
T ss_dssp EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---C
Confidence 655543 278999999 57999999743211 12344688889999999999999999 9
Q ss_pred cEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccccccccccccccCccccccC-----------CCcccchhhhHHH
Q 005001 536 VVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSG-----------IYTVKSDVYSFGV 604 (720)
Q Consensus 536 iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwSlGv 604 (720)
|+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||
T Consensus 227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~ 301 (377)
T 3byv_A 227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL 301 (377)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred eecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence 99999999999999999999999999985332 2334567 999999999988 8999999999999
Q ss_pred HHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 005001 605 VMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQ 684 (720)
Q Consensus 605 ~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~ 684 (720)
++|||++|+.||.......... .... .....+..+.++|.+||+.||++||++.|+++
T Consensus 302 il~elltg~~Pf~~~~~~~~~~----------------~~~~------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 302 VIYWIWCADLPITKDAALGGSE----------------WIFR------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHHSSCCC------CCSG----------------GGGS------SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHHHCCCCCcccccccchh----------------hhhh------hccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 9999999999997543221110 0000 11234567889999999999999999999996
Q ss_pred H--HHHHHH
Q 005001 685 A--LVRLVQ 691 (720)
Q Consensus 685 ~--L~~~~~ 691 (720)
+ +.++.+
T Consensus 360 hp~f~~~~~ 368 (377)
T 3byv_A 360 TPEYEQLRT 368 (377)
T ss_dssp SHHHHHHHH
T ss_pred ChHHHHHHH
Confidence 4 444433
No 203
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-39 Score=346.71 Aligned_cols=271 Identities=25% Similarity=0.335 Sum_probs=200.2
Q ss_pred HHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChH---HHHHHHHHHHHhhcCCCCCccccceEEeecCe
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQ---EEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (720)
...++|+..+.||+|+||.||+|.+. +|+.||+|++........ ....+.+|+.+++.++||||+++++++...+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999875 589999999975432211 12467899999999999999999999999999
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCC
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a 562 (720)
.++||||+++ +|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 87 ~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKD---NSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLA 159 (346)
T ss_dssp CEEEEECCSE-EHHHHHTT---CCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGG
T ss_pred eEEEEEcCCC-CHHHHHHh---cCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccc
Confidence 9999999986 88888862 345688999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCccccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHH-Hh-hccc---cc
Q 005001 563 ALTPNTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLV-RW-ATPQ---LH 636 (720)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~-~~-~~~~---~~ 636 (720)
+....... ......||+.|+|||++.+. .++.++|||||||++|||++|..||...........+ .. ..+. +.
T Consensus 160 ~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 238 (346)
T 1ua2_A 160 KSFGSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 238 (346)
T ss_dssp STTTSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSS
T ss_pred eeccCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhh
Confidence 87643322 23345799999999999764 4899999999999999999999999765432221111 10 0000 00
Q ss_pred cHHHHHhhcccccCCCCC-----hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 637 DIDALAKMVDPALNGMYP-----AKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.................+ ...+..+.+|+.+||+.||++|||+.|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 239 DMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp STTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000000000000000011 2345789999999999999999999999976
No 204
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=345.04 Aligned_cols=261 Identities=25% Similarity=0.425 Sum_probs=202.5
Q ss_pred cchhcHHHHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEE
Q 005001 400 YTVASLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYC 477 (720)
Q Consensus 400 ~~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 477 (720)
+....+....++|+..+.||+|+||.||+|.+. +++.||+|++.... .....+.+|+.+++++ +||||+++++++
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 90 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAF 90 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---STTHHHHHHHHHHHHHCCSTTBCCEEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc---ccHHHHHHHHHHHHhccCCCCeeeeeeEE
Confidence 344455667788999999999999999999874 68999999986433 2346788999999988 899999999999
Q ss_pred ee------cCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCC
Q 005001 478 AE------HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE 551 (720)
Q Consensus 478 ~~------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~ 551 (720)
.. .+..++||||+++|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 91 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~ 165 (326)
T 2x7f_A 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT--KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTEN 165 (326)
T ss_dssp EECC--CCCCEEEEEEECCTTEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTT
T ss_pred eeccCccccceEEEEEEcCCCCcHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCC
Confidence 76 46889999999999999999743 235789999999999999999999999 99999999999999999
Q ss_pred CceEEcccCCCccCCCCCccccccccccccccCccccc-----cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhh
Q 005001 552 LNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFAL-----SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQS 626 (720)
Q Consensus 552 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~ 626 (720)
+.+||+|||++....... .......||+.|+|||++. +..++.++|||||||++|||++|+.||.........
T Consensus 166 ~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~- 243 (326)
T 2x7f_A 166 AEVKLVDFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL- 243 (326)
T ss_dssp CCEEECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-
T ss_pred CCEEEeeCcCceecCcCc-cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHH-
Confidence 999999999987654322 1223457999999999997 566899999999999999999999999754321111
Q ss_pred HHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 627 LVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
............+...+..+.+++.+||+.||++||++.+++++
T Consensus 244 ---------------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 244 ---------------FLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp ---------------HHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ---------------HHhhcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 01111111111233456788999999999999999999999874
No 205
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2e-39 Score=346.35 Aligned_cols=271 Identities=17% Similarity=0.264 Sum_probs=207.5
Q ss_pred HhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChH---------------HHHHHHHHHHHhhcCCCCCccc
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQ---------------EEDNFLEAVSNMSRLRHPNIVT 472 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~---------------~~~~~~~e~~~l~~l~h~niv~ 472 (720)
..++|+..+.||+|+||.||+|.. +++.||+|++........ ....+.+|+.++++++||||++
T Consensus 29 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~ 107 (348)
T 2pml_X 29 YINDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT 107 (348)
T ss_dssp EETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred ccCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence 346899999999999999999988 899999999865432211 1177899999999999999999
Q ss_pred cceEEeecCeEEEEEEecCCCCHHHHhhh----ccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEEecCCCCCEE
Q 005001 473 LAGYCAEHGQRLLVYEYVGNGNLHDMLHF----ADDSSKNLTWNARVRVALGTARALEYLHE-VCLPSVVHRNFKSANIL 547 (720)
Q Consensus 473 l~~~~~~~~~~~lV~e~~~~gsL~~~l~~----~~~~~~~~~~~~~~~i~~qi~~~L~~LH~-~~~~~iiH~Dlkp~NIl 547 (720)
+++++...+..++||||+++|+|.+++.. .......+++..+..++.|++.||+|||+ . +|+||||||+||+
T Consensus 108 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil 184 (348)
T 2pml_X 108 CEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNIL 184 (348)
T ss_dssp CSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEE
T ss_pred EEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEE
Confidence 99999999999999999999999998321 11225789999999999999999999999 8 9999999999999
Q ss_pred eCCCCceEEcccCCCccCCCCCccccccccccccccCccccccC-CCcc-cchhhhHHHHHHHHHhCCCCCCCCCCcch-
Q 005001 548 LDDELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSG-IYTV-KSDVYSFGVVMLELLTGRKPLDSSRPRSE- 624 (720)
Q Consensus 548 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DvwSlGv~l~elltg~~pf~~~~~~~~- 624 (720)
++.++.+||+|||++...... ......||+.|+|||++.+. .++. ++||||||+++|||++|+.||........
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~ 261 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVEL 261 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHH
T ss_pred EcCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH
Confidence 999999999999999865432 23446799999999999887 6766 99999999999999999999986544211
Q ss_pred hhHHHhhccccccHH-HHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 625 QSLVRWATPQLHDID-ALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 625 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
...+........... ..................+..+.+++.+||+.||++||++.|++++
T Consensus 262 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 262 FNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111100000000000 0000000000000113456788999999999999999999999874
No 206
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=3.6e-39 Score=356.91 Aligned_cols=265 Identities=20% Similarity=0.285 Sum_probs=210.2
Q ss_pred hcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCC-CCccccceEEeecCeEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH-PNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lV 486 (720)
.++|++.+.||+|+||.||+|.+ .+++.||||++..... ...+.+|+++++.++| ++|..+..++...+..++|
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lv 81 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLV 81 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS----SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEE
Confidence 46799999999999999999986 5689999998764432 2347789999999977 5555666667778889999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEe---CCCCceEEcccCCCc
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL---DDELNPHLSDCGLAA 563 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll---~~~~~~kl~Dfg~a~ 563 (720)
|||+ +++|.++++.. ...+++.+++.++.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+++
T Consensus 82 me~~-g~sL~~ll~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (483)
T 3sv0_A 82 MDLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (483)
T ss_dssp EECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EECC-CCCHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcce
Confidence 9999 88999999742 46799999999999999999999999 99999999999999 588999999999998
Q ss_pred cCCCCCcc------ccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcccccc
Q 005001 564 LTPNTERQ------VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHD 637 (720)
Q Consensus 564 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 637 (720)
........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~----- 229 (483)
T 3sv0_A 155 KYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKIS----- 229 (483)
T ss_dssp ECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHH-----
T ss_pred eccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHh-----
Confidence 76543321 1225679999999999999999999999999999999999999998765533322221100
Q ss_pred HHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhc
Q 005001 638 IDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRAS 694 (720)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~~ 694 (720)
........ ...+..++.++.+++.+||+.||++||++.+|++.|+++..+..
T Consensus 230 ----~~~~~~~~-~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~ 281 (483)
T 3sv0_A 230 ----EKKVATSI-EALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREG 281 (483)
T ss_dssp ----HHHHHSCH-HHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred ----hccccccH-HHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcC
Confidence 00000000 00012345678999999999999999999999999999987654
No 207
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2.3e-39 Score=363.28 Aligned_cols=253 Identities=23% Similarity=0.307 Sum_probs=204.0
Q ss_pred HHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccCh-----------HHHHHHHHHHHHhhcCCCCCccccc
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL-----------QEEDNFLEAVSNMSRLRHPNIVTLA 474 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~-----------~~~~~~~~e~~~l~~l~h~niv~l~ 474 (720)
...++|...+.||+|+||.||+|.+. +++.||+|++....... ...+.+.+|+.++++++||||++++
T Consensus 33 ~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~ 112 (504)
T 3q5i_A 33 KIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF 112 (504)
T ss_dssp CGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred CcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 45678999999999999999999875 57899999997544321 2356788999999999999999999
Q ss_pred eEEeecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCC--
Q 005001 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL-- 552 (720)
Q Consensus 475 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~-- 552 (720)
+++.+.+..++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++
T Consensus 113 ~~~~~~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~ 185 (504)
T 3q5i_A 113 DVFEDKKYFYLVTEFYEGGELFEQIIN----RHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSL 185 (504)
T ss_dssp EEEECSSEEEEEEECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCC
T ss_pred EEEEcCCEEEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCC
Confidence 999999999999999999999998863 36799999999999999999999999 999999999999998776
Q ss_pred -ceEEcccCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhh
Q 005001 553 -NPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWA 631 (720)
Q Consensus 553 -~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~ 631 (720)
.+||+|||++....... ......||+.|+|||++. +.++.++||||+||++|+|++|..||..........
T Consensus 186 ~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~----- 257 (504)
T 3q5i_A 186 LNIKIVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIK----- 257 (504)
T ss_dssp SSEEECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-----
T ss_pred ccEEEEECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH-----
Confidence 69999999998765432 233457999999999987 468999999999999999999999998654321111
Q ss_pred ccccccHHHHHhhcccccCCCC--ChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 632 TPQLHDIDALAKMVDPALNGMY--PAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.+......... ....+.++.+|+.+||+.||.+|||+.|++++
T Consensus 258 -----------~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 258 -----------KVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp -----------HHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -----------HHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 11111111000 02345678999999999999999999999976
No 208
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.9e-39 Score=348.40 Aligned_cols=263 Identities=21% Similarity=0.330 Sum_probs=190.2
Q ss_pred hcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec------C
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH------G 481 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 481 (720)
.++|+..+.||+|+||.||+|.+ .+|+.||||++............+.+|+.+++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 46899999999999999999976 4689999999976655566677889999999999999999999998654 5
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCC
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 561 (720)
..++|+|++ +++|.++++ .+.+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 108 ~~~lv~e~~-~~~L~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp CCEEEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC---
T ss_pred eEEEEeccc-CCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccc
Confidence 679999999 679999886 36799999999999999999999999 999999999999999999999999999
Q ss_pred CccCCCCCccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHH-h-hccc----
Q 005001 562 AALTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVR-W-ATPQ---- 634 (720)
Q Consensus 562 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~-~-~~~~---- 634 (720)
++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.........+. . ..+.
T Consensus 179 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~ 254 (367)
T 2fst_X 179 ARHTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 254 (367)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred ccccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 9765432 234679999999999987 678999999999999999999999998755332221111 0 0110
Q ss_pred --cccHHHHHhhcccccC-CCC-----ChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 635 --LHDIDALAKMVDPALN-GMY-----PAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 635 --~~~~~~~~~~~~~~~~-~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
... ......+..... ... ....+..+.+|+.+||+.||++|||+.|++++
T Consensus 255 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 255 KKISS-ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp TTCCC-HHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHhhh-HHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 000 001111100000 000 01235678899999999999999999999976
No 209
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.8e-39 Score=347.29 Aligned_cols=256 Identities=25% Similarity=0.365 Sum_probs=206.6
Q ss_pred HHHHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc--C----hHHHHHHHHHHHHhhcC-CCCCccccceE
Q 005001 405 LQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL--S----LQEEDNFLEAVSNMSRL-RHPNIVTLAGY 476 (720)
Q Consensus 405 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~ 476 (720)
.....++|...+.||+|+||.||+|.+. +|+.||||++..... . ......+.+|+.+++++ +||||++++++
T Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 168 (365)
T 2y7j_A 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS 168 (365)
T ss_dssp HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence 3445678999999999999999999885 799999999864431 1 12245678899999998 89999999999
Q ss_pred EeecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEE
Q 005001 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHL 556 (720)
Q Consensus 477 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl 556 (720)
+...+..++||||+++++|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+||+++.++.+||
T Consensus 169 ~~~~~~~~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl 241 (365)
T 2y7j_A 169 YESSSFMFLVFDLMRKGELFDYLTE----KVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRL 241 (365)
T ss_dssp EEBSSEEEEEECCCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEE
T ss_pred EeeCCEEEEEEEeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEE
Confidence 9999999999999999999999973 35789999999999999999999999 9999999999999999999999
Q ss_pred cccCCCccCCCCCccccccccccccccCcccccc------CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHh
Q 005001 557 SDCGLAALTPNTERQVSTQMVGAFGYSAPEFALS------GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRW 630 (720)
Q Consensus 557 ~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~ 630 (720)
+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..........
T Consensus 242 ~DfG~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~---- 315 (365)
T 2y7j_A 242 SDFGFSCHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLR---- 315 (365)
T ss_dssp CCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----
T ss_pred EecCcccccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHH----
Confidence 9999998765432 2234679999999999864 358899999999999999999999997543211111
Q ss_pred hccccccHHHHHhhcccccCCCCC--hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 631 ATPQLHDIDALAKMVDPALNGMYP--AKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.+.........+ ...+..+.+++.+||+.||++||++.|++++
T Consensus 316 ------------~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 316 ------------MIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp ------------HHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ------------HHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111111110000 1234678899999999999999999999874
No 210
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=6.2e-39 Score=334.14 Aligned_cols=254 Identities=22% Similarity=0.345 Sum_probs=202.2
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 488 (720)
++|....+||+|+||.||+|.+. +++.||+|.+.... ......+.+|+.+++.++||||+++++++...+..++|||
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 99 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD--SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFME 99 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC--C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc--hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEE
Confidence 34556669999999999999864 68899999986543 3345678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC-CCceEEcccCCCccCCC
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD-ELNPHLSDCGLAALTPN 567 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~ 567 (720)
|+++++|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||++.....
T Consensus 100 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~ 175 (295)
T 2clq_A 100 QVPGGSLSALLRSKW-GPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 175 (295)
T ss_dssp CCSEEEHHHHHHHTT-CCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC
T ss_pred eCCCCCHHHHHHhhc-cCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCC
Confidence 999999999997422 234567899999999999999999999 9999999999999987 89999999999976643
Q ss_pred CCccccccccccccccCccccccCC--CcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGI--YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
.. .......||+.|+|||++.+.. ++.++||||||+++|||++|+.||......... ..+..
T Consensus 176 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---------------~~~~~ 239 (295)
T 2clq_A 176 IN-PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAA---------------MFKVG 239 (295)
T ss_dssp ------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHH---------------HHHHH
T ss_pred CC-CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHH---------------HHhhc
Confidence 22 1223457999999999998754 789999999999999999999999643221110 00000
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
........+...+..+.+++.+||+.||++||++.+++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 240 MFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp HHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred cccccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0111223455667789999999999999999999999864
No 211
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.1e-39 Score=338.09 Aligned_cols=253 Identities=26% Similarity=0.455 Sum_probs=203.4
Q ss_pred HHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
...++|+..+.||+|+||.||+|.+. +|+.||+|.+.... ....+.+|+.+++.++||||+++++++...+..++
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 101 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence 34567999999999999999999876 58999999986532 24568899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
||||+++++|.+++.. ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 102 v~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 175 (314)
T 3com_A 102 VMEYCGAGSVSDIIRL---RNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQL 175 (314)
T ss_dssp EEECCTTEEHHHHHHH---HTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EeecCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhh
Confidence 9999999999999863 246789999999999999999999999 9999999999999999999999999999765
Q ss_pred CCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhc
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMV 645 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (720)
..... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||.......... ....
T Consensus 176 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-------------~~~~-- 239 (314)
T 3com_A 176 TDTMA-KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF-------------MIPT-- 239 (314)
T ss_dssp BTTBS-CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-------------HHHH--
T ss_pred hhhcc-ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHH-------------HHhc--
Confidence 43221 2234579999999999999999999999999999999999999997543211110 0001
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
........+...+..+.+++.+||+.||++||++.+++++
T Consensus 240 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 240 NPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp SCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0111112244456789999999999999999999999874
No 212
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1e-38 Score=343.01 Aligned_cols=267 Identities=22% Similarity=0.310 Sum_probs=205.7
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec-----Ce
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH-----GQ 482 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 482 (720)
.++|+..+.||+|+||.||+|.+. +++.||+|++.... .......+.+|++++++++||||+++++++... ..
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT-CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc-CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 457999999999999999999765 68889999997433 344557789999999999999999999998654 46
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCC
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a 562 (720)
.++||||+++ +|.++++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 105 ~~iv~e~~~~-~L~~~l~-----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 175 (364)
T 3qyz_A 105 VYIVQDLMET-DLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 175 (364)
T ss_dssp EEEEEECCSE-EHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEcccCc-CHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcce
Confidence 8999999974 9999886 35699999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCccc--cccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHh-h-cccc--
Q 005001 563 ALTPNTERQV--STQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRW-A-TPQL-- 635 (720)
Q Consensus 563 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~-~-~~~~-- 635 (720)
.......... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+.. . .+..
T Consensus 176 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 255 (364)
T 3qyz_A 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255 (364)
T ss_dssp EECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHH
T ss_pred EecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 8664332211 234579999999998765 4589999999999999999999999987654433222211 0 0000
Q ss_pred ----ccHHHHHhhcccccCCCC-----ChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 636 ----HDIDALAKMVDPALNGMY-----PAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 636 ----~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.................. ....+.++.+|+.+||+.||++|||+.|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000000000000011 12345678999999999999999999999976
No 213
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=3.6e-39 Score=350.00 Aligned_cols=265 Identities=23% Similarity=0.338 Sum_probs=200.0
Q ss_pred hcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCe------
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ------ 482 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------ 482 (720)
..+|...+.||+|+||.||+|.+..+..||+|++...... ..+|+++++.++||||+++++++...+.
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~------~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~ 112 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF------KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF 112 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS------CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch------HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence 4578999999999999999999987778999988643221 2368999999999999999999865443
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeC-CCCceEEcccCC
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD-DELNPHLSDCGL 561 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~-~~~~~kl~Dfg~ 561 (720)
.++||||+++ ++.+.+.........+++..+..++.|++.||+|||+. +|+||||||+|||++ .++.+||+|||+
T Consensus 113 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~ 188 (394)
T 4e7w_A 113 LNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGS 188 (394)
T ss_dssp EEEEEECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEEeeccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCC
Confidence 7899999987 45444443333467899999999999999999999999 999999999999999 799999999999
Q ss_pred CccCCCCCccccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhH-HHh-hccccccH
Q 005001 562 AALTPNTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSL-VRW-ATPQLHDI 638 (720)
Q Consensus 562 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~-~~~-~~~~~~~~ 638 (720)
++....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.+......... +.. ..+.....
T Consensus 189 a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~ 266 (394)
T 4e7w_A 189 AKILIAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQI 266 (394)
T ss_dssp CEECCTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred cccccCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 987643322 2346789999999999765 589999999999999999999999987553322211 111 11111111
Q ss_pred HHHHhh-ccccc--------CCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 639 DALAKM-VDPAL--------NGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 639 ~~~~~~-~~~~~--------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
...... ..... ...++...+.++.+|+.+||+.||++|||+.|++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 267 KTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 110000 00000 001122356789999999999999999999999975
No 214
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1e-39 Score=341.37 Aligned_cols=266 Identities=26% Similarity=0.412 Sum_probs=190.1
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
..++|+..+.||+|+||.||+|.+. +++.||+|++..... ......+.+|+.++++++||||+++++++...+..++|
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC-QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc-chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 4578999999999999999999764 688999999865432 23456788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCC
Q 005001 487 YEYVGNGNLHDMLHFADD----SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~----~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a 562 (720)
|||+++++|.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccch
Confidence 999999999999864221 245689999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCc----cccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhcccccc
Q 005001 563 ALTPNTER----QVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHD 637 (720)
Q Consensus 563 ~~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 637 (720)
........ .......||+.|+|||++.+ ..++.++||||||+++|||++|+.||................+. .
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~ 246 (303)
T 2vwi_A 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPP--S 246 (303)
T ss_dssp HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCC--C
T ss_pred heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCC--c
Confidence 76543221 11234579999999999976 56899999999999999999999999865433221111000000 0
Q ss_pred HHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 638 IDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.. ............+..+.+++.+||+.||++||++.+++++
T Consensus 247 ~~------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 247 LE------TGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp TT------C-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cc------cccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00 0000011123345678999999999999999999999874
No 215
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.2e-39 Score=350.10 Aligned_cols=276 Identities=22% Similarity=0.296 Sum_probs=205.0
Q ss_pred chhcHHHHhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEcccccc---------ChHHHHHHHHHHHHhhcCCCCCcc
Q 005001 401 TVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAAL---------SLQEEDNFLEAVSNMSRLRHPNIV 471 (720)
Q Consensus 401 ~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---------~~~~~~~~~~e~~~l~~l~h~niv 471 (720)
...++....++|...+.||+|+||.||+|.+.+|+.||+|++..... .....+.+.+|+.++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 35567788899999999999999999999988899999999865332 222347789999999999999999
Q ss_pred ccceEEee-----cCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCE
Q 005001 472 TLAGYCAE-----HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANI 546 (720)
Q Consensus 472 ~l~~~~~~-----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NI 546 (720)
++++++.. ....++||||++ |+|.+++. .....+++..+..++.|++.||+|||+. +|+||||||+||
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NI 165 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIH---DQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNI 165 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHH---CTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHH---hcccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHE
Confidence 99999854 336899999998 58888886 2345799999999999999999999999 999999999999
Q ss_pred EeCCCCceEEcccCCCccCCCCCccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchh
Q 005001 547 LLDDELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQ 625 (720)
Q Consensus 547 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~ 625 (720)
+++.++.+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.........
T Consensus 166 l~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~ 243 (362)
T 3pg1_A 166 LLADNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL 243 (362)
T ss_dssp EECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred EEcCCCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 99999999999999997543322 2334579999999999987 67899999999999999999999999875432222
Q ss_pred hHH-Hhh-cccccc-----HHHHHhhcccccCCC-------CChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 626 SLV-RWA-TPQLHD-----IDALAKMVDPALNGM-------YPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 626 ~~~-~~~-~~~~~~-----~~~~~~~~~~~~~~~-------~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
..+ ... .+.... ............... .+...+..+.+|+.+||+.||++|||+.|++++
T Consensus 244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 244 NKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 111 111 010000 000111111111100 112335678999999999999999999999976
No 216
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=334.06 Aligned_cols=253 Identities=23% Similarity=0.300 Sum_probs=202.9
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc--ChHHHHHHHHHHHHhhcCCCCCccccceEE--eecCeE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL--SLQEEDNFLEAVSNMSRLRHPNIVTLAGYC--AEHGQR 483 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~--~~~~~~ 483 (720)
.++|++.+.||+|+||.||+|.+. +++.||+|++..... .......+.+|+.++++++||||+++++++ .+.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 468999999999999999999874 688999999975432 123467789999999999999999999998 445688
Q ss_pred EEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
++||||++++ |.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 84 ~lv~e~~~~~-l~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSV--PEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp EEEEECCSEE-HHHHHHHS--TTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEehhccCC-HHHHHHhC--cccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccc
Confidence 9999999876 77777642 346799999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCC-ccccccccccccccCccccccCC--CcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHH
Q 005001 564 LTPNTE-RQVSTQMVGAFGYSAPEFALSGI--YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDA 640 (720)
Q Consensus 564 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 640 (720)
...... ........||+.|+|||++.+.. ++.++||||||+++|||++|+.||........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---------------- 221 (305)
T 2wtk_C 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKL---------------- 221 (305)
T ss_dssp ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----------------
T ss_pred ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHH----------------
Confidence 654322 22233457999999999998754 47899999999999999999999975432111
Q ss_pred HHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 641 LAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
...+... ....+..++..+.+++.+||+.||++||++.|++++
T Consensus 222 ~~~i~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 222 FENIGKG--SYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp HHHHHHC--CCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred HHHHhcC--CCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1111111 112344566788999999999999999999999986
No 217
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=4.2e-39 Score=352.31 Aligned_cols=260 Identities=24% Similarity=0.337 Sum_probs=199.6
Q ss_pred cCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec------Ce
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH------GQ 482 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~ 482 (720)
.+|+..+.||+|+||.||+|.+. +|+.||||++.... ..+.+|+++++.++||||+++++++... ..
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~ 127 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 127 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCccee
Confidence 46888999999999999999885 58999999986432 1234689999999999999999988542 23
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCC-CceEEcccCC
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE-LNPHLSDCGL 561 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~-~~~kl~Dfg~ 561 (720)
.++||||+++ +|.+.+.........+++..+..++.||+.||+|||+. +|+||||||+|||++.+ +.+||+|||+
T Consensus 128 ~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 128 LNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp EEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchh
Confidence 6799999986 77777765444567899999999999999999999999 99999999999999965 5789999999
Q ss_pred CccCCCCCccccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhh-HHHh-hccccccH
Q 005001 562 AALTPNTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQS-LVRW-ATPQLHDI 638 (720)
Q Consensus 562 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~-~~~~-~~~~~~~~ 638 (720)
++...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.+........ ++.. ..+. .
T Consensus 204 a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~---~ 278 (420)
T 1j1b_A 204 AKQLVRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT---R 278 (420)
T ss_dssp CEECCTTC--CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCC---H
T ss_pred hhhcccCC--CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC---H
Confidence 98654332 22346799999999999775 78999999999999999999999998754322211 1111 1111 1
Q ss_pred HHHHhhccccc-CCC------------CChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 639 DALAKMVDPAL-NGM------------YPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 639 ~~~~~~~~~~~-~~~------------~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+.+..+ .+.. ... ++...+.++.+|+.+||+.||++||++.|++++
T Consensus 279 ~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 279 EQIREM-NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHHHHH-CSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHhh-ChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 111111 1110 000 223446789999999999999999999999875
No 218
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=5.1e-39 Score=340.56 Aligned_cols=259 Identities=19% Similarity=0.301 Sum_probs=201.6
Q ss_pred cCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCC-CCCccccceEEee--cCeEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAE--HGQRLL 485 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~--~~~~~l 485 (720)
++|+..+.||+|+||.||+|.+ .+++.||+|++... ....+.+|+.++++++ ||||+++++++.. ....++
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~l 110 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL 110 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc-----chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEE
Confidence 6788999999999999999976 57899999998643 2467889999999996 9999999999987 667899
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCC-ceEEcccCCCcc
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL-NPHLSDCGLAAL 564 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~-~~kl~Dfg~a~~ 564 (720)
||||+++++|.++++ .+++.++..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++.
T Consensus 111 v~e~~~~~~l~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~ 180 (330)
T 3nsz_A 111 VFEHVNNTDFKQLYQ-------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 180 (330)
T ss_dssp EEECCCCCCHHHHGG-------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeccCchhHHHHHH-------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceE
Confidence 999999999999884 388999999999999999999999 999999999999999776 899999999986
Q ss_pred CCCCCccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHH--Hhhc-cc------
Q 005001 565 TPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLV--RWAT-PQ------ 634 (720)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~--~~~~-~~------ 634 (720)
...... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||............ .... +.
T Consensus 181 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 258 (330)
T 3nsz_A 181 YHPGQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 258 (330)
T ss_dssp CCTTCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHH
T ss_pred cCCCCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHH
Confidence 644322 234578999999999987 67899999999999999999999999654432211100 0000 00
Q ss_pred ---cccHHHHHhhccc--------ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 635 ---LHDIDALAKMVDP--------ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 635 ---~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
............. ......+...+.++.+||.+||+.||++|||++|++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 259 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0000000000000 01111222356789999999999999999999999875
No 219
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=4.9e-39 Score=333.71 Aligned_cols=253 Identities=24% Similarity=0.365 Sum_probs=207.5
Q ss_pred HHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEE
Q 005001 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 407 ~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (720)
...++|++.+.||+|+||.||+|... +++.||+|++............+.+|+.++++++||||+++++++...+..++
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 34567999999999999999999876 68999999997665555567789999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCC---CceEEcccCCC
Q 005001 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE---LNPHLSDCGLA 562 (720)
Q Consensus 486 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~---~~~kl~Dfg~a 562 (720)
||||+++++|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.+ +.+||+|||++
T Consensus 99 v~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~ 171 (287)
T 2wei_A 99 VGELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (287)
T ss_dssp EECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred EEEccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence 9999999999998863 35689999999999999999999999 99999999999999764 46999999999
Q ss_pred ccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHH
Q 005001 563 ALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALA 642 (720)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (720)
........ .....||+.|+|||.+.+. ++.++||||||+++|+|++|..||......... .
T Consensus 172 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~----------------~ 232 (287)
T 2wei_A 172 TCFQQNTK--MKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL----------------K 232 (287)
T ss_dssp GTBCCCSS--CSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----------------H
T ss_pred eeecCCCc--cccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHH----------------H
Confidence 76543322 2334689999999988764 899999999999999999999999764322111 1
Q ss_pred hhcccccCCCCC--hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 643 KMVDPALNGMYP--AKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 643 ~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.+.........+ ...+.++.+++.+||+.||++||++.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 233 RVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp HHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 111111111111 2346778999999999999999999999985
No 220
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=7e-40 Score=353.05 Aligned_cols=256 Identities=14% Similarity=0.091 Sum_probs=185.9
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc-ChHHHHHHHHH---HHHhhcCCCCCccccc-------eE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEA---VSNMSRLRHPNIVTLA-------GY 476 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e---~~~l~~l~h~niv~l~-------~~ 476 (720)
...|...+.||+|+||.||+|.+. +|+.||+|++..... .......+.+| +..++. +||||++++ ++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~ 139 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDA 139 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehh
Confidence 345888999999999999999875 789999999987554 23345567777 455555 799987754 44
Q ss_pred Eeec-----------------CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHH------HHHHHHHHHHHHHHHhcCC
Q 005001 477 CAEH-----------------GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNAR------VRVALGTARALEYLHEVCL 533 (720)
Q Consensus 477 ~~~~-----------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~------~~i~~qi~~~L~~LH~~~~ 533 (720)
+... ...++||||++ |+|.++++... ..+.+..+ ..++.||+.||+|||++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~-- 213 (371)
T 3q60_A 140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD---FVYVFRGDEGILALHILTAQLIRLAANLQSK-- 213 (371)
T ss_dssp EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH---HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc---cccchhhhhhhhhHHHHHHHHHHHHHHHHHC--
Confidence 4433 33799999998 79999997532 23344445 67789999999999999
Q ss_pred CCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccccccccccccccCcccccc--CCCcccchhhhHHHHHHHHHh
Q 005001 534 PSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALS--GIYTVKSDVYSFGVVMLELLT 611 (720)
Q Consensus 534 ~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~ellt 611 (720)
+|+||||||+|||++.++.+||+|||+++..... .....+|+.|+|||++.+ ..++.++|||||||++|||++
T Consensus 214 -~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~ellt 288 (371)
T 3q60_A 214 -GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWC 288 (371)
T ss_dssp -TEEETTCSGGGEEECTTSCEEECCGGGEEETTCE----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHH
T ss_pred -CCccCcCCHHHEEECCCCCEEEEecceeeecCCC----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHh
Confidence 9999999999999999999999999999865422 113467799999999987 679999999999999999999
Q ss_pred CCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 612 GRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 612 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
|+.||....+...... ... ..................+..+.+||.+||+.||++||++.+++++
T Consensus 289 g~~Pf~~~~~~~~~~~---~~~------~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 289 LFLPFGLVTPGIKGSW---KRP------SLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp SSCSTTBCCTTCTTCC---CBC------CTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred CCCCCCCcCcccccch---hhh------hhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 9999987643211100 000 0000001111112223567789999999999999999999999864
No 221
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3.5e-39 Score=340.66 Aligned_cols=254 Identities=21% Similarity=0.317 Sum_probs=198.4
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccC------hHHHHHHHHHHHHhhcCCCCCccccceEEeec
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS------LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH 480 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 480 (720)
..++|...+.||+|+||.||+|.+. +++.||||.+...... ......+.+|++++++++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 4567999999999999999999775 5889999998754321 12234578999999999999999999998765
Q ss_pred CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCc---eEEc
Q 005001 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN---PHLS 557 (720)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~---~kl~ 557 (720)
+ .++||||+++++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~ 159 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVV----GNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 159 (322)
T ss_dssp S-EEEEEECCTTEETHHHHS----TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEEC
T ss_pred c-eEEEEecCCCCcHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEc
Confidence 4 899999999999999886 356799999999999999999999999 9999999999999987664 9999
Q ss_pred ccCCCccCCCCCccccccccccccccCccccc---cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchh-hHHHhhcc
Q 005001 558 DCGLAALTPNTERQVSTQMVGAFGYSAPEFAL---SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQ-SLVRWATP 633 (720)
Q Consensus 558 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~-~~~~~~~~ 633 (720)
|||++...... .......||+.|+|||++. +..++.++|||||||++|||++|..||......... ..+.
T Consensus 160 Dfg~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~---- 233 (322)
T 2ycf_A 160 DFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT---- 233 (322)
T ss_dssp CCTTCEECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHH----
T ss_pred cCccceecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHH----
Confidence 99999876432 2223457999999999974 466899999999999999999999999765432111 1110
Q ss_pred ccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 634 QLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.... ..........+..+.+++.+||+.||++||++.+++++
T Consensus 234 ---------~~~~-~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 234 ---------SGKY-NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp ---------HTCC-CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ---------hCcc-ccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 0000 00000011345678899999999999999999999853
No 222
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=4.4e-39 Score=346.68 Aligned_cols=264 Identities=20% Similarity=0.311 Sum_probs=203.7
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeE---
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR--- 483 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~--- 483 (720)
..++|...+.||+|+||.||+|.+. +|+.||+|++............+.+|+.+++.++||||+++++++...+..
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 3468999999999999999999765 689999999987665666678889999999999999999999999877654
Q ss_pred ---EEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccC
Q 005001 484 ---LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (720)
Q Consensus 484 ---~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 560 (720)
++||||+. ++|.+++. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg 189 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMG------MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFG 189 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTT
T ss_pred eeEEEEEcccc-ccHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecC
Confidence 99999997 58888774 4599999999999999999999999 99999999999999999999999999
Q ss_pred CCccCCCCCccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHH-Hhh-cc----
Q 005001 561 LAALTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLV-RWA-TP---- 633 (720)
Q Consensus 561 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~-~~~-~~---- 633 (720)
+++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+ ... .+
T Consensus 190 ~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 265 (371)
T 4exu_A 190 LARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEF 265 (371)
T ss_dssp CC------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHH
T ss_pred cccccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHH
Confidence 99765332 234578999999999987 77899999999999999999999999865432221111 100 00
Q ss_pred --cccc--HHHHHhhcccccCCC---CChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 634 --QLHD--IDALAKMVDPALNGM---YPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 634 --~~~~--~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.... .....+......... .....+..+.+|+.+||+.||++|||+.|++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 266 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0000 000001111000000 012345788999999999999999999999976
No 223
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=9.6e-39 Score=333.28 Aligned_cols=253 Identities=25% Similarity=0.330 Sum_probs=206.1
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEcccccc---C----hHHHHHHHHHHHHhhcCC-CCCccccceEEe
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL---S----LQEEDNFLEAVSNMSRLR-HPNIVTLAGYCA 478 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~----~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~ 478 (720)
..++|+..+.||+|+||.||+|.+. +|+.||+|++..... . ......+.+|+.+++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 4578999999999999999999875 688999999864421 1 123456789999999995 999999999999
Q ss_pred ecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcc
Q 005001 479 EHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSD 558 (720)
Q Consensus 479 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~D 558 (720)
..+..++||||+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~d 167 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTD 167 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred cCCeEEEEEeccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEec
Confidence 99999999999999999999973 35789999999999999999999999 999999999999999999999999
Q ss_pred cCCCccCCCCCccccccccccccccCccccc------cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhc
Q 005001 559 CGLAALTPNTERQVSTQMVGAFGYSAPEFAL------SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWAT 632 (720)
Q Consensus 559 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~ 632 (720)
||++....... ......||+.|+|||++. ...++.++||||||+++|||++|+.||........
T Consensus 168 fg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-------- 237 (298)
T 1phk_A 168 FGFSCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLM-------- 237 (298)
T ss_dssp CTTCEECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--------
T ss_pred ccchhhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHH--------
Confidence 99997664332 223457999999999985 45688999999999999999999999975432111
Q ss_pred cccccHHHHHhhcccccCC--CCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 633 PQLHDIDALAKMVDPALNG--MYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
...+....... ......+..+.+++.+||+.||++||++.|++++
T Consensus 238 --------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 238 --------LRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp --------HHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred --------HHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 11111111111 1123456789999999999999999999999864
No 224
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.2e-38 Score=349.62 Aligned_cols=265 Identities=19% Similarity=0.265 Sum_probs=201.6
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcC------CCCCccccceEEeec
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL------RHPNIVTLAGYCAEH 480 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~l~~~~~~~ 480 (720)
...+|++.+.||+|+||.||+|.+. +++.||||++... ......+.+|+.+++.+ +|+||+++++++...
T Consensus 95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 171 (429)
T 3kvw_A 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR 171 (429)
T ss_dssp ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET
T ss_pred ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc---cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC
Confidence 3567999999999999999999765 5889999999753 23345566666666555 678999999999999
Q ss_pred CeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCc--eEEcc
Q 005001 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN--PHLSD 558 (720)
Q Consensus 481 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~--~kl~D 558 (720)
+..++||||+. ++|.+++... ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++. +||+|
T Consensus 172 ~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~D 245 (429)
T 3kvw_A 172 NHICMTFELLS-MNLYELIKKN--KFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVID 245 (429)
T ss_dssp TEEEEEECCCC-CBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECC
T ss_pred CeEEEEEeccC-CCHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEee
Confidence 99999999996 5999988742 235689999999999999999999999 9999999999999999987 99999
Q ss_pred cCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHH-hhcccccc
Q 005001 559 CGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVR-WATPQLHD 637 (720)
Q Consensus 559 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~-~~~~~~~~ 637 (720)
||++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...........+. ........
T Consensus 246 FG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~ 321 (429)
T 3kvw_A 246 FGSSCYEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQK 321 (429)
T ss_dssp CTTCEETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHH
T ss_pred cccceecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHH
Confidence 9999764432 234579999999999999999999999999999999999999998765432221111 00000000
Q ss_pred ----HHHHHhhccccc---------------------------CC---------CCChhHHHHHHHHHHHhcCCCCCCCC
Q 005001 638 ----IDALAKMVDPAL---------------------------NG---------MYPAKSLSRFADIIALCVQPEPEFRP 677 (720)
Q Consensus 638 ----~~~~~~~~~~~~---------------------------~~---------~~~~~~~~~l~~li~~cl~~dP~~RP 677 (720)
.......++... .. ..+...+..+.+||.+||+.||++||
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rp 401 (429)
T 3kvw_A 322 LLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRM 401 (429)
T ss_dssp HHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSC
T ss_pred HHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCC
Confidence 000000000000 00 00111246788999999999999999
Q ss_pred CHHHHHHH
Q 005001 678 PMSEVVQA 685 (720)
Q Consensus 678 s~~ell~~ 685 (720)
|+.|++++
T Consensus 402 ta~e~L~H 409 (429)
T 3kvw_A 402 TPGQALRH 409 (429)
T ss_dssp CHHHHHTS
T ss_pred CHHHHhCC
Confidence 99999975
No 225
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=3.2e-39 Score=337.61 Aligned_cols=253 Identities=24% Similarity=0.419 Sum_probs=201.5
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
..++|++.+.||+|+||.||+|.+. +++.||+|++.... ......+.+|+.+++.++||||+++++++...+..++|
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 94 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC--HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence 4578999999999999999999886 58899999986543 33456788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||+++++|.+++... ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 95 ~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (302)
T 2j7t_A 95 IEFCPGGAVDAIMLEL---DRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL 168 (302)
T ss_dssp EECCTTEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHH
T ss_pred EEeCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccc
Confidence 9999999999988632 46699999999999999999999999 99999999999999999999999999875321
Q ss_pred CCCccccccccccccccCccccc-----cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHH
Q 005001 567 NTERQVSTQMVGAFGYSAPEFAL-----SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDAL 641 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (720)
.. ........||+.|+|||++. +..++.++||||||+++|||++|+.||.........
T Consensus 169 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---------------- 231 (302)
T 2j7t_A 169 KT-LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL---------------- 231 (302)
T ss_dssp HH-HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH----------------
T ss_pred cc-ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHH----------------
Confidence 11 01122356899999999984 667899999999999999999999999764322111
Q ss_pred Hhhcccc-cCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 642 AKMVDPA-LNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 642 ~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.+..... .....+...+..+.+++.+||+.||++||++.+++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 232 LKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp HHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred HHHhccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 1111111 1112344566789999999999999999999999863
No 226
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2.5e-38 Score=336.15 Aligned_cols=265 Identities=18% Similarity=0.291 Sum_probs=205.3
Q ss_pred HhcCCCccceeccCCCcEEEEEEE--cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCC------CccccceEEee
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEF--ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHP------NIVTLAGYCAE 479 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~------niv~l~~~~~~ 479 (720)
..++|++.+.||+|+||.||+|.+ .+++.||+|++... ......+.+|+.+++.++|+ +++++++++..
T Consensus 12 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~ 88 (339)
T 1z57_A 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV---DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH 88 (339)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE
T ss_pred ccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC---CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc
Confidence 456899999999999999999976 36889999999643 23456677888888777655 59999999999
Q ss_pred cCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC---------
Q 005001 480 HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD--------- 550 (720)
Q Consensus 480 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~--------- 550 (720)
.+..++||||+ +++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 89 ~~~~~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~ 162 (339)
T 1z57_A 89 HGHICIVFELL-GLSTYDFIKEN--GFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNP 162 (339)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC-
T ss_pred CCcEEEEEcCC-CCCHHHHHHhc--CCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCC
Confidence 99999999999 78999998742 234689999999999999999999999 9999999999999987
Q ss_pred ----------CCceEEcccCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCC
Q 005001 551 ----------ELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSR 620 (720)
Q Consensus 551 ----------~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~ 620 (720)
++.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||++|..||....
T Consensus 163 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 238 (339)
T 1z57_A 163 KIKRDERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD 238 (339)
T ss_dssp ---CEEEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSC
T ss_pred ccccccccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence 668999999999765432 234579999999999999999999999999999999999999998655
Q ss_pred CcchhhHHHhhcccccc---------------------H----HHHHhhcccc-cCCCCChhHHHHHHHHHHHhcCCCCC
Q 005001 621 PRSEQSLVRWATPQLHD---------------------I----DALAKMVDPA-LNGMYPAKSLSRFADIIALCVQPEPE 674 (720)
Q Consensus 621 ~~~~~~~~~~~~~~~~~---------------------~----~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~ 674 (720)
.......+......... . ....+...+. .....+...+..+.+|+.+||+.||+
T Consensus 239 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 318 (339)
T 1z57_A 239 SKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPA 318 (339)
T ss_dssp HHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTT
T ss_pred hHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcc
Confidence 43222211111000000 0 0000111100 01122345678899999999999999
Q ss_pred CCCCHHHHHHH
Q 005001 675 FRPPMSEVVQA 685 (720)
Q Consensus 675 ~RPs~~ell~~ 685 (720)
+|||+.|++++
T Consensus 319 ~Rpt~~ell~h 329 (339)
T 1z57_A 319 KRITLREALKH 329 (339)
T ss_dssp TSCCHHHHTTS
T ss_pred cccCHHHHhcC
Confidence 99999999865
No 227
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=5.9e-39 Score=339.40 Aligned_cols=270 Identities=23% Similarity=0.327 Sum_probs=202.6
Q ss_pred HhcCCCccceeccCCCcEEEEEEE--cCCcEEEEEEccccccChHHHHHHHHHHHHhhcC---CCCCccccceEEe----
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEF--ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL---RHPNIVTLAGYCA---- 478 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~---- 478 (720)
..++|+..+.||+|+||.||+|.+ .+|+.||+|++............+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999987 4688999999875443322223455666655544 8999999999987
Q ss_pred -ecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEc
Q 005001 479 -EHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLS 557 (720)
Q Consensus 479 -~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~ 557 (720)
.....++||||++ |+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHS--CTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEe
Confidence 4567899999998 5999998743 234589999999999999999999999 99999999999999999999999
Q ss_pred ccCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHH-Hh-hccc-
Q 005001 558 DCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLV-RW-ATPQ- 634 (720)
Q Consensus 558 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~-~~-~~~~- 634 (720)
|||++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+ .. ..+.
T Consensus 163 Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 240 (326)
T 1blx_A 163 DFGLARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 240 (326)
T ss_dssp SCCSCCCCCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCG
T ss_pred cCcccccccCC--CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCc
Confidence 99999765432 2233467899999999999999999999999999999999999999865432221111 10 0000
Q ss_pred --cccHHHHH-hhcc---cccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 635 --LHDIDALA-KMVD---PALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 635 --~~~~~~~~-~~~~---~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+....... .... ...........+..+.+|+.+||+.||++||++.|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 241 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000000 0000 000011223456788999999999999999999999864
No 228
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2.2e-38 Score=339.05 Aligned_cols=263 Identities=20% Similarity=0.312 Sum_probs=203.1
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCe-----
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ----- 482 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 482 (720)
.++|...+.||+|+||.||+|.+. +|+.||||++............+.+|+.+++.++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 467889999999999999999875 68999999997665555667788999999999999999999999987654
Q ss_pred -EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCC
Q 005001 483 -RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (720)
Q Consensus 483 -~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 561 (720)
.++||||+. ++|.+++. ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMG------LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCEEEEECCS-EEGGGTTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEecccc-CCHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeeccc
Confidence 499999997 58888774 4599999999999999999999999 999999999999999999999999999
Q ss_pred CccCCCCCccccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHH-Hh-hcc-----
Q 005001 562 AALTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLV-RW-ATP----- 633 (720)
Q Consensus 562 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~-~~-~~~----- 633 (720)
+...... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+ .. ..+
T Consensus 173 ~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 248 (353)
T 3coi_A 173 ARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFV 248 (353)
T ss_dssp TTC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHH
T ss_pred ccCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 9765332 234578999999999987 67899999999999999999999999865432211111 00 000
Q ss_pred -ccccH--HHHHhhcccccC---CCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 634 -QLHDI--DALAKMVDPALN---GMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 634 -~~~~~--~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
..... ....+....... .......+..+.+++.+||+.||++||++.+++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 249 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp TTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000 000011111111 11223456789999999999999999999999875
No 229
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=336.04 Aligned_cols=265 Identities=22% Similarity=0.307 Sum_probs=197.6
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEe---------
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCA--------- 478 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--------- 478 (720)
.++|+..+.||+|+||.||+|.+. +++.||+|++... .....+.+.+|+.++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 87 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDD 87 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC-
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC--ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccc
Confidence 467899999999999999999876 4899999998643 3455678899999999999999999998873
Q ss_pred -----ecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeC-CCC
Q 005001 479 -----EHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD-DEL 552 (720)
Q Consensus 479 -----~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~-~~~ 552 (720)
..+..++||||++ |+|.++++ .+.+++..+..++.|++.||+|||+. +|+||||||+||+++ .++
T Consensus 88 ~~~~~~~~~~~lv~e~~~-~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 158 (320)
T 2i6l_A 88 VGSLTELNSVYIVQEYME-TDLANVLE-----QGPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDL 158 (320)
T ss_dssp ---CCSCSEEEEEEECCS-EEHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTT
T ss_pred cccccccCceeEEeeccC-CCHHHHhh-----cCCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCC
Confidence 3467899999998 59999986 46789999999999999999999999 999999999999997 567
Q ss_pred ceEEcccCCCccCCCCCc--cccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHH
Q 005001 553 NPHLSDCGLAALTPNTER--QVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVR 629 (720)
Q Consensus 553 ~~kl~Dfg~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~ 629 (720)
.+||+|||+++....... .......+|+.|+|||.+.+ ..++.++|||||||++|||++|+.||...........+.
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 238 (320)
T 2i6l_A 159 VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLIL 238 (320)
T ss_dssp EEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred eEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 999999999986643221 11233467999999998876 678999999999999999999999998765332222111
Q ss_pred hhccccccHHHHHhhcc-------cccC-CC-----CChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 630 WATPQLHDIDALAKMVD-------PALN-GM-----YPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 630 ~~~~~~~~~~~~~~~~~-------~~~~-~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
...+.... ....+... .... .. .....+.++.+++.+||+.||++||++.|++++
T Consensus 239 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 239 ESIPVVHE-EDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHSCCCCH-HHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HhcCCCch-hhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 11111110 00000000 0000 00 112356789999999999999999999999975
No 230
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.4e-38 Score=341.49 Aligned_cols=272 Identities=22% Similarity=0.289 Sum_probs=194.8
Q ss_pred cHHHHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCe
Q 005001 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (720)
Q Consensus 404 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (720)
......++|+..+.||+|+||.||+|.+. +|+.||||++...... ...+.++++.++.++||||+++++++...+.
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~ 93 (360)
T 3e3p_A 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF---RNRELQIMQDLAVLHHPNIVQLQSYFYTLGE 93 (360)
T ss_dssp HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC---CCHHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc---cHHHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence 45566789999999999999999999875 6899999988543322 2345667777888899999999999876443
Q ss_pred -------EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH--hcCCCCcEEecCCCCCEEeCC-CC
Q 005001 483 -------RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLH--EVCLPSVVHRNFKSANILLDD-EL 552 (720)
Q Consensus 483 -------~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH--~~~~~~iiH~Dlkp~NIll~~-~~ 552 (720)
.++||||+++ +|.+.+.........+++..+..++.|++.||.||| +. +|+||||||+|||++. ++
T Consensus 94 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~ 169 (360)
T 3e3p_A 94 RDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADG 169 (360)
T ss_dssp SCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTT
T ss_pred ccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCC
Confidence 7899999986 666555443345678899999999999999999999 77 9999999999999997 89
Q ss_pred ceEEcccCCCccCCCCCccccccccccccccCccccccCC-CcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhh
Q 005001 553 NPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGI-YTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWA 631 (720)
Q Consensus 553 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~ 631 (720)
.+||+|||+++....... .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||...........+...
T Consensus 170 ~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~ 247 (360)
T 3e3p_A 170 TLKLCDFGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRV 247 (360)
T ss_dssp EEEECCCTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred cEEEeeCCCceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHH
Confidence 999999999987654332 23457899999999997654 899999999999999999999999875533222111100
Q ss_pred ccccccHHHHHhhccc---------------ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 632 TPQLHDIDALAKMVDP---------------ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 632 ~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
. .............. ......+...+.++.+|+.+||+.||++|||+.|++++
T Consensus 248 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 248 L-GCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp H-CCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred c-CCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0 00000111111000 00011222356789999999999999999999999976
No 231
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=7.3e-39 Score=349.26 Aligned_cols=268 Identities=22% Similarity=0.351 Sum_probs=185.1
Q ss_pred cCCCc-cceeccCCCcEEEEEEEc---CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEee--cCeE
Q 005001 410 NSFSQ-EFLIGEGSLGRVYRAEFA---NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE--HGQR 483 (720)
Q Consensus 410 ~~y~~-~~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~ 483 (720)
+.|+. .++||+|+||.||+|.+. +++.||+|++..... ...+.+|+.++++++||||+++++++.. ....
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 95 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSHADRKV 95 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC----CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC----CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeE
Confidence 34555 447999999999999875 578999999975432 2457789999999999999999999954 6789
Q ss_pred EEEEEecCCCCHHHHhhhccC-----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEe----CCCCce
Q 005001 484 LLVYEYVGNGNLHDMLHFADD-----SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL----DDELNP 554 (720)
Q Consensus 484 ~lV~e~~~~gsL~~~l~~~~~-----~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll----~~~~~~ 554 (720)
++||||+.+ +|.+++..... ....+++..++.++.||+.||+|||+. +|+||||||+|||+ +.++.+
T Consensus 96 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~ 171 (405)
T 3rgf_A 96 WLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRV 171 (405)
T ss_dssp EEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCE
T ss_pred EEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcE
Confidence 999999975 88888764321 123589999999999999999999999 99999999999999 677899
Q ss_pred EEcccCCCccCCCCCc--cccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCCCCcc-------h
Q 005001 555 HLSDCGLAALTPNTER--QVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSSRPRS-------E 624 (720)
Q Consensus 555 kl~Dfg~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~-------~ 624 (720)
||+|||+++....... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||....... .
T Consensus 172 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~ 251 (405)
T 3rgf_A 172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHH 251 (405)
T ss_dssp EECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCH
T ss_pred EEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchH
Confidence 9999999987653221 222346799999999999874 58999999999999999999999997654321 0
Q ss_pred h---hHHH-hhccccc---------cHHHHHhhcccccCCCC---------ChhHHHHHHHHHHHhcCCCCCCCCCHHHH
Q 005001 625 Q---SLVR-WATPQLH---------DIDALAKMVDPALNGMY---------PAKSLSRFADIIALCVQPEPEFRPPMSEV 682 (720)
Q Consensus 625 ~---~~~~-~~~~~~~---------~~~~~~~~~~~~~~~~~---------~~~~~~~l~~li~~cl~~dP~~RPs~~el 682 (720)
. .+.. ...+... ................. ....+..+.+||.+||+.||++|||++|+
T Consensus 252 ~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~ 331 (405)
T 3rgf_A 252 DQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQA 331 (405)
T ss_dssp HHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred HHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHH
Confidence 0 0000 0001000 00011110100000000 00114567899999999999999999999
Q ss_pred HHH
Q 005001 683 VQA 685 (720)
Q Consensus 683 l~~ 685 (720)
+++
T Consensus 332 L~h 334 (405)
T 3rgf_A 332 MQD 334 (405)
T ss_dssp HTS
T ss_pred hcC
Confidence 976
No 232
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.8e-38 Score=331.60 Aligned_cols=251 Identities=25% Similarity=0.409 Sum_probs=195.9
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEee-------
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE------- 479 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------- 479 (720)
..++|+..+.||+|+||.||+|... +++.||+|++... ......+.+|+.++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT---EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKP 80 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc---HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhh
Confidence 3467889999999999999999875 7899999999542 3456778999999999999999999998755
Q ss_pred ------cCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCc
Q 005001 480 ------HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN 553 (720)
Q Consensus 480 ------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~ 553 (720)
.+..++||||+++|+|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~ 154 (303)
T 1zy4_A 81 MTAVKKKSTLFIQMEYCENGTLYDLIHS---ENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRN 154 (303)
T ss_dssp -----CEEEEEEEEECCCSCBHHHHHHH---SCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSC
T ss_pred hcccccCCceEEEEecCCCCCHHHhhhc---cccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCC
Confidence 4567999999999999999973 245678899999999999999999999 9999999999999999999
Q ss_pred eEEcccCCCccCCCCC-------------ccccccccccccccCccccccC-CCcccchhhhHHHHHHHHHhCCCCCCCC
Q 005001 554 PHLSDCGLAALTPNTE-------------RQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLDSS 619 (720)
Q Consensus 554 ~kl~Dfg~a~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~pf~~~ 619 (720)
+||+|||++....... ........||+.|+|||++.+. .++.++|||||||++|||++ ||...
T Consensus 155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~ 231 (303)
T 1zy4_A 155 VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG 231 (303)
T ss_dssp EEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH
T ss_pred EEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc
Confidence 9999999997654321 1122345699999999999865 68999999999999999998 55421
Q ss_pred CCcchhhHHHhhccccccHHHHHhhc--ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 620 RPRSEQSLVRWATPQLHDIDALAKMV--DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.. .. .....+. .......++...+..+.+++.+||+.||++||++.+++++
T Consensus 232 ~~--~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 232 ME--RV-------------NILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HH--HH-------------HHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hh--HH-------------HHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 10 00 0111111 1122223445566778999999999999999999999875
No 233
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.8e-38 Score=338.19 Aligned_cols=268 Identities=22% Similarity=0.327 Sum_probs=203.4
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeec-----C
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH-----G 481 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~ 481 (720)
..++|...+.||+|+||.||+|.+. +|+.||||++.... .......+.+|+.++++++||||+++++++... .
