Query 005003
Match_columns 720
No_of_seqs 668 out of 3908
Neff 6.3
Searched_HMMs 13730
Date Mon Mar 25 12:26:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005003.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/005003hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1lv7a_ c.37.1.20 (A:) AAA dom 100.0 4.4E-49 3.2E-53 408.3 28.4 253 249-501 4-256 (256)
2 d1ixza_ c.37.1.20 (A:) AAA dom 100.0 4.9E-48 3.6E-52 398.4 27.8 245 250-494 2-246 (247)
3 d1e32a2 c.37.1.20 (A:201-458) 100.0 2E-44 1.5E-48 373.3 22.9 239 254-495 1-257 (258)
4 d1r7ra3 c.37.1.20 (A:471-735) 100.0 2.6E-42 1.9E-46 358.9 17.3 230 252-481 2-232 (265)
5 d2di4a1 a.269.1.1 (A:406-607) 100.0 1.5E-41 1.1E-45 339.2 15.9 194 507-702 2-196 (202)
6 d2ce7a1 a.269.1.1 (A:411-603) 100.0 1.6E-40 1.2E-44 329.6 17.4 188 507-697 2-192 (193)
7 d1w44a_ c.37.1.11 (A:) NTPase 100.0 5.8E-34 4.2E-38 301.8 -15.6 206 277-502 109-320 (321)
8 d1d2na_ c.37.1.20 (A:) Hexamer 99.9 3.1E-25 2.3E-29 227.1 13.4 193 256-462 8-206 (246)
9 d1in4a2 c.37.1.20 (A:17-254) H 99.9 1.2E-22 9.1E-27 204.3 21.8 216 253-497 5-234 (238)
10 d1ofha_ c.37.1.20 (A:) HslU {H 99.9 2.2E-23 1.6E-27 219.9 15.3 179 258-440 15-214 (309)
11 d1ixsb2 c.37.1.20 (B:4-242) Ho 99.9 5.6E-22 4.1E-26 199.8 22.5 218 252-497 4-235 (239)
12 d1iqpa2 c.37.1.20 (A:2-232) Re 99.8 8.4E-19 6.1E-23 175.4 16.3 203 247-492 14-228 (231)
13 d1sxja2 c.37.1.20 (A:295-547) 99.8 5.1E-19 3.7E-23 178.5 14.8 227 245-495 2-247 (253)
14 d1sxjc2 c.37.1.20 (C:12-238) R 99.8 2.9E-19 2.1E-23 178.1 11.8 210 247-494 4-225 (227)
15 d1njfa_ c.37.1.20 (A:) delta p 99.8 1.6E-17 1.2E-21 167.8 20.0 205 249-494 4-237 (239)
16 d1svma_ c.37.1.20 (A:) Papillo 99.7 6.6E-21 4.8E-25 205.0 -9.6 197 286-501 150-358 (362)
17 d1fnna2 c.37.1.20 (A:1-276) CD 99.7 9.8E-17 7.2E-21 161.2 20.0 228 252-500 11-276 (276)
18 d1w5sa2 c.37.1.20 (A:7-293) CD 99.7 1.6E-16 1.2E-20 160.6 20.2 232 254-496 13-286 (287)
19 d1sxjd2 c.37.1.20 (D:26-262) R 99.7 9.5E-17 6.9E-21 159.9 17.7 213 248-494 3-235 (237)
20 d1sxjb2 c.37.1.20 (B:7-230) Re 99.7 1.1E-16 7.7E-21 159.4 16.3 206 247-495 5-223 (224)
21 d1sxje2 c.37.1.20 (E:4-255) Re 99.7 2.5E-16 1.9E-20 158.2 15.0 193 247-473 1-234 (252)
22 d1g8pa_ c.37.1.20 (A:) ATPase 99.6 7.8E-15 5.7E-19 154.7 18.3 220 252-502 2-310 (333)
23 d1r6bx2 c.37.1.20 (X:169-436) 99.6 7.6E-15 5.5E-19 150.9 15.7 218 255-497 16-265 (268)
24 d1l8qa2 c.37.1.20 (A:77-289) C 99.6 2.8E-14 2E-18 141.9 19.2 194 252-474 5-211 (213)
25 d1jbka_ c.37.1.20 (A:) ClpB, A 99.5 2.4E-14 1.8E-18 140.1 10.4 157 255-436 20-194 (195)
26 d1r6bx3 c.37.1.20 (X:437-751) 99.4 9.3E-13 6.8E-17 138.2 16.0 167 257-440 22-230 (315)
27 d1qvra2 c.37.1.20 (A:149-535) 99.4 1.9E-12 1.4E-16 139.3 15.6 164 254-442 19-199 (387)
28 d1qvra3 c.37.1.20 (A:536-850) 99.4 1.3E-12 9.5E-17 137.1 13.2 164 257-440 23-235 (315)
29 d1um8a_ c.37.1.20 (A:) ClpX {H 99.3 4.6E-12 3.3E-16 135.4 16.6 180 257-438 17-280 (364)
30 d1a5ta2 c.37.1.20 (A:1-207) de 99.3 1.3E-11 9.2E-16 121.7 17.1 157 288-468 22-203 (207)
31 d1ny5a2 c.37.1.20 (A:138-384) 99.3 5.3E-12 3.9E-16 128.0 14.3 205 258-492 1-245 (247)
32 d1gvnb_ c.37.1.21 (B:) Plasmid 99.2 4.7E-14 3.4E-18 142.2 -7.3 68 254-329 4-71 (273)
33 d1g41a_ c.37.1.20 (A:) HslU {H 99.2 1.5E-12 1.1E-16 142.6 4.1 150 258-420 15-169 (443)
34 d2gnoa2 c.37.1.20 (A:11-208) g 98.9 8.1E-09 5.9E-13 100.7 14.0 115 290-428 15-139 (198)
35 d2fnaa2 c.37.1.20 (A:1-283) Ar 98.8 9.6E-08 7E-12 94.4 19.5 192 251-473 6-252 (283)
36 d1ye8a1 c.37.1.11 (A:1-178) Hy 98.4 1E-06 7.3E-11 82.0 12.1 24 293-316 3-26 (178)
37 d1kaga_ c.37.1.2 (A:) Shikimat 98.0 3.6E-06 2.6E-10 75.9 6.8 30 291-320 3-32 (169)
38 d2a5yb3 c.37.1.20 (B:109-385) 97.9 6.9E-05 5.1E-09 75.6 15.5 168 258-462 21-222 (277)
39 d1lw7a2 c.37.1.1 (A:220-411) T 97.9 2.7E-06 2E-10 78.3 4.3 39 290-328 7-45 (192)
40 d1zp6a1 c.37.1.25 (A:6-181) Hy 97.8 5.8E-06 4.2E-10 76.1 4.5 38 291-328 5-42 (176)
41 d1viaa_ c.37.1.2 (A:) Shikimat 97.8 1.5E-05 1.1E-09 73.9 7.3 31 291-321 1-31 (161)
42 d1qhxa_ c.37.1.3 (A:) Chloramp 97.7 1.6E-05 1.2E-09 72.7 5.6 39 290-328 3-41 (178)
43 d1e6ca_ c.37.1.2 (A:) Shikimat 97.7 2.4E-05 1.8E-09 72.7 6.4 37 290-328 2-38 (170)
44 d1rkba_ c.37.1.1 (A:) Adenylat 97.6 9.9E-06 7.2E-10 74.1 3.0 29 292-320 6-34 (173)
45 d2iyva1 c.37.1.2 (A:2-166) Shi 97.6 3.4E-05 2.5E-09 71.3 6.3 31 290-321 2-32 (165)
46 d1tf7a2 c.37.1.11 (A:256-497) 97.5 0.00011 8.1E-09 71.3 9.5 76 287-362 23-129 (242)
47 d2i3ba1 c.37.1.11 (A:1-189) Ca 97.4 4.5E-05 3.3E-09 69.8 4.3 24 291-314 2-25 (189)
48 d1knqa_ c.37.1.17 (A:) Glucona 97.4 3.9E-05 2.9E-09 70.2 3.7 32 290-321 6-37 (171)
49 d2bdta1 c.37.1.25 (A:1-176) Hy 97.4 4.4E-05 3.2E-09 69.3 3.8 35 291-326 3-37 (176)
50 d1y63a_ c.37.1.1 (A:) Probable 97.4 5.2E-05 3.8E-09 69.4 4.3 26 291-316 6-31 (174)
51 d1zaka1 c.37.1.1 (A:3-127,A:15 97.3 9.8E-05 7.1E-09 69.5 6.0 39 290-330 3-41 (189)
52 d1ak2a1 c.37.1.1 (A:14-146,A:1 97.2 7.9E-05 5.8E-09 70.1 3.6 34 293-328 6-39 (190)
53 d1qf9a_ c.37.1.1 (A:) UMP/CMP 97.2 0.00011 8.1E-09 69.2 4.4 38 288-327 4-41 (194)
54 d3adka_ c.37.1.1 (A:) Adenylat 97.2 0.00024 1.8E-08 67.0 6.9 39 290-330 8-46 (194)
55 d1ly1a_ c.37.1.1 (A:) Polynucl 97.1 0.0002 1.4E-08 64.2 5.6 37 291-328 3-39 (152)
56 d1bifa1 c.37.1.7 (A:37-249) 6- 97.1 0.00055 4E-08 64.3 8.9 39 290-328 2-43 (213)
57 d1yj5a2 c.37.1.1 (A:351-522) 5 97.1 0.00031 2.3E-08 65.7 6.9 38 288-327 12-49 (172)
58 d1zina1 c.37.1.1 (A:1-125,A:16 97.1 0.00014 1E-08 67.3 4.2 35 293-329 3-37 (182)
59 d1tf7a1 c.37.1.11 (A:14-255) C 97.1 0.00096 7E-08 63.3 10.2 39 286-324 22-64 (242)
60 d1u94a1 c.37.1.11 (A:6-268) Re 97.0 0.0006 4.3E-08 68.3 8.7 117 286-402 50-188 (263)
61 d1m8pa3 c.37.1.15 (A:391-573) 97.0 0.00033 2.4E-08 63.6 5.6 24 292-315 8-31 (183)
62 d1xp8a1 c.37.1.11 (A:15-282) R 97.0 0.001 7.5E-08 66.7 9.8 119 286-404 53-193 (268)
63 d2cdna1 c.37.1.1 (A:1-181) Ade 97.0 0.00017 1.2E-08 67.2 3.4 35 292-328 2-36 (181)
64 d1a1va1 c.37.1.14 (A:190-325) 97.0 0.0015 1.1E-07 57.7 9.6 33 292-324 10-42 (136)
65 d1x6va3 c.37.1.4 (A:34-228) Ad 96.9 7.4E-05 5.4E-09 69.7 0.7 37 290-326 19-58 (195)
66 d1s3ga1 c.37.1.1 (A:1-125,A:16 96.9 0.00025 1.8E-08 66.2 4.2 34 293-328 3-36 (182)
67 d1j8yf2 c.37.1.10 (F:87-297) G 96.9 0.00075 5.5E-08 65.4 7.8 39 288-326 10-51 (211)
68 d2qy9a2 c.37.1.10 (A:285-495) 96.9 0.00094 6.9E-08 64.7 8.4 116 287-411 6-147 (211)
69 d1teva_ c.37.1.1 (A:) UMP/CMP 96.9 0.00027 2E-08 66.3 4.1 37 290-328 1-37 (194)
70 d1ukza_ c.37.1.1 (A:) Uridylat 96.9 0.00027 2E-08 66.6 3.9 34 292-327 10-43 (196)
71 d1ckea_ c.37.1.1 (A:) CMP kina 96.9 0.00026 1.9E-08 67.3 3.8 35 292-328 5-39 (225)
72 d2ak3a1 c.37.1.1 (A:0-124,A:16 96.9 0.00025 1.8E-08 67.3 3.6 35 292-328 8-42 (189)
73 d1akya1 c.37.1.1 (A:3-130,A:16 96.8 0.00029 2.1E-08 65.7 3.8 36 292-329 4-39 (180)
74 d1okkd2 c.37.1.10 (D:97-303) G 96.8 0.0017 1.2E-07 62.7 9.2 114 290-412 6-145 (207)
75 d1e4va1 c.37.1.1 (A:1-121,A:15 96.8 0.00039 2.8E-08 64.5 4.1 33 293-327 3-35 (179)
76 d1q3ta_ c.37.1.1 (A:) CMP kina 96.7 0.00037 2.7E-08 66.6 3.8 33 293-327 6-38 (223)
77 d1mo6a1 c.37.1.11 (A:1-269) Re 96.7 0.0014 1E-07 65.8 7.7 116 286-402 56-194 (269)
78 d1ls1a2 c.37.1.10 (A:89-295) G 96.5 0.0016 1.2E-07 62.8 6.8 37 290-326 10-49 (207)
79 d1p9ra_ c.37.1.11 (A:) Extrace 96.5 0.0013 9.6E-08 69.5 6.7 99 249-361 130-239 (401)
80 d1khta_ c.37.1.1 (A:) Adenylat 96.5 0.0011 7.8E-08 60.4 5.2 35 291-325 2-39 (190)
81 d1w36d1 c.37.1.19 (D:2-360) Ex 96.5 0.0058 4.3E-07 63.5 11.6 19 292-310 165-183 (359)
82 d1vmaa2 c.37.1.10 (A:82-294) G 96.5 0.0027 2E-07 61.4 8.3 40 287-326 8-50 (213)
83 d2pmka1 c.37.1.12 (A:467-707) 96.5 0.0019 1.4E-07 63.7 7.1 24 291-314 30-53 (241)
84 d1cr2a_ c.37.1.11 (A:) Gene 4 96.5 0.0026 1.9E-07 62.8 8.2 39 286-324 31-73 (277)
85 d2hyda1 c.37.1.12 (A:324-578) 96.4 0.0018 1.3E-07 64.4 6.3 31 283-313 35-67 (255)
86 d3b60a1 c.37.1.12 (A:329-581) 96.3 0.0023 1.7E-07 63.5 7.0 30 284-313 33-64 (253)
87 d1g6oa_ c.37.1.11 (A:) Hexamer 96.3 0.00078 5.7E-08 69.4 3.4 68 291-358 167-244 (323)
88 d1nlfa_ c.37.1.11 (A:) Hexamer 96.3 0.0044 3.2E-07 60.7 8.8 37 290-326 29-78 (274)
89 d1szpa2 c.37.1.11 (A:145-395) 96.3 0.0019 1.4E-07 61.4 5.7 78 286-363 30-143 (251)
90 d1m7ga_ c.37.1.4 (A:) Adenosin 96.2 0.0018 1.3E-07 62.2 5.0 39 290-328 24-66 (208)
91 d1nksa_ c.37.1.1 (A:) Adenylat 96.1 0.0021 1.5E-07 58.7 4.8 34 292-325 3-39 (194)
92 d2p6ra3 c.37.1.19 (A:1-202) He 96.0 0.0087 6.3E-07 56.3 9.1 18 291-308 41-58 (202)
93 d1np6a_ c.37.1.10 (A:) Molybdo 96.0 0.0014 1.1E-07 59.0 3.0 31 292-322 4-37 (170)
94 d1l2ta_ c.37.1.12 (A:) MJ0796 95.8 0.0091 6.6E-07 58.3 8.3 21 292-312 33-53 (230)
95 d1rz3a_ c.37.1.6 (A:) Hypothet 95.8 0.0063 4.6E-07 55.9 6.8 36 290-325 22-60 (198)
96 d1jj7a_ c.37.1.12 (A:) Peptide 95.8 0.0042 3.1E-07 61.5 5.9 31 283-313 31-63 (251)
97 d1gkya_ c.37.1.1 (A:) Guanylat 95.7 0.0034 2.5E-07 58.7 4.3 26 291-316 2-27 (186)
98 d1wb9a2 c.37.1.12 (A:567-800) 95.6 0.027 2E-06 54.8 11.0 104 291-408 42-167 (234)
99 d1lvga_ c.37.1.1 (A:) Guanylat 95.6 0.0034 2.5E-07 59.0 4.1 28 291-318 1-28 (190)
100 d2awna2 c.37.1.12 (A:4-235) Ma 95.5 0.0065 4.7E-07 59.4 5.6 21 292-312 28-48 (232)
101 d1yksa1 c.37.1.14 (A:185-324) 95.4 0.0062 4.5E-07 52.6 4.9 34 290-323 7-44 (140)
102 d2fz4a1 c.37.1.19 (A:24-229) D 95.4 0.03 2.2E-06 52.9 9.9 37 292-328 87-124 (206)
103 d1v43a3 c.37.1.12 (A:7-245) Hy 95.3 0.015 1.1E-06 57.1 7.7 28 286-313 26-55 (239)
104 d1mv5a_ c.37.1.12 (A:) Multidr 95.3 0.0027 2E-07 62.6 2.4 28 285-312 21-50 (242)
105 d1vpla_ c.37.1.12 (A:) Putativ 95.3 0.013 9.2E-07 57.5 7.3 23 292-314 30-52 (238)
106 d1sgwa_ c.37.1.12 (A:) Putativ 95.3 0.016 1.1E-06 55.1 7.7 23 292-314 29-51 (200)
107 d1g2912 c.37.1.12 (1:1-240) Ma 95.2 0.013 9.5E-07 57.5 7.0 22 292-313 31-52 (240)
108 d1n0wa_ c.37.1.11 (A:) DNA rep 95.2 0.0046 3.4E-07 56.7 3.4 29 286-314 19-47 (242)
109 d3d31a2 c.37.1.12 (A:1-229) Su 95.2 0.0056 4.1E-07 59.8 3.9 22 292-313 28-49 (229)
110 d3dhwc1 c.37.1.12 (C:1-240) Me 95.1 0.016 1.2E-06 56.7 7.4 22 292-313 33-54 (240)
111 d2fh5b1 c.37.1.8 (B:63-269) Si 95.0 0.026 1.9E-06 52.7 8.3 23 291-313 1-23 (207)
112 d1ewqa2 c.37.1.12 (A:542-765) 95.0 0.022 1.6E-06 55.2 7.7 100 292-406 37-158 (224)
113 d1v5wa_ c.37.1.11 (A:) Meiotic 94.8 0.0078 5.7E-07 57.5 4.0 29 286-314 33-61 (258)
114 d1pzna2 c.37.1.11 (A:96-349) D 94.8 0.0085 6.2E-07 57.3 4.2 28 287-314 33-60 (254)
115 d1uj2a_ c.37.1.6 (A:) Uridine- 94.8 0.011 8.1E-07 55.7 5.0 37 290-326 2-46 (213)
116 d2gj8a1 c.37.1.8 (A:216-376) P 94.8 0.026 1.9E-06 50.2 7.2 22 292-313 3-24 (161)
117 d1kgda_ c.37.1.1 (A:) Guanylat 94.8 0.012 8.6E-07 54.8 5.0 25 290-314 3-27 (178)
118 d1oxxk2 c.37.1.12 (K:1-242) Gl 94.8 0.011 8.2E-07 58.0 5.0 21 292-312 33-53 (242)
119 d1gm5a3 c.37.1.19 (A:286-549) 94.8 0.098 7.2E-06 51.7 12.1 131 263-422 86-258 (264)
120 d1znwa1 c.37.1.1 (A:20-201) Gu 94.6 0.011 7.9E-07 54.6 4.1 25 291-315 3-27 (182)
121 d1ji0a_ c.37.1.12 (A:) Branche 94.5 0.025 1.8E-06 55.4 6.7 22 292-313 34-55 (240)
122 d1uf9a_ c.37.1.1 (A:) Dephosph 94.4 0.021 1.5E-06 52.8 5.8 36 290-328 3-38 (191)
123 d2eyqa3 c.37.1.19 (A:546-778) 94.4 0.15 1.1E-05 49.4 12.3 54 263-325 58-114 (233)
124 d1tuea_ c.37.1.20 (A:) Replica 94.1 0.0098 7.1E-07 56.8 2.7 32 287-318 50-81 (205)
125 d1r8sa_ c.37.1.8 (A:) ADP-ribo 93.9 0.086 6.3E-06 46.0 8.6 21 293-313 3-23 (160)
126 d1sq5a_ c.37.1.6 (A:) Pantothe 93.8 0.028 2E-06 57.0 5.7 41 287-327 77-122 (308)
127 d1g6ha_ c.37.1.12 (A:) MJ1267 93.8 0.066 4.8E-06 52.6 8.3 22 292-313 32-53 (254)
128 d1xjca_ c.37.1.10 (A:) Molybdo 93.6 0.026 1.9E-06 50.9 4.6 31 292-322 3-36 (165)
129 d1s2ma1 c.37.1.19 (A:46-251) P 93.6 0.13 9.3E-06 48.2 9.8 49 255-305 2-53 (206)
130 d1htwa_ c.37.1.18 (A:) Hypothe 93.5 0.048 3.5E-06 49.9 6.2 26 292-317 35-60 (158)
131 d1kkma_ c.91.1.2 (A:) HPr kina 93.5 0.022 1.6E-06 53.2 3.9 29 290-319 14-42 (176)
132 d1wp9a1 c.37.1.19 (A:1-200) pu 93.4 0.21 1.5E-05 45.8 10.8 32 292-323 25-60 (200)
133 d1odfa_ c.37.1.6 (A:) Hypothet 93.4 0.037 2.7E-06 55.5 5.8 42 286-327 23-70 (286)
134 d2i1qa2 c.37.1.11 (A:65-322) D 93.4 0.018 1.3E-06 54.2 3.2 28 287-314 31-58 (258)
135 d1mkya1 c.37.1.8 (A:2-172) Pro 93.3 0.16 1.1E-05 45.5 9.5 22 292-313 2-23 (171)
136 d1h65a_ c.37.1.8 (A:) Chloropl 93.3 0.07 5.1E-06 52.2 7.4 42 265-313 14-55 (257)
137 d1wf3a1 c.37.1.8 (A:3-180) GTP 93.3 0.055 4E-06 49.1 6.3 22 292-313 7-28 (178)
138 d1nrjb_ c.37.1.8 (B:) Signal r 93.3 0.15 1.1E-05 46.8 9.5 23 292-314 5-27 (209)
139 d1jjva_ c.37.1.1 (A:) Dephosph 93.2 0.047 3.4E-06 51.3 5.9 34 293-329 5-38 (205)
140 d1ctqa_ c.37.1.8 (A:) cH-p21 R 93.1 0.02 1.4E-06 51.7 2.9 21 293-313 6-26 (166)
141 d1gkub1 c.37.1.16 (B:1-250) He 93.0 0.051 3.7E-06 52.1 5.8 33 291-323 59-94 (237)
142 d1nn5a_ c.37.1.1 (A:) Thymidyl 92.8 0.033 2.4E-06 52.9 4.1 30 293-322 6-38 (209)
143 d1zd9a1 c.37.1.8 (A:18-181) AD 92.7 0.12 8.8E-06 46.1 7.7 22 292-313 4-25 (164)
144 d1knxa2 c.91.1.2 (A:133-309) H 92.7 0.03 2.2E-06 52.2 3.5 29 290-319 15-43 (177)
145 d1e0sa_ c.37.1.8 (A:) ADP-ribo 92.6 0.048 3.5E-06 49.3 4.8 22 292-313 14-35 (173)
146 d1ko7a2 c.91.1.2 (A:130-298) H 92.5 0.037 2.7E-06 51.3 3.8 29 290-319 15-43 (169)
147 d2j0sa1 c.37.1.19 (A:22-243) P 92.1 0.35 2.6E-05 46.0 10.7 52 252-305 15-69 (222)