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 87 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD-KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN 87 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc-cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence 3467899999999999999999875 68999999996432 344566788999999999999999999987654 6
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCC
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 561 (720)
..++||||+. ++|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 88 ~~~lv~e~~~-~~L~~~~~-----~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVIS-----TQMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGL 158 (353)
T ss_dssp CEEEEECCCS-EEHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEeccC-ccHHHHHh-----hcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccc
Confidence 7899999997 59999886 25789999999999999999999999 999999999999999999999999999
Q ss_pred CccCCCCCcc---------ccccccccccccCcccccc-CCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHH-h
Q 005001 562 AALTPNTERQ---------VSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVR-W 630 (720)
Q Consensus 562 a~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~-~ 630 (720)
+......... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+. .
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 238 (353)
T 2b9h_A 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGI 238 (353)
T ss_dssp CEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred ccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHH
Confidence 9866432211 1123578999999998765 678999999999999999999999998654322111110 0
Q ss_pred -hcccc------ccHHHHHhhcccccC-CC-----CChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 631 -ATPQL------HDIDALAKMVDPALN-GM-----YPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 631 -~~~~~------~~~~~~~~~~~~~~~-~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
..+.. ............... .. .....+..+.+++.+||+.||++||++.|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 239 IGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp HCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000 000001111100000 00 012355678999999999999999999999875
No 234
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=2.5e-38 Score=344.10 Aligned_cols=266 Identities=17% Similarity=0.241 Sum_probs=202.6
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCC--------CCCccccceEEe
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR--------HPNIVTLAGYCA 478 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~l~~~~~ 478 (720)
..++|++.+.||+|+||.||+|.+. +++.||+|++... ......+.+|+.+++.++ |+||+++++++.
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~ 111 (397)
T 1wak_A 35 FNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA---EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFK 111 (397)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEE
T ss_pred cCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC---CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeeccee
Confidence 3578999999999999999999764 6889999999643 344567888999888875 788999999987
Q ss_pred ----ecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCC--
Q 005001 479 ----EHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL-- 552 (720)
Q Consensus 479 ----~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~-- 552 (720)
.....++||||+ +++|.+.+.. .....+++..+..++.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 112 ~~~~~~~~~~lv~e~~-~~~l~~~~~~--~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~ 186 (397)
T 1wak_A 112 ISGVNGTHICMVFEVL-GHHLLKWIIK--SNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQY 186 (397)
T ss_dssp EEETTEEEEEEEECCC-CCBHHHHHHH--TTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHH
T ss_pred ecCCCCceEEEEEecc-CccHHHHHHh--cccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchh
Confidence 456789999999 5566666642 22367999999999999999999999964 899999999999999775
Q ss_pred -----------------------------------------------ceEEcccCCCccCCCCCccccccccccccccCc
Q 005001 553 -----------------------------------------------NPHLSDCGLAALTPNTERQVSTQMVGAFGYSAP 585 (720)
Q Consensus 553 -----------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aP 585 (720)
.+||+|||++...... .....||+.|+||
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aP 262 (397)
T 1wak_A 187 IRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSL 262 (397)
T ss_dssp HHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCH
T ss_pred hhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCC
Confidence 7999999999865432 2345799999999
Q ss_pred cccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchh---hHHHh---hccccccHHHHHh-----hccc-------
Q 005001 586 EFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQ---SLVRW---ATPQLHDIDALAK-----MVDP------- 647 (720)
Q Consensus 586 E~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~---~~~~~---~~~~~~~~~~~~~-----~~~~------- 647 (720)
|++.+..++.++|||||||++|||++|+.||......... ..... ............. ....
T Consensus 263 E~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 342 (397)
T 1wak_A 263 EVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHI 342 (397)
T ss_dssp HHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSC
T ss_pred hhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccc
Confidence 9999999999999999999999999999999865543211 00000 0000000000000 0000
Q ss_pred ------------ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 648 ------------ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 648 ------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
......+...+..+.+||.+||+.||++|||+.|++++
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 343 TKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred cccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 00112356677889999999999999999999999864
No 235
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.3e-38 Score=337.16 Aligned_cols=256 Identities=27% Similarity=0.406 Sum_probs=183.1
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHH-HhhcCCCCCccccceEEeecCeEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVS-NMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
.++|+..+.||+|+||.||+|.+. +|+.||+|++.... .......+.+|+. +++.++||||+++++++...+..++|
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv 99 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV-DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC 99 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC-CHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc-CchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence 467888999999999999999875 68999999997553 2333445555555 67788999999999999999999999
Q ss_pred EEecCCCCHHHHhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 487 YEYVGNGNLHDMLHFAD-DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~-~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
|||+++ +|.+++.... .....+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||+++..
T Consensus 100 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 100 MELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp ECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred EeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 999985 8888776322 23567899999999999999999999962 8999999999999999999999999999765
Q ss_pred CCCCccccccccccccccCcccc----ccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHH
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFA----LSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDAL 641 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (720)
.... ......||+.|+|||++ .+..++.++||||||+++|||++|+.||........ .+
T Consensus 177 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---------------~~ 239 (327)
T 3aln_A 177 VDSI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD---------------QL 239 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC----------------------
T ss_pred cccc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH---------------HH
Confidence 4322 22334799999999999 456789999999999999999999999975432110 00
Q ss_pred Hhhcc---cccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 642 AKMVD---PALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 642 ~~~~~---~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
..... +..........+..+.+++.+||+.||++||++.+++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 240 TQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 01111 111111223456789999999999999999999999875
No 236
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=9.3e-38 Score=337.78 Aligned_cols=209 Identities=24% Similarity=0.305 Sum_probs=173.6
Q ss_pred hhcHHHHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCC-CC-----Cccccc
Q 005001 402 VASLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HP-----NIVTLA 474 (720)
Q Consensus 402 ~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~l~ 474 (720)
+.......++|+..+.||+|+||.||+|.+. +++.||||++... ......+.+|+.+++.++ |+ +|++++
T Consensus 46 ~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~ 122 (382)
T 2vx3_A 46 VKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK---KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLK 122 (382)
T ss_dssp CCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEE
T ss_pred eecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc---HHHHHHHHHHHHHHHHHHhcccccceeEEEee
Confidence 3344555688999999999999999999775 6889999999743 233455667777777664 44 499999
Q ss_pred eEEeecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeC--CCC
Q 005001 475 GYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD--DEL 552 (720)
Q Consensus 475 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~--~~~ 552 (720)
+++...+..++||||+++ +|.+++... ....+++..+..++.|++.||.|||+. ..+|+||||||+|||++ .++
T Consensus 123 ~~~~~~~~~~lv~e~~~~-~L~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~ 198 (382)
T 2vx3_A 123 RHFMFRNHLCLVFEMLSY-NLYDLLRNT--NFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRS 198 (382)
T ss_dssp EEEEETTEEEEEEECCCC-BHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSC
T ss_pred eeeccCCceEEEEecCCC-CHHHHHhhc--CcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCC
Confidence 999999999999999964 999998743 235689999999999999999999952 12999999999999995 478
Q ss_pred ceEEcccCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCC
Q 005001 553 NPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRP 621 (720)
Q Consensus 553 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~ 621 (720)
.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 199 ~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~ 263 (382)
T 2vx3_A 199 AIKIVDFGSSCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263 (382)
T ss_dssp CEEECCCTTCEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred cEEEEeccCceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 8999999999876432 2345799999999999999999999999999999999999999987554
No 237
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=3.9e-38 Score=334.53 Aligned_cols=252 Identities=19% Similarity=0.277 Sum_probs=174.9
Q ss_pred HhcCCCccc-eeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEee----cC
Q 005001 408 ATNSFSQEF-LIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE----HG 481 (720)
Q Consensus 408 ~~~~y~~~~-~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~ 481 (720)
..++|.+.+ +||+|+||.||+|.+. +|+.||+|++.... .... +....++.++||||+++++++.. ..
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~---e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 99 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP---KARQ---EVDHHWQASGGPHIVCILDVYENMHHGKR 99 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH---HHHH---HHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH---HHHH---HHHHHHHhcCCCChHHHHHHHhhccCCCc
Confidence 356788754 6999999999999876 68999999986431 1122 22233556799999999999876 45
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC---CCceEEcc
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD---ELNPHLSD 558 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~---~~~~kl~D 558 (720)
..++||||+++|+|.+++... ....+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 100 ~~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~D 174 (336)
T 3fhr_A 100 CLLIIMECMEGGELFSRIQER--GDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTD 174 (336)
T ss_dssp EEEEEEECCTTEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred eEEEEEeccCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEec
Confidence 589999999999999999732 235799999999999999999999999 9999999999999976 45599999
Q ss_pred cCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccH
Q 005001 559 CGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDI 638 (720)
Q Consensus 559 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 638 (720)
||++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||............
T Consensus 175 fg~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~---------- 241 (336)
T 3fhr_A 175 FGFAKETTQN---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGM---------- 241 (336)
T ss_dssp CTTCEEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------
T ss_pred cccceecccc---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhH----------
Confidence 9999765432 223457899999999999999999999999999999999999999764432110000
Q ss_pred HHHHhhccc--ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 639 DALAKMVDP--ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 639 ~~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
...+... ..........+..+.+|+.+||+.||++|||+.|++++
T Consensus 242 --~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 242 --KRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp -----------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred --HHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000000 11111123456789999999999999999999999986
No 238
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=3.3e-38 Score=346.73 Aligned_cols=253 Identities=22% Similarity=0.321 Sum_probs=189.4
Q ss_pred cCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEEEEE
Q 005001 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVYE 488 (720)
Q Consensus 410 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e 488 (720)
+.|...+.||+|+||+||.+...+|+.||||++... ....+.+|+.+++++ +||||+++++++.+.+..++|||
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E 89 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALE 89 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG-----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH-----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEe
Confidence 445667889999999998877778999999998543 234567899998875 89999999999999999999999
Q ss_pred ecCCCCHHHHhhhccCCCCC---CCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCC-------------C
Q 005001 489 YVGNGNLHDMLHFADDSSKN---LTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE-------------L 552 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~---~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~-------------~ 552 (720)
|++ |+|.+++......... .++..+..++.||+.||+|||+. +|+||||||+|||++.+ +
T Consensus 90 ~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~ 165 (434)
T 2rio_A 90 LCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENL 165 (434)
T ss_dssp CCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSC
T ss_pred cCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCce
Confidence 996 5999999743221111 13345678999999999999999 99999999999999754 4
Q ss_pred ceEEcccCCCccCCCCCcc---ccccccccccccCcccccc-------CCCcccchhhhHHHHHHHHHh-CCCCCCCCCC
Q 005001 553 NPHLSDCGLAALTPNTERQ---VSTQMVGAFGYSAPEFALS-------GIYTVKSDVYSFGVVMLELLT-GRKPLDSSRP 621 (720)
Q Consensus 553 ~~kl~Dfg~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~ 621 (720)
.+||+|||++......... ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||.....
T Consensus 166 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~ 245 (434)
T 2rio_A 166 RILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 245 (434)
T ss_dssp EEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT
T ss_pred EEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh
Confidence 8999999999876543222 1234579999999999976 668999999999999999999 9999975432
Q ss_pred cchhhHHHhhccccccHHHHHhhcc-cccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 622 RSEQSLVRWATPQLHDIDALAKMVD-PALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.. .... ..... +......+...+.++.+++.+||+.||++||++.+++++
T Consensus 246 ~~-~~i~-------------~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 246 RE-SNII-------------RGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp HH-HHHH-------------HTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hH-HHHh-------------cCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 21 1111 11111 111122244667889999999999999999999999863
No 239
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.8e-37 Score=331.81 Aligned_cols=265 Identities=18% Similarity=0.279 Sum_probs=202.0
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CC-cEEEEEEccccccChHHHHHHHHHHHHhhcCCCCC------ccccceEEee
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NG-KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN------IVTLAGYCAE 479 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~ 479 (720)
..++|++.+.||+|+||.||+|... ++ +.||+|++... ......+.+|+.+++.++|++ ++.+++++..
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 93 (355)
T 2eu9_A 17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV---GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF 93 (355)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc---ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence 4578999999999999999999875 34 68999999643 334566778888888886655 8899999999
Q ss_pred cCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEe-----------
Q 005001 480 HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL----------- 548 (720)
Q Consensus 480 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll----------- 548 (720)
.+..++||||+ +++|.+++.. .....+++.++..++.||+.||+|||+. +|+||||||+|||+
T Consensus 94 ~~~~~lv~e~~-~~~l~~~l~~--~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~ 167 (355)
T 2eu9_A 94 HGHMCIAFELL-GKNTFEFLKE--NNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNE 167 (355)
T ss_dssp TTEEEEEEECC-CCBHHHHHHH--TTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECC
T ss_pred CCeEEEEEecc-CCChHHHHHh--ccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccc
Confidence 99999999999 5577777653 2235799999999999999999999999 99999999999999
Q ss_pred --------CCCCceEEcccCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCC
Q 005001 549 --------DDELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSR 620 (720)
Q Consensus 549 --------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~ 620 (720)
+.++.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 168 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 243 (355)
T 2eu9_A 168 HKSCEEKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHE 243 (355)
T ss_dssp C-CCCEEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Confidence 56789999999999764332 234579999999999999999999999999999999999999998654
Q ss_pred CcchhhHHHhhccccccH-------------------------HHHHhhccc-ccCCCCChhHHHHHHHHHHHhcCCCCC
Q 005001 621 PRSEQSLVRWATPQLHDI-------------------------DALAKMVDP-ALNGMYPAKSLSRFADIIALCVQPEPE 674 (720)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~ 674 (720)
.......+.......... ........+ ..........+..+.+|+.+||+.||+
T Consensus 244 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 323 (355)
T 2eu9_A 244 NREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPA 323 (355)
T ss_dssp HHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTT
T ss_pred HHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChh
Confidence 332211111110000000 000000000 001112234566899999999999999
Q ss_pred CCCCHHHHHHH
Q 005001 675 FRPPMSEVVQA 685 (720)
Q Consensus 675 ~RPs~~ell~~ 685 (720)
+|||+.|++++
T Consensus 324 ~Rpt~~e~l~h 334 (355)
T 2eu9_A 324 QRITLAEALLH 334 (355)
T ss_dssp TSCCHHHHTTS
T ss_pred hCcCHHHHhcC
Confidence 99999999865
No 240
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=7.5e-38 Score=329.65 Aligned_cols=254 Identities=21% Similarity=0.341 Sum_probs=185.6
Q ss_pred HhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
..++|+..+.||+|+||.||+|.+. +|+.||+|++............+.++..+++.++||||+++++++...+..++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence 3467888999999999999999875 689999999976543333344455566678888999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEEecCCCCCEEeCCCCceEEcccCCCccC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHE-VCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~-~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
|||+ ++.+..+... ....+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||++...
T Consensus 103 ~e~~-~~~~~~l~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 175 (318)
T 2dyl_A 103 MELM-GTCAEKLKKR---MQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRL 175 (318)
T ss_dssp ECCC-SEEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred Eecc-CCcHHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhc
Confidence 9999 5566555542 24678999999999999999999998 5 8999999999999999999999999998765
Q ss_pred CCCCccccccccccccccCccccc-----cCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHH
Q 005001 566 PNTERQVSTQMVGAFGYSAPEFAL-----SGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDA 640 (720)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 640 (720)
.... ......||+.|+|||++. +..++.++||||||+++|||++|+.||........ .
T Consensus 176 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---------------~ 238 (318)
T 2dyl_A 176 VDDK--AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFE---------------V 238 (318)
T ss_dssp -------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHH---------------H
T ss_pred cCCc--cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHH---------------H
Confidence 4322 223457999999999994 55688999999999999999999999975432111 1
Q ss_pred HHhhcccc-cCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 641 LAKMVDPA-LNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 641 ~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
........ .........+..+.+++.+||+.||.+||++.+++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 239 LTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp HHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred HHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 11111111 0111112356778999999999999999999999975
No 241
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.3e-38 Score=336.01 Aligned_cols=247 Identities=21% Similarity=0.347 Sum_probs=201.7
Q ss_pred HHHHhcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccCh----HHHHHHHHHHHHhhcCC--CCCccccceEE
Q 005001 405 LQTATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSL----QEEDNFLEAVSNMSRLR--HPNIVTLAGYC 477 (720)
Q Consensus 405 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~--h~niv~l~~~~ 477 (720)
.....++|+..+.||+|+||.||+|.+ .+++.||+|++....... .....+.+|+.++++++ ||||+++++++
T Consensus 38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~ 117 (320)
T 3a99_A 38 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 117 (320)
T ss_dssp --CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEE
T ss_pred cCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEE
Confidence 334567899999999999999999976 468899999997543321 12244667888888885 69999999999
Q ss_pred eecCeEEEEEEecCC-CCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeC-CCCceE
Q 005001 478 AEHGQRLLVYEYVGN-GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD-DELNPH 555 (720)
Q Consensus 478 ~~~~~~~lV~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~-~~~~~k 555 (720)
...+..++|+|++.+ ++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.+|
T Consensus 118 ~~~~~~~lv~e~~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~k 190 (320)
T 3a99_A 118 ERPDSFVLILERPEPVQDLFDFITE----RGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELK 190 (320)
T ss_dssp ECSSEEEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEE
T ss_pred ecCCcEEEEEEcCCCCccHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEE
Confidence 999999999999976 899999873 46789999999999999999999999 999999999999999 789999
Q ss_pred EcccCCCccCCCCCccccccccccccccCccccccCCC-cccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccc
Q 005001 556 LSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIY-TVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQ 634 (720)
Q Consensus 556 l~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 634 (720)
|+|||++....... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||.... ..
T Consensus 191 L~Dfg~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-----~~------- 255 (320)
T 3a99_A 191 LIDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EI------- 255 (320)
T ss_dssp ECCCTTCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-----HH-------
T ss_pred EeeCcccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-----hh-------
Confidence 99999998764322 234579999999999988776 788999999999999999999996421 00
Q ss_pred cccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 635 LHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
... ....+...+.++.+++.+||+.||++||++.|++++
T Consensus 256 ------~~~------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 256 ------IRG------QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp ------HHC------CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ------hcc------cccccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 011233456778999999999999999999999874
No 242
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.1e-37 Score=336.14 Aligned_cols=263 Identities=17% Similarity=0.294 Sum_probs=200.1
Q ss_pred hcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHhhcCC-----------CCCccccceE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-----------HPNIVTLAGY 476 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~~~ 476 (720)
.++|...+.||+|+||.||+|.+ .+++.||+|++... ......+.+|+.++++++ ||||++++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~ 94 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 94 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC---ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence 35789999999999999999987 46899999999743 234566778888887775 8999999999
Q ss_pred EeecC----eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeC---
Q 005001 477 CAEHG----QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD--- 549 (720)
Q Consensus 477 ~~~~~----~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~--- 549 (720)
+...+ ..++||||+ +++|.+++... ....+++..+..++.||+.||+|||+++ +|+||||||+|||++
T Consensus 95 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~ 169 (373)
T 1q8y_A 95 FNHKGPNGVHVVMVFEVL-GENLLALIKKY--EHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVD 169 (373)
T ss_dssp EEEEETTEEEEEEEECCC-CEEHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEE
T ss_pred hhccCCCCceEEEEEecC-CCCHHHHHHHh--hccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccC
Confidence 87654 789999999 88999999743 2456899999999999999999999953 899999999999994
Q ss_pred ---CCCceEEcccCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcch--
Q 005001 550 ---DELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSE-- 624 (720)
Q Consensus 550 ---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~-- 624 (720)
..+.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 170 ~~~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 245 (373)
T 1q8y_A 170 SPENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTK 245 (373)
T ss_dssp TTTTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------C
T ss_pred CCcCcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCC
Confidence 4458999999999765432 2335799999999999999999999999999999999999999986542211
Q ss_pred --hhHHHhh--ccccccHH--------------------------HHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCC
Q 005001 625 --QSLVRWA--TPQLHDID--------------------------ALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPE 674 (720)
Q Consensus 625 --~~~~~~~--~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 674 (720)
....... ........ ...... .....++...+.++.+||.+||+.||+
T Consensus 246 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~ 323 (373)
T 1q8y_A 246 DDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVL--TEKYKFSKDEAKEISDFLSPMLQLDPR 323 (373)
T ss_dssp HHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHH--HHTTCCCHHHHHHHHHHHGGGGCSSTT
T ss_pred hHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhh--hhcccCCcchHHHHHHHHHHHhccCcc
Confidence 0000000 00000000 000000 011234567788999999999999999
Q ss_pred CCCCHHHHHHH
Q 005001 675 FRPPMSEVVQA 685 (720)
Q Consensus 675 ~RPs~~ell~~ 685 (720)
+|||+.|++++
T Consensus 324 ~Rpt~~ell~h 334 (373)
T 1q8y_A 324 KRADAGGLVNH 334 (373)
T ss_dssp TCBCHHHHHTC
T ss_pred ccCCHHHHhhC
Confidence 99999999975
No 243
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.3e-38 Score=331.54 Aligned_cols=247 Identities=23% Similarity=0.363 Sum_probs=193.8
Q ss_pred HHHHhcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccCh----HHHHHHHHHHHHhhcC----CCCCccccce
Q 005001 405 LQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL----QEEDNFLEAVSNMSRL----RHPNIVTLAG 475 (720)
Q Consensus 405 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l----~h~niv~l~~ 475 (720)
.+...++|+..+.||+|+||.||+|.+. +++.||+|++....... .....+.+|+.++.++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 3445678999999999999999999764 68899999997543321 1233455688888777 8999999999
Q ss_pred EEeecCeEEEEEEe-cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeC-CCCc
Q 005001 476 YCAEHGQRLLVYEY-VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD-DELN 553 (720)
Q Consensus 476 ~~~~~~~~~lV~e~-~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~-~~~~ 553 (720)
++...+..++|+|+ +.+++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 178 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITE----KGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGC 178 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTE
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCe
Confidence 99999999999999 789999999973 35689999999999999999999999 999999999999999 8899
Q ss_pred eEEcccCCCccCCCCCccccccccccccccCccccccCCC-cccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhc
Q 005001 554 PHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIY-TVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWAT 632 (720)
Q Consensus 554 ~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~ 632 (720)
+||+|||++....... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||.... .
T Consensus 179 ~kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~------ 244 (312)
T 2iwi_A 179 AKLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-----E------ 244 (312)
T ss_dssp EEECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-----H------
T ss_pred EEEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-----H------
Confidence 9999999998765432 234569999999999987776 458999999999999999999996421 0
Q ss_pred cccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 633 PQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
... .....+...+..+.+++.+||+.||++||++.|++++
T Consensus 245 -------~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 245 -------ILE------AELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp -------HHH------TCCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -------Hhh------hccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 0112344566788999999999999999999999975
No 244
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-37 Score=340.23 Aligned_cols=249 Identities=20% Similarity=0.276 Sum_probs=188.0
Q ss_pred hcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 487 (720)
..+|...+.||+|+||+||.....+++.||||++..... ..+.+|+++++.+ +||||+++++++.+.+..++||
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~ 97 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAI 97 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEE
Confidence 456888899999999997766667899999999965432 2245788999988 8999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC-----CCceEEcccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD-----ELNPHLSDCGLA 562 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~-----~~~~kl~Dfg~a 562 (720)
||+. |+|.+++... .....+..+..++.||+.||+|||+. +|+||||||+|||++. ...+||+|||++
T Consensus 98 E~~~-g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a 170 (432)
T 3p23_A 98 ELCA-ATLQEYVEQK---DFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLC 170 (432)
T ss_dssp ECCS-EEHHHHHHSS---SCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEE
T ss_pred ECCC-CCHHHHHHhc---CCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccce
Confidence 9996 5999999732 23445556778999999999999999 9999999999999953 335889999999
Q ss_pred ccCCCCCc--cccccccccccccCccccc---cCCCcccchhhhHHHHHHHHHh-CCCCCCCCCCcchhhHHHhhccccc
Q 005001 563 ALTPNTER--QVSTQMVGAFGYSAPEFAL---SGIYTVKSDVYSFGVVMLELLT-GRKPLDSSRPRSEQSLVRWATPQLH 636 (720)
Q Consensus 563 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~ 636 (720)
+....... .......||+.|+|||++. +..++.++|||||||++|||++ |..||..........
T Consensus 171 ~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~---------- 240 (432)
T 3p23_A 171 KKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI---------- 240 (432)
T ss_dssp ECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHH----------
T ss_pred eeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHH----------
Confidence 87653321 2234467999999999998 4567889999999999999999 899996432211100
Q ss_pred cHHHHHhhcccccC-CCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 637 DIDALAKMVDPALN-GMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 637 ~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.. ...... ...+...+..+.+||.+||+.||++||++.|++++
T Consensus 241 ----~~--~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 241 ----LL--GACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp ----HT--TCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ----Hh--ccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 00 000011 11123455668899999999999999999999953
No 245
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2.9e-37 Score=348.84 Aligned_cols=273 Identities=23% Similarity=0.336 Sum_probs=209.2
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEee------cC
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE------HG 481 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~ 481 (720)
.++|++.+.||+|+||.||+|.+. +|+.||+|++.... .......+.+|+.++++++||||+++++++.. .+
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL-SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC-CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 367999999999999999999764 68999999987543 45567789999999999999999999998755 66
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCc---eEEcc
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN---PHLSD 558 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~---~kl~D 558 (720)
..++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~-~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~D 167 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFE-NCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIID 167 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSS-CTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECS
T ss_pred eEEEEEEeCCCCCHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcc
Confidence 7899999999999999997432 234689999999999999999999999 9999999999999997765 99999
Q ss_pred cCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccH
Q 005001 559 CGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDI 638 (720)
Q Consensus 559 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 638 (720)
||++....... ......||+.|+|||++.+..++.++|||||||++|||++|..||...... ..|...... .
T Consensus 168 FG~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-----~~~~~~i~~-~ 239 (676)
T 3qa8_A 168 LGYAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP-----VQWHGKVRE-K 239 (676)
T ss_dssp CCCCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH-----HHSSTTCC---
T ss_pred ccccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch-----hhhhhhhhc-c
Confidence 99998764432 224467999999999999999999999999999999999999999754211 111000000 0
Q ss_pred HHHHhhc----------cc--ccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHH-----HHHHHHHHHHhhc
Q 005001 639 DALAKMV----------DP--ALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSE-----VVQALVRLVQRAS 694 (720)
Q Consensus 639 ~~~~~~~----------~~--~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e-----ll~~L~~~~~~~~ 694 (720)
....... .. ..........+..+.+++.+||+.||++||++.+ ..+.+.++++...
T Consensus 240 ~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~ki 312 (676)
T 3qa8_A 240 SNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLKL 312 (676)
T ss_dssp ----CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCCCE
T ss_pred cchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhccc
Confidence 0000000 00 0112234567889999999999999999999998 5677788777664
No 246
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.6e-36 Score=314.24 Aligned_cols=235 Identities=15% Similarity=0.135 Sum_probs=187.8
Q ss_pred hcCCCccceeccCCCcEEEEEEEc-CCcEEEEEEccccccC-hHHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
.++|++.+.||+|+||.||+|.+. +++.||+|++...... ......+.+|+..+.+++||||+++++++...+..|+|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 467999999999999999999876 4899999999865443 44557889999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||+++++|.++++. + ....++.+++.|++.||+|||+. +|+||||||+|||++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~-----~-~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------ 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADT-----S-PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------ 174 (286)
T ss_dssp EECCCEEEHHHHHTT-----C-CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC------
T ss_pred EEecCCCCHHHHHhc-----C-CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc------
Confidence 999999999999851 2 35667899999999999999999 99999999999999999999998543
Q ss_pred CCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhH-HHhhccccccHHHHHhhc
Q 005001 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSL-VRWATPQLHDIDALAKMV 645 (720)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 645 (720)
|++| ++.++|||||||++|||+||+.||........... ...........
T Consensus 175 ---------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~------- 225 (286)
T 3uqc_A 175 ---------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEP------- 225 (286)
T ss_dssp ---------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCH-------
T ss_pred ---------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCCh-------
Confidence 3333 68899999999999999999999987543221100 00000000000
Q ss_pred ccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhh
Q 005001 646 DPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRA 693 (720)
Q Consensus 646 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~L~~~~~~~ 693 (720)
.......+..+.+++.+||+.||++| |+.|+++.|+++....
T Consensus 226 -----~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 226 -----ADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp -----HHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred -----hhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 00123455678999999999999999 9999999998876543
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.6e-36 Score=352.23 Aligned_cols=243 Identities=22% Similarity=0.367 Sum_probs=197.0
Q ss_pred hcCCCccceeccCCCcEEEEEEEc--CCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEeecCe----
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFA--NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ---- 482 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~---- 482 (720)
.++|++.+.||+|+||.||+|.+. +|+.||||++.... .......+.+|+.++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG-DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC-CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 478999999999999999999875 58999999986532 34456678999999999999999999999987665
Q ss_pred -EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCC
Q 005001 483 -RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (720)
Q Consensus 483 -~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~ 561 (720)
.|+||||+++++|.+++. ..+++.++..++.||+.||.|||+. +|+||||||+|||++.+ .+||+|||+
T Consensus 158 ~~~lv~E~~~g~~L~~~~~------~~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKG------QKLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEEEECCCCEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred eeEEEEEeCCCCcHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEeccc
Confidence 799999999999998775 3799999999999999999999999 99999999999999986 999999999
Q ss_pred CccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHH
Q 005001 562 AALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDAL 641 (720)
Q Consensus 562 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (720)
++..... ....||+.|+|||++.+.. +.++|||||||++|||++|..||....... ..
T Consensus 228 a~~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~-----------~~----- 285 (681)
T 2pzi_A 228 VSRINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDG-----------LP----- 285 (681)
T ss_dssp CEETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSS-----------CC-----
T ss_pred chhcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccc-----------cc-----
Confidence 9866433 3457999999999987764 889999999999999999998886421100 00
Q ss_pred HhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCC-HHHHHHHHHHHHHh
Q 005001 642 AKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPP-MSEVVQALVRLVQR 692 (720)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~ell~~L~~~~~~ 692 (720)
........+..+.++|.+||+.||++||+ ++++.+.|..+...
T Consensus 286 --------~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~ 329 (681)
T 2pzi_A 286 --------EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLRE 329 (681)
T ss_dssp --------TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHH
T ss_pred --------ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHH
Confidence 00001123357889999999999999995 56666777766543
No 248
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=4e-36 Score=327.94 Aligned_cols=247 Identities=15% Similarity=0.179 Sum_probs=183.7
Q ss_pred HhcCCCccceeccCCCcEEEEEEE-cCCcEEEEEEccccc-cChHHHHHHHHHHHHhhcCCC-CCccccc----------
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAA-LSLQEEDNFLEAVSNMSRLRH-PNIVTLA---------- 474 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h-~niv~l~---------- 474 (720)
....|...++||+|+||.||+|.+ .+|+.||||++.... ......+.+.+|+.+++.++| +|.....
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence 344577788999999999999985 469999999987332 223345778899999999977 3321111
Q ss_pred -----------eEEee-----cCeEEEEEEecCCCCHHHHhhhc---cCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 005001 475 -----------GYCAE-----HGQRLLVYEYVGNGNLHDMLHFA---DDSSKNLTWNARVRVALGTARALEYLHEVCLPS 535 (720)
Q Consensus 475 -----------~~~~~-----~~~~~lV~e~~~~gsL~~~l~~~---~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~ 535 (720)
.++.. ....+++|+++ +++|.++++.. ......+++..+..++.|++.||+|||+. +
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 231 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G 231 (413)
T ss_dssp EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---C
Confidence 11111 12356777765 57999998533 22345678889999999999999999999 9
Q ss_pred cEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccccccccccccccCcccc----------ccCCCcccchhhhHHHH
Q 005001 536 VVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFA----------LSGIYTVKSDVYSFGVV 605 (720)
Q Consensus 536 iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DvwSlGv~ 605 (720)
|+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||+
T Consensus 232 iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvi 306 (413)
T 3dzo_A 232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLA 306 (413)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHH
T ss_pred cccCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHH
Confidence 999999999999999999999999998764332 344567 999999999 55568899999999999
Q ss_pred HHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcccccCCCCChhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 606 MLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 606 l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
+|||++|+.||......... ...+. .....+..+.+||.+||+.||++||++.+++++
T Consensus 307 l~elltg~~Pf~~~~~~~~~----------------~~~~~------~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 307 IYWIWCADLPNTDDAALGGS----------------EWIFR------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp HHHHHHSSCCCCTTGGGSCS----------------GGGGS------SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHHCCCCCCCcchhhhH----------------HHHHh------hcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 99999999999754321110 00111 011334678999999999999999998888654
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=3.3e-35 Score=306.74 Aligned_cols=227 Identities=21% Similarity=0.321 Sum_probs=178.0
Q ss_pred cCCCcc-ceeccCCCcEEEEEEE-cCCcEEEEEEccccccChHHHHHHHHHHHHh-hcCCCCCccccceEEee----cCe
Q 005001 410 NSFSQE-FLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNM-SRLRHPNIVTLAGYCAE----HGQ 482 (720)
Q Consensus 410 ~~y~~~-~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~----~~~ 482 (720)
++|... +.||+|+||.||+|.+ .+++.||+|++... ..+.+|+.++ +..+||||+++++++.. ...
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 89 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 89 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCce
Confidence 456665 7899999999999977 46899999998532 3456777776 55699999999999877 677
Q ss_pred EEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC---CCceEEccc
Q 005001 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD---ELNPHLSDC 559 (720)
Q Consensus 483 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~---~~~~kl~Df 559 (720)
.++||||+++|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Df 164 (299)
T 3m2w_A 90 LLIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 164 (299)
T ss_dssp EEEEECCCCSCBHHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred EEEEEeecCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEecc
Confidence 89999999999999999742 235799999999999999999999999 9999999999999998 789999999
Q ss_pred CCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCCCCCCcchhhHHHhhccccccHH
Q 005001 560 GLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRPRSEQSLVRWATPQLHDID 639 (720)
Q Consensus 560 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 639 (720)
|++.... +..++.++|||||||++|||++|+.||.......... ...
T Consensus 165 g~a~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~-------~~~--- 211 (299)
T 3m2w_A 165 GFAKETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP-------GMK--- 211 (299)
T ss_dssp TTCEECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------C-------CSC---
T ss_pred ccccccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhH-------HHH---
Confidence 9986432 2346789999999999999999999997543211000 000
Q ss_pred HHHhhcccccCCCCC----hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 005001 640 ALAKMVDPALNGMYP----AKSLSRFADIIALCVQPEPEFRPPMSEVVQA 685 (720)
Q Consensus 640 ~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~ell~~ 685 (720)
.... ......+ ...+.++.+++.+||+.||++||++.|++++
T Consensus 212 ---~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 212 ---TRIR-MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp ---CSSC-TTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---HHHh-hccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0000 0001112 2346789999999999999999999999986
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=3.1e-36 Score=320.03 Aligned_cols=244 Identities=15% Similarity=0.142 Sum_probs=182.3
Q ss_pred hcCCCccceeccCCCcEEEEEEEcCCcEEEEEEcccccc------ChHHHHHHHHHHHHhhcCC---------CCCcccc
Q 005001 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAAL------SLQEEDNFLEAVSNMSRLR---------HPNIVTL 473 (720)
Q Consensus 409 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~e~~~l~~l~---------h~niv~l 473 (720)
.++|+..+.||+|+||.||+|.+ +|+.||||++..... .......+.+|+.+++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35688899999999999999988 689999999975432 1223366777877777665 5555555
Q ss_pred ce-----------------EEee-------------cCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHH
Q 005001 474 AG-----------------YCAE-------------HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR 523 (720)
Q Consensus 474 ~~-----------------~~~~-------------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~ 523 (720)
.+ ++.+ .+..++||||+++|++.+.+. ...+++.++..++.||+.
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~-----~~~~~~~~~~~i~~qi~~ 172 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR-----TKLSSLATAKSILHQLTA 172 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT-----TTCCCHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH-----hcCCCHHHHHHHHHHHHH
Confidence 44 4433 678999999999997766664 367899999999999999
Q ss_pred HHHHHH-hcCCCCcEEecCCCCCEEeCCCC--------------------ceEEcccCCCccCCCCCccccccccccccc
Q 005001 524 ALEYLH-EVCLPSVVHRNFKSANILLDDEL--------------------NPHLSDCGLAALTPNTERQVSTQMVGAFGY 582 (720)
Q Consensus 524 ~L~~LH-~~~~~~iiH~Dlkp~NIll~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y 582 (720)
||+||| +. +|+||||||+|||++.++ .+||+|||+++.... ....||+.|
T Consensus 173 aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~------~~~~gt~~y 243 (336)
T 2vuw_A 173 SLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD------GIVVFCDVS 243 (336)
T ss_dssp HHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET------TEEECCCCT
T ss_pred HHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC------CcEEEeecc
Confidence 999999 88 999999999999999887 899999999986543 234799999
Q ss_pred cCccccccCCCcccchhhhHHHH-HHHHHhCCCCCCCCCCcchhhHHHhhccccccHHHHHhhcc--cccCCCCChhHHH
Q 005001 583 SAPEFALSGIYTVKSDVYSFGVV-MLELLTGRKPLDSSRPRSEQSLVRWATPQLHDIDALAKMVD--PALNGMYPAKSLS 659 (720)
Q Consensus 583 ~aPE~~~~~~~~~~~DvwSlGv~-l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 659 (720)
+|||++.+.. +.++||||+|++ .+++++|..||.... |.. .....+.+... .......+...+.
T Consensus 244 ~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~---------~~~---~~~~~~~~~~~~~~~~~~~~~~~~s~ 310 (336)
T 2vuw_A 244 MDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVL---------WLH---YLTDKMLKQMTFKTKCNTPAMKQIKR 310 (336)
T ss_dssp TCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHH---------HHH---HHHHHHHHTCCCSSCCCSHHHHHHHH
T ss_pred cChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchh---------hhh---HHHHhhhhhhccCcccchhhhhhcCH
Confidence 9999998776 899999998777 778888999884210 000 00001110000 0011111235778
Q ss_pred HHHHHHHHhcCCCCCCCCCHHHHH-HH
Q 005001 660 RFADIIALCVQPEPEFRPPMSEVV-QA 685 (720)
Q Consensus 660 ~l~~li~~cl~~dP~~RPs~~ell-~~ 685 (720)
++.+||++||+.| |++|++ ++
T Consensus 311 ~~~dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 311 KIQEFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHHHHHHGGGSS-----SHHHHHHHC
T ss_pred HHHHHHHHHhccC-----CHHHHHhcC
Confidence 8999999999976 898888 53
No 251
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.98 E-value=3.2e-32 Score=285.79 Aligned_cols=221 Identities=26% Similarity=0.442 Sum_probs=201.3
Q ss_pred CCChHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCceeEecC----CCEEEEEcCCCCCcc--cccccccCCCCCCE
Q 005001 38 TTDSSDVQALQVLYTSLNSPSVLTNWKGNEGDPCGESWKGVACEG----SAVVSIDISGLGLSG--TMGYLLSDLLSLRK 111 (720)
Q Consensus 38 ~~~~~d~~al~~~~~~~~~~~~l~~w~~~~~~~c~~~w~gv~c~~----~~v~~l~l~~~~l~g--~~~~~l~~l~~L~~ 111 (720)
.|.+.|.+||++||+++.+|..+.+|.. +.+||.+.|.||+|+. ++|+.|+|++|+++| .+|..|+++++|++
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~-~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~ 80 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNF 80 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCT-TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSE
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCC-CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCe
Confidence 4688999999999999998888899975 3577755699999985 689999999999999 99999999999999
Q ss_pred EEccC-CCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEEccccccccccccccCCCCCCCeeecCCCc
Q 005001 112 FDLSG-NSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNN 188 (720)
Q Consensus 112 L~L~~-N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 188 (720)
|+|++ |.+++.+|..+. ++|++|+|++|++++.+|..+.++++|++|+|++|.+++.+|..|+.+++|++|+|++|+
T Consensus 81 L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 160 (313)
T 1ogq_A 81 LYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR 160 (313)
T ss_dssp EEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSC
T ss_pred eeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCc
Confidence 99995 999999998876 899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCccccCCC-CCCeeEeccccccccccc-cCCCCcCeEEccCccCcccCcccc---cccceeeecCCcCCCC
Q 005001 189 FSGDLPNSFISLS-NISSLYLQNNQVTGSLNV-FSGLPLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDNG 259 (720)
Q Consensus 189 l~g~~p~~~~~l~-~L~~L~l~~N~l~~~~~~-~~~~~L~~l~l~~N~l~g~ip~~l---~~l~~l~l~~n~~~~~ 259 (720)
++|.+|..++.++ +|++|+|++|++++.++. +...+|+.|+|++|++++.+|..+ .+|+.|++.+|.+...
T Consensus 161 l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 236 (313)
T 1ogq_A 161 ISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFD 236 (313)
T ss_dssp CEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCB
T ss_pred ccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeee
Confidence 9999999999998 999999999999987653 444569999999999999998765 5678899999998643
No 252
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=1.3e-29 Score=286.13 Aligned_cols=187 Identities=16% Similarity=0.101 Sum_probs=131.8
Q ss_pred eccCCCcEEEEEE-EcCCcEEEEEEcccccc--------ChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEEEE
Q 005001 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAAL--------SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVY 487 (720)
Q Consensus 418 lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~--------~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 487 (720)
.+.|++|.+..++ .--|+.|++|.+..... .....++|.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 5667777666653 33588999999865421 123346799999999999 7999999999999999999999
Q ss_pred EecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCC
Q 005001 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (720)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 567 (720)
||++|++|.+++. ..++++.. +|+.||+.||+|+|++ |||||||||+|||++.+|.+||+|||+|+....
T Consensus 322 Eyv~G~~L~d~i~----~~~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~ 391 (569)
T 4azs_A 322 EKLPGRLLSDMLA----AGEEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ 391 (569)
T ss_dssp ECCCSEEHHHHHH----TTCCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred ecCCCCcHHHHHH----hCCCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence 9999999999997 34566654 5889999999999999 999999999999999999999999999987654
Q ss_pred CCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCC
Q 005001 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPL 616 (720)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf 616 (720)
.. ......+||++|||||++.+. +..++|+||+|++++++.++..++
T Consensus 392 ~~-~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 392 DC-SWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp ---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CC-ccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccchh
Confidence 33 223456899999999998764 577899999999988876655443
No 253
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.95 E-value=1.5e-28 Score=288.16 Aligned_cols=80 Identities=19% Similarity=0.416 Sum_probs=69.6
Q ss_pred CChHHHHHHHHHHHhcCCCCCCCCCCCCC----CCCCCCCC------------ceeEecC-CCEEEEEcCCCCCcccccc
Q 005001 39 TDSSDVQALQVLYTSLNSPSVLTNWKGNE----GDPCGESW------------KGVACEG-SAVVSIDISGLGLSGTMGY 101 (720)
Q Consensus 39 ~~~~d~~al~~~~~~~~~~~~l~~w~~~~----~~~c~~~w------------~gv~c~~-~~v~~l~l~~~~l~g~~~~ 101 (720)
+...|.+||++||+++++| +|+.+. .+||+|+| .||+|+. ++|+.|+|++++|.|.+|+
T Consensus 266 ~~~~d~~ALl~~k~~l~~~----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip~ 341 (876)
T 4ecn_A 266 EYIKDYKALKAIWEALDGK----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPD 341 (876)
T ss_dssp HHHHHHHHHHHHHHHTTGG----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEECG
T ss_pred cchHHHHHHHHHHHHcCCC----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCch
Confidence 3467999999999999887 786553 46755699 9999984 7999999999999999999
Q ss_pred cccCCCCCCEEEc-cCCCCCCC
Q 005001 102 LLSDLLSLRKFDL-SGNSIHDT 122 (720)
Q Consensus 102 ~l~~l~~L~~L~L-~~N~l~~~ 122 (720)
.|++|++|++|+| ++|.++|.
T Consensus 342 ~l~~L~~L~~LdLss~N~lsG~ 363 (876)
T 4ecn_A 342 AIGQLTELKVLSFGTHSETVSG 363 (876)
T ss_dssp GGGGCTTCCEEESCCTTHHHHT
T ss_pred HHhccccceEeeeccccccccc
Confidence 9999999999999 88877665
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.95 E-value=1e-27 Score=282.33 Aligned_cols=219 Identities=25% Similarity=0.330 Sum_probs=141.4
Q ss_pred hccCCChHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCceeEecCCCEEEEEcCCCCCccc---ccccc--------
Q 005001 35 VQCTTDSSDVQALQVLYTSLNSPSVLTNWKGNEGDPCGESWKGVACEGSAVVSIDISGLGLSGT---MGYLL-------- 103 (720)
Q Consensus 35 ~~~~~~~~d~~al~~~~~~~~~~~~l~~w~~~~~~~c~~~w~gv~c~~~~v~~l~l~~~~l~g~---~~~~l-------- 103 (720)
+++.+.+.|++||++||+++.||..+++|.. +.+|| .|+||+|+.++|+.|+|+++++.|. +++.+
T Consensus 5 ~~~~~~~~~~~all~~k~~~~~~~~l~~W~~-~~~~C--~w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~ 81 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLPDKNLLPDWSS-NKNPC--TFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLES 81 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCSCTTSSTTCCT-TSCGG--GSTTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCE
T ss_pred ccccCCHHHHHHHHHHHhhCCCcccccCCCC-CCCCc--CCcceEECCCcEEEEECCCCCcCCccCccChhHhccCcccc
Confidence 3444567899999999999998878899973 34666 8999999988999999999999998 66544
Q ss_pred ---------------cCCCCCCEEEccCCCCCCCCCC--CCC--CccceeccccccCcCCCCccc-cccCCccEEEcccc
Q 005001 104 ---------------SDLLSLRKFDLSGNSIHDTIPY--QLP--PNLTSLNLASNNFSGNLPYSI-ASMVSLSYLNVSRN 163 (720)
Q Consensus 104 ---------------~~l~~L~~L~L~~N~l~~~~p~--~~~--~~L~~L~L~~N~l~g~~p~~~-~~l~~L~~L~L~~N 163 (720)
+++++|++|||++|.++|.+|. .+. ++|++|+|++|.+++.+|..+ .++++|++|+|++|
T Consensus 82 l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n 161 (768)
T 3rgz_A 82 LFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSAN 161 (768)
T ss_dssp EECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSS
T ss_pred cCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCC
Confidence 4555555555555555555554 333 455555555555555555444 45555555555555
Q ss_pred ccccccccc---cCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCC-CCcCeEEccCccCcccC
Q 005001 164 SLTQSIGDI---FGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSG-LPLTTLNVANNHFSGWI 239 (720)
Q Consensus 164 ~l~~~~p~~---~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~l~l~~N~l~g~i 239 (720)
++++..|.. +.++++|++|+|++|++++.+|. ..+++|++|+|++|++++.++.+.. .+|++|+|++|+++|.+
T Consensus 162 ~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~ 239 (768)
T 3rgz_A 162 SISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDF 239 (768)
T ss_dssp CCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSCCCSCH
T ss_pred ccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcccccCCCCCEEECcCCcCCCcc
Confidence 555555544 55555566666666665554442 5566666666666666665554333 33777777777777666
Q ss_pred cccc---cccceeeecCCcCCC
Q 005001 240 PREL---ISIRTFIYDGNSFDN 258 (720)
Q Consensus 240 p~~l---~~l~~l~l~~n~~~~ 258 (720)
|..+ .+|+.|++.+|.+..
T Consensus 240 ~~~l~~l~~L~~L~Ls~n~l~~ 261 (768)
T 3rgz_A 240 SRAISTCTELKLLNISSNQFVG 261 (768)
T ss_dssp HHHTTTCSSCCEEECCSSCCEE
T ss_pred cHHHhcCCCCCEEECCCCcccC
Confidence 6544 345666677776653
No 255
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.94 E-value=5.9e-28 Score=277.99 Aligned_cols=213 Identities=18% Similarity=0.312 Sum_probs=178.9
Q ss_pred ChHHHHHHHHHHHhcCCCCCC---------CCCCCCCCCCCCCCC---ceeEecC-CCEEEEEcCCCCCcccccccccCC
Q 005001 40 DSSDVQALQVLYTSLNSPSVL---------TNWKGNEGDPCGESW---KGVACEG-SAVVSIDISGLGLSGTMGYLLSDL 106 (720)
Q Consensus 40 ~~~d~~al~~~~~~~~~~~~l---------~~w~~~~~~~c~~~w---~gv~c~~-~~v~~l~l~~~~l~g~~~~~l~~l 106 (720)
...|.+||.+++.++++++|- .+|+.+ .++| .| .||+|+. ++|+.|+|++++++|.+|++|++|
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~-~~~c--~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L 104 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN-KELD--MWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQL 104 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCCS-SCGG--GTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGC
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC-CCcc--cccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcC
Confidence 357999999999999877542 379754 4666 89 9999975 699999999999999999999999
Q ss_pred CCCCEEEccCCCC-------------------------------------------------------------------
Q 005001 107 LSLRKFDLSGNSI------------------------------------------------------------------- 119 (720)
Q Consensus 107 ~~L~~L~L~~N~l------------------------------------------------------------------- 119 (720)
++|++|+|++|.+
T Consensus 105 ~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~ 184 (636)
T 4eco_A 105 TELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLK 184 (636)
T ss_dssp TTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCC
T ss_pred ccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchh
Confidence 9999999999944
Q ss_pred -----------CCCCCCCCC--CccceeccccccCcCC-----------------CCcccc--ccCCccEEEcccccccc
Q 005001 120 -----------HDTIPYQLP--PNLTSLNLASNNFSGN-----------------LPYSIA--SMVSLSYLNVSRNSLTQ 167 (720)
Q Consensus 120 -----------~~~~p~~~~--~~L~~L~L~~N~l~g~-----------------~p~~~~--~l~~L~~L~L~~N~l~~ 167 (720)
+| +|..+. ++|++|+|++|+|+|. +|..++ ++++|++|+|++|++.|
T Consensus 185 ~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~ 263 (636)
T 4eco_A 185 DTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLT 263 (636)
T ss_dssp TTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCS
T ss_pred hhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCc
Confidence 34 666664 7899999999999986 899988 99999999999999999
Q ss_pred ccccccCCCCCCCeeecCCCc-ccC-CCCccccCC------CCCCeeEecccccccccc--ccCC-CCcCeEEccCccCc
Q 005001 168 SIGDIFGNLAGLATLDLSFNN-FSG-DLPNSFISL------SNISSLYLQNNQVTGSLN--VFSG-LPLTTLNVANNHFS 236 (720)
Q Consensus 168 ~~p~~~~~l~~L~~L~l~~N~-l~g-~~p~~~~~l------~~L~~L~l~~N~l~~~~~--~~~~-~~L~~l~l~~N~l~ 236 (720)
.+|..|+++++|++|+|++|+ ++| .+|..++.+ ++|++|+|++|+|+..+. .+.. .+|+.|+|++|+++
T Consensus 264 ~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L~~L~L~~N~l~ 343 (636)
T 4eco_A 264 KLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLE 343 (636)
T ss_dssp SCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTCCEEECCSCCCE
T ss_pred cChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccCCCCCEEeCcCCcCc
Confidence 999999999999999999998 888 888888776 889999999999984333 3444 45999999999999
Q ss_pred ccCcccc---cccceeeecCCcCC
Q 005001 237 GWIPREL---ISIRTFIYDGNSFD 257 (720)
Q Consensus 237 g~ip~~l---~~l~~l~l~~n~~~ 257 (720)
|.+| .+ .+|+.|++.+|.+.
T Consensus 344 g~ip-~~~~l~~L~~L~L~~N~l~ 366 (636)
T 4eco_A 344 GKLP-AFGSEIKLASLNLAYNQIT 366 (636)
T ss_dssp EECC-CCEEEEEESEEECCSSEEE
T ss_pred cchh-hhCCCCCCCEEECCCCccc
Confidence 8888 55 46777888888877
No 256
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.94 E-value=6.6e-27 Score=246.89 Aligned_cols=215 Identities=19% Similarity=0.249 Sum_probs=186.1
Q ss_pred CChHHHHHHHHHHHhcC-CC-CCCCCCC---CCCCCCCCCCCceeEecC----------CCEEEEEcCCCCCcccccccc
Q 005001 39 TDSSDVQALQVLYTSLN-SP-SVLTNWK---GNEGDPCGESWKGVACEG----------SAVVSIDISGLGLSGTMGYLL 103 (720)
Q Consensus 39 ~~~~d~~al~~~~~~~~-~~-~~l~~w~---~~~~~~c~~~w~gv~c~~----------~~v~~l~l~~~~l~g~~~~~l 103 (720)
+..+|.+||++||+++. ++ .++.+|. ....++| .|.|+.|+. .+|+.|+|++|+++ .+|..+
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~--~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l 100 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIE--TRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQA 100 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSC--CSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCG
T ss_pred cCchHHHHHHHHHHhccCCchhhhhhhccccccccccc--ccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhh
Confidence 44679999999999883 44 3678894 2334555 799999952 68999999999998 788889
Q ss_pred cCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEEccccccccccccccCC------
Q 005001 104 SDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGN------ 175 (720)
Q Consensus 104 ~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~------ 175 (720)
+++++|++|+|++|.|+ .+|..+. ++|++|+|++|+|+ .+|..++++++|++|+|++|++.+.+|..++.
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~ 178 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGE 178 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCC
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhh
Confidence 99999999999999999 8998776 89999999999999 88999999999999999999999999988765
Q ss_pred ---CCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCC-CCcCeEEccCccCcccCcccc---cccce
Q 005001 176 ---LAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSG-LPLTTLNVANNHFSGWIPREL---ISIRT 248 (720)
Q Consensus 176 ---l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~l~l~~N~l~g~ip~~l---~~l~~ 248 (720)
+++|++|+|++|+|+ .+|..++.+++|++|+|++|+|++.++.+.. .+|+.|+|++|++.+.+|..+ .+|+.
T Consensus 179 ~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~ 257 (328)
T 4fcg_A 179 HQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKR 257 (328)
T ss_dssp EEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCE
T ss_pred hccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCE
Confidence 999999999999999 8999999999999999999999987665544 459999999999999999865 46778
Q ss_pred eeecCCcCCCC
Q 005001 249 FIYDGNSFDNG 259 (720)
Q Consensus 249 l~l~~n~~~~~ 259 (720)
|++.+|++...
T Consensus 258 L~L~~n~~~~~ 268 (328)
T 4fcg_A 258 LILKDCSNLLT 268 (328)
T ss_dssp EECTTCTTCCB
T ss_pred EECCCCCchhh
Confidence 89999877543
No 257
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=3.6e-26 Score=256.60 Aligned_cols=187 Identities=13% Similarity=0.188 Sum_probs=148.3
Q ss_pred CccceeccCCCcEEEEEEEcCCcEEEEEEccccccCh------HHHHHHHHHHHHhhcCCCCCccccceEEeecCeEEEE
Q 005001 413 SQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSL------QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 413 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 486 (720)
...+.||+|+||.||+|.. .++.+++|+........ ...+.+.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4466899999999999944 57788888765433221 1235589999999999999999877777788888999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCC
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 566 (720)
|||+++++|.++++. +..++.|+++||+|||++ +|+||||||+|||++. .+||+|||+++...
T Consensus 418 mE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~ 480 (540)
T 3en9_A 418 MSYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISN 480 (540)
T ss_dssp EECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred EECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECC
Confidence 999999999999962 568999999999999999 9999999999999999 99999999998875
Q ss_pred CCCccc------cccccccccccCcccccc--CCCcccchhhhHHHHHHHHHhCCCCCC
Q 005001 567 NTERQV------STQMVGAFGYSAPEFALS--GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (720)
Q Consensus 567 ~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~~pf~ 617 (720)
...... .....||+.|||||++.. ..|+..+|+|+..+-..+.+.++-+|.
T Consensus 481 ~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 481 LDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 432221 235689999999999987 668889999999999888888777663
No 258
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.89 E-value=1e-23 Score=248.22 Aligned_cols=176 Identities=26% Similarity=0.393 Sum_probs=109.6
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEEc
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 160 (720)
..++.|+|++|+++|.+|..++++++|++|+|++|+++|.+|..+. ++|++|+|++|+++|.+|..++++++|++|+|
T Consensus 466 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 545 (768)
T 3rgz_A 466 KTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDL 545 (768)
T ss_dssp TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEEC
T ss_pred CCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEEC
Confidence 4566777777777777777777777777777777777777766554 56666666666666666666666666666666
Q ss_pred ccccccccccccc-------------------------------------------------------------------
Q 005001 161 SRNSLTQSIGDIF------------------------------------------------------------------- 173 (720)
Q Consensus 161 ~~N~l~~~~p~~~------------------------------------------------------------------- 173 (720)
++|.++|.+|..+
T Consensus 546 s~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~ 625 (768)
T 3rgz_A 546 NTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTS 625 (768)
T ss_dssp CSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECC
T ss_pred CCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCc
Confidence 6666665555432
Q ss_pred ---CCCCCCCeeecCCCcccCCCCccccCCCCCCeeEecccccccccccc-C-CCCcCeEEccCccCcccCccccc---c
Q 005001 174 ---GNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVF-S-GLPLTTLNVANNHFSGWIPRELI---S 245 (720)
Q Consensus 174 ---~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~-~~~L~~l~l~~N~l~g~ip~~l~---~ 245 (720)
+.+++|+.|||++|+|+|.+|..++.+++|+.|+|++|+|+|.+|.. . ..+|+.|||++|+++|.||..+. +
T Consensus 626 ~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~ 705 (768)
T 3rgz_A 626 PTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTM 705 (768)
T ss_dssp CSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCC
T ss_pred hhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCC
Confidence 22345666666666666666666666666666666666666655432 2 23366666666666666665543 3
Q ss_pred cceeeecCCcCCC
Q 005001 246 IRTFIYDGNSFDN 258 (720)
Q Consensus 246 l~~l~l~~n~~~~ 258 (720)
|+.|++++|++.+
T Consensus 706 L~~L~ls~N~l~g 718 (768)
T 3rgz_A 706 LTEIDLSNNNLSG 718 (768)
T ss_dssp CSEEECCSSEEEE
T ss_pred CCEEECcCCcccc
Confidence 4455666666554
No 259
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.89 E-value=4e-23 Score=203.02 Aligned_cols=175 Identities=21% Similarity=0.251 Sum_probs=152.5
Q ss_pred CCCCCCCceeEecCC-----------CEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--Cccceec
Q 005001 69 DPCGESWKGVACEGS-----------AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLN 135 (720)
Q Consensus 69 ~~c~~~w~gv~c~~~-----------~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~ 135 (720)
+.|.|.|.+|.|+.. +++.|+|++|++++..+..+..+++|++|+|++|+|++..+..+. ++|++|+
T Consensus 3 ~~C~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 82 (208)
T 2o6s_A 3 SRCSCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLN 82 (208)
T ss_dssp TTCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEE
Confidence 456679999999742 588999999999988888899999999999999999965554443 8999999
Q ss_pred cccccCcCCCCccccccCCccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccc
Q 005001 136 LASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTG 215 (720)
Q Consensus 136 L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~ 215 (720)
|++|+|++..+..+.++++|++|+|++|+|++..+..|..+++|++|+|++|++++..+..+..+++|++|+|++|.+.+
T Consensus 83 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 162 (208)
T 2o6s_A 83 LSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 162 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC
T ss_pred CCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec
Confidence 99999997777778999999999999999998888889999999999999999997666678999999999999999887
Q ss_pred cccccCCCCcCeEEccCccCcccCcccccccce
Q 005001 216 SLNVFSGLPLTTLNVANNHFSGWIPRELISIRT 248 (720)
Q Consensus 216 ~~~~~~~~~L~~l~l~~N~l~g~ip~~l~~l~~ 248 (720)
..+ .|+.|+++.|+++|.+|+.++++..
T Consensus 163 ~~~-----~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 TCP-----GIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp CTT-----TTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred CCC-----CHHHHHHHHHhCCceeeccCccccC
Confidence 654 4889999999999999998887654
No 260
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.88 E-value=4e-22 Score=204.30 Aligned_cols=177 Identities=22% Similarity=0.253 Sum_probs=136.2
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCC--CCccceeccccccCcCCCCccccccCCccEEEcc
Q 005001 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQL--PPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (720)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~--~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~ 161 (720)
.++.|+|++|++++..+..|.++++|++|+|++|.|++..+..+ .++|++|+|++|++++..+..+.++++|++|+|+
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 46778888888887777788888888888888888884333332 2788888888888887666777888888888888
Q ss_pred ccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccc-cCC-CCcCeEEccCccCcccC
Q 005001 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVANNHFSGWI 239 (720)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~l~l~~N~l~g~i 239 (720)
+|++++..+..|+.+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+. +.. .+|+.|+|++|+|++..
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 197 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVP 197 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCC
Confidence 8888888778888888888888888888865555678888888888888888876653 332 45888888888888654
Q ss_pred cccc---cccceeeecCCcCCCCC
Q 005001 240 PREL---ISIRTFIYDGNSFDNGP 260 (720)
Q Consensus 240 p~~l---~~l~~l~l~~n~~~~~~ 260 (720)
+..+ .+|+.|++.+|+|.|..
T Consensus 198 ~~~~~~l~~L~~L~l~~N~~~c~c 221 (270)
T 2o6q_A 198 EGAFDSLEKLKMLQLQENPWDCTC 221 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCBCCSS
T ss_pred HHHhccccCCCEEEecCCCeeCCC
Confidence 4433 56778888888887653
No 261
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.88 E-value=3.8e-23 Score=216.67 Aligned_cols=175 Identities=24% Similarity=0.388 Sum_probs=126.7
Q ss_pred CCEEEEEcCC-CCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEE
Q 005001 83 SAVVSIDISG-LGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLN 159 (720)
Q Consensus 83 ~~v~~l~l~~-~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 159 (720)
.+++.|+|++ |++.+.+|..|+++++|++|+|++|++++.+|..+. ++|++|+|++|++++.+|..+.++++|++|+
T Consensus 76 ~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 155 (313)
T 1ogq_A 76 PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGIT 155 (313)
T ss_dssp TTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEE
T ss_pred CCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEE
Confidence 4688889984 888888888888888999999998888888887665 7888888888888888888888888888888
Q ss_pred ccccccccccccccCCCC-CCCeeecCCCcccCCCCccccCCCCCCeeEeccccccc-----------------------
Q 005001 160 VSRNSLTQSIGDIFGNLA-GLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTG----------------------- 215 (720)
Q Consensus 160 L~~N~l~~~~p~~~~~l~-~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~----------------------- 215 (720)
|++|++++.+|..++.++ +|++|+|++|+++|.+|..+..++ |++|+|++|+|++
T Consensus 156 L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 234 (313)
T 1ogq_A 156 FDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLA 234 (313)
T ss_dssp CCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEEC
T ss_pred CcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCcee
Confidence 888888888888888777 777777777777766666555554 5555555555544
Q ss_pred -cccccCC-CCcCeEEccCccCcccCcccc---cccceeeecCCcCCC
Q 005001 216 -SLNVFSG-LPLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDN 258 (720)
Q Consensus 216 -~~~~~~~-~~L~~l~l~~N~l~g~ip~~l---~~l~~l~l~~n~~~~ 258 (720)
.++.+.. .+|+.|+|++|+|+|.+|..+ .+|+.|++.+|++..
T Consensus 235 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 282 (313)
T 1ogq_A 235 FDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCG 282 (313)
T ss_dssp CBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEE
T ss_pred eecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccc
Confidence 3333222 236666666666666666544 345556666666653
No 262
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.88 E-value=9.1e-23 Score=209.88 Aligned_cols=163 Identities=14% Similarity=0.080 Sum_probs=127.1
Q ss_pred HHHhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccCh----------------HHHHHHHHHHHHhhcCCCCC
Q 005001 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSL----------------QEEDNFLEAVSNMSRLRHPN 469 (720)
Q Consensus 406 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~----------------~~~~~~~~e~~~l~~l~h~n 469 (720)
......|...+.||+|+||.||+|.+.+|+.||+|.++...... .....+.+|+.++++++ |
T Consensus 86 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~ 163 (282)
T 1zar_A 86 VRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G 163 (282)
T ss_dssp HHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T
T ss_pred HhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C
Confidence 33345567779999999999999988779999999996432211 23567889999999998 5
Q ss_pred ccccceEEeecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeC
Q 005001 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD 549 (720)
Q Consensus 470 iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~ 549 (720)
+++.+++.. +..++||||+++++|.+ +.. .....++.|++.||+|||+. +|+||||||+|||++
T Consensus 164 -~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~ 227 (282)
T 1zar_A 164 -LAVPKVYAW-EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS 227 (282)
T ss_dssp -SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE
T ss_pred -CCcCeEEec-cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE
Confidence 777776544 56699999999999988 431 22457999999999999999 999999999999999
Q ss_pred CCCceEEcccCCCccCCCCCccccccccccccccCcccccc----------CCCcccchhhh
Q 005001 550 DELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALS----------GIYTVKSDVYS 601 (720)
Q Consensus 550 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~----------~~~~~~~DvwS 601 (720)
++.+||+|||+++. +..|+|||++.+ ..|...+|+|.
T Consensus 228 -~~~vkl~DFG~a~~--------------~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 228 -EEGIWIIDFPQSVE--------------VGEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp -TTEEEECCCTTCEE--------------TTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred -CCcEEEEECCCCeE--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 99999999999863 344788998754 33455556654
No 263
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=4.7e-22 Score=201.45 Aligned_cols=182 Identities=22% Similarity=0.266 Sum_probs=155.6
Q ss_pred CCceeEecCCCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccc
Q 005001 74 SWKGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIAS 151 (720)
Q Consensus 74 ~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~ 151 (720)
.|.|.+|.. ..+.+++++++++. +|..+. +.|+.|+|++|++++..|..+. ++|++|+|++|+|++..|..+.+
T Consensus 6 ~~~gC~C~~-~~~~l~~~~~~l~~-~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 81 (251)
T 3m19_A 6 TVTGCTCNE-GKKEVDCQGKSLDS-VPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDD 81 (251)
T ss_dssp HHHSSEEEG-GGTEEECTTCCCSS-CCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTT
T ss_pred CCCceEcCC-CCeEEecCCCCccc-cCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhcc
Confidence 799999953 24468999999984 555554 5899999999999987776665 89999999999999888888999
Q ss_pred cCCccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccc-cCC-CCcCeEE
Q 005001 152 MVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLN 229 (720)
Q Consensus 152 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~l~ 229 (720)
+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+. +.. .+|+.|+
T Consensus 82 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 161 (251)
T 3m19_A 82 LTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLS 161 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEE
Confidence 99999999999999988888999999999999999999976666788999999999999999987763 433 4699999
Q ss_pred ccCccCcccCcccc---cccceeeecCCcCCCC
Q 005001 230 VANNHFSGWIPREL---ISIRTFIYDGNSFDNG 259 (720)
Q Consensus 230 l~~N~l~g~ip~~l---~~l~~l~l~~n~~~~~ 259 (720)
|++|+|++..|..+ .+|+.|++.+|++.|.
T Consensus 162 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 162 LSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 99999997766554 5788899999999876
No 264
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.86 E-value=2.5e-21 Score=199.00 Aligned_cols=176 Identities=20% Similarity=0.234 Sum_probs=144.5
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEEcc
Q 005001 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (720)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~ 161 (720)
.++.|+|++|++++..+..|.++++|++|+|++|.+++..+..+. ++|++|+|++|++++..+..+.++++|++|+|+
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 588999999999988888999999999999999999966665554 899999999999998888899999999999999
Q ss_pred ccccccccccccCCCCCCCeeecCCCcccC-CCCccccCCCCCCeeEeccccccccccc-cCC-CCcC----eEEccCcc
Q 005001 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSG-DLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLT----TLNVANNH 234 (720)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~----~l~l~~N~ 234 (720)
+|++++..+..++.+++|++|+|++|++++ .+|..++.+++|++|+|++|+|++..+. +.. .+|+ .|++++|+
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 999998888889999999999999999986 3689999999999999999999885432 111 1233 67777777
Q ss_pred CcccCccccc--ccceeeecCCcCCCC
Q 005001 235 FSGWIPRELI--SIRTFIYDGNSFDNG 259 (720)
Q Consensus 235 l~g~ip~~l~--~l~~l~l~~n~~~~~ 259 (720)
+++..+..+. +++.|++.+|.+...
T Consensus 189 l~~~~~~~~~~~~L~~L~L~~n~l~~~ 215 (276)
T 2z62_A 189 MNFIQPGAFKEIRLKELALDTNQLKSV 215 (276)
T ss_dssp CCEECTTSSCSCCEEEEECCSSCCSCC
T ss_pred ccccCccccCCCcccEEECCCCceeec
Confidence 7755444332 566677777776644
No 265
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.86 E-value=4.1e-21 Score=198.41 Aligned_cols=177 Identities=21% Similarity=0.241 Sum_probs=156.9
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--Cccceecccccc-CcCCCCccccccCCccEEEc
Q 005001 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNN-FSGNLPYSIASMVSLSYLNV 160 (720)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~-l~g~~p~~~~~l~~L~~L~L 160 (720)
.++.|+|++|++++..+..|.++++|++|+|++|.+++..|..+. ++|++|+|++|. +++..|..+.++++|++|+|
T Consensus 33 ~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l 112 (285)
T 1ozn_A 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112 (285)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEEC
Confidence 588999999999998888999999999999999999987777765 899999999997 88666889999999999999
Q ss_pred cccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccc-cCC-CCcCeEEccCccCccc
Q 005001 161 SRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVANNHFSGW 238 (720)
Q Consensus 161 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~l~l~~N~l~g~ 238 (720)
++|++++..|..|..+++|++|+|++|++++..+..|+.+++|++|+|++|+|++..+. +.. .+|+.|+|++|++++.
T Consensus 113 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 192 (285)
T 1ozn_A 113 DRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHV 192 (285)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccccc
Confidence 99999998899999999999999999999977777799999999999999999987653 333 4699999999999988
Q ss_pred Ccccc---cccceeeecCCcCCCCC
Q 005001 239 IPREL---ISIRTFIYDGNSFDNGP 260 (720)
Q Consensus 239 ip~~l---~~l~~l~l~~n~~~~~~ 260 (720)
.|..+ .+|+.|++.+|.+...+
T Consensus 193 ~~~~~~~l~~L~~L~l~~n~l~~~~ 217 (285)
T 1ozn_A 193 HPHAFRDLGRLMTLYLFANNLSALP 217 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CHhHccCcccccEeeCCCCcCCcCC
Confidence 88766 47888999999887543
No 266
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.86 E-value=3.8e-21 Score=198.89 Aligned_cols=175 Identities=22% Similarity=0.188 Sum_probs=156.0
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEccc
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 162 (720)
..++.|+|++|++++..+..|.++++|++|+|++|.|++..+....++|++|+|++|+|+ .+|..+.++++|++|+|++
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~ 109 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSF 109 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECCSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCS
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCCCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCC
Confidence 368899999999999999999999999999999999996555555589999999999999 7899999999999999999
Q ss_pred cccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEecccccccccccc-C-CCCcCeEEccCccCcccCc
Q 005001 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVF-S-GLPLTTLNVANNHFSGWIP 240 (720)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~-~~~L~~l~l~~N~l~g~ip 240 (720)
|+|++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+.. . ..+|+.|+|++|+|+ .+|
T Consensus 110 N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip 188 (290)
T 1p9a_G 110 NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIP 188 (290)
T ss_dssp SCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCC
T ss_pred CcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccC
Confidence 9999988899999999999999999999777777889999999999999999866543 3 356999999999999 677
Q ss_pred cccc---ccceeeecCCcCCCC
Q 005001 241 RELI---SIRTFIYDGNSFDNG 259 (720)
Q Consensus 241 ~~l~---~l~~l~l~~n~~~~~ 259 (720)
..+. +++.+.+.+|+|.|.
T Consensus 189 ~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 189 KGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp TTTTTTCCCSEEECCSCCBCCS
T ss_pred hhhcccccCCeEEeCCCCccCc
Confidence 7553 578899999999875
No 267
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.85 E-value=3.5e-21 Score=212.63 Aligned_cols=186 Identities=18% Similarity=0.176 Sum_probs=148.5
Q ss_pred CCceeEecC-----------CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--Cccceecccccc
Q 005001 74 SWKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNN 140 (720)
Q Consensus 74 ~w~gv~c~~-----------~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~ 140 (720)
.|..|.|.. .+++.|+|++|+|++..+..|.++++|++|+|++|+|++..|..+. ++|++|+|++|+
T Consensus 55 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 55 QFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp SSCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 468899974 3588999999999999999999999999999999999987776665 899999999999
Q ss_pred CcCCCCccccccCCccEEEccccccccccccccCCCCCCCeeecCCCcccCCCC-ccccCCCCCCeeEeccccccccccc
Q 005001 141 FSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLP-NSFISLSNISSLYLQNNQVTGSLNV 219 (720)
Q Consensus 141 l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~~~~~~ 219 (720)
|++..+..+.++++|++|+|++|+|++..+..|.++++|+.|+|++|+..+.++ ..|..+++|++|+|++|+|++....
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~ 214 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNL 214 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCCCC
T ss_pred CCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccccccc
Confidence 997777789999999999999999998777788888888888888844333444 4577888888888888888765443
Q ss_pred cCCCCcCeEEccCccCcccCcccc---cccceeeecCCcCCCC
Q 005001 220 FSGLPLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDNG 259 (720)
Q Consensus 220 ~~~~~L~~l~l~~N~l~g~ip~~l---~~l~~l~l~~n~~~~~ 259 (720)
....+|+.|+|++|+|++..|..| .+|+.|++.+|.+...
T Consensus 215 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 257 (452)
T 3zyi_A 215 TPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLI 257 (452)
T ss_dssp TTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEE
T ss_pred cccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceE
Confidence 334457777888777777666654 3556677777766543
No 268
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.85 E-value=8e-21 Score=192.36 Aligned_cols=167 Identities=23% Similarity=0.279 Sum_probs=148.9
Q ss_pred CCceeEecC-----------CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--Cccceecccccc
Q 005001 74 SWKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNN 140 (720)
Q Consensus 74 ~w~gv~c~~-----------~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~ 140 (720)
+|..|.|+. ..++.|+|++|++++..+..|.++++|++|+|++|.|++..|..+. ++|++|+|++|+
T Consensus 15 ~~~~l~~~~~~l~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 94 (251)
T 3m19_A 15 GKKEVDCQGKSLDSVPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQ 94 (251)
T ss_dssp GGTEEECTTCCCSSCCSCCCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred CCeEEecCCCCccccCCCCCCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCc
Confidence 678888864 3588999999999999999999999999999999999987776554 899999999999
Q ss_pred CcCCCCccccccCCccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccc-
Q 005001 141 FSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV- 219 (720)
Q Consensus 141 l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~- 219 (720)
|++..+..+.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+.
T Consensus 95 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 174 (251)
T 3m19_A 95 LASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGA 174 (251)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred ccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHH
Confidence 9988888899999999999999999988888899999999999999999977777899999999999999999987763
Q ss_pred cCC-CCcCeEEccCccCcccCc
Q 005001 220 FSG-LPLTTLNVANNHFSGWIP 240 (720)
Q Consensus 220 ~~~-~~L~~l~l~~N~l~g~ip 240 (720)
+.. .+|+.|+|++|.|++..+
T Consensus 175 ~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 175 FDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp TTTCTTCCEEECCSCCBCTTST
T ss_pred HhCCCCCCEEEeeCCceeCCcc
Confidence 333 459999999999987633
No 269
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.85 E-value=1.9e-21 Score=203.16 Aligned_cols=191 Identities=20% Similarity=0.273 Sum_probs=147.4
Q ss_pred CCCCCCCceeEecC-----------CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCC--CCCCC--CCccce
Q 005001 69 DPCGESWKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDT--IPYQL--PPNLTS 133 (720)
Q Consensus 69 ~~c~~~w~gv~c~~-----------~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~--~p~~~--~~~L~~ 133 (720)
+.|.|.|++|.|+. .+++.|+|++|+++...+..|.++++|++|+|++|.++.. +|..+ .++|++
T Consensus 3 ~~C~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~ 82 (306)
T 2z66_A 3 SRCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKY 82 (306)
T ss_dssp TTCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCE
T ss_pred CCCeeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCE
Confidence 45767999999975 3588999999999976666789999999999999999832 23222 278888
Q ss_pred eccccccCcCCCCccccccCCccEEEccccccccccc-cccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEecccc
Q 005001 134 LNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIG-DIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQ 212 (720)
Q Consensus 134 L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~ 212 (720)
|+|++|.++ .+|..+.++++|++|+|++|++++..+ ..+..+++|++|+|++|++++..|..+..+++|++|+|++|+
T Consensus 83 L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 161 (306)
T 2z66_A 83 LDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNS 161 (306)
T ss_dssp EECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCE
T ss_pred EECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCc
Confidence 888888888 567778888888888888888887655 577888888888888888887777778888888888888888
Q ss_pred ccc-ccc-ccCC-CCcCeEEccCccCcccCcccc---cccceeeecCCcCCCCC
Q 005001 213 VTG-SLN-VFSG-LPLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDNGP 260 (720)
Q Consensus 213 l~~-~~~-~~~~-~~L~~l~l~~N~l~g~ip~~l---~~l~~l~l~~n~~~~~~ 260 (720)
+++ .++ .+.. .+|+.|+|++|++++..|..+ .+|+.|++.+|.+...+
T Consensus 162 l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 215 (306)
T 2z66_A 162 FQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLD 215 (306)
T ss_dssp EGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCC
T ss_pred cccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccC
Confidence 876 333 2333 358888888888887767655 46677888888776543
No 270
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.84 E-value=8.8e-21 Score=225.54 Aligned_cols=89 Identities=22% Similarity=0.248 Sum_probs=76.9
Q ss_pred ccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCCCCcCeEEccCccCcccCcccccccceeee
Q 005001 172 IFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPRELISIRTFIY 251 (720)
Q Consensus 172 ~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~g~ip~~l~~l~~l~l 251 (720)
.|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++.++.....+|+.|+|++|+|+|.+|..+.+++.+++
T Consensus 475 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l 554 (844)
T 3j0a_A 475 VFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDI 554 (844)
T ss_dssp CSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEEE
T ss_pred hhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCEEEe
Confidence 35667788888888888887778888899999999999999998776665577999999999999999999999999999
Q ss_pred cCCcCCCCC
Q 005001 252 DGNSFDNGP 260 (720)
Q Consensus 252 ~~n~~~~~~ 260 (720)
.+|++.|..
T Consensus 555 ~~Np~~C~c 563 (844)
T 3j0a_A 555 THNKFICEC 563 (844)
T ss_dssp EEECCCCSS
T ss_pred cCCCccccc
Confidence 999999854
No 271
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.84 E-value=8e-21 Score=200.20 Aligned_cols=173 Identities=19% Similarity=0.273 Sum_probs=150.9
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccc---------
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIAS--------- 151 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~--------- 151 (720)
.+++.|+|++|+++ .+|..++++++|++|+|++|.|+ .+|..+. ++|++|+|++|++.+.+|..+..
T Consensus 104 ~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~ 181 (328)
T 4fcg_A 104 SHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQG 181 (328)
T ss_dssp TTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEE
T ss_pred CCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhcc
Confidence 47889999999999 88999999999999999999999 7887765 79999999999999999988765
Q ss_pred cCCccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEecccccccccccc-CC-CCcCeEE
Q 005001 152 MVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVF-SG-LPLTTLN 229 (720)
Q Consensus 152 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~-~~L~~l~ 229 (720)
+++|++|+|++|+|+ .+|..++.+++|++|+|++|++++ +|..++.+++|++|+|++|++.+.+|.. .. .+|+.|+
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~ 259 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLI 259 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEE
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEE
Confidence 999999999999999 788889999999999999999994 7778999999999999999999887653 33 4599999
Q ss_pred ccCccCcccCcccc---cccceeeecCCcCCCC
Q 005001 230 VANNHFSGWIPREL---ISIRTFIYDGNSFDNG 259 (720)
Q Consensus 230 l~~N~l~g~ip~~l---~~l~~l~l~~n~~~~~ 259 (720)
|++|++.+.+|..+ .+|+.|++.+|++...
T Consensus 260 L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~ 292 (328)
T 4fcg_A 260 LKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSR 292 (328)
T ss_dssp CTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCC
T ss_pred CCCCCchhhcchhhhcCCCCCEEeCCCCCchhh
Confidence 99999999999765 4677889999887654
No 272
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.84 E-value=1.5e-20 Score=194.18 Aligned_cols=178 Identities=22% Similarity=0.243 Sum_probs=157.7
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCC-CCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEE
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNS-IHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLN 159 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~-l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 159 (720)
.+++.|+|++|.+++..+..|.++++|++|+|++|. +++..|..+. ++|++|+|++|++++..|..+.++++|++|+
T Consensus 56 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 135 (285)
T 1ozn_A 56 RNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLY 135 (285)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEE
Confidence 479999999999999989999999999999999998 7765566665 8999999999999988899999999999999
Q ss_pred ccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccc-cCC-CCcCeEEccCccCcc
Q 005001 160 VSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVANNHFSG 237 (720)
Q Consensus 160 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~l~l~~N~l~g 237 (720)
|++|++++..+..|+.+++|++|+|++|++++..+..+..+++|++|+|++|+|++..+. +.. .+|+.|+|++|+|++
T Consensus 136 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 215 (285)
T 1ozn_A 136 LQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSA 215 (285)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCc
Confidence 999999988888899999999999999999976666799999999999999999997653 333 469999999999998
Q ss_pred cCcccc---cccceeeecCCcCCCCC
Q 005001 238 WIPREL---ISIRTFIYDGNSFDNGP 260 (720)
Q Consensus 238 ~ip~~l---~~l~~l~l~~n~~~~~~ 260 (720)
..|..+ .+|+.|++.+|++.|..
T Consensus 216 ~~~~~~~~l~~L~~L~l~~N~~~c~~ 241 (285)
T 1ozn_A 216 LPTEALAPLRALQYLRLNDNPWVCDC 241 (285)
T ss_dssp CCHHHHTTCTTCCEEECCSSCEECSG
T ss_pred CCHHHcccCcccCEEeccCCCccCCC
Confidence 666544 57888999999998753
No 273
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.83 E-value=4.9e-20 Score=188.90 Aligned_cols=175 Identities=21% Similarity=0.236 Sum_probs=136.4
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEccc
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 162 (720)
.+++.|++++|++... +.+..+++|++|+|++|.+++.-...-.++|++|+|++|++++..+..+.++++|++|+|++
T Consensus 41 ~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 118 (272)
T 3rfs_A 41 NSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVE 118 (272)
T ss_dssp TTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCCGGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred cceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCchhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCC
Confidence 4678888888887642 35788888888888888888632222237888888888888877777788888888888888
Q ss_pred cccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEecccccccccccc-C-CCCcCeEEccCccCcccCc
Q 005001 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVF-S-GLPLTTLNVANNHFSGWIP 240 (720)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~-~~~L~~l~l~~N~l~g~ip 240 (720)
|++++..+..|+.+++|++|+|++|++++..+..++.+++|++|+|++|+|++..+.. . ..+|+.|+|++|+|++..|
T Consensus 119 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 198 (272)
T 3rfs_A 119 NQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPD 198 (272)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCH
Confidence 8888877777888888888888888888766666788888888888888888766543 2 3458888888888887766
Q ss_pred ccc---cccceeeecCCcCCCC
Q 005001 241 REL---ISIRTFIYDGNSFDNG 259 (720)
Q Consensus 241 ~~l---~~l~~l~l~~n~~~~~ 259 (720)
..+ .+|+.|++.+|++.|.
T Consensus 199 ~~~~~l~~L~~L~l~~N~~~~~ 220 (272)
T 3rfs_A 199 GVFDRLTSLQYIWLHDNPWDCT 220 (272)
T ss_dssp TTTTTCTTCCEEECCSSCBCCC
T ss_pred HHHhCCcCCCEEEccCCCcccc
Confidence 543 5677888888888754
No 274
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.83 E-value=2.5e-20 Score=204.99 Aligned_cols=186 Identities=18% Similarity=0.185 Sum_probs=145.1
Q ss_pred CCceeEecC-----------CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--Cccceecccccc
Q 005001 74 SWKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNN 140 (720)
Q Consensus 74 ~w~gv~c~~-----------~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~ 140 (720)
.|..|.|.. ..++.|+|++|++++..+..|.++++|++|+|++|.|++..+..+. ++|++|+|++|+
T Consensus 44 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 44 QFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp TSCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 477899974 3578899999999999899999999999999999999976665554 899999999999
Q ss_pred CcCCCCccccccCCccEEEccccccccccccccCCCCCCCeeecCCCcccCCCC-ccccCCCCCCeeEeccccccccccc
Q 005001 141 FSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLP-NSFISLSNISSLYLQNNQVTGSLNV 219 (720)
Q Consensus 141 l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~~~~~~ 219 (720)
|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+..+.++ ..|.++++|++|+|++|+|+.....
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~ 203 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNL 203 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCCCC
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcccccc
Confidence 997666789999999999999999998777788888888888888844433444 4677788888888888888755433
Q ss_pred cCCCCcCeEEccCccCcccCcccc---cccceeeecCCcCCCC
Q 005001 220 FSGLPLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDNG 259 (720)
Q Consensus 220 ~~~~~L~~l~l~~N~l~g~ip~~l---~~l~~l~l~~n~~~~~ 259 (720)
....+|+.|+|++|+|++..|..| .+|+.|++.+|.+...
T Consensus 204 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 246 (440)
T 3zyj_A 204 TPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVI 246 (440)
T ss_dssp TTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEE
T ss_pred CCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEE
Confidence 333457777777777776666554 3556667777766543
No 275
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.82 E-value=2e-20 Score=206.78 Aligned_cols=150 Identities=21% Similarity=0.210 Sum_probs=131.8
Q ss_pred CCCCCCCceeEecC----------CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCC-CC--Cccceec
Q 005001 69 DPCGESWKGVACEG----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQ-LP--PNLTSLN 135 (720)
Q Consensus 69 ~~c~~~w~gv~c~~----------~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~-~~--~~L~~L~ 135 (720)
+.|.|.+..|.|+. .+++.|+|++|++++..|..|+++++|++|+|++|.+.+.++.. +. ++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 34533444599975 35899999999999999999999999999999999998777643 43 8999999
Q ss_pred cccccCcCCCCccccccCCccEEEccccccccccccc--cCCCCCCCeeecCCCcccCCCCcc-ccCCCCCCeeEecccc
Q 005001 136 LASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDI--FGNLAGLATLDLSFNNFSGDLPNS-FISLSNISSLYLQNNQ 212 (720)
Q Consensus 136 L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~g~~p~~-~~~l~~L~~L~l~~N~ 212 (720)
|++|++++..|..++++++|++|+|++|++++.+|.. |+.+++|++|+|++|++++..|.. +..+++|++|+|++|+
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCc
Confidence 9999999989999999999999999999999877665 999999999999999999887877 8899999999999999
Q ss_pred cccccc
Q 005001 213 VTGSLN 218 (720)
Q Consensus 213 l~~~~~ 218 (720)
+++..+
T Consensus 166 l~~~~~ 171 (455)
T 3v47_A 166 VKSICE 171 (455)
T ss_dssp BSCCCT
T ss_pred ccccCh
Confidence 998654
No 276
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.82 E-value=1e-19 Score=192.09 Aligned_cols=196 Identities=18% Similarity=0.220 Sum_probs=153.6
Q ss_pred CCCCCCCCCCCCCCCCceeEecC-----------CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC
Q 005001 60 LTNWKGNEGDPCGESWKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP 128 (720)
Q Consensus 60 l~~w~~~~~~~c~~~w~gv~c~~-----------~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 128 (720)
+..|.......|.|.|+.+.|+. ..++.|+|++|++++..+..|+++++|++|+|++|.+++..|..+.
T Consensus 18 i~~~~~~cp~~c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 97 (330)
T 1xku_A 18 IEPMGPVCPFRCQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFA 97 (330)
T ss_dssp ----CCCCCTTCEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTT
T ss_pred cccccCCCCCCCcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhc
Confidence 34454333345667899999974 3578899999999998888999999999999999999988787776
Q ss_pred --CccceeccccccCcCCCCccccccCCccEEEccccccccccccccCCCCCCCeeecCCCccc--CCCCccccCCCCCC
Q 005001 129 --PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFS--GDLPNSFISLSNIS 204 (720)
Q Consensus 129 --~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~--g~~p~~~~~l~~L~ 204 (720)
++|++|+|++|+++ .+|..+. ++|++|+|++|++++..+..|.++++|+.|+|++|++. +..+..+..+++|+
T Consensus 98 ~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~ 174 (330)
T 1xku_A 98 PLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLS 174 (330)
T ss_dssp TCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCC
T ss_pred CCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcC
Confidence 79999999999998 6776654 78999999999998888888888999999999999885 36677888888888
Q ss_pred eeEeccccccccccccCCCCcCeEEccCccCcccCcccc---cccceeeecCCcCCCC
Q 005001 205 SLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDNG 259 (720)
Q Consensus 205 ~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~g~ip~~l---~~l~~l~l~~n~~~~~ 259 (720)
+|++++|+++..... ...+|+.|+|++|++++..|..+ .+|+.|++.+|.+...
T Consensus 175 ~L~l~~n~l~~l~~~-~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 231 (330)
T 1xku_A 175 YIRIADTNITTIPQG-LPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAV 231 (330)
T ss_dssp EEECCSSCCCSCCSS-CCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEE
T ss_pred EEECCCCccccCCcc-ccccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCcee
Confidence 888888888764332 22568888888888887766655 4567777888776643
No 277
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.82 E-value=4.5e-20 Score=192.64 Aligned_cols=176 Identities=23% Similarity=0.252 Sum_probs=123.2
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCC-CCCC--CccceeccccccCcCCCCccccccCCccEEE
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIP-YQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLN 159 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 159 (720)
.+++.|+|++|++++ ++..+..+++|++|+|++|++++..+ ..+. ++|++|+|++|.+++..|..+.++++|++|+
T Consensus 78 ~~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 156 (306)
T 2z66_A 78 TSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 156 (306)
T ss_dssp SCCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEE
T ss_pred cccCEEECCCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEE
Confidence 456667777777663 55567777777777777777775443 2222 6777777777777777777777777777777
Q ss_pred cccccccc-ccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccc-cC-CCCcCeEEccCccCc
Q 005001 160 VSRNSLTQ-SIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FS-GLPLTTLNVANNHFS 236 (720)
Q Consensus 160 L~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~-~~~L~~l~l~~N~l~ 236 (720)
|++|.+++ .+|..+..+++|++|+|++|++++..|..+..+++|++|+|++|+|++..+. +. ..+|+.|+|++|+++
T Consensus 157 l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 236 (306)
T 2z66_A 157 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM 236 (306)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCC
T ss_pred CCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCc
Confidence 77777776 5677777777777777777777766677777777777777777777765442 22 245777777777777
Q ss_pred ccCccccc----ccceeeecCCcCCCC
Q 005001 237 GWIPRELI----SIRTFIYDGNSFDNG 259 (720)
Q Consensus 237 g~ip~~l~----~l~~l~l~~n~~~~~ 259 (720)
+.+|..+. +++.|++.+|++.|.
T Consensus 237 ~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 237 TSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp BCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred ccCHHHHHhhhccCCEEEccCCCeecc
Confidence 77766542 556777777777655
No 278
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.81 E-value=2.1e-20 Score=195.72 Aligned_cols=175 Identities=18% Similarity=0.172 Sum_probs=120.7
Q ss_pred CCEEEEEcCCCCCcccccccc--cCCCCCCEEEccCCCCCCCCCCCCC-------CccceeccccccCcCCCCccccccC
Q 005001 83 SAVVSIDISGLGLSGTMGYLL--SDLLSLRKFDLSGNSIHDTIPYQLP-------PNLTSLNLASNNFSGNLPYSIASMV 153 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l--~~l~~L~~L~L~~N~l~~~~p~~~~-------~~L~~L~L~~N~l~g~~p~~~~~l~ 153 (720)
.+++.|+|++|++++.+|..+ +.+++|++|+|++|++++. |..+. ++|++|+|++|++++..|..+++++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 357777777777777777765 7777777777777777765 54332 6777777777777776667777777
Q ss_pred CccEEEccccccccc--ccccc--CCCCCCCeeecCCCcccC--CCC-ccccCCCCCCeeEecccccccccc--ccC-CC
Q 005001 154 SLSYLNVSRNSLTQS--IGDIF--GNLAGLATLDLSFNNFSG--DLP-NSFISLSNISSLYLQNNQVTGSLN--VFS-GL 223 (720)
Q Consensus 154 ~L~~L~L~~N~l~~~--~p~~~--~~l~~L~~L~l~~N~l~g--~~p-~~~~~l~~L~~L~l~~N~l~~~~~--~~~-~~ 223 (720)
+|++|+|++|++.+. +|..+ +.+++|++|+|++|+|++ .++ ..+..+++|++|+|++|+|++.++ .+. ..
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~ 253 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPS 253 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCT
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcC
Confidence 777777777777765 23344 677777777777777773 222 223466777777777777777553 222 24
Q ss_pred CcCeEEccCccCcccCccccc-ccceeeecCCcCCCC
Q 005001 224 PLTTLNVANNHFSGWIPRELI-SIRTFIYDGNSFDNG 259 (720)
Q Consensus 224 ~L~~l~l~~N~l~g~ip~~l~-~l~~l~l~~n~~~~~ 259 (720)
+|+.|+|++|+|+ .+|..+. +|+.|++++|.+...
T Consensus 254 ~L~~L~Ls~N~l~-~ip~~~~~~L~~L~Ls~N~l~~~ 289 (312)
T 1wwl_A 254 QLNSLNLSFTGLK-QVPKGLPAKLSVLDLSYNRLDRN 289 (312)
T ss_dssp TCCEEECTTSCCS-SCCSSCCSEEEEEECCSSCCCSC
T ss_pred CCCEEECCCCccC-hhhhhccCCceEEECCCCCCCCC
Confidence 5777778777777 6676554 677777777777654
No 279
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.81 E-value=4.5e-20 Score=185.34 Aligned_cols=190 Identities=17% Similarity=0.230 Sum_probs=156.8
Q ss_pred CCCCCCC-ce--eEecC--------CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCC-CCCCCCCCCC--Ccccee
Q 005001 69 DPCGESW-KG--VACEG--------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNS-IHDTIPYQLP--PNLTSL 134 (720)
Q Consensus 69 ~~c~~~w-~g--v~c~~--------~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~-l~~~~p~~~~--~~L~~L 134 (720)
..|.|.+ .+ |.|.. ..++.|+|++|++++..+..|.++++|++|+|++|+ +++..+..+. ++|++|
T Consensus 6 ~~C~C~~~~~~~v~c~~l~~ip~~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L 85 (239)
T 2xwt_C 6 PPCECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHI 85 (239)
T ss_dssp SSCSEEECSTTEEEECSCSSCCCCCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEE
T ss_pred CCCeeCCCCcceeEccCccccCCCCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEE
Confidence 3444433 44 55953 479999999999999888899999999999999997 8754444543 899999
Q ss_pred cccc-ccCcCCCCccccccCCccEEEccccccccccccccCCCCCCC---eeecCCC-cccCCCCccccCCCCCC-eeEe
Q 005001 135 NLAS-NNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLA---TLDLSFN-NFSGDLPNSFISLSNIS-SLYL 208 (720)
Q Consensus 135 ~L~~-N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~---~L~l~~N-~l~g~~p~~~~~l~~L~-~L~l 208 (720)
+|++ |++++..+..|.++++|++|+|++|++++ +|. |+.+++|+ +|+|++| ++++..+..|..+++|+ +|+|
T Consensus 86 ~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l 163 (239)
T 2xwt_C 86 EIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKL 163 (239)
T ss_dssp EEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEEC
T ss_pred ECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEc
Confidence 9999 99997777899999999999999999997 666 88999998 9999999 99976667799999999 9999
Q ss_pred cccccccccc-ccCCCCcCeEEccCcc-CcccCcccc----cccceeeecCCcCCCCC
Q 005001 209 QNNQVTGSLN-VFSGLPLTTLNVANNH-FSGWIPREL----ISIRTFIYDGNSFDNGP 260 (720)
Q Consensus 209 ~~N~l~~~~~-~~~~~~L~~l~l~~N~-l~g~ip~~l----~~l~~l~l~~n~~~~~~ 260 (720)
++|+|+...+ .+...+|+.|+|++|+ +++..+..| .+|+.|++.+|++...|
T Consensus 164 ~~n~l~~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~ 221 (239)
T 2xwt_C 164 YNNGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALP 221 (239)
T ss_dssp CSCCCCEECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCC
T ss_pred CCCCCcccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCC
Confidence 9999995443 2344569999999995 986555544 57788999999997654
No 280
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.81 E-value=8e-20 Score=187.32 Aligned_cols=172 Identities=23% Similarity=0.262 Sum_probs=149.0
Q ss_pred CCCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEE
Q 005001 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLN 159 (720)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 159 (720)
..+++.|+|++|++++. +.++++++|++|+|++|.+++..+..+. ++|++|+|++|++++..+..+.++++|++|+
T Consensus 62 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp CTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 35799999999999874 4899999999999999999976665443 8999999999999988888899999999999
Q ss_pred ccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEecccccccccccc-C-CCCcCeEEccCccCcc
Q 005001 160 VSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVF-S-GLPLTTLNVANNHFSG 237 (720)
Q Consensus 160 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~-~~~L~~l~l~~N~l~g 237 (720)
|++|+|++..+..|+.+++|+.|+|++|++++..+..++.+++|++|+|++|+|++.++.. . ..+|+.|+|++|.+.+
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 219 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc
Confidence 9999999888888999999999999999999877777899999999999999999977643 3 3569999999999998
Q ss_pred cCcccccccceeeecCCcCCCC
Q 005001 238 WIPRELISIRTFIYDGNSFDNG 259 (720)
Q Consensus 238 ~ip~~l~~l~~l~l~~n~~~~~ 259 (720)
..| +++.+.+..|.+...
T Consensus 220 ~~~----~l~~l~~~~n~~~g~ 237 (272)
T 3rfs_A 220 TCP----GIRYLSEWINKHSGV 237 (272)
T ss_dssp CTT----TTHHHHHHHHHTGGG
T ss_pred cCc----HHHHHHHHHHhCCCc
Confidence 765 466677777777643
No 281
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=2.6e-20 Score=184.42 Aligned_cols=151 Identities=23% Similarity=0.250 Sum_probs=111.6
Q ss_pred EEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCC---CCccceeccccccCcCCCCccccccCCccEEEcccc
Q 005001 87 SIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQL---PPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRN 163 (720)
Q Consensus 87 ~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~---~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N 163 (720)
.|++++|+++. +|..+. ..+++|+|++|+|++..|... .++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 34555566654 455443 345788888888886655432 277888888888888777778888888888888888
Q ss_pred ccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccc-cCC-CCcCeEEccCccCcccCc
Q 005001 164 SLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVANNHFSGWIP 240 (720)
Q Consensus 164 ~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~l~l~~N~l~g~ip 240 (720)
+|++..+..|..+++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+. +.. .+|+.|+|++|.|++..+
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 88887777788888888888888888877788888888888888888888886543 333 348888888888876544
No 282
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.81 E-value=1.1e-19 Score=201.99 Aligned_cols=188 Identities=16% Similarity=0.202 Sum_probs=163.7
Q ss_pred CCCCCceeEecC-----------CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--Cccceeccc
Q 005001 71 CGESWKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLA 137 (720)
Q Consensus 71 c~~~w~gv~c~~-----------~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~ 137 (720)
|...|..|.|+. ..++.|+|++|++++..+..|.++++|++|+|++|.+++..|..+. ++|++|+|+
T Consensus 9 C~~~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 88 (477)
T 2id5_A 9 CSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLR 88 (477)
T ss_dssp EETTTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred ECCCCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECC
Confidence 433578999974 2578899999999999999999999999999999999988787775 899999999
Q ss_pred cccCcCCCCccccccCCccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccc
Q 005001 138 SNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSL 217 (720)
Q Consensus 138 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~ 217 (720)
+|++++..+..|.++++|++|+|++|++++..|..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..
T Consensus 89 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 168 (477)
T 2id5_A 89 SNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIP 168 (477)
T ss_dssp SSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCC
T ss_pred CCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccC
Confidence 99999766677899999999999999999999999999999999999999999888999999999999999999999866
Q ss_pred cc-c-CCCCcCeEEccCccCcccCcccc---cccceeeecCCcCCC
Q 005001 218 NV-F-SGLPLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDN 258 (720)
Q Consensus 218 ~~-~-~~~~L~~l~l~~N~l~g~ip~~l---~~l~~l~l~~n~~~~ 258 (720)
+. + ...+|+.|+|++|.+++..+..+ .+|+.|++.+|++..
T Consensus 169 ~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~ 214 (477)
T 2id5_A 169 TEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLD 214 (477)
T ss_dssp HHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCC
T ss_pred hhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCcccc
Confidence 43 3 33569999999999998766555 467788888877543
No 283
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.81 E-value=4.1e-20 Score=178.90 Aligned_cols=171 Identities=20% Similarity=0.247 Sum_probs=134.4
Q ss_pred EEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCC-C--CCccceeccccccCcCCCCccccccCCccEEEcccc
Q 005001 87 SIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQ-L--PPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRN 163 (720)
Q Consensus 87 ~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~-~--~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N 163 (720)
.|++++++|+ .+|..+.. +|++|+|++|+|++..+.. + .++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 12 ~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 12 TVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp EEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 3455566663 56665544 8999999999999766643 3 389999999999999988999999999999999999
Q ss_pred ccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCCCC-cCeEEccCccCcccCccc
Q 005001 164 SLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLP-LTTLNVANNHFSGWIPRE 242 (720)
Q Consensus 164 ~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~l~l~~N~l~g~ip~~ 242 (720)
+|++..+..|..+++|++|+|++|+|++.+|..|..+++|++|+|++|.+++..+...... ++...+..+......|..
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~~ 168 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSK 168 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSSTT
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCChH
Confidence 9999999899999999999999999999889999999999999999999998654321111 333344555666667777
Q ss_pred ccccceeeecCCcCCCCC
Q 005001 243 LISIRTFIYDGNSFDNGP 260 (720)
Q Consensus 243 l~~l~~l~l~~n~~~~~~ 260 (720)
+.......+..+.+.|..
T Consensus 169 l~~~~l~~l~~~~~~C~~ 186 (192)
T 1w8a_A 169 VRDVQIKDLPHSEFKCSS 186 (192)
T ss_dssp TTTSBGGGSCTTTCCCCC
T ss_pred HcCCChhhCcHhhcCcCC
Confidence 777777777777777653
No 284
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.80 E-value=1.9e-19 Score=190.28 Aligned_cols=186 Identities=18% Similarity=0.231 Sum_probs=150.4
Q ss_pred CCCCCCCceeEecC-----------CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--Cccceec
Q 005001 69 DPCGESWKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLN 135 (720)
Q Consensus 69 ~~c~~~w~gv~c~~-----------~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~ 135 (720)
..|.|.|+.+.|+. .+++.|+|++|++++..+..|.++++|++|+|++|++++..|..+. ++|++|+
T Consensus 29 ~~c~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 108 (332)
T 2ft3_A 29 FGCHCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLY 108 (332)
T ss_dssp SSCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEE
T ss_pred CCCcccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEE
Confidence 44556899999974 2588999999999988888999999999999999999987776665 7899999
Q ss_pred cccccCcCCCCccccccCCccEEEccccccccccccccCCCCCCCeeecCCCccc--CCCCccccCCCCCCeeEeccccc
Q 005001 136 LASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFS--GDLPNSFISLSNISSLYLQNNQV 213 (720)
Q Consensus 136 L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~--g~~p~~~~~l~~L~~L~l~~N~l 213 (720)
|++|+++ .+|..+. ++|++|+|++|++++..+..|..+++|+.|+|++|+++ +..|..+..+ +|++|++++|++
T Consensus 109 L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l 184 (332)
T 2ft3_A 109 ISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKL 184 (332)
T ss_dssp CCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBC
T ss_pred CCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCC
Confidence 9999998 6776665 88999999999999877778899999999999999996 4677778877 888888888888
Q ss_pred cccccccCCCCcCeEEccCccCcccCcccc---cccceeeecCCcCCCC
Q 005001 214 TGSLNVFSGLPLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDNG 259 (720)
Q Consensus 214 ~~~~~~~~~~~L~~l~l~~N~l~g~ip~~l---~~l~~l~l~~n~~~~~ 259 (720)
++... ....+|+.|+|++|.+++..|..+ .+|+.|++.+|.+...
T Consensus 185 ~~l~~-~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~ 232 (332)
T 2ft3_A 185 TGIPK-DLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMI 232 (332)
T ss_dssp SSCCS-SSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCC
T ss_pred CccCc-cccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcC
Confidence 87433 223568888888888887666554 4566777888877654
No 285
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.80 E-value=9.9e-20 Score=208.11 Aligned_cols=132 Identities=20% Similarity=0.251 Sum_probs=97.2
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEEcc
Q 005001 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (720)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~ 161 (720)
++..|++++|.+.+..+..+.++++|++|+|++|.|++..|..+. ++|++|+|++|.|++..|..|+++++|++|+|+
T Consensus 52 ~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 131 (597)
T 3oja_B 52 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 131 (597)
T ss_dssp CCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEee
Confidence 356677777777766666677777777777777777766655554 677777777777777667777777777777777
Q ss_pred ccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccc
Q 005001 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTG 215 (720)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~ 215 (720)
+|.|++..+..|+++++|++|+|++|+|++..|..|+.+++|++|+|++|+|++
T Consensus 132 ~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 132 RNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 185 (597)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSB
T ss_pred CCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCC
Confidence 777776656666777777777777777777777777777777777777777765
No 286
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=1.7e-19 Score=178.62 Aligned_cols=156 Identities=26% Similarity=0.324 Sum_probs=115.3
Q ss_pred CCCCCCCceeEecCCCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCC
Q 005001 69 DPCGESWKGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLP 146 (720)
Q Consensus 69 ~~c~~~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p 146 (720)
..|.|.|..|.|++ ++++ .+|..+. ++|+.|+|++|+|++..+..+. ++|++|+|++|+|++..|
T Consensus 7 ~~C~C~~~~v~c~~----------~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~ 73 (220)
T 2v9t_B 7 AACTCSNNIVDCRG----------KGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAP 73 (220)
T ss_dssp TTSEEETTEEECTT----------SCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECT
T ss_pred CCCEECCCEEEcCC----------CCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCH
Confidence 45666787777764 3343 3444443 5788888888888855554444 678888888888887778
Q ss_pred ccccccCCccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccc-cCC-CC
Q 005001 147 YSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LP 224 (720)
Q Consensus 147 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~ 224 (720)
..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+. +.. .+
T Consensus 74 ~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 153 (220)
T 2v9t_B 74 DAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRA 153 (220)
T ss_dssp TTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred HHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCC
Confidence 8888888888888888888866666778888888888888888877777888888888888888888876653 332 35
Q ss_pred cCeEEccCccCcc
Q 005001 225 LTTLNVANNHFSG 237 (720)
Q Consensus 225 L~~l~l~~N~l~g 237 (720)
|+.|+|++|.+..
T Consensus 154 L~~L~L~~N~~~c 166 (220)
T 2v9t_B 154 IQTMHLAQNPFIC 166 (220)
T ss_dssp CCEEECCSSCEEC
T ss_pred CCEEEeCCCCcCC
Confidence 8888888888863
No 287
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.80 E-value=6.4e-20 Score=205.81 Aligned_cols=178 Identities=24% Similarity=0.349 Sum_probs=147.0
Q ss_pred CCCCCCCCCCCCC---CCcee-EecCCCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCCCccceecc
Q 005001 61 TNWKGNEGDPCGE---SWKGV-ACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNL 136 (720)
Q Consensus 61 ~~w~~~~~~~c~~---~w~gv-~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L 136 (720)
.+|.. ..++|.. .|.|+ .|..++++.|+|++|+|++ +|..+. ++|++|+|++|+|+ .+| .+.++|++|+|
T Consensus 34 ~~W~~-~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip-~~l~~L~~L~L 107 (571)
T 3cvr_A 34 DKWEK-QALPGENRNEAVSLLKECLINQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP-ELPASLEYLDA 107 (571)
T ss_dssp HHHHT-TCCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC-CCCTTCCEEEC
T ss_pred HHHhc-cCCccccccchhhhccccccCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc-cccCCCCEEEc
Confidence 45643 3466744 59999 8988899999999999998 776663 78999999999999 788 77799999999
Q ss_pred ccccCcCCCCccccccCCccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEecccccccc
Q 005001 137 ASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGS 216 (720)
Q Consensus 137 ~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~ 216 (720)
++|+|++ +|. +.+ +|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|++|+|++|+|++.
T Consensus 108 s~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~l 175 (571)
T 3cvr_A 108 CDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTFL 175 (571)
T ss_dssp CSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCC
T ss_pred cCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCCc
Confidence 9999997 887 666 99999999999998 666 68999999999999996 776 578999999999999984
Q ss_pred ccccCCCCcCeEEccCccCcccCccccc-cc-------ceeeecCCcCCCCC
Q 005001 217 LNVFSGLPLTTLNVANNHFSGWIPRELI-SI-------RTFIYDGNSFDNGP 260 (720)
Q Consensus 217 ~~~~~~~~L~~l~l~~N~l~g~ip~~l~-~l-------~~l~l~~n~~~~~~ 260 (720)
.. +. .+|+.|+|++|+|+ .+|. +. +| +.|++.+|.+...|
T Consensus 176 p~-l~-~~L~~L~Ls~N~L~-~lp~-~~~~L~~~~~~L~~L~Ls~N~l~~lp 223 (571)
T 3cvr_A 176 PE-LP-ESLEALDVSTNLLE-SLPA-VPVRNHHSEETEIFFRCRENRITHIP 223 (571)
T ss_dssp CC-CC-TTCCEEECCSSCCS-SCCC-CC--------CCEEEECCSSCCCCCC
T ss_pred ch-hh-CCCCEEECcCCCCC-chhh-HHHhhhcccccceEEecCCCcceecC
Confidence 44 43 77999999999999 6777 43 67 88999999887543
No 288
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.80 E-value=1.3e-19 Score=189.42 Aligned_cols=176 Identities=19% Similarity=0.219 Sum_probs=145.7
Q ss_pred CEEEEEcCCCCCcccccccc--cCCCCCCEEEccCCCCCCCCCC------CCCCccceeccccccCcCCCCccccccCCc
Q 005001 84 AVVSIDISGLGLSGTMGYLL--SDLLSLRKFDLSGNSIHDTIPY------QLPPNLTSLNLASNNFSGNLPYSIASMVSL 155 (720)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~l--~~l~~L~~L~L~~N~l~~~~p~------~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L 155 (720)
+++.|+|++|++++..|..+ +++++|++|+|++|.+++..|. ...++|++|+|++|++++..|..++++++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 48899999999999999988 9999999999999999976552 224799999999999998888999999999
Q ss_pred cEEEccccccccc--cc--cccCCCCCCCeeecCCCcccCCCCc----cccCCCCCCeeEecccccccccc-ccCC----
Q 005001 156 SYLNVSRNSLTQS--IG--DIFGNLAGLATLDLSFNNFSGDLPN----SFISLSNISSLYLQNNQVTGSLN-VFSG---- 222 (720)
Q Consensus 156 ~~L~L~~N~l~~~--~p--~~~~~l~~L~~L~l~~N~l~g~~p~----~~~~l~~L~~L~l~~N~l~~~~~-~~~~---- 222 (720)
++|+|++|++.+. ++ ..++.+++|++|+|++|+++ .+|. .++.+++|++|+|++|+|++..| .+..
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 9999999998764 22 33478999999999999997 3443 24678999999999999998743 2222
Q ss_pred CCcCeEEccCccCcccCcccc-cccceeeecCCcCCCCCC
Q 005001 223 LPLTTLNVANNHFSGWIPREL-ISIRTFIYDGNSFDNGPA 261 (720)
Q Consensus 223 ~~L~~l~l~~N~l~g~ip~~l-~~l~~l~l~~n~~~~~~~ 261 (720)
.+|+.|+|++|+|+ .+|..+ .+|+.|++++|.+...|.
T Consensus 251 ~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~l~~~~~ 289 (310)
T 4glp_A 251 SALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNRLNRAPQ 289 (310)
T ss_dssp TTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCCCCSCCC
T ss_pred CcCCEEECCCCCCC-chhhhhcCCCCEEECCCCcCCCCch
Confidence 36999999999999 677755 589999999999986543
No 289
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=2.3e-19 Score=178.76 Aligned_cols=154 Identities=23% Similarity=0.250 Sum_probs=127.1
Q ss_pred CCCceeEecCCCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCcccc
Q 005001 73 ESWKGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIA 150 (720)
Q Consensus 73 ~~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~ 150 (720)
|+|++|.|+..++ + .+|..+. ++|++|+|++|+|++..|..+. ++|++|+|++|+|++..+..|.
T Consensus 19 Cs~~~v~c~~~~l----------~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~ 85 (229)
T 3e6j_A 19 CSGTTVDCRSKRH----------A-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFD 85 (229)
T ss_dssp EETTEEECTTSCC----------S-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred EeCCEeEccCCCc----------C-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcc
Confidence 3899999986443 2 4454443 7899999999999987776664 7899999999999866566789
Q ss_pred ccCCccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccc-cCC-CCcCeE
Q 005001 151 SMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTL 228 (720)
Q Consensus 151 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~l 228 (720)
++++|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..+. +.. .+|+.|
T Consensus 86 ~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 164 (229)
T 3e6j_A 86 SLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHA 164 (229)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEE
Confidence 9999999999999999888888899999999999999999 7898999999999999999999986653 333 459999
Q ss_pred EccCccCcccCc
Q 005001 229 NVANNHFSGWIP 240 (720)
Q Consensus 229 ~l~~N~l~g~ip 240 (720)
+|++|.+.+..+
T Consensus 165 ~l~~N~~~c~c~ 176 (229)
T 3e6j_A 165 YLFGNPWDCECR 176 (229)
T ss_dssp ECTTSCBCTTBG
T ss_pred EeeCCCccCCcc
Confidence 999999986654
No 290
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=1.2e-19 Score=193.92 Aligned_cols=170 Identities=22% Similarity=0.206 Sum_probs=141.7
Q ss_pred EEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCC---CCccceeccccccCcCCCCccccccCCccEEEcccc
Q 005001 87 SIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQL---PPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRN 163 (720)
Q Consensus 87 ~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~---~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N 163 (720)
.+++++++|+. +|..+. ..|+.|+|++|+|++..+..+ .++|+.|+|++|+|++..+..|.++++|++|+|++|
T Consensus 22 ~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 45666677764 555544 358999999999997666554 279999999999999888888999999999999999
Q ss_pred ccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccC-----CCCcCeEEccCccCccc
Q 005001 164 SLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFS-----GLPLTTLNVANNHFSGW 238 (720)
Q Consensus 164 ~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~-----~~~L~~l~l~~N~l~g~ 238 (720)
+|++..+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+... ..+|+.|+|++|+|++.