148 d2f7sa1 c.37.1.8 (A:5-190) Rab 91.9 0.26 1.9E-05 44.6 9.1 21 293-313 8-28 (186)
149 d1s96a_ c.37.1.1 (A:) Guanylat 91.9 0.046 3.4E-06 51.8 3.8 24 292-315 4-27 (205)
150 d1fzqa_ c.37.1.8 (A:) ADP-ribo 91.8 0.089 6.5E-06 47.3 5.6 22 292-313 18-39 (176)
151 d1z0fa1 c.37.1.8 (A:8-173) Rab 91.7 0.073 5.3E-06 47.7 4.8 21 293-313 7-27 (166)
152 d1hv8a1 c.37.1.19 (A:3-210) Pu 91.7 0.28 2E-05 45.9 9.2 56 254-311 4-63 (208)
153 d2qtvb1 c.37.1.8 (B:24-189) SA 91.6 0.044 3.2E-06 47.8 3.1 21 293-313 3-23 (166)
154 d2gjsa1 c.37.1.8 (A:91-258) Ra 91.5 0.07 5.1E-06 48.1 4.4 21 293-313 4-24 (168)
155 d2g9na1 c.37.1.19 (A:21-238) I 91.4 0.14 1E-05 48.7 6.8 52 254-307 12-66 (218)
156 d2vp4a1 c.37.1.1 (A:12-208) De 91.4 0.042 3E-06 50.7 2.8 31 289-319 8-38 (197)
157 d1vhta_ c.37.1.1 (A:) Dephosph 91.4 0.052 3.8E-06 51.2 3.5 36 292-330 5-40 (208)
158 d2p67a1 c.37.1.10 (A:1-327) LA 91.3 0.27 2E-05 49.8 9.2 23 292-314 56-78 (327)
159 d1gsia_ c.37.1.1 (A:) Thymidyl 91.2 0.078 5.7E-06 49.1 4.6 31 293-323 3-36 (208)
160 d1upta_ c.37.1.8 (A:) ADP-ribo 91.2 0.051 3.7E-06 47.8 3.1 22 292-313 7-28 (169)
161 d1yrba1 c.37.1.10 (A:1-244) AT 91.2 0.05 3.6E-06 51.4 3.2 29 293-321 3-33 (244)
162 g1f2t.1 c.37.1.12 (A:,B:) Rad5 91.1 0.045 3.3E-06 52.8 2.9 21 293-313 26-46 (292)
163 d1u8za_ c.37.1.8 (A:) Ras-rela 91.1 0.052 3.8E-06 49.1 3.1 21 293-313 7-27 (168)
164 d1ksha_ c.37.1.8 (A:) ADP-ribo 90.5 0.047 3.4E-06 48.8 2.1 22 292-313 4-25 (165)
165 d1uaaa1 c.37.1.19 (A:2-307) DE 90.3 0.062 4.5E-06 52.6 3.1 17 291-307 15-31 (306)
166 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 90.2 0.056 4E-06 48.4 2.4 22 292-313 15-36 (186)
167 d2a5ja1 c.37.1.8 (A:9-181) Rab 90.1 0.073 5.3E-06 48.1 3.1 21 293-313 6-26 (173)
168 d2ocpa1 c.37.1.1 (A:37-277) De 90.1 0.11 7.8E-06 49.3 4.5 29 290-318 2-30 (241)
169 d2onka1 c.37.1.12 (A:1-240) Mo 90.0 0.064 4.6E-06 52.4 2.8 22 293-314 27-48 (240)
170 d2qm8a1 c.37.1.10 (A:5-327) Me 89.9 0.4 2.9E-05 48.4 9.0 33 292-324 53-90 (323)
171 d1ihua1 c.37.1.10 (A:1-296) Ar 89.8 0.14 1E-05 49.9 5.2 36 288-323 6-44 (296)
172 d1zj6a1 c.37.1.8 (A:2-178) ADP 89.8 0.11 8.2E-06 46.4 4.1 22 292-313 17-38 (177)
173 d1a7ja_ c.37.1.6 (A:) Phosphor 89.7 0.069 5.1E-06 53.5 2.9 36 292-327 6-44 (288)
174 d1deka_ c.37.1.1 (A:) Deoxynuc 89.6 0.07 5.1E-06 50.9 2.7 32 292-325 3-34 (241)
175 d1z2aa1 c.37.1.8 (A:8-171) Rab 89.3 0.092 6.7E-06 46.9 3.1 20 293-312 5-24 (164)
176 d2cxxa1 c.37.1.8 (A:2-185) GTP 89.2 0.072 5.3E-06 48.1 2.3 22 292-313 2-23 (184)
177 d1u0ja_ c.37.1.20 (A:) Rep 40 89.1 0.12 8.9E-06 50.9 4.2 27 290-316 104-130 (267)
178 d1pjra1 c.37.1.19 (A:1-318) DE 89.1 0.07 5.1E-06 52.8 2.4 16 292-307 26-41 (318)
179 d2b8ta1 c.37.1.24 (A:11-149) T 89.1 0.38 2.8E-05 42.5 7.1 69 293-361 5-91 (139)
180 d4tmka_ c.37.1.1 (A:) Thymidyl 89.0 0.09 6.6E-06 49.1 2.9 23 292-314 4-26 (210)
181 d1kaoa_ c.37.1.8 (A:) Rap2a {H 88.9 0.1 7.4E-06 46.7 3.1 21 293-313 6-26 (167)
182 d1r0wa_ c.37.1.12 (A:) Cystic 88.8 0.085 6.2E-06 52.6 2.7 34 281-314 51-86 (281)
183 d3raba_ c.37.1.8 (A:) Rab3a {R 88.7 0.11 7.8E-06 46.8 3.1 21 293-313 8-28 (169)
184 d2ew1a1 c.37.1.8 (A:4-174) Rab 88.6 0.1 7.6E-06 46.9 3.0 20 293-312 8-27 (171)
185 d2atva1 c.37.1.8 (A:5-172) Ras 88.1 0.12 9E-06 46.4 3.1 21 293-313 5-25 (168)
186 d2f9la1 c.37.1.8 (A:8-182) Rab 88.0 0.12 9E-06 46.6 3.1 20 293-312 7-26 (175)
187 d1lnza2 c.37.1.8 (A:158-342) O 87.8 0.53 3.9E-05 42.3 7.5 20 293-312 4-23 (185)
188 d1b0ua_ c.37.1.12 (A:) ATP-bin 87.7 0.096 7E-06 51.5 2.3 23 292-314 30-52 (258)
189 d1svia_ c.37.1.8 (A:) Probable 87.7 0.11 7.8E-06 47.8 2.5 21 293-313 26-46 (195)
190 d2erya1 c.37.1.8 (A:10-180) r- 87.7 0.13 9.4E-06 46.2 3.0 20 293-312 8-27 (171)
191 d1r2qa_ c.37.1.8 (A:) Rab5a {H 87.7 0.14 9.9E-06 46.0 3.1 21 293-313 9-29 (170)
192 d1z08a1 c.37.1.8 (A:17-183) Ra 87.7 0.13 9.7E-06 45.9 3.1 20 293-312 6-25 (167)
193 d1ky3a_ c.37.1.8 (A:) Rab-rela 87.6 0.14 1E-05 46.0 3.1 20 293-312 5-24 (175)
194 d1g16a_ c.37.1.8 (A:) Rab-rela 87.5 0.13 9.8E-06 45.8 3.0 21 293-313 5-25 (166)
195 d1tmka_ c.37.1.1 (A:) Thymidyl 87.4 0.22 1.6E-05 46.9 4.6 31 292-322 5-35 (214)
196 g1ii8.1 c.37.1.12 (A:,B:) Rad5 87.3 0.12 8.5E-06 50.4 2.6 21 292-312 25-45 (369)
197 d1z06a1 c.37.1.8 (A:32-196) Ra 87.3 0.15 1.1E-05 45.3 3.1 20 293-312 5-24 (165)
198 d2erxa1 c.37.1.8 (A:6-176) di- 87.3 0.13 9.6E-06 46.0 2.8 21 293-313 5-25 (171)
199 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 87.2 0.15 1.1E-05 46.4 3.1 21 293-313 5-25 (184)
200 d1e9ra_ c.37.1.11 (A:) Bacteri 87.1 0.18 1.3E-05 52.2 4.0 34 291-324 51-87 (433)
201 d2bv3a2 c.37.1.8 (A:7-282) Elo 86.8 0.88 6.4E-05 44.8 9.0 24 291-314 7-30 (276)
202 d1yzqa1 c.37.1.8 (A:14-177) Ra 86.8 0.16 1.1E-05 45.2 3.0 20 293-312 3-22 (164)
203 d1xtqa1 c.37.1.8 (A:3-169) GTP 86.8 0.16 1.1E-05 45.4 3.0 22 292-313 6-27 (167)
204 d2fn4a1 c.37.1.8 (A:24-196) r- 86.8 0.16 1.1E-05 45.9 3.0 22 292-313 8-29 (173)
205 d2bmea1 c.37.1.8 (A:6-179) Rab 86.7 0.16 1.1E-05 45.7 3.0 20 293-312 8-27 (174)
206 d1x3sa1 c.37.1.8 (A:2-178) Rab 86.7 0.16 1.2E-05 45.8 3.1 20 293-312 10-29 (177)
207 d2g6ba1 c.37.1.8 (A:58-227) Ra 86.6 0.17 1.2E-05 45.3 3.1 21 293-313 9-29 (170)
208 d1p5zb_ c.37.1.1 (B:) Deoxycyt 86.4 0.093 6.8E-06 49.5 1.3 24 292-315 4-27 (241)
209 d1oywa2 c.37.1.19 (A:1-206) Re 86.3 0.84 6.1E-05 41.9 8.1 31 291-321 41-71 (206)
210 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 86.1 0.18 1.3E-05 45.5 3.0 21 293-313 5-25 (177)
211 d1z0ja1 c.37.1.8 (A:2-168) Rab 86.0 0.19 1.4E-05 44.9 3.1 21 293-313 7-27 (167)
212 d1c1ya_ c.37.1.8 (A:) Rap1A {H 85.9 0.19 1.4E-05 44.8 3.1 21 293-313 6-26 (167)
213 d1wmsa_ c.37.1.8 (A:) Rab9a {H 85.9 0.19 1.4E-05 45.2 3.1 21 293-313 9-29 (174)
214 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 85.3 0.21 1.6E-05 44.6 3.1 21 293-313 6-26 (170)
215 d1u0la2 c.37.1.8 (A:69-293) Pr 85.1 0.3 2.2E-05 46.9 4.2 31 292-322 97-127 (225)
216 d1moza_ c.37.1.8 (A:) ADP-ribo 84.8 0.16 1.1E-05 46.1 1.9 22 291-312 18-39 (182)
217 d2g3ya1 c.37.1.8 (A:73-244) GT 84.6 0.23 1.6E-05 44.7 2.9 20 293-312 6-25 (172)
218 d1x1ra1 c.37.1.8 (A:10-178) Ra 84.6 0.24 1.7E-05 44.4 3.1 21 293-313 7-27 (169)
219 d2bcgy1 c.37.1.8 (Y:3-196) GTP 84.5 0.23 1.7E-05 45.6 3.0 20 293-312 9-28 (194)
220 d1xzpa2 c.37.1.8 (A:212-371) T 84.3 0.099 7.2E-06 46.1 0.2 21 293-313 3-23 (160)
221 d2fu5c1 c.37.1.8 (C:3-175) Rab 84.3 0.15 1.1E-05 45.9 1.5 20 293-312 9-28 (173)
222 d1egaa1 c.37.1.8 (A:4-182) GTP 84.3 0.22 1.6E-05 44.6 2.6 21 293-313 8-28 (179)
223 d1t5la1 c.37.1.19 (A:2-414) Nu 83.8 2.3 0.00016 44.1 10.8 34 292-325 33-66 (413)
224 d2atxa1 c.37.1.8 (A:9-193) Rho 83.7 0.26 1.9E-05 44.8 3.0 21 293-313 12-32 (185)
225 d1m7ba_ c.37.1.8 (A:) RhoE (RN 83.7 0.26 1.9E-05 44.7 3.0 21 293-313 5-25 (179)
226 d1mh1a_ c.37.1.8 (A:) Rac {Hum 83.5 0.28 2E-05 44.5 3.0 22 292-313 7-28 (183)
227 d1qhla_ c.37.1.12 (A:) Cell di 83.4 0.094 6.8E-06 47.0 -0.4 22 293-314 27-48 (222)
228 d2ngra_ c.37.1.8 (A:) CDC42 {H 83.4 0.27 2E-05 44.9 3.0 21 293-313 6-26 (191)
229 d1mkya2 c.37.1.8 (A:173-358) P 83.3 0.25 1.8E-05 44.5 2.7 22 292-313 10-31 (186)
230 d1i2ma_ c.37.1.8 (A:) Ran {Hum 83.1 0.15 1.1E-05 45.9 1.0 20 293-312 6-25 (170)
231 d1l7vc_ c.37.1.12 (C:) ABC tra 82.5 0.21 1.5E-05 48.0 1.9 22 292-313 27-48 (231)
232 d2bmfa2 c.37.1.14 (A:178-482) 82.4 1.1 8.2E-05 43.0 7.4 17 289-305 8-24 (305)
233 d1ihua2 c.37.1.10 (A:308-586) 81.9 0.7 5.1E-05 44.4 5.5 34 291-324 21-57 (279)
234 d1byia_ c.37.1.10 (A:) Dethiob 81.6 0.54 3.9E-05 42.9 4.3 32 291-322 2-37 (224)
235 d1puia_ c.37.1.8 (A:) Probable 81.5 0.27 1.9E-05 43.8 2.0 21 292-312 18-38 (188)
236 d1wrba1 c.37.1.19 (A:164-401) 81.5 1.4 0.0001 41.9 7.5 15 291-305 59-73 (238)
237 g1xew.1 c.37.1.12 (X:,Y:) Smc 81.2 0.25 1.8E-05 48.8 1.9 23 293-315 29-51 (329)
238 d1udxa2 c.37.1.8 (A:157-336) O 80.9 0.28 2.1E-05 44.1 2.0 20 293-312 4-23 (180)
239 d1zcba2 c.37.1.8 (A:47-75,A:20 80.5 0.38 2.8E-05 43.6 2.8 18 293-310 5-22 (200)
240 d1t9ha2 c.37.1.8 (A:68-298) Pr 79.6 0.2 1.4E-05 48.5 0.4 32 291-322 98-129 (231)
241 d2jdid3 c.37.1.11 (D:82-357) C 78.9 1.8 0.00013 42.4 7.5 21 293-313 71-91 (276)
242 d2bmja1 c.37.1.8 (A:66-240) Ce 77.1 0.64 4.7E-05 42.0 3.2 22 292-313 7-28 (175)
243 d1z63a1 c.37.1.19 (A:432-661) 76.0 3.5 0.00025 38.3 8.4 38 291-328 32-74 (230)
244 d1p6xa_ c.37.1.1 (A:) Thymidin 75.7 0.85 6.2E-05 46.1 4.0 30 292-321 8-39 (333)
245 d1azta2 c.37.1.8 (A:35-65,A:20 75.2 0.83 6E-05 42.8 3.5 23 292-314 8-30 (221)
246 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 74.8 0.75 5.4E-05 41.2 3.0 21 293-313 5-25 (200)
247 d1e69a_ c.37.1.12 (A:) Smc hea 73.8 0.48 3.5E-05 46.1 1.4 23 292-314 26-48 (308)
248 d1w1wa_ c.37.1.12 (A:) Smc hea 72.9 0.75 5.5E-05 46.4 2.7 23 293-315 28-50 (427)
249 d1c4oa1 c.37.1.19 (A:2-409) Nu 72.2 2.3 0.00017 43.9 6.4 48 268-325 16-63 (408)
250 d1tq4a_ c.37.1.8 (A:) Interfer 71.7 1.2 8.8E-05 45.9 4.1 23 290-312 56-78 (400)
251 d1xpua3 c.37.1.11 (A:129-417) 71.4 0.95 6.9E-05 44.9 3.0 21 293-313 46-66 (289)
252 d1nija1 c.37.1.10 (A:2-223) Hy 71.0 0.76 5.5E-05 43.4 2.1 22 293-314 6-27 (222)
253 d1cp2a_ c.37.1.10 (A:) Nitroge 69.8 1.8 0.00013 41.3 4.5 33 292-324 3-38 (269)
254 d1osna_ c.37.1.1 (A:) Thymidin 68.7 0.87 6.4E-05 46.0 2.0 24 293-316 8-31 (331)
255 d1svsa1 c.37.1.8 (A:32-60,A:18 68.0 1.2 9E-05 39.5 2.8 20 293-312 5-24 (195)
256 d1xx6a1 c.37.1.24 (A:2-142) Th 67.5 5.5 0.0004 34.8 7.0 68 293-361 10-92 (141)
257 d2dy1a2 c.37.1.8 (A:8-274) Elo 67.2 1.5 0.00011 42.7 3.5 23 291-313 3-25 (267)
258 d1e2ka_ c.37.1.1 (A:) Thymidin 65.2 1 7.3E-05 45.5 1.6 23 293-315 7-29 (329)
259 d1wb1a4 c.37.1.8 (A:1-179) Elo 64.5 1.6 0.00012 39.1 2.8 22 292-313 7-28 (179)
260 d1hyqa_ c.37.1.10 (A:) Cell di 64.3 2.7 0.0002 38.5 4.5 30 294-323 6-38 (232)
261 d1q0ua_ c.37.1.19 (A:) Probabl 62.3 1.5 0.00011 40.3 2.1 49 255-305 2-53 (209)
262 d1g3qa_ c.37.1.10 (A:) Cell di 61.5 3.7 0.00027 37.5 5.0 32 292-323 4-39 (237)
263 d1t6na_ c.37.1.19 (A:) Spliceo 61.1 1.8 0.00013 40.2 2.4 50 255-306 2-54 (207)
264 d1j3ba1 c.91.1.1 (A:212-529) P 61.0 1.4 9.9E-05 44.2 1.7 17 292-308 16-32 (318)
265 d1qdea_ c.37.1.19 (A:) Initiat 60.7 3 0.00022 38.7 4.1 53 252-306 8-63 (212)
266 g1f2t.1 c.37.1.12 (A:,B:) Rad5 60.6 6 0.00044 36.9 6.4 63 342-425 218-280 (292)
267 d2akab1 c.37.1.8 (B:6-304) Dyn 59.7 2.8 0.00021 40.4 3.8 26 287-313 24-49 (299)
268 d1z3ix2 c.37.1.19 (X:92-389) R 59.1 16 0.0011 35.0 9.4 42 289-330 78-129 (298)
269 d1veca_ c.37.1.19 (A:) DEAD bo 58.8 1.7 0.00012 40.3 1.8 50 254-305 3-55 (206)
270 d2olra1 c.91.1.1 (A:228-540) P 57.9 1.8 0.00013 43.1 2.0 16 292-307 16-31 (313)
271 d2afhe1 c.37.1.10 (E:1-289) Ni 57.6 4 0.00029 39.1 4.5 32 293-324 5-39 (289)
272 d1g7sa4 c.37.1.8 (A:1-227) Ini 57.2 2.8 0.0002 39.1 3.2 26 288-314 4-29 (227)
273 d1htaa_ a.22.1.2 (A:) Archaeal 56.8 5.7 0.00041 30.0 4.4 32 465-496 36-67 (68)
274 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 56.7 2 0.00014 45.6 2.1 20 292-311 26-46 (623)
275 d2c78a3 c.37.1.8 (A:9-212) Elo 55.7 2.5 0.00018 39.0 2.5 23 290-312 3-25 (204)
276 d1f9va_ c.37.1.9 (A:) Kinesin 53.7 3.3 0.00024 41.4 3.2 70 253-346 51-120 (342)
277 d1ii2a1 c.91.1.1 (A:201-523) P 53.1 2.5 0.00018 42.3 2.0 16 292-307 16-31 (323)
278 d1g8fa3 c.37.1.15 (A:390-511) 52.1 3.7 0.00027 35.3 2.7 33 292-324 8-45 (122)
279 d1puja_ c.37.1.8 (A:) Probable 51.5 6.2 0.00045 37.8 4.8 24 291-314 113-136 (273)
280 d1bg2a_ c.37.1.9 (A:) Kinesin 51.4 2.5 0.00018 41.9 1.8 16 292-307 78-93 (323)
281 d1g5ta_ c.37.1.11 (A:) ATP:cor 49.9 47 0.0034 29.1 10.2 29 293-321 5-36 (157)
282 d1c9ka_ c.37.1.11 (A:) Adenosy 48.9 4.8 0.00035 36.7 3.2 31 293-324 2-32 (180)
283 d1wxqa1 c.37.1.8 (A:1-319) GTP 48.9 3.8 0.00027 40.0 2.7 30 293-322 3-36 (319)
284 d1h75a_ c.47.1.1 (A:) Glutared 48.4 22 0.0016 26.8 6.8 33 293-325 3-35 (76)
285 d1jwyb_ c.37.1.8 (B:) Dynamin 48.3 3.6 0.00026 39.9 2.4 26 287-313 22-47 (306)
286 d1ni3a1 c.37.1.8 (A:11-306) Yc 47.9 2.4 0.00017 41.4 0.9 31 293-323 13-48 (296)
287 d1goja_ c.37.1.9 (A:) Kinesin 46.2 5.4 0.00039 39.9 3.4 16 292-307 82-97 (354)
288 g1ii8.1 c.37.1.12 (A:,B:) Rad5 46.0 13 0.00098 34.7 6.3 60 346-426 299-358 (369)
289 d1cy5a_ a.77.1.3 (A:) Apoptoti 45.5 17 0.0012 28.7 5.9 25 674-698 22-46 (93)
290 d2jdia3 c.37.1.11 (A:95-379) C 42.6 5.3 0.00038 39.1 2.5 21 293-313 71-91 (285)
291 d1fx0a3 c.37.1.11 (A:97-372) C 42.5 11 0.0008 36.5 4.9 20 293-312 70-89 (276)
292 d1lkxa_ c.37.1.9 (A:) Myosin S 42.4 10 0.00074 41.4 5.2 23 291-313 87-109 (684)
293 d1jala1 c.37.1.8 (A:1-278) Ych 42.4 3.9 0.00028 39.4 1.5 31 292-322 4-38 (278)
294 d1hfca_ d.92.1.11 (A:) Fibrobl 42.3 4.1 0.0003 35.1 1.5 14 511-524 105-118 (157)
295 d1e69a_ c.37.1.12 (A:) Smc hea 41.6 22 0.0016 33.5 7.0 49 346-409 238-286 (308)
296 d1r7ha_ c.47.1.1 (A:) Glutared 41.2 34 0.0025 25.3 6.9 33 293-325 3-35 (74)
297 d1d0xa2 c.37.1.9 (A:2-33,A:80- 40.6 12 0.00085 41.2 5.3 23 291-313 126-148 (712)
298 d1n0ua2 c.37.1.8 (A:3-343) Elo 40.5 6.1 0.00044 39.6 2.7 25 291-315 18-42 (341)
299 d1mmqa_ d.92.1.11 (A:) Matrily 39.9 4.6 0.00034 35.4 1.5 12 513-524 115-126 (166)
300 d1hy7a_ d.92.1.11 (A:) Stromel 39.8 4.7 0.00034 35.1 1.5 12 513-524 114-125 (168)
301 d1i76a_ d.92.1.11 (A:) Neutrop 39.7 4.7 0.00034 35.2 1.5 12 513-524 113-124 (163)
302 d1dgna_ a.77.1.3 (A:) Iceberg 39.7 9.7 0.00071 30.2 3.4 26 673-698 20-45 (89)
303 d1sdma_ c.37.1.9 (A:) Kinesin 39.6 6.3 0.00046 39.6 2.6 16 292-307 77-92 (364)
304 d1rm8a_ d.92.1.11 (A:) Matrix 39.5 4.7 0.00035 34.8 1.5 13 512-524 117-129 (169)
305 d1ku5a_ a.22.1.2 (A:) Archaeal 39.5 11 0.00081 28.1 3.5 31 465-495 35-65 (66)
306 d1xuca1 d.92.1.11 (A:104-272) 39.4 4.8 0.00035 35.2 1.5 13 512-524 113-125 (169)
307 d1r0ka2 c.2.1.3 (A:3-126,A:265 37.6 20 0.0015 31.3 5.5 57 290-358 2-60 (150)
308 d1x88a1 c.37.1.9 (A:18-362) Ki 37.5 8.4 0.00061 38.2 3.2 17 292-308 83-99 (345)
309 d1qiba_ d.92.1.11 (A:) Gelatin 37.5 5.4 0.00039 34.4 1.5 13 512-524 109-121 (161)
310 d1w7ja2 c.37.1.9 (A:63-792) My 37.4 14 0.001 40.6 5.3 24 290-313 94-117 (730)
311 d2mysa2 c.37.1.9 (A:4-33,A:80- 37.3 13 0.00096 41.2 5.2 22 291-312 124-145 (794)
312 d1kk8a2 c.37.1.9 (A:1-28,A:77- 37.0 12 0.0009 41.4 4.8 22 291-312 122-143 (789)
313 d1br2a2 c.37.1.9 (A:80-789) My 36.8 15 0.0011 40.3 5.3 23 291-313 92-114 (710)
314 d1y93a1 d.92.1.11 (A:106-263) 36.7 4.7 0.00034 34.7 1.0 13 512-524 107-119 (158)
315 d1w1wa_ c.37.1.12 (A:) Smc hea 36.4 13 0.00097 36.5 4.6 50 347-410 352-401 (427)
316 d1w36b1 c.37.1.19 (B:1-485) Ex 35.6 7.5 0.00054 39.1 2.5 22 291-312 17-39 (485)
317 d1hv5a_ d.92.1.11 (A:) Stromel 35.2 5.1 0.00037 35.1 1.0 12 513-524 114-125 (162)
318 d2ovxa1 d.92.1.11 (A:110-443) 34.9 5.3 0.00038 34.5 1.0 12 513-524 112-123 (159)
319 d2ncda_ c.37.1.9 (A:) Kinesin 34.7 8.4 0.00061 38.7 2.6 16 292-307 127-142 (368)
320 d1g41a_ c.37.1.20 (A:) HslU {H 34.4 39 0.0029 34.4 8.1 83 351-437 251-345 (443)
321 d1f5na2 c.37.1.8 (A:7-283) Int 34.3 10 0.00075 36.5 3.2 23 292-314 34-56 (277)
322 d2qn6a3 c.37.1.8 (A:2-206) Ini 33.4 11 0.00083 33.9 3.2 24 289-312 7-30 (205)
323 d2huec1 a.22.1.1 (C:20-101) Hi 33.4 12 0.00085 29.6 2.8 32 465-496 42-73 (82)
324 d1rifa_ c.37.1.23 (A:) DNA hel 32.6 14 0.001 35.5 3.8 37 292-328 130-171 (282)
325 d1ry6a_ c.37.1.9 (A:) Kinesin 32.1 9.2 0.00067 37.7 2.4 17 292-308 87-103 (330)
326 d2axpa1 c.37.1.1 (A:2-165) Hyp 31.0 68 0.005 26.4 7.3 60 293-358 3-62 (164)
327 d1d2ea3 c.37.1.8 (A:55-250) El 30.4 12 0.00088 34.0 2.8 22 291-312 4-25 (196)
328 d1jnya3 c.37.1.8 (A:4-227) Elo 29.7 13 0.00097 34.1 3.0 26 291-316 4-29 (224)
329 d2bykb1 a.22.1.3 (B:11-99) Chr 29.6 30 0.0022 27.3 4.8 32 466-497 35-66 (89)
330 d1r5ba3 c.37.1.8 (A:215-459) E 29.6 14 0.001 34.7 3.2 28 288-315 22-49 (245)
331 d1n1ja_ a.22.1.3 (A:) Nuclear 29.1 33 0.0024 26.8 4.9 32 466-497 38-69 (87)
332 d2zfia1 c.37.1.9 (A:4-352) Kin 28.8 11 0.00082 37.3 2.4 41 292-347 89-129 (349)
333 d1v8ka_ c.37.1.9 (A:) Kinesin 28.3 11 0.00081 37.6 2.3 16 292-307 116-131 (362)
334 d1tafb_ a.22.1.3 (B:) TAF(II)6 27.4 36 0.0026 25.9 4.6 31 465-495 39-69 (70)
335 d1kapp2 d.92.1.6 (P:1-246) Met 26.4 10 0.00075 35.7 1.5 12 513-524 171-182 (246)
336 d1zunb3 c.37.1.8 (B:16-237) Su 26.3 20 0.0014 33.2 3.5 25 292-316 11-35 (222)
337 d1f60a3 c.37.1.8 (A:2-240) Elo 25.2 20 0.0015 33.5 3.4 26 291-316 7-32 (239)
338 d1fova_ c.47.1.1 (A:) Glutared 25.0 98 0.0071 23.0 7.1 34 292-325 2-35 (82)
339 d1n1jb_ a.22.1.3 (B:) Nuclear 24.7 34 0.0025 26.0 4.2 31 466-496 35-65 (78)
340 d1g9ka2 d.92.1.6 (A:3-244) Met 24.6 12 0.00085 35.0 1.5 13 512-524 161-173 (242)
341 d1h3ob_ a.22.1.3 (B:) TAF(II)- 24.4 56 0.0041 25.0 5.3 64 429-497 6-69 (74)
342 d1sata2 d.92.1.6 (A:4-246) Met 23.6 13 0.00091 35.0 1.5 12 513-524 168-179 (243)
343 d1k7ia2 d.92.1.6 (A:18-258) Me 23.5 13 0.00092 34.9 1.5 12 513-524 166-177 (241)
344 d1k6ka_ a.174.1.1 (A:) N-termi 23.2 34 0.0025 28.4 4.2 31 464-494 4-34 (142)
345 d1f1ea_ a.22.1.2 (A:) Archaeal 23.1 37 0.0027 29.4 4.5 64 430-499 83-146 (151)
346 d1rw1a_ c.47.1.12 (A:) Hypothe 22.7 82 0.006 25.3 6.6 47 293-344 2-48 (114)
347 d1kjwa2 c.37.1.1 (A:526-724) G 21.6 30 0.0022 31.1 3.8 25 288-315 7-31 (199)
348 d1kk1a3 c.37.1.8 (A:6-200) Ini 21.2 24 0.0018 31.2 2.9 21 292-312 7-27 (195)
349 d1jfib_ a.22.1.3 (B:) Negative 20.1 58 0.0042 27.6 5.1 61 432-497 10-70 (135)
No 1
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=4.4e-49 Score=408.30 Aligned_cols=253 Identities=68% Similarity=1.100 Sum_probs=238.2
Q ss_pred ccCCCCCccccccchHHHHHHHHHHHHhcCchhhhhccCcCCceEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHH
Q 005003 249 EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVE 328 (720)
Q Consensus 249 ~~~~~~~f~dI~G~de~k~eL~eiv~~l~~p~~~~~~g~~~prgVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~ 328 (720)
+..+.+||+||+|++++|+++.+++.++++++.|+++|.+.|+|+|||||||||||++|+++|++++.|+++++++++.+
T Consensus 4 ~~~~~~t~~Di~Gl~~~k~~l~e~v~~~~~~~~~~~~g~~~~~~iLL~GppGtGKT~la~~iA~~~~~~~~~i~~~~l~~ 83 (256)
T d1lv7a_ 4 EDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVE 83 (256)
T ss_dssp ECSSCCCGGGSCSCHHHHHHTHHHHHHHHCGGGC-----CCCCEEEEECCTTSCHHHHHHHHHHHHTCCEEEECSCSSTT
T ss_pred CCCCCCCHHHHhchHHHHHHHHHHHHHHHCHHHHHHcCCCCCCeEEeeCCCCCCccHHHHHHHHHcCCCEEEEEhHHhhh
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhchHHHHHHHHHHHhcCCeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhhhcCccCCCcEEEEEEeCCCCcc
Q 005003 329 MFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADIL 408 (720)
Q Consensus 329 ~~~G~~~~~vr~lF~~A~~~~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~ldg~~~~~~ViVIaaTN~p~~L 408 (720)
.|+|+++..++.+|+.|+.++||||||||+|.++.+|+....+.++...+++++||.++|++..+.+|+||||||+|+.+
T Consensus 84 ~~~g~~~~~l~~~f~~A~~~~P~il~iDeiD~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~~~v~vIatTn~~~~l 163 (256)
T d1lv7a_ 84 MFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVL 163 (256)
T ss_dssp SCCCCCHHHHHHHHHHHHTTCSEEEEETTHHHHTCCCSTTSCCTTCHHHHHHHHHHHHHHTCCSSSCEEEEEEESCTTTS
T ss_pred cchhHHHHHHHHHHHHHHHcCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCCCCCEEEEEeCCCcccC
Confidence 99999999999999999999999999999999999887776677778888999999999999888999999999999999
Q ss_pred chhhcCCCcccceeeecCCCHHHHHHHHHHhhcCCCCcccccHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhCCCccCHH
Q 005003 409 DSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAILAGRRGKAAISSK 488 (720)
Q Consensus 409 D~ALlrpgRFdr~I~i~~Pd~~eR~~IL~~~l~~~~l~~dvdl~~LA~~t~G~SgadL~~lv~eAa~~A~r~~~~~It~~ 488 (720)
|++++||||||+.|+|++|+.++|.+|++.++++..+..++++..+++.|.|||++||.++|++|+..|.++++..|+.+
T Consensus 164 d~al~R~gRfd~~i~i~~P~~~~R~~il~~~l~~~~~~~~~~~~~la~~t~G~s~adi~~l~~~A~~~a~~~~~~~i~~~ 243 (256)
T d1lv7a_ 164 DPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMV 243 (256)
T ss_dssp CGGGGSTTSSCEEEECCCCCHHHHHHHHHHHHTTSCBCTTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHTTCSSBCHH
T ss_pred CHhHcCCCCCCEEEECCCcCHHHHHHHHHHhccCCCcCcccCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHcCCCccCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCc
Q 005003 489 EIDDSIDRIVAGM 501 (720)
Q Consensus 489 dl~~Al~~v~~~~ 501 (720)
||++|+++++.|.
T Consensus 244 d~~~Al~rv~~g~ 256 (256)
T d1lv7a_ 244 EFEKAKDKIMMGL 256 (256)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHhcCC
Confidence 9999999998773
No 2
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=4.9e-48 Score=398.43 Aligned_cols=245 Identities=67% Similarity=1.119 Sum_probs=228.8
Q ss_pred cCCCCCccccccchHHHHHHHHHHHHhcCchhhhhccCcCCceEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHHH
Q 005003 250 PNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM 329 (720)
Q Consensus 250 ~~~~~~f~dI~G~de~k~eL~eiv~~l~~p~~~~~~g~~~prgVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~~ 329 (720)
..|+++|+||+|++++|++|++++.++.+|+.|.++|.+.|+|+|||||||||||++|+++|+++++|++.++++++.+.
T Consensus 2 ~~p~~~~~di~G~~~~k~~l~~~i~~l~~~~~~~~~g~~~~~giLl~GppGtGKT~la~aia~~~~~~~~~i~~~~l~~~ 81 (247)
T d1ixza_ 2 EAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEM 81 (247)
T ss_dssp CCCSCCGGGCCSCHHHHHHHHHHHHHHHCHHHHHHTTCCCCSEEEEECCTTSSHHHHHHHHHHHTTCCEEEEEHHHHHHS
T ss_pred CCCCCcHHHHccHHHHHHHHHHHHHHHHCHHHHHHcCCCCCceEEEecCCCCChhHHHHHHHHHcCCCEEEEEhHHhhhc
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhchHHHHHHHHHHHhcCCeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhhhcCccCCCcEEEEEEeCCCCccc
Q 005003 330 FVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILD 409 (720)
Q Consensus 330 ~~G~~~~~vr~lF~~A~~~~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~ldg~~~~~~ViVIaaTN~p~~LD 409 (720)
|+|.+.+.++.+|+.|+.++||||||||+|.++.+|+....+.+....+++++|+.+||++..+.+|+||+|||+|+.+|
T Consensus 82 ~~g~~~~~l~~~f~~a~~~~p~Ii~iDeid~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~~~vivi~tTn~~~~ld 161 (247)
T d1ixza_ 82 FVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFEKDTAIVVMAATNRPDILD 161 (247)
T ss_dssp CTTHHHHHHHHHHHHHTTSSSEEEEEETHHHHHC---------CHHHHHHHHHHHHHHHTCCTTCCEEEEEEESCGGGSC
T ss_pred cccHHHHHHHHHHHHHHHcCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCCCCCEEEEEeCCCccccC
Confidence 99999999999999999999999999999999998877666677788889999999999998889999999999999999
Q ss_pred hhhcCCCcccceeeecCCCHHHHHHHHHHhhcCCCCcccccHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhCCCccCHHH
Q 005003 410 SALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAILAGRRGKAAISSKE 489 (720)
Q Consensus 410 ~ALlrpgRFdr~I~i~~Pd~~eR~~IL~~~l~~~~l~~dvdl~~LA~~t~G~SgadL~~lv~eAa~~A~r~~~~~It~~d 489 (720)
++++||||||..|+|++|+.++|.+||+.++.+.+...+++++.+++.|+||+++||.++|++|++.|.+++++.|+++|
T Consensus 162 ~al~R~~Rf~~~i~~~~P~~~eR~~il~~~l~~~~~~~~~~~~~la~~t~g~s~~di~~lv~~A~l~a~~~~~~~i~~~d 241 (247)
T d1ixza_ 162 PALLRPGRFDRQIAIDAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKD 241 (247)
T ss_dssp GGGGSTTSSCEEEECCSCCHHHHHHHHHHHHTTSCBCTTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHTTCSSBCHHH
T ss_pred HhHcCCCCCcEEEEECCcCHHHHHHHHHHHhcccCCccccCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHcCCCCcCHHH
Confidence 99999999999999999999999999999999998889999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 005003 490 IDDSI 494 (720)
Q Consensus 490 l~~Al 494 (720)
|++|+
T Consensus 242 ~~~A~ 246 (247)
T d1ixza_ 242 LEEAA 246 (247)
T ss_dssp HHHHT
T ss_pred HHHhh
Confidence 99985
No 3
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=2e-44 Score=373.27 Aligned_cols=239 Identities=44% Similarity=0.720 Sum_probs=221.5
Q ss_pred CCccccccchHHHHHHHHHHHH-hcCchhhhhccCcCCceEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHHHHhh
Q 005003 254 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVG 332 (720)
Q Consensus 254 ~~f~dI~G~de~k~eL~eiv~~-l~~p~~~~~~g~~~prgVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~~~~G 332 (720)
++|+||+|++.+|+++++.+.+ +++|+.|.+.|.++|+|+|||||||||||++|+++|++++.|++.++++++...+.|
T Consensus 1 ~~~~dv~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~l~~ala~~~~~~~~~i~~~~l~~~~~g 80 (258)
T d1e32a2 1 VGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAG 80 (258)
T ss_dssp CCGGGCCSCSHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCTTSSHHHHHHHHHHHTTCEEEEECHHHHTTSCTT
T ss_pred CChhhhccHHHHHHHHHHHHHHHhcCHHHHHhCCCCCCceeEEecCCCCCchHHHHHHHHHhCCeEEEEEchhhcccccc
Confidence 5899999999999999999886 999999999999999999999999999999999999999999999999999999999
Q ss_pred hchHHHHHHHHHHHhcCCeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhhhcCccCCCcEEEEEEeCCCCccchhh
Q 005003 333 VGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSAL 412 (720)
Q Consensus 333 ~~~~~vr~lF~~A~~~~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~ldg~~~~~~ViVIaaTN~p~~LD~AL 412 (720)
.+...++.+|+.|+.++||||||||+|.++.+|..+. +.....+++.++..+++...+.+|+||+|||+|+.+|+++
T Consensus 81 ~~~~~l~~~f~~A~~~~p~il~iDeid~l~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~vlvi~tTn~~~~ld~al 157 (258)
T d1e32a2 81 ESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTH---GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPAL 157 (258)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCC---CTTHHHHHHHHHHHHHTCCCSSCEEEEEEESCGGGSCGGG
T ss_pred cHHHHHHHHHHHHHhcCCeEEEehhhhhhccCCCCCC---CchHHHHHHHhccccccccccCCccEEEeCCCccccchhh
Confidence 9999999999999999999999999999998876532 3445678888898899888889999999999999999999
Q ss_pred cCCCcccceeeecCCCHHHHHHHHHHhhcCCCCcccccHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhCC----------
Q 005003 413 LRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAILAGRRGK---------- 482 (720)
Q Consensus 413 lrpgRFdr~I~i~~Pd~~eR~~IL~~~l~~~~l~~dvdl~~LA~~t~G~SgadL~~lv~eAa~~A~r~~~---------- 482 (720)
+||||||+.|++++|+.++|.+||+.++++..+..++++..+|+.|.|||++||.++|++|++.|.+++.
T Consensus 158 ~r~gRfd~~i~~~~P~~~~R~~il~~~l~~~~~~~~~~~~~la~~t~G~s~adl~~lv~~A~~~a~~~~~~~~~~~~~~~ 237 (258)
T d1e32a2 158 RRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 237 (258)
T ss_dssp TSTTSSCEEEECCCCCHHHHHHHHHHTTTTSCBCTTCCHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHCCCSSCC
T ss_pred hhcccccceeECCCCCHHHHHHHhhhhccCcccccccchhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccccchhhhhh
Confidence 9999999999999999999999999999999888999999999999999999999999999999987642
Q ss_pred -------CccCHHHHHHHHH
Q 005003 483 -------AAISSKEIDDSID 495 (720)
Q Consensus 483 -------~~It~~dl~~Al~ 495 (720)
..|+++||+.|+.