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 178 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKL 178 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCcc
Confidence 9998888899999999999999999998888999999999999999999998665432 34699999999999965
Q ss_pred Cccccccc-----ceeeecCCcCCCC
Q 005001 239 IPRELISI-----RTFIYDGNSFDNG 259 (720)
Q Consensus 239 ip~~l~~l-----~~l~l~~n~~~~~ 259 (720)
.+..+..+ +.|++.+|+|.|.
T Consensus 179 ~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 179 PLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp CHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred CHHHhhhccHhhcceEEecCCCccCC
Confidence 55555544 5689999999875
No 291
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.79 E-value=1.1e-19 Score=193.77 Aligned_cols=187 Identities=18% Similarity=0.221 Sum_probs=157.7
Q ss_pred CCCCceeEecC-------------CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--Cccceecc
Q 005001 72 GESWKGVACEG-------------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNL 136 (720)
Q Consensus 72 ~~~w~gv~c~~-------------~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L 136 (720)
.|.|.|+ |+. .+++.|+|++|++++..+..+.++++|++|+|++|++++..|..+. ++|++|+|
T Consensus 29 ~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (353)
T 2z80_A 29 SCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDL 107 (353)
T ss_dssp EECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEEC
Confidence 3378887 642 3689999999999988777999999999999999999987776665 89999999
Q ss_pred ccccCcCCCCccccccCCccEEEccccccccccc-cccCCCCCCCeeecCCC-cccCCCCccccCCCCCCeeEecccccc
Q 005001 137 ASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIG-DIFGNLAGLATLDLSFN-NFSGDLPNSFISLSNISSLYLQNNQVT 214 (720)
Q Consensus 137 ~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N-~l~g~~p~~~~~l~~L~~L~l~~N~l~ 214 (720)
++|++++..+..+.++++|++|+|++|++++..+ ..+..+++|++|+|++| .+++..|..+..+++|++|++++|+++
T Consensus 108 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~ 187 (353)
T 2z80_A 108 SYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQ 187 (353)
T ss_dssp CSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcC
Confidence 9999996555559999999999999999996554 58999999999999999 477666788999999999999999999
Q ss_pred ccccc-cCC-CCcCeEEccCccCcccCccc----ccccceeeecCCcCCCCC
Q 005001 215 GSLNV-FSG-LPLTTLNVANNHFSGWIPRE----LISIRTFIYDGNSFDNGP 260 (720)
Q Consensus 215 ~~~~~-~~~-~~L~~l~l~~N~l~g~ip~~----l~~l~~l~l~~n~~~~~~ 260 (720)
+..+. +.. .+|+.|++++|+++ .+|.. +.+++.|++.+|.+...+
T Consensus 188 ~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~ 238 (353)
T 2z80_A 188 SYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFH 238 (353)
T ss_dssp EECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTTCC
T ss_pred ccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCcccccc
Confidence 97554 333 35999999999996 55543 468999999999987654
No 292
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.79 E-value=3.9e-19 Score=196.31 Aligned_cols=108 Identities=19% Similarity=0.279 Sum_probs=78.9
Q ss_pred CCccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccc-cC-CCCcCeEEc
Q 005001 153 VSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FS-GLPLTTLNV 230 (720)
Q Consensus 153 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~-~~~L~~l~l 230 (720)
++|+.|+|++|++++.+|..|+.+++|++|+|++|++++..|..|..+++|++|+|++|+|++..+. +. ..+|+.|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 3566666666666666777888888888888888888877777788888888888888888776543 23 245888888
Q ss_pred cCccCcccCcccc---cccceeeecCCcCCCCC
Q 005001 231 ANNHFSGWIPREL---ISIRTFIYDGNSFDNGP 260 (720)
Q Consensus 231 ~~N~l~g~ip~~l---~~l~~l~l~~n~~~~~~ 260 (720)
++|++++..|..+ .+|+.|++.+|.+...+
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 387 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVP 387 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCCcccccChhhccccccccEEECCCCccccCC
Confidence 8888887777654 45677788888777544
No 293
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.79 E-value=6.9e-20 Score=203.66 Aligned_cols=173 Identities=20% Similarity=0.140 Sum_probs=124.1
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCCC-------------------ccceeccccccCcCC
Q 005001 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPP-------------------NLTSLNLASNNFSGN 144 (720)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~-------------------~L~~L~L~~N~l~g~ 144 (720)
+++.|+|++|++++..|..|+.+++|++|+|++|.|++..|....+ +|++|+|++|.|++.
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~~~ 114 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLDLESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRV 114 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEECTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCCCE
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcccccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCCCC
Confidence 4555555555555555555555555555555555555444432224 455555555555543
Q ss_pred CCccccccCCccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCcccc-CCCCCCeeEeccccccccccccCCC
Q 005001 145 LPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFI-SLSNISSLYLQNNQVTGSLNVFSGL 223 (720)
Q Consensus 145 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~ 223 (720)
.+. .+++|+.|+|++|.|++..|..++.+++|++|+|++|+|++.+|..+. .+++|++|+|++|.|++..+.....
T Consensus 115 ~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~~~l~ 191 (487)
T 3oja_A 115 SCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFA 191 (487)
T ss_dssp EEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCT
T ss_pred Ccc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccccccCC
Confidence 332 467889999999999988888899999999999999999988888876 7899999999999999876665666
Q ss_pred CcCeEEccCccCcccCcc--cccccceeeecCCcCCCC
Q 005001 224 PLTTLNVANNHFSGWIPR--ELISIRTFIYDGNSFDNG 259 (720)
Q Consensus 224 ~L~~l~l~~N~l~g~ip~--~l~~l~~l~l~~n~~~~~ 259 (720)
+|+.|+|++|.|++..|. .+.+|+.|++++|.+...
T Consensus 192 ~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~l 229 (487)
T 3oja_A 192 KLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVLI 229 (487)
T ss_dssp TCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCEE
T ss_pred CCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCccc
Confidence 799999999999975554 345788899999988753
No 294
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.79 E-value=7.2e-20 Score=191.64 Aligned_cols=174 Identities=20% Similarity=0.248 Sum_probs=146.5
Q ss_pred CCCEEEEEcCCCCCcccccccccCC-----CCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCC--CCccc--c
Q 005001 82 GSAVVSIDISGLGLSGTMGYLLSDL-----LSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGN--LPYSI--A 150 (720)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~l~~l-----~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~--~p~~~--~ 150 (720)
..+++.|+|++|++++. |..++.+ ++|++|+|++|+|++..|..+. ++|++|+|++|++.|. +|..+ .
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 35799999999999998 8888887 9999999999999988777775 8999999999999876 34455 8
Q ss_pred ccCCccEEEcccccccc--ccc-cccCCCCCCCeeecCCCcccCCCC-ccccCCCCCCeeEeccccccccccccCCCCcC
Q 005001 151 SMVSLSYLNVSRNSLTQ--SIG-DIFGNLAGLATLDLSFNNFSGDLP-NSFISLSNISSLYLQNNQVTGSLNVFSGLPLT 226 (720)
Q Consensus 151 ~l~~L~~L~L~~N~l~~--~~p-~~~~~l~~L~~L~l~~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~ 226 (720)
++++|++|+|++|+|++ .++ ..+..+++|++|+|++|++++.+| ..+..+++|++|+|++|+|+. +|.....+|+
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~~L~ 277 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQ-VPKGLPAKLS 277 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCSS-CCSSCCSEEE
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccCh-hhhhccCCce
Confidence 99999999999999994 233 455788999999999999998776 456778999999999999994 4433336799
Q ss_pred eEEccCccCcccCcc--cccccceeeecCCcCCC
Q 005001 227 TLNVANNHFSGWIPR--ELISIRTFIYDGNSFDN 258 (720)
Q Consensus 227 ~l~l~~N~l~g~ip~--~l~~l~~l~l~~n~~~~ 258 (720)
.|+|++|+|++. |. .+.+|+.|++.+|++..
T Consensus 278 ~L~Ls~N~l~~~-p~~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 278 VLDLSYNRLDRN-PSPDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp EEECCSSCCCSC-CCTTTSCEEEEEECTTCTTTC
T ss_pred EEECCCCCCCCC-hhHhhCCCCCEEeccCCCCCC
Confidence 999999999976 64 44577889999999864
No 295
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.79 E-value=1.8e-19 Score=204.06 Aligned_cols=185 Identities=19% Similarity=0.226 Sum_probs=160.0
Q ss_pred CCceeEecC-------------CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--Cccceecccc
Q 005001 74 SWKGVACEG-------------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLAS 138 (720)
Q Consensus 74 ~w~gv~c~~-------------~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~ 138 (720)
.|.|| |+. .+++.|+|++|++++..|..|+++++|++|+|++|++++..|..+. ++|++|+|++
T Consensus 5 ~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~ 83 (549)
T 2z81_A 5 DASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSD 83 (549)
T ss_dssp CTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTT
T ss_pred CCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCC
Confidence 78888 863 2689999999999999999999999999999999999987776665 7999999999
Q ss_pred ccCcCCCCccccccCCccEEEcccccccc-ccccccCCCCCCCeeecCCCcccCCCC-ccccCCCCCCeeEecccccccc
Q 005001 139 NNFSGNLPYSIASMVSLSYLNVSRNSLTQ-SIGDIFGNLAGLATLDLSFNNFSGDLP-NSFISLSNISSLYLQNNQVTGS 216 (720)
Q Consensus 139 N~l~g~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~~~ 216 (720)
|++++..|..++++++|++|+|++|.+++ .+|..++++++|++|+|++|++.+.+| ..+..+++|++|++++|++++.
T Consensus 84 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 163 (549)
T 2z81_A 84 NHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNY 163 (549)
T ss_dssp SCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEE
T ss_pred CccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccccc
Confidence 99998888889999999999999999997 467899999999999999999655665 6799999999999999999997
Q ss_pred cccc-CC-CCcCeEEccCccCcccCccc----ccccceeeecCCcCCCCC
Q 005001 217 LNVF-SG-LPLTTLNVANNHFSGWIPRE----LISIRTFIYDGNSFDNGP 260 (720)
Q Consensus 217 ~~~~-~~-~~L~~l~l~~N~l~g~ip~~----l~~l~~l~l~~n~~~~~~ 260 (720)
++.. .. .+|+.|++++|.+. .+|.. +.+++.|++.+|.+...+
T Consensus 164 ~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~ 212 (549)
T 2z81_A 164 QSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQ 212 (549)
T ss_dssp CTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCC
T ss_pred ChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCcccccc
Confidence 6543 33 35999999999986 45543 578999999999987654
No 296
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.79 E-value=4e-19 Score=206.64 Aligned_cols=173 Identities=24% Similarity=0.313 Sum_probs=150.2
Q ss_pred CCCCCceeEecC-----------CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--Cccceeccc
Q 005001 71 CGESWKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLA 137 (720)
Q Consensus 71 c~~~w~gv~c~~-----------~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~ 137 (720)
|.|.++.|.|+. .+++.|+|++|++++..+..|+++++|++|+|++|.+++..|..+. ++|++|+|+
T Consensus 2 C~~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 81 (680)
T 1ziw_A 2 CTVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQ 81 (680)
T ss_dssp --CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECC
T ss_pred ceeECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECC
Confidence 545677788863 3689999999999998888999999999999999999988887664 899999999
Q ss_pred cccCcCCCCccccccCCccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccc
Q 005001 138 SNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSL 217 (720)
Q Consensus 138 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~ 217 (720)
+|++++..+..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..++.+++|++|+|++|++++..
T Consensus 82 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 161 (680)
T 1ziw_A 82 HNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALK 161 (680)
T ss_dssp SSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBC
T ss_pred CCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccC
Confidence 99999655567999999999999999999888899999999999999999999988999999999999999999999876
Q ss_pred cc----cCCCCcCeEEccCccCcccCcccc
Q 005001 218 NV----FSGLPLTTLNVANNHFSGWIPREL 243 (720)
Q Consensus 218 ~~----~~~~~L~~l~l~~N~l~g~ip~~l 243 (720)
+. ....+|+.|+|++|++++..|..+
T Consensus 162 ~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~ 191 (680)
T 1ziw_A 162 SEELDIFANSSLKKLELSSNQIKEFSPGCF 191 (680)
T ss_dssp HHHHGGGTTCEESEEECTTCCCCCBCTTGG
T ss_pred HHHhhccccccccEEECCCCcccccChhhh
Confidence 53 233569999999999988777644
No 297
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.79 E-value=4.7e-20 Score=212.11 Aligned_cols=175 Identities=16% Similarity=0.304 Sum_probs=156.7
Q ss_pred CCCEEEEEcCCCCCcccccccccCCCCCCEEEccCCC-CCC-CCCCCCC--------CccceeccccccCcCCCCc--cc
Q 005001 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNS-IHD-TIPYQLP--------PNLTSLNLASNNFSGNLPY--SI 149 (720)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~-l~~-~~p~~~~--------~~L~~L~L~~N~l~g~~p~--~~ 149 (720)
..+++.|+|++|++.|.+|..|+++++|++|+|++|+ ++| .+|..+. ++|++|+|++|+++ .+|. .+
T Consensus 248 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l 326 (636)
T 4eco_A 248 LKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSL 326 (636)
T ss_dssp CTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHH
T ss_pred cCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhh
Confidence 3579999999999999999999999999999999998 998 8887653 79999999999999 8998 99
Q ss_pred cccCCccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCC-CCeeEeccccccccccccCCC---Cc
Q 005001 150 ASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSN-ISSLYLQNNQVTGSLNVFSGL---PL 225 (720)
Q Consensus 150 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~-L~~L~l~~N~l~~~~~~~~~~---~L 225 (720)
+++++|++|+|++|+++|.+| .|+.+++|++|+|++|+++ .+|..++.+++ |++|+|++|+|+..+..+... +|
T Consensus 327 ~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~~lp~~~~~~~l~~L 404 (636)
T 4eco_A 327 QKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVM 404 (636)
T ss_dssp TTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCSSCCSCCCTTCSSCE
T ss_pred ccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCcccchhhhhcccCcc
Confidence 999999999999999999999 9999999999999999999 89999999999 999999999999443333332 59
Q ss_pred CeEEccCccCcccCccccc----------ccceeeecCCcCCCC
Q 005001 226 TTLNVANNHFSGWIPRELI----------SIRTFIYDGNSFDNG 259 (720)
Q Consensus 226 ~~l~l~~N~l~g~ip~~l~----------~l~~l~l~~n~~~~~ 259 (720)
+.|+|++|+++|.+|..+. +++.|++.+|.+...
T Consensus 405 ~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~l 448 (636)
T 4eco_A 405 SAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKF 448 (636)
T ss_dssp EEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSC
T ss_pred CEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcC
Confidence 9999999999999998776 788899999998743
No 298
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.78 E-value=1.7e-18 Score=182.89 Aligned_cols=174 Identities=21% Similarity=0.226 Sum_probs=124.4
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEccc
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 162 (720)
.+++.|+|++|++++..|..|+++++|++|+|++|+++ .+|..+.++|++|+|++|++++..+..+.++++|+.|+|++
T Consensus 78 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~ 156 (332)
T 2ft3_A 78 QHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGG 156 (332)
T ss_dssp TTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCCTTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCS
T ss_pred CCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCccccccCCEEECCCCccCccCHhHhCCCccCCEEECCC
Confidence 57999999999999999999999999999999999999 78888889999999999999977677899999999999999
Q ss_pred cccc--cccccccCCCCCCCeeecCCC---------------------cccCCCCccccCCCCCCeeEeccccccccccc
Q 005001 163 NSLT--QSIGDIFGNLAGLATLDLSFN---------------------NFSGDLPNSFISLSNISSLYLQNNQVTGSLNV 219 (720)
Q Consensus 163 N~l~--~~~p~~~~~l~~L~~L~l~~N---------------------~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 219 (720)
|.++ +..|..+..+ +|++|++++| ++++..|..+..+++|+.|+|++|+|++..+.
T Consensus 157 n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 235 (332)
T 2ft3_A 157 NPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENG 235 (332)
T ss_dssp CCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTT
T ss_pred CccccCCCCcccccCC-ccCEEECcCCCCCccCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChh
Confidence 9996 3667777766 5555555555 44444444555555555555555555554431
Q ss_pred -cC-CCCcCeEEccCccCcccCcccc---cccceeeecCCcCCCC
Q 005001 220 -FS-GLPLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDNG 259 (720)
Q Consensus 220 -~~-~~~L~~l~l~~N~l~g~ip~~l---~~l~~l~l~~n~~~~~ 259 (720)
+. ..+|+.|+|++|+|+ .+|..+ .+|+.|++.+|++...
T Consensus 236 ~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~ 279 (332)
T 2ft3_A 236 SLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKV 279 (332)
T ss_dssp GGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBC
T ss_pred HhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCcc
Confidence 21 223555555555555 455433 2344555555555443
No 299
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.78 E-value=4.5e-19 Score=203.28 Aligned_cols=182 Identities=22% Similarity=0.192 Sum_probs=158.8
Q ss_pred ceeEecC-----------CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCc
Q 005001 76 KGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFS 142 (720)
Q Consensus 76 ~gv~c~~-----------~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~ 142 (720)
..|.|++ .+++.|+|++|++++..+..|.++++|++|+|++|.+++..|..+. ++|++|+|++|+++
T Consensus 14 ~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~ 93 (606)
T 3vq2_A 14 ITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQ 93 (606)
T ss_dssp TEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred CceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCccc
Confidence 4588854 4689999999999999999999999999999999999987787665 89999999999999
Q ss_pred CCCCccccccCCccEEEccccccccccccccCCCCCCCeeecCCCcccC-CCCccccCCCCCCeeEeccccccccccccC
Q 005001 143 GNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSG-DLPNSFISLSNISSLYLQNNQVTGSLNVFS 221 (720)
Q Consensus 143 g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~ 221 (720)
+..|..|+++++|++|+|++|++++..+..|+++++|++|+|++|++++ .+|..++++++|++|+|++|++++..+...
T Consensus 94 ~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 173 (606)
T 3vq2_A 94 SFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDL 173 (606)
T ss_dssp CCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTT
T ss_pred ccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhh
Confidence 8889999999999999999999999888999999999999999999986 679999999999999999999998654322
Q ss_pred -CC-C----cCeEEccCccCcccCccccc--ccceeeecCCcCC
Q 005001 222 -GL-P----LTTLNVANNHFSGWIPRELI--SIRTFIYDGNSFD 257 (720)
Q Consensus 222 -~~-~----L~~l~l~~N~l~g~ip~~l~--~l~~l~l~~n~~~ 257 (720)
.. + +..|++++|.+++..+..+. +++.|++.+|.+.
T Consensus 174 ~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~ 217 (606)
T 3vq2_A 174 QFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNS 217 (606)
T ss_dssp HHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSC
T ss_pred hhhhccccccceeeccCCCcceeCcccccCceeeeeeccCCccc
Confidence 11 1 55899999999966655443 6888999998764
No 300
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.78 E-value=5e-19 Score=210.47 Aligned_cols=187 Identities=20% Similarity=0.156 Sum_probs=162.2
Q ss_pred CCCceeEecCCCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCC-CCCCC--CccceeccccccCcCCCCccc
Q 005001 73 ESWKGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTI-PYQLP--PNLTSLNLASNNFSGNLPYSI 149 (720)
Q Consensus 73 ~~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~-p~~~~--~~L~~L~L~~N~l~g~~p~~~ 149 (720)
++|..|.+-..+++.|+|++|.+++..+..|.++++|++|+|++|.+.+.+ |..+. ++|++|+|++|+|++..|..|
T Consensus 14 ~~L~~vP~lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~ 93 (844)
T 3j0a_A 14 CNLTQVPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAF 93 (844)
T ss_dssp CCSSCCCSSCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSS
T ss_pred CCCCCCCCCCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHc
Confidence 367777775578999999999999999999999999999999999887777 55554 899999999999999999999
Q ss_pred cccCCccEEEccccccccccccc--cCCCCCCCeeecCCCcccCCCC-ccccCCCCCCeeEeccccccccccccC----C
Q 005001 150 ASMVSLSYLNVSRNSLTQSIGDI--FGNLAGLATLDLSFNNFSGDLP-NSFISLSNISSLYLQNNQVTGSLNVFS----G 222 (720)
Q Consensus 150 ~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~~----~ 222 (720)
+++++|++|+|++|.+++.+|.. |+++++|++|+|++|++++..| ..|+++++|++|+|++|+|++..+... .
T Consensus 94 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~ 173 (844)
T 3j0a_A 94 QGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQG 173 (844)
T ss_dssp CSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHH
T ss_pred cCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccC
Confidence 99999999999999999977765 9999999999999999997665 579999999999999999998654322 1
Q ss_pred CCcCeEEccCccCcccCcccccc---------cceeeecCCcCCCC
Q 005001 223 LPLTTLNVANNHFSGWIPRELIS---------IRTFIYDGNSFDNG 259 (720)
Q Consensus 223 ~~L~~l~l~~N~l~g~ip~~l~~---------l~~l~l~~n~~~~~ 259 (720)
.+|+.|+|++|.+++.+|..+.. ++.|++.+|.+...
T Consensus 174 ~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~ 219 (844)
T 3j0a_A 174 KTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVD 219 (844)
T ss_dssp CSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTT
T ss_pred CccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchh
Confidence 56999999999999988876543 78899999977643
No 301
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=1.1e-18 Score=172.82 Aligned_cols=149 Identities=23% Similarity=0.313 Sum_probs=133.7
Q ss_pred CEEEccCCCCCCCCCCCCCCccceeccccccCcCCCC-ccccccCCccEEEccccccccccccccCCCCCCCeeecCCCc
Q 005001 110 RKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLP-YSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNN 188 (720)
Q Consensus 110 ~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 188 (720)
+.|++++|.++ .+|..+.+.+++|+|++|+|++..| ..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 14 ~~l~~s~n~l~-~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~ 92 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNR 92 (220)
T ss_dssp TEEECCSSCCS-SCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CEeEeCCCCcc-cCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCc
Confidence 58999999998 6899898999999999999997755 468999999999999999999888899999999999999999
Q ss_pred ccCCCCccccCCCCCCeeEeccccccccccc-cCC-CCcCeEEccCccCcccCccccc---ccceeeecCCcCCCC
Q 005001 189 FSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVANNHFSGWIPRELI---SIRTFIYDGNSFDNG 259 (720)
Q Consensus 189 l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~l~l~~N~l~g~ip~~l~---~l~~l~l~~n~~~~~ 259 (720)
|++..|..|..+++|++|+|++|+|++..+. +.. .+|+.|+|++|+|++..|..|. +|+.|++.+|+|.|.
T Consensus 93 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 93 LENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp CCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred cCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 9988888899999999999999999997654 333 4599999999999988887664 678899999999875
No 302
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.78 E-value=2.3e-19 Score=210.59 Aligned_cols=158 Identities=19% Similarity=0.286 Sum_probs=142.2
Q ss_pred ccccccCCCCCCEEEccCCCCCC-----------------CCCCCCC----CccceeccccccCcCCCCccccccCCccE
Q 005001 99 MGYLLSDLLSLRKFDLSGNSIHD-----------------TIPYQLP----PNLTSLNLASNNFSGNLPYSIASMVSLSY 157 (720)
Q Consensus 99 ~~~~l~~l~~L~~L~L~~N~l~~-----------------~~p~~~~----~~L~~L~L~~N~l~g~~p~~~~~l~~L~~ 157 (720)
+|..|++|++|++|+|++|+|+| .+|..+. ++|++|+|++|++.|.+|..+++|++|+.
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~ 519 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCE
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCE
Confidence 88899999999999999999998 3888874 89999999999999999999999999999
Q ss_pred EEccccc-ccc-ccccccCCCC-------CCCeeecCCCcccCCCCc--cccCCCCCCeeEeccccccccccccCCC-Cc
Q 005001 158 LNVSRNS-LTQ-SIGDIFGNLA-------GLATLDLSFNNFSGDLPN--SFISLSNISSLYLQNNQVTGSLNVFSGL-PL 225 (720)
Q Consensus 158 L~L~~N~-l~~-~~p~~~~~l~-------~L~~L~l~~N~l~g~~p~--~~~~l~~L~~L~l~~N~l~~~~~~~~~~-~L 225 (720)
|+|++|+ |+| .+|..++.++ +|+.|+|++|+|+ .+|. .++++++|++|+|++|+|+ .+|.+... +|
T Consensus 520 L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~L 597 (876)
T 4ecn_A 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVKL 597 (876)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTTSEE
T ss_pred EECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCCCcc
Confidence 9999998 999 8998777665 9999999999999 8999 9999999999999999999 66655444 49
Q ss_pred CeEEccCccCcccCcccc---cc-cceeeecCCcCCCC
Q 005001 226 TTLNVANNHFSGWIPREL---IS-IRTFIYDGNSFDNG 259 (720)
Q Consensus 226 ~~l~l~~N~l~g~ip~~l---~~-l~~l~l~~n~~~~~ 259 (720)
+.|+|++|+|+ .+|..+ .+ |+.|++.+|.+...
T Consensus 598 ~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~~l 634 (876)
T 4ecn_A 598 TDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLKYI 634 (876)
T ss_dssp SEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCCSC
T ss_pred eEEECcCCccc-cchHHHhhccccCCEEECcCCCCCcC
Confidence 99999999999 899766 45 88899999998743
No 303
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.78 E-value=7.3e-19 Score=190.09 Aligned_cols=173 Identities=20% Similarity=0.209 Sum_probs=138.2
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEEc
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 160 (720)
.+++.|+++++.++...+..+..+++|++|+|++|.+++..|..+. ++|++|+|++|++++..|..++++++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 3577899999999876666789999999999999999976665654 89999999999999888888999999999999
Q ss_pred cccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCCCCcCeEEccCccCcccCc
Q 005001 161 SRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIP 240 (720)
Q Consensus 161 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~g~ip 240 (720)
++|+++...+..|+.+++|++|+|++|++++..|..+..+++|++|++++|++++. +.....+|+.|++++|.+++.-
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~l~~L~~L~l~~n~l~~~~- 202 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-DLSLIPSLFHANVSYNLLSTLA- 202 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC-CGGGCTTCSEEECCSSCCSEEE-
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc-ccccccccceeecccccccccC-
Confidence 99999966666689999999999999999988888899999999999999999874 2222334666666666665421
Q ss_pred ccccccceeeecCCcCCC
Q 005001 241 RELISIRTFIYDGNSFDN 258 (720)
Q Consensus 241 ~~l~~l~~l~l~~n~~~~ 258 (720)
...+++.|++.+|.+..
T Consensus 203 -~~~~L~~L~l~~n~l~~ 219 (390)
T 3o6n_A 203 -IPIAVEELDASHNSINV 219 (390)
T ss_dssp -CCSSCSEEECCSSCCCE
T ss_pred -CCCcceEEECCCCeeee
Confidence 11245555555555543
No 304
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.77 E-value=3.6e-18 Score=174.80 Aligned_cols=187 Identities=23% Similarity=0.272 Sum_probs=159.5
Q ss_pred CCCCCCCceeEecC-CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCC
Q 005001 69 DPCGESWKGVACEG-SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNL 145 (720)
Q Consensus 69 ~~c~~~w~gv~c~~-~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~ 145 (720)
+.| .|.|+.|+. ..++.+++++++++. +|..+. ++|++|+|++|++++..+..+. ++|++|+|++|+++...
T Consensus 3 ~~C--~~~~~~C~c~~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 3 ALC--KKDGGVCSCNNNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCB--GGGTCSBEEETTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred ccC--CCCCCCCEeCCCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 556 799999974 457789999999985 565554 6899999999999976665564 89999999999999666
Q ss_pred CccccccCCccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccc-cC-CC
Q 005001 146 PYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FS-GL 223 (720)
Q Consensus 146 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~-~~ 223 (720)
+..+.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+|++..+. +. ..
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 157 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLT 157 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred hhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCc
Confidence 66779999999999999999988888899999999999999999988888899999999999999999987654 33 35
Q ss_pred CcCeEEccCccCcccCcccc---cccceeeecCCcCCCCC
Q 005001 224 PLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDNGP 260 (720)
Q Consensus 224 ~L~~l~l~~N~l~g~ip~~l---~~l~~l~l~~n~~~~~~ 260 (720)
+|+.|+|++|+|++..+..| .+|+.|++.+|.+...+
T Consensus 158 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 197 (270)
T 2o6q_A 158 SLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVP 197 (270)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred ccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCC
Confidence 69999999999997666544 57889999999987544
No 305
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.77 E-value=9.8e-19 Score=200.49 Aligned_cols=180 Identities=19% Similarity=0.135 Sum_probs=153.8
Q ss_pred CceeEecC-----------CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccC
Q 005001 75 WKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNF 141 (720)
Q Consensus 75 w~gv~c~~-----------~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l 141 (720)
+..|.|.. ..++.|+|++|++++..|..|+++++|++|+|++|++++..|..+. ++|++|+|++|++
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 56788964 3689999999999999999999999999999999999988887775 8999999999999
Q ss_pred cCCCCccccccCCccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccc-c
Q 005001 142 SGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-F 220 (720)
Q Consensus 142 ~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~ 220 (720)
++..|..|+++++|++|+|++|++++..|..++++++|++|+|++|++++..+..+..+++|++|+|++|+|++..+. +
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 173 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDM 173 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHH
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhh
Confidence 999999999999999999999999998889999999999999999999974444556699999999999999987543 3
Q ss_pred -CCCCcC--eEEccCccCcccCccccc--ccceeeecCC
Q 005001 221 -SGLPLT--TLNVANNHFSGWIPRELI--SIRTFIYDGN 254 (720)
Q Consensus 221 -~~~~L~--~l~l~~N~l~g~ip~~l~--~l~~l~l~~n 254 (720)
...+|+ .|++++|.+++..|..+. +++.+++.+|
T Consensus 174 ~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~ 212 (606)
T 3t6q_A 174 SSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGT 212 (606)
T ss_dssp HTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTC
T ss_pred hhhcccceeEEecCCCccCccChhHhhhccccccccCCc
Confidence 334577 899999999988876653 3444444444
No 306
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.77 E-value=1.5e-18 Score=190.69 Aligned_cols=174 Identities=18% Similarity=0.217 Sum_probs=112.9
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEEc
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 160 (720)
.+++.|+|++|+|++..+..|.++++|++|+|++|+|++..+..+. ++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 88 ~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l 167 (440)
T 3zyj_A 88 RHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDL 167 (440)
T ss_dssp SSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCC
Confidence 4788999999999988888999999999999999999855554443 78999999999888666667777777777777
Q ss_pred cccc-cccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccc-cCC-CCcCeEEccCccCcc
Q 005001 161 SRNS-LTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVANNHFSG 237 (720)
Q Consensus 161 ~~N~-l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~l~l~~N~l~g 237 (720)
++|+ ++...+..|.++++|++|+|++|+|+ .+| .+..+++|+.|+|++|+|++..+. +.. .+|+.|+|++|+|++
T Consensus 168 ~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 245 (440)
T 3zyj_A 168 GELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQV 245 (440)
T ss_dssp CCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCE
T ss_pred CCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeE
Confidence 7643 33333345666666666666666666 344 255556666666666666554332 222 235555555555554
Q ss_pred cCcccc---cccceeeecCCcCCC
Q 005001 238 WIPREL---ISIRTFIYDGNSFDN 258 (720)
Q Consensus 238 ~ip~~l---~~l~~l~l~~n~~~~ 258 (720)
..|..| .+|+.|++.+|.+..
T Consensus 246 ~~~~~~~~l~~L~~L~L~~N~l~~ 269 (440)
T 3zyj_A 246 IERNAFDNLQSLVEINLAHNNLTL 269 (440)
T ss_dssp ECTTSSTTCTTCCEEECTTSCCCC
T ss_pred EChhhhcCCCCCCEEECCCCCCCc
Confidence 444333 344445555555443
No 307
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.77 E-value=7.9e-19 Score=201.26 Aligned_cols=157 Identities=20% Similarity=0.216 Sum_probs=73.5
Q ss_pred ccccCCCCCCEEEccCCCCCCCCC-CCCC--CccceeccccccCcCCCCccccccCCccEEEcccccccc-ccccccCCC
Q 005001 101 YLLSDLLSLRKFDLSGNSIHDTIP-YQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQ-SIGDIFGNL 176 (720)
Q Consensus 101 ~~l~~l~~L~~L~L~~N~l~~~~p-~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l 176 (720)
..+..+++|++|+|++|++++..| ..+. ++|++|+|++|++++.+|..+.++++|++|+|++|.+++ .+|..|+.+
T Consensus 393 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l 472 (606)
T 3vq2_A 393 ANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANT 472 (606)
T ss_dssp CCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTC
T ss_pred hhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccC
Confidence 344444444444444444444433 1221 445555555555554444455555555555555555554 244445555
Q ss_pred CCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccc-cCC-CCcCeEEccCccCcccCccccc----ccceee
Q 005001 177 AGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVANNHFSGWIPRELI----SIRTFI 250 (720)
Q Consensus 177 ~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~l~l~~N~l~g~ip~~l~----~l~~l~ 250 (720)
++|+.|+|++|++++..|..+..+++|++|+|++|++++.+|. +.. .+|+.|+|++|+|+ .+|..+. +++.++
T Consensus 473 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~ 551 (606)
T 3vq2_A 473 TNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFN 551 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEE
T ss_pred CCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEE
Confidence 5555555555555544444455555555555555555544332 221 23555555555554 3443321 244455
Q ss_pred ecCCcCCC
Q 005001 251 YDGNSFDN 258 (720)
Q Consensus 251 l~~n~~~~ 258 (720)
+.+|++.|
T Consensus 552 l~~N~~~c 559 (606)
T 3vq2_A 552 LTNNSVAC 559 (606)
T ss_dssp CCSCCCCC
T ss_pred ccCCCccc
Confidence 55555544
No 308
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.77 E-value=3.9e-20 Score=215.12 Aligned_cols=193 Identities=23% Similarity=0.204 Sum_probs=66.5
Q ss_pred ChHHHHHHHHHHHhcCCCC--CCCCCCCCCCCCCCCCCceeEecCCCEEEEEcCCCCCcccccccccCCCCCCEEEccCC
Q 005001 40 DSSDVQALQVLYTSLNSPS--VLTNWKGNEGDPCGESWKGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGN 117 (720)
Q Consensus 40 ~~~d~~al~~~~~~~~~~~--~l~~w~~~~~~~c~~~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N 117 (720)
...+.++|+++..++.... .-..|.......+ +|.++.++..+++.|+|.+|++... +..+ |+.++|+.|
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~~~~~l~L~~n~~~~~-~~~~-----l~~l~Ls~~ 201 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSG--TATNSAVSTPLTPKIELFANGKDEA-NQAL-----LQHKKLSQY 201 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCCCCccc--cCCCceecCCccceEEeeCCCCCcc-hhhH-----hhcCccCcc
Confidence 3457789999987764432 2345654433333 7999999988888888877766542 2111 122222222
Q ss_pred CCCC---------CCCCCCC--CccceeccccccCcCCCCccccccCCccEEEccccccccccccccCCCCCCCeeecCC
Q 005001 118 SIHD---------TIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSF 186 (720)
Q Consensus 118 ~l~~---------~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 186 (720)
.|.+ ..|..+. ++|+.|+|++|.|. .+|..+.++++|++|+|++|.|+ .+|..|++|++|++|+|++
T Consensus 202 ~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~ 279 (727)
T 4b8c_D 202 SIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSH 279 (727)
T ss_dssp --------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTT
T ss_pred cccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcC
Confidence 2221 1122221 44555555555554 44444445555555555555555 4444455555555555555
Q ss_pred CcccCCCCccccCCCCCCeeEeccccccccccccCC-CCcCeEEccCccCcccCcccc
Q 005001 187 NNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSG-LPLTTLNVANNHFSGWIPREL 243 (720)
Q Consensus 187 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~l~l~~N~l~g~ip~~l 243 (720)
|+|+ .+|..|+.|++|++|+|++|.|+..+..+.. .+|+.|+|++|.|+|.+|..+
T Consensus 280 N~l~-~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~ 336 (727)
T 4b8c_D 280 NRLT-SLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKIL 336 (727)
T ss_dssp SCCS-SCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCCCSHHHHHH
T ss_pred CcCC-ccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCccCCCChHHH
Confidence 5555 4455555555555555555555432222222 235555555555555544444
No 309
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.77 E-value=2.8e-19 Score=198.79 Aligned_cols=171 Identities=20% Similarity=0.246 Sum_probs=139.7
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCC-------------------CCCCCCCCccceeccccccCcC
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHD-------------------TIPYQLPPNLTSLNLASNNFSG 143 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~-------------------~~p~~~~~~L~~L~L~~N~l~g 143 (720)
.+++.|+|++|.+++.+| ++.+++|++|+|++|.|++ ..+. ..++|+.|+|++|.|++
T Consensus 58 ~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~~~~~~-~l~~L~~L~L~~N~l~~ 134 (487)
T 3oja_A 58 TKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCS-RGQGKKNIYLANNKITM 134 (487)
T ss_dssp TTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCCCEEEC-CCSSCEEEECCSSCCCS
T ss_pred CCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCCCCCcc-ccCCCCEEECCCCCCCC
Confidence 467777777777776555 6666666666666665543 2222 23789999999999999
Q ss_pred CCCccccccCCccEEEccccccccccccccC-CCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCC
Q 005001 144 NLPYSIASMVSLSYLNVSRNSLTQSIGDIFG-NLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSG 222 (720)
Q Consensus 144 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 222 (720)
..|..++++++|++|+|++|.|++.+|..+. .+++|+.|+|++|+|++. |. +..+++|++|+|++|+|++.++.+..
T Consensus 135 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~ 212 (487)
T 3oja_A 135 LRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQS 212 (487)
T ss_dssp GGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGG
T ss_pred CCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCEEECCCCCCCCCCHhHcC
Confidence 9999999999999999999999999998886 799999999999999965 33 44699999999999999998776544
Q ss_pred -CCcCeEEccCccCcccCcccc---cccceeeecCCcCCCC
Q 005001 223 -LPLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDNG 259 (720)
Q Consensus 223 -~~L~~l~l~~N~l~g~ip~~l---~~l~~l~l~~n~~~~~ 259 (720)
.+|+.|+|++|.|++ +|..+ .+++.|++.+|++.|+
T Consensus 213 l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 213 AAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp GTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHH
T ss_pred CCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCc
Confidence 459999999999996 67655 5788899999999865
No 310
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.77 E-value=1.6e-18 Score=191.29 Aligned_cols=174 Identities=19% Similarity=0.200 Sum_probs=115.3
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEEc
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 160 (720)
.+++.|+|++|+|++..+..|.++++|++|+|++|+|++..+..+. ++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 99 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 178 (452)
T 3zyi_A 99 HHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDL 178 (452)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeC
Confidence 5789999999999998889999999999999999999955554443 78999999999998666667777777777777
Q ss_pred ccc-ccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccc-cCC-CCcCeEEccCccCcc
Q 005001 161 SRN-SLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVANNHFSG 237 (720)
Q Consensus 161 ~~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~l~l~~N~l~g 237 (720)
++| .+....+..|..+++|++|+|++|+|++ +| .+..+++|+.|+|++|+|++..+. +.. .+|+.|+|++|+|++
T Consensus 179 ~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 256 (452)
T 3zyi_A 179 GELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSL 256 (452)
T ss_dssp CCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCE
T ss_pred CCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCce
Confidence 763 3333333456666666666666666663 33 355566666666666666554332 222 235555555555555
Q ss_pred cCcccc---cccceeeecCCcCCC
Q 005001 238 WIPREL---ISIRTFIYDGNSFDN 258 (720)
Q Consensus 238 ~ip~~l---~~l~~l~l~~n~~~~ 258 (720)
..|..| .+|+.|++.+|.+..
T Consensus 257 ~~~~~~~~l~~L~~L~L~~N~l~~ 280 (452)
T 3zyi_A 257 IERNAFDGLASLVELNLAHNNLSS 280 (452)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSC
T ss_pred ECHHHhcCCCCCCEEECCCCcCCc
Confidence 444433 344455555555543
No 311
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=2.6e-18 Score=171.12 Aligned_cols=151 Identities=22% Similarity=0.235 Sum_probs=132.1
Q ss_pred CCEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEccccccccccccccCCCCCCCeeecCCCc
Q 005001 109 LRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNN 188 (720)
Q Consensus 109 L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 188 (720)
.+.+++++|+++ .+|..+.++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~ 99 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQ 99 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCEeEccCCCcC-ccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCc
Confidence 356888899988 8999899999999999999999889999999999999999999988777889999999999999999
Q ss_pred ccCCCCccccCCCCCCeeEeccccccccccccC-CCCcCeEEccCccCcccCcccc---cccceeeecCCcCCCCC
Q 005001 189 FSGDLPNSFISLSNISSLYLQNNQVTGSLNVFS-GLPLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDNGP 260 (720)
Q Consensus 189 l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~-~~~L~~l~l~~N~l~g~ip~~l---~~l~~l~l~~n~~~~~~ 260 (720)
|++..+..|..+++|++|+|++|+|+.....+. ..+|+.|+|++|+|++..+..+ .+|+.|++.+|++.|..
T Consensus 100 l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 100 LTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred CCccChhHhCcchhhCeEeccCCcccccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 997777778999999999999999996544443 3469999999999997655544 57889999999998753
No 312
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.77 E-value=2.3e-18 Score=170.42 Aligned_cols=149 Identities=22% Similarity=0.276 Sum_probs=132.5
Q ss_pred CEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEccccccccccccccCCCCCCCeeecCCCcc
Q 005001 110 RKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNF 189 (720)
Q Consensus 110 ~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 189 (720)
+.+++++|.++ .+|..+.++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l 92 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI 92 (220)
T ss_dssp TEEECTTSCCS-SCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCC
T ss_pred CEEEcCCCCcC-cCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcC
Confidence 57899999999 78988889999999999999987778999999999999999999999999999999999999999999
Q ss_pred cCCCCccccCCCCCCeeEeccccccccccc-cCC-CCcCeEEccCccCcccCcccc---cccceeeecCCcCCCC
Q 005001 190 SGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDNG 259 (720)
Q Consensus 190 ~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~l~l~~N~l~g~ip~~l---~~l~~l~l~~n~~~~~ 259 (720)
++..+..|..+++|++|+|++|+|++..+. +.. .+|+.|+|++|+|++..+..| .+++.|++.+|+|.|.
T Consensus 93 ~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 93 TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 965555678999999999999999997654 333 469999999999998776655 5678899999999874
No 313
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.77 E-value=1.9e-18 Score=180.39 Aligned_cols=171 Identities=18% Similarity=0.293 Sum_probs=137.1
Q ss_pred CCCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEcc
Q 005001 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (720)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~ 161 (720)
..+++.|+|++|++++..+ +..+++|++|+|++|.+++.....-.++|++|+|++|++++ ++. +..+++|++|+|+
T Consensus 62 l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~ 137 (308)
T 1h6u_A 62 LNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLD 137 (308)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCCGGGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECC
T ss_pred cCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCchhhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECC
Confidence 3578899999999987655 88999999999999998864322223789999999999985 443 8899999999999
Q ss_pred ccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCCCCcCeEEccCccCcccCc-
Q 005001 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIP- 240 (720)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~g~ip- 240 (720)
+|++++..+ ++.+++|++|+|++|++++ ++. +..+++|+.|+|++|+|++..+.....+|+.|+|++|++++..|
T Consensus 138 ~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~~~~~l 213 (308)
T 1h6u_A 138 LNQITNISP--LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDVSPL 213 (308)
T ss_dssp SSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECTTSCCCBCGGG
T ss_pred CCccCcCcc--ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEECCCCccCcChhhcCCCCCCEEEccCCccCccccc
Confidence 999987654 8889999999999999985 444 88899999999999999887665555669999999999986554
Q ss_pred ccccccceeeecCCcCCCCC
Q 005001 241 RELISIRTFIYDGNSFDNGP 260 (720)
Q Consensus 241 ~~l~~l~~l~l~~n~~~~~~ 260 (720)
..+.+|+.|++.+|++.+.+
T Consensus 214 ~~l~~L~~L~l~~N~i~~~~ 233 (308)
T 1h6u_A 214 ANTSNLFIVTLTNQTITNQP 233 (308)
T ss_dssp TTCTTCCEEEEEEEEEECCC
T ss_pred cCCCCCCEEEccCCeeecCC
Confidence 24467888899999887644
No 314
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.76 E-value=1.6e-18 Score=198.61 Aligned_cols=175 Identities=23% Similarity=0.204 Sum_probs=111.1
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCC-CC--CccceeccccccCcCCCCccccccCCccEEEc
Q 005001 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQ-LP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (720)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~-~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 160 (720)
+++.|+|++|.+.+..+..+..+++|++|+|++|.+++..|.. +. ++|++|+|++|.+++..|..+.++++|++|+|
T Consensus 377 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 456 (606)
T 3t6q_A 377 HLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNL 456 (606)
T ss_dssp TCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEEC
Confidence 5666666666666666666666666666666666666555433 22 56667777777766666666666777777777
Q ss_pred cccccccc---cccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccc-cCC-CCcCeEEccCccC
Q 005001 161 SRNSLTQS---IGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVANNHF 235 (720)
Q Consensus 161 ~~N~l~~~---~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~l~l~~N~l 235 (720)
++|.+++. .+..+..+++|++|+|++|++++..|..|..+++|++|+|++|+|++..+. +.. ..| .|+|++|++
T Consensus 457 ~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l 535 (606)
T 3t6q_A 457 QGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHI 535 (606)
T ss_dssp TTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCC
T ss_pred CCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcc
Confidence 77766652 224566667777777777777666666666777777777777777665442 222 236 677777777
Q ss_pred cccCcccc---cccceeeecCCcCCCC
Q 005001 236 SGWIPREL---ISIRTFIYDGNSFDNG 259 (720)
Q Consensus 236 ~g~ip~~l---~~l~~l~l~~n~~~~~ 259 (720)
++.+|..+ .+++.+++.+|++.|.
T Consensus 536 ~~~~~~~~~~l~~L~~L~l~~N~~~c~ 562 (606)
T 3t6q_A 536 SIILPSLLPILSQQRTINLRQNPLDCT 562 (606)
T ss_dssp CCCCGGGHHHHHTSSEEECTTCCEECS
T ss_pred cccCHhhcccCCCCCEEeCCCCCcccc
Confidence 76665543 4566677777776654
No 315
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.76 E-value=4.7e-18 Score=179.32 Aligned_cols=174 Identities=17% Similarity=0.262 Sum_probs=148.1
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEccc
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 162 (720)
.+++.|+|++|++++..|..|+++++|++|+|++|+++ .+|..+.++|++|+|++|++++..+..+.++++|+.|+|++
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 154 (330)
T 1xku_A 76 KNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGT 154 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCS
T ss_pred CCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhcccccEEECCCCcccccCHhHhcCCccccEEECCC
Confidence 57999999999999998999999999999999999999 78888889999999999999988788899999999999999
Q ss_pred ccccc--ccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEecccccccccc-ccCC-CCcCeEEccCccCccc
Q 005001 163 NSLTQ--SIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLN-VFSG-LPLTTLNVANNHFSGW 238 (720)
Q Consensus 163 N~l~~--~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~-~~L~~l~l~~N~l~g~ 238 (720)
|.++. ..+..+..+++|++|++++|+++ .+|..+. ++|++|+|++|+|++..+ .+.. .+|+.|+|++|++++.
T Consensus 155 n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 231 (330)
T 1xku_A 155 NPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAV 231 (330)
T ss_dssp SCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEE
T ss_pred CcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCcee
Confidence 99964 77888999999999999999998 5776554 788999999999888654 3333 4588899999988877
Q ss_pred Ccccc---cccceeeecCCcCCCCC
Q 005001 239 IPREL---ISIRTFIYDGNSFDNGP 260 (720)
Q Consensus 239 ip~~l---~~l~~l~l~~n~~~~~~ 260 (720)
.|..+ .+|+.|++.+|.+...|
T Consensus 232 ~~~~~~~l~~L~~L~L~~N~l~~lp 256 (330)
T 1xku_A 232 DNGSLANTPHLRELHLNNNKLVKVP 256 (330)
T ss_dssp CTTTGGGSTTCCEEECCSSCCSSCC
T ss_pred ChhhccCCCCCCEEECCCCcCccCC
Confidence 66544 46778888888887443
No 316
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.76 E-value=6.7e-18 Score=192.92 Aligned_cols=176 Identities=19% Similarity=0.217 Sum_probs=135.6
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEEc
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 160 (720)
.+++.|+|++|.+++..+..|+.+++|++|+|++|.|++..|..+. ++|++|+|++|.|++..+..|+++++|++|+|
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 4688899999999988888999999999999999999977766554 78999999999988655556788899999999
Q ss_pred cccccccccccccCCCCCCCeeecCCCcccCCC-----------------------------------------------
Q 005001 161 SRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDL----------------------------------------------- 193 (720)
Q Consensus 161 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~----------------------------------------------- 193 (720)
++|.|++..|..|+.+++|++|+|++|+|++..
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~L 234 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVEL 234 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSCC
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCCC
Confidence 999988888888888888888888888776421
Q ss_pred ------------CccccCCCCCCeeEeccccccccccc-cCC-CCcCeEEccCccCcccCccc---ccccceeeecCCcC
Q 005001 194 ------------PNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVANNHFSGWIPRE---LISIRTFIYDGNSF 256 (720)
Q Consensus 194 ------------p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~l~l~~N~l~g~ip~~---l~~l~~l~l~~n~~ 256 (720)
+..++.+++|+.|+|++|.|++.++. +.. .+|+.|+|++|.|++ +|.. +.+|+.|++.+|.+
T Consensus 235 ~~L~L~~n~l~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l 313 (597)
T 3oja_B 235 TILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHL 313 (597)
T ss_dssp CEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCC
T ss_pred CEEECCCCCCCCChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCC
Confidence 12355667788888888888876543 332 458888888888876 3433 45777788888877
Q ss_pred CCC
Q 005001 257 DNG 259 (720)
Q Consensus 257 ~~~ 259 (720)
...
T Consensus 314 ~~i 316 (597)
T 3oja_B 314 LHV 316 (597)
T ss_dssp CCC
T ss_pred Ccc
Confidence 643
No 317
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.75 E-value=2.5e-18 Score=167.14 Aligned_cols=152 Identities=16% Similarity=0.254 Sum_probs=118.6
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEccc
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 162 (720)
.+++.|++++|+++ .++ .+..+++|++|+|++|.++..-+..-.++|++|+|++|++++..|..++++++|++|+|++
T Consensus 44 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~ 121 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATNYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISH 121 (197)
T ss_dssp HTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSCCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCS
T ss_pred CCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCcchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecC
Confidence 36888999999888 445 6888999999999999776432333347899999999999887888888999999999999
Q ss_pred cccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCCCCcCeEEccCccCcc
Q 005001 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSG 237 (720)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~g 237 (720)
|++++..|..++.+++|++|+|++|++.+.+| .+..+++|++|++++|+|++..+.....+|+.|++++|+|.+
T Consensus 122 n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~~~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 122 SAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp SBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCCTTGGGCSSCCEEEECBC----
T ss_pred CccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcChHHhccCCCCCEEEeeCcccCC
Confidence 99988888888899999999999998333566 688888999999999988875544444568888888888764
No 318
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.75 E-value=1.4e-18 Score=176.30 Aligned_cols=140 Identities=20% Similarity=0.175 Sum_probs=106.3
Q ss_pred CCccceeccCCCcEEEEEEE-cCCcE--EEEEEccccccC----------------------hHHHHHHHHHHHHhhcCC
Q 005001 412 FSQEFLIGEGSLGRVYRAEF-ANGKI--MAVKKIDNAALS----------------------LQEEDNFLEAVSNMSRLR 466 (720)
Q Consensus 412 y~~~~~lG~G~fg~Vy~~~~-~~~~~--vavK~~~~~~~~----------------------~~~~~~~~~e~~~l~~l~ 466 (720)
|...+.||+|+||.||+|.+ .+|+. ||||+++..... ......+.+|+..+.++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999987 68989 999987543211 011246788999999998
Q ss_pred CCCccccceEEeecCeEEEEEEecCC-C----CHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCcEEec
Q 005001 467 HPNIVTLAGYCAEHGQRLLVYEYVGN-G----NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLH-EVCLPSVVHRN 540 (720)
Q Consensus 467 h~niv~l~~~~~~~~~~~lV~e~~~~-g----sL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH-~~~~~~iiH~D 540 (720)
|+++.-..-+.. +..++||||+.+ | +|.++... .++..+..++.|++.||.||| +. +|+|||
T Consensus 129 ~~~i~~p~~~~~--~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~~~---givHrD 196 (258)
T 1zth_A 129 EAGVSVPQPYTY--MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQEA---ELVHAD 196 (258)
T ss_dssp HTTCCCCCEEEE--ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHHTS---CEECSS
T ss_pred hCCCCCCeEEEc--CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHHHC---CEEeCC
Confidence 886532222222 356899999942 3 67766531 124457789999999999999 87 999999
Q ss_pred CCCCCEEeCCCCceEEcccCCCccC
Q 005001 541 FKSANILLDDELNPHLSDCGLAALT 565 (720)
Q Consensus 541 lkp~NIll~~~~~~kl~Dfg~a~~~ 565 (720)
|||+|||++. .++|+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999998 9999999999754
No 319
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.75 E-value=1.1e-17 Score=180.82 Aligned_cols=127 Identities=21% Similarity=0.216 Sum_probs=103.9
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEEc
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 160 (720)
.+++.|+|++|++++..+..|..+++|++|+|++|.+++..|..+. ++|++|+|++|+++...+..+.++++|++|+|
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 148 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 148 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEEC
Confidence 4688999999999988888999999999999999999987776654 89999999999999544445789999999999
Q ss_pred cccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEecccc
Q 005001 161 SRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQ 212 (720)
Q Consensus 161 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~ 212 (720)
++|++++..|..|+.+++|++|+|++|++++.. +..+++|+.|++++|.
T Consensus 149 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~ 197 (390)
T 3o6n_A 149 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNL 197 (390)
T ss_dssp CSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSSC
T ss_pred CCCccCccChhhccCCCCCCEEECCCCcCCccc---cccccccceeeccccc
Confidence 999999988889999999999999999998642 3334444443333333
No 320
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.75 E-value=4.9e-18 Score=192.79 Aligned_cols=177 Identities=21% Similarity=0.298 Sum_probs=136.5
Q ss_pred CEEEEEcCCCCCcccccccc-----cCCC--------------------------CCCEEEccCCCCCCCCCCCCCCccc
Q 005001 84 AVVSIDISGLGLSGTMGYLL-----SDLL--------------------------SLRKFDLSGNSIHDTIPYQLPPNLT 132 (720)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~l-----~~l~--------------------------~L~~L~L~~N~l~~~~p~~~~~~L~ 132 (720)
+++.|++++|.++|.+|..+ .+++ +|++|++++|.+.........++|+
T Consensus 277 ~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~ 356 (562)
T 3a79_B 277 PVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFT 356 (562)
T ss_dssp SEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCC
T ss_pred cccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCce
Confidence 78999999999998888776 3433 3666666666665322113447889
Q ss_pred eeccccccCcCCCCccccccCCccEEEcccccccc--ccccccCCCCCCCeeecCCCcccCCCCcc-ccCCCCCCeeEec
Q 005001 133 SLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQ--SIGDIFGNLAGLATLDLSFNNFSGDLPNS-FISLSNISSLYLQ 209 (720)
Q Consensus 133 ~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~~~l~~L~~L~l~ 209 (720)
+|+|++|++++.+|..++++++|++|+|++|++++ .+|..++.+++|++|+|++|++++.+|.. +..+++|++|+|+
T Consensus 357 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~ 436 (562)
T 3a79_B 357 FLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLS 436 (562)
T ss_dssp EEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECC
T ss_pred EEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECC
Confidence 99999999998888888899999999999999887 44677888899999999999998756654 7788889999999
Q ss_pred cccccccccccCCCCcCeEEccCccCcccCcccc---cccceeeecCCcCCCCCC
Q 005001 210 NNQVTGSLNVFSGLPLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDNGPA 261 (720)
Q Consensus 210 ~N~l~~~~~~~~~~~L~~l~l~~N~l~g~ip~~l---~~l~~l~l~~n~~~~~~~ 261 (720)
+|+|++.++.....+|+.|+|++|+|+ .+|..+ .+|+.|++.+|.+...|.