T Consensus 238 ~~~~~~~~~it~~Df~~AL~ 257 (258)
T d1e32a2 238 DAEVMNSLAVTMDDFRWALS 257 (258)
T ss_dssp BHHHHHHCCBCHHHHHHHHT
T ss_pred hhhhhccCccCHHHHHHHhC
Confidence 2378888888774
No 4
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=2.6e-42 Score=358.87 Aligned_cols=230 Identities=43% Similarity=0.778 Sum_probs=208.2
Q ss_pred CCCCccccccchHHHHHHHHHHH-HhcCchhhhhccCcCCceEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHHHH
Q 005003 252 TGVTFDDVAGVDEAKQDFMEVVE-FLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMF 330 (720)
Q Consensus 252 ~~~~f~dI~G~de~k~eL~eiv~-~l~~p~~~~~~g~~~prgVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~~~ 330 (720)
|.++|+||+|++++|+++.+.+. ++.+|+.|.+.|..+|+|+|||||||||||++|+++|+++++||++++++++...+
T Consensus 2 p~~~f~di~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~Gp~GtGKT~l~~ala~~~~~~~~~~~~~~l~~~~ 81 (265)
T d1r7ra3 2 PQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMW 81 (265)
T ss_dssp CCCSCSSCSSSSCCCCHHHHHTHHHHHCHHHHHHCCCCCCCEEEEBCCTTSSHHHHHHHHHHHTTCEEEEECHHHHHTSC
T ss_pred CCCCHHHhcCHHHHHHHHHHHHHHHhhCHHHHHhCCCCCCCeEEEECCCCCcchhHHHHHHHHhCCcEEEEEHHHhhhcc
Confidence 57899999999999999999886 48899999999999999999999999999999999999999999999999999999
Q ss_pred hhhchHHHHHHHHHHHhcCCeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhhhcCccCCCcEEEEEEeCCCCccch
Q 005003 331 VGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDS 410 (720)
Q Consensus 331 ~G~~~~~vr~lF~~A~~~~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~ldg~~~~~~ViVIaaTN~p~~LD~ 410 (720)
.|.....++.+|..|+.++||||||||+|.++.+++...++...+..++++.++..++++..+.+++||+|||+++.||+
T Consensus 82 ~~~~~~~l~~~f~~A~~~~p~il~ideid~l~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~v~vi~ttn~~~~ld~ 161 (265)
T d1r7ra3 82 FGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDP 161 (265)
T ss_dssp TTTHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCC------CCEEEECCBSCTTTSC
T ss_pred ccchHHHHHHHHHHHHhcCCcceeHHhhhhccccCCCcCCCCcHHHHHHHHHHHHHhhCcCCCCCEEEEEeCCCchhCCH
Confidence 99999999999999999999999999999999887665555566677899999999999988889999999999999999
Q ss_pred hhcCCCcccceeeecCCCHHHHHHHHHHhhcCCCCcccccHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhC
Q 005003 411 ALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAILAGRRG 481 (720)
Q Consensus 411 ALlrpgRFdr~I~i~~Pd~~eR~~IL~~~l~~~~l~~dvdl~~LA~~t~G~SgadL~~lv~eAa~~A~r~~ 481 (720)
+++|||||+..|+++.|+.++|.+||+.++++.....+++++.+++.|.|||++||.++|++|...|.++.
T Consensus 162 al~r~gRf~~~i~~~~p~~~~R~~il~~~l~~~~~~~~~~l~~la~~t~g~s~~di~~lv~~A~~~A~~~~ 232 (265)
T d1r7ra3 162 AILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRES 232 (265)
T ss_dssp GGGSSTTSEEEEECCCCCCHHHHHHHHHHTTCC----CCCCHHHHHHHCSSCCHHHHHHHHHHHHHHHHHC
T ss_pred HHhCCCCccEEEEecchHHHHHHHHHHHHhccCCchhhhhHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999888889999999999999999999999999999998765
No 5
>d2di4a1 a.269.1.1 (A:406-607) Cell division protein FtsH, C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=100.00 E-value=1.5e-41 Score=339.24 Aligned_cols=194 Identities=37% Similarity=0.593 Sum_probs=159.6
Q ss_pred ccCCccchhhHHHHHHHHHHhhcCCCCCcceeeeecCCccceeEEeecCCCCCCccHHHHHHHHHHhhchhhhhhhhcCC
Q 005003 507 TDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGE 586 (720)
Q Consensus 507 ~~~~~k~~vA~hEaGhAvv~~~l~~~~~v~kvti~prg~a~G~~~~~p~~~~~~~t~~~l~~~i~~~lgGraAEe~~fg~ 586 (720)
+++++|+++||||+||||+++++++.++|.+|||.|||.+.|+.++.|.++....||.+++++|+++|||||||+++||+
T Consensus 2 ls~~ek~~vA~HEAGHAvva~~l~~~~~v~~vtI~prg~~~g~~~~~~~~~~~~~t~~~l~~~i~v~LgGraAE~i~~g~ 81 (202)
T d2di4a1 2 ISPKEKEKIAIHEAGHALMGLVSDDDDKVHKISIIPRGMALGVTQQLPIEDKHIYDKKDLYNKILVLLGGRAAEEVFFGK 81 (202)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHCSSCCCCCCEECC----------------CCCCBHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCCceeEEEEecCCccccccccCcccccchhhHHHHHHHHHHHHhhhhcceeeecC
Confidence 35678999999999999999999999999999999999999999999988999999999999999999999999999998
Q ss_pred CCcccCcchHHHHHHHHHHHHHHhcCCCC-CCCccccCCCCchhhHHhhhhcccccHHHHHHHHHHHHHHHHHHHHHHHH
Q 005003 587 PEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALS 665 (720)
Q Consensus 587 ~~~t~Ga~~Dl~~At~lA~~mv~~~Gm~~-~g~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~id~ev~~il~~ay~~A~~ 665 (720)
+++|+|+++||++||++|+.||++||||+ +|++.+.....+ +..++....++|++++..||+||+++|++||++|++
T Consensus 82 ~~~~~g~~~dl~~At~~A~~~v~~~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~s~~~~~~id~ev~~ll~~a~~~a~~ 159 (202)
T d2di4a1 82 DGITTGAENDLQRATDLAYRMVSMWGMSDKVGPIAIRRVANP--FLGGMTTAVDTSPDLLREIDEEVKRIITEQYEKAKA 159 (202)
T ss_dssp HHCCGGGHHHHHHHHHHHHHHHHTSCCCTTTCSCCCCC------------CCCSCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCccchHHHHHHHHHHHHHhhCcccccchhhhcccccc--hhhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 77899999999999999999999999997 999888763322 333445567899999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHhcccCHHHHHHHHhcccCC
Q 005003 666 QIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEI 702 (720)
Q Consensus 666 iL~~~r~~l~~la~~Lle~etL~g~ei~~il~~~~~~ 702 (720)
||++||+.|++||++|+++|||+++||++|++.+...
T Consensus 160 iL~~~~~~l~~la~~Lle~etL~~~ei~~il~~~~~~ 196 (202)
T d2di4a1 160 IVEEYKEPLKAVVKKLLEKETITCEEFVEVFKLYGIE 196 (202)
T ss_dssp HHHHTHHHHHHHHHHHHHHSEECHHHHHHHHHHHTCC
T ss_pred HHHHhHHHHHHHHHHHHHhCccCHHHHHHHHHHCCCC
Confidence 9999999999999999999999999999999988633
No 6
>d2ce7a1 a.269.1.1 (A:411-603) Cell division protein FtsH, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=100.00 E-value=1.6e-40 Score=329.58 Aligned_cols=188 Identities=43% Similarity=0.742 Sum_probs=153.2
Q ss_pred ccCCccchhhHHHHHHHHHHhhcCCCCCcceeeeecCC-ccceeEEeecCCCCCCccHHHHHHHHHHhhchhhhhhhhcC
Q 005003 507 TDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRG-QARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFG 585 (720)
Q Consensus 507 ~~~~~k~~vA~hEaGhAvv~~~l~~~~~v~kvti~prg-~a~G~~~~~p~~~~~~~t~~~l~~~i~~~lgGraAEe~~fg 585 (720)
+++++|+++||||+||||+++++++.+++.+|||.||+ .++|++++.|.++....||.+++++|+++|||||||+++||
T Consensus 2 ls~~er~~vA~HEAGHAlva~~l~~~~~i~~vsI~~r~~~~~g~~~~~~~~~~~~~t~~~l~~~i~v~LaGraAE~~~~g 81 (193)
T d2ce7a1 2 ISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIPRGYKALGYTLHLPEEDKYLVSRNELLDKLTALLGGRAAEEVVFG 81 (193)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHSTTCCCCCEEECC-----------------CCSCBHHHHHHHHHHHTHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCCceeEEEEecCccCCCceeecCCccccccCcHHHHHHHHHHHHHHHHHHHHHhC
Confidence 46778999999999999999999999999999999997 57899999998888899999999999999999999999999
Q ss_pred CCCcccCcchHHHHHHHHHHHHHHhcCCCC-CCCccccCCCCchhhH-HhhhhcccccHHHHHHHHHHHHHHHHHHHHHH
Q 005003 586 EPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSGDVI-MRMMARNSMSEKLAEDIDAAVKRLSDRAYEIA 663 (720)
Q Consensus 586 ~~~~t~Ga~~Dl~~At~lA~~mv~~~Gm~~-~g~~~~~~~~~~g~~~-~~~~~~~~~s~~~~~~id~ev~~il~~ay~~A 663 (720)
+ +|+|+++||++||++|+.||..||||+ +||+.+....+. .++ .......++|+.+...+|++|++++++||++|
T Consensus 82 ~--~s~Ga~~Dl~~At~lA~~~v~~~Gm~~~~g~~~~~~~~~~-~~~~~~~~~~~~~s~~~~~~id~ev~~ll~~a~~~a 158 (193)
T d2ce7a1 82 D--VTSGAANDIERATEIARNMVCQLGMSEELGPLAWGKEEQE-VFLGKEITRLRNYSEEVASKIDEEVKKIVTNCYERA 158 (193)
T ss_dssp S--CCGGGHHHHHHHHHHHHHHHHTSCCCTTTCSCCCCC--------------CCCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C--CCCCccCcHHHHHHHHHHHHHhhCcCCCcCceeeccCCcc-ccccccccccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 699999999999999999999999997 999998763221 234 23345667999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHhcccCHHHHHHHHh
Q 005003 664 LSQIRNNREAIDKIVEVLLEKETMSGDEFRAILS 697 (720)
Q Consensus 664 ~~iL~~~r~~l~~la~~Lle~etL~g~ei~~il~ 697 (720)
+++|++||+.|++||++|+++|+|+++||++|++
T Consensus 159 ~~iL~~~~~~l~~la~~Lle~e~L~g~ei~~il~ 192 (193)
T d2ce7a1 159 KEIIRKYRKQLDNIVEILLEKETIEGDELRRILS 192 (193)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHSEEEHHHHHHHTC
T ss_pred HHHHHHhHHHHHHHHHHHHHhCeeCHHHHHHHHc
Confidence 9999999999999999999999999999999985
No 7
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=99.96 E-value=5.8e-34 Score=301.83 Aligned_cols=206 Identities=18% Similarity=0.219 Sum_probs=164.6
Q ss_pred cCchhhhhccCcCCceEEE-EccCCChHHHHHHHHHHhcC--CCEEEEechhhHHHHhhhchHHHHHHHHHHHhcCCeEE
Q 005003 277 KKPERFTAIGARIPKGVLL-VGPPGTGKTLLAKAIAGEAG--VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIV 353 (720)
Q Consensus 277 ~~p~~~~~~g~~~prgVLL-~GPPGTGKT~LArAlA~e~g--~pf~~vs~s~~~~~~~G~~~~~vr~lF~~A~~~~P~IL 353 (720)
..|..++.+|.+.|+|++| |||||||||++|+++|++++ .||+.++++++.++|+|+++++++++|+.|+. ||||
T Consensus 109 ~~~~~~~~~~~~~~~g~~l~~G~pG~GKT~la~ala~~~~~~~~~~~~~~~~~~~~~~G~~e~~~~~~f~~a~~--~~il 186 (321)
T d1w44a_ 109 CSPVVAEFGGHRYASGMVIVTGKGNSGKTPLVHALGEALGGKDKYATVRFGEPLSGYNTDFNVFVDDIARAMLQ--HRVI 186 (321)
T ss_dssp BCCEEEEETTEEEESEEEEEECSSSSCHHHHHHHHHHHHHTTSCCEEEEBSCSSTTCBCCHHHHHHHHHHHHHH--CSEE
T ss_pred cchHHHHHhhcccCCceEEEECCCCccHHHHHHHHHHHhcCCCCeEEEEhhHhhhcccchHHHHHHHHHHHHhh--ccEE
Confidence 4677888899999999776 89999999999999999975 89999999999999999999999999999985 7999
Q ss_pred EEccchhcccccCCCCCCCChHHHHHHHHHHhhhcCccCCCcEEEEEEeCC---CCccchhhcCCCcccceeeecCCCHH
Q 005003 354 FVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNR---ADILDSALLRPGRFDRQVTVDVPDIR 430 (720)
Q Consensus 354 fIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~ldg~~~~~~ViVIaaTN~---p~~LD~ALlrpgRFdr~I~i~~Pd~~ 430 (720)
||||||+++++|+.+.+ ....++++|++|.+||++..+.+|+||||||+ ++.+|++++||||||+.+.++.||.+
T Consensus 187 f~DEid~~~~~r~~~~~--~~~~~r~v~~lL~e~dg~~~~~~v~viaatN~~~~~~~i~~~~~r~~Rf~~~v~v~~pd~~ 264 (321)
T d1w44a_ 187 VIDSLKNVIGAAGGNTT--SGGISRGAFDLLSDIGAMAASRGCVVIASLNPTSNDDKIVELVKEASRSNSTSLVISTDVD 264 (321)
T ss_dssp EEECCTTTC-------------CCHHHHHHHHHHHHHHHHHTCEEEEECCCCCCCHHHHHHHHHHHHHSCSEEEEECSST
T ss_pred EeehhhhhccccccCCC--CCcchhhhhhhhhhccccccCCCeEEEEeCCCcccccchhhhhhccCcccceeecCCCChH
Confidence 99999999998865433 33345799999999999999889999999996 34577888999999999999999999
Q ss_pred HHHHHHHHhhcCCCCcccccHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhCCCccCHHHHHHHHHHHHcCcc
Q 005003 431 GRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGME 502 (720)
Q Consensus 431 eR~~IL~~~l~~~~l~~dvdl~~LA~~t~G~SgadL~~lv~eAa~~A~r~~~~~It~~dl~~Al~~v~~~~~ 502 (720)
+|.+|++.+..+... +++++.+.+++++..+.+..+..+++.+..+|+++++.+.+
T Consensus 265 ~r~~il~~~~~~~~~----------------~~~~l~~~~~~~a~la~~~~~~~~~~~~~~~Ai~~via~~e 320 (321)
T d1w44a_ 265 GEWQVLTRTGEGLQR----------------LTHTLQTSYGEHSVLTIHTSKQSGGKQASGKAIQTVIKNDE 320 (321)
T ss_dssp TEEEEEEECBTTCCE----------------EEEEEEEEECGGGCEEECCC------CEECHHHHHHHHHTT
T ss_pred HHHHHHHHhccCccc----------------cchhhhhccCHHHHHHHHhccccchhhhHHHHHHHHHcCCC
Confidence 999999877665532 23455666777777777778888888888899988877653
No 8
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=99.92 E-value=3.1e-25 Score=227.13 Aligned_cols=193 Identities=24% Similarity=0.330 Sum_probs=141.1
Q ss_pred ccccccchHHHH----HHHHHHHHhcCchhhhhccCcCCceEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHHHHh
Q 005003 256 FDDVAGVDEAKQ----DFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFV 331 (720)
Q Consensus 256 f~dI~G~de~k~----eL~eiv~~l~~p~~~~~~g~~~prgVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~~~~ 331 (720)
.+.++|..+..+ +...+++.+++++ ..+|++||||||||||||++|+++|+++++||+.+++++....+.
T Consensus 8 ~~~~i~~~~~i~~i~~~~~~~~~~~~~~~------~~p~~~vLL~GppGtGKT~la~alA~~~~~~~~~i~~~~~~~g~~ 81 (246)
T d1d2na_ 8 MNGIIKWGDPVTRVLDDGELLVQQTKNSD------RTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFS 81 (246)
T ss_dssp TTCCCCCSHHHHHHHHHHHHHHHHHHHCS------SCSEEEEEEECSTTSSHHHHHHHHHHHHTCSEEEEECGGGCTTCC
T ss_pred ccCCcCcCHHHHHHHHHHHHHHHHHhccC------CCCCeEEEEECcCCCCHHHHHHHHhhccccccccccccccccccc
Confidence 345666544333 3333444444333 356789999999999999999999999999999999987665554
Q ss_pred hhc-hHHHHHHHHHHHhcCCeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhhhcCccCC-CcEEEEEEeCCCCccc
Q 005003 332 GVG-ASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGN-TGIIVIAATNRADILD 409 (720)
Q Consensus 332 G~~-~~~vr~lF~~A~~~~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~ldg~~~~-~~ViVIaaTN~p~~LD 409 (720)
+.. ...++++|+.|++.+||||||||||.+...+..+ ......++++|+..+++.... .+|+||+|||+++.+|
T Consensus 82 ~~~~~~~i~~if~~A~~~~p~il~iDEid~l~~~~~~~----~~~~~~~~~~ll~~l~~~~~~~~~v~vi~tTn~~~~ld 157 (246)
T d1d2na_ 82 ETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYVPIG----PRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQ 157 (246)
T ss_dssp HHHHHHHHHHHHHHHHTSSEEEEEECCHHHHTTCBTTT----TBCCHHHHHHHHHHTTCCCSTTCEEEEEEEESCHHHHH
T ss_pred ccchhhhhhhhhhhhhhcccceeehhhhhhHhhhcccc----cchhHHHHHHHHHHhcCCCccccceeeeeccCChhhcc
Confidence 443 4678999999999999999999999998766432 223356788899999887543 4699999999999999
Q ss_pred hhhcCCCcccceeeecCCCHHHHHHHHHHhhcCCCCcccccHHHHHHhCCCCc
Q 005003 410 SALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFS 462 (720)
Q Consensus 410 ~ALlrpgRFdr~I~i~~Pd~~eR~~IL~~~l~~~~l~~dvdl~~LA~~t~G~S 462 (720)
++.++ +||+..|++ |+..+|.++++.+.....+ .+.+...++..+.|.+
T Consensus 158 ~~~~~-~rF~~~i~~--P~~~~r~~il~~l~~~~~~-~~~~~~~i~~~~~g~~ 206 (246)
T d1d2na_ 158 EMEML-NAFSTTIHV--PNIATGEQLLEALELLGNF-KDKERTTIAQQVKGKK 206 (246)
T ss_dssp HTTCT-TTSSEEEEC--CCEEEHHHHHHHHHHHTCS-CHHHHHHHHHHHTTSE
T ss_pred chhhc-CccceEEec--CCchhHHHHHHHHHhccCC-ChHHHHHHHHHcCCCc
Confidence 76554 599988876 6766777777654332222 3344667777776643
No 9
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=99.89 E-value=1.2e-22 Score=204.29 Aligned_cols=216 Identities=22% Similarity=0.318 Sum_probs=164.2
Q ss_pred CCCccccccchHHHHHHHHHHHHhcCchhhhhccCcCCceEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHHHHhh
Q 005003 253 GVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVG 332 (720)
Q Consensus 253 ~~~f~dI~G~de~k~eL~eiv~~l~~p~~~~~~g~~~prgVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~~~~G 332 (720)
+.+|+|++|++++++++++++...+. ....+.++|||||||||||++|+++|++++.++..+++++....
T Consensus 5 P~~~~divGqe~~~~~l~~~i~~~~~-------~~~~~~~~L~~GPpGtGKT~lA~~la~~~~~~~~~~~~~~~~~~--- 74 (238)
T d1in4a2 5 PKSLDEFIGQENVKKKLSLALEAAKM-------RGEVLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVLVKQ--- 74 (238)
T ss_dssp CSSGGGCCSCHHHHHHHHHHHHHHHH-------HTCCCCCEEEESSTTSSHHHHHHHHHHHHTCCEEEEETTTCCSH---
T ss_pred CCcHHHcCChHHHHHHHHHHHHHHHh-------cCCCCCeEEEECCCCCcHHHHHHHHHhccCCCcccccCcccccH---
Confidence 45899999999999999998875322 12334589999999999999999999999999999998775432
Q ss_pred hchHHHHHHHHHHHhcCCeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhhhc--Cc-----------cCCCcEEEE
Q 005003 333 VGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMD--GF-----------EGNTGIIVI 399 (720)
Q Consensus 333 ~~~~~vr~lF~~A~~~~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~ld--g~-----------~~~~~ViVI 399 (720)
..+...+.. ....+++||||+|.+.+. .++.+...+.... .. ....++++|
T Consensus 75 ---~~~~~~~~~--~~~~~~~~ide~~~~~~~-----------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I 138 (238)
T d1in4a2 75 ---GDMAAILTS--LERGDVLFIDEIHRLNKA-----------VEELLYSAIEDFQIDIMIGKGPSAKSIRIDIQPFTLV 138 (238)
T ss_dssp ---HHHHHHHHH--CCTTCEEEEETGGGCCHH-----------HHHHHHHHHHTSCCCC---------------CCCEEE
T ss_pred ---HHHHHHHHh--hccCCchHHHHHHHhhhH-----------HHhhcccceeeeeeeeeecCcccccccccCCCCeEEE
Confidence 233344433 234589999999998422 2223332222110 00 123468999
Q ss_pred EEeCCCCccchhhcCCCcccceeeecCCCHHHHHHHHHHhhcCCCCcccc-cHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Q 005003 400 AATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADV-SLDVIAMRTPGFSGADLANLLNEAAILAG 478 (720)
Q Consensus 400 aaTN~p~~LD~ALlrpgRFdr~I~i~~Pd~~eR~~IL~~~l~~~~l~~dv-dl~~LA~~t~G~SgadL~~lv~eAa~~A~ 478 (720)
++||.+..+++++++ ||+..+.++.|+.+++..+++..........+. .++.+++.+.| +.+++.++++.++..+.
T Consensus 139 ~at~~~~~~~~~~~~--r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~s~g-d~R~ai~~l~~~~~~~~ 215 (238)
T d1in4a2 139 GATTRSGLLSSPLRS--RFGIILELDFYTVKELKEIIKRAASLMDVEIEDAAAEMIAKRSRG-TPRIAIRLTKRVRDMLT 215 (238)
T ss_dssp EEESCGGGSCHHHHT--TCSEEEECCCCCHHHHHHHHHHHHHHTTCCBCHHHHHHHHHTSTT-CHHHHHHHHHHHHHHHH
T ss_pred EecCCCcccccccee--eeeEEEEecCCCHHHHHHHHHHhhhhccchhhHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHH
Confidence 999999999999999 999999999999999999999887665554333 37778887765 78899999999988888
Q ss_pred HhCCCccCHHHHHHHHHHH
Q 005003 479 RRGKAAISSKEIDDSIDRI 497 (720)
Q Consensus 479 r~~~~~It~~dl~~Al~~v 497 (720)
..+...||.+++.++++.+
T Consensus 216 ~~~~~~it~~~~~~al~~l 234 (238)
T d1in4a2 216 VVKADRINTDIVLKTMEVL 234 (238)
T ss_dssp HHTCSSBCHHHHHHHHHHH
T ss_pred HhcCCccCHHHHHHHHHhh
Confidence 8888899999999998754
No 10
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.89 E-value=2.2e-23 Score=219.90 Aligned_cols=179 Identities=26% Similarity=0.372 Sum_probs=140.3
Q ss_pred ccccchHHHHHHHHHHHH-hcCchhhhhc-cCcCCceEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHHH--Hhhh
Q 005003 258 DVAGVDEAKQDFMEVVEF-LKKPERFTAI-GARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM--FVGV 333 (720)
Q Consensus 258 dI~G~de~k~eL~eiv~~-l~~p~~~~~~-g~~~prgVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~~--~~G~ 333 (720)
.|+|++++|+.+.+.|.. ++........ ...+|+|+||+||||||||+||+++|++++.||+.++++++.+. +.|.
T Consensus 15 ~ViGQd~A~~~l~~av~~~~~r~~~~~~~~~~~~~~~iLl~GPpG~GKT~lAkalA~~~~~~~~~i~~s~~~~~~~~~~~ 94 (309)
T d1ofha_ 15 HIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKE 94 (309)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHTTSSCHHHHHHCCCCCEEEECCTTSSHHHHHHHHHHHHTCCEEEEEGGGGSSCCSGGGS
T ss_pred cccChHHHHHHHHHHHHHHHHHhccCCCCccCCCCceEEEECCCCCCHHHHHHHHhhccccchhcccccccccceeEeee
Confidence 379999999999987742 2222111111 22367999999999999999999999999999999999999854 7888
Q ss_pred chHHHHHHHHHHHh-----cCCeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhhhcCccC--------CCcEEEEE
Q 005003 334 GASRVRDLFKKAKE-----NAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEG--------NTGIIVIA 400 (720)
Q Consensus 334 ~~~~vr~lF~~A~~-----~~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~ldg~~~--------~~~ViVIa 400 (720)
..+.++.+|..|.. .+||||||||||.+++++... ........++++||..+|+... .+++++|+
T Consensus 95 ~~~~~~~~f~~a~~~~~~~~~~~IIf~DEIdki~~~~~~~--~~~~~~~gv~~~LL~~~dg~~~~~~~~~i~~s~ilfi~ 172 (309)
T d1ofha_ 95 VDSIIRDLTDSAGGAIDAVEQNGIVFIDEIDKICKKGEYS--GADVSREGVQRDLLPLVEGSTVSTKHGMVKTDHILFIA 172 (309)
T ss_dssp TTHHHHHHHHTTTTCHHHHHHHCEEEEECGGGGSCCSSCC--SSHHHHHHHHHHHHHHHHCCEEEETTEEEECTTCEEEE
T ss_pred ccccccccchhhhcccccccCCceEEehhhhhhhhhccCc--ccchhhhHHHHHhhHHhcCCEEecCCeEEEccceeEEe
Confidence 89999999999864 358999999999998765432 1222344578899999997532 33567777
Q ss_pred E----eCCCCccchhhcCCCcccceeeecCCCHHHHHHHHHHhh
Q 005003 401 A----TNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHG 440 (720)
Q Consensus 401 a----TN~p~~LD~ALlrpgRFdr~I~i~~Pd~~eR~~IL~~~l 440 (720)
+ +|.++.++|+++. ||++.+.++.|+..++.+|++.+.
T Consensus 173 ~ga~~~~~~~~~~p~l~~--R~~~~i~~~~~~~~~~~~Il~~~~ 214 (309)
T d1ofha_ 173 SGAFQVARPSDLIPELQG--RLPIRVELTALSAADFERILTEPH 214 (309)
T ss_dssp EECCSSSCGGGSCHHHHH--TCCEEEECCCCCHHHHHHHHHSST
T ss_pred ccchhhcCcccchhhhhh--hhheeeeccCCCHHHHHHHHHHHH
Confidence 6 5678888888886 999999999999999999987653
No 11
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=99.88 E-value=5.6e-22 Score=199.76 Aligned_cols=218 Identities=23% Similarity=0.275 Sum_probs=163.0
Q ss_pred CCCCccccccchHHHHHHHHHHHHhcCchhhhhccCcCCceEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHHHHh
Q 005003 252 TGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFV 331 (720)
Q Consensus 252 ~~~~f~dI~G~de~k~eL~eiv~~l~~p~~~~~~g~~~prgVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~~~~ 331 (720)
+|.+|+|++|+++++++|+.+++..+.. ...+.++|||||||||||++|+++|+++++++..++++.....
T Consensus 4 RP~~~ddivGq~~~~~~L~~~i~~~~~~-------~~~~~~~Ll~GPpG~GKTtla~~la~~~~~~~~~~~~~~~~~~-- 74 (239)
T d1ixsb2 4 RPKTLDEYIGQERLKQKLRVYLEAAKAR-------KEPLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEKP-- 74 (239)
T ss_dssp CCCSGGGSCSCHHHHHHHHHHHHHHTTS-------SSCCCCEEEECCTTSCHHHHHHHHHHHHTCCEEEEETTTCCSH--
T ss_pred CCCCHHHhCCHHHHHHHHHHHHHHHHhc-------CCCCCeEEEECCCCCCHHHHHHHHHHHhCCCeEeccCCccccc--
Confidence 3568999999999999999999876543 2346689999999999999999999999999999998765321
Q ss_pred hhchHHHHHHHHHHHhcCCeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhh--hcC-----------ccCCCcEEE
Q 005003 332 GVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTE--MDG-----------FEGNTGIIV 398 (720)
Q Consensus 332 G~~~~~vr~lF~~A~~~~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~--ldg-----------~~~~~~ViV 398 (720)
.......... ....+|+||||+|.+.+. .+..+...++. ++. ...+.++++
T Consensus 75 ----~~~~~~~~~~-~~~~~i~~iDe~~~~~~~-----------~~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (239)
T d1ixsb2 75 ----GDLAAILANS-LEEGDILFIDEIHRLSRQ-----------AEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTL 138 (239)
T ss_dssp ----HHHHHHHHTT-CCTTCEEEEETGGGCCHH-----------HHHHHHHHHHHSEEEEECSCTTCCCEEEEECCCCEE
T ss_pred ----hhhHHHHHhh-ccCCCeeeeecccccchh-----------HHHhhhhhhhhhhhhhhhccchhhhhcccCCCCEEE
Confidence 1111111111 223579999999998422 22222222221 110 122456889
Q ss_pred EEEeCCCCccchhhcCCCcccceeeecCCCHHHHHHHHHHhhcCCCCccc-ccHHHHHHhCCCCcHHHHHHHHHHHHHHH
Q 005003 399 IAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDAD-VSLDVIAMRTPGFSGADLANLLNEAAILA 477 (720)
Q Consensus 399 IaaTN~p~~LD~ALlrpgRFdr~I~i~~Pd~~eR~~IL~~~l~~~~l~~d-vdl~~LA~~t~G~SgadL~~lv~eAa~~A 477 (720)
|++||++...+++.++ |+...+.+..|+.+++..++...+.......+ ..++.++..+.| +.+...++++.+...|
T Consensus 139 i~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~l~~ia~~s~g-d~R~a~~~l~~~~~~a 215 (239)
T d1ixsb2 139 IGATTRPGLITAPLLS--RFGIVEHLEYYTPEELAQGVMRDARLLGVRITEEAALEIGRRSRG-TMRVAKRLFRRVRDFA 215 (239)
T ss_dssp EEEESCCSSCSCGGGG--GCSEEEECCCCCHHHHHHHHHHHHGGGCCCBCHHHHHHHHHHTTS-SHHHHHHHHHHHHHHH
T ss_pred EeeccCcccccchhhc--ccceeeEeeccChhhhhHHHHHHHHHhCCccchHHHHHHHHHcCC-CHHHHHHHHHHHHHHH
Confidence 9999999988888888 77778999999999999999987776554433 247788888887 6788889999998888
Q ss_pred HHhCCCccCHHHHHHHHHHH
Q 005003 478 GRRGKAAISSKEIDDSIDRI 497 (720)
Q Consensus 478 ~r~~~~~It~~dl~~Al~~v 497 (720)
...+...||.+++.+++..+
T Consensus 216 ~~~~~~~It~~~~~~~l~~l 235 (239)
T d1ixsb2 216 QVAGEEVITRERALEALAAL 235 (239)
T ss_dssp TTSCCSCBCHHHHHHHHHHH
T ss_pred HHhCCCCcCHHHHHHHHhhh
Confidence 88888999999999998754
No 12
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.78 E-value=8.4e-19 Score=175.36 Aligned_cols=203 Identities=21% Similarity=0.241 Sum_probs=147.0
Q ss_pred ccccCCCCCccccccchHHHHHHHHHHHHhcCchhhhhccCcCCceEEEEccCCChHHHHHHHHHHhcC-----CCEEEE
Q 005003 247 QMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAG-----VPFFSI 321 (720)
Q Consensus 247 ~~~~~~~~~f~dI~G~de~k~eL~eiv~~l~~p~~~~~~g~~~prgVLL~GPPGTGKT~LArAlA~e~g-----~pf~~v 321 (720)
|.+++.|.+|+|++|++++++.+++++..-+. .++||+||||+|||++|+++|++++ .+++++
T Consensus 14 w~~ky~P~~~~diig~~~~~~~l~~~i~~~~~------------~~lll~Gp~G~GKTtla~~iak~l~~~~~~~~~~e~ 81 (231)
T d1iqpa2 14 WVEKYRPQRLDDIVGQEHIVKRLKHYVKTGSM------------PHLLFAGPPGVGKTTAALALARELFGENWRHNFLEL 81 (231)
T ss_dssp HHHHTCCCSTTTCCSCHHHHHHHHHHHHHTCC------------CEEEEESCTTSSHHHHHHHHHHHHHGGGHHHHEEEE
T ss_pred HHHHhCCCCHHHccCcHHHHHHHHHHHHcCCC------------CeEEEECCCCCcHHHHHHHHHHHHHhcccCCCeeEE
Confidence 56778888999999999999999988864322 2699999999999999999999864 478888
Q ss_pred echhhHHHHhhhchHHHHHHHHHH------HhcCCeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhhhcCccCCCc
Q 005003 322 SGSEFVEMFVGVGASRVRDLFKKA------KENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTG 395 (720)
Q Consensus 322 s~s~~~~~~~G~~~~~vr~lF~~A------~~~~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~ldg~~~~~~ 395 (720)
++++.... ..++..+... ....+.|+++||+|.+.. . ..+.|+..++. ....
T Consensus 82 n~s~~~~~------~~~~~~~~~~~~~~~~~~~~~~iilide~d~~~~-----------~---~~~~ll~~l~~--~~~~ 139 (231)
T d1iqpa2 82 NASDERGI------NVIREKVKEFARTKPIGGASFKIIFLDEADALTQ-----------D---AQQALRRTMEM--FSSN 139 (231)
T ss_dssp ETTCHHHH------HTTHHHHHHHHHSCCGGGCSCEEEEEETGGGSCH-----------H---HHHHHHHHHHH--TTTT
T ss_pred ecCcccch------hHHHHHHHHHHhhhhccCCCceEEeehhhhhcch-----------h---HHHHHhhhccc--CCcc
Confidence 88765432 1122222222 234578999999999832 2 23344554442 2456
Q ss_pred EEEEEEeCCCCccchhhcCCCcccceeeecCCCHHHHHHHHHHhhcCCCCc-ccccHHHHHHhCCCCcHHHHHHHHHHHH
Q 005003 396 IIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFD-ADVSLDVIAMRTPGFSGADLANLLNEAA 474 (720)
Q Consensus 396 ViVIaaTN~p~~LD~ALlrpgRFdr~I~i~~Pd~~eR~~IL~~~l~~~~l~-~dvdl~~LA~~t~G~SgadL~~lv~eAa 474 (720)
+++|++||.+..+++++.+ |+. .+.++.|+..+...+++..+.+..+. .+..++.+++.+.| +.+++.++++.+.
T Consensus 140 ~~~i~~~n~~~~i~~~l~s--R~~-~i~~~~~~~~~~~~~l~~~~~~e~i~i~~~~l~~I~~~~~g-diR~ai~~Lq~~~ 215 (231)
T d1iqpa2 140 VRFILSCNYSSKIIEPIQS--RCA-IFRFRPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEG-DMRRAINILQAAA 215 (231)
T ss_dssp EEEEEEESCGGGSCHHHHH--TEE-EEECCCCCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHHTT-CHHHHHHHHHHHH
T ss_pred eEEEeccCChhhchHhHhC--ccc-cccccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHHcCC-CHHHHHHHHHHHH
Confidence 8999999999999999998 885 79999999999999999988776654 23347888887765 5555555554432
Q ss_pred HHHHHhCCCccCHHHHHH
Q 005003 475 ILAGRRGKAAISSKEIDD 492 (720)
Q Consensus 475 ~~A~r~~~~~It~~dl~~ 492 (720)
.....|+.+++..
T Consensus 216 -----~~~~~it~e~v~~ 228 (231)
T d1iqpa2 216 -----ALDKKITDENVFM 228 (231)
T ss_dssp -----TTCSEECHHHHHH
T ss_pred -----HcCCCcCHHHHHh
Confidence 3456788887754
No 13
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.78 E-value=5.1e-19 Score=178.53 Aligned_cols=227 Identities=18% Similarity=0.251 Sum_probs=148.7
Q ss_pred ccccccCCCCCccccccchHHHHHHHHHHHHhcCchh-----hhhccCcCCceEEEEccCCChHHHHHHHHHHhcCCCEE
Q 005003 245 KFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPER-----FTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFF 319 (720)
Q Consensus 245 ~~~~~~~~~~~f~dI~G~de~k~eL~eiv~~l~~p~~-----~~~~g~~~prgVLL~GPPGTGKT~LArAlA~e~g~pf~ 319 (720)
++|.+++.|.+|+|++|.++.+++|.+.+..+..... +...+...++++|||||||||||++|+++|++++.+++
T Consensus 2 ~lW~eky~P~~~~dlig~~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~lll~GPpG~GKTt~a~~la~~~~~~~~ 81 (253)
T d1sxja2 2 KLWTVKYAPTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYDIL 81 (253)
T ss_dssp CCHHHHTCCSSGGGCCSCHHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHHHHHHHHTTCEEE
T ss_pred CccccCcCCCCHHHhcCCHHHHHHHHHHHHhhhhcchhhhhhhcccCCCCCceEEEECCCCCCHHHHHHHHHHHHHhhhh
Confidence 5788889999999999999999999998765332111 12334556678999999999999999999999999999
Q ss_pred EEechhhHHHHhhhc-hHH------HHHHH---HH--HHhcCCeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhhh
Q 005003 320 SISGSEFVEMFVGVG-ASR------VRDLF---KK--AKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEM 387 (720)
Q Consensus 320 ~vs~s~~~~~~~G~~-~~~------vr~lF---~~--A~~~~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~l 387 (720)
.+++++..+...... ... ....+ .. .....+.++++||+|.+.... +..+..++...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ide~~~~~~~~-----------~~~~~~~~~~~ 150 (253)
T d1sxja2 82 EQNASDVRSKTLLNAGVKNALDNMSVVGYFKHNEEAQNLNGKHFVIIMDEVDGMSGGD-----------RGGVGQLAQFC 150 (253)
T ss_dssp EECTTSCCCHHHHHHTGGGGTTBCCSTTTTTC----CCSSTTSEEEEECSGGGCCTTS-----------TTHHHHHHHHH
T ss_pred ccccccchhhHHHHHHHHHHhhcchhhhhhhhhhhcccccccceEEEeeeccccccch-----------hhhhHHHhhhh
Confidence 999876543221100 000 00000 00 012346799999999984321 12233344333
Q ss_pred cCccCCCcEEEEEEeCCCCccchhhcCCCcccceeeecCCCHHHHHHHHHHhhcC--CCCcccccHHHHHHhCCCCcHHH
Q 005003 388 DGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSN--KKFDADVSLDVIAMRTPGFSGAD 465 (720)
Q Consensus 388 dg~~~~~~ViVIaaTN~p~~LD~ALlrpgRFdr~I~i~~Pd~~eR~~IL~~~l~~--~~l~~dvdl~~LA~~t~G~Sgad 465 (720)
.. ....++++++++....+++ + + |+.+.++|+.|+.+++..+++..+.. ..+++ ..++.+++.+.| |
T Consensus 151 ~~--~~~~ii~i~~~~~~~~~~~-l-~--~~~~~i~f~~~~~~~i~~~l~~i~~~e~i~i~~-~~l~~i~~~s~G----D 219 (253)
T d1sxja2 151 RK--TSTPLILICNERNLPKMRP-F-D--RVCLDIQFRRPDANSIKSRLMTIAIREKFKLDP-NVIDRLIQTTRG----D 219 (253)
T ss_dssp HH--CSSCEEEEESCTTSSTTGG-G-T--TTSEEEECCCCCHHHHHHHHHHHHHHHTCCCCT-THHHHHHHHTTT----C
T ss_pred cc--ccccccccccccccccccc-c-c--ceeeeeeccccchhHHHHHHHHHHHHhCCCCCH-HHHHHHHHhCCC----c
Confidence 22 2334666666666666664 4 3 45679999999999999999987753 33433 347889988765 7
Q ss_pred HHHHHHHHHHHHHHhCCCccCHHHHHHHHH
Q 005003 466 LANLLNEAAILAGRRGKAAISSKEIDDSID 495 (720)
Q Consensus 466 L~~lv~eAa~~A~r~~~~~It~~dl~~Al~ 495 (720)
++.+++.....+ .+...++.+++.+...
T Consensus 220 iR~ai~~L~~~~--~~~~~i~~~~~~~~~~ 247 (253)
T d1sxja2 220 IRQVINLLSTIS--TTTKTINHENINEISK 247 (253)
T ss_dssp HHHHHHHHTHHH--HHSSCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHH--HcCCCCCHHHHHHHhc
Confidence 777766543333 2345677777765543
No 14
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.78 E-value=2.9e-19 Score=178.06 Aligned_cols=210 Identities=21% Similarity=0.216 Sum_probs=147.8
Q ss_pred ccccCCCCCccccccchHHHHHHHHHHHHhcCchhhhhccCcCCceEEEEccCCChHHHHHHHHHHhcCC-----CEEEE
Q 005003 247 QMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGV-----PFFSI 321 (720)
Q Consensus 247 ~~~~~~~~~f~dI~G~de~k~eL~eiv~~l~~p~~~~~~g~~~prgVLL~GPPGTGKT~LArAlA~e~g~-----pf~~v 321 (720)
|.+++.+.+|+|++|++++++.|++.+..-+ .| ++|||||||||||++|+++|++++. .++..
T Consensus 4 w~ekyrP~~~~divg~~~~~~~L~~~i~~~~-----------~~-~lLl~Gp~G~GKttl~~~la~~l~~~~~~~~~~e~ 71 (227)
T d1sxjc2 4 WVEKYRPETLDEVYGQNEVITTVRKFVDEGK-----------LP-HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLEL 71 (227)
T ss_dssp HHHHTCCSSGGGCCSCHHHHHHHHHHHHTTC-----------CC-CEEEECSSSSSHHHHHHHHHHHHHTTSHHHHEEEE
T ss_pred hhhhhCCCCHHHccCcHHHHHHHHHHHHcCC-----------CC-eEEEECCCCCChhHHHHHHHHHhhcCCCcceeEEe
Confidence 4567788999999999999999988875321 23 5999999999999999999998753 35566
Q ss_pred echhhHHHHhhhchHHHHHHHHHH------HhcCCeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhhhcCccCCCc
Q 005003 322 SGSEFVEMFVGVGASRVRDLFKKA------KENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTG 395 (720)
Q Consensus 322 s~s~~~~~~~G~~~~~vr~lF~~A------~~~~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~ldg~~~~~~ 395 (720)
++++..... .....+... ......+++|||+|.+. . ...+.|+..++.. ...