T Consensus 437 ~n~l~~~~~~~l~~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~ 490 (562)
T 3a79_B 437 SNMLTGSVFRCLPPKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPD 490 (562)
T ss_dssp SSCCCGGGGSSCCTTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCT
T ss_pred CCCCCcchhhhhcCcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCH
Confidence 999888766544456888999999888 677654 467788888888875443
No 321
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.75 E-value=1.2e-18 Score=182.82 Aligned_cols=169 Identities=20% Similarity=0.169 Sum_probs=125.6
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEccc
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 162 (720)
.+++.|+|++|.+++..+ +..+++|++|+|++|+|++..+ .++|++|+|++|++++..+. .+++|++|+|++
T Consensus 58 ~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~~---~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~ 129 (317)
T 3o53_A 58 TKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV---GPSIETLHAANNNISRVSCS---RGQGKKNIYLAN 129 (317)
T ss_dssp TTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEEE---CTTCCEEECCSSCCSEEEEC---CCSSCEEEECCS
T ss_pred CcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccccC---CCCcCEEECCCCccCCcCcc---ccCCCCEEECCC
Confidence 467777777777766554 6677777777777777664322 16677777777777754433 367888999999
Q ss_pred cccccccccccCCCCCCCeeecCCCcccCCCCcccc-CCCCCCeeEeccccccccccccCCCCcCeEEccCccCcccCcc
Q 005001 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFI-SLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPR 241 (720)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~g~ip~ 241 (720)
|++++..+..++.+++|++|+|++|++++..|..+. .+++|++|+|++|+|++........+|+.|+|++|+|++..|.
T Consensus 130 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~l~~L~~L~Ls~N~l~~l~~~ 209 (317)
T 3o53_A 130 NKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAFMGPE 209 (317)
T ss_dssp SCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCEECGG
T ss_pred CCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccccccccccCCEEECCCCcCCcchhh
Confidence 999888888888889999999999999877777664 7889999999999988875555556699999999999864443
Q ss_pred --cccccceeeecCCcCCCC
Q 005001 242 --ELISIRTFIYDGNSFDNG 259 (720)
Q Consensus 242 --~l~~l~~l~l~~n~~~~~ 259 (720)
.+.+|+.|++.+|.+...
T Consensus 210 ~~~l~~L~~L~L~~N~l~~l 229 (317)
T 3o53_A 210 FQSAAGVTWISLRNNKLVLI 229 (317)
T ss_dssp GGGGTTCSEEECTTSCCCEE
T ss_pred hcccCcccEEECcCCcccch
Confidence 235788889999988743
No 322
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.74 E-value=8.7e-18 Score=164.74 Aligned_cols=174 Identities=22% Similarity=0.247 Sum_probs=142.8
Q ss_pred eeEecCCCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCC
Q 005001 77 GVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVS 154 (720)
Q Consensus 77 gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~ 154 (720)
+-.|.. +.+++++++++.. |..+ .++|++|+|++|++++..+..+. ++|++|+|++|+|++..+..+.++++
T Consensus 4 ~C~C~~---~~v~c~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 77 (208)
T 2o6s_A 4 RCSCSG---TTVECYSQGRTSV-PTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTS 77 (208)
T ss_dssp TCEEET---TEEECCSSCCSSC-CSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTT
T ss_pred CCEECC---CEEEecCCCccCC-CCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCC
Confidence 345653 4678889888754 4333 46899999999999965554443 89999999999999776677899999
Q ss_pred ccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccc-cC-CCCcCeEEccC
Q 005001 155 LSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FS-GLPLTTLNVAN 232 (720)
Q Consensus 155 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~-~~~L~~l~l~~ 232 (720)
|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+. +. ..+|+.|+|++
T Consensus 78 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 157 (208)
T 2o6s_A 78 LTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHD 157 (208)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS
T ss_pred cCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecC
Confidence 99999999999988888899999999999999999977777789999999999999999987664 33 34699999999
Q ss_pred ccCcccCcccccccceeeecCCcCCCCC
Q 005001 233 NHFSGWIPRELISIRTFIYDGNSFDNGP 260 (720)
Q Consensus 233 N~l~g~ip~~l~~l~~l~l~~n~~~~~~ 260 (720)
|.+.+..| +++.|.+..|.+....
T Consensus 158 N~~~~~~~----~l~~L~~~~n~~~g~i 181 (208)
T 2o6s_A 158 NPWDCTCP----GIRYLSEWINKHSGVV 181 (208)
T ss_dssp CCBCCCTT----TTHHHHHHHHHCTTTB
T ss_pred CCeecCCC----CHHHHHHHHHhCCcee
Confidence 99987654 5777778888877543
No 323
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.74 E-value=3.6e-18 Score=171.35 Aligned_cols=170 Identities=18% Similarity=0.229 Sum_probs=144.8
Q ss_pred CCEEEEEcCCCC-CcccccccccCCCCCCEEEccC-CCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCcc--
Q 005001 83 SAVVSIDISGLG-LSGTMGYLLSDLLSLRKFDLSG-NSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLS-- 156 (720)
Q Consensus 83 ~~v~~l~l~~~~-l~g~~~~~l~~l~~L~~L~L~~-N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~-- 156 (720)
.+++.|+|++|+ +++..+..|.++++|++|+|++ |++++..+..+. ++|++|+|++|++++ +|. +.++++|+
T Consensus 55 ~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L 132 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIF 132 (239)
T ss_dssp TTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSE
T ss_pred CCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccc
Confidence 579999999997 8877777999999999999999 999965555543 799999999999996 776 88899988
Q ss_pred -EEEcccc-ccccccccccCCCCCCC-eeecCCCcccCCCCccccCCCCCCeeEecccc-ccccccc-cCC--CCcCeEE
Q 005001 157 -YLNVSRN-SLTQSIGDIFGNLAGLA-TLDLSFNNFSGDLPNSFISLSNISSLYLQNNQ-VTGSLNV-FSG--LPLTTLN 229 (720)
Q Consensus 157 -~L~L~~N-~l~~~~p~~~~~l~~L~-~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~-l~~~~~~-~~~--~~L~~l~ 229 (720)
+|+|++| ++++..+..|..+++|+ .|+|++|+++ .+|......++|+.|+|++|+ |++..+. +.. .+|+.|+
T Consensus 133 ~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~ 211 (239)
T 2xwt_C 133 FILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLD 211 (239)
T ss_dssp EEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEE
T ss_pred cEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEE
Confidence 9999999 99988888899999999 9999999999 677665555899999999995 9876543 444 4699999
Q ss_pred ccCccCcccCcccccccceeeecCCc
Q 005001 230 VANNHFSGWIPRELISIRTFIYDGNS 255 (720)
Q Consensus 230 l~~N~l~g~ip~~l~~l~~l~l~~n~ 255 (720)
|++|+|++..+..+.+++.|.+.++.
T Consensus 212 l~~N~l~~l~~~~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 212 VSQTSVTALPSKGLEHLKELIARNTW 237 (239)
T ss_dssp CTTCCCCCCCCTTCTTCSEEECTTC-
T ss_pred CCCCccccCChhHhccCceeeccCcc
Confidence 99999996555678899999987763
No 324
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.74 E-value=5.9e-18 Score=188.12 Aligned_cols=175 Identities=17% Similarity=0.226 Sum_probs=136.4
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEEc
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 160 (720)
.+++.|+|++|.+++..|..|.++++|++|+|++|++++..+..+. ++|++|+|++|++++..|..+.++++|++|+|
T Consensus 56 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 135 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEV 135 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEE
T ss_pred CCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEEC
Confidence 5789999999999998899999999999999999999854443343 79999999999999888889999999999999
Q ss_pred cccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccc-cCC-CCcCeEEccCccCccc
Q 005001 161 SRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVANNHFSGW 238 (720)
Q Consensus 161 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~l~l~~N~l~g~ 238 (720)
++|.+++..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|++++..+. +.. .+|+.|+|++|.+.+.
T Consensus 136 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~ 215 (477)
T 2id5_A 136 GDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDT 215 (477)
T ss_dssp CCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCE
T ss_pred CCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccc
Confidence 99999988888999999999999999999876666688888888888888888775542 222 2366666666555555
Q ss_pred Ccccc---cccceeeecCCcCC
Q 005001 239 IPREL---ISIRTFIYDGNSFD 257 (720)
Q Consensus 239 ip~~l---~~l~~l~l~~n~~~ 257 (720)
+|..+ .+|+.|++.+|.+.
T Consensus 216 ~~~~~~~~~~L~~L~l~~n~l~ 237 (477)
T 2id5_A 216 MTPNCLYGLNLTSLSITHCNLT 237 (477)
T ss_dssp ECTTTTTTCCCSEEEEESSCCC
T ss_pred cCcccccCccccEEECcCCccc
Confidence 44432 14455555555444
No 325
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.74 E-value=5.9e-18 Score=194.81 Aligned_cols=172 Identities=20% Similarity=0.205 Sum_probs=128.6
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEEcc
Q 005001 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (720)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~ 161 (720)
.++.|||++|+|++..+..|.++++|++|||++|+|++..|..+. ++|++|+|++|+|++..+..|.+|++|++|+|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECC
Confidence 578888888888887777888888888888888888865555554 788888888888886666778888888888888
Q ss_pred ccccccccccccCCCCCCCeeecCCCcccC-CCCccccCCCCCCeeEeccccccccccccC----C--CCcCeEEccCcc
Q 005001 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSG-DLPNSFISLSNISSLYLQNNQVTGSLNVFS----G--LPLTTLNVANNH 234 (720)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~----~--~~L~~l~l~~N~ 234 (720)
+|+|++..+..|+++++|++|+|++|++++ .+|..++.+++|++|+|++|+|++..+... . ..+..++++.|.
T Consensus 133 ~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~ 212 (635)
T 4g8a_A 133 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 212 (635)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred CCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCc
Confidence 888888777788888888888888888875 457777888888888888888887543211 1 124567888888
Q ss_pred CcccCcccccc--cceeeecCCc
Q 005001 235 FSGWIPRELIS--IRTFIYDGNS 255 (720)
Q Consensus 235 l~g~ip~~l~~--l~~l~l~~n~ 255 (720)
++...|..+.. +..+.+.+|.
T Consensus 213 l~~i~~~~~~~~~~~~l~l~~n~ 235 (635)
T 4g8a_A 213 MNFIQPGAFKEIRLHKLTLRNNF 235 (635)
T ss_dssp CCEECTTTTTTCEEEEEEEESCC
T ss_pred ccccCcccccchhhhhhhhhccc
Confidence 87555544433 2344555553
No 326
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.74 E-value=1.2e-17 Score=194.25 Aligned_cols=178 Identities=19% Similarity=0.198 Sum_probs=127.9
Q ss_pred CCEEEEEcCCCCCccccc-ccccCCCCCCEEEccCCCCCC--------------------------CCCCCCC--Cccce
Q 005001 83 SAVVSIDISGLGLSGTMG-YLLSDLLSLRKFDLSGNSIHD--------------------------TIPYQLP--PNLTS 133 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~-~~l~~l~~L~~L~L~~N~l~~--------------------------~~p~~~~--~~L~~ 133 (720)
.+++.|+|++|.+++.++ ..+..+++|++|+|++|++++ .+|..+. ++|++
T Consensus 405 ~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~ 484 (680)
T 1ziw_A 405 GHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTI 484 (680)
T ss_dssp TTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCE
T ss_pred CCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCE
Confidence 457777888887777665 467777777777777776543 3444443 67788
Q ss_pred eccccccCcCCCCccccccCCccEEEccccccccccc--------cccCCCCCCCeeecCCCcccCCCCccccCCCCCCe
Q 005001 134 LNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIG--------DIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISS 205 (720)
Q Consensus 134 L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p--------~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~ 205 (720)
|+|++|+|++..|..+.++++|++|+|++|++++..+ ..|..+++|++|+|++|+++...+..|.++++|+.
T Consensus 485 L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~ 564 (680)
T 1ziw_A 485 LDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKI 564 (680)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred EECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcce
Confidence 8888888886666677788888888888888776422 23677788888888888888433345788888888
Q ss_pred eEecccccccccccc-CC-CCcCeEEccCccCcccCcc----cccccceeeecCCcCCCCC
Q 005001 206 LYLQNNQVTGSLNVF-SG-LPLTTLNVANNHFSGWIPR----ELISIRTFIYDGNSFDNGP 260 (720)
Q Consensus 206 L~l~~N~l~~~~~~~-~~-~~L~~l~l~~N~l~g~ip~----~l~~l~~l~l~~n~~~~~~ 260 (720)
|+|++|+|++.++.. .. .+|+.|+|++|+|++..|. .+.+++.+++.+|+|.|..
T Consensus 565 L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c 625 (680)
T 1ziw_A 565 IDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTC 625 (680)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCC
T ss_pred eECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCC
Confidence 888888888765543 22 4588888888888877765 3567888888888888764
No 327
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.74 E-value=1.1e-17 Score=173.14 Aligned_cols=169 Identities=21% Similarity=0.266 Sum_probs=143.0
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEccc
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 162 (720)
.+++.|++++|++... +.+..+++|++|+|++|++++..+..-.++|++|+|++|++++ +| .+.++++|++|+|++
T Consensus 46 ~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~ 121 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEH 121 (291)
T ss_dssp HTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTT
T ss_pred CcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcccccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCC
Confidence 4688999999999865 3588999999999999999976664444899999999999995 34 499999999999999
Q ss_pred cccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCCCCcCeEEccCccCcccCcc-
Q 005001 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPR- 241 (720)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~g~ip~- 241 (720)
|++++. +.+..+++|+.|+|++|++++. ..+..+++|++|+|++|+|++..+.....+|+.|+|++|+|++ +|.
T Consensus 122 n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~L~~N~i~~-l~~l 196 (291)
T 1h6t_A 122 NGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD-LRAL 196 (291)
T ss_dssp SCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB-CGGG
T ss_pred CcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchhhcCCCccCEEECCCCcCCC-Chhh
Confidence 999975 5688999999999999999964 5789999999999999999997774455669999999999986 453
Q ss_pred -cccccceeeecCCcCCCCC
Q 005001 242 -ELISIRTFIYDGNSFDNGP 260 (720)
Q Consensus 242 -~l~~l~~l~l~~n~~~~~~ 260 (720)
.+.+|+.|++.+|++...+
T Consensus 197 ~~l~~L~~L~l~~n~i~~~~ 216 (291)
T 1h6t_A 197 AGLKNLDVLELFSQECLNKP 216 (291)
T ss_dssp TTCTTCSEEEEEEEEEECCC
T ss_pred ccCCCCCEEECcCCcccCCc
Confidence 4567889999999987644
No 328
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.74 E-value=1.9e-18 Score=181.23 Aligned_cols=169 Identities=17% Similarity=0.198 Sum_probs=144.3
Q ss_pred CCCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEcc
Q 005001 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (720)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~ 161 (720)
..+++.|+|++|++++.. .+++|++|+|++|++++..+.. .++|++|+|++|++++..|..++.+++|++|+|+
T Consensus 79 l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~-~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls 152 (317)
T 3o53_A 79 LSTLRTLDLNNNYVQELL-----VGPSIETLHAANNNISRVSCSR-GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLK 152 (317)
T ss_dssp CTTCCEEECCSSEEEEEE-----ECTTCCEEECCSSCCSEEEECC-CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECT
T ss_pred cCCCCEEECcCCcccccc-----CCCCcCEEECCCCccCCcCccc-cCCCCEEECCCCCCCCccchhhhccCCCCEEECC
Confidence 357999999999998643 3489999999999999655544 5889999999999998888899999999999999
Q ss_pred ccccccccccccC-CCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCC-CCcCeEEccCccCcccC
Q 005001 162 RNSLTQSIGDIFG-NLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSG-LPLTTLNVANNHFSGWI 239 (720)
Q Consensus 162 ~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~l~l~~N~l~g~i 239 (720)
+|.+++..+..+. .+++|++|+|++|++++. |. ...+++|++|+|++|+|++.++.+.. .+|+.|+|++|+|+ .+
T Consensus 153 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~-~l 229 (317)
T 3o53_A 153 LNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV-LI 229 (317)
T ss_dssp TSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC-EE
T ss_pred CCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCccc-ch
Confidence 9999998888774 799999999999999954 43 44589999999999999987665544 45999999999999 46
Q ss_pred cccc---cccceeeecCCcCCCC
Q 005001 240 PREL---ISIRTFIYDGNSFDNG 259 (720)
Q Consensus 240 p~~l---~~l~~l~l~~n~~~~~ 259 (720)
|..+ .+|+.|++.+|++.|.
T Consensus 230 ~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 230 EKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp CTTCCCCTTCCEEECTTCCCBHH
T ss_pred hhHhhcCCCCCEEEccCCCccCc
Confidence 7655 5788999999999864
No 329
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.74 E-value=2.2e-18 Score=183.62 Aligned_cols=176 Identities=20% Similarity=0.262 Sum_probs=148.3
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCC--CCccceeccccccCcCCCCc--cccccCCccEE
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQL--PPNLTSLNLASNNFSGNLPY--SIASMVSLSYL 158 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~--~~~L~~L~L~~N~l~g~~p~--~~~~l~~L~~L 158 (720)
.+++.|+|++|++++..+..|+++++|++|+|++|++++..+..+ .++|++|+|++|++++ +|. .+.++++|++|
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~L 154 (353)
T 2z80_A 76 VNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQIL 154 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCCcEE
Confidence 579999999999999888999999999999999999995443323 3899999999999995 554 89999999999
Q ss_pred Ecccc-ccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccC--CCCcCeEEccCccC
Q 005001 159 NVSRN-SLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFS--GLPLTTLNVANNHF 235 (720)
Q Consensus 159 ~L~~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~--~~~L~~l~l~~N~l 235 (720)
+|++| .+++..+..|+.+++|++|+|++|++++..|..+..+++|++|++++|+++.....+. ..+|+.|+|++|.+
T Consensus 155 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l 234 (353)
T 2z80_A 155 RVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDL 234 (353)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBC
T ss_pred ECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcc
Confidence 99999 5777778899999999999999999999889999999999999999999976544332 35699999999999
Q ss_pred cccC-------------------------------cc---cccccceeeecCCcCCCC
Q 005001 236 SGWI-------------------------------PR---ELISIRTFIYDGNSFDNG 259 (720)
Q Consensus 236 ~g~i-------------------------------p~---~l~~l~~l~l~~n~~~~~ 259 (720)
++.. |. .+.+|+.|++.+|.+...
T Consensus 235 ~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i 292 (353)
T 2z80_A 235 DTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSV 292 (353)
T ss_dssp TTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCC
T ss_pred ccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCcc
Confidence 8743 32 234778889999988744
No 330
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.74 E-value=6.1e-18 Score=190.11 Aligned_cols=174 Identities=18% Similarity=0.258 Sum_probs=143.2
Q ss_pred CEEEEEcCCCCCcccccccc-----cCCCCCCEEEccCCCCCCCCC----------------------------CCCCCc
Q 005001 84 AVVSIDISGLGLSGTMGYLL-----SDLLSLRKFDLSGNSIHDTIP----------------------------YQLPPN 130 (720)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~l-----~~l~~L~~L~L~~N~l~~~~p----------------------------~~~~~~ 130 (720)
+++.|++++|+++|.+|..+ +++++|+.|++++|.+ .+| ....++
T Consensus 248 ~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~ 325 (520)
T 2z7x_B 248 TVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISP 325 (520)
T ss_dssp SCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCC
T ss_pred cccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCCc
Confidence 67788888888888888877 6676666666666655 333 133478
Q ss_pred cceeccccccCcCCCCccccccCCccEEEcccccccc--ccccccCCCCCCCeeecCCCcccCCCCcc-ccCCCCCCeeE
Q 005001 131 LTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQ--SIGDIFGNLAGLATLDLSFNNFSGDLPNS-FISLSNISSLY 207 (720)
Q Consensus 131 L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~~~l~~L~~L~ 207 (720)
|++|+|++|++++.+|..++++++|++|+|++|++++ .+|..++.+++|++|+|++|++++.+|.. +..+++|++|+
T Consensus 326 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~ 405 (520)
T 2z7x_B 326 FLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLN 405 (520)
T ss_dssp CCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEE
T ss_pred ccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEE
Confidence 9999999999999899999999999999999999997 66788999999999999999999867764 78889999999
Q ss_pred eccccccccccccCCCCcCeEEccCccCcccCcccc---cccceeeecCCcCCCCC
Q 005001 208 LQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDNGP 260 (720)
Q Consensus 208 l~~N~l~~~~~~~~~~~L~~l~l~~N~l~g~ip~~l---~~l~~l~l~~n~~~~~~ 260 (720)
|++|+|++.++.....+|+.|+|++|+|+ .+|..+ .+|+.|++.+|.+...|
T Consensus 406 Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~ 460 (520)
T 2z7x_B 406 MSSNILTDTIFRCLPPRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVP 460 (520)
T ss_dssp CCSSCCCGGGGGSCCTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCC
T ss_pred CcCCCCCcchhhhhcccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccC
Confidence 99999998776655567999999999999 788754 57788999999988544
No 331
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.73 E-value=2.1e-17 Score=170.70 Aligned_cols=153 Identities=20% Similarity=0.200 Sum_probs=134.3
Q ss_pred CCCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEE
Q 005001 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLN 159 (720)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 159 (720)
..+++.|+|++|+|++..+. +.+++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+
T Consensus 54 l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~ 130 (290)
T 1p9a_G 54 YTRLTQLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELY 130 (290)
T ss_dssp CTTCCEEECTTSCCCEEECC--SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCcccCC--CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEE
Confidence 35799999999999875443 89999999999999998 6776654 8999999999999987778999999999999
Q ss_pred ccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccC-CCCcCeEEccCccCcc
Q 005001 160 VSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFS-GLPLTTLNVANNHFSG 237 (720)
Q Consensus 160 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~-~~~L~~l~l~~N~l~g 237 (720)
|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+..+..+. ..+|+.|+|++|.+..
T Consensus 131 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 131 LKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccC
Confidence 99999998888889999999999999999996555667889999999999999997655443 3469999999999963
No 332
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.72 E-value=3.8e-17 Score=170.48 Aligned_cols=170 Identities=23% Similarity=0.332 Sum_probs=144.8
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEccc
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 162 (720)
.+++.|++++++++. ++ .+..+++|++|+|++|.+++..+..-.++|++|+|++|++++ ++ .+.++++|++|+|++
T Consensus 41 ~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~ 116 (308)
T 1h6u_A 41 DGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTS 116 (308)
T ss_dssp HTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGGGTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTT
T ss_pred CCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChhHccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCC
Confidence 478999999999986 34 689999999999999999976663334899999999999995 44 799999999999999
Q ss_pred cccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCCCCcCeEEccCccCcccCc-c
Q 005001 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIP-R 241 (720)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~g~ip-~ 241 (720)
|++++.. .+..+++|++|+|++|++++..+ +..+++|+.|+|++|+|++..+.....+|+.|+|++|++++..+ .
T Consensus 117 n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~l~ 192 (308)
T 1h6u_A 117 TQITDVT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISPLA 192 (308)
T ss_dssp SCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGGGG
T ss_pred CCCCCch--hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChhhcCCCCCCEEECCCCccCcChhhc
Confidence 9999753 39999999999999999996443 89999999999999999987664444569999999999996544 3
Q ss_pred cccccceeeecCCcCCCCC
Q 005001 242 ELISIRTFIYDGNSFDNGP 260 (720)
Q Consensus 242 ~l~~l~~l~l~~n~~~~~~ 260 (720)
.+.+|+.|++.+|.+...+
T Consensus 193 ~l~~L~~L~L~~N~l~~~~ 211 (308)
T 1h6u_A 193 SLPNLIEVHLKNNQISDVS 211 (308)
T ss_dssp GCTTCCEEECTTSCCCBCG
T ss_pred CCCCCCEEEccCCccCccc
Confidence 5578899999999987654
No 333
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.72 E-value=2.5e-17 Score=184.78 Aligned_cols=155 Identities=21% Similarity=0.322 Sum_probs=133.2
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEccc
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 162 (720)
.+++.|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +..+|++|+|++|+|++ +|. .+++|+.|+|++
T Consensus 80 ~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~ 149 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPASLKHLDVDNNQLTM-LPE---LPALLEYINADN 149 (571)
T ss_dssp TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCS
T ss_pred CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhcCCCEEECCCCcCCC-CCC---cCccccEEeCCC
Confidence 46999999999999 566 568999999999999997 888 77899999999999997 777 789999999999
Q ss_pred cccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCCCCc-------CeEEccCccC
Q 005001 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPL-------TTLNVANNHF 235 (720)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L-------~~l~l~~N~l 235 (720)
|+|++ +|. .+++|+.|+|++|+|++ +|. |. ++|+.|+|++|+|+..+. +.. +| +.|+|++|+|
T Consensus 150 N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~lp~-~~~-~L~~~~~~L~~L~Ls~N~l 219 (571)
T 3cvr_A 150 NQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLESLPA-VPV-RNHHSEETEIFFRCRENRI 219 (571)
T ss_dssp SCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCSSCCC-CC---------CCEEEECCSSCC
T ss_pred CccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCCchhh-HHH-hhhcccccceEEecCCCcc
Confidence 99997 665 67899999999999996 887 66 899999999999995444 333 67 9999999999
Q ss_pred cccCcccc---cccceeeecCCcCCC
Q 005001 236 SGWIPREL---ISIRTFIYDGNSFDN 258 (720)
Q Consensus 236 ~g~ip~~l---~~l~~l~l~~n~~~~ 258 (720)
+ .||..+ .+|+.|++.+|++.+
T Consensus 220 ~-~lp~~l~~l~~L~~L~L~~N~l~~ 244 (571)
T 3cvr_A 220 T-HIPENILSLDPTCTIILEDNPLSS 244 (571)
T ss_dssp C-CCCGGGGGSCTTEEEECCSSSCCH
T ss_pred e-ecCHHHhcCCCCCEEEeeCCcCCC
Confidence 9 688755 467789999999876
No 334
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.72 E-value=7.4e-18 Score=191.63 Aligned_cols=177 Identities=24% Similarity=0.281 Sum_probs=128.7
Q ss_pred CCEEEEEcCCCCCcccc--cccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCC-ccccccCCccE
Q 005001 83 SAVVSIDISGLGLSGTM--GYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLP-YSIASMVSLSY 157 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~--~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~ 157 (720)
.+++.|+|++|++++.. +..+..+++|++|+|++|.+++..+. +. ++|+.|+|++|.+++..| ..+.++++|++
T Consensus 347 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 425 (570)
T 2z63_A 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 425 (570)
T ss_dssp TTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCE
T ss_pred CCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCE
Confidence 45667777777776554 56677777777777777777743332 32 678888888888876655 46778888888
Q ss_pred EEccccccccccccccCCCCCCCeeecCCCccc-CCCCccccCCCCCCeeEeccccccccccc-cCC-CCcCeEEccCcc
Q 005001 158 LNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFS-GDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVANNH 234 (720)
Q Consensus 158 L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~l~l~~N~ 234 (720)
|+|++|.+++.+|..|..+++|++|+|++|+++ +.+|..+..+++|++|+|++|++++..+. +.. .+|+.|+|++|+
T Consensus 426 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 505 (570)
T 2z63_A 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQ 505 (570)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCc
Confidence 888888888777878888888888888888886 56777788888888888888888876543 322 458888888888
Q ss_pred CcccCcccc---cccceeeecCCcCCCCC
Q 005001 235 FSGWIPREL---ISIRTFIYDGNSFDNGP 260 (720)
Q Consensus 235 l~g~ip~~l---~~l~~l~l~~n~~~~~~ 260 (720)
|++..|..+ .+|+.+++.+|++.|..
T Consensus 506 l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 534 (570)
T 2z63_A 506 LKSVPDGIFDRLTSLQKIWLHTNPWDCSC 534 (570)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CCCCCHHHhhcccCCcEEEecCCcccCCC
Confidence 887666544 45677788888877653
No 335
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.72 E-value=1.8e-17 Score=186.35 Aligned_cols=172 Identities=22% Similarity=0.264 Sum_probs=144.2
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcC--CCCccccccCCccEEE
Q 005001 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSG--NLPYSIASMVSLSYLN 159 (720)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~ 159 (720)
+++.|++++|++.+.. .+..+++|++|+|++|++++.+|..+. ++|++|+|++|++++ .+|..++++++|++|+
T Consensus 303 ~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~ 380 (520)
T 2z7x_B 303 NIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLD 380 (520)
T ss_dssp CCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEE
T ss_pred ceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEE
Confidence 4666777777665432 127899999999999999998887775 899999999999997 6778899999999999
Q ss_pred cccccccccccc-ccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccc-cCCCCcCeEEccCccCcc
Q 005001 160 VSRNSLTQSIGD-IFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSGLPLTTLNVANNHFSG 237 (720)
Q Consensus 160 L~~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~L~~l~l~~N~l~g 237 (720)
|++|.+++.+|. .+..+++|++|+|++|++++.+|..+. ++|+.|+|++|+|+..++. +...+|+.|+|++|+|+
T Consensus 381 Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~L~~N~l~- 457 (520)
T 2z7x_B 381 ISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQLK- 457 (520)
T ss_dssp CCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCC-
T ss_pred CCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCcccccchhhhcCCCCCEEECCCCcCC-
Confidence 999999996665 488999999999999999988887775 7999999999999954443 34456999999999999
Q ss_pred cCccc-c---cccceeeecCCcCCCCC
Q 005001 238 WIPRE-L---ISIRTFIYDGNSFDNGP 260 (720)
Q Consensus 238 ~ip~~-l---~~l~~l~l~~n~~~~~~ 260 (720)
.+|.. + .+++.+++.+|++.|..
T Consensus 458 ~l~~~~~~~l~~L~~L~l~~N~~~c~c 484 (520)
T 2z7x_B 458 SVPDGIFDRLTSLQKIWLHTNPWDCSC 484 (520)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred ccCHHHhccCCcccEEECcCCCCcccC
Confidence 57764 4 57889999999998753
No 336
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=1.8e-17 Score=160.31 Aligned_cols=131 Identities=25% Similarity=0.322 Sum_probs=118.9
Q ss_pred CEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCc-cccccCCccEEEccccccccccccccCCCCCCCeeecCCCc
Q 005001 110 RKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPY-SIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNN 188 (720)
Q Consensus 110 ~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 188 (720)
++|++++|+++ .+|..+..+|++|+|++|+|++..+. .++++++|++|+|++|+|++..|..|..+++|++|+|++|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 89 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 89 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCC
T ss_pred CEEEcCCCCcC-cCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCc
Confidence 78999999996 89998889999999999999977664 48999999999999999999999999999999999999999
Q ss_pred ccCCCCccccCCCCCCeeEeccccccccccc-cCC-CCcCeEEccCccCcccCcc
Q 005001 189 FSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVANNHFSGWIPR 241 (720)
Q Consensus 189 l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~l~l~~N~l~g~ip~ 241 (720)
|++..|..|..+++|++|+|++|+|++.++. +.. .+|+.|+|++|.|++..+-
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 90 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp CCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred CCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 9988888899999999999999999998664 333 4599999999999987663
No 337
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.72 E-value=2.8e-17 Score=186.48 Aligned_cols=112 Identities=21% Similarity=0.233 Sum_probs=99.0
Q ss_pred cccCCccEEEccccccccccccccCCCCCCCeeecCCCcccC--CCCccccCCCCCCeeEeccccccccccc--cCC-CC
Q 005001 150 ASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSG--DLPNSFISLSNISSLYLQNNQVTGSLNV--FSG-LP 224 (720)
Q Consensus 150 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g--~~p~~~~~l~~L~~L~l~~N~l~~~~~~--~~~-~~ 224 (720)
..+++|++|+|++|++++.+|..++.+++|++|+|++|++++ .+|..+..+++|++|+|++|++++.++. +.. .+
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 678999999999999999999999999999999999999996 3457799999999999999999985543 333 45
Q ss_pred cCeEEccCccCcccCcccc-cccceeeecCCcCCCCCC
Q 005001 225 LTTLNVANNHFSGWIPREL-ISIRTFIYDGNSFDNGPA 261 (720)
Q Consensus 225 L~~l~l~~N~l~g~ip~~l-~~l~~l~l~~n~~~~~~~ 261 (720)
|+.|+|++|+|++.+|..+ .+|+.|++++|.+...|.
T Consensus 430 L~~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~~ip~ 467 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIMSIPK 467 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCCTTCSEEECCSSCCCCCCT
T ss_pred CCEEECCCCCCCcchhhhhcCcCCEEECCCCcCcccCh
Confidence 9999999999999999988 599999999999985543
No 338
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.71 E-value=3.7e-17 Score=167.75 Aligned_cols=161 Identities=20% Similarity=0.199 Sum_probs=136.5
Q ss_pred cccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEEccccccccccccccCC
Q 005001 98 TMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGN 175 (720)
Q Consensus 98 ~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 175 (720)
.+|..+. ++|++|+|++|++++..+..+. ++|++|+|++|++++..+..+.++++|++|+|++|++++..+..|..
T Consensus 21 ~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (276)
T 2z62_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 98 (276)
T ss_dssp SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT
T ss_pred ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcC
Confidence 3454443 5799999999999976665554 89999999999999877889999999999999999999998999999
Q ss_pred CCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccc-ccc-ccCC-CCcCeEEccCccCcccCccccc---ccc--
Q 005001 176 LAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTG-SLN-VFSG-LPLTTLNVANNHFSGWIPRELI---SIR-- 247 (720)
Q Consensus 176 l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-~~~-~~~~-~~L~~l~l~~N~l~g~ip~~l~---~l~-- 247 (720)
+++|++|+|++|++++..+..++.+++|++|+|++|+|++ .++ .+.. .+|+.|+|++|++++..+..+. +++
T Consensus 99 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l 178 (276)
T 2z62_A 99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLL 178 (276)
T ss_dssp CTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTC
T ss_pred CccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhcccc
Confidence 9999999999999998777789999999999999999987 334 3333 5699999999999987776664 444
Q ss_pred --eeeecCCcCCCCC
Q 005001 248 --TFIYDGNSFDNGP 260 (720)
Q Consensus 248 --~l~l~~n~~~~~~ 260 (720)
.+++.+|.+...+
T Consensus 179 ~l~L~ls~n~l~~~~ 193 (276)
T 2z62_A 179 NLSLDLSLNPMNFIQ 193 (276)
T ss_dssp CEEEECCSSCCCEEC
T ss_pred ceeeecCCCcccccC
Confidence 7889999987554
No 339
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.71 E-value=2.8e-17 Score=156.73 Aligned_cols=136 Identities=20% Similarity=0.272 Sum_probs=86.2
Q ss_pred CCCCCCCceeEecCCCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCC
Q 005001 69 DPCGESWKGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLP 146 (720)
Q Consensus 69 ~~c~~~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p 146 (720)
+.|.|+|++|.|+..+ ++. +|..+ .++|++|+|++|++++..+..+. ++|++|+|++|+|++..+
T Consensus 3 ~~C~C~~~~l~~~~~~----------l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 69 (177)
T 2o6r_A 3 SRCSCSGTEIRCNSKG----------LTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPD 69 (177)
T ss_dssp TTCEEETTEEECCSSC----------CSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCT
T ss_pred CCCEeCCCEEEecCCC----------Ccc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeCh
Confidence 4566688888887543 332 33222 25677777777777754443332 567777777777775555
Q ss_pred ccccccCCccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccc
Q 005001 147 YSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSL 217 (720)
Q Consensus 147 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~ 217 (720)
..+.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..+..+++|++|+|++|.+++..
T Consensus 70 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 70 GVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred hHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 55667777777777777777666666667777777777777776544444566666666666666666543
No 340
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.71 E-value=2.1e-17 Score=187.85 Aligned_cols=173 Identities=20% Similarity=0.201 Sum_probs=151.4
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEEc
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 160 (720)
.+++.|+|++|++++..+..|.++++|++|+|++|++++..|..+. ++|++|+|++|++++..|..|+++++|++|+|
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 3688999999999999899999999999999999999976666664 89999999999999888899999999999999
Q ss_pred cccccccccccccCCCCCCCeeecCCCcccC-CCCccccCCCCCCeeEecccccccccccc-CC-CCc----CeEEccCc
Q 005001 161 SRNSLTQSIGDIFGNLAGLATLDLSFNNFSG-DLPNSFISLSNISSLYLQNNQVTGSLNVF-SG-LPL----TTLNVANN 233 (720)
Q Consensus 161 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~-~~L----~~l~l~~N 233 (720)
++|++++..+..++++++|++|+|++|++++ .+|..|+++++|++|++++|++++..+.. .. .+| ..|++++|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 9999998777789999999999999999997 57999999999999999999999865432 11 234 78999999
Q ss_pred cCcccCccccc--ccceeeecCCc
Q 005001 234 HFSGWIPRELI--SIRTFIYDGNS 255 (720)
Q Consensus 234 ~l~g~ip~~l~--~l~~l~l~~n~ 255 (720)
.+++..|..+. +++.+++.+|.
T Consensus 188 ~l~~~~~~~~~~~~L~~L~l~~n~ 211 (570)
T 2z63_A 188 PMNFIQPGAFKEIRLHKLTLRNNF 211 (570)
T ss_dssp CCCEECTTTTTTCEEEEEEEESCC
T ss_pred CceecCHHHhccCcceeEeccccc
Confidence 99988887664 57788888874
No 341
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.70 E-value=3.7e-17 Score=173.92 Aligned_cols=192 Identities=20% Similarity=0.191 Sum_probs=154.2
Q ss_pred CCCCCCceeEecC-----------CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC---Cccc-ee
Q 005001 70 PCGESWKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP---PNLT-SL 134 (720)
Q Consensus 70 ~c~~~w~gv~c~~-----------~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~---~~L~-~L 134 (720)
.|.|+|..|.|++ ..++.|+|++|+|+...+..|.+|++|++|+|++|++.+.+|.... ++|. .+
T Consensus 6 ~C~C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l 85 (350)
T 4ay9_X 6 ICHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIR 85 (350)
T ss_dssp SSEEETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEE
T ss_pred ccEeeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhh
Confidence 3777899999974 2578899999999977777899999999999999999888886543 4444 57
Q ss_pred ccccccCcCCCCccccccCCccEEEccccccccccccccCCCCCCCeeecCC-CcccCCCCccccCCC-CCCeeEecccc
Q 005001 135 NLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSF-NNFSGDLPNSFISLS-NISSLYLQNNQ 212 (720)
Q Consensus 135 ~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~g~~p~~~~~l~-~L~~L~l~~N~ 212 (720)
.+++|+|++..|..|.++++|++|++++|+|++..+..+....++..|++.+ |++....+..|..+. .|+.|+|++|+
T Consensus 86 ~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~ 165 (350)
T 4ay9_X 86 IEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNG 165 (350)
T ss_dssp EEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSC
T ss_pred cccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccc
Confidence 7888999988889999999999999999999988877888888888999865 567754455666664 68899999999
Q ss_pred ccccccc-cCCCCcCeEEccCccCcccCcc----cccccceeeecCCcCCCCCC
Q 005001 213 VTGSLNV-FSGLPLTTLNVANNHFSGWIPR----ELISIRTFIYDGNSFDNGPA 261 (720)
Q Consensus 213 l~~~~~~-~~~~~L~~l~l~~N~l~g~ip~----~l~~l~~l~l~~n~~~~~~~ 261 (720)
|+...+. +...+|+.|++++|+.-+.||. .+.+|+.|++++|.+...|.
T Consensus 166 i~~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~ 219 (350)
T 4ay9_X 166 IQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPS 219 (350)
T ss_dssp CCEECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCS
T ss_pred ccCCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccCh
Confidence 9976543 4556699999986544446775 34678899999999886653
No 342
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.70 E-value=4.1e-17 Score=187.73 Aligned_cols=168 Identities=20% Similarity=0.179 Sum_probs=138.2
Q ss_pred EcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEEccccccc
Q 005001 89 DISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLT 166 (720)
Q Consensus 89 ~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 166 (720)
+-++.+|+ .+|..+. +++++|||++|+|++..|..+. ++|++|+|++|+|++..|..|.+|++|++|+|++|+|+
T Consensus 37 ~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~ 113 (635)
T 4g8a_A 37 QCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 113 (635)
T ss_dssp ECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred ECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCC
Confidence 44455565 4555443 4799999999999966666665 89999999999999877889999999999999999999
Q ss_pred cccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEecccccccc-ccc-cC-CCCcCeEEccCccCcccCcccc
Q 005001 167 QSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGS-LNV-FS-GLPLTTLNVANNHFSGWIPREL 243 (720)
Q Consensus 167 ~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~-~~~-~~-~~~L~~l~l~~N~l~g~ip~~l 243 (720)
+..+..|.++++|++|+|++|+|++..+..|+++++|++|+|++|+|++. ++. +. ...|+.|+|++|+|++..|..+
T Consensus 114 ~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l 193 (635)
T 4g8a_A 114 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL 193 (635)
T ss_dssp EECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGG
T ss_pred CCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccc
Confidence 88888999999999999999999977777899999999999999999873 443 33 3569999999999999888877
Q ss_pred cccc-------eeeecCCcCCCC
Q 005001 244 ISIR-------TFIYDGNSFDNG 259 (720)
Q Consensus 244 ~~l~-------~l~l~~n~~~~~ 259 (720)
..+. .+.+..|.+...
T Consensus 194 ~~L~~l~~~~~~~~ls~n~l~~i 216 (635)
T 4g8a_A 194 RVLHQMPLLNLSLDLSLNPMNFI 216 (635)
T ss_dssp HHHHTCTTCCCEEECTTCCCCEE
T ss_pred cchhhhhhhhhhhhcccCccccc
Confidence 5443 356667766543
No 343
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.70 E-value=6.6e-17 Score=179.01 Aligned_cols=166 Identities=25% Similarity=0.291 Sum_probs=80.8
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEccc
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 162 (720)
.+++.|++++|.+.+..+ ++.+++|++|+|++|.+++.-.....++|+.|+|++|.+++..| +..+++|++|+|++
T Consensus 199 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~ 274 (466)
T 1o6v_A 199 TNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGA 274 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCS
T ss_pred CCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccchhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCC
Confidence 355666666666655444 45555555555555555532111112455555555555554332 45555555555555
Q ss_pred cccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCCCCcCeEEccCccCcccCcc-
Q 005001 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPR- 241 (720)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~g~ip~- 241 (720)
|.+++..+ +..+++|+.|+|++|++++..| +..+++|+.|+|++|++++..+.....+|+.|++++|++++. +.
T Consensus 275 n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~-~~l 349 (466)
T 1o6v_A 275 NQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV-SSL 349 (466)
T ss_dssp SCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCCC-GGG
T ss_pred CccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCCc-hhh
Confidence 55554333 4455555555555555553322 445555555555555555544433333355555555554432 11
Q ss_pred -cccccceeeecCCcCC
Q 005001 242 -ELISIRTFIYDGNSFD 257 (720)
Q Consensus 242 -~l~~l~~l~l~~n~~~ 257 (720)
.+.+|+.|++.+|++.
T Consensus 350 ~~l~~L~~L~l~~n~l~ 366 (466)
T 1o6v_A 350 ANLTNINWLSAGHNQIS 366 (466)
T ss_dssp TTCTTCCEEECCSSCCC
T ss_pred ccCCCCCEEeCCCCccC
Confidence 2233444444444443
No 344
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.70 E-value=5.3e-17 Score=184.14 Aligned_cols=167 Identities=21% Similarity=0.249 Sum_probs=90.9
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEcccc
Q 005001 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRN 163 (720)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N 163 (720)
+++.|+|++|++... + .|..|++|+.|+|++|.|++..|..-.++|+.|+|++|+|++ +| .+..|++|+.|+|++|
T Consensus 44 ~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N 119 (605)
T 1m9s_A 44 SIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKPLTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHN 119 (605)
T ss_dssp TCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTS
T ss_pred CCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChhhccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCC
Confidence 455555555555432 2 355566666666666666554443333556666666666653 22 4556666666666666
Q ss_pred ccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCCCCcCeEEccCccCcccCcc--
Q 005001 164 SLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPR-- 241 (720)
Q Consensus 164 ~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~g~ip~-- 241 (720)
+|++. +.+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|+|++.++.....+|+.|+|++|+|++. |.
T Consensus 120 ~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i~~l-~~l~ 194 (605)
T 1m9s_A 120 GISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDL-RALA 194 (605)
T ss_dssp CCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBC-GGGT
T ss_pred CCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchhhccCCCCCEEECcCCCCCCC-hHHc
Confidence 66542 2355566666666666666543 34555666666666666666555533333466666666666542 32
Q ss_pred cccccceeeecCCcCCCC
Q 005001 242 ELISIRTFIYDGNSFDNG 259 (720)
Q Consensus 242 ~l~~l~~l~l~~n~~~~~ 259 (720)
.+.+|+.|++.+|++...
T Consensus 195 ~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 195 GLKNLDVLELFSQECLNK 212 (605)
T ss_dssp TCTTCSEEECCSEEEECC
T ss_pred cCCCCCEEEccCCcCcCC
Confidence 234555556666655543
No 345
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.69 E-value=5.7e-17 Score=157.43 Aligned_cols=153 Identities=14% Similarity=0.202 Sum_probs=127.3
Q ss_pred ccCCCCCCEEEccCCCCCCCCC-CCCCCccceeccccccCcCCCCccccccCCccEEEccccccccccccccCCCCCCCe
Q 005001 103 LSDLLSLRKFDLSGNSIHDTIP-YQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLAT 181 (720)
Q Consensus 103 l~~l~~L~~L~L~~N~l~~~~p-~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 181 (720)
.+.+++|++|+|++|.|+ .+| ....++|++|+|++|.++ .+..+.++++|++|+|++|++++..+..++.+++|++
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLTGIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCTTGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhhcCCccEEeccCCCcc-ChHHHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 467889999999999999 555 222389999999999776 3458999999999999999999989999999999999
Q ss_pred eecCCCcccCCCCccccCCCCCCeeEecccc-ccccccccCCCCcCeEEccCccCcccCc-ccccccceeeecCCcCCC
Q 005001 182 LDLSFNNFSGDLPNSFISLSNISSLYLQNNQ-VTGSLNVFSGLPLTTLNVANNHFSGWIP-RELISIRTFIYDGNSFDN 258 (720)
Q Consensus 182 L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~~L~~l~l~~N~l~g~ip-~~l~~l~~l~l~~n~~~~ 258 (720)
|+|++|++++..|..++.+++|++|+|++|+ ++...+.....+|+.|++++|++++..+ ..+.+|+.|++.+|++..
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~l~~l~~L~~L~l~~n~i~~~~~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGGGGGCSSCCEEECTTBCCCCCTTGGGCSSCCEEEECBC----
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccHhhcCCCCCCEEECCCCCCcChHHhccCCCCCEEEeeCcccCC
Confidence 9999999998889999999999999999998 5554333344569999999999997422 356789999999998753
No 346
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.69 E-value=2.8e-17 Score=171.71 Aligned_cols=176 Identities=20% Similarity=0.189 Sum_probs=147.7
Q ss_pred CCCEEEEEcCCCCCccccc----ccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCC--C--Cccccc
Q 005001 82 GSAVVSIDISGLGLSGTMG----YLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGN--L--PYSIAS 151 (720)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~----~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~--~--p~~~~~ 151 (720)
..+++.|+|++|.+++..+ ..+..+++|++|+|++|++++..|..+. ++|++|+|++|++.+. + +..+.+
T Consensus 116 ~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 195 (310)
T 4glp_A 116 GLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHK 195 (310)
T ss_dssp CBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTS
T ss_pred CCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhc
Confidence 4578999999999998665 4566899999999999999987777764 8999999999998753 2 233478
Q ss_pred cCCccEEEcccccccccc--cc-ccCCCCCCCeeecCCCcccCCCCccccCC---CCCCeeEeccccccccccccCCCCc
Q 005001 152 MVSLSYLNVSRNSLTQSI--GD-IFGNLAGLATLDLSFNNFSGDLPNSFISL---SNISSLYLQNNQVTGSLNVFSGLPL 225 (720)
Q Consensus 152 l~~L~~L~L~~N~l~~~~--p~-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l---~~L~~L~l~~N~l~~~~~~~~~~~L 225 (720)
+++|++|+|++|+|+... +. .++.+++|++|+|++|+|++.+|..++.+ ++|++|+|++|+|+. +|.....+|
T Consensus 196 l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~-lp~~~~~~L 274 (310)
T 4glp_A 196 FPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQ-VPKGLPAKL 274 (310)
T ss_dssp SCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCS-CCSCCCSCC
T ss_pred CCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCc-hhhhhcCCC
Confidence 999999999999997322 22 35788999999999999998889888877 699999999999995 444444679
Q ss_pred CeEEccCccCcc-cCcccccccceeeecCCcCCC
Q 005001 226 TTLNVANNHFSG-WIPRELISIRTFIYDGNSFDN 258 (720)
Q Consensus 226 ~~l~l~~N~l~g-~ip~~l~~l~~l~l~~n~~~~ 258 (720)
+.|+|++|+|++ .++..+.+|+.|++++|++..
T Consensus 275 ~~L~Ls~N~l~~~~~~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 275 RVLDLSSNRLNRAPQPDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp SCEECCSCCCCSCCCTTSCCCCSCEECSSTTTSC
T ss_pred CEEECCCCcCCCCchhhhCCCccEEECcCCCCCC
Confidence 999999999998 567788999999999999863
No 347
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.69 E-value=6.7e-17 Score=182.89 Aligned_cols=175 Identities=23% Similarity=0.288 Sum_probs=150.4
Q ss_pred eEecCCCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCc
Q 005001 78 VACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSL 155 (720)
Q Consensus 78 v~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L 155 (720)
..|....+ .++++++++. +|..+. ++|++|+|++|++++..|..+. ++|++|+|++|++++..|..|+++++|
T Consensus 2 ~~C~~~~~--c~~~~~~l~~-ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L 76 (549)
T 2z81_A 2 LSCDASGV--CDGRSRSFTS-IPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSL 76 (549)
T ss_dssp CEECTTSE--EECTTSCCSS-CCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred ccCCCCce--EECCCCcccc-ccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccC
Confidence 36877776 7999999984 555554 7999999999999988787665 899999999999999888999999999
Q ss_pred cEEEccccccccccccccCCCCCCCeeecCCCcccC-CCCccccCCCCCCeeEecccccccccc--ccCC-CCcCeEEcc
Q 005001 156 SYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSG-DLPNSFISLSNISSLYLQNNQVTGSLN--VFSG-LPLTTLNVA 231 (720)
Q Consensus 156 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~~-~~L~~l~l~ 231 (720)
++|+|++|++++..|..|+++++|++|+|++|++++ .+|..++++++|++|++++|++.+.++ .+.. .+|+.|+|+
T Consensus 77 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~ 156 (549)
T 2z81_A 77 EHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIK 156 (549)
T ss_dssp CEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEE
T ss_pred CEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeecc
Confidence 999999999999988889999999999999999996 467889999999999999999666554 3333 359999999
Q ss_pred CccCcccCccccc---ccceeeecCCcCC
Q 005001 232 NNHFSGWIPRELI---SIRTFIYDGNSFD 257 (720)
Q Consensus 232 ~N~l~g~ip~~l~---~l~~l~l~~n~~~ 257 (720)
+|++++.+|..+. +++.|++.+|.+.
T Consensus 157 ~n~l~~~~~~~l~~l~~L~~L~l~~n~~~ 185 (549)
T 2z81_A 157 ALSLRNYQSQSLKSIRDIHHLTLHLSESA 185 (549)
T ss_dssp ETTCCEECTTTTTTCSEEEEEEEECSBST
T ss_pred CCcccccChhhhhccccCceEecccCccc
Confidence 9999999998775 4667788888764
No 348
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.69 E-value=1.6e-16 Score=174.76 Aligned_cols=162 Identities=22% Similarity=0.320 Sum_probs=123.5
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEccc
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 162 (720)
.+++.|+|++|++++ +| .++++++|++|+|++|++++ +|... .+|++|+|++|++++ +| .++++++|++|++++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~-~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~ 204 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP-PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADN 204 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC-TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCS
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc-ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCC
Confidence 467778888888876 55 58888888888888888885 56443 588888888888886 56 588888888888888
Q ss_pred cccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCCCCcCeEEccCccCcccCccc
Q 005001 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPRE 242 (720)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~g~ip~~ 242 (720)
|++++ +|... ++|++|+|++|+++ .+|. ++.+++|++|++++|++++.... ..+|+.|++++|++++ +|..
T Consensus 205 N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~l~~~--~~~L~~L~l~~N~l~~-l~~~ 275 (454)
T 1jl5_A 205 NSLKK-LPDLP---LSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKTLPDL--PPSLEALNVRDNYLTD-LPEL 275 (454)
T ss_dssp SCCSS-CCCCC---TTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSSCCSC--CTTCCEEECCSSCCSC-CCCC
T ss_pred CcCCc-CCCCc---CcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCccccc--ccccCEEECCCCcccc-cCcc
Confidence 88886 44332 57888888888888 6774 88888888888888888874332 2468888888888885 7777
Q ss_pred ccccceeeecCCcCCCC
Q 005001 243 LISIRTFIYDGNSFDNG 259 (720)
Q Consensus 243 l~~l~~l~l~~n~~~~~ 259 (720)
+.+++.|++++|.+...
T Consensus 276 ~~~L~~L~ls~N~l~~l 292 (454)
T 1jl5_A 276 PQSLTFLDVSENIFSGL 292 (454)
T ss_dssp CTTCCEEECCSSCCSEE
T ss_pred cCcCCEEECcCCccCcc
Confidence 77888888888887753
No 349
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.68 E-value=1.3e-16 Score=164.99 Aligned_cols=149 Identities=23% Similarity=0.278 Sum_probs=129.3
Q ss_pred CCCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEcc
Q 005001 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (720)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~ 161 (720)
..+++.|+|++|++++..+ +.++++|++|+|++|.+++.-+..-.++|++|+|++|++++. +.+..+++|++|+|+
T Consensus 67 l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~ 142 (291)
T 1h6t_A 67 LPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLG 142 (291)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCGGGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECC
T ss_pred CCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCChhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEcc
Confidence 4589999999999998665 999999999999999999643333338999999999999963 578999999999999
Q ss_pred ccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCCCCcCeEEccCccCccc
Q 005001 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGW 238 (720)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~g~ 238 (720)
+|++++. ..++.+++|+.|+|++|++++..| +..+++|+.|+|++|+|++........+|+.|+|++|+++..
T Consensus 143 ~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l~~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 143 NNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp SSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBCGGGTTCTTCSEEEEEEEEEECC
T ss_pred CCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCChhhccCCCCCEEECcCCcccCC
Confidence 9999976 679999999999999999997555 999999999999999999865544445699999999999863
No 350
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.67 E-value=4.1e-16 Score=171.63 Aligned_cols=163 Identities=21% Similarity=0.244 Sum_probs=85.2
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEccc
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 162 (720)
.+++.|+|++|++++. | .++.+++|++|+|++|+|++ +|..-.++|++|+|++|+|++. | ++++++|++|+|++
T Consensus 42 ~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~ 115 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LDLSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDT 115 (457)
T ss_dssp TTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CCCTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCS
T ss_pred CCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-EccccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCC
Confidence 3455666666666553 2 45566666666666666654 3433335566666666666642 2 55566666666666
Q ss_pred cccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCCCCcCeEEccCccCcccCccc
Q 005001 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPRE 242 (720)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~g~ip~~ 242 (720)
|++++. | ++.+++|++|+|++|+|++ ++ ++.+++|++|++++|+..+.++.....+|+.|++++|+|++.-...
T Consensus 116 N~l~~l-~--~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~l~l~~ 189 (457)
T 3bz5_A 116 NKLTKL-D--VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITELDVSQ 189 (457)
T ss_dssp SCCSCC-C--CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCCCCTTCTTCCEEECCSSCCCCCCCTT
T ss_pred CcCCee-c--CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCcccccccccCCcCCEEECCCCccceecccc
Confidence 666552 2 5555666666666666654 22 4555555555555554444443333334555555555555421122
Q ss_pred ccccceeeecCCcCC
Q 005001 243 LISIRTFIYDGNSFD 257 (720)
Q Consensus 243 l~~l~~l~l~~n~~~ 257 (720)
+.+++.|.+.+|.+.
T Consensus 190 l~~L~~L~l~~N~l~ 204 (457)
T 3bz5_A 190 NKLLNRLNCDTNNIT 204 (457)
T ss_dssp CTTCCEEECCSSCCS
T ss_pred CCCCCEEECcCCcCC
Confidence 334444445444444
No 351
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.67 E-value=1e-16 Score=163.09 Aligned_cols=146 Identities=20% Similarity=0.237 Sum_probs=80.4
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEccc
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 162 (720)
.+++.|++++|+++. ++ .+..+++|++|+|++|+|++..|..-.++|++|+|++|++++ +|.... ++|+.|+|++
T Consensus 41 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~L~~N~l~~-l~~~~~--~~L~~L~L~~ 115 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKN-LNGIPS--ACLSRLFLDN 115 (263)
T ss_dssp TTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGGGTTCSSCCEEECCSSCCSC-CTTCCC--SSCCEEECCS
T ss_pred CcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChhhccCCCCCEEECCCCccCC-cCcccc--CcccEEEccC
Confidence 355566666666653 22 456666666666666666654442222566666666666663 333222 6666666666
Q ss_pred cccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCCCCcCeEEccCccCcc
Q 005001 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSG 237 (720)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~g 237 (720)
|+|++. +.+..+++|+.|+|++|+|++ ++ .+..+++|++|+|++|+|++........+|+.|+|++|.+++
T Consensus 116 N~l~~~--~~l~~l~~L~~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 116 NELRDT--DSLIHLKNLEILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp SCCSBS--GGGTTCTTCCEEECTTSCCCB-CG-GGGGCTTCCEEECTTSCCCBCTTSTTCCCCCEEEEEEEEEEC
T ss_pred CccCCC--hhhcCcccccEEECCCCcCCC-Ch-HHccCCCCCEEECCCCcCcchHHhccCCCCCEEeCCCCcccC
Confidence 666643 245566666666666666663 23 455666666666666666655222222336666666666654
No 352
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.67 E-value=5.4e-16 Score=170.70 Aligned_cols=164 Identities=20% Similarity=0.249 Sum_probs=138.1
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEccc
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 162 (720)
.+++.|+|++|++++. + ++++++|++|+|++|++++ +|..-.++|++|+|++|+|++ ++ ++++++|++|+|++
T Consensus 85 ~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~ 157 (457)
T 3bz5_A 85 TNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LDVSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHL 157 (457)
T ss_dssp TTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CCCTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTT
T ss_pred CCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ecCCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCC
Confidence 5789999999999985 3 8999999999999999997 565555899999999999997 43 88999999999999
Q ss_pred cccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCCCCcCeEEccCccCcccCc-c
Q 005001 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIP-R 241 (720)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~g~ip-~ 241 (720)
|+..+.+ .++.+++|+.|+|++|++++ +| ++.+++|+.|++++|+|++. +.....+|+.|+|++|+|++ +| .