T Consensus 72 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~kiiiiDe~d~~~-----------~---~~~~~Ll~~le~~--~~~ 129 (227)
T d1sxjc2 72 NASDDRGID------VVRNQIKDFASTRQIFSKGFKLIILDEADAMT-----------N---AAQNALRRVIERY--TKN 129 (227)
T ss_dssp CTTSCCSHH------HHHTHHHHHHHBCCSSSCSCEEEEETTGGGSC-----------H---HHHHHHHHHHHHT--TTT
T ss_pred cccccCCee------eeecchhhccccccccCCCeEEEEEeccccch-----------h---hHHHHHHHHhhhc--ccc
Confidence 655433211 111111111 12334699999999982 1 2345566666533 346
Q ss_pred EEEEEEeCCCCccchhhcCCCcccceeeecCCCHHHHHHHHHHhhcCCCCc-ccccHHHHHHhCCCCcHHHHHHHHHHHH
Q 005003 396 IIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFD-ADVSLDVIAMRTPGFSGADLANLLNEAA 474 (720)
Q Consensus 396 ViVIaaTN~p~~LD~ALlrpgRFdr~I~i~~Pd~~eR~~IL~~~l~~~~l~-~dvdl~~LA~~t~G~SgadL~~lv~eAa 474 (720)
++++.+||.+..+++++++ |+. .+.+..|+.++...++...+....+. ++..++.+++.+.| +.+.+-+.++.+.
T Consensus 130 ~~~~~~~~~~~~i~~~i~s--r~~-~i~~~~~~~~~i~~~l~~I~~~e~i~i~~~~l~~i~~~s~G-d~R~ain~Lq~~~ 205 (227)
T d1sxjc2 130 TRFCVLANYAHKLTPALLS--QCT-RFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNG-DMRRVLNVLQSCK 205 (227)
T ss_dssp EEEEEEESCGGGSCHHHHT--TSE-EEECCCCCHHHHHHHHHHHHHTTTCCBCHHHHHHHHHHHTT-CHHHHHHHTTTTT
T ss_pred eeeccccCcHHHhHHHHHH--HHh-hhccccccccccccccccccccccccCCHHHHHHHHHHcCC-cHHHHHHHHHHHH
Confidence 8899999999999999998 774 78999999999999998877665443 23347888888776 5555555555555
Q ss_pred HHHHHhCCCccCHHHHHHHH
Q 005003 475 ILAGRRGKAAISSKEIDDSI 494 (720)
Q Consensus 475 ~~A~r~~~~~It~~dl~~Al 494 (720)
..+...+...|+.+++.+++
T Consensus 206 ~~~~~~~~~~It~~~v~e~~ 225 (227)
T d1sxjc2 206 ATLDNPDEDEISDDVIYECC 225 (227)
T ss_dssp TTTCSSSCCCBCHHHHHHHT
T ss_pred HhcCCCCCCeeCHHHHHHHh
Confidence 44544566789999988775
No 15
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.75 E-value=1.6e-17 Score=167.82 Aligned_cols=205 Identities=20% Similarity=0.293 Sum_probs=147.3
Q ss_pred ccCCCCCccccccchHHHHHHHHHHHHhcCchhhhhccCcCCceEEEEccCCChHHHHHHHHHHhcCCC-----------
Q 005003 249 EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVP----------- 317 (720)
Q Consensus 249 ~~~~~~~f~dI~G~de~k~eL~eiv~~l~~p~~~~~~g~~~prgVLL~GPPGTGKT~LArAlA~e~g~p----------- 317 (720)
++++|.+|+|++|++++++.|...+.. .+.|.++|||||||||||++|++++++++.+
T Consensus 4 ~KyrP~~~~dlig~~~~~~~L~~~i~~-----------~~~~~~~Ll~Gp~G~GKtt~a~~~~~~l~~~~~~~~~~~~~~ 72 (239)
T d1njfa_ 4 RKWRPQTFADVVGQEHVLTALANGLSL-----------GRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVC 72 (239)
T ss_dssp HHTCCSSGGGSCSCHHHHHHHHHHHHT-----------TCCCSEEEEECSTTSSHHHHHHHHHHHHHCTTCSCSSCCSCS
T ss_pred hhhCCCCHHHccChHHHHHHHHHHHHc-----------CCCCeeEEEECCCCCcHHHHHHHHHHHhcCccccccCccccc
Confidence 356678999999999999998887752 2356689999999999999999999987432
Q ss_pred -------------EEEEechhhHHHHhhhchHHHHHHHHHHHh----cCCeEEEEccchhcccccCCCCCCCChHHHHHH
Q 005003 318 -------------FFSISGSEFVEMFVGVGASRVRDLFKKAKE----NAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTL 380 (720)
Q Consensus 318 -------------f~~vs~s~~~~~~~G~~~~~vr~lF~~A~~----~~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~l 380 (720)
++.++.++. .+...++++++.+.. ....|++|||+|.+. .+..
T Consensus 73 ~~~~~i~~~~~~~~~~~~~~~~------~~i~~ir~~~~~~~~~~~~~~~kviiIde~d~l~--------------~~~q 132 (239)
T d1njfa_ 73 DNCREIEQGRFVDLIEIDAASR------TKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLS--------------RHSF 132 (239)
T ss_dssp HHHHHHHHTCCTTEEEEETTCS------SSHHHHHHHHHSCCCSCSSSSSEEEEEETGGGSC--------------HHHH
T ss_pred hHHHHHHcCCCCeEEEecchhc------CCHHHHHHHHHHHHhccccCCCEEEEEECcccCC--------------HHHH
Confidence 233333211 122345666665532 234699999999982 2345
Q ss_pred HHHHhhhcCccCCCcEEEEEEeCCCCccchhhcCCCcccceeeecCCCHHHHHHHHHHhhcCCCCc-ccccHHHHHHhCC
Q 005003 381 NQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFD-ADVSLDVIAMRTP 459 (720)
Q Consensus 381 n~LL~~ldg~~~~~~ViVIaaTN~p~~LD~ALlrpgRFdr~I~i~~Pd~~eR~~IL~~~l~~~~l~-~dvdl~~LA~~t~ 459 (720)
+.|+..|+. +..++.+|++||.++.+.+++++ |+ +.+.++.|+.++..+++...+...... ++..++.+++.+.
T Consensus 133 ~~Llk~lE~--~~~~~~~il~tn~~~~i~~~i~S--Rc-~~i~~~~~~~~~i~~~l~~i~~~e~~~~~~~~l~~i~~~s~ 207 (239)
T d1njfa_ 133 NALLKTLEE--PPEHVKFLLATTDPQKLPVTILS--RC-LQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAE 207 (239)
T ss_dssp HHHHHHHHS--CCTTEEEEEEESCGGGSCHHHHT--TS-EEEECCCCCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHTT
T ss_pred HHHHHHHhc--CCCCeEEEEEcCCccccChhHhh--hh-cccccccCcHHHhhhHHHHHHhhhccCCCHHHHHHHHHHcC
Confidence 667777774 34568899999999999999999 77 488999999999888877665433222 2234778888887
Q ss_pred CCcHHHHHHHHHHHHHHHHHhCCCccCHHHHHHHH
Q 005003 460 GFSGADLANLLNEAAILAGRRGKAAISSKEIDDSI 494 (720)
Q Consensus 460 G~SgadL~~lv~eAa~~A~r~~~~~It~~dl~~Al 494 (720)
| +.+.+.++++.| ...+...|+.+++.+++
T Consensus 208 G-d~R~ain~l~~~----~~~~~~~I~~~~v~~~l 237 (239)
T d1njfa_ 208 G-SLRDALSLTDQA----IASGDGQVSTQAVSAML 237 (239)
T ss_dssp T-CHHHHHHHHHHH----HHHTTTSBCHHHHHHHH
T ss_pred C-CHHHHHHHHHHH----HHhCCCCcCHHHHHHHh
Confidence 6 566666665543 34567789999998775
No 16
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=99.73 E-value=6.6e-21 Score=204.97 Aligned_cols=197 Identities=15% Similarity=0.094 Sum_probs=140.3
Q ss_pred cCcCCceEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHHHH-hhhchHHHHHHHHHH------HhcCCeEEEEccc
Q 005003 286 GARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMF-VGVGASRVRDLFKKA------KENAPCIVFVDEI 358 (720)
Q Consensus 286 g~~~prgVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~~~-~G~~~~~vr~lF~~A------~~~~P~ILfIDEI 358 (720)
|.+.++++|||||||||||++|+++|+.++.+|+++++++..+.+ ++........+|+.+ ....|+++|+||+
T Consensus 150 ~~~~~~~~~~~g~~~~gk~~~~~~~~~~~~~~~i~in~s~~rs~~~l~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~Dei 229 (362)
T d1svma_ 150 NIPKKRYWLFKGPIDSGKTTLAAALLELCGGKALNVNLPLDRLNFELGVAIDQFLVVFEDVKGTGGESRDLPSGQGINNL 229 (362)
T ss_dssp CCTTCCEEEEECSTTSSHHHHHHHHHHHHCCEEECCSSCTTTHHHHHGGGTTCSCEEETTCCCSTTTTTTCCCCSHHHHH
T ss_pred CCCCcCeEEEECCCCCCHHHHHHHHHHHcCCCEEEEECcchhhHHHHHhHHHHHHHHHHHHHHhhhhccCCCCeEEEehH
Confidence 555667999999999999999999999999999999999877665 444443333344443 2344667777777
Q ss_pred hhcccccCCCCCCCChHHHHHHHHHHhhhcCccCC----CcEEEEEEeCCCCccchhhcCCCcccceeeecCCCHHHHH-
Q 005003 359 DAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGN----TGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRT- 433 (720)
Q Consensus 359 D~l~~~r~~~~~~~~~e~~~~ln~LL~~ldg~~~~----~~ViVIaaTN~p~~LD~ALlrpgRFdr~I~i~~Pd~~eR~- 433 (720)
|.+...++.+.... ++....+ ....+|+|||. ++.++++|+||++.+.+..|+...|.
T Consensus 230 D~l~~~~dg~~~~~--------------~~~~~~~~~~~~~~p~i~ttN~---~~~~~~r~~Rf~~~i~~~~~~~~~~~~ 292 (362)
T d1svma_ 230 DNLRDYLDGSVKVN--------------LEKKHLNKRTQIFPPGIVTMNE---YSVPKTLQARFVKQIDFRPKDYLKHCL 292 (362)
T ss_dssp HTTHHHHHCSSCEE--------------ECCSSSCCEEECCCCEEEEECS---CCCCHHHHTTEEEEEECCCCHHHHHHH
T ss_pred hhcccccCCcchhh--------------hhhhhhchhhhccCCceeeccc---ccccccccccCceEEeecCCCcHHHHH
Confidence 76643322110000 0100000 01137889995 46677889999999999999877764
Q ss_pred HHHHHhhcCCCCcccccHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhCCCccCHHHHHHHHHHHHcCc
Q 005003 434 EILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGM 501 (720)
Q Consensus 434 ~IL~~~l~~~~l~~dvdl~~LA~~t~G~SgadL~~lv~eAa~~A~r~~~~~It~~dl~~Al~~v~~~~ 501 (720)
.++..++++..+. .+.+.++..+.+++++|+.++++++...+.++....++...+.+...++..|.
T Consensus 293 ~~l~~i~~~~~l~--~~~~~L~~li~~~s~~D~~~~i~~~~~~~~~~l~~ei~~~~~~~~k~~I~~Gk 358 (362)
T d1svma_ 293 ERSEFLLEKRIIQ--SGIALLLMLIWYRPVAEFAQSIQSRIVEWKERLDKEFSLSVYQKMKFNVAMGI 358 (362)
T ss_dssp HTCTHHHHTTCTT--CHHHHHHHHHHHSCGGGSCGGGHHHHHHHHHHHHHHCCHHHHHHHHHHHHHTS
T ss_pred HHHHHHhcccCCC--CCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhhhccHHHHHHHHHHHHcCC
Confidence 4556666655554 34677888888999999999999999988888778899999999988887763
No 17
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=99.72 E-value=9.8e-17 Score=161.25 Aligned_cols=228 Identities=17% Similarity=0.179 Sum_probs=154.8
Q ss_pred CCCCccccccchHHHHHHHHHHHH-hcCchhhhhccCcCCceEEEEccCCChHHHHHHHHHHhc----CCCEEEEechhh
Q 005003 252 TGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEA----GVPFFSISGSEF 326 (720)
Q Consensus 252 ~~~~f~dI~G~de~k~eL~eiv~~-l~~p~~~~~~g~~~prgVLL~GPPGTGKT~LArAlA~e~----g~pf~~vs~s~~ 326 (720)
+....+.++|.++.++.+.+++.. ++++. ..|.++||+||||||||++|+++++.+ +..++.+++...
T Consensus 11 ~~y~p~~l~~Re~ei~~l~~~l~~~l~~~~-------~~~~~lll~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~ 83 (276)
T d1fnna2 11 PSYVPKRLPHREQQLQQLDILLGNWLRNPG-------HHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIY 83 (276)
T ss_dssp TTCCCSCCTTCHHHHHHHHHHHHHHHHSTT-------SSCCEEEEECCTTSSHHHHHHHHHHHHTTSCCCEEEEEETTTC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHhCCC-------CCCCceEEECCCCCCHHHHHHHHHHHHhcccCCcEEEecchhh
Confidence 344567889999999988888765 34442 457799999999999999999999886 456777776543
Q ss_pred HHH------H----------hhhchHH-HHHHHHHH-HhcCCeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhhhc
Q 005003 327 VEM------F----------VGVGASR-VRDLFKKA-KENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMD 388 (720)
Q Consensus 327 ~~~------~----------~G~~~~~-vr~lF~~A-~~~~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~ld 388 (720)
... . .+..... ...+.+.. ....+.++++|++|.+. ......+..++..+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-----------~~~~~~~~~~~~~~~ 152 (276)
T d1fnna2 84 RNFTAIIGEIARSLNIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLA-----------PDILSTFIRLGQEAD 152 (276)
T ss_dssp CSHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHTTCCEEEEEETGGGSC-----------HHHHHHHHHHTTCHH
T ss_pred hhhhhhhhhhHHhhhhhhhhhccchhHHHHHHHHHHhhcccccccchhHHHHhh-----------hhhhhhHHHHHhccc
Confidence 211 0 0111112 22233333 23456788899999873 222333344444332
Q ss_pred CccCCCcEEEEEEeCCC---CccchhhcCCCccc-ceeeecCCCHHHHHHHHHHhhcCCCCc---ccccHHHHHHhC---
Q 005003 389 GFEGNTGIIVIAATNRA---DILDSALLRPGRFD-RQVTVDVPDIRGRTEILKVHGSNKKFD---ADVSLDVIAMRT--- 458 (720)
Q Consensus 389 g~~~~~~ViVIaaTN~p---~~LD~ALlrpgRFd-r~I~i~~Pd~~eR~~IL~~~l~~~~l~---~dvdl~~LA~~t--- 458 (720)
. .....+++|+++|.. +.+++.+.+ |+. ..|.++.|+.+++.+|++.++...... .+..++.++..+
T Consensus 153 ~-~~~~~~~~i~~~~~~~~~~~~~~~~~~--r~~~~~i~~~~~~~~e~~~il~~r~~~~~~~~~~~~~~l~~ia~~~~~~ 229 (276)
T d1fnna2 153 K-LGAFRIALVIVGHNDAVLNNLDPSTRG--IMGKYVIRFSPYTKDQIFDILLDRAKAGLAEGSYSEDILQMIADITGAQ 229 (276)
T ss_dssp H-HSSCCEEEEEEESSTHHHHTSCHHHHH--HHTTCEEECCCCBHHHHHHHHHHHHHHHBCTTSSCHHHHHHHHHHHSBS
T ss_pred c-ccccceEEeecCCchhhhhhcchhhhh--hhcchhccccchhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHhhhh
Confidence 2 234567888888874 467788877 543 468999999999999998876532211 222355566543
Q ss_pred -----CCCcHHHHHHHHHHHHHHHHHhCCCccCHHHHHHHHHHHHcC
Q 005003 459 -----PGFSGADLANLLNEAAILAGRRGKAAISSKEIDDSIDRIVAG 500 (720)
Q Consensus 459 -----~G~SgadL~~lv~eAa~~A~r~~~~~It~~dl~~Al~~v~~~ 500 (720)
.+-+++.+.++|+.|...|..+++..|+.+|+++|.+++..|
T Consensus 230 ~~~~~~~G~~R~a~~ll~~a~~~A~~~~~~~I~~edv~~A~~~~~~g 276 (276)
T d1fnna2 230 TPLDTNRGDARLAIDILYRSAYAAQQNGRKHIAPEDVRKSSKEVLFG 276 (276)
T ss_dssp STTCTTSCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHSCC
T ss_pred hhhhhcCCCHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHhCC
Confidence 223678889999999999999999999999999999988654
No 18
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=99.71 E-value=1.6e-16 Score=160.57 Aligned_cols=232 Identities=16% Similarity=0.080 Sum_probs=154.3
Q ss_pred CCccccccchHHHHHHHHHHH-HhcCchhhhhccCcCCceEEEEccCCChHHHHHHHHHHhcC---------CCEEEEec
Q 005003 254 VTFDDVAGVDEAKQDFMEVVE-FLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAG---------VPFFSISG 323 (720)
Q Consensus 254 ~~f~dI~G~de~k~eL~eiv~-~l~~p~~~~~~g~~~prgVLL~GPPGTGKT~LArAlA~e~g---------~pf~~vs~ 323 (720)
...+.+.|.++..+++.+++. .+.+... ....+..++|+||||||||++++++++++. ..+.++++
T Consensus 13 ~~P~~~~~Re~e~~~l~~~l~~~~~~~~~----~~~~~~~l~l~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~ 88 (287)
T d1w5sa2 13 YIPPELRVRRGEAEALARIYLNRLLSGAG----LSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVNA 88 (287)
T ss_dssp CCCSSCSSSCHHHHHHHHHHHHHHHTSSC----BCCEEEEEECTTCCSSSHHHHHHHHHHHHHHHHHHTTCCEEEEEEEG
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHcCCC----CCCcceEEEeECCCCCCHHHHHHHHHHHHHhhcccccCCceeeeecc
Confidence 456788999998888887653 3333211 112223467889999999999999998752 34555555
Q ss_pred hhhHHH----------------HhhhchHHHHHHHHH-HH-hcCCeEEEEccchhcccccCCCCCCCChHHHHHHHHHHh
Q 005003 324 SEFVEM----------------FVGVGASRVRDLFKK-AK-ENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLT 385 (720)
Q Consensus 324 s~~~~~----------------~~G~~~~~vr~lF~~-A~-~~~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~ 385 (720)
...... ..+.....+.+.+.. .+ ...+.++++||+|.+..... ...+....+..+.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iide~d~l~~~~~-----~~~~~~~~l~~l~~ 163 (287)
T d1w5sa2 89 FNAPNLYTILSLIVRQTGYPIQVRGAPALDILKALVDNLYVENHYLLVILDEFQSMLSSPR-----IAAEDLYTLLRVHE 163 (287)
T ss_dssp GGCCSHHHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHHHHHHTCEEEEEEESTHHHHSCTT-----SCHHHHHHHHTHHH
T ss_pred ccccchhhHHHHHhhhcccccccccchHHHHHHHHHHHHHhccCccccceeEEEEeccccc-----cchhHHHHHHHHHH
Confidence 443211 012222233333333 22 34567889999999965432 23344445555555
Q ss_pred hhcCccCCCcEEEEEEeCCCCcc------chhhcCCCcccceeeecCCCHHHHHHHHHHhhcCCCCcc---cccHHHHHH
Q 005003 386 EMDGFEGNTGIIVIAATNRADIL------DSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDA---DVSLDVIAM 456 (720)
Q Consensus 386 ~ldg~~~~~~ViVIaaTN~p~~L------D~ALlrpgRFdr~I~i~~Pd~~eR~~IL~~~l~~~~l~~---dvdl~~LA~ 456 (720)
.+........+.+|+.+|.++.. ++.+.+ ||...++++.|+.++..+|++..+....... +..++.+++
T Consensus 164 ~l~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~--r~~~~i~f~~y~~~el~~Il~~r~~~~~~~~~~~~~al~~ia~ 241 (287)
T d1w5sa2 164 EIPSRDGVNRIGFLLVASDVRALSYMREKIPQVES--QIGFKLHLPAYKSRELYTILEQRAELGLRDTVWEPRHLELISD 241 (287)
T ss_dssp HSCCTTSCCBEEEEEEEEETHHHHHHHHHCHHHHT--TCSEEEECCCCCHHHHHHHHHHHHHHHBCTTSCCHHHHHHHHH
T ss_pred hcchhhcccceeEEeecccHHHHHHHHhhccchhc--ccceeeeccCCcHHHHHHHHhhhHHHhhccCCCCHHHHHHHHH
Confidence 55555566677788777765533 356777 8899999999999999999998764322221 222677776
Q ss_pred hCC-----CCcHHHHHHHHHHHHHHHHHhCCCccCHHHHHHHHHH
Q 005003 457 RTP-----GFSGADLANLLNEAAILAGRRGKAAISSKEIDDSIDR 496 (720)
Q Consensus 457 ~t~-----G~SgadL~~lv~eAa~~A~r~~~~~It~~dl~~Al~~ 496 (720)
.+. ....+...++|++|+..|..+++..||.+|+++|+..