T Consensus 158 n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~l~~l~~L~~L~Ls~N~l~~-ip~~ 230 (457)
T 3bz5_A 158 NKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL-DLNQNIQLTFLDCSSNKLTE-IDVT 230 (457)
T ss_dssp CSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC-CCTTCTTCSEEECCSSCCSC-CCCT
T ss_pred CCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee-ccccCCCCCEEECcCCcccc-cCcc
Confidence 9777666 48889999999999999996 55 88889999999999999885 43344569999999999997 55 3
Q ss_pred cccccceeeecCCcCCCCC
Q 005001 242 ELISIRTFIYDGNSFDNGP 260 (720)
Q Consensus 242 ~l~~l~~l~l~~n~~~~~~ 260 (720)
.+.+|+.|++.+|.+...+
T Consensus 231 ~l~~L~~L~l~~N~l~~~~ 249 (457)
T 3bz5_A 231 PLTQLTYFDCSVNPLTELD 249 (457)
T ss_dssp TCTTCSEEECCSSCCSCCC
T ss_pred ccCCCCEEEeeCCcCCCcC
Confidence 4567888999999888754
No 353
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.67 E-value=3.1e-16 Score=167.44 Aligned_cols=150 Identities=23% Similarity=0.241 Sum_probs=132.1
Q ss_pred CEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCcccc-ccCCccEEEccccccccccccccCCCCCCCeeecCCCc
Q 005001 110 RKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIA-SMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNN 188 (720)
Q Consensus 110 ~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 188 (720)
+.+++++|+++ .+|..+.+.++.|+|++|+|++..+..+. ++++|++|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 21 ~~l~c~~~~l~-~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~ 99 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNH 99 (361)
T ss_dssp TEEECCSSCCS-SCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CEEEeCCCCcC-ccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCc
Confidence 58999999999 68999989999999999999988888887 99999999999999999888999999999999999999
Q ss_pred ccCCCCccccCCCCCCeeEeccccccccccc-cCC-CCcCeEEccCccCcccCccc------ccccceeeecCCcCCCCC
Q 005001 189 FSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVANNHFSGWIPRE------LISIRTFIYDGNSFDNGP 260 (720)
Q Consensus 189 l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~l~l~~N~l~g~ip~~------l~~l~~l~l~~n~~~~~~ 260 (720)
|++..+..|..+++|++|+|++|+|++..+. +.. .+|+.|+|++|+|++..+.. +.+|+.|++.+|.+...+
T Consensus 100 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~ 179 (361)
T 2xot_A 100 LHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLP 179 (361)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCC
T ss_pred CCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccC
Confidence 9977777899999999999999999987653 433 45999999999999643333 468889999999987544
No 354
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.67 E-value=4.6e-16 Score=172.24 Aligned_cols=169 Identities=24% Similarity=0.348 Sum_probs=141.6
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEccc
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 162 (720)
.+++.|++++|.+++. +.+..+++|++|+|++|.+++..|....++|+.|+|++|++++ + ..+..+++|+.|+|++
T Consensus 177 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~ 252 (466)
T 1o6v_A 177 TTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLAN 252 (466)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCS
T ss_pred CCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCcccccccccccCCCCEEECCCCCccc-c-hhhhcCCCCCEEECCC
Confidence 4688899999988764 3488899999999999999987776666899999999999985 3 4688899999999999
Q ss_pred cccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCCCCcCeEEccCccCcccCc-c
Q 005001 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIP-R 241 (720)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~g~ip-~ 241 (720)
|.+++..+ +..+++|+.|+|++|++++..+ +..+++|+.|+|++|++++..+.....+|+.|+|++|++++..| .
T Consensus 253 n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 328 (466)
T 1o6v_A 253 NQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVS 328 (466)
T ss_dssp SCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCGGGG
T ss_pred Cccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCCchhhc
Confidence 99998765 8889999999999999996444 88899999999999999987775555679999999999998766 3
Q ss_pred cccccceeeecCCcCCCC
Q 005001 242 ELISIRTFIYDGNSFDNG 259 (720)
Q Consensus 242 ~l~~l~~l~l~~n~~~~~ 259 (720)
.+.+|+.|++.+|++...
T Consensus 329 ~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 329 SLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp GCTTCCEEECCSSCCCCC
T ss_pred cCccCCEeECCCCccCCc
Confidence 557888999999988764
No 355
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.67 E-value=4.6e-16 Score=176.43 Aligned_cols=157 Identities=22% Similarity=0.270 Sum_probs=133.3
Q ss_pred CCCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEcc
Q 005001 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (720)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~ 161 (720)
..+++.|+|++|+|++..+ +..|++|+.|+|++|.|++.-...-.++|+.|+|++|+|++ + +.+..|++|+.|+|+
T Consensus 64 l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls 139 (605)
T 1m9s_A 64 LPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDLSSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLG 139 (605)
T ss_dssp CTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCTTSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECC
T ss_pred CCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCChhhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECC
Confidence 4589999999999998766 99999999999999999964323333899999999999996 3 569999999999999
Q ss_pred ccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCCCCcCeEEccCccCcccCcc
Q 005001 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPR 241 (720)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~g~ip~ 241 (720)
+|+|++. ..++.+++|+.|+|++|+|++..| +..+++|+.|+|++|+|++........+|+.|+|++|++++....
T Consensus 140 ~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l~~l~~l~~L~~L~L~~N~l~~~p~~ 215 (605)
T 1m9s_A 140 NNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNKPIN 215 (605)
T ss_dssp SSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBCGGGTTCTTCSEEECCSEEEECCCCC
T ss_pred CCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCChHHccCCCCCEEEccCCcCcCCccc
Confidence 9999986 689999999999999999997666 999999999999999999864444445699999999999875333
Q ss_pred ccccc
Q 005001 242 ELISI 246 (720)
Q Consensus 242 ~l~~l 246 (720)
.+.++
T Consensus 216 ~~~~l 220 (605)
T 1m9s_A 216 HQSNL 220 (605)
T ss_dssp CCSSC
T ss_pred ccccE
Confidence 33333
No 356
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.66 E-value=1.7e-16 Score=153.37 Aligned_cols=113 Identities=26% Similarity=0.428 Sum_probs=57.4
Q ss_pred CCCCCCCccceeccccccCcCCCCccccccCCccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCC
Q 005001 123 IPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSN 202 (720)
Q Consensus 123 ~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~ 202 (720)
+|..+.++|++|+|++|+|+ .+|..+.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..|..|..+++
T Consensus 25 ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~ 103 (193)
T 2wfh_A 25 LPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKS 103 (193)
T ss_dssp CCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTT
T ss_pred CCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCC
Confidence 34333344445555555554 44455555555555555555555555555555555555555555555444445555555
Q ss_pred CCeeEeccccccccccc-cCC-CCcCeEEccCccCc
Q 005001 203 ISSLYLQNNQVTGSLNV-FSG-LPLTTLNVANNHFS 236 (720)
Q Consensus 203 L~~L~l~~N~l~~~~~~-~~~-~~L~~l~l~~N~l~ 236 (720)
|++|+|++|+|++..+. +.. .+|+.|+|++|.+.
T Consensus 104 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 104 LRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 55555555555543332 221 23555555555554
No 357
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.66 E-value=3.3e-16 Score=151.35 Aligned_cols=125 Identities=26% Similarity=0.282 Sum_probs=109.0
Q ss_pred EEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEEcccccc
Q 005001 88 IDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSL 165 (720)
Q Consensus 88 l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l 165 (720)
+++++++|+ .+|..+. ++|++|+|++|+|+ .+|..+. ++|+.|+|++|+|++..+..|.++++|++|+|++|+|
T Consensus 15 l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l 90 (193)
T 2wfh_A 15 VRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90 (193)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCcc
Confidence 455566666 4555443 58999999999998 7776665 8999999999999988888999999999999999999
Q ss_pred ccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEecccccccc
Q 005001 166 TQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGS 216 (720)
Q Consensus 166 ~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~ 216 (720)
++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|.+...
T Consensus 91 ~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 91 RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 999999999999999999999999966666789999999999999999763
No 358
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.66 E-value=5e-17 Score=178.85 Aligned_cols=161 Identities=22% Similarity=0.245 Sum_probs=101.7
Q ss_pred CEEEEEcCCCCCcccccccccCCCCC-------------CEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCcccc
Q 005001 84 AVVSIDISGLGLSGTMGYLLSDLLSL-------------RKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIA 150 (720)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~l~~l~~L-------------~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~ 150 (720)
+++.|++++|++.|.+|..++++++| ++|++++|.+++ +|. +.++|++|+|++|++++ +|..
T Consensus 35 ~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~-~~~~L~~L~l~~n~l~~-lp~~-- 109 (454)
T 1jl5_A 35 SKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPE-LPPHLESLVASCNSLTE-LPEL-- 109 (454)
T ss_dssp CHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCS-CCTTCSEEECCSSCCSS-CCCC--
T ss_pred chhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCC-CcCCCCEEEccCCcCCc-cccc--
Confidence 44555555566666666666655543 666666666653 332 33567777777777775 5543
Q ss_pred ccCCccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCCCCcCeEEc
Q 005001 151 SMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNV 230 (720)
Q Consensus 151 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l 230 (720)
+++|++|+|++|++++. |.. .++|++|+|++|++++ +| .++.+++|++|++++|+|++..... .+|+.|++
T Consensus 110 -~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~lp~~~--~~L~~L~L 180 (454)
T 1jl5_A 110 -PQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKKLPDLP--PSLEFIAA 180 (454)
T ss_dssp -CTTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSCCCCCC--TTCCEEEC
T ss_pred -cCCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcccCCCc--ccccEEEC
Confidence 35667777777766642 211 1578888888888875 66 5788888888888888887632221 36778888
Q ss_pred cCccCcccCcc--cccccceeeecCCcCCCC
Q 005001 231 ANNHFSGWIPR--ELISIRTFIYDGNSFDNG 259 (720)
Q Consensus 231 ~~N~l~g~ip~--~l~~l~~l~l~~n~~~~~ 259 (720)
++|++++ +|. .+.+|+.|++.+|.+...
T Consensus 181 ~~n~l~~-l~~~~~l~~L~~L~l~~N~l~~l 210 (454)
T 1jl5_A 181 GNNQLEE-LPELQNLPFLTAIYADNNSLKKL 210 (454)
T ss_dssp CSSCCSS-CCCCTTCTTCCEEECCSSCCSSC
T ss_pred cCCcCCc-CccccCCCCCCEEECCCCcCCcC
Confidence 8887776 553 234566777777777653
No 359
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.66 E-value=5.3e-16 Score=164.69 Aligned_cols=169 Identities=20% Similarity=0.261 Sum_probs=113.2
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEcccc
Q 005001 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRN 163 (720)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N 163 (720)
+++.|++++|.+.+..+ +..+++|++|++++|.+++..+....++|+.|++++|.+++..+ +..+++|++|+|++|
T Consensus 156 ~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n 231 (347)
T 4fmz_A 156 GLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNN 231 (347)
T ss_dssp TCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSS
T ss_pred CCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccccccccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCC
Confidence 45555555555544333 55666666666666666644332333566666666666664333 677778888888888
Q ss_pred ccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCCCCcCeEEccCccCcccCcccc
Q 005001 164 SLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPREL 243 (720)
Q Consensus 164 ~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~g~ip~~l 243 (720)
++++..+ +..+++|++|+|++|++++ + ..+..+++|++|++++|+|++........+|+.|+|++|++++..|..+
T Consensus 232 ~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l 307 (347)
T 4fmz_A 232 KITDLSP--LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDISVLNNLSQLNSLFLNNNQLGNEDMEVI 307 (347)
T ss_dssp CCCCCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCGGGHHHH
T ss_pred ccCCCcc--hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCChhhcCCCCCCEEECcCCcCCCcChhHh
Confidence 8876544 7778888888888888874 3 3577788888888888888775333333458888888888887777644
Q ss_pred ---cccceeeecCCcCCCCC
Q 005001 244 ---ISIRTFIYDGNSFDNGP 260 (720)
Q Consensus 244 ---~~l~~l~l~~n~~~~~~ 260 (720)
.+|+.|++.+|++...+
T Consensus 308 ~~l~~L~~L~L~~n~l~~~~ 327 (347)
T 4fmz_A 308 GGLTNLTTLFLSQNHITDIR 327 (347)
T ss_dssp HTCTTCSEEECCSSSCCCCG
T ss_pred hccccCCEEEccCCcccccc
Confidence 56777888888877553
No 360
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.65 E-value=1.8e-16 Score=149.57 Aligned_cols=131 Identities=21% Similarity=0.233 Sum_probs=87.5
Q ss_pred CCEEEEEcCCCCCc-ccccccccCCCCCCEEEccCCCCCCCCCCCC--CCccceeccccccCcCCCCccccccCCccEEE
Q 005001 83 SAVVSIDISGLGLS-GTMGYLLSDLLSLRKFDLSGNSIHDTIPYQL--PPNLTSLNLASNNFSGNLPYSIASMVSLSYLN 159 (720)
Q Consensus 83 ~~v~~l~l~~~~l~-g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~--~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 159 (720)
.+++.|+|++|+++ +.+|..+..+++|++|+|++|.|++. ..+ .++|++|+|++|++++.+|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 35677777777776 66777777777777777777777754 222 26677777777777766666666677777777
Q ss_pred cccccccccc-ccccCCCCCCCeeecCCCcccCCCC---ccccCCCCCCeeEeccccccc
Q 005001 160 VSRNSLTQSI-GDIFGNLAGLATLDLSFNNFSGDLP---NSFISLSNISSLYLQNNQVTG 215 (720)
Q Consensus 160 L~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~g~~p---~~~~~l~~L~~L~l~~N~l~~ 215 (720)
|++|+|++.. +..+..+++|++|+|++|.+++..+ ..+..+++|++|++++|.+..
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 7777776542 2566677777777777777764333 256666777777766666654
No 361
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.65 E-value=5.5e-16 Score=147.66 Aligned_cols=131 Identities=20% Similarity=0.261 Sum_probs=117.3
Q ss_pred CCEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEccccccccccccccCCCCCCCeeecCCCc
Q 005001 109 LRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNN 188 (720)
Q Consensus 109 L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 188 (720)
.+.+++++|+++ .+|..+.++|+.|+|++|++++..+..+.++++|++|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 87 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENK 87 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCEEEecCCCCc-cCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCC
Confidence 578999999998 6888888999999999999997777788999999999999999998888889999999999999999
Q ss_pred ccCCCCccccCCCCCCeeEecccccccccccc-C-CCCcCeEEccCccCcccCc
Q 005001 189 FSGDLPNSFISLSNISSLYLQNNQVTGSLNVF-S-GLPLTTLNVANNHFSGWIP 240 (720)
Q Consensus 189 l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~-~~~L~~l~l~~N~l~g~ip 240 (720)
|++..+..+..+++|++|+|++|+|++.++.. . ..+|+.|+|++|.+++..|
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 88 LQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 99777777899999999999999999876643 3 3469999999999998766
No 362
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.65 E-value=5.1e-16 Score=164.81 Aligned_cols=168 Identities=23% Similarity=0.319 Sum_probs=142.9
Q ss_pred CCCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEcc
Q 005001 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (720)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~ 161 (720)
..+++.|++++|.+.+..+ +..+++|++|++++|.+++..+....++|++|+|++|++++. +. +..+++|++|+|+
T Consensus 176 l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~~~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~ 251 (347)
T 4fmz_A 176 LTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITPVANMTRLNSLKIGNNKITDL-SP-LANLSQLTWLEIG 251 (347)
T ss_dssp CTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECC
T ss_pred CCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCchhhcCCcCCEEEccCCccCCC-cc-hhcCCCCCEEECC
Confidence 3579999999999987554 899999999999999999776655558999999999999954 44 9999999999999
Q ss_pred ccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccc-c-CCCCcCeEEccCccCcccC
Q 005001 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-F-SGLPLTTLNVANNHFSGWI 239 (720)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~-~~~~L~~l~l~~N~l~g~i 239 (720)
+|.+++. +.+..+++|++|+|++|++++ + ..+..+++|+.|+|++|++++..+. + ...+|+.|+|++|++++..
T Consensus 252 ~n~l~~~--~~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 327 (347)
T 4fmz_A 252 TNQISDI--NAVKDLTKLKMLNVGSNQISD-I-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIR 327 (347)
T ss_dssp SSCCCCC--GGGTTCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCG
T ss_pred CCccCCC--hhHhcCCCcCEEEccCCccCC-C-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCcccccc
Confidence 9999975 578999999999999999996 4 4588999999999999999986643 3 3456999999999999877
Q ss_pred c-ccccccceeeecCCcCC
Q 005001 240 P-RELISIRTFIYDGNSFD 257 (720)
Q Consensus 240 p-~~l~~l~~l~l~~n~~~ 257 (720)
| ..+.+|+.|++.+|++.
T Consensus 328 ~~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 328 PLASLSKMDSADFANQVIK 346 (347)
T ss_dssp GGGGCTTCSEESSSCC---
T ss_pred Chhhhhccceeehhhhccc
Confidence 7 46678999999999874
No 363
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.65 E-value=6.3e-18 Score=182.44 Aligned_cols=177 Identities=19% Similarity=0.240 Sum_probs=142.1
Q ss_pred CCCEEEEEcCCCCCcc----cccccccCCCCCCEEEccCCCCCCCCCCCCC---------------CccceeccccccCc
Q 005001 82 GSAVVSIDISGLGLSG----TMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP---------------PNLTSLNLASNNFS 142 (720)
Q Consensus 82 ~~~v~~l~l~~~~l~g----~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~---------------~~L~~L~L~~N~l~ 142 (720)
..+++.|+|++|.+++ .++..+..+++|++|+|++|.|++..+..+. ++|++|+|++|+++
T Consensus 93 ~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~ 172 (386)
T 2ca6_A 93 CPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLE 172 (386)
T ss_dssp CTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCT
T ss_pred CCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCC
Confidence 3578899999999988 5777888999999999999988744333332 58999999999997
Q ss_pred -CCCC---ccccccCCccEEEccccccc--c---ccccccCCCCCCCeeecCCCccc----CCCCccccCCCCCCeeEec
Q 005001 143 -GNLP---YSIASMVSLSYLNVSRNSLT--Q---SIGDIFGNLAGLATLDLSFNNFS----GDLPNSFISLSNISSLYLQ 209 (720)
Q Consensus 143 -g~~p---~~~~~l~~L~~L~L~~N~l~--~---~~p~~~~~l~~L~~L~l~~N~l~----g~~p~~~~~l~~L~~L~l~ 209 (720)
+.+| ..+..+++|+.|+|++|+|+ | .+|..+..+++|+.|+|++|+++ +.+|..+..+++|++|+|+
T Consensus 173 ~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~ 252 (386)
T 2ca6_A 173 NGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLN 252 (386)
T ss_dssp GGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECT
T ss_pred cHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECC
Confidence 4555 46778899999999999998 3 45558888999999999999996 5788888899999999999
Q ss_pred ccccccc----ccc-c---CCCCcCeEEccCccCcc----cCcccc----cccceeeecCCcCCC
Q 005001 210 NNQVTGS----LNV-F---SGLPLTTLNVANNHFSG----WIPREL----ISIRTFIYDGNSFDN 258 (720)
Q Consensus 210 ~N~l~~~----~~~-~---~~~~L~~l~l~~N~l~g----~ip~~l----~~l~~l~l~~n~~~~ 258 (720)
+|+|++. ++. + ...+|+.|+|++|.|++ .+|..+ .+|+.|++.+|++..
T Consensus 253 ~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~ 317 (386)
T 2ca6_A 253 DCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 317 (386)
T ss_dssp TCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred CCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCc
Confidence 9999875 222 2 24569999999999998 477654 678899999998863
No 364
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.65 E-value=3.1e-16 Score=178.11 Aligned_cols=176 Identities=22% Similarity=0.347 Sum_probs=120.1
Q ss_pred CCCCCCCCCCCCCCCCcee--------EecCCCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCCCcc
Q 005001 60 LTNWKGNEGDPCGESWKGV--------ACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNL 131 (720)
Q Consensus 60 l~~w~~~~~~~c~~~w~gv--------~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L 131 (720)
+..|... .++| .|+|. .|...+++.|++++|+|+ .+|..+. ++|++|+|++|+|+ .+|. ..++|
T Consensus 12 w~~W~~~-~~~~--~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~-~l~~L 83 (622)
T 3g06_A 12 WSAWRRA-APAE--ESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA-LPPEL 83 (622)
T ss_dssp HHHHHHT-CCGG--GHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC-CCTTC
T ss_pred HHHHHhc-CCcc--hhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC-cCCCC
Confidence 3456432 2344 68664 334457889999999998 6677665 78999999999998 5666 55889
Q ss_pred ceeccccccCcCCCCccccccCCccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccc
Q 005001 132 TSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNN 211 (720)
Q Consensus 132 ~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N 211 (720)
++|+|++|+|+ .+|. .+++|++|+|++|+|++. |. .+++|+.|+|++|+|++ +|.. +++|++|+|++|
T Consensus 84 ~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~l-~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N 151 (622)
T 3g06_A 84 RTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTHL-PA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDN 151 (622)
T ss_dssp CEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCCC-CC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSS
T ss_pred CEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCCC-CC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCC
Confidence 99999999988 5666 678899999999988864 33 56778888888888874 6653 377888888888
Q ss_pred cccccccccCCCCcCeEEccCccCcccCcccccccceeeecCCcCCC
Q 005001 212 QVTGSLNVFSGLPLTTLNVANNHFSGWIPRELISIRTFIYDGNSFDN 258 (720)
Q Consensus 212 ~l~~~~~~~~~~~L~~l~l~~N~l~g~ip~~l~~l~~l~l~~n~~~~ 258 (720)
+|++.... ..+|+.|++++|+|++ +|..+.+|+.|++++|.+..
T Consensus 152 ~l~~l~~~--~~~L~~L~L~~N~l~~-l~~~~~~L~~L~Ls~N~l~~ 195 (622)
T 3g06_A 152 QLASLPAL--PSELCKLWAYNNQLTS-LPMLPSGLQELSVSDNQLAS 195 (622)
T ss_dssp CCSCCCCC--CTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSC
T ss_pred cCCCcCCc--cCCCCEEECCCCCCCC-CcccCCCCcEEECCCCCCCC
Confidence 87764321 1235555555555553 44444455555555555443
No 365
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.64 E-value=3e-16 Score=148.12 Aligned_cols=134 Identities=22% Similarity=0.187 Sum_probs=107.5
Q ss_pred CCCCCCEEEccCCCCC-CCCCCCCC--CccceeccccccCcCCCCccccccCCccEEEccccccccccccccCCCCCCCe
Q 005001 105 DLLSLRKFDLSGNSIH-DTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLAT 181 (720)
Q Consensus 105 ~l~~L~~L~L~~N~l~-~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 181 (720)
..++|++|+|++|.++ +.+|..+. ++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3478899999999987 77887654 7899999999998865 78888999999999999998888888888899999
Q ss_pred eecCCCcccCCC-CccccCCCCCCeeEecccccccccc----ccCC-CCcCeEEccCccCcccCcc
Q 005001 182 LDLSFNNFSGDL-PNSFISLSNISSLYLQNNQVTGSLN----VFSG-LPLTTLNVANNHFSGWIPR 241 (720)
Q Consensus 182 L~l~~N~l~g~~-p~~~~~l~~L~~L~l~~N~l~~~~~----~~~~-~~L~~l~l~~N~l~g~ip~ 241 (720)
|+|++|++++.. +..+..+++|++|+|++|+|++..+ .+.. .+|+.|++++|.+. .+|.
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 999999988532 2678888899999999999888665 3433 45888888888887 4443
No 366
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.64 E-value=4.5e-17 Score=171.61 Aligned_cols=140 Identities=14% Similarity=0.131 Sum_probs=100.1
Q ss_pred CCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccC------------hHHHHH--------HHHHHHHhhcCCCCCc
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALS------------LQEEDN--------FLEAVSNMSRLRHPNI 470 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~------------~~~~~~--------~~~e~~~l~~l~h~ni 470 (720)
-|++...||+|+||.||+|...+|+.||||+++..... ...... ..+|...+.++.+.++
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 38999999999999999999999999999987532111 000111 1345555655544443
Q ss_pred cccceEEeecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCC
Q 005001 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD 550 (720)
Q Consensus 471 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~ 550 (720)
.-..-+.. ...++||||++|++|.++.. ......++.|++.+|.+||+. +||||||||.|||+++
T Consensus 176 ~vp~p~~~--~~~~LVME~i~G~~L~~l~~----------~~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~ 240 (397)
T 4gyi_A 176 PVPEPIAQ--SRHTIVMSLVDALPMRQVSS----------VPDPASLYADLIALILRLAKH---GLIHGDFNEFNILIRE 240 (397)
T ss_dssp SCCCEEEE--ETTEEEEECCSCEEGGGCCC----------CSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEE
T ss_pred CCCeeeec--cCceEEEEecCCccHhhhcc----------cHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeC
Confidence 22221211 22479999999988876542 113456889999999999998 9999999999999988
Q ss_pred CC----------ceEEcccCCCccC
Q 005001 551 EL----------NPHLSDCGLAALT 565 (720)
Q Consensus 551 ~~----------~~kl~Dfg~a~~~ 565 (720)
++ .+.|+||+-+...
T Consensus 241 dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 241 EKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp EECSSCTTSEEEEEEECCCTTCEET
T ss_pred CCCcccccccccceEEEEeCCcccC
Confidence 76 3899999977543
No 367
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.64 E-value=8.4e-16 Score=156.31 Aligned_cols=165 Identities=22% Similarity=0.284 Sum_probs=134.7
Q ss_pred EEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCC-CCCCCccceeccccccCcCCCCccccccCCccEEEcccc
Q 005001 85 VVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIP-YQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRN 163 (720)
Q Consensus 85 v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N 163 (720)
++.++++++++++.. .+..+++|++|+|++|.|+. +| ....++|++|+|++|+|++. |. +.++++|++|+|++|
T Consensus 21 l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~~l~~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L~~N 95 (263)
T 1xeu_A 21 AVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LAGMQFFTNLKELHLSHNQISDL-SP-LKDLTKLEELSVNRN 95 (263)
T ss_dssp HHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CTTGGGCTTCCEEECCSSCCCCC-GG-GTTCSSCCEEECCSS
T ss_pred HHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-chHHhhCCCCCEEECCCCccCCC-hh-hccCCCCCEEECCCC
Confidence 445667778887544 68899999999999999984 55 22238999999999999965 44 999999999999999
Q ss_pred ccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCCCCcCeEEccCccCcccCc--c
Q 005001 164 SLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIP--R 241 (720)
Q Consensus 164 ~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~g~ip--~ 241 (720)
++++. |.. .. ++|+.|+|++|++++ ++ .+..+++|+.|+|++|+|++........+|+.|+|++|+|++. + .
T Consensus 96 ~l~~l-~~~-~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~~~l~~l~~L~~L~L~~N~i~~~-~~l~ 169 (263)
T 1xeu_A 96 RLKNL-NGI-PS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGNEITNT-GGLT 169 (263)
T ss_dssp CCSCC-TTC-CC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBCGGGGGCTTCCEEECTTSCCCBC-TTST
T ss_pred ccCCc-Ccc-cc-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCChHHccCCCCCEEECCCCcCcch-HHhc
Confidence 99974 332 33 999999999999996 44 5999999999999999999875444556699999999999976 2 2
Q ss_pred cccccceeeecCCcCCCCC
Q 005001 242 ELISIRTFIYDGNSFDNGP 260 (720)
Q Consensus 242 ~l~~l~~l~l~~n~~~~~~ 260 (720)
.+.+|+.|++.+|++.+.+
T Consensus 170 ~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 170 RLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp TCCCCCEEEEEEEEEECCC
T ss_pred cCCCCCEEeCCCCcccCCc
Confidence 4567889999999998764
No 368
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=1.9e-16 Score=146.18 Aligned_cols=128 Identities=20% Similarity=0.186 Sum_probs=96.2
Q ss_pred CCEEEEEcCCCCCc-ccccccccCCCCCCEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEcc
Q 005001 83 SAVVSIDISGLGLS-GTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (720)
Q Consensus 83 ~~v~~l~l~~~~l~-g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~ 161 (720)
.+++.|++++|+++ +.+|..+..+++|++|+|++|.+++.....-.++|++|+|++|++++.+|..+.++++|++|+|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls 96 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSIANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLS 96 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCCTTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECT
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCchhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECC
Confidence 35778888888887 77888888888888888888888865111222678888888888887777777778888888888
Q ss_pred ccccccc-cccccCCCCCCCeeecCCCcccCCCC---ccccCCCCCCeeEecc
Q 005001 162 RNSLTQS-IGDIFGNLAGLATLDLSFNNFSGDLP---NSFISLSNISSLYLQN 210 (720)
Q Consensus 162 ~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~g~~p---~~~~~l~~L~~L~l~~ 210 (720)
+|++++. .+..++.+++|++|+|++|++++..+ ..+..+++|+.|++++
T Consensus 97 ~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 97 GNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp TSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 8888764 45777888888888888888875544 3677778888877653
No 369
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.62 E-value=1.7e-17 Score=186.96 Aligned_cols=169 Identities=17% Similarity=0.203 Sum_probs=92.0
Q ss_pred EEEEEcCCCCCcccccccccCCCCCCEEEccCCC-------------CCCCCCCCCC--Cccceec-cccccCcCCCCc-
Q 005001 85 VVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNS-------------IHDTIPYQLP--PNLTSLN-LASNNFSGNLPY- 147 (720)
Q Consensus 85 v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~-------------l~~~~p~~~~--~~L~~L~-L~~N~l~g~~p~- 147 (720)
+..|+|++|+|+ .+|..+++|++|+.|++++|. +.+.+|..+. ++|+.|+ ++.|.+. .++.
T Consensus 351 L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~-~L~~l 428 (567)
T 1dce_A 351 LFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD-DLRSK 428 (567)
T ss_dssp SSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-HHHHH
T ss_pred ceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-hhhhh
Confidence 445677777775 678888888888888887664 4444443322 3333333 2222221 0000
Q ss_pred -----cccc--cCCccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEecccccccccccc
Q 005001 148 -----SIAS--MVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVF 220 (720)
Q Consensus 148 -----~~~~--l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~ 220 (720)
.+.. ...|+.|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .+|..|+.+++|+.|+|++|+|++. |.+
T Consensus 429 ~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~l-p~l 504 (567)
T 1dce_A 429 FLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENV-DGV 504 (567)
T ss_dssp HHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCC-GGG
T ss_pred hhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCCC-ccc
Confidence 0000 0135556666666664 344 666666666666666666 5566666666666666666666653 232
Q ss_pred CC-CCcCeEEccCccCcccC-cccc---cccceeeecCCcCCCC
Q 005001 221 SG-LPLTTLNVANNHFSGWI-PREL---ISIRTFIYDGNSFDNG 259 (720)
Q Consensus 221 ~~-~~L~~l~l~~N~l~g~i-p~~l---~~l~~l~l~~n~~~~~ 259 (720)
.. .+|+.|+|++|+|++.+ |..+ .+|+.|++.+|++...
T Consensus 505 ~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~ 548 (567)
T 1dce_A 505 ANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 548 (567)
T ss_dssp TTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGS
T ss_pred CCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCC
Confidence 22 33666666666666554 5443 3445566666665544
No 370
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.60 E-value=7.9e-16 Score=142.07 Aligned_cols=111 Identities=18% Similarity=0.173 Sum_probs=69.9
Q ss_pred CCCCCEEEccCCCCC-CCCCCCCC--CccceeccccccCcCCCCccccccCCccEEEccccccccccccccCCCCCCCee
Q 005001 106 LLSLRKFDLSGNSIH-DTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATL 182 (720)
Q Consensus 106 l~~L~~L~L~~N~l~-~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 182 (720)
.++|+.|+|++|.++ +.+|..+. ++|++|+|++|++++. ..++++++|++|+|++|++++.+|..++.+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 356667777777766 56665443 5666666666666644 556666666666666666666666666666666666
Q ss_pred ecCCCcccCC-CCccccCCCCCCeeEecccccccccc
Q 005001 183 DLSFNNFSGD-LPNSFISLSNISSLYLQNNQVTGSLN 218 (720)
Q Consensus 183 ~l~~N~l~g~-~p~~~~~l~~L~~L~l~~N~l~~~~~ 218 (720)
+|++|++++. .|..+..+++|++|++++|+|++..+
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 6666666642 23556666666666666666665443
No 371
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.59 E-value=7.8e-15 Score=166.57 Aligned_cols=38 Identities=21% Similarity=0.364 Sum_probs=29.2
Q ss_pred CCcCeEEccCccCcccCcccccccceeeecCCcCCCCCC
Q 005001 223 LPLTTLNVANNHFSGWIPRELISIRTFIYDGNSFDNGPA 261 (720)
Q Consensus 223 ~~L~~l~l~~N~l~g~ip~~l~~l~~l~l~~n~~~~~~~ 261 (720)
.+|+.|+|++|+|++ +|..+.+|+.|++++|.+...|.
T Consensus 221 ~~L~~L~Ls~N~L~~-lp~~l~~L~~L~Ls~N~L~~lp~ 258 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LPVLPSELKELMVSGNRLTSLPM 258 (622)
T ss_dssp TTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSCCCC
T ss_pred CCCCEEEccCCccCc-CCCCCCcCcEEECCCCCCCcCCc
Confidence 348888888888885 77777888888888888875443
No 372
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.59 E-value=4.5e-15 Score=140.27 Aligned_cols=107 Identities=24% Similarity=0.356 Sum_probs=88.9
Q ss_pred CEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEccccccccccccccCCCCCCCeeecCCCcc
Q 005001 110 RKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNF 189 (720)
Q Consensus 110 ~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 189 (720)
+.|++++|.++ .+|..+.++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l 90 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL 90 (170)
T ss_dssp TEEECTTSCCS-SCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CEEEeCCCCcC-ccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCcc
Confidence 35556666666 46766777888888888888888888899999999999999999988888889999999999999999
Q ss_pred cCCCCccccCCCCCCeeEeccccccccc
Q 005001 190 SGDLPNSFISLSNISSLYLQNNQVTGSL 217 (720)
Q Consensus 190 ~g~~p~~~~~l~~L~~L~l~~N~l~~~~ 217 (720)
++..+..|..+++|++|+|++|.++...
T Consensus 91 ~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 91 KSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 9766667889999999999998887643
No 373
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.59 E-value=2e-16 Score=183.88 Aligned_cols=154 Identities=23% Similarity=0.168 Sum_probs=121.7
Q ss_pred EEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEEcccccc
Q 005001 88 IDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSL 165 (720)
Q Consensus 88 l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l 165 (720)
+++..|.+. ..+..+..++.|+.|+|++|.|. .+|..+. ++|++|+|++|.|+ .+|..|++|++|++|+|++|+|
T Consensus 206 ~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l 282 (727)
T 4b8c_D 206 DDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRL 282 (727)
T ss_dssp -----------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCC
T ss_pred cccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcC
Confidence 333334443 45778999999999999999999 7776665 89999999999999 8999999999999999999999
Q ss_pred ccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCC-C--CcCeEEccCccCcccCccc
Q 005001 166 TQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSG-L--PLTTLNVANNHFSGWIPRE 242 (720)
Q Consensus 166 ~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~--~L~~l~l~~N~l~g~ip~~ 242 (720)
+ .+|..|+.|++|++|+|++|+|+ .+|..|+.|++|++|+|++|+|++.+|.... . .+..|+|++|.++|.+|..
T Consensus 283 ~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~ 360 (727)
T 4b8c_D 283 T-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE 360 (727)
T ss_dssp S-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_pred C-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc
Confidence 9 78999999999999999999998 8899999999999999999999997765432 2 2345789999999999987
Q ss_pred cccc
Q 005001 243 LISI 246 (720)
Q Consensus 243 l~~l 246 (720)
+..+
T Consensus 361 l~~l 364 (727)
T 4b8c_D 361 RRFI 364 (727)
T ss_dssp ----
T ss_pred ccee
Confidence 7654
No 374
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.58 E-value=1.7e-16 Score=169.51 Aligned_cols=176 Identities=21% Similarity=0.258 Sum_probs=119.8
Q ss_pred CCEEEEEcCCCCCccccc----ccccCCC-CCCEEEccCCCCCCCCCCCCC-------CccceeccccccCcCCCCcccc
Q 005001 83 SAVVSIDISGLGLSGTMG----YLLSDLL-SLRKFDLSGNSIHDTIPYQLP-------PNLTSLNLASNNFSGNLPYSIA 150 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~----~~l~~l~-~L~~L~L~~N~l~~~~p~~~~-------~~L~~L~L~~N~l~g~~p~~~~ 150 (720)
.+++.|+|++|++++..+ ..+..++ +|++|+|++|.|++..+..+. ++|++|+|++|++++..+..+.
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 357888888888877666 6677777 788888888888765553331 5788888888888876666544
Q ss_pred cc-----CCccEEEcccccccccccccc----CC-CCCCCeeecCCCcccCCCCc----cccCCC-CCCeeEeccccccc
Q 005001 151 SM-----VSLSYLNVSRNSLTQSIGDIF----GN-LAGLATLDLSFNNFSGDLPN----SFISLS-NISSLYLQNNQVTG 215 (720)
Q Consensus 151 ~l-----~~L~~L~L~~N~l~~~~p~~~----~~-l~~L~~L~l~~N~l~g~~p~----~~~~l~-~L~~L~l~~N~l~~ 215 (720)
.. ++|++|+|++|+|++..+..+ .. .++|++|+|++|++++..+. .+..++ +|++|+|++|+|++
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~ 181 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLAS 181 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCch
Confidence 43 788888888888877665543 33 25788888888888753333 334444 78888888888876
Q ss_pred ccc-----ccCC--CCcCeEEccCccCccc----Ccccc----cccceeeecCCcCCC
Q 005001 216 SLN-----VFSG--LPLTTLNVANNHFSGW----IPREL----ISIRTFIYDGNSFDN 258 (720)
Q Consensus 216 ~~~-----~~~~--~~L~~l~l~~N~l~g~----ip~~l----~~l~~l~l~~n~~~~ 258 (720)
..+ .+.. .+|+.|+|++|.|++. ++..+ .+|+.|++++|.+..
T Consensus 182 ~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 239 (362)
T 3goz_A 182 KNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHG 239 (362)
T ss_dssp SCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCC
T ss_pred hhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCc
Confidence 543 1111 3588888888888763 44433 367788888887654
No 375
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.58 E-value=7.3e-17 Score=170.52 Aligned_cols=139 Identities=19% Similarity=0.237 Sum_probs=63.0
Q ss_pred CCceeEecCCCEEEEEcCCCCCcccccccccCC--CCCCEEEccCCCCCCCCCCCCC-CccceeccccccCcCC-CCccc
Q 005001 74 SWKGVACEGSAVVSIDISGLGLSGTMGYLLSDL--LSLRKFDLSGNSIHDTIPYQLP-PNLTSLNLASNNFSGN-LPYSI 149 (720)
Q Consensus 74 ~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l--~~L~~L~L~~N~l~~~~p~~~~-~~L~~L~L~~N~l~g~-~p~~~ 149 (720)
.|.++.|+...++.|+++++++. +..+..+ ++|+.|++++|.+++..+..+. ++|++|+|++|.+++. +|..+
T Consensus 38 ~W~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~ 114 (336)
T 2ast_B 38 RWYRLASDESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGIL 114 (336)
T ss_dssp HHHHHHTCSTTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHH
T ss_pred HHHHHhcCchhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHH
Confidence 35555444434444555544443 2333333 4444455555444443333221 4444455554444433 44444
Q ss_pred cccCCccEEEccccccccccccccCCCCCCCeeecCCC-cccC-CCCccccCCCCCCeeEeccc-cccc
Q 005001 150 ASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFN-NFSG-DLPNSFISLSNISSLYLQNN-QVTG 215 (720)
Q Consensus 150 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N-~l~g-~~p~~~~~l~~L~~L~l~~N-~l~~ 215 (720)
.++++|++|+|++|.+++..+..++.+++|++|+|++| .+++ .++..+..+++|++|+|++| ++++
T Consensus 115 ~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~ 183 (336)
T 2ast_B 115 SQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTE 183 (336)
T ss_dssp TTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCH
T ss_pred hhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcCh
Confidence 44445555555544444444444444444555555444 3443 13333444444444444444 4443
No 376
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.57 E-value=2.3e-16 Score=170.12 Aligned_cols=174 Identities=20% Similarity=0.218 Sum_probs=92.3
Q ss_pred CEEEEEcCCC---CCcccccccc-------cCCCCCCEEEccCCCCCC----CCCCCCC--CccceeccccccCcCCCCc
Q 005001 84 AVVSIDISGL---GLSGTMGYLL-------SDLLSLRKFDLSGNSIHD----TIPYQLP--PNLTSLNLASNNFSGNLPY 147 (720)
Q Consensus 84 ~v~~l~l~~~---~l~g~~~~~l-------~~l~~L~~L~L~~N~l~~----~~p~~~~--~~L~~L~L~~N~l~g~~p~ 147 (720)
+++.|+|++| ++.+.+|..+ ..+++|++|+|++|.|++ .+|..+. ++|++|+|++|.|++..+.
T Consensus 61 ~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~ 140 (386)
T 2ca6_A 61 DLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGA 140 (386)
T ss_dssp TCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHH
T ss_pred CccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHH
Confidence 4556666653 3444444433 456666666666666654 2332222 5666666666666533222
Q ss_pred c----cccc---------CCccEEEccccccc-cccc---cccCCCCCCCeeecCCCccc--C---CCCccccCCCCCCe
Q 005001 148 S----IASM---------VSLSYLNVSRNSLT-QSIG---DIFGNLAGLATLDLSFNNFS--G---DLPNSFISLSNISS 205 (720)
Q Consensus 148 ~----~~~l---------~~L~~L~L~~N~l~-~~~p---~~~~~l~~L~~L~l~~N~l~--g---~~p~~~~~l~~L~~ 205 (720)
. +..+ ++|++|+|++|+|+ +.++ ..+..+++|+.|+|++|+++ | .+|..+..+++|+.
T Consensus 141 ~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~ 220 (386)
T 2ca6_A 141 KIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKV 220 (386)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCE
T ss_pred HHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccE
Confidence 2 2223 56666666666665 3333 34555666666666666665 2 23335556666666
Q ss_pred eEecccccc----ccccc-c-CCCCcCeEEccCccCccc----Cccc-----ccccceeeecCCcCC
Q 005001 206 LYLQNNQVT----GSLNV-F-SGLPLTTLNVANNHFSGW----IPRE-----LISIRTFIYDGNSFD 257 (720)
Q Consensus 206 L~l~~N~l~----~~~~~-~-~~~~L~~l~l~~N~l~g~----ip~~-----l~~l~~l~l~~n~~~ 257 (720)
|+|++|+|+ +.++. + ...+|+.|+|++|.|++. +|.. +.+|+.|++.+|.+.
T Consensus 221 L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~ 287 (386)
T 2ca6_A 221 LDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIE 287 (386)
T ss_dssp EECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCB
T ss_pred EECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCC
Confidence 666666664 22221 1 223466666666666554 3433 345666666666554
No 377
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.57 E-value=9.3e-15 Score=138.56 Aligned_cols=107 Identities=23% Similarity=0.317 Sum_probs=88.7
Q ss_pred CEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEccccccccccccccCCCCCCCeeecCCCcc
Q 005001 110 RKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNF 189 (720)
Q Consensus 110 ~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 189 (720)
+.+++++|+++ .+|..+.++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l 93 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHL 93 (174)
T ss_dssp SEEECCSSCCS-SCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred cEEEeCCCCCC-ccCCCcCCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCcc
Confidence 45667777775 67777778888888888888888888899999999999999999987777788999999999999999
Q ss_pred cCCCCccccCCCCCCeeEeccccccccc
Q 005001 190 SGDLPNSFISLSNISSLYLQNNQVTGSL 217 (720)
Q Consensus 190 ~g~~p~~~~~l~~L~~L~l~~N~l~~~~ 217 (720)
++..+..|..+++|++|+|++|.|....
T Consensus 94 ~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 94 KSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred ceeCHHHhccccCCCEEEeCCCCccccc
Confidence 9655556888999999999999887643
No 378
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.56 E-value=6.2e-16 Score=165.23 Aligned_cols=172 Identities=22% Similarity=0.254 Sum_probs=140.6
Q ss_pred EEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCC----CCCC--C-ccceeccccccCcCCCCcccccc-----CC
Q 005001 87 SIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIP----YQLP--P-NLTSLNLASNNFSGNLPYSIASM-----VS 154 (720)
Q Consensus 87 ~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p----~~~~--~-~L~~L~L~~N~l~g~~p~~~~~l-----~~ 154 (720)
..+|+.|+++|.+|..+...++|++|||++|.|++..+ ..+. + +|++|+|++|+|++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46789999999999999988899999999999996655 2222 4 89999999999998888888876 99
Q ss_pred ccEEEccccccccccccccCC----C-CCCCeeecCCCcccCCCCcccc----C-CCCCCeeEeccccccccc----c-c
Q 005001 155 LSYLNVSRNSLTQSIGDIFGN----L-AGLATLDLSFNNFSGDLPNSFI----S-LSNISSLYLQNNQVTGSL----N-V 219 (720)
Q Consensus 155 L~~L~L~~N~l~~~~p~~~~~----l-~~L~~L~l~~N~l~g~~p~~~~----~-l~~L~~L~l~~N~l~~~~----~-~ 219 (720)
|++|+|++|++++..+..++. + ++|++|+|++|+|++..+..++ . .++|++|+|++|+|++.. + .
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 999999999999887775444 4 8999999999999976665544 3 369999999999999632 1 1
Q ss_pred cC-C-CCcCeEEccCccCcccCcccc--------cccceeeecCCcCCC
Q 005001 220 FS-G-LPLTTLNVANNHFSGWIPREL--------ISIRTFIYDGNSFDN 258 (720)
Q Consensus 220 ~~-~-~~L~~l~l~~N~l~g~ip~~l--------~~l~~l~l~~n~~~~ 258 (720)
+. . .+|+.|+|++|+|++..+..+ .+|+.|++++|.+..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~ 210 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGL 210 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCCh
Confidence 11 2 369999999999998777533 378999999998763
No 379
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.54 E-value=1e-15 Score=161.63 Aligned_cols=172 Identities=23% Similarity=0.249 Sum_probs=130.6
Q ss_pred CCEEEEEcCCCCCccc-ccccccCCCCCCEEEccCCCCCCCCCCCCC--Cccceeccccc-cCcC-CCCccccccCCccE
Q 005001 83 SAVVSIDISGLGLSGT-MGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASN-NFSG-NLPYSIASMVSLSY 157 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~-~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N-~l~g-~~p~~~~~l~~L~~ 157 (720)
.+++.|+|++|.+++. ++..+..+++|++|+|++|.+++..|..+. ++|++|+|++| .+++ .++..+.++++|++
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~ 172 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 172 (336)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCE
Confidence 4788899999998876 788888999999999999988876665544 78999999998 6775 36777888899999
Q ss_pred EEcccc-ccccc-cccccCCCC-CCCeeecCCC--ccc-CCCCccccCCCCCCeeEecccc-ccccc-ccc-CCCCcCeE
Q 005001 158 LNVSRN-SLTQS-IGDIFGNLA-GLATLDLSFN--NFS-GDLPNSFISLSNISSLYLQNNQ-VTGSL-NVF-SGLPLTTL 228 (720)
Q Consensus 158 L~L~~N-~l~~~-~p~~~~~l~-~L~~L~l~~N--~l~-g~~p~~~~~l~~L~~L~l~~N~-l~~~~-~~~-~~~~L~~l 228 (720)
|+|++| .+++. ++..+..++ +|++|+|++| .++ +.+|..+..+++|++|+|++|. +++.. +.+ ...+|+.|
T Consensus 173 L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L 252 (336)
T 2ast_B 173 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHL 252 (336)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEE
T ss_pred EcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEe
Confidence 999999 88865 577788888 8999999888 455 4567777788889999999888 66533 333 23458888
Q ss_pred EccCcc-CcccCc---ccccccceeeecCC
Q 005001 229 NVANNH-FSGWIP---RELISIRTFIYDGN 254 (720)
Q Consensus 229 ~l~~N~-l~g~ip---~~l~~l~~l~l~~n 254 (720)
+|++|. +..... ..+.+|+.|++.+|
T Consensus 253 ~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 253 SLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp ECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred eCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 888885 332211 13456778888877
No 380
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.53 E-value=6.4e-15 Score=140.11 Aligned_cols=130 Identities=18% Similarity=0.218 Sum_probs=74.5
Q ss_pred ccCCCCCCEEEccCCCCCCCCCCCC--CCccceeccccccCcCCCCccccccCCccEEEccccccccccccccCCCCCCC
Q 005001 103 LSDLLSLRKFDLSGNSIHDTIPYQL--PPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLA 180 (720)
Q Consensus 103 l~~l~~L~~L~L~~N~l~~~~p~~~--~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 180 (720)
+.++++|++|+|++|+++. +|.-. .++|++|+|++|+|++. ..+.++++|++|+|++|+|++..+..+..+++|+
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred cCCcCCceEEEeeCCCCch-hHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 4455666666666666662 33211 13666666666666643 4566666666666666666654444446666666
Q ss_pred eeecCCCcccCCCCc--cccCCCCCCeeEeccccccccccc----c-CCCCcCeEEccCccCc
Q 005001 181 TLDLSFNNFSGDLPN--SFISLSNISSLYLQNNQVTGSLNV----F-SGLPLTTLNVANNHFS 236 (720)
Q Consensus 181 ~L~l~~N~l~g~~p~--~~~~l~~L~~L~l~~N~l~~~~~~----~-~~~~L~~l~l~~N~l~ 236 (720)
+|+|++|+|+ .+|. .+..+++|+.|+|++|.|+...+. + ...+|+.|++++|.+.
T Consensus 92 ~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 92 ELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 6666666664 4554 566666666666666666543331 2 2234666666666554
No 381
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.52 E-value=9.4e-17 Score=156.05 Aligned_cols=130 Identities=25% Similarity=0.290 Sum_probs=91.8
Q ss_pred CEEEEEcCCCCCcccccc------cccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCc
Q 005001 84 AVVSIDISGLGLSGTMGY------LLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSL 155 (720)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~------~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L 155 (720)
.++.++++.+++.|.+|. .++.+++|++|+|++|.|++ +| .+. ++|++|+|++|+|+ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 345555666666666665 77888888888888888875 55 443 67888888888877 577777777788
Q ss_pred cEEEccccccccccccccCCCCCCCeeecCCCcccCCCC-ccccCCCCCCeeEecccccccccc
Q 005001 156 SYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLP-NSFISLSNISSLYLQNNQVTGSLN 218 (720)
Q Consensus 156 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~~~~~ 218 (720)
++|+|++|+|++ +| .++.+++|++|+|++|++++..+ ..+..+++|++|++++|.+++.++
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccc
Confidence 888888888776 34 57777777888888877774222 356777777777777777776543
No 382
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.51 E-value=1.9e-14 Score=136.85 Aligned_cols=129 Identities=19% Similarity=0.220 Sum_probs=108.7
Q ss_pred CCEEEEEcCCCCCcccccccccCCC-CCCEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCccccccCCccEEEcc
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLL-SLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~ 161 (720)
.+++.|+|++|+++.. +. +..+. +|++|+|++|.|++.-...-.++|++|+|++|+|++..+..+..+++|++|+|+
T Consensus 19 ~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 96 (176)
T 1a9n_A 19 VRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILT 96 (176)
T ss_dssp TSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEECCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECC
T ss_pred CCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcccccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECC
Confidence 4789999999999954 44 55555 999999999999975222223899999999999996555556999999999999
Q ss_pred cccccccccc--ccCCCCCCCeeecCCCcccCCCCcc----ccCCCCCCeeEeccccccc
Q 005001 162 RNSLTQSIGD--IFGNLAGLATLDLSFNNFSGDLPNS----FISLSNISSLYLQNNQVTG 215 (720)
Q Consensus 162 ~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~g~~p~~----~~~l~~L~~L~l~~N~l~~ 215 (720)
+|+|+ .+|. .+..+++|+.|+|++|.++ .+|.. +..+++|+.|++++|.+..
T Consensus 97 ~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 97 NNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp SCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 99996 4565 8999999999999999998 67774 8899999999999999865
No 383
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.48 E-value=1e-13 Score=156.27 Aligned_cols=161 Identities=17% Similarity=0.207 Sum_probs=129.5
Q ss_pred CEEEEEcCCCC-------------CcccccccccCCCCCCEEE-ccCCCCCCCCCC---------CC-CCccceeccccc
Q 005001 84 AVVSIDISGLG-------------LSGTMGYLLSDLLSLRKFD-LSGNSIHDTIPY---------QL-PPNLTSLNLASN 139 (720)
Q Consensus 84 ~v~~l~l~~~~-------------l~g~~~~~l~~l~~L~~L~-L~~N~l~~~~p~---------~~-~~~L~~L~L~~N 139 (720)
+++.|++++|. +.+.+|..+++|++|+.|+ ++.|.+. .++. .+ ...|+.|+|++|
T Consensus 373 ~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~-~L~~l~l~~n~i~~l~~~~L~~L~Ls~n 451 (567)
T 1dce_A 373 ELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD-DLRSKFLLENSVLKMEYADVRVLHLAHK 451 (567)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-HHHHHHHHHHHHHHHHHTTCSEEECTTS
T ss_pred HHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-hhhhhhhhcccccccCccCceEEEecCC
Confidence 35667776664 6788888999999999998 6666433 1110 00 136999999999
Q ss_pred cCcCCCCccccccCCccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccc--
Q 005001 140 NFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSL-- 217 (720)
Q Consensus 140 ~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~-- 217 (720)
+|++ +|. ++++++|+.|+|++|+|+ .+|..|+.+++|+.|+|++|+|++ +| .++.+++|++|+|++|+|++.+
T Consensus 452 ~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p 526 (567)
T 1dce_A 452 DLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAI 526 (567)
T ss_dssp CCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTT
T ss_pred CCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCc
Confidence 9996 776 999999999999999999 789999999999999999999996 77 8999999999999999999974
Q ss_pred cccCC-CCcCeEEccCccCcccCccc------ccccceee
Q 005001 218 NVFSG-LPLTTLNVANNHFSGWIPRE------LISIRTFI 250 (720)
Q Consensus 218 ~~~~~-~~L~~l~l~~N~l~g~ip~~------l~~l~~l~ 250 (720)
..+.. .+|+.|+|++|+|++.+|.. +.+|+.|+
T Consensus 527 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~ 566 (567)
T 1dce_A 527 QPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSIL 566 (567)
T ss_dssp GGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEE
T ss_pred HHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccC
Confidence 44443 45999999999999876632 45666654
No 384
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.47 E-value=3.6e-16 Score=151.85 Aligned_cols=134 Identities=24% Similarity=0.302 Sum_probs=115.8
Q ss_pred ccCCCCCCEEEccCCCCCCCCCC------CCC--CccceeccccccCcCCCCccccccCCccEEEccccccccccccccC
Q 005001 103 LSDLLSLRKFDLSGNSIHDTIPY------QLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFG 174 (720)
Q Consensus 103 l~~l~~L~~L~L~~N~l~~~~p~------~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 174 (720)
+.....++.++|+.|.++|.+|. .+. ++|++|+|++|++++ +| .+.++++|++|+|++|.|+ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 56677889999999999998886 443 799999999999996 77 9999999999999999999 6788888
Q ss_pred CCCCCCeeecCCCcccCCCCccccCCCCCCeeEecccccccccc--ccC-CCCcCeEEccCccCcccCcc
Q 005001 175 NLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLN--VFS-GLPLTTLNVANNHFSGWIPR 241 (720)
Q Consensus 175 ~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~-~~~L~~l~l~~N~l~g~ip~ 241 (720)
.+++|++|+|++|++++ +| .+..+++|++|+|++|+|++..+ .+. ..+|+.|++++|.+++.+|.
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 88999999999999996 56 68899999999999999997433 333 35699999999999988765
No 385
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=9.5e-14 Score=131.08 Aligned_cols=103 Identities=22% Similarity=0.246 Sum_probs=89.3
Q ss_pred EEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEEccccc
Q 005001 87 SIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNS 164 (720)
Q Consensus 87 ~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~ 164 (720)
.|++++|+|+. +|..+. ++|++|+|++|+|++..|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 13 ~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 45566677765 555553 8899999999999988887665 899999999999997777788999999999999999
Q ss_pred cccccccccCCCCCCCeeecCCCcccCC
Q 005001 165 LTQSIGDIFGNLAGLATLDLSFNNFSGD 192 (720)
Q Consensus 165 l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 192 (720)
|++..+..|..+++|++|+|++|.++..
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 9988888899999999999999999853
No 386
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.44 E-value=3.1e-15 Score=165.23 Aligned_cols=174 Identities=17% Similarity=0.196 Sum_probs=115.0
Q ss_pred CEEEEEcCCCCCccc----ccccccCCCCCCEEEccCCCCCCCCC----CC---CCCccceeccccccCcCC----CCcc
Q 005001 84 AVVSIDISGLGLSGT----MGYLLSDLLSLRKFDLSGNSIHDTIP----YQ---LPPNLTSLNLASNNFSGN----LPYS 148 (720)
Q Consensus 84 ~v~~l~l~~~~l~g~----~~~~l~~l~~L~~L~L~~N~l~~~~p----~~---~~~~L~~L~L~~N~l~g~----~p~~ 148 (720)
+++.|+|++|++++. ++..+..+++|++|+|++|.+++... .. -.++|++|+|++|++++. ++..
T Consensus 200 ~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 279 (461)
T 1z7x_W 200 QLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRV 279 (461)
T ss_dssp CCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHH
T ss_pred CceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHH
Confidence 566666666666653 45566667777777777777653211 11 125777777777777743 5666
Q ss_pred ccccCCccEEEccccccccccccccCC-----CCCCCeeecCCCcccCC----CCccccCCCCCCeeEecccccccccc-
Q 005001 149 IASMVSLSYLNVSRNSLTQSIGDIFGN-----LAGLATLDLSFNNFSGD----LPNSFISLSNISSLYLQNNQVTGSLN- 218 (720)
Q Consensus 149 ~~~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~~~- 218 (720)
+.++++|++|+|++|.+++..+..+.. .++|+.|+|++|++++. ++..+..+++|++|+|++|+|++...
T Consensus 280 l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 359 (461)
T 1z7x_W 280 LRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVR 359 (461)
T ss_dssp HHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHH
T ss_pred HhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHH
Confidence 777778888888888777554443332 25788888888887754 45556677888888888888876421
Q ss_pred c----cC--CCCcCeEEccCccCcc----cCcccc---cccceeeecCCcCC
Q 005001 219 V----FS--GLPLTTLNVANNHFSG----WIPREL---ISIRTFIYDGNSFD 257 (720)
Q Consensus 219 ~----~~--~~~L~~l~l~~N~l~g----~ip~~l---~~l~~l~l~~n~~~ 257 (720)
. +. ..+|+.|+|++|.+++ .+|..+ .+|+.|++.+|++.
T Consensus 360 ~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 360 ELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred HHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 1 11 3468888888888876 666553 56777888888765
No 387
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.42 E-value=6.4e-15 Score=162.67 Aligned_cols=174 Identities=20% Similarity=0.214 Sum_probs=141.4
Q ss_pred CEEEEEcCCCCCcc----cccccccCCCCCCEEEccCCCCCCCCCCCC-------CCccceeccccccCcCC----CCcc
Q 005001 84 AVVSIDISGLGLSG----TMGYLLSDLLSLRKFDLSGNSIHDTIPYQL-------PPNLTSLNLASNNFSGN----LPYS 148 (720)
Q Consensus 84 ~v~~l~l~~~~l~g----~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~-------~~~L~~L~L~~N~l~g~----~p~~ 148 (720)
+++.|+|++|+++. .++..+..+++|++|+|++|.+++..+..+ .++|++|+|++|++++. ++..
T Consensus 86 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 165 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred ceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHH
Confidence 69999999999984 678899999999999999999975433322 24799999999999974 4667
Q ss_pred ccccCCccEEEccccccccccccccC-----CCCCCCeeecCCCcccCC----CCccccCCCCCCeeEeccccccccc--
Q 005001 149 IASMVSLSYLNVSRNSLTQSIGDIFG-----NLAGLATLDLSFNNFSGD----LPNSFISLSNISSLYLQNNQVTGSL-- 217 (720)
Q Consensus 149 ~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~~-- 217 (720)
+..+++|++|+|++|.+++..+..+. .+++|+.|+|++|++++. ++..+..+++|++|+|++|+|++..
T Consensus 166 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~ 245 (461)
T 1z7x_W 166 LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMA 245 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHH
T ss_pred HhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHH
Confidence 77889999999999999876655554 367999999999999964 5777888999999999999998732
Q ss_pred ---ccc--CCCCcCeEEccCccCccc----Cccc---ccccceeeecCCcCC
Q 005001 218 ---NVF--SGLPLTTLNVANNHFSGW----IPRE---LISIRTFIYDGNSFD 257 (720)
Q Consensus 218 ---~~~--~~~~L~~l~l~~N~l~g~----ip~~---l~~l~~l~l~~n~~~ 257 (720)
+.+ ...+|+.|+|++|.+++. +|.. +.+|+.|++.+|.+.
T Consensus 246 ~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~ 297 (461)
T 1z7x_W 246 ELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELG 297 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCH
T ss_pred HHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCc
Confidence 222 235699999999999864 5654 467889999999874
No 388
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.42 E-value=4.5e-13 Score=126.88 Aligned_cols=108 Identities=19% Similarity=0.205 Sum_probs=93.2
Q ss_pred EEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEEcccc
Q 005001 86 VSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRN 163 (720)
Q Consensus 86 ~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N 163 (720)
+.+++++|+|+ .+|..+. ++|++|+|++|+|++..|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 46888899985 5666664 8999999999999988887765 89999999999999766667899999999999999
Q ss_pred ccccccccccCCCCCCCeeecCCCcccCCCCccc
Q 005001 164 SLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSF 197 (720)
Q Consensus 164 ~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~ 197 (720)
+|++..+..|..+++|++|+|++|.+. ..+..+
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~-c~~~~~ 124 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD-CECRDI 124 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC-TTBGGG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc-cccccH
Confidence 999877778999999999999999998 444433
No 389
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.42 E-value=5.6e-13 Score=141.52 Aligned_cols=172 Identities=16% Similarity=0.164 Sum_probs=137.9
Q ss_pred CCEEEEEcCCCCCcccccc-cccCCCCCCE-EEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEE
Q 005001 83 SAVVSIDISGLGLSGTMGY-LLSDLLSLRK-FDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYL 158 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~-~l~~l~~L~~-L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L 158 (720)
.+++.|+|++|.+.+.++. .|.+|++|.+ +++++|+|+...|..+. ++|++|++++|+|++..+..+....++..|
T Consensus 54 ~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l 133 (350)
T 4ay9_X 54 GDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLL 133 (350)
T ss_dssp TTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEE
T ss_pred CCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhh
Confidence 5799999999999887765 7899999876 67778999966666554 899999999999997777778888899999
Q ss_pred Eccc-cccccccccccCCCC-CCCeeecCCCcccCCCCccccCCCCCCeeEecc-ccccccccc-cCC-CCcCeEEccCc
Q 005001 159 NVSR-NSLTQSIGDIFGNLA-GLATLDLSFNNFSGDLPNSFISLSNISSLYLQN-NQVTGSLNV-FSG-LPLTTLNVANN 233 (720)
Q Consensus 159 ~L~~-N~l~~~~p~~~~~l~-~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~-N~l~~~~~~-~~~-~~L~~l~l~~N 233 (720)
++.+ |++....+..|..+. .|+.|+|++|+|+ .+|.......+|+.|++++ |.++...+. +.. .+|+.|+|++|
T Consensus 134 ~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N 212 (350)
T 4ay9_X 134 DIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRT 212 (350)
T ss_dssp EEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTS
T ss_pred hhccccccccccccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCC
Confidence 9976 677766667777775 6899999999999 5777777778999999986 566654433 333 45999999999
Q ss_pred cCcccCcccccccceeeecCCc
Q 005001 234 HFSGWIPRELISIRTFIYDGNS 255 (720)
Q Consensus 234 ~l~g~ip~~l~~l~~l~l~~n~ 255 (720)
+|+...+..+.+++.|...++.
T Consensus 213 ~l~~lp~~~~~~L~~L~~l~~~ 234 (350)
T 4ay9_X 213 RIHSLPSYGLENLKKLRARSTY 234 (350)
T ss_dssp CCCCCCSSSCTTCCEEECTTCT
T ss_pred CcCccChhhhccchHhhhccCC
Confidence 9995444568899999877664
No 390
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.33 E-value=1.4e-12 Score=138.22 Aligned_cols=110 Identities=19% Similarity=0.230 Sum_probs=77.0
Q ss_pred CCCCceeEecCCCEEEEEcCCCCCcccccccccCCCCCCEEEccC-CCCCCCCCCCCCCccceeccccccCcCCCCcccc
Q 005001 72 GESWKGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSG-NSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIA 150 (720)
Q Consensus 72 ~~~w~gv~c~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~ 150 (720)
.|.|.+|.|++. |+|++ +|. |..+++|++|+|++ |+|+ +..|..|.
T Consensus 7 ~C~~~~v~~~~~---------n~l~~-ip~-l~~~~~L~~L~l~~~n~l~----------------------~~~~~~~~ 53 (347)
T 2ifg_A 7 PHGSSGLRCTRD---------GALDS-LHH-LPGAENLTELYIENQQHLQ----------------------HLELRDLR 53 (347)
T ss_dssp CSSSSCEECCSS---------CCCTT-TTT-SCSCSCCSEEECCSCSSCC----------------------EECGGGSC
T ss_pred cccCCEEEcCCC---------CCCCc-cCC-CCCCCCeeEEEccCCCCCC----------------------CcChhHhc
Confidence 457877777532 15554 565 77777777777764 6555 34456677
Q ss_pred ccCCccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccc
Q 005001 151 SMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTG 215 (720)
Q Consensus 151 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~ 215 (720)
+|++|++|+|++|+|++..|..|.+|++|+.|+|++|+|++..+..|..++ |+.|+|++|.|..
T Consensus 54 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 54 GLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred cccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 788888888888888887777888888888888888888854444455554 8888888888775
No 391
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.30 E-value=3.4e-12 Score=135.21 Aligned_cols=103 Identities=18% Similarity=0.189 Sum_probs=92.1
Q ss_pred eeccccc-cCcCCCCccccccCCccEEEccc-cccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEecc
Q 005001 133 SLNLASN-NFSGNLPYSIASMVSLSYLNVSR-NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQN 210 (720)
Q Consensus 133 ~L~L~~N-~l~g~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 210 (720)
.++++++ +|+ .+|. +..+++|+.|+|++ |+|++..+..|++|++|+.|+|++|+|++..|..|.+|++|+.|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4577777 777 5888 99999999999996 999999999999999999999999999998899999999999999999
Q ss_pred ccccccccc-cCCCCcCeEEccCccCcc
Q 005001 211 NQVTGSLNV-FSGLPLTTLNVANNHFSG 237 (720)
Q Consensus 211 N~l~~~~~~-~~~~~L~~l~l~~N~l~g 237 (720)
|+|++.++. +...+|+.|+|++|.|..
T Consensus 90 N~l~~~~~~~~~~~~L~~l~l~~N~~~c 117 (347)
T 2ifg_A 90 NALESLSWKTVQGLSLQELVLSGNPLHC 117 (347)
T ss_dssp SCCSCCCSTTTCSCCCCEEECCSSCCCC
T ss_pred CccceeCHHHcccCCceEEEeeCCCccC
Confidence 999987654 444569999999999974
No 392
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.23 E-value=1.5e-13 Score=146.59 Aligned_cols=162 Identities=14% Similarity=0.161 Sum_probs=118.4
Q ss_pred CCEEEEEcCCCCCcccccccccCC-----CCCCEEEccCCCCCCCCCCCCC---CccceeccccccCcCCCCccc-----
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDL-----LSLRKFDLSGNSIHDTIPYQLP---PNLTSLNLASNNFSGNLPYSI----- 149 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l-----~~L~~L~L~~N~l~~~~p~~~~---~~L~~L~L~~N~l~g~~p~~~----- 149 (720)
..++.|+|++|.|+......|..+ ++|++|+|++|.|+......+. ++|+.|+|++|+|+......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 468899999999987554444433 7899999999998743333332 689999999999985544444
Q ss_pred cccCCccEEEccccccccc----cccccCCCCCCCeeecCCCcccCC----CCccccCCCCCCeeEeccccccccc----
Q 005001 150 ASMVSLSYLNVSRNSLTQS----IGDIFGNLAGLATLDLSFNNFSGD----LPNSFISLSNISSLYLQNNQVTGSL---- 217 (720)
Q Consensus 150 ~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~~---- 217 (720)
...++|++|+|++|.|+.. ++..+..+++|++|+|++|+|++. ++..+...++|++|+|++|.|+...
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 2467899999999999753 455567788999999999998753 3555677789999999999997632
Q ss_pred c-cc-CCCCcCeEEccCccCcccCccccc
Q 005001 218 N-VF-SGLPLTTLNVANNHFSGWIPRELI 244 (720)
Q Consensus 218 ~-~~-~~~~L~~l~l~~N~l~g~ip~~l~ 244 (720)
. .+ ...+|+.|+|++|.|++.-...+.
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~ 260 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSSEGRQVLR 260 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCHHHHHHHH
T ss_pred HHHHHhCCCCCEEeccCCCCCHHHHHHHH
Confidence 1 11 234599999999998765444443
No 393
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.19 E-value=4.5e-11 Score=121.20 Aligned_cols=144 Identities=12% Similarity=0.050 Sum_probs=110.5
Q ss_pred HhcCCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCCccccceEEeecCeEEEE
Q 005001 408 ATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 408 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV 486 (720)
....|.....++.|+.+.||++... ++.+++|....... .....+.+|+.+++.+ ++..+.++++++...+..|+|
T Consensus 12 ~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~--~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 12 LIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK--GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp HHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT--TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred HhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC--CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 3456777788898999999999764 68899999864321 1123577888888877 367788999999888899999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC---------------------------------- 532 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---------------------------------- 532 (720)
|||++|.+|.+.+. +......++.+++++|+.||+..
T Consensus 89 ~e~i~G~~l~~~~~---------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (263)
T 3tm0_A 89 MSEADGVLCSEEYE---------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWE 159 (263)
T ss_dssp EECCSSEEHHHHCC---------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGS
T ss_pred EEecCCeehhhccC---------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccc
Confidence 99999999987531 11223467889999999999810
Q ss_pred ----------------------CCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 533 ----------------------LPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 533 ----------------------~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
.+.++|+|++|.||++++++.+.|+||+.+.
T Consensus 160 ~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 160 EDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp TTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 0358999999999999876566799999764
No 394
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.09 E-value=4e-12 Score=135.58 Aligned_cols=153 Identities=21% Similarity=0.175 Sum_probs=115.3
Q ss_pred CCCCCEEEccCCCCCCCCCCCC-------CCccceeccccccCcCCCCccc-cccCCccEEEcccccccccccccc----
Q 005001 106 LLSLRKFDLSGNSIHDTIPYQL-------PPNLTSLNLASNNFSGNLPYSI-ASMVSLSYLNVSRNSLTQSIGDIF---- 173 (720)
Q Consensus 106 l~~L~~L~L~~N~l~~~~p~~~-------~~~L~~L~L~~N~l~g~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~~---- 173 (720)
++.|+.|+|++|.|+......+ .++|++|+|++|.|+......+ ..+++|+.|+|++|.|+......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 4679999999999984322221 2589999999999985433333 357899999999999986655544
Q ss_pred -CCCCCCCeeecCCCcccC----CCCccccCCCCCCeeEeccccccccc-----cc-cCCCCcCeEEccCccCccc----
Q 005001 174 -GNLAGLATLDLSFNNFSG----DLPNSFISLSNISSLYLQNNQVTGSL-----NV-FSGLPLTTLNVANNHFSGW---- 238 (720)
Q Consensus 174 -~~l~~L~~L~l~~N~l~g----~~p~~~~~l~~L~~L~l~~N~l~~~~-----~~-~~~~~L~~l~l~~N~l~g~---- 238 (720)
...++|+.|+|++|+|+. .++..+..+++|++|+|++|+|++.- .. ....+|+.|+|++|.|++.
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 356899999999999974 24445577899999999999998632 11 2234699999999999753
Q ss_pred Ccccc---cccceeeecCCcCCC
Q 005001 239 IPREL---ISIRTFIYDGNSFDN 258 (720)
Q Consensus 239 ip~~l---~~l~~l~l~~n~~~~ 258 (720)
++..+ .+|+.|++++|++..
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCCH
T ss_pred HHHHHHhCCCCCEEeccCCCCCH
Confidence 33333 679999999998753
No 395
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.06 E-value=1.1e-10 Score=117.99 Aligned_cols=135 Identities=19% Similarity=0.171 Sum_probs=97.1
Q ss_pred CCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCC--ccccceEEeecCeEEEEEEe
Q 005001 412 FSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN--IVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 412 y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lV~e~ 489 (720)
|....+.+.|..+.||++...+|..+++|...... ...+.+|+.+++.+.+.+ +.+++++....+..++||||
T Consensus 22 ~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~-----~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~ 96 (264)
T 1nd4_A 22 YDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA-----LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGE 96 (264)
T ss_dssp CEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT-----TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEEC
T ss_pred CceEecccCCCCceEEEEecCCCCeEEEEeCCccc-----chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEe
Confidence 33333334566799999987778889999876431 234567777777774434 55688888877889999999
Q ss_pred cCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------
Q 005001 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC------------------------------------- 532 (720)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~------------------------------------- 532 (720)
++|.+|. .. ..+ ...++.++++.|..||+..
T Consensus 97 i~G~~l~--~~-------~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (264)
T 1nd4_A 97 VPGQDLL--SS-------HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQG 164 (264)
T ss_dssp CSSEETT--TS-------CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTT
T ss_pred cCCcccC--cC-------cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccC
Confidence 9998884 21 011 2356777888888888752
Q ss_pred ------------------CCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 533 ------------------LPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 533 ------------------~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
.+.++|+|++|.||++++++.+.|+||+.+.
T Consensus 165 ~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 165 LAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp CCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred ccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 0129999999999999877667799999874
No 396
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.97 E-value=8.7e-10 Score=115.69 Aligned_cols=94 Identities=18% Similarity=0.126 Sum_probs=62.5
Q ss_pred cCCccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCC-eeEeccccccccc-cccCC-CCcCeE
Q 005001 152 MVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNIS-SLYLQNNQVTGSL-NVFSG-LPLTTL 228 (720)
Q Consensus 152 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~-~L~l~~N~l~~~~-~~~~~-~~L~~l 228 (720)
+++|+.|+|++|+++...+..|.++++|+.|+|.+| ++...+..|.++++|+ .|++.+ +++... ..|.+ .+|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 677777777777777666667777777888877777 6644555677777777 777777 555433 23333 347777
Q ss_pred EccCccCcccCcccccccc
Q 005001 229 NVANNHFSGWIPRELISIR 247 (720)
Q Consensus 229 ~l~~N~l~g~ip~~l~~l~ 247 (720)
++++|+++..-+..|.++.
T Consensus 303 ~l~~n~i~~I~~~aF~~~~ 321 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGV 321 (329)
T ss_dssp EECSSCCCEECTTTTCTTC
T ss_pred EeCCCccCccchhhhcCCc
Confidence 7777777744444554443
No 397
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.96 E-value=1.4e-09 Score=115.70 Aligned_cols=143 Identities=16% Similarity=0.256 Sum_probs=105.5
Q ss_pred ccceeccCCCcEEEEEEEcCCcEEEEEEcc--ccccChHHHHHHHHHHHHhhcCC--CCCccccceEEeec---CeEEEE
Q 005001 414 QEFLIGEGSLGRVYRAEFANGKIMAVKKID--NAALSLQEEDNFLEAVSNMSRLR--HPNIVTLAGYCAEH---GQRLLV 486 (720)
Q Consensus 414 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~---~~~~lV 486 (720)
..+.|+.|.++.||+....+ ..+++|+.. .... ......+.+|+.+++.+. +..+.+++.++.+. +..++|
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~-~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v 119 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKL-LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI 119 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCC-CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence 35578999999999998764 678888775 3221 122346778888888876 45577888887766 458999
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC---------------------------------- 532 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---------------------------------- 532 (720)
|||++|..+.+.. ...++..++..++.++++.|+.||+..
T Consensus 120 me~v~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (359)
T 3dxp_A 120 MEFVSGRVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETES 193 (359)
T ss_dssp EECCCCBCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSC
T ss_pred EEecCCeecCCCc------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcC
Confidence 9999997775421 234678888999999999999999831
Q ss_pred ---------------------CCCcEEecCCCCCEEeCCCCc--eEEcccCCCcc
Q 005001 533 ---------------------LPSVVHRNFKSANILLDDELN--PHLSDCGLAAL 564 (720)
Q Consensus 533 ---------------------~~~iiH~Dlkp~NIll~~~~~--~kl~Dfg~a~~ 564 (720)
.+.++|+|+++.||+++.++. +.|+||+.+..
T Consensus 194 ~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 194 IPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred ChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247899999999999997753 68999998864
No 398
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.95 E-value=6.4e-11 Score=134.90 Aligned_cols=177 Identities=11% Similarity=0.068 Sum_probs=118.8
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEcc-----------CCCCCCCCCCCC---CCccceeccccccCcCCCCcc
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLS-----------GNSIHDTIPYQL---PPNLTSLNLASNNFSGNLPYS 148 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~-----------~N~l~~~~p~~~---~~~L~~L~L~~N~l~g~~p~~ 148 (720)
.+++.|+|+++-..+.++..+..+++|++|+|+ .|.+++.....+ .++|++|+|+.|++++..+..
T Consensus 318 ~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~ 397 (592)
T 3ogk_B 318 PNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLES 397 (592)
T ss_dssp TTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHH
T ss_pred cCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHH
Confidence 467888888333333445555678888888888 356653322111 368888888888888777777
Q ss_pred ccc-cCCccEEEcc----ccccccc-----cccccCCCCCCCeeecCCC--cccCCCCcccc-CCCCCCeeEeccccccc
Q 005001 149 IAS-MVSLSYLNVS----RNSLTQS-----IGDIFGNLAGLATLDLSFN--NFSGDLPNSFI-SLSNISSLYLQNNQVTG 215 (720)
Q Consensus 149 ~~~-l~~L~~L~L~----~N~l~~~-----~p~~~~~l~~L~~L~l~~N--~l~g~~p~~~~-~l~~L~~L~l~~N~l~~ 215 (720)
++. +++|+.|+|+ .|.+++. ++..+.++++|+.|+|+++ .+++..+..++ .+++|++|+|++|++++
T Consensus 398 l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~ 477 (592)
T 3ogk_B 398 IGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESD 477 (592)
T ss_dssp HHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSH
T ss_pred HHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCH
Confidence 765 8888888886 6777763 4445667888888888743 36655555554 37788888888888876
Q ss_pred -cccc-c-CCCCcCeEEccCccCcccCcc----cccccceeeecCCcCCCC
Q 005001 216 -SLNV-F-SGLPLTTLNVANNHFSGWIPR----ELISIRTFIYDGNSFDNG 259 (720)
Q Consensus 216 -~~~~-~-~~~~L~~l~l~~N~l~g~ip~----~l~~l~~l~l~~n~~~~~ 259 (720)
.++. . ...+|+.|+|++|.|++.... .+.+|+.|++.+|++...
T Consensus 478 ~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 478 EGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred HHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 2332 2 234588888888888654332 346788888888886543
No 399
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.91 E-value=6.1e-10 Score=115.48 Aligned_cols=187 Identities=19% Similarity=0.230 Sum_probs=122.3
Q ss_pred cceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcC-CCCC--ccccceEEeecC---eEEEEEE
Q 005001 415 EFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPN--IVTLAGYCAEHG---QRLLVYE 488 (720)
Q Consensus 415 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~n--iv~l~~~~~~~~---~~~lV~e 488 (720)
.+.++.|....||++. ..+++|..... .....+.+|...++.+ .+.. +.+++......+ ..|+||+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~ 96 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFT 96 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEc
Confidence 3468999999999874 45888876432 3456788899988776 3333 334444333322 3489999
Q ss_pred ecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 005001 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC------------------------------------ 532 (720)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~------------------------------------ 532 (720)
+++|.+|.+... ..++..++..++.++++.++.||+..
T Consensus 97 ~i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
T 3sg8_A 97 KIKGVPLTPLLL------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQM 170 (304)
T ss_dssp CCCCEECCHHHH------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred ccCCeECCcccc------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccH
Confidence 999988865432 34677788888899999999998621
Q ss_pred -------------------CCCcEEecCCCCCEEeCC--CCceEEcccCCCccCCCCCccccc-------------cccc
Q 005001 533 -------------------LPSVVHRNFKSANILLDD--ELNPHLSDCGLAALTPNTERQVST-------------QMVG 578 (720)
Q Consensus 533 -------------------~~~iiH~Dlkp~NIll~~--~~~~kl~Dfg~a~~~~~~~~~~~~-------------~~~g 578 (720)
.+.++|+|++|.||++++ +..+.|+||+.+.......+-... .+..
T Consensus 171 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~ 250 (304)
T 3sg8_A 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILN 250 (304)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHH
Confidence 135799999999999998 556789999988653221110000 0001
Q ss_pred cccccC-ccccccCCCcccchhhhHHHHHHHHHhCCCCCC
Q 005001 579 AFGYSA-PEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (720)
Q Consensus 579 t~~y~a-PE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~ 617 (720)
..+... |+..... ....+.|++|.++|.+.+|..+|.
T Consensus 251 ~Y~~~~~~~~~~r~--~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 251 HYKHKDIPTVLEKY--RMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHTCSCHHHHHHHH--HHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HcCCCCcHHHHHHH--HHHHHHHHHHHHHHHHHcCCHHHH
Confidence 111122 2222111 223689999999999999988763
No 400
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.90 E-value=4.5e-10 Score=127.90 Aligned_cols=166 Identities=13% Similarity=0.102 Sum_probs=88.2
Q ss_pred EEEEEcCCCC-Ccc-cccccccCCCCCCEEEccCCCCCCCCCCC------CCCccceeccccccCc----CCCCcccccc
Q 005001 85 VVSIDISGLG-LSG-TMGYLLSDLLSLRKFDLSGNSIHDTIPYQ------LPPNLTSLNLASNNFS----GNLPYSIASM 152 (720)
Q Consensus 85 v~~l~l~~~~-l~g-~~~~~l~~l~~L~~L~L~~N~l~~~~p~~------~~~~L~~L~L~~N~l~----g~~p~~~~~l 152 (720)
++.|+|+++. ++. .++....++++|++|+|++|.+++.-... -.++|++|+|++|.++ +.++..+.++
T Consensus 140 L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~ 219 (592)
T 3ogk_B 140 LETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNC 219 (592)
T ss_dssp CCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHC
T ss_pred CcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhC
Confidence 6777776664 111 12223346677777777777665442111 1256777777777765 2334445566
Q ss_pred CCccEEEccccccccccccccCCCCCCCeeecCCCcc--------------------------cCCCCccccCCCCCCee
Q 005001 153 VSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNF--------------------------SGDLPNSFISLSNISSL 206 (720)
Q Consensus 153 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l--------------------------~g~~p~~~~~l~~L~~L 206 (720)
++|+.|+|++|.+.+ +|..+..+++|+.|+++++.. .+.+|..+..+++|++|
T Consensus 220 ~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L 298 (592)
T 3ogk_B 220 RSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKL 298 (592)
T ss_dssp TTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGCCEE
T ss_pred CCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchhHHHHHHhhcCCCcEE
Confidence 777777777776664 445555555555555543211 12445555566666666
Q ss_pred Eecccccccccc--c-cCCCCcCeEEccCccCcc-cCcc---cccccceeeec
Q 005001 207 YLQNNQVTGSLN--V-FSGLPLTTLNVANNHFSG-WIPR---ELISIRTFIYD 252 (720)
Q Consensus 207 ~l~~N~l~~~~~--~-~~~~~L~~l~l~~N~l~g-~ip~---~l~~l~~l~l~ 252 (720)
+|++|.+++... . ....+|+.|+|+ |.+.+ .++. .+.+|+.|++.
T Consensus 299 ~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~ 350 (592)
T 3ogk_B 299 DLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIE 350 (592)
T ss_dssp EETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEE
T ss_pred ecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEee
Confidence 666666554321 1 222346666666 33322 2221 23456666665
No 401
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.84 E-value=5.1e-09 Score=109.80 Aligned_cols=144 Identities=18% Similarity=0.236 Sum_probs=116.6
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCC-------------CCCCC----------------------
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDT-------------IPYQL---------------------- 127 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~-------------~p~~~---------------------- 127 (720)
..++.|+|++ +++..-+.+|.++++|+.|+|++|.++.. +|...
T Consensus 101 ~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~ 179 (329)
T 3sb4_A 101 QTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLE 179 (329)
T ss_dssp TTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCE
T ss_pred CCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccc
Confidence 4788899998 88877778899999999999999976311 11111
Q ss_pred ---------------------------------------------CCccceeccccccCcCCCCccccccCCccEEEccc
Q 005001 128 ---------------------------------------------PPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (720)
Q Consensus 128 ---------------------------------------------~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 162 (720)
.++|+.|+|++|+++..-+..|.+|++|+.|+|.+
T Consensus 180 ~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~ 259 (329)
T 3sb4_A 180 TTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPH 259 (329)
T ss_dssp EEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCT
T ss_pred eeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCc
Confidence 35899999999999965567899999999999999
Q ss_pred cccccccccccCCCCCCC-eeecCCCcccCCCCccccCCCCCCeeEecccccccccc-ccCCC-CcCeEE
Q 005001 163 NSLTQSIGDIFGNLAGLA-TLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLN-VFSGL-PLTTLN 229 (720)
Q Consensus 163 N~l~~~~p~~~~~l~~L~-~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~-~L~~l~ 229 (720)
| ++...+.+|.++++|+ .|+|.+ +++...+..|.++++|+.|++++|+++...+ .|... +|+.|+
T Consensus 260 n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 260 N-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp T-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred c-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 8 8877788999999999 999999 7875667889999999999999999987654 44443 577765
No 402
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.83 E-value=3.3e-11 Score=121.00 Aligned_cols=116 Identities=17% Similarity=0.153 Sum_probs=53.0
Q ss_pred CCceeEecCC--CEEEEEcCC---CCCccccc-ccccCCCCCCEEEccCCCCCCCCCCCCC---Cccce--eccccccCc
Q 005001 74 SWKGVACEGS--AVVSIDISG---LGLSGTMG-YLLSDLLSLRKFDLSGNSIHDTIPYQLP---PNLTS--LNLASNNFS 142 (720)
Q Consensus 74 ~w~gv~c~~~--~v~~l~l~~---~~l~g~~~-~~l~~l~~L~~L~L~~N~l~~~~p~~~~---~~L~~--L~L~~N~l~ 142 (720)
+|.|+.|+.. +|+.+...+ ..+.|.+. ..+..++. .|...+|..++.++.+-. +.|.. ++++.|+..
T Consensus 79 ~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~ 156 (267)
T 3rw6_A 79 AVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRS 156 (267)
T ss_dssp HTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHH
T ss_pred hcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCHHH
Confidence 6999999754 565554443 23333332 22222222 233333333333332211 34444 555555322
Q ss_pred ---CCCCccccccCCccEEEcccccccc--ccccccCCCCCCCeeecCCCcccC
Q 005001 143 ---GNLPYSIASMVSLSYLNVSRNSLTQ--SIGDIFGNLAGLATLDLSFNNFSG 191 (720)
Q Consensus 143 ---g~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~g 191 (720)
+.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++
T Consensus 157 ~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~ 210 (267)
T 3rw6_A 157 CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKS 210 (267)
T ss_dssp HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCS
T ss_pred HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCC
Confidence 1111122345555555555555555 333444455555555555555553
No 403
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.73 E-value=6.4e-10 Score=126.64 Aligned_cols=128 Identities=15% Similarity=0.143 Sum_probs=82.2
Q ss_pred CCCEEEEEcCCCCCccccccccc-CCCCCCEEEccCC-CCCCC-CCCCC--CCccceeccccccCcCCCCcccc----cc
Q 005001 82 GSAVVSIDISGLGLSGTMGYLLS-DLLSLRKFDLSGN-SIHDT-IPYQL--PPNLTSLNLASNNFSGNLPYSIA----SM 152 (720)
Q Consensus 82 ~~~v~~l~l~~~~l~g~~~~~l~-~l~~L~~L~L~~N-~l~~~-~p~~~--~~~L~~L~L~~N~l~g~~p~~~~----~l 152 (720)
..+++.|+|+++.+++..+..+. .+++|++|+|++| .+++. ++... .++|++|+|++|.+++..+..+. .+
T Consensus 104 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 104 YTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 34688888888888777766665 6788888888887 44421 22111 26788888888887765554443 56
Q ss_pred CCccEEEccccc--cccc-cccccCCCCCCCeeecCCC-cccCCCCccccCCCCCCeeEecc
Q 005001 153 VSLSYLNVSRNS--LTQS-IGDIFGNLAGLATLDLSFN-NFSGDLPNSFISLSNISSLYLQN 210 (720)
Q Consensus 153 ~~L~~L~L~~N~--l~~~-~p~~~~~l~~L~~L~l~~N-~l~g~~p~~~~~l~~L~~L~l~~ 210 (720)
++|+.|+|++|. ++.. ++..+..+++|+.|+|++| .+.+ +|..+..+++|+.|+++.
T Consensus 184 ~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~ 244 (594)
T 2p1m_B 184 TSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGG 244 (594)
T ss_dssp CCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSB
T ss_pred CcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEccccc
Confidence 688888888876 3211 2222344678888888877 3443 555566666666666443
No 404
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.73 E-value=2.2e-10 Score=130.56 Aligned_cols=102 Identities=15% Similarity=0.080 Sum_probs=55.2
Q ss_pred CCEEEEEcCCCCCccccc-ccccCCCCCCEEEccCCCCCCCCCCCC---CCccceecc---------ccccCcCCCCccc
Q 005001 83 SAVVSIDISGLGLSGTMG-YLLSDLLSLRKFDLSGNSIHDTIPYQL---PPNLTSLNL---------ASNNFSGNLPYSI 149 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~-~~l~~l~~L~~L~L~~N~l~~~~p~~~---~~~L~~L~L---------~~N~l~g~~p~~~ 149 (720)
.+++.|+|++|.+++... ..+.++++|++|+|++| +++.....+ .++|+.|+| +.|.+++.....+
T Consensus 289 ~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l 367 (594)
T 2p1m_B 289 SRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSV 367 (594)
T ss_dssp TTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHH
T ss_pred CCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHH
Confidence 578899999998775433 33567788888888877 331111111 245666665 2234443222222
Q ss_pred c-ccCCccEEEccccccccccccccC-CCCCCCeeecC
Q 005001 150 A-SMVSLSYLNVSRNSLTQSIGDIFG-NLAGLATLDLS 185 (720)
Q Consensus 150 ~-~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~l~ 185 (720)
. ++++|++|+++.|++++.....+. .+++|+.|+|+
T Consensus 368 ~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~ 405 (594)
T 2p1m_B 368 SMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLC 405 (594)
T ss_dssp HHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEE
T ss_pred HHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEee
Confidence 2 355555555555555544444333 35555555555
No 405
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.58 E-value=1.3e-08 Score=107.46 Aligned_cols=172 Identities=15% Similarity=0.154 Sum_probs=93.3
Q ss_pred CCEEEEEcCCCCC---------cccccccccCCCCCCEEEccCCCCCCCCCCCCCCccceeccccccCcCCCCcccc--c
Q 005001 83 SAVVSIDISGLGL---------SGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIA--S 151 (720)
Q Consensus 83 ~~v~~l~l~~~~l---------~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~--~ 151 (720)
.++..|.+.++.. .+.+...+..+++|+.|+|++|.-. .++.--.++|+.|+|..|.++......+. .
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~~~~~~L~~L~L~~~~l~~~~l~~l~~~~ 217 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGKKPRPNLKSLEIISGGLPDSVVEDILGSD 217 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCSCBCTTCSEEEEECSBCCHHHHHHHHHSB
T ss_pred chhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eeccccCCCCcEEEEecCCCChHHHHHHHHcc
Confidence 3566666655432 1234455666777777777776311 12221136777777777776543333343 5
Q ss_pred cCCccEEEccc--cccccc-----ccccc--CCCCCCCeeecCCCcccCCCCcccc---CCCCCCeeEeccccccccc--
Q 005001 152 MVSLSYLNVSR--NSLTQS-----IGDIF--GNLAGLATLDLSFNNFSGDLPNSFI---SLSNISSLYLQNNQVTGSL-- 217 (720)
Q Consensus 152 l~~L~~L~L~~--N~l~~~-----~p~~~--~~l~~L~~L~l~~N~l~g~~p~~~~---~l~~L~~L~l~~N~l~~~~-- 217 (720)
+++|+.|+|+. |...+. +...+ ..+++|++|+|++|.+.+..+..+. .+++|++|+|+.|.|++.-
T Consensus 218 lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~ 297 (362)
T 2ra8_A 218 LPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGAR 297 (362)
T ss_dssp CTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHH
T ss_pred CCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHH
Confidence 77777777753 222111 11122 2467777777777777643333332 4667777777777776521
Q ss_pred --cc--cCCCCcCeEEccCccCcccCcccccc-c-ceeeecCCc
Q 005001 218 --NV--FSGLPLTTLNVANNHFSGWIPRELIS-I-RTFIYDGNS 255 (720)
Q Consensus 218 --~~--~~~~~L~~l~l~~N~l~g~ip~~l~~-l-~~l~l~~n~ 255 (720)
.. -...+|+.|+|++|.|+...-..|.. + ..+++.+|.
T Consensus 298 ~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 298 LLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSLPMKIDVSDSQ 341 (362)
T ss_dssp HHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHCCSEEECCSBC
T ss_pred HHHhhcccCCcceEEECCCCcCCHHHHHHHHHHcCCEEEecCCc
Confidence 11 11235777777777776443333332 2 345555554
No 406
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.56 E-value=2.7e-07 Score=96.17 Aligned_cols=136 Identities=15% Similarity=0.180 Sum_probs=100.2
Q ss_pred CCCccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCC----CCccccceEEeecCeEEEE
Q 005001 411 SFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH----PNIVTLAGYCAEHGQRLLV 486 (720)
Q Consensus 411 ~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~l~~~~~~~~~~~lV 486 (720)
.+...+.++.|....||+. |..+++|..... .....+.+|..+++.+.+ ..+.+++++ +..++|
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~----~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lv 105 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD----SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNI 105 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH----HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH----HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEE
Confidence 4556678999999999998 667888876432 223457888888777755 123444443 567899
Q ss_pred EEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC---------------------------------
Q 005001 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL--------------------------------- 533 (720)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~--------------------------------- 533 (720)
|||++|.++.+... ..++..++..++.++++.++.||+...
T Consensus 106 me~i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (320)
T 3r70_A 106 MKYIKGERITYEQY------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQ 179 (320)
T ss_dssp EECCCCBCCCHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTT
T ss_pred EeecCCcccccccc------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcc
Confidence 99999988864332 345677777888888888888885422
Q ss_pred ---------------------------CCcEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 534 ---------------------------PSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 534 ---------------------------~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
+.++|+|++|.||+++.++.+.|+||+.+..
T Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 180 LLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp CCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred cccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2349999999999999876679999998864
No 407
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.54 E-value=3.9e-08 Score=103.83 Aligned_cols=172 Identities=15% Similarity=0.154 Sum_probs=117.0
Q ss_pred CCEEEEEcCCCCCcc-c-------ccccccCCCCCCEEEccCCCCCCC----C-CCCC------CCccceeccccccCcC
Q 005001 83 SAVVSIDISGLGLSG-T-------MGYLLSDLLSLRKFDLSGNSIHDT----I-PYQL------PPNLTSLNLASNNFSG 143 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g-~-------~~~~l~~l~~L~~L~L~~N~l~~~----~-p~~~------~~~L~~L~L~~N~l~g 143 (720)
.+|+.|.+...+..| . +..++..+++|+.|.+..+.+... + ...+ .++|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l- 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL- 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-
Confidence 468888888776653 2 234566789999999977644210 1 1112 279999999988311
Q ss_pred CCCccccccCCccEEEccccccccccccccC--CCCCCCeeecCC--CcccCC-----CCccc--cCCCCCCeeEecccc
Q 005001 144 NLPYSIASMVSLSYLNVSRNSLTQSIGDIFG--NLAGLATLDLSF--NNFSGD-----LPNSF--ISLSNISSLYLQNNQ 212 (720)
Q Consensus 144 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~l~~--N~l~g~-----~p~~~--~~l~~L~~L~l~~N~ 212 (720)
.++. + .+++|+.|+|..|.++......++ .+++|+.|+|+. |...|. +...+ ..+++|++|+|.+|.
T Consensus 186 ~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~ 263 (362)
T 2ra8_A 186 SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAE 263 (362)
T ss_dssp BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCT
T ss_pred eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCC
Confidence 2343 4 389999999999998765545554 789999999863 332222 11122 357899999999999
Q ss_pred cccccc-----ccCCCCcCeEEccCccCccc----Ccc---cccccceeeecCCcCC
Q 005001 213 VTGSLN-----VFSGLPLTTLNVANNHFSGW----IPR---ELISIRTFIYDGNSFD 257 (720)
Q Consensus 213 l~~~~~-----~~~~~~L~~l~l~~N~l~g~----ip~---~l~~l~~l~l~~n~~~ 257 (720)
+++... .....+|+.|+|+.|.|.+. ++. .+.+|+.|++.+|.+.
T Consensus 264 i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 264 EQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp THHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 986331 11234599999999999864 333 3578999999988764
No 408
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.50 E-value=3.8e-09 Score=100.74 Aligned_cols=117 Identities=14% Similarity=0.136 Sum_probs=58.3
Q ss_pred ccccccccCCCCCCEEEccCC-CCCCCCC----CCC--CCccceeccccccCcCC----CCccccccCCccEEEcccccc
Q 005001 97 GTMGYLLSDLLSLRKFDLSGN-SIHDTIP----YQL--PPNLTSLNLASNNFSGN----LPYSIASMVSLSYLNVSRNSL 165 (720)
Q Consensus 97 g~~~~~l~~l~~L~~L~L~~N-~l~~~~p----~~~--~~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~L~~N~l 165 (720)
..+...+...+.|++|+|++| .|+..-- ..+ .++|++|+|++|.|+.. +...+...++|++|+|++|.|
T Consensus 26 ~~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i 105 (185)
T 1io0_A 26 ETLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFI 105 (185)
T ss_dssp HHHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCC
T ss_pred HHHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcC
Confidence 344556667777777777777 7662111 111 14555555555555421 223333445566666666655
Q ss_pred ccc----cccccCCCCCCCeeec--CCCcccCCC----CccccCCCCCCeeEeccccc
Q 005001 166 TQS----IGDIFGNLAGLATLDL--SFNNFSGDL----PNSFISLSNISSLYLQNNQV 213 (720)
Q Consensus 166 ~~~----~p~~~~~l~~L~~L~l--~~N~l~g~~----p~~~~~l~~L~~L~l~~N~l 213 (720)
+.. +...+...++|++|+| ++|.|+... ...+...++|++|+|++|.|
T Consensus 106 ~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 106 SGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp CHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred CHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 532 2334444455555555 555554321 12223334555555555544
No 409
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.48 E-value=1.8e-08 Score=101.05 Aligned_cols=107 Identities=21% Similarity=0.253 Sum_probs=80.5
Q ss_pred eccccccCcCCCCc-cccccCCccE--EEccccccc---cccccccCCCCCCCeeecCCCcccC--CCCccccCCCCCCe
Q 005001 134 LNLASNNFSGNLPY-SIASMVSLSY--LNVSRNSLT---QSIGDIFGNLAGLATLDLSFNNFSG--DLPNSFISLSNISS 205 (720)
Q Consensus 134 L~L~~N~l~g~~p~-~~~~l~~L~~--L~L~~N~l~---~~~p~~~~~l~~L~~L~l~~N~l~g--~~p~~~~~l~~L~~ 205 (720)
|...+|..++.+.- .+...+.|.. ++++.|+.. +.++-...++++|+.|+|++|+|++ .+|..+..+++|+.
T Consensus 121 l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~ 200 (267)
T 3rw6_A 121 MSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKI 200 (267)
T ss_dssp HHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCE
T ss_pred HHhccchhccccCHHHcCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCE
Confidence 44555665655542 3666677776 788888433 3333333578999999999999998 55677789999999
Q ss_pred eEecccccccc--ccccCCCCcCeEEccCccCcccCc
Q 005001 206 LYLQNNQVTGS--LNVFSGLPLTTLNVANNHFSGWIP 240 (720)
Q Consensus 206 L~l~~N~l~~~--~~~~~~~~L~~l~l~~N~l~g~ip 240 (720)
|+|++|+|++. +..+...+|++|+|++|.+++.+|
T Consensus 201 L~Ls~N~i~~~~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 201 LNLSGNELKSERELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp EECTTSCCCSGGGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred EECCCCccCCchhhhhcccCCcceEEccCCcCccccC
Confidence 99999999984 344444489999999999998877
No 410
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.44 E-value=9.6e-07 Score=94.78 Aligned_cols=125 Identities=15% Similarity=0.186 Sum_probs=82.5
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCCCC--CccceeccccccCcCCCCccccccCCccEEEcc
Q 005001 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (720)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~ 161 (720)
.++.++|.+ ++...-..+|.++++|+.++|++|+++ .+|.... .+|+.+.|..| ++..-...|.++++|+.++|.
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~ 234 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIP 234 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECC
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEecC
Confidence 467777775 666666678888888999999888887 4443322 67888888744 664555677788888888887
Q ss_pred ccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEecccccc
Q 005001 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVT 214 (720)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 214 (720)
+| ++..-..+|.+ .+|+.+.| .|.++..-...|.++++|+.+++.+|.+.
T Consensus 235 ~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~ 284 (401)
T 4fdw_A 235 EN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFN 284 (401)
T ss_dssp TT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCC
T ss_pred CC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCcccc
Confidence 64 44444455555 56666666 34455344555666666777766666654
No 411
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.43 E-value=1.2e-06 Score=93.96 Aligned_cols=166 Identities=12% Similarity=0.118 Sum_probs=94.3
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCC-CCCC--CccceeccccccCcCCCCccccccCCccEEE
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIP-YQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLN 159 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 159 (720)
..++.|+|++|+++......|. .+.|+.+.|..| ++ .|+ ..+. ++|+.|+|..| ++..-...|.+ .+|+.+.
T Consensus 180 ~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~-~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~ 254 (401)
T 4fdw_A 180 YNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LK-EIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVK 254 (401)
T ss_dssp TTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CC-EECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEE
T ss_pred ccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hh-eehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEE
Confidence 3677888888877765555665 477777777644 55 233 2222 56777777654 44233344555 5677777
Q ss_pred ccccccccccccccCCCCCCCeeecCCCccc-----CCCCccccCCCCCCeeEeccccccccc-cccCC-CCcCeEEccC
Q 005001 160 VSRNSLTQSIGDIFGNLAGLATLDLSFNNFS-----GDLPNSFISLSNISSLYLQNNQVTGSL-NVFSG-LPLTTLNVAN 232 (720)
Q Consensus 160 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-----g~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~-~~L~~l~l~~ 232 (720)
| .|.++......|.++++|+.++|.+|.+. ...+..|.++++|+.+.|.+ .++... ..|.+ .+|+.|+|.+
T Consensus 255 l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~ 332 (401)
T 4fdw_A 255 L-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPA 332 (401)
T ss_dssp E-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECT
T ss_pred e-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECc
Confidence 6 44555555666667777777777666554 23345566667777777763 344322 23333 3466666644
Q ss_pred ccCcccCccccc--ccceeeecCCcC
Q 005001 233 NHFSGWIPRELI--SIRTFIYDGNSF 256 (720)
Q Consensus 233 N~l~g~ip~~l~--~l~~l~l~~n~~ 256 (720)
| ++..-+..|. +|+.+.+.+|..
T Consensus 333 ~-l~~I~~~aF~~~~L~~l~l~~n~~ 357 (401)
T 4fdw_A 333 N-VTQINFSAFNNTGIKEVKVEGTTP 357 (401)
T ss_dssp T-CCEECTTSSSSSCCCEEEECCSSC
T ss_pred c-ccEEcHHhCCCCCCCEEEEcCCCC
Confidence 4 4422222232 556666666643
No 412
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.35 E-value=3.3e-08 Score=94.15 Aligned_cols=109 Identities=21% Similarity=0.343 Sum_probs=86.8
Q ss_pred CCCEEEEEcCCC-CCccc----ccccccCCCCCCEEEccCCCCCCCCCCCC----C--CccceeccccccCcCC----CC
Q 005001 82 GSAVVSIDISGL-GLSGT----MGYLLSDLLSLRKFDLSGNSIHDTIPYQL----P--PNLTSLNLASNNFSGN----LP 146 (720)
Q Consensus 82 ~~~v~~l~l~~~-~l~g~----~~~~l~~l~~L~~L~L~~N~l~~~~p~~~----~--~~L~~L~L~~N~l~g~----~p 146 (720)
...++.|+|++| +|... +...+...++|++|+|++|.|+..-...+ . +.|++|+|++|.|+.. +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 457999999999 88753 45567788999999999999974322122 1 6899999999999853 46
Q ss_pred ccccccCCccEEEc--cccccccc----cccccCCCCCCCeeecCCCccc
Q 005001 147 YSIASMVSLSYLNV--SRNSLTQS----IGDIFGNLAGLATLDLSFNNFS 190 (720)
Q Consensus 147 ~~~~~l~~L~~L~L--~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 190 (720)
..+...++|++|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 67788899999999 88999865 3455666789999999999986
No 413
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.32 E-value=3.9e-06 Score=86.67 Aligned_cols=136 Identities=19% Similarity=0.153 Sum_probs=94.7
Q ss_pred cceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCC---CccccceEEe-ecCeEEEEEEec
Q 005001 415 EFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHP---NIVTLAGYCA-EHGQRLLVYEYV 490 (720)
Q Consensus 415 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~-~~~~~~lV~e~~ 490 (720)
.+.++.|....||+. |..+++|+... ......+.+|..+++.+.+. .|.+++.+.. ..+..++|||++
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i 95 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKV 95 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEecc
Confidence 446888999999988 56678887532 23456788999999888642 2556666653 455678999999
Q ss_pred CCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhc---------------------------------------
Q 005001 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV--------------------------------------- 531 (720)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~--------------------------------------- 531 (720)
+|.++.+..- ..++..+...++.++++.|+.||+.
T Consensus 96 ~G~~l~~~~~------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~ 169 (306)
T 3tdw_A 96 QGQILGEDGM------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR 169 (306)
T ss_dssp CSEECHHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred CCeECchhhh------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence 9988876321 2234555555666666666666643
Q ss_pred ------------------CCCCcEEecCCCCCEEeCC---CCc-eEEcccCCCcc
Q 005001 532 ------------------CLPSVVHRNFKSANILLDD---ELN-PHLSDCGLAAL 564 (720)
Q Consensus 532 ------------------~~~~iiH~Dlkp~NIll~~---~~~-~kl~Dfg~a~~ 564 (720)
..+.++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1235699999999999987 455 48999998754
No 414
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.26 E-value=4e-06 Score=84.82 Aligned_cols=134 Identities=16% Similarity=0.153 Sum_probs=95.7
Q ss_pred eeccCCCc-EEEEEEEc-CCcEEEEEEccccccChHHHHHHHHHHHHhhcCC-CCCccccceEEeecCeEEEEEEecCCC
Q 005001 417 LIGEGSLG-RVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHGQRLLVYEYVGNG 493 (720)
Q Consensus 417 ~lG~G~fg-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~~~g 493 (720)
.+..|..| .||+.... ++..+++|+-.. .....+.+|...++.+. +--|.++++++.+.+..++|||+++|.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-----~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~ 105 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG-----SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGK 105 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET-----HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC-----CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCc
Confidence 34556555 68988765 456788887643 23456778888877663 334678888888899999999999998
Q ss_pred CHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------------
Q 005001 494 NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC----------------------------------------- 532 (720)
Q Consensus 494 sL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~----------------------------------------- 532 (720)
++.+..... ......+..+++..|..||...
T Consensus 106 ~~~~~~~~~--------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (272)
T 4gkh_A 106 TAFQVLEEY--------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVE 177 (272)
T ss_dssp EHHHHHHHC--------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHH
T ss_pred cccccccCC--------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHH
Confidence 887765311 1223446667777777777531
Q ss_pred --------------CCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 533 --------------LPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 533 --------------~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
.+.++|+|+.+.|||++.++.+-|+||+.+.
T Consensus 178 ~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 178 QVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1237999999999999988777899999874
No 415
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.15 E-value=5.1e-06 Score=84.84 Aligned_cols=76 Identities=22% Similarity=0.288 Sum_probs=58.3
Q ss_pred ccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCC---CccccceEEeecCeEEEEEEec
Q 005001 414 QEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHP---NIVTLAGYCAEHGQRLLVYEYV 490 (720)
Q Consensus 414 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lV~e~~ 490 (720)
..+.|+.|.++.||++...+|+.+++|+..... ......+.+|++.++.+.+. .+.+++++. ..++||||+
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~--~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l 92 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDA--PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWV 92 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTC--CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCC--cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEec
Confidence 356799999999999998889999999965322 11235678899999988765 466777653 369999999
Q ss_pred CCCCH
Q 005001 491 GNGNL 495 (720)
Q Consensus 491 ~~gsL 495 (720)
+++++
T Consensus 93 ~g~~~ 97 (288)
T 3d1u_A 93 DERPP 97 (288)
T ss_dssp CCCCC
T ss_pred ccCCC
Confidence 99875
No 416
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.12 E-value=8.1e-06 Score=86.31 Aligned_cols=75 Identities=12% Similarity=0.130 Sum_probs=54.3
Q ss_pred ccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCC--ccccceEEeec-CeEEEEEEec
Q 005001 414 QEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN--IVTLAGYCAEH-GQRLLVYEYV 490 (720)
Q Consensus 414 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~-~~~~lV~e~~ 490 (720)
..+.++.|....+|+... ++..+++|..... ..+.+|..+++.+.... +.+++.++... +..++||||+
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l 116 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRA 116 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECC
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch-------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEec
Confidence 355789999999999876 5788899887532 14667777777765433 45667666554 6789999999
Q ss_pred CCCCHH
Q 005001 491 GNGNLH 496 (720)
Q Consensus 491 ~~gsL~ 496 (720)
+|.++.
T Consensus 117 ~G~~l~ 122 (362)
T 3ovc_A 117 QGVTLQ 122 (362)
T ss_dssp CSEETT
T ss_pred CCCCcc
Confidence 986653
No 417
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.96 E-value=7.3e-05 Score=78.17 Aligned_cols=141 Identities=17% Similarity=0.268 Sum_probs=77.7
Q ss_pred ceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhc-----CCCCCccccc-e--EEeecCeEEEEE
Q 005001 416 FLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR-----LRHPNIVTLA-G--YCAEHGQRLLVY 487 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~-----l~h~niv~l~-~--~~~~~~~~~lV~ 487 (720)
+.|+.|..+.||+....+| .+++|+.... . ..+..|..+++. +..|.++... | +....+..++||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~---~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~ 110 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP---E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVY 110 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC---H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC---H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEE
Confidence 4566678999999987655 5889988652 1 122223333322 2234444321 1 223467789999
Q ss_pred EecCCCCHH--------------HHhhhccCC---C-------CCCCHHHH-----------------------------
Q 005001 488 EYVGNGNLH--------------DMLHFADDS---S-------KNLTWNAR----------------------------- 514 (720)
Q Consensus 488 e~~~~gsL~--------------~~l~~~~~~---~-------~~~~~~~~----------------------------- 514 (720)
+|++|.++. ..+|..... . ....|...
T Consensus 111 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 190 (346)
T 2q83_A 111 DWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQ 190 (346)
T ss_dssp ECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred EeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHH
Confidence 999986542 112211110 0 01122210
Q ss_pred --HHHHHHHHHHHHHHHh----------cCCCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 515 --VRVALGTARALEYLHE----------VCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 515 --~~i~~qi~~~L~~LH~----------~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
..+..++..++++|+. ...+.++|+|+++.||+++.++.+.|+||+.+.