T Consensus 242 ~~~~~~~~~gd~R~ai~~l~~a~~~A~~~~~~~It~~~V~~A~~e 286 (287)
T d1w5sa2 242 VYGEDKGGDGSARRAIVALKMACEMAEAMGRDSLSEDLVRKAVSE 286 (287)
T ss_dssp HHCGGGTSCCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHH
T ss_pred HHhccccCCCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHhc
Confidence 553 2367788899999999999999999999999999864
No 19
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.70 E-value=9.5e-17 Score=159.87 Aligned_cols=213 Identities=19% Similarity=0.228 Sum_probs=146.4
Q ss_pred cccCCCCCccccccchHHHHHHHHHHHHhcCchhhhhccCcCCceEEEEccCCChHHHHHHHHHHhc------CCCEEEE
Q 005003 248 MEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEA------GVPFFSI 321 (720)
Q Consensus 248 ~~~~~~~~f~dI~G~de~k~eL~eiv~~l~~p~~~~~~g~~~prgVLL~GPPGTGKT~LArAlA~e~------g~pf~~v 321 (720)
.++..|.+|+|++|++++++.++..+. .. ..| ++||+||||||||++++++|+++ ......+
T Consensus 3 ~~ky~P~~~~diig~~~~~~~l~~~i~---~~--------~~~-~lll~Gp~G~GKTtl~~~i~~~l~~~~~~~~~~~~~ 70 (237)
T d1sxjd2 3 VEKYRPKNLDEVTAQDHAVTVLKKTLK---SA--------NLP-HMLFYGPPGTGKTSTILALTKELYGPDLMKSRILEL 70 (237)
T ss_dssp HHHTCCSSTTTCCSCCTTHHHHHHHTT---CT--------TCC-CEEEECSTTSSHHHHHHHHHHHHHHHHHHTTSEEEE
T ss_pred chhhCCCCHHHccCcHHHHHHHHHHHH---cC--------CCC-eEEEECCCCCChHHHHHHHHHHHcCCcccccchhhe
Confidence 456788999999999999988776553 22 122 59999999999999999999986 4566666
Q ss_pred echhhHHHHhhhchHHHHHH------------HHHHHhcCCeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhhhcC
Q 005003 322 SGSEFVEMFVGVGASRVRDL------------FKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDG 389 (720)
Q Consensus 322 s~s~~~~~~~G~~~~~vr~l------------F~~A~~~~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~ldg 389 (720)
+++....... ....+.+. ..........+++|||+|.+. .. ..+.++..++.
T Consensus 71 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~viiiDe~d~l~-----------~~---~~~~l~~~~~~ 134 (237)
T d1sxjd2 71 NASDERGISI--VREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMT-----------AD---AQSALRRTMET 134 (237)
T ss_dssp CSSSCCCHHH--HTTHHHHHHHSCCCCCCTTHHHHSCCCSCEEEEETTGGGSC-----------HH---HHHHHHHHHHH
T ss_pred eccccccchH--HHHHHHHHhhhhhhhhhHHHHhhccccCceEEEEecccccC-----------HH---HHHHHhhcccc
Confidence 6544321100 00111111 111112233599999999983 22 23334443332
Q ss_pred ccCCCcEEEEEEeCCCCccchhhcCCCcccceeeecCCCHHHHHHHHHHhhcCCCCc-ccccHHHHHHhCCCCcHHHHHH
Q 005003 390 FEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFD-ADVSLDVIAMRTPGFSGADLAN 468 (720)
Q Consensus 390 ~~~~~~ViVIaaTN~p~~LD~ALlrpgRFdr~I~i~~Pd~~eR~~IL~~~l~~~~l~-~dvdl~~LA~~t~G~SgadL~~ 468 (720)
.....++|.+++..+.+.+++.+ |+ ..+.|+.|+.++...+++..+.+..+. .+..++.+++.+.| +.+.+-+
T Consensus 135 --~~~~~~~i~~~~~~~~~~~~l~s--r~-~~i~f~~~~~~~~~~~L~~i~~~e~i~i~~~~l~~ia~~s~g-d~R~ai~ 208 (237)
T d1sxjd2 135 --YSGVTRFCLICNYVTRIIDPLAS--QC-SKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAG-DLRRGIT 208 (237)
T ss_dssp --TTTTEEEEEEESCGGGSCHHHHH--HS-EEEECCCCCHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHTSS-CHHHHHH
T ss_pred --ccccccccccccccccccccccc--hh-hhhccccccccccchhhhhhhhhhcCcCCHHHHHHHHHHcCC-CHHHHHH
Confidence 24556788888988899999998 88 588999999999999999887765543 22337888888876 6677777
Q ss_pred HHHHHHHHHHHhC-CCccCHHHHHHHH
Q 005003 469 LLNEAAILAGRRG-KAAISSKEIDDSI 494 (720)
Q Consensus 469 lv~eAa~~A~r~~-~~~It~~dl~~Al 494 (720)
+++.++..+...+ ...||.+++++++
T Consensus 209 ~L~~~~~~~~~~~~~~~It~~~i~e~~ 235 (237)
T d1sxjd2 209 LLQSASKGAQYLGDGKNITSTQVEELA 235 (237)
T ss_dssp HHHHTHHHHHHHCSCCCCCHHHHHHHH
T ss_pred HHHHHHHhchhcCCCCccCHHHHHHhh
Confidence 8878777776554 4579999998764
No 20
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.69 E-value=1.1e-16 Score=159.45 Aligned_cols=206 Identities=17% Similarity=0.180 Sum_probs=142.5
Q ss_pred ccccCCCCCccccccchHHHHHHHHHHHHhcCchhhhhccCcCCceEEEEccCCChHHHHHHHHHHhcCC-----CEEEE
Q 005003 247 QMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGV-----PFFSI 321 (720)
Q Consensus 247 ~~~~~~~~~f~dI~G~de~k~eL~eiv~~l~~p~~~~~~g~~~prgVLL~GPPGTGKT~LArAlA~e~g~-----pf~~v 321 (720)
|.++..|.+|+|++|++++++.|++++..-+ .| ++||+||||+|||++|+.+|++++. .++.+
T Consensus 5 w~eKyrP~~~~d~ig~~~~~~~L~~~~~~~~-----------~~-~~ll~Gp~G~GKTt~a~~la~~l~~~~~~~~~~~~ 72 (224)
T d1sxjb2 5 WVEKYRPQVLSDIVGNKETIDRLQQIAKDGN-----------MP-HMIISGMPGIGKTTSVHCLAHELLGRSYADGVLEL 72 (224)
T ss_dssp HHHHTCCSSGGGCCSCTHHHHHHHHHHHSCC-----------CC-CEEEECSTTSSHHHHHHHHHHHHHGGGHHHHEEEE
T ss_pred hHhHhCCCCHHHhcCCHHHHHHHHHHHHcCC-----------CC-eEEEECCCCCCchhhHHHHHHHHhccccccccccc
Confidence 5677889999999999999999888775222 12 5999999999999999999998764 36677
Q ss_pred echhhHHHHhhhchHHHHHHHHHHHh-------cCCeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhhhcCccCCC
Q 005003 322 SGSEFVEMFVGVGASRVRDLFKKAKE-------NAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNT 394 (720)
Q Consensus 322 s~s~~~~~~~G~~~~~vr~lF~~A~~-------~~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~ldg~~~~~ 394 (720)
++++... ...++..+..... ....+++|||+|.+. .. ..+.|+..++. ...
T Consensus 73 n~~~~~~------~~~i~~~~~~~~~~~~~~~~~~~kviiiDe~d~~~-----------~~---~~~~ll~~~e~--~~~ 130 (224)
T d1sxjb2 73 NASDDRG------IDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMT-----------AG---AQQALRRTMEL--YSN 130 (224)
T ss_dssp CTTSCCS------HHHHHTHHHHHHHBCCCCCTTCCEEEEEESGGGSC-----------HH---HHHTTHHHHHH--TTT
T ss_pred cccccCC------ceehhhHHHHHHHhhccCCCcceEEEEEecccccc-----------hh---HHHHHhhhccc--ccc
Confidence 7665332 1223333322211 234699999999983 22 23445555542 345
Q ss_pred cEEEEEEeCCCCccchhhcCCCcccceeeecCCCHHHHHHHHHHhhcCCCCcc-cccHHHHHHhCCCCcHHHHHHHHHHH
Q 005003 395 GIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDA-DVSLDVIAMRTPGFSGADLANLLNEA 473 (720)
Q Consensus 395 ~ViVIaaTN~p~~LD~ALlrpgRFdr~I~i~~Pd~~eR~~IL~~~l~~~~l~~-dvdl~~LA~~t~G~SgadL~~lv~eA 473 (720)
..+++.+||..+.+.+++++ |+. .+.++.|+.++...++...+....+.. +-.++.++..+.| +.+..-+.++.+
T Consensus 131 ~~~~i~~~~~~~~i~~~l~s--r~~-~i~~~~~~~~~i~~~l~~i~~~e~~~i~~~~l~~I~~~s~G-d~R~ai~~Lq~~ 206 (224)
T d1sxjb2 131 STRFAFACNQSNKIIEPLQS--QCA-ILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEG-DMRQAINNLQST 206 (224)
T ss_dssp TEEEEEEESCGGGSCHHHHT--TSE-EEECCCCCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHHTT-CHHHHHHHHHHH
T ss_pred ceeeeeccCchhhhhhHHHH--HHH-HhhhcccchhhhHHHHHHHHHhcccCCCHHHHHHHHHHcCC-cHHHHHHHHHHH
Confidence 67888899999999999999 774 799999999999999987775433322 2236778887765 444444444433
Q ss_pred HHHHHHhCCCccCHHHHHHHHH
Q 005003 474 AILAGRRGKAAISSKEIDDSID 495 (720)
Q Consensus 474 a~~A~r~~~~~It~~dl~~Al~ 495 (720)
.. +...|+.+++.+.++
T Consensus 207 ---~~--~~~~i~~~~i~~~~d 223 (224)
T d1sxjb2 207 ---VA--GHGLVNADNVFKIVD 223 (224)
T ss_dssp ---HH--HHSSBCHHHHHHHHT
T ss_pred ---HH--cCCCcCHHHHHHHhC
Confidence 22 345788888877654
No 21
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.66 E-value=2.5e-16 Score=158.16 Aligned_cols=193 Identities=18% Similarity=0.190 Sum_probs=121.0
Q ss_pred ccccCCCCCccccccchHHHHHHHHHHHHhcCchhhhhccCcCCceEEEEccCCChHHHHHHHHHHhcCC---CEEEEec
Q 005003 247 QMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGV---PFFSISG 323 (720)
Q Consensus 247 ~~~~~~~~~f~dI~G~de~k~eL~eiv~~l~~p~~~~~~g~~~prgVLL~GPPGTGKT~LArAlA~e~g~---pf~~vs~ 323 (720)
|.+++.+.+|+|++|.+++++.|++.+. .+ ..+.++|||||||||||++|+++|+++.. ....+++
T Consensus 1 W~eky~P~~~~diig~~~~~~~L~~~~~---~~--------~~~~~lll~Gp~G~GKTt~~~~la~~l~~~~~~~~~~~~ 69 (252)
T d1sxje2 1 WVDKYRPKSLNALSHNEELTNFLKSLSD---QP--------RDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDV 69 (252)
T ss_dssp CTTTTCCCSGGGCCSCHHHHHHHHTTTT---CT--------TCCCCEEEECSTTSSHHHHHHTHHHHHSCTTCCC-----
T ss_pred CCcccCCCCHHHccCcHHHHHHHHHHHH---cC--------CCCCeEEEECCCCCCHHHHHHHHHHhhcCcccccccccc
Confidence 4678888999999999999888875543 11 12336999999999999999999998621 1111111
Q ss_pred hhhHHH---------------------Hhhh-chHHHHHHHHHH--------------HhcCCeEEEEccchhcccccCC
Q 005003 324 SEFVEM---------------------FVGV-GASRVRDLFKKA--------------KENAPCIVFVDEIDAVGRQRGT 367 (720)
Q Consensus 324 s~~~~~---------------------~~G~-~~~~vr~lF~~A--------------~~~~P~ILfIDEID~l~~~r~~ 367 (720)
..+... ..+. ............ ......+++|||+|.+.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiiide~d~l~----- 144 (252)
T d1sxje2 70 RQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLT----- 144 (252)
T ss_dssp -------------CCEECSSEEEECCC----CCHHHHHHHHHHHTTTTC------------CCEEEEEECTTSSC-----
T ss_pred ccccccccchhhhhhccCCccceeeecccccCCcceeeehhhhhhhhhhhhhhhcccccCCCceEEEeccccccc-----
Confidence 111100 0000 001111111111 11224589999999982
Q ss_pred CCCCCChHHHHHHHHHHhhhcCccCCCcEEEEEEeCCCCccchhhcCCCcccceeeecCCCHHHHHHHHHHhhcCC--CC
Q 005003 368 GIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNK--KF 445 (720)
Q Consensus 368 ~~~~~~~e~~~~ln~LL~~ldg~~~~~~ViVIaaTN~p~~LD~ALlrpgRFdr~I~i~~Pd~~eR~~IL~~~l~~~--~l 445 (720)
.. ..+.++..++. ...++.+|++||.++.+++++++ |+. .|+++.|+.++..++++..+... ..
T Consensus 145 ------~~---~~~~l~~~~e~--~~~~~~~Il~tn~~~~i~~~l~s--R~~-~i~~~~~~~~~~~~~l~~i~~~e~~~~ 210 (252)
T d1sxje2 145 ------KD---AQAALRRTMEK--YSKNIRLIMVCDSMSPIIAPIKS--QCL-LIRCPAPSDSEISTILSDVVTNERIQL 210 (252)
T ss_dssp ------HH---HHHHHHHHHHH--STTTEEEEEEESCSCSSCHHHHT--TSE-EEECCCCCHHHHHHHHHHHHHHHTCEE
T ss_pred ------cc---cchhhhccccc--ccccccceeeeccccchhhhhhc--chh-eeeecccchhhHHHHHHHHHHHcCCCC
Confidence 22 33445555543 34568899999999999999998 884 89999999999999998776543 33
Q ss_pred cccccHHHHHHhCCCCcHHHHHHHHHHH
Q 005003 446 DADVSLDVIAMRTPGFSGADLANLLNEA 473 (720)
Q Consensus 446 ~~dvdl~~LA~~t~G~SgadL~~lv~eA 473 (720)
..+..++.++..+.| |++.+++..
T Consensus 211 ~~~~~l~~i~~~s~G----d~R~ai~~L 234 (252)
T d1sxje2 211 ETKDILKRIAQASNG----NLRVSLLML 234 (252)
T ss_dssp CCSHHHHHHHHHHTT----CHHHHHHHH
T ss_pred CcHHHHHHHHHHcCC----cHHHHHHHH
Confidence 333346778887765 455555433
No 22
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=99.60 E-value=7.8e-15 Score=154.68 Aligned_cols=220 Identities=20% Similarity=0.278 Sum_probs=140.8
Q ss_pred CCCCccccccchHHHHHHHHHHHHhcCchhhhhccCcCCceEEEEccCCChHHHHHHHHHHhc-----------------
Q 005003 252 TGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEA----------------- 314 (720)
Q Consensus 252 ~~~~f~dI~G~de~k~eL~eiv~~l~~p~~~~~~g~~~prgVLL~GPPGTGKT~LArAlA~e~----------------- 314 (720)
+.+.|.||+|++++|+.+.-.+. .+. ..++||+||||||||++||+++.-+
T Consensus 2 ~~~~f~~I~Gq~~~kral~laa~---~~~---------~h~vLl~G~pG~GKT~lar~~~~iLp~~~~~~~~~~~~~~~~ 69 (333)
T d1g8pa_ 2 PVFPFSAIVGQEDMKLALLLTAV---DPG---------IGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVE 69 (333)
T ss_dssp CCCCGGGSCSCHHHHHHHHHHHH---CGG---------GCCEEEECCGGGCTTHHHHHHHHHSCCEEEETTCTTCCSSGG
T ss_pred CCCChhhccCcHHHHHHHHHHHh---ccC---------CCeEEEECCCCccHHHHHHHHHHhCCCchhhccCccccCccc
Confidence 34679999999999997664332 111 1279999999999999999999744
Q ss_pred ----------------CCCEEEEechhhHHHHhhhchH-HH---------HHHHHHHHhcCCeEEEEccchhcccccCCC
Q 005003 315 ----------------GVPFFSISGSEFVEMFVGVGAS-RV---------RDLFKKAKENAPCIVFVDEIDAVGRQRGTG 368 (720)
Q Consensus 315 ----------------g~pf~~vs~s~~~~~~~G~~~~-~v---------r~lF~~A~~~~P~ILfIDEID~l~~~r~~~ 368 (720)
..|++....+.-.+...|...- .. ...+..| ...|+||||++.+.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~g~~~~~~G~l~~A---~~gvl~iDEi~~~~------ 140 (333)
T d1g8pa_ 70 MIPDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARA---NRGYLYIDECNLLE------ 140 (333)
T ss_dssp GSCTTCCCSCCCEEEECCCEEEECTTCCHHHHHCEECHHHHHHHCGGGEECCHHHHH---TTEEEEETTGGGSC------
T ss_pred cccchhhccccCcccccCceeeccCCCCcccccCcchhhhccccCcceeeccccccc---cccEeecccHHHHH------
Confidence 1233333222111222221100 00 0122222 13699999999982
Q ss_pred CCCCChHHHHHHHHHHhhhcCcc-----------CCCcEEEEEEeCCC-CccchhhcCCCcccceeeecCC-CHHHHHHH
Q 005003 369 IGGGNDEREQTLNQLLTEMDGFE-----------GNTGIIVIAATNRA-DILDSALLRPGRFDRQVTVDVP-DIRGRTEI 435 (720)
Q Consensus 369 ~~~~~~e~~~~ln~LL~~ldg~~-----------~~~~ViVIaaTN~p-~~LD~ALlrpgRFdr~I~i~~P-d~~eR~~I 435 (720)
..+++.|++-|+.-. ....+++|+|+|.. ..+++++++ ||+..+.++.| +...+.++
T Consensus 141 --------~~~~~aLl~~me~~~v~i~r~g~~~~~p~~f~liaa~Np~~~~l~~~llD--Rf~~~i~v~~~~~~~~~~~~ 210 (333)
T d1g8pa_ 141 --------DHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEGDLRPQLLD--RFGLSVEVLSPRDVETRVEV 210 (333)
T ss_dssp --------HHHHHHHHHHHHHSEEEECCTTCCEEEECCEEEEEEECSCSCCCCHHHHT--TCSEEEECCCCCSHHHHHHH
T ss_pred --------HHHHHHHhhhhcCCeEEecccCceecCCCCEEEEEecCccccccccchhh--hhcceeeccCcchhhHHHHH
Confidence 346777777775321 12358999999974 479999999 99999999877 45555444
Q ss_pred HHHhh-------------------------------cCCCCcccc--cHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhCC
Q 005003 436 LKVHG-------------------------------SNKKFDADV--SLDVIAMRTPGFSGADLANLLNEAAILAGRRGK 482 (720)
Q Consensus 436 L~~~l-------------------------------~~~~l~~dv--dl~~LA~~t~G~SgadL~~lv~eAa~~A~r~~~ 482 (720)
..... .......+. ............|.+-...+++-|..+|..+|+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~S~R~~~~llrvArtiA~L~gr 290 (333)
T d1g8pa_ 211 IRRRDTYDADPKAFLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGA 290 (333)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHGGGCBCCHHHHHHHHHHHHHSSSCSHHHHHHHHHHHHHHHHHTTC
T ss_pred HHhhhhcccChHHHHHHHHHHHHHHHHHHHHHhhcccceecCHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHcCC
Confidence 42211 111111111 122333344556888889999999999999999
Q ss_pred CccCHHHHHHHHHHHHcCcc
Q 005003 483 AAISSKEIDDSIDRIVAGME 502 (720)
Q Consensus 483 ~~It~~dl~~Al~~v~~~~~ 502 (720)
+.|+.+|+.+|+.-++....