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 191 EIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 1111223445666663 013489999999999999888899999999764
No 418
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.88 E-value=7.4e-05 Score=78.75 Aligned_cols=82 Identities=7% Similarity=-0.028 Sum_probs=52.3
Q ss_pred cee-ccCCCcEEEEEEEc-------CCcEEEEEEcccccc-ChHHHHHHHHHHHHhhcCC-C--CCccccceEEeec---
Q 005001 416 FLI-GEGSLGRVYRAEFA-------NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLR-H--PNIVTLAGYCAEH--- 480 (720)
Q Consensus 416 ~~l-G~G~fg~Vy~~~~~-------~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h--~niv~l~~~~~~~--- 480 (720)
+.| +.|....+|+.... +++.+++|....... .......+.+|+.+++.+. + -.+.+++.+..+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 467 88999999998764 267788888754320 0000123456666666552 2 3466777776554
Q ss_pred CeEEEEEEecCCCCHHH
Q 005001 481 GQRLLVYEYVGNGNLHD 497 (720)
Q Consensus 481 ~~~~lV~e~~~~gsL~~ 497 (720)
+..++|||+++|.++.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 45789999999876643
No 419
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.61 E-value=7.7e-05 Score=80.59 Aligned_cols=76 Identities=9% Similarity=0.153 Sum_probs=48.4
Q ss_pred CCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccccccccc--cccccCccccccC---CCcccchhhhHHHHHHH
Q 005001 534 PSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQMVG--AFGYSAPEFALSG---IYTVKSDVYSFGVVMLE 608 (720)
Q Consensus 534 ~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~---~~~~~~DvwSlGv~l~e 608 (720)
+.++|+|+++.|||++.++ ++|+||+.+..-+...+ ... ... ...|++|+..... .-....++......+|+
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~D-la~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFD-IGA-YLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHH-HHH-HHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHH-HHH-HHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 4899999999999998876 99999998865322111 000 011 1346666655321 12234566688888888
Q ss_pred HHhC
Q 005001 609 LLTG 612 (720)
Q Consensus 609 lltg 612 (720)
.+++
T Consensus 309 ~y~~ 312 (420)
T 2pyw_A 309 LFNK 312 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 420
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.61 E-value=0.00029 Score=72.38 Aligned_cols=139 Identities=15% Similarity=0.189 Sum_probs=89.8
Q ss_pred cceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCC---CCCccccceEEeecCeEEEEEEecC
Q 005001 415 EFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR---HPNIVTLAGYCAEHGQRLLVYEYVG 491 (720)
Q Consensus 415 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lV~e~~~ 491 (720)
.+.|+.|....+|+... ++..+++|..... ....+..|+..++.+. ...+.+++.+....+..++||||++
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~ 114 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALN 114 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEecc
Confidence 45789999999999976 4677888877532 2456778887777662 3567888888887888999999999
Q ss_pred CCCHH-----------HHhhhccC-C--C---------------CCCCHHHHH---HHH----------------HHHHH
Q 005001 492 NGNLH-----------DMLHFADD-S--S---------------KNLTWNARV---RVA----------------LGTAR 523 (720)
Q Consensus 492 ~gsL~-----------~~l~~~~~-~--~---------------~~~~~~~~~---~i~----------------~qi~~ 523 (720)
+..+. ..+|.... . + ..-+|.... ++. ..++.
T Consensus 115 G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~ 194 (312)
T 3jr1_A 115 KSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQ 194 (312)
T ss_dssp CCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHH
T ss_pred CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 87652 12232211 0 0 012344321 111 11111
Q ss_pred H-HHHHHh-cCCCCcEEecCCCCCEEeCCCCceEEcccC
Q 005001 524 A-LEYLHE-VCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (720)
Q Consensus 524 ~-L~~LH~-~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg 560 (720)
. ...|.. ...|.++|+|+.+.|++++.++ +.|+|+.
T Consensus 195 ~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 195 IVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1 123321 1246899999999999999887 8899974
No 421
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.53 E-value=1.4e-05 Score=74.28 Aligned_cols=85 Identities=6% Similarity=0.111 Sum_probs=54.3
Q ss_pred ccceeccccccCcCCCCccccccCCccEEEccccc-cccccccccCCC----CCCCeeecCCCc-ccCCCCccccCCCCC
Q 005001 130 NLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNS-LTQSIGDIFGNL----AGLATLDLSFNN-FSGDLPNSFISLSNI 203 (720)
Q Consensus 130 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~l~~N~-l~g~~p~~~~~l~~L 203 (720)
+|+.|||+++.++..--..+.+|++|+.|+|+++. ++..--..++.+ ++|++|+|+++. ++...-..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555554434456678888888888874 665444445554 368888887763 665444456777888
Q ss_pred CeeEecccc-cc
Q 005001 204 SSLYLQNNQ-VT 214 (720)
Q Consensus 204 ~~L~l~~N~-l~ 214 (720)
++|+|+++. |+
T Consensus 142 ~~L~L~~c~~It 153 (176)
T 3e4g_A 142 KYLFLSDLPGVK 153 (176)
T ss_dssp CEEEEESCTTCC
T ss_pred CEEECCCCCCCC
Confidence 888887764 44
No 422
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.53 E-value=0.00029 Score=71.79 Aligned_cols=77 Identities=22% Similarity=0.309 Sum_probs=52.9
Q ss_pred CccceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCC---CCccccceEEeecCeEEEEEEe
Q 005001 413 SQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH---PNIVTLAGYCAEHGQRLLVYEY 489 (720)
Q Consensus 413 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~niv~l~~~~~~~~~~~lV~e~ 489 (720)
...+.+|.|..+.||+.+..+|+.|++|+....... ....|..|+..|+.+.- --+.+++++ +..++||||
T Consensus 18 ~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~--~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~ 91 (288)
T 3f7w_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPA--LDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEW 91 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCC--CTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEEC
T ss_pred EEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcc--hhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEe
Confidence 345679999999999999999999999987543321 23346678877776632 123444443 234789999
Q ss_pred cCCCCH
Q 005001 490 VGNGNL 495 (720)
Q Consensus 490 ~~~gsL 495 (720)
++++..
T Consensus 92 l~~~~~ 97 (288)
T 3f7w_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred ecccCC
Confidence 987653
No 423
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.49 E-value=0.00034 Score=74.87 Aligned_cols=77 Identities=17% Similarity=0.110 Sum_probs=46.9
Q ss_pred cceeccCCCcEEEEEEEc-CCcEEEEEEcccccc--Ch---HHHHHHHHHHHHhhcCCC--CC-ccccceEEeecCeEEE
Q 005001 415 EFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL--SL---QEEDNFLEAVSNMSRLRH--PN-IVTLAGYCAEHGQRLL 485 (720)
Q Consensus 415 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~---~~~~~~~~e~~~l~~l~h--~n-iv~l~~~~~~~~~~~l 485 (720)
.+.||.|.++.||++... +++.+++|....... .. .....+..|.++++.+.. +. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 457999999999999654 467899997653211 00 112345667777766532 33 3344443 3455689
Q ss_pred EEEecCCC
Q 005001 486 VYEYVGNG 493 (720)
Q Consensus 486 V~e~~~~g 493 (720)
|||++++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 424
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.47 E-value=6.5e-06 Score=77.98 Aligned_cols=88 Identities=18% Similarity=0.146 Sum_probs=40.4
Q ss_pred ccccccCCCCCCEEEccCC-CCCCCCC----CCC--CCccceeccccccCcCC----CCccccccCCccEEEcccccccc
Q 005001 99 MGYLLSDLLSLRKFDLSGN-SIHDTIP----YQL--PPNLTSLNLASNNFSGN----LPYSIASMVSLSYLNVSRNSLTQ 167 (720)
Q Consensus 99 ~~~~l~~l~~L~~L~L~~N-~l~~~~p----~~~--~~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~~ 167 (720)
+...+.+-+.|++|+|++| .|...-- ..+ -..|+.|+|++|+|... +...+..-+.|+.|+|++|.|+.
T Consensus 33 l~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 33 INRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP 112 (197)
T ss_dssp HHHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred HHHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCH
Confidence 3344555666777777764 5542110 001 13555555555555522 22223333455555555555553
Q ss_pred c----cccccCCCCCCCeeecCC
Q 005001 168 S----IGDIFGNLAGLATLDLSF 186 (720)
Q Consensus 168 ~----~p~~~~~l~~L~~L~l~~ 186 (720)
. +-+.+..-+.|+.|+|++
T Consensus 113 ~Ga~ala~aL~~N~tL~~L~L~n 135 (197)
T 1pgv_A 113 ELLARLLRSTLVTQSIVEFKADN 135 (197)
T ss_dssp HHHHHHHHHTTTTCCCSEEECCC
T ss_pred HHHHHHHHHHhhCCceeEEECCC
Confidence 2 122333334455555543
No 425
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.33 E-value=0.00028 Score=62.31 Aligned_cols=56 Identities=20% Similarity=0.310 Sum_probs=40.1
Q ss_pred EEEccCCCCC-CCCCCCCCCccceeccccccCcCCCCccccccCCccEEEccccccc
Q 005001 111 KFDLSGNSIH-DTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLT 166 (720)
Q Consensus 111 ~L~L~~N~l~-~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 166 (720)
.++.+++.++ ..+|..+.++|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFPVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCCTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCCcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4566666665 4667677778888888888888555566777788888888777664
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.21 E-value=6.4e-05 Score=69.76 Aligned_cols=37 Identities=16% Similarity=0.098 Sum_probs=27.5
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEEccCCC-CC
Q 005001 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNS-IH 120 (720)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~-l~ 120 (720)
+++.|||+++.++..--..+..+++|++|+|+++. |+
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~It 99 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIE 99 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccC
Confidence 68888888888776555567778888888888774 55
No 427
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.13 E-value=6e-05 Score=71.34 Aligned_cols=110 Identities=19% Similarity=0.257 Sum_probs=79.2
Q ss_pred cCCCEEEEEcCCC-CCcc----cccccccCCCCCCEEEccCCCCCCCCCCCCC------CccceeccccccCcCC----C
Q 005001 81 EGSAVVSIDISGL-GLSG----TMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP------PNLTSLNLASNNFSGN----L 145 (720)
Q Consensus 81 ~~~~v~~l~l~~~-~l~g----~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~------~~L~~L~L~~N~l~g~----~ 145 (720)
.+..++.|+|++| +|.. .+...|..-+.|+.|+|++|.|+..--..+. +.|+.|+|+.|.|+.. +
T Consensus 39 ~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~al 118 (197)
T 1pgv_A 39 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 118 (197)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred cCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHH
Confidence 3567999999986 7754 3456778889999999999999844333332 6899999999999843 3
Q ss_pred CccccccCCccEEEcccc---ccccc----cccccCCCCCCCeeecCCCccc
Q 005001 146 PYSIASMVSLSYLNVSRN---SLTQS----IGDIFGNLAGLATLDLSFNNFS 190 (720)
Q Consensus 146 p~~~~~l~~L~~L~L~~N---~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 190 (720)
-+.+..-+.|++|+|++| .+... +...+..-+.|+.|+|+.|.+.
T Consensus 119 a~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 119 LRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 345555678999999876 34422 3344555577888888777653
No 428
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.10 E-value=0.0013 Score=70.28 Aligned_cols=132 Identities=13% Similarity=0.193 Sum_probs=66.5
Q ss_pred cccccCCCCCCEEEccCCCCC-CCCCCCCCCccceeccccccCcCCCCccccccCCccEEEccccccccccccccCCCCC
Q 005001 100 GYLLSDLLSLRKFDLSGNSIH-DTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAG 178 (720)
Q Consensus 100 ~~~l~~l~~L~~L~L~~N~l~-~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 178 (720)
..+|.+++.|+.+.+..+..+ |.--+.-.++|+.+.+. +.++..-...|.+|.+|+.++|..| ++..-..+|.++++
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~ 335 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQ 335 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTT
T ss_pred cceeeecccccEEecccccceecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCC
Confidence 345666777777776554332 11111112566666664 3444333456667777777777643 55444556777777
Q ss_pred CCeeecCCCcccCCCCccccCCCCCCeeEeccccccccccccCCCCcCeEEccCccC
Q 005001 179 LATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHF 235 (720)
Q Consensus 179 L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l 235 (720)
|+.+.|..+ ++..-...|.++++|+.+++.+|..... ..+....|+.|.+..|.+
T Consensus 336 L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~~-~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 336 LERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQWN-AISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp CCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHHH-TCBCCCCC----------
T ss_pred CCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeehh-hhhccCCCCEEEeCCCCE
Confidence 777777543 5533345566777777777766654321 112223455555554443
No 429
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.01 E-value=0.0018 Score=66.29 Aligned_cols=71 Identities=11% Similarity=0.126 Sum_probs=40.9
Q ss_pred cceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCc-cccceEEeecCeEEEEEEec-CC
Q 005001 415 EFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNI-VTLAGYCAEHGQRLLVYEYV-GN 492 (720)
Q Consensus 415 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~e~~-~~ 492 (720)
.+.|+.|....+|+. +.+++|+........ ....+|+..++.+....+ .+++++ ..+.-++|+||+ +|
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~---~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g 92 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY---INRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGA 92 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----C---CCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTC
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccce---eCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCC
Confidence 567999999999998 557888776431110 112345555544422222 344443 333457899999 66
Q ss_pred CCH
Q 005001 493 GNL 495 (720)
Q Consensus 493 gsL 495 (720)
.++
T Consensus 93 ~~l 95 (301)
T 3dxq_A 93 QTM 95 (301)
T ss_dssp EEC
T ss_pred ccC
Confidence 544
No 430
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.98 E-value=0.014 Score=60.11 Aligned_cols=143 Identities=15% Similarity=0.196 Sum_probs=75.6
Q ss_pred ceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcC-----CCCCccccc-e--EEeecCeEEEEE
Q 005001 416 FLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-----RHPNIVTLA-G--YCAEHGQRLLVY 487 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~l~-~--~~~~~~~~~lV~ 487 (720)
+.|+.|....+|+....+| .+++|...... . ...+..|+.++..+ .-|.++... | +....+..++++
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~-~---~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~ 102 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRV-E---KNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALI 102 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC-------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEE
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCCC-C---HHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEE
Confidence 4577788899999987666 57788876421 1 12233444444433 223333211 1 122346779999
Q ss_pred EecCCCCHHH--------------HhhhccCC--CC---CC---CHHHHHH------------HHHHHHHHHHHHHhc--
Q 005001 488 EYVGNGNLHD--------------MLHFADDS--SK---NL---TWNARVR------------VALGTARALEYLHEV-- 531 (720)
Q Consensus 488 e~~~~gsL~~--------------~l~~~~~~--~~---~~---~~~~~~~------------i~~qi~~~L~~LH~~-- 531 (720)
+|++|..+.. .+|..... .. .. .|..... +...+...++.++..
T Consensus 103 ~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~ 182 (322)
T 2ppq_A 103 SFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWP 182 (322)
T ss_dssp ECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCC
T ss_pred EeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCc
Confidence 9999865321 12211000 00 01 1221100 001134455566532
Q ss_pred --CCCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 532 --CLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 532 --~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
..++++|+|+.+.||+++.++.+.|+||+.+.
T Consensus 183 ~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 183 KDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp CSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred ccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 12378999999999999987666899999764
No 431
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.91 E-value=0.008 Score=62.08 Aligned_cols=143 Identities=17% Similarity=0.203 Sum_probs=79.2
Q ss_pred ceeccCCCcEEEEEEEcCCcEEEEEEccccccChHHHHHHHHHHHHhhcCCC--CCccccceE-----EeecCeEEEEEE
Q 005001 416 FLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH--PNIVTLAGY-----CAEHGQRLLVYE 488 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~-----~~~~~~~~lV~e 488 (720)
..++ |....||+....+|+.+++|........ ...+..|..+++.+.. -.+++++.. ....+..++||+
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~---~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~ 107 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERWT---ADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFP 107 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTTSC---HHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCCCC---HHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEE
Confidence 3566 8889999998777878999998643222 2344456555554421 123444432 223566789999
Q ss_pred ecCCCCHH-----HH---------hhhccCC-----CCCCCHHHH----HHH---------------HHHHHHHHHHHHh
Q 005001 489 YVGNGNLH-----DM---------LHFADDS-----SKNLTWNAR----VRV---------------ALGTARALEYLHE 530 (720)
Q Consensus 489 ~~~~gsL~-----~~---------l~~~~~~-----~~~~~~~~~----~~i---------------~~qi~~~L~~LH~ 530 (720)
+++|..+. .. +|..... ....++... ..+ ...+...++.+..
T Consensus 108 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (328)
T 1zyl_A 108 SVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTA 187 (328)
T ss_dssp CCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 99875432 11 1111100 111222111 001 1111122333332
Q ss_pred c----CCCCcEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 531 V----CLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 531 ~----~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
. ..+.++|+|+++.||+++ + .+.|+||+.+..
T Consensus 188 ~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 188 HWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp HCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1 123679999999999999 4 899999998754
No 432
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.89 E-value=0.0038 Score=64.74 Aligned_cols=32 Identities=31% Similarity=0.314 Sum_probs=27.5
Q ss_pred CCcEEecCCCCCEEeCCC----CceEEcccCCCccC
Q 005001 534 PSVVHRNFKSANILLDDE----LNPHLSDCGLAALT 565 (720)
Q Consensus 534 ~~iiH~Dlkp~NIll~~~----~~~kl~Dfg~a~~~ 565 (720)
+.++|+|+.+.|||++.+ +.+.|+||+.+..-
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 478999999999999875 68999999988643
No 433
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.76 E-value=0.0068 Score=57.57 Aligned_cols=102 Identities=14% Similarity=0.076 Sum_probs=66.5
Q ss_pred CCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCccCCCCCccc
Q 005001 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (720)
Q Consensus 493 gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 572 (720)
-+|.+.|+. .+.++++++++.++.|.+.+|.-+-.... . ..+=+.|..|++..+|.+.+.+ +.+.
T Consensus 33 vSL~eIL~~---~~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~--------- 97 (229)
T 2yle_A 33 LSLEEILRL---YNQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD--------- 97 (229)
T ss_dssp EEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred ccHHHHHHH---cCCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc---------
Confidence 378888874 36899999999999999999877632111 1 1233457899999999988764 1110
Q ss_pred cccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCC
Q 005001 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRK 614 (720)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~ 614 (720)
.....+.|||... ...+.+.-|||||+++|.-+--..
T Consensus 98 ----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL 134 (229)
T 2yle_A 98 ----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGL 134 (229)
T ss_dssp -------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTC
T ss_pred ----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCC
Confidence 1122467888764 345678899999999998886333
No 434
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.73 E-value=0.0019 Score=56.92 Aligned_cols=56 Identities=23% Similarity=0.262 Sum_probs=36.1
Q ss_pred EEEccccccc-cccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEecccccc
Q 005001 157 YLNVSRNSLT-QSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVT 214 (720)
Q Consensus 157 ~L~L~~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 214 (720)
.++.+++.|+ ..+|..+. .+|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5666666665 34454332 35777788888877544455667777777777777664
No 435
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.63 E-value=0.0066 Score=64.61 Aligned_cols=157 Identities=13% Similarity=0.152 Sum_probs=102.7
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCC-CCCCCCCCCccceeccccccCcCCCCccccccCCccEEEccc
Q 005001 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIH-DTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (720)
Q Consensus 84 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~-~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~ 162 (720)
.++.+.+.+. +...-...+..+..|+.+.+..+..+ +.........|+.+.+..+.+. ...+..+.+|+.+.+.+
T Consensus 231 ~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~ 306 (394)
T 4fs7_A 231 GVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLD 306 (394)
T ss_dssp CCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECT
T ss_pred CCceEEECCC-ceecccccccccccceeEEcCCCcceeeccccccccccceeccCceeec---ccccccccccccccccc
Confidence 4666666543 33344557888999999999877543 1111222267777776665432 34677889999999876
Q ss_pred cccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccc-cccCC-CCcCeEEccCccCcccCc
Q 005001 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSL-NVFSG-LPLTTLNVANNHFSGWIP 240 (720)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~-~~L~~l~l~~N~l~g~ip 240 (720)
+ ++..-..+|.++++|+.++|.++ ++..-...|.++++|+.+.|..| ++..- ..|.+ .+|+.+++..| ++ .+.
T Consensus 307 ~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~ 381 (394)
T 4fs7_A 307 S-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYR 381 (394)
T ss_dssp T-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGG
T ss_pred c-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-Ehh
Confidence 5 66555678888999999999754 66444667888999999999876 55422 34444 56899988755 22 234
Q ss_pred cccccccee
Q 005001 241 RELISIRTF 249 (720)
Q Consensus 241 ~~l~~l~~l 249 (720)
..|.+.+.|
T Consensus 382 ~~F~~c~~L 390 (394)
T 4fs7_A 382 YDFEDTTKF 390 (394)
T ss_dssp GGBCTTCEE
T ss_pred heecCCCCC
Confidence 455555444
No 436
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.47 E-value=0.008 Score=63.34 Aligned_cols=142 Identities=15% Similarity=0.160 Sum_probs=80.6
Q ss_pred cceeccCCCcEEEEEEEc--------CCcEEEEEEccccccChHHHHHHHHHHHHhhcCC-CCCccccceEEeecCeEEE
Q 005001 415 EFLIGEGSLGRVYRAEFA--------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 415 ~~~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~l 485 (720)
.+.|..|-...+|++... +++.|++|+..... .....+.+|..+++.+. +.-..++++++.+ .+
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~---~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~ 127 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL---QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GR 127 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc---chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----cc
Confidence 346777889999999875 25789999874321 12345567888877663 2223556665543 29
Q ss_pred EEEecCCCCHHHH-----------------hhhccCC-CCCCC--HHHHHHHHHHHHH-------------------HHH
Q 005001 486 VYEYVGNGNLHDM-----------------LHFADDS-SKNLT--WNARVRVALGTAR-------------------ALE 526 (720)
Q Consensus 486 V~e~~~~gsL~~~-----------------l~~~~~~-~~~~~--~~~~~~i~~qi~~-------------------~L~ 526 (720)
||||++|.+|..- +|..... ..... +.++.++..++.. .+.
T Consensus 128 v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 207 (379)
T 3feg_A 128 LEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMG 207 (379)
T ss_dssp EEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHH
T ss_pred EEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHH
Confidence 9999998655310 1111111 11222 3444545444321 223
Q ss_pred HHHh----c-CCCCcEEecCCCCCEEeCCC----CceEEcccCCCc
Q 005001 527 YLHE----V-CLPSVVHRNFKSANILLDDE----LNPHLSDCGLAA 563 (720)
Q Consensus 527 ~LH~----~-~~~~iiH~Dlkp~NIll~~~----~~~kl~Dfg~a~ 563 (720)
.|.+ . ....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 208 ~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 208 NLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 3322 1 12368999999999999876 789999999874
No 437
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.46 E-value=0.013 Score=62.31 Aligned_cols=124 Identities=15% Similarity=0.148 Sum_probs=62.8
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCC-C--CCccceeccccccCcCCC--------------
Q 005001 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQ-L--PPNLTSLNLASNNFSGNL-------------- 145 (720)
Q Consensus 83 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~-~--~~~L~~L~L~~N~l~g~~-------------- 145 (720)
..++.++|.+ +++..-..+|.++++|+.++|..| ++ .|+.. + ..+|+.+.+..+ +...-
T Consensus 71 ~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~~~~~ 146 (394)
T 4fs7_A 71 RKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VK-MIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFKEITI 146 (394)
T ss_dssp TTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCSEEEC
T ss_pred CCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ce-EccchhhcccccchhhcccCc-eeeecceeeeccccccccc
Confidence 3678888864 466555667888888888888654 43 22221 1 145555554433 11111
Q ss_pred --------CccccccCCccEEEccccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEecccc
Q 005001 146 --------PYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQ 212 (720)
Q Consensus 146 --------p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~ 212 (720)
...|.++++|+.+.|.++. .......|.++.+|+.+++..| ++......|.++..|+.+.+.++.
T Consensus 147 ~~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~ 219 (394)
T 4fs7_A 147 PEGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSL 219 (394)
T ss_dssp CTTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTC
T ss_pred CccccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCc
Confidence 1234455555555554332 2233344555555555555444 332223344455555555554443
No 438
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.46 E-value=0.0088 Score=63.19 Aligned_cols=128 Identities=15% Similarity=0.188 Sum_probs=72.2
Q ss_pred cccccCCCCCCEEEccCCCCCCCCC-CCC--CCccceeccccccCcCCCCccccccCCccEEEccccccccccccccCCC
Q 005001 100 GYLLSDLLSLRKFDLSGNSIHDTIP-YQL--PPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNL 176 (720)
Q Consensus 100 ~~~l~~l~~L~~L~L~~N~l~~~~p-~~~--~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 176 (720)
...+...+.|+.+.+..+ ++ .+. ..+ ...|+.+.+..+ ++..-...+.++.+|+.+.+..+ ++......|.++
T Consensus 210 ~~~f~~~~~l~~i~~~~~-~~-~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c 285 (379)
T 4h09_A 210 AYGFSYGKNLKKITITSG-VT-TLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGC 285 (379)
T ss_dssp TTTTTTCSSCSEEECCTT-CC-EECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTC
T ss_pred ecccccccccceeeeccc-ee-EEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccc
Confidence 345566677777776544 22 122 111 256777776654 44333456667777777777543 444445566777
Q ss_pred CCCCeeecCCCcccCCCCccccCCCCCCeeEeccccccccc-cccCC-CCcCeEEccC
Q 005001 177 AGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSL-NVFSG-LPLTTLNVAN 232 (720)
Q Consensus 177 ~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~-~~L~~l~l~~ 232 (720)
++|+.+.+.+|.++..-...|.++.+|+.+.|.+| ++..- ..|.. .+|+.+.+..
T Consensus 286 ~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 286 SNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp TTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCT
T ss_pred cccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECC
Confidence 77777777777666444456677777777777644 33221 22333 3466665543
No 439
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.45 E-value=0.005 Score=66.35 Aligned_cols=73 Identities=14% Similarity=0.152 Sum_probs=47.6
Q ss_pred cceeccCCCcEEEEEEEcC--------CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCc-cccceEEeecCeEEE
Q 005001 415 EFLIGEGSLGRVYRAEFAN--------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNI-VTLAGYCAEHGQRLL 485 (720)
Q Consensus 415 ~~~lG~G~fg~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~l 485 (720)
.+.|+.|....||++...+ ++.+++|+..... . ...+.+|..+++.+...++ .++++.+.+ .+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~-~---~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~ 149 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE-T---ESHLVAESVIFTLLSERHLGPKLYGIFSG----GR 149 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC-C---HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC-c---HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CE
Confidence 4568889999999998753 5788899884321 1 1344567777776633333 556665432 38
Q ss_pred EEEecCCCCH
Q 005001 486 VYEYVGNGNL 495 (720)
Q Consensus 486 V~e~~~~gsL 495 (720)
|+||++|.+|
T Consensus 150 v~e~l~G~~l 159 (429)
T 1nw1_A 150 LEEYIPSRPL 159 (429)
T ss_dssp EECCCCEEEC
T ss_pred EEEEeCCccc
Confidence 9999986444
No 440
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.37 E-value=0.013 Score=60.99 Aligned_cols=31 Identities=19% Similarity=0.285 Sum_probs=27.5
Q ss_pred CCcEEecCCCCCEEeCCCCceEEcccCCCcc
Q 005001 534 PSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (720)
Q Consensus 534 ~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 564 (720)
..++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 3789999999999999888899999987754
No 441
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.26 E-value=0.013 Score=63.36 Aligned_cols=74 Identities=11% Similarity=0.007 Sum_probs=45.6
Q ss_pred cceeccCCCcEEEEEEEcC-CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCCc-cccceEEeecCeEEEEEEecCC
Q 005001 415 EFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNI-VTLAGYCAEHGQRLLVYEYVGN 492 (720)
Q Consensus 415 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~e~~~~ 492 (720)
.+.|+.|-...+|++...+ +..+++|+........ ....+|..+++.+...++ .++++.+. + .+|+||++|
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~---idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G 185 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI---INREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDG 185 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC---SCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCS
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh---cCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCC
Confidence 4568889999999998865 5788888875322111 111367777776654444 45666653 2 359999987
Q ss_pred CCH
Q 005001 493 GNL 495 (720)
Q Consensus 493 gsL 495 (720)
.+|
T Consensus 186 ~~l 188 (458)
T 2qg7_A 186 YAL 188 (458)
T ss_dssp EEC
T ss_pred ccC
Confidence 544
No 442
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.15 E-value=0.0085 Score=63.75 Aligned_cols=122 Identities=15% Similarity=0.200 Sum_probs=81.7
Q ss_pred EEEEEcCCCCCcccccccccCCCCCCEEEccCCCCCCCCCCC-CC--CccceeccccccCcCCCCccccccCCccEEEcc
Q 005001 85 VVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQ-LP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (720)
Q Consensus 85 v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~-~~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~ 161 (720)
++.+.+.++- ...-..+|.+++.|+.+.+. +.++ .|+.. +. .+|+.++|..| ++..-...|.+|.+|+.+.|.
T Consensus 267 L~~i~lp~~~-~~I~~~aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip 342 (394)
T 4gt6_A 267 LASVKMPDSV-VSIGTGAFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIP 342 (394)
T ss_dssp CCEEECCTTC-CEECTTTTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEC
T ss_pred ccEEeccccc-ceecCcccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEEC
Confidence 4455554432 23345678899999999996 4555 34433 32 78999999865 664446789999999999997
Q ss_pred ccccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEecccccc
Q 005001 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVT 214 (720)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 214 (720)
.+ ++..-..+|.++++|+.+++.+|.... ..+....+|+.+.+..|.+.
T Consensus 343 ~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 343 SS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSID 391 (394)
T ss_dssp TT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC-----------
T ss_pred cc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCEE
Confidence 55 776667899999999999999987652 45777889999998877653
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.01 E-value=0.019 Score=60.39 Aligned_cols=73 Identities=8% Similarity=0.008 Sum_probs=40.5
Q ss_pred ceeccCCCcEEEEEEEcC---------CcEEEEEEccccccChHHHHHHHHHHHHhhcCCCCC-ccccceEEeecCeEEE
Q 005001 416 FLIGEGSLGRVYRAEFAN---------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN-IVTLAGYCAEHGQRLL 485 (720)
Q Consensus 416 ~~lG~G~fg~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~l 485 (720)
+.|+.|....+|+....+ +..+++|+....... ......|..+++.+...+ +.++++.. . -++
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~---~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~ 111 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE---LYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGR 111 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG---TSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc---eecHHHHHHHHHHHHhcCCCCceEEec--C--CcE
Confidence 467788899999998754 267888887543211 111235555555553222 34555443 2 368
Q ss_pred EEEecCCCCH
Q 005001 486 VYEYVGNGNL 495 (720)
Q Consensus 486 V~e~~~~gsL 495 (720)
||||++|.++
T Consensus 112 v~e~i~G~~l 121 (369)
T 3c5i_A 112 IEEWLYGDPL 121 (369)
T ss_dssp EEECCCSEEC
T ss_pred EEEEecCCcC
Confidence 9999987543
No 444
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=95.38 E-value=0.076 Score=55.86 Aligned_cols=131 Identities=14% Similarity=0.153 Sum_probs=79.5
Q ss_pred cccCCCCCCEEEccCCCCC-CCCCCCCCCccceeccccccCcCCCCccccccCCccEEEccccccccccccccCCCCCCC
Q 005001 102 LLSDLLSLRKFDLSGNSIH-DTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLA 180 (720)
Q Consensus 102 ~l~~l~~L~~L~L~~N~l~-~~~p~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 180 (720)
.+.....+..+.+..+.-. +........+|+.+.+..+ +.......+.++.+|+.+.+..+ ++..-...|.++.+|+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~ 266 (379)
T 4h09_A 189 SYPAAKTGTEFTIPSTVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALK 266 (379)
T ss_dssp ECCTTCCCSEEECCTTCCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCC
T ss_pred cccccccccccccccceeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhc
Confidence 3444555555554433221 1111222266777777554 33244556778888888888765 5555566777888888
Q ss_pred eeecCCCcccCCCCccccCCCCCCeeEecccccccccc-ccCC-CCcCeEEccCccCc
Q 005001 181 TLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLN-VFSG-LPLTTLNVANNHFS 236 (720)
Q Consensus 181 ~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~-~~L~~l~l~~N~l~ 236 (720)
.+.+..+ +.......|.++++|+.+.+.+|.++.... .|.. .+|+.+.|..| ++
T Consensus 267 ~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~ 322 (379)
T 4h09_A 267 TLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK 322 (379)
T ss_dssp EEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC
T ss_pred ccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-cc
Confidence 8888654 543444567788888888888887765332 3333 45888887654 44
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.32 E-value=0.028 Score=59.53 Aligned_cols=145 Identities=12% Similarity=0.105 Sum_probs=80.6
Q ss_pred cceeccCCCcEEEEEEEcC--------CcEEEEEEccccccC------------hH----HHHHHHHHHHHhhcCC-CCC
Q 005001 415 EFLIGEGSLGRVYRAEFAN--------GKIMAVKKIDNAALS------------LQ----EEDNFLEAVSNMSRLR-HPN 469 (720)
Q Consensus 415 ~~~lG~G~fg~Vy~~~~~~--------~~~vavK~~~~~~~~------------~~----~~~~~~~e~~~l~~l~-h~n 469 (720)
.+.|..|-...+|++...+ +..|.+++....... .+ ....+..|..+++.+. +.-
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 3456678889999997754 367888877542110 00 0112334777776663 333
Q ss_pred ccccceEEeecCeEEEEEEecCCCCHHH--H---------------hhhccC-CCCCCC--HHHHHHHHHHHH-------
Q 005001 470 IVTLAGYCAEHGQRLLVYEYVGNGNLHD--M---------------LHFADD-SSKNLT--WNARVRVALGTA------- 522 (720)
Q Consensus 470 iv~l~~~~~~~~~~~lV~e~~~~gsL~~--~---------------l~~~~~-~~~~~~--~~~~~~i~~qi~------- 522 (720)
..++++++.. .+|+||++|.+|.. + +|.... ...... +....++..++.
T Consensus 137 ~Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~ 212 (401)
T 3f2s_A 137 GPKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE 212 (401)
T ss_dssp SCCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred CCeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence 5567776642 28999999755521 1 111100 111222 223333333221
Q ss_pred ---------------HHH----HHHHhc-CCCCcEEecCCCCCEEeCCC------CceEEcccCCCc
Q 005001 523 ---------------RAL----EYLHEV-CLPSVVHRNFKSANILLDDE------LNPHLSDCGLAA 563 (720)
Q Consensus 523 ---------------~~L----~~LH~~-~~~~iiH~Dlkp~NIll~~~------~~~kl~Dfg~a~ 563 (720)
.-+ .+|... ....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 222222 12367999999999999876 789999999874
No 446
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=95.03 E-value=0.033 Score=37.86 Aligned_cols=30 Identities=20% Similarity=0.360 Sum_probs=17.2
Q ss_pred eehhHHHHHHHHHHHHHHHHHHHhhccccc
Q 005001 304 AIVGIVLGAVFLVALALLALYFCIRKNRRK 333 (720)
Q Consensus 304 ~i~~~~~~~~~~i~~~l~~~~~~~~~~~~~ 333 (720)
.|++.++|+++++++++++.++++|||+.+
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred eEEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 456666665555555555556666655544
No 447
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=94.94 E-value=0.024 Score=37.35 Aligned_cols=30 Identities=37% Similarity=0.551 Sum_probs=20.5
Q ss_pred CCCceehhHHHHHHHHHHHHHHHHHHHhhc
Q 005001 300 LPAGAIVGIVLGAVFLVALALLALYFCIRK 329 (720)
Q Consensus 300 ~~~~~i~~~~~~~~~~i~~~l~~~~~~~~~ 329 (720)
...+.|+|+++|.++.+++++.+.++++||
T Consensus 8 ls~GaIAGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 8 LTGGEIVAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCceeeeehHHHHHHHHHHHHHHHHeec
Confidence 346688888888887776666555555554
No 448
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=94.84 E-value=0.046 Score=37.08 Aligned_cols=32 Identities=22% Similarity=0.384 Sum_probs=18.6
Q ss_pred ceehhHHHHHHHHHHHHHHHHHHHhhcccccc
Q 005001 303 GAIVGIVLGAVFLVALALLALYFCIRKNRRKV 334 (720)
Q Consensus 303 ~~i~~~~~~~~~~i~~~l~~~~~~~~~~~~~~ 334 (720)
..|++.++|++++++++++..++++|||++++
T Consensus 10 ~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 10 PLIAAGVIGGLFILVIVGLTFAVYVRRKSIKK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred ceEEEeehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 35666666666665555555566666655443
No 449
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.48 E-value=0.38 Score=51.20 Aligned_cols=74 Identities=8% Similarity=-0.038 Sum_probs=45.2
Q ss_pred cceeccCCCcEEEEEEEcC--------CcEEEEEEccccccChHHHHHHHHHHHHhhcCC-CCCccccceEEeecCeEEE
Q 005001 415 EFLIGEGSLGRVYRAEFAN--------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHGQRLL 485 (720)
Q Consensus 415 ~~~lG~G~fg~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~l 485 (720)
.+.+..|-...+|+....+ ++.|++|+....... .....+|..+++.+. +.-..++++.+ . -++
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~---~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~ 147 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK---FYDSKVELDVFRYLSNINIAPNIIADF--P--EGR 147 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C---CCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch---hcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCE
Confidence 3467778899999998763 578899887543211 111235555555552 22234555433 2 278
Q ss_pred EEEecCCCCH
Q 005001 486 VYEYVGNGNL 495 (720)
Q Consensus 486 V~e~~~~gsL 495 (720)
|+||++|.+|
T Consensus 148 I~efI~G~~l 157 (424)
T 3mes_A 148 IEEFIDGEPL 157 (424)
T ss_dssp EEECCCSEEC
T ss_pred EEEEeCCccC
Confidence 9999998664
No 450
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=93.07 E-value=0.11 Score=35.22 Aligned_cols=29 Identities=21% Similarity=0.454 Sum_probs=14.8
Q ss_pred ceehhHHHHHHHHHHHHHHHHHHHhhcccc
Q 005001 303 GAIVGIVLGAVFLVALALLALYFCIRKNRR 332 (720)
Q Consensus 303 ~~i~~~~~~~~~~i~~~l~~~~~~~~~~~~ 332 (720)
..+++.++| +++++++.+...+++|||+.
T Consensus 12 ~~Ia~~vVG-vll~vi~~l~~~~~~RRR~~ 40 (44)
T 2jwa_A 12 TSIISAVVG-ILLVVVLGVVFGILIKRRQQ 40 (44)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHHHHHHCS
T ss_pred cchHHHHHH-HHHHHHHHHHHHhheehhhh
Confidence 356777777 44444444444444444443
No 451
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=88.52 E-value=1 Score=47.64 Aligned_cols=28 Identities=25% Similarity=0.398 Sum_probs=24.2
Q ss_pred cEEecCCCCCEEe------CCCCceEEcccCCCc
Q 005001 536 VVHRNFKSANILL------DDELNPHLSDCGLAA 563 (720)
Q Consensus 536 iiH~Dlkp~NIll------~~~~~~kl~Dfg~a~ 563 (720)
++|+|+.+.|||+ +++..++++||..|.
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 5799999999999 456779999999875
No 452
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=84.11 E-value=1.9 Score=41.00 Aligned_cols=115 Identities=14% Similarity=0.143 Sum_probs=77.8
Q ss_pred CCCCccccceEEeecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHH-HHHhcCCCCcEEecCCCC
Q 005001 466 RHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALE-YLHEVCLPSVVHRNFKSA 544 (720)
Q Consensus 466 ~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~-~LH~~~~~~iiH~Dlkp~ 544 (720)
.||++ -..+-.+++...+.++.-+++.=...+ ...+..++++++.+|+.... ++++. +|--+.|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i-------~~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI-------RKTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH-------HTSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH-------HhcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCc
Confidence 67887 444556677777777765332222222 45678899999999888777 66655 88899999
Q ss_pred CEEeCCCCceEEcccCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCC
Q 005001 545 NILLDDELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (720)
Q Consensus 545 NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~ 617 (720)
|++++.++.++|.-.|+-..+ +|.-+ +..-=+-.+=+++..++.++..|+
T Consensus 114 NL~f~~~~~p~i~hRGi~~~l------------------pP~e~-----~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKESL------------------PPDEW-----DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GEEECTTCCEEESCCEETTTB------------------SSCSC-----CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred eEEEeCCCcEEEEEcCCcccC------------------CCCCC-----CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999999887764333 22211 111113356678888888888774
No 453
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=82.76 E-value=0.18 Score=54.50 Aligned_cols=62 Identities=6% Similarity=0.030 Sum_probs=17.0
Q ss_pred cceeccCCCcEEEEEEEcC-CcEEEE------EEccccccChHHHHHHHHHHHHhhcCCCCCccccceEEee
Q 005001 415 EFLIGEGSLGRVYRAEFAN-GKIMAV------KKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE 479 (720)
Q Consensus 415 ~~~lG~G~fg~Vy~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 479 (720)
.+.|| ||+||+|.+.. ..+||+ |..+......+....+.+|..++...+|||+++.+++...
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 34565 99999998754 357888 7776555555556678889998888999999999887643
No 454
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=82.33 E-value=1.4 Score=41.60 Aligned_cols=116 Identities=11% Similarity=0.113 Sum_probs=80.0
Q ss_pred CCCCccccceEEeecCeEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecCCCCC
Q 005001 466 RHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSAN 545 (720)
Q Consensus 466 ~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~iiH~Dlkp~N 545 (720)
.||++++. .+-.+.+...+.++.-+ +...+-. -...+...+++++.+|+....++++. +|--+.|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~-----ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDN-----IKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGG-----GGGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCc--ccCCHHH-----HHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecce
Confidence 68888876 55566666666666433 2222221 24578899999999999988777666 888999999
Q ss_pred EEeCCCCceEEcccCCCccCCCCCccccccccccccccCccccccCCCcccchhhhHHHHHHHHHhCCCCCC
Q 005001 546 ILLDDELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (720)
Q Consensus 546 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~pf~ 617 (720)
++++.++.+++.-.|+...+++ . .++...=.-.+=+++..+++++..|+
T Consensus 110 L~f~~~~~p~i~~RGik~~l~P------------------~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVVDP------------------L-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EEECTTSCEEESCCEETTTBSC------------------C-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEcCCCCEEEEEccCccCCCC------------------C-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999987776433322 1 11112223456778888999988885
No 455
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=76.65 E-value=4.7 Score=29.53 Aligned_cols=31 Identities=32% Similarity=0.391 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHHHHH-HhhcccccccCCC
Q 005001 308 IVLGAVFLVALALLALYF-CIRKNRRKVSGAR 338 (720)
Q Consensus 308 ~~~~~~~~i~~~l~~~~~-~~~~~~~~~~~~~ 338 (720)
+++|+++.+++.+.+.++ +.++++|.++..|
T Consensus 12 ivlGg~~~lll~~glcI~ccvkcrhRrrqAeR 43 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIFFSVRSRHRRRQAER 43 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCCSSSCTT
T ss_pred HHHhHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 455555544444433333 3333333333333
No 456
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=71.26 E-value=6.3 Score=27.86 Aligned_cols=27 Identities=26% Similarity=0.391 Sum_probs=17.1
Q ss_pred CCCceehhHHHHHHHHHHHHHHHHHHH
Q 005001 300 LPAGAIVGIVLGAVFLVALALLALYFC 326 (720)
Q Consensus 300 ~~~~~i~~~~~~~~~~i~~~l~~~~~~ 326 (720)
.+.++|++.+++++++.++++.++|-|
T Consensus 7 vp~WiIi~svl~GLLLL~Lii~~LwK~ 33 (54)
T 2l8s_A 7 VPLWVILLSAFAGLLLLMLLILALWKI 33 (54)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 346677777777777666666665533
No 457
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=67.18 E-value=6.4 Score=26.34 Aligned_cols=25 Identities=28% Similarity=0.541 Sum_probs=15.3
Q ss_pred CCCceehhHHHHHHHHHHHHHHHHH
Q 005001 300 LPAGAIVGIVLGAVFLVALALLALY 324 (720)
Q Consensus 300 ~~~~~i~~~~~~~~~~i~~~l~~~~ 324 (720)
.+.+.|++.+++++++.++++.++|
T Consensus 8 vp~wiIi~s~l~GLllL~li~~~Lw 32 (42)
T 2k1a_A 8 IPIWWVLVGVLGGLLLLTILVLAMW 32 (42)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456666666666666665555555
No 458
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=67.17 E-value=4.9 Score=25.35 Aligned_cols=26 Identities=42% Similarity=0.793 Sum_probs=17.4
Q ss_pred CCceehhHHHHHHHHHHHHHHHHHHH
Q 005001 301 PAGAIVGIVLGAVFLVALALLALYFC 326 (720)
Q Consensus 301 ~~~~i~~~~~~~~~~i~~~l~~~~~~ 326 (720)
..+.++|+++|.+...+++.++.|++
T Consensus 5 ~~gaIaGIVvgdi~~t~~i~~~vy~~ 30 (33)
T 2l34_A 5 SPGVLAGIVVGDLVLTVLIALAVYFL 30 (33)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEeEeHHHHHHHHHHHHHHhhe
Confidence 35678888888887776555554443
No 459
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=64.19 E-value=7.7 Score=27.51 Aligned_cols=26 Identities=27% Similarity=0.478 Sum_probs=16.4
Q ss_pred CCCceehhHHHHHHHHHHHHHHHHHH
Q 005001 300 LPAGAIVGIVLGAVFLVALALLALYF 325 (720)
Q Consensus 300 ~~~~~i~~~~~~~~~~i~~~l~~~~~ 325 (720)
.+.++|++.++++++++++++.++|-
T Consensus 10 vp~wiIi~svl~GLllL~li~~~LwK 35 (54)
T 2knc_A 10 IPIWWVLVGVLGGLLLLTILVLAMWK 35 (54)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566677777777666666655553
No 460
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=55.69 E-value=3.2 Score=26.48 Aligned_cols=25 Identities=24% Similarity=0.526 Sum_probs=9.7
Q ss_pred ehhHHHHHHHHHHHHHHHHHHHhhcc
Q 005001 305 IVGIVLGAVFLVALALLALYFCIRKN 330 (720)
Q Consensus 305 i~~~~~~~~~~i~~~l~~~~~~~~~~ 330 (720)
|+..++| +++++++.+...+++|||
T Consensus 10 IaagVvg-lll~vii~l~~~~~iRRr 34 (35)
T 1iij_A 10 IIATVVG-VLLFLILVVVVGILIKRR 34 (35)
T ss_dssp HHHHHHH-HHHHHHHTTTTTHHHHHC
T ss_pred eHHHHHH-HHHHHHHHHHhheEEeec
Confidence 3344444 333333333333444443
No 461
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=51.74 E-value=9.5 Score=27.93 Aligned_cols=32 Identities=16% Similarity=0.301 Sum_probs=25.5
Q ss_pred eehhHHHHHHHHHHHHHHHHHHHhhccccccc
Q 005001 304 AIVGIVLGAVFLVALALLALYFCIRKNRRKVS 335 (720)
Q Consensus 304 ~i~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~ 335 (720)
+++|.+++.++++.++++...-|++|+|+-..
T Consensus 12 ivlGg~~~lll~~glcI~ccvkcrhRrrqAeR 43 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIFFSVRSRHRRRQAER 43 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCCSSSCTT
T ss_pred HHHhHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 58899999999999999988877776665443
No 462
>1afo_A Glycophorin A; integral membrane protein, transmembrane helix interactions, membrane protein folding; NMR {Homo sapiens} SCOP: j.35.1.1 PDB: 2kpf_A
Probab=46.95 E-value=27 Score=22.58 Aligned_cols=28 Identities=25% Similarity=0.295 Sum_probs=17.0
Q ss_pred eehhHHHHHHHHHHHHHHHHHHHhhccc
Q 005001 304 AIVGIVLGAVFLVALALLALYFCIRKNR 331 (720)
Q Consensus 304 ~i~~~~~~~~~~i~~~l~~~~~~~~~~~ 331 (720)
.+++++.+....+...+++..++.+|-+
T Consensus 11 ~i~lII~~vmaGiIG~IllI~y~I~rl~ 38 (40)
T 1afo_A 11 EITLIIFGVMAGVIGTILLISYGIRRLI 38 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5666776666666655555556655543
No 463
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=43.49 E-value=13 Score=28.82 Aligned_cols=22 Identities=32% Similarity=0.564 Sum_probs=9.9
Q ss_pred ceehhHHHHHHHHHHHHHHHHH
Q 005001 303 GAIVGIVLGAVFLVALALLALY 324 (720)
Q Consensus 303 ~~i~~~~~~~~~~i~~~l~~~~ 324 (720)
+.|++.++++++++.+++++++
T Consensus 11 ~~Iv~gvi~gilliGllllliw 32 (79)
T 2knc_B 11 LVVLLSVMGAILLIGLAALLIW 32 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444333
No 464
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=41.08 E-value=19 Score=26.56 Aligned_cols=22 Identities=27% Similarity=0.401 Sum_probs=13.6
Q ss_pred ceehhHHHHHHHHHHHHHHHHH
Q 005001 303 GAIVGIVLGAVFLVALALLALY 324 (720)
Q Consensus 303 ~~i~~~~~~~~~~i~~~l~~~~ 324 (720)
.=+.|.+++++++++.+++++.
T Consensus 17 LRigGLifA~vLfi~GI~iilS 38 (67)
T 2jp3_A 17 LQLGGLIFGGLLCIAGIALALS 38 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT
T ss_pred heecchhhHHHHHHHHHHHHHc
Confidence 3466777777776665555543
No 465
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=37.64 E-value=1.1e+02 Score=30.84 Aligned_cols=80 Identities=16% Similarity=0.139 Sum_probs=43.5
Q ss_pred eEEEEEEecCCCCHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCc-EEecCCCCCEEeCCCCc-eEEcc
Q 005001 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL-PSV-VHRNFKSANILLDDELN-PHLSD 558 (720)
Q Consensus 482 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~~-~~i-iH~Dlkp~NIll~~~~~-~kl~D 558 (720)
..+++|+|.+|..|.+.-... ....+.......+. -+-+++.+..+.. -+. -+.--.++|||++.++. +.++|
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~--~~~~f~~~~~k~LG--~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~ID 231 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTS--APEVLTKSTMQQLG--SLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPID 231 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSS--HHHHSCHHHHHHHH--HHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECS
T ss_pred cceehhhhcCCCccccchhhh--hhhhcCHHHHHhhc--hhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEEc
Confidence 467999999876655432100 00112222222211 1335666665532 111 11225789999977554 89999
Q ss_pred cCCCccC
Q 005001 559 CGLAALT 565 (720)
Q Consensus 559 fg~a~~~ 565 (720)
-+++...
T Consensus 232 hn~af~~ 238 (342)
T 1cja_A 232 SKIIPLD 238 (342)
T ss_dssp CCCCCCC
T ss_pred CCccccC
Confidence 9998654
No 466
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=36.07 E-value=86 Score=25.22 Aligned_cols=38 Identities=18% Similarity=0.208 Sum_probs=17.7
Q ss_pred ccccccCCccEEEccccccccccccccCCCCCCCeeecC
Q 005001 147 YSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLS 185 (720)
Q Consensus 147 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 185 (720)
..|.+|++|+.+.|-.+ ++..-...|.++.+|+.+.+.
T Consensus 14 ~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 14 SLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp CTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred HHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 44555555555555432 232333444445555555443
No 467
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=35.69 E-value=2.8e+02 Score=31.00 Aligned_cols=45 Identities=20% Similarity=0.136 Sum_probs=33.6
Q ss_pred HHHHHHHHHHH--HHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 512 NARVRVALGTA--RALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 512 ~~~~~i~~qi~--~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
..+..++..+| ..+.|+=.. +|=.++|||++.+|++.-+|||...
T Consensus 529 ~ar~nF~~SlA~~Svv~YILGl-------GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLLGV-------GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC-------CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHccC-------CCCCCcceEEeCCCCEEEEeehhhh
Confidence 34455555543 355666554 6888999999999999999999874
No 468
>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A
Probab=34.30 E-value=19 Score=24.19 Aligned_cols=22 Identities=32% Similarity=0.564 Sum_probs=10.1
Q ss_pred ceehhHHHHHHHHHHHHHHHHH
Q 005001 303 GAIVGIVLGAVFLVALALLALY 324 (720)
Q Consensus 303 ~~i~~~~~~~~~~i~~~l~~~~ 324 (720)
.++++.++++++++.+++++.+
T Consensus 10 ~~Iv~gvi~~ivliGl~lLliw 31 (43)
T 2k9j_B 10 LVVLLSVMGAILLIGLAALLIW 31 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred eehHHHHHHHHHHHHHHHHHHH
Confidence 3444444454444444444443
No 469
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=34.06 E-value=5e+02 Score=28.42 Aligned_cols=46 Identities=17% Similarity=0.101 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHH--HHHHHHHhcCCCCcEEecCCCCCEEeCCCCceEEcccCCCc
Q 005001 511 WNARVRVALGTA--RALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (720)
Q Consensus 511 ~~~~~~i~~qi~--~~L~~LH~~~~~~iiH~Dlkp~NIll~~~~~~kl~Dfg~a~ 563 (720)
+..+..++..+| ..+.|+=.. +|=.++|||++.+|++.=+|||...
T Consensus 454 ~~a~~nF~~S~A~ySvv~YILGi-------gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYILGV-------GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC-------CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheeeec-------cCCCCcceeEcCCCCEeeeehHHhh
Confidence 455566666654 356666655 5778999999999999999999874
No 470
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=33.61 E-value=34 Score=21.37 Aligned_cols=22 Identities=14% Similarity=0.344 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHHHHhhccc
Q 005001 310 LGAVFLVALALLALYFCIRKNR 331 (720)
Q Consensus 310 ~~~~~~i~~~l~~~~~~~~~~~ 331 (720)
++++.++.+++..-+++||-+|
T Consensus 13 i~gl~vif~~lg~tflywrgrr 34 (40)
T 2l9u_A 13 IAGLVVIFMMLGGTFLYWRGRR 34 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCceeEEEcccc
Confidence 3344444445555556666543
No 471
>2jo1_A Phospholemman; FXYD1, Na,K-ATPase, micelle, hydrolase regulator; NMR {Homo sapiens}
Probab=32.47 E-value=51 Score=24.46 Aligned_cols=22 Identities=23% Similarity=0.387 Sum_probs=13.9
Q ss_pred ceehhHHHHHHHHHHHHHHHHH
Q 005001 303 GAIVGIVLGAVFLVALALLALY 324 (720)
Q Consensus 303 ~~i~~~~~~~~~~i~~~l~~~~ 324 (720)
.-+.|.+++++++++.+++++.
T Consensus 16 LRiGGLifA~vLfi~GI~iilS 37 (72)
T 2jo1_A 16 LQIGGLVIAGILFILGILIVLS 37 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccchHHHHHHHHHHHHHHHc
Confidence 3466777777777665555544
No 472
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=26.21 E-value=87 Score=25.21 Aligned_cols=48 Identities=10% Similarity=0.117 Sum_probs=35.1
Q ss_pred cccccccccccCCCCCCCeeecCCCcccCCCCccccCCCCCCeeEeccc
Q 005001 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNN 211 (720)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N 211 (720)
..++..-...|.++++|+.+.|-.+ ++..-...|.++.+|+.+.+...
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 3455555678888999999988765 44355667888899988887754
No 473
>2zxe_G FXYD10, phospholemman-like protein; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_G*
Probab=25.99 E-value=26 Score=26.32 Aligned_cols=21 Identities=29% Similarity=0.452 Sum_probs=12.2
Q ss_pred ceehhHHHHHHHHHHHHHHHH
Q 005001 303 GAIVGIVLGAVFLVALALLAL 323 (720)
Q Consensus 303 ~~i~~~~~~~~~~i~~~l~~~ 323 (720)
.=+.|.+++++++++.+++++
T Consensus 19 LRigGLifA~vLfi~GI~iil 39 (74)
T 2zxe_G 19 LRVVGLIVAAVLCVIGIIILL 39 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred heeccchhHHHHHHHHHHHHH
Confidence 345667776666665544443
No 474
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=25.40 E-value=85 Score=21.14 Aligned_cols=20 Identities=15% Similarity=0.021 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHhhccccccc
Q 005001 316 VALALLALYFCIRKNRRKVS 335 (720)
Q Consensus 316 i~~~l~~~~~~~~~~~~~~~ 335 (720)
+++++++...++...||++.
T Consensus 20 v~~v~ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 20 LFILVIVGLTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHhhhhhh
Confidence 44444555555555555443
No 475
>2llm_A Amyloid beta A4 protein; alzheimer'S disease, protein fibril; NMR {Homo sapiens} PDB: 2loh_A
Probab=29.25 E-value=17 Score=24.18 Aligned_cols=23 Identities=30% Similarity=0.749 Sum_probs=12.3
Q ss_pred CceehhHHHHHHHHHHHHHHHHH
Q 005001 302 AGAIVGIVLGAVFLVALALLALY 324 (720)
Q Consensus 302 ~~~i~~~~~~~~~~i~~~l~~~~ 324 (720)
.++++|..++++.+..++++.++
T Consensus 16 rga~iGL~v~gVai~~vIVvsl~ 38 (43)
T 2llm_A 16 KGAIIGLMVGGVVIATVIVITLV 38 (43)
Confidence 34566666666655554444333
No 476
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=22.87 E-value=98 Score=20.85 Aligned_cols=15 Identities=13% Similarity=-0.011 Sum_probs=8.1
Q ss_pred HHHHHHHHHhhcccc
Q 005001 318 LALLALYFCIRKNRR 332 (720)
Q Consensus 318 ~~l~~~~~~~~~~~~ 332 (720)
+++++++..++.+++
T Consensus 29 ~~~~~~~RRr~~~~k 43 (44)
T 2ks1_B 29 LGIGLFMRRRHIVRK 43 (44)
T ss_dssp HHHHHHHHTTTCCSC
T ss_pred HHHHHHhhhhHhhcc
Confidence 455555655555443
No 477
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=20.82 E-value=86 Score=24.15 Aligned_cols=25 Identities=20% Similarity=0.195 Sum_probs=14.4
Q ss_pred eehhHHHHHHHHHHHHHHHHHHHhh
Q 005001 304 AIVGIVLGAVFLVALALLALYFCIR 328 (720)
Q Consensus 304 ~i~~~~~~~~~~i~~~l~~~~~~~~ 328 (720)
-+.++++|.+..++++.++++++++
T Consensus 9 n~~~Iv~gvi~gilliGllllliwk 33 (79)
T 2knc_B 9 DILVVLLSVMGAILLIGLAALLIWK 33 (79)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhhHHHHHHHHHHHHHHHHHHHH
Confidence 5555555655555555555556665
Done!