T Consensus 291 ~~V~~~di~~a~~lvL~hR~ 310 (333)
T d1g8pa_ 291 TAVGRDHLKRVATMALSHRL 310 (333)
T ss_dssp SBCCHHHHHHHHHHHHGGGC
T ss_pred CCCCHHHHHHHHHHHHHhhc
Confidence 99999999999887765543
No 23
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.58 E-value=7.6e-15 Score=150.88 Aligned_cols=218 Identities=22% Similarity=0.347 Sum_probs=148.9
Q ss_pred CccccccchHHHHHHHHHHHHhcCchhhhhccCcCCceEEEEccCCChHHHHHHHHHHhc----------CCCEEEEech
Q 005003 255 TFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEA----------GVPFFSISGS 324 (720)
Q Consensus 255 ~f~dI~G~de~k~eL~eiv~~l~~p~~~~~~g~~~prgVLL~GPPGTGKT~LArAlA~e~----------g~pf~~vs~s 324 (720)
.++.++|.++..+++.+++..- ...+++|.||||+|||.+++.+|... +..++.++.+
T Consensus 16 ~ld~~igRd~Ei~~l~~iL~r~------------~k~n~lLVG~~GvGKTalv~~la~ri~~~~vp~~l~~~~i~~l~~~ 83 (268)
T d1r6bx2 16 GIDPLIGREKELERAIQVLCRR------------RKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIG 83 (268)
T ss_dssp CSCCCCSCHHHHHHHHHHHTSS------------SSCEEEEECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEECCCC
T ss_pred CCCcccChHHHHHHHHHHHhcC------------ccCCcEEECCCCCcHHHHHHHHHHHHHhCCcccccccceeEEeeec
Confidence 5778999998777666665311 12379999999999999999999752 5679999999
Q ss_pred hhHH--HHhhhchHHHHHHHHHHHhcCCeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhhhcCccCCCcEEEEEEe
Q 005003 325 EFVE--MFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAAT 402 (720)
Q Consensus 325 ~~~~--~~~G~~~~~vr~lF~~A~~~~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~ldg~~~~~~ViVIaaT 402 (720)
.++. .|.|.-+.+++.+++.+....++|+||||++.+....+. ++. ....-+ +| ..+-.++.+.+|++|
T Consensus 84 ~liag~~~~g~~e~r~~~i~~~~~~~~~iIlfiDeih~l~~~g~~---~g~--~~d~a~-~L---kp~L~rg~i~vIgat 154 (268)
T d1r6bx2 84 SLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAA---SGG--QVDAAN-LI---KPLLSSGKIRVIGST 154 (268)
T ss_dssp ---CCCCCSSCHHHHHHHHHHHHSSSSCEEEEETTTTTTTTSCCS---SSC--HHHHHH-HH---SSCSSSCCCEEEEEE
T ss_pred hHhccCccchhHHHHHHHHHHHhhccCCceEEecchHHHhcCCCC---CCc--cccHHH-Hh---hHHHhCCCCeEEEeC
Confidence 9885 678889999999999998888899999999999654221 111 112222 22 233347789999999
Q ss_pred CCC-----CccchhhcCCCcccceeeecCCCHHHHHHHHHHhhcC------CCCcccccHHH---HHHh--CCCCcHHHH
Q 005003 403 NRA-----DILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSN------KKFDADVSLDV---IAMR--TPGFSGADL 466 (720)
Q Consensus 403 N~p-----~~LD~ALlrpgRFdr~I~i~~Pd~~eR~~IL~~~l~~------~~l~~dvdl~~---LA~~--t~G~SgadL 466 (720)
... ..-|++|.| ||. .|.++.|+.++-.+|++..... ..+.++. +.. ++.+ ...+-|.-.
T Consensus 155 T~eey~~~~e~d~al~r--rF~-~I~V~Eps~e~t~~IL~~~~~~~e~~h~v~~~~~a-l~~~v~ls~ryi~~~~~PdKA 230 (268)
T d1r6bx2 155 TYQEFSNIFEKDRALAR--RFQ-KIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKA-VRAAVELAVKYINDRHLPDKA 230 (268)
T ss_dssp CHHHHHCCCCCTTSSGG--GEE-EEECCCCCHHHHHHHHHHHHHHHHHHHTCCCCHHH-HHHHHHHHHHHCTTSCTTHHH
T ss_pred CHHHHHHHHhhcHHHHh--hhc-ccccCCCCHHHHHHHHHHhhHHHhccCCEEeChHH-HHHHHHHHHhhccCCCCCcHH
Confidence 742 255899999 997 8999999999999999764432 2222221 222 2222 122223344
Q ss_pred HHHHHHHHHHHHHh----CCCccCHHHHHHHHHHH
Q 005003 467 ANLLNEAAILAGRR----GKAAISSKEIDDSIDRI 497 (720)
Q Consensus 467 ~~lv~eAa~~A~r~----~~~~It~~dl~~Al~~v 497 (720)
-.++.+|+..+... .+..|+.+|++..+.++
T Consensus 231 IdllDea~a~~~~~~~~~~~~~i~~~di~~~i~~~ 265 (268)
T d1r6bx2 231 IDVIDEAGARARLMPVSKRKKTVNVADIESVVARI 265 (268)
T ss_dssp HHHHHHHHHHHHHSSSCCCCCSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccccCcccCCHHHHHHHHHHH
Confidence 45788888777543 23467888888777664
No 24
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=99.58 E-value=2.8e-14 Score=141.93 Aligned_cols=194 Identities=18% Similarity=0.269 Sum_probs=129.2
Q ss_pred CCCCccccc-c--chHHHHHHHHHHHHhcCchhhhhccCcCCceEEEEccCCChHHHHHHHHHHhc---CCCEEEEechh
Q 005003 252 TGVTFDDVA-G--VDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEA---GVPFFSISGSE 325 (720)
Q Consensus 252 ~~~~f~dI~-G--~de~k~eL~eiv~~l~~p~~~~~~g~~~prgVLL~GPPGTGKT~LArAlA~e~---g~pf~~vs~s~ 325 (720)
+..||++.+ | ...+...++++++ .+.. ..++++||||||||||+|++|+|+++ +..+++++..+
T Consensus 5 ~~~tFdnF~vg~~N~~a~~~~~~~~~---~~~~-------~~n~l~l~G~~G~GKTHLl~A~~~~~~~~~~~~~~~~~~~ 74 (213)
T d1l8qa2 5 PKYTLENFIVGEGNRLAYEVVKEALE---NLGS-------LYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADD 74 (213)
T ss_dssp TTCCSSSCCCCTTTHHHHHHHHHHHH---TTTT-------SCSSEEEECSSSSSHHHHHHHHHHHHHHTTCCEEEEEHHH
T ss_pred CCCChhhccCCCcHHHHHHHHHHHHh---CcCC-------CCCcEEEECCCCCcHHHHHHHHHHHhccCccceEEechHH
Confidence 567999976 4 3334444444443 3221 12359999999999999999999876 67899999998
Q ss_pred hHHHHhhhchH-HHHHHHHHHHhcCCeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhhhcCccCCCcEEEEEEeCC
Q 005003 326 FVEMFVGVGAS-RVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNR 404 (720)
Q Consensus 326 ~~~~~~G~~~~-~vr~lF~~A~~~~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~ldg~~~~~~ViVIaaTN~ 404 (720)
+...+...-.. ...++++..+ ...+|+|||||.+. +....+..+..++..+ ...++.+++++...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~--~~dll~iDDi~~i~---------~~~~~~~~lf~lin~~---~~~~~~iiits~~~ 140 (213)
T d1l8qa2 75 FAQAMVEHLKKGTINEFRNMYK--SVDLLLLDDVQFLS---------GKERTQIEFFHIFNTL---YLLEKQIILASDRH 140 (213)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHH--TCSEEEEECGGGGT---------TCHHHHHHHHHHHHHH---HHTTCEEEEEESSC
T ss_pred HHHHHHHHHHccchhhHHHHHh--hccchhhhhhhhhc---------CchHHHHHHHHHHHHH---hhccceEEEecCCc
Confidence 87755433221 1223333332 23699999999994 2344555555555543 33556677777777
Q ss_pred CCcc---chhhcCCCcccc--eeeecCCCHHHHHHHHHHhhcCCCCccc-ccHHHHHHhCCCCcHHHHHHHHHHHH
Q 005003 405 ADIL---DSALLRPGRFDR--QVTVDVPDIRGRTEILKVHGSNKKFDAD-VSLDVIAMRTPGFSGADLANLLNEAA 474 (720)
Q Consensus 405 p~~L---D~ALlrpgRFdr--~I~i~~Pd~~eR~~IL~~~l~~~~l~~d-vdl~~LA~~t~G~SgadL~~lv~eAa 474 (720)
|..+ .+.|.+ |+.. .+.++ |+.++|.++++.++....+.-+ ..++.+++++. +.+||+.+++.-.
T Consensus 141 p~~l~~~~~dL~S--RL~~g~~~~i~-p~d~~~~~iL~~~a~~rgl~l~~~v~~yl~~~~~--~~R~L~~~l~~l~ 211 (213)
T d1l8qa2 141 PQKLDGVSDRLVS--RFEGGILVEIE-LDNKTRFKIIKEKLKEFNLELRKEVIDYLLENTK--NVREIEGKIKLIK 211 (213)
T ss_dssp GGGCTTSCHHHHH--HHHTSEEEECC-CCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHCS--SHHHHHHHHHHHH
T ss_pred chhccccchHHHH--HhhCceEEEEC-CCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHhcC--cHHHHHHHHHHhh
Confidence 7654 467877 7755 66776 6778899999998876655432 23777888874 6899999887654
No 25
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.50 E-value=2.4e-14 Score=140.12 Aligned_cols=157 Identities=24% Similarity=0.405 Sum_probs=115.5
Q ss_pred CccccccchHHHHHHHHHHHHhcCchhhhhccCcCCceEEEEccCCChHHHHHHHHHHhc----------CCCEEEEech
Q 005003 255 TFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEA----------GVPFFSISGS 324 (720)
Q Consensus 255 ~f~dI~G~de~k~eL~eiv~~l~~p~~~~~~g~~~prgVLL~GPPGTGKT~LArAlA~e~----------g~pf~~vs~s 324 (720)
.++-++|.++..+++.+++..-. ..+++|+||||+|||.+++.+|... +..++.++.+
T Consensus 20 ~ld~~igRd~Ei~~l~~iL~r~~------------k~n~lLvG~pGVGKTalv~~LA~ri~~~~vp~~L~~~~i~~ld~~ 87 (195)
T d1jbka_ 20 KLDPVIGRDEEIRRTIQVLQRRT------------KNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMG 87 (195)
T ss_dssp CSCCCCSCHHHHHHHHHHHTSSS------------SCEEEEECCTTSCHHHHHHHHHHHHHHTCSCGGGTTCEEEEECHH
T ss_pred CCCCCcCcHHHHHHHHHHHhccC------------CCCeEEEecCCcccHHHHHHHHHHHHhCCCCHHHcCceEEEeeHH
Confidence 57789999887776665553211 2379999999999999999999743 5779999999
Q ss_pred hhHH--HHhhhchHHHHHHHHHHHhcC-CeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhhhcCccCCCcEEEEEE
Q 005003 325 EFVE--MFVGVGASRVRDLFKKAKENA-PCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAA 401 (720)
Q Consensus 325 ~~~~--~~~G~~~~~vr~lF~~A~~~~-P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~ldg~~~~~~ViVIaa 401 (720)
.++. +|.|+.+.++..+++.+.+.. +.||||||++.+...... .++. .....+.-.|. ++.+.+|++
T Consensus 88 ~LiAg~~~rG~~E~rl~~il~e~~~~~~~iILfIDeih~l~~~g~~--~g~~-d~~~~Lkp~L~-------rg~l~~Iga 157 (195)
T d1jbka_ 88 ALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA--DGAM-DAGNMLKPALA-------RGELHCVGA 157 (195)
T ss_dssp HHHTTTCSHHHHHHHHHHHHHHHHHSTTTEEEEEETGGGGTT--------CC-CCHHHHHHHHH-------TTSCCEEEE
T ss_pred HHhccCCccHHHHHHHHHHHHHHhcCCCcEEEEcchHHHHhcCCCC--CCcc-cHHHHHHHHHh-------CCCceEEec
Confidence 9984 567888999999999886554 689999999999654322 1111 12334444443 567889998
Q ss_pred eCCCC-----ccchhhcCCCcccceeeecCCCHHHHHHHH
Q 005003 402 TNRAD-----ILDSALLRPGRFDRQVTVDVPDIRGRTEIL 436 (720)
Q Consensus 402 TN~p~-----~LD~ALlrpgRFdr~I~i~~Pd~~eR~~IL 436 (720)
|...+ .-|++|.| ||. .|.+..|+.++-.+|+
T Consensus 158 tT~eey~~~~e~d~aL~r--rF~-~I~V~Ep~~e~t~~IL 194 (195)
T d1jbka_ 158 TTLDEYRQYIEKDAALER--RFQ-KVFVAEPSVEDTIAIL 194 (195)
T ss_dssp ECHHHHHHHTTTCHHHHT--TEE-EEECCCCCHHHHHTTC
T ss_pred CCHHHHHHHHHcCHHHHh--cCC-EeecCCCCHHHHHHHh
Confidence 87432 44899999 997 8999999998877665
No 26
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.41 E-value=9.3e-13 Score=138.24 Aligned_cols=167 Identities=19% Similarity=0.277 Sum_probs=113.1
Q ss_pred cccccchHHHHHHHHHHHHhcCchhhhhccCcCCc-eEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHHH-----H
Q 005003 257 DDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPK-GVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM-----F 330 (720)
Q Consensus 257 ~dI~G~de~k~eL~eiv~~l~~p~~~~~~g~~~pr-gVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~~-----~ 330 (720)
..|+|++++++.+.+.+...+..- . ....|. .+||+||||+|||.||+++|..++.||+.++++++.+. +
T Consensus 22 ~~viGQ~~a~~~v~~~v~~~~~~l--~--~~~~p~~~~lf~Gp~GvGKT~lak~la~~l~~~~i~~d~s~~~~~~~~~~l 97 (315)
T d1r6bx3 22 MLVFGQDKAIEALTEAIKMARAGL--G--HEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRL 97 (315)
T ss_dssp TTSCSCHHHHHHHHHHHHHHHTTC--S--CTTSCSEEEEEECSTTSSHHHHHHHHHHHHTCEEEEEEGGGCSSSSCCSSS
T ss_pred CeecChHHHHHHHHHHHHHHHccC--C--CCCCCceEEEEECCCcchhHHHHHHHHhhccCCeeEeccccccchhhhhhh
Confidence 578999999999999876432110 0 012244 58899999999999999999999999999999998652 2
Q ss_pred hhhchHH-----HHHHHHHHHhcCCeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhhh---cCc---cCCCcEEEE
Q 005003 331 VGVGASR-----VRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEM---DGF---EGNTGIIVI 399 (720)
Q Consensus 331 ~G~~~~~-----vr~lF~~A~~~~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~l---dg~---~~~~~ViVI 399 (720)
.|..... -..+....+.+..+|+++||||.. +......+.+++..- |+. ....+.++|
T Consensus 98 ~g~~~gy~g~~~~~~l~~~~~~~~~~vvl~DeieKa-----------~~~V~~~lLqild~G~ltd~~Gr~vdf~n~iiI 166 (315)
T d1r6bx3 98 IGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKA-----------HPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 166 (315)
T ss_dssp CCCCSCSHHHHHTTHHHHHHHHCSSEEEEEETGGGS-----------CHHHHHHHHHHHHHSEEEETTTEEEECTTEEEE
T ss_pred cccCCCccccccCChhhHHHHhCccchhhhcccccc-----------cchHhhhhHHhhccceecCCCCCccCccceEEE
Confidence 2221111 112344455677799999999997 233334444444321 111 123468999
Q ss_pred EEeCCC-------------------------CccchhhcCCCcccceeeecCCCHHHHHHHHHHhh
Q 005003 400 AATNRA-------------------------DILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHG 440 (720)
Q Consensus 400 aaTN~p-------------------------~~LD~ALlrpgRFdr~I~i~~Pd~~eR~~IL~~~l 440 (720)
+|+|-- ..+.|.++. |+|..+.+.+.+.++..+|+...+
T Consensus 167 ~Tsnig~~~i~~~~~~~~~~~~~~~~~~~l~~~f~pEfln--Rid~ii~f~~l~~~~~~~I~~~~l 230 (315)
T d1r6bx3 167 MTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRN--RLDNIIWFDHLSTDVIHQVVDKFI 230 (315)
T ss_dssp EEECSSCC-----------------CHHHHHHHSCHHHHT--TCSEEEECCCCCHHHHHHHHHHHH
T ss_pred eccchhhHHHHhhhccchhhhhhHhHHHHHHHhcCHHHHh--hhhhhhcccchhhhHHHHHHHHHH
Confidence 999942 135667777 899888888888888888876544
No 27
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.37 E-value=1.9e-12 Score=139.33 Aligned_cols=164 Identities=24% Similarity=0.376 Sum_probs=107.5
Q ss_pred CCccccccchHHHHHHHHHHHHhcCchhhhhccCcCCceEEEEccCCChHHHHHHHHHHhc----------CCCEEEEec
Q 005003 254 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEA----------GVPFFSISG 323 (720)
Q Consensus 254 ~~f~dI~G~de~k~eL~eiv~~l~~p~~~~~~g~~~prgVLL~GPPGTGKT~LArAlA~e~----------g~pf~~vs~ 323 (720)
-.++-++|.++..+++.+++..- -..+++|.||||+|||.++..+|... +..++.++.
T Consensus 19 g~ld~~~gr~~ei~~~~~~L~r~------------~k~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~i~~ld~ 86 (387)
T d1qvra2 19 GKLDPVIGRDEEIRRVIQILLRR------------TKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQM 86 (387)
T ss_dssp TCSCCCCSCHHHHHHHHHHHHCS------------SCCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCEEEEECC
T ss_pred CCCCCCcCcHHHHHHHHHHHhcC------------CCCCCeEECCCCCCHHHHHHHHHHHHHhCCCCHHHcCceEEEeeH
Confidence 35788999998888777766421 12368999999999999999998743 356999999
Q ss_pred hhhHH--HHhhhchHHHHHHHHHHHhcC-CeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhhhcCccCCCcEEEEE
Q 005003 324 SEFVE--MFVGVGASRVRDLFKKAKENA-PCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIA 400 (720)
Q Consensus 324 s~~~~--~~~G~~~~~vr~lF~~A~~~~-P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~ldg~~~~~~ViVIa 400 (720)
+.++. .|.|..+.++..++..+.... ++||||||++.+.+..+. ++.......+...|. ++.+.+|+
T Consensus 87 ~~l~ag~~~~g~~e~r~~~i~~~~~~~~~~~ilfide~h~l~~~g~~---~g~~d~a~~Lkp~L~-------rg~~~~I~ 156 (387)
T d1qvra2 87 GSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKA---EGAVDAGNMLKPALA-------RGELRLIG 156 (387)
T ss_dssp -----------CHHHHHHHHHHHHHTTCSSEEEEECCC----------------------HHHHH-------TTCCCEEE
T ss_pred hhhhcccCcchhHHHHHHHHHHHhccCCCceEEEeccHHHHhcCCCC---CCcccHHHHHHHHHh-------CCCcceee
Confidence 99985 678899999999999987764 688999999999654321 111122233333333 56788999
Q ss_pred EeCCCC----ccchhhcCCCcccceeeecCCCHHHHHHHHHHhhcC
Q 005003 401 ATNRAD----ILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSN 442 (720)
Q Consensus 401 aTN~p~----~LD~ALlrpgRFdr~I~i~~Pd~~eR~~IL~~~l~~ 442 (720)
+|...+ .=|++|.| ||. .|.|+.|+.++-..|++.....
T Consensus 157 ~tT~~ey~~~e~d~al~r--rF~-~v~v~ep~~~~~~~il~~~~~~ 199 (387)
T d1qvra2 157 ATTLDEYREIEKDPALER--RFQ-PVYVDEPTVEETISILRGLKEK 199 (387)
T ss_dssp EECHHHHHHHTTCTTTCS--CCC-CEEECCCCHHHHHHHHHHHHHH
T ss_pred ecCHHHHHHhcccHHHHH--hcc-cccCCCCcHHHHHHHHHHHHHH
Confidence 986321 23899999 997 8999999999999999866543
No 28
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.36 E-value=1.3e-12 Score=137.15 Aligned_cols=164 Identities=22% Similarity=0.330 Sum_probs=110.9
Q ss_pred cccccchHHHHHHHHHHHHhcCchhhhhccCcCCc-eEEEEccCCChHHHHHHHHHHhc---CCCEEEEechhhHHH---
Q 005003 257 DDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPK-GVLLVGPPGTGKTLLAKAIAGEA---GVPFFSISGSEFVEM--- 329 (720)
Q Consensus 257 ~dI~G~de~k~eL~eiv~~l~~p~~~~~~g~~~pr-gVLL~GPPGTGKT~LArAlA~e~---g~pf~~vs~s~~~~~--- 329 (720)
+.|+|++++++.+.+.+......- -....|. .+||+||+|+|||.+|+.+|..+ +.+++.++++++.+.
T Consensus 23 ~~v~GQ~~ai~~v~~~i~~~~~~l----~~~~kp~~~~lf~Gp~G~GKt~lak~la~~l~~~~~~~~~~~~~~~~~~~~~ 98 (315)
T d1qvra3 23 KRVVGQDEAIRAVADAIRRARAGL----KDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAV 98 (315)
T ss_dssp HHSCSCHHHHHHHHHHHHHHGGGC----SCSSSCSEEEEEBSCSSSSHHHHHHHHHHHHHSSGGGEEEECTTTCCSSGGG
T ss_pred CeEeCHHHHHHHHHHHHHHHhcCC----CCCCCCceEEEEECCCcchHHHHHHHHHHHhcCCCcceEEEeccccccchhh
Confidence 468999999999988776432110 0112355 46888999999999999999987 789999999887642
Q ss_pred --HhhhchH-----HHHHHHHHHHhcCCeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhhhcCc---------cCC
Q 005003 330 --FVGVGAS-----RVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGF---------EGN 393 (720)
Q Consensus 330 --~~G~~~~-----~vr~lF~~A~~~~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~ldg~---------~~~ 393 (720)
..|..+. .-..+.+..+++..|||++||||.. +... ++.|+..+|.- ..-
T Consensus 99 ~~L~g~~~gyvG~~~~~~l~~~~~~~p~~Vvl~DEieK~-----------~~~v---~~~ll~~l~~g~~~~~~gr~v~~ 164 (315)
T d1qvra3 99 SRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKA-----------HPDV---FNILLQILDDGRLTDSHGRTVDF 164 (315)
T ss_dssp GGC--------------CHHHHHHHCSSEEEEESSGGGS-----------CHHH---HHHHHHHHTTTEECCSSSCCEEC
T ss_pred hhhcCCCCCCcCcccCChHHHHHHhCCCcEEEEehHhhc-----------CHHH---HHHHHHHhccCceeCCCCcEecC
Confidence 2222211 1122444455666799999999997 3333 44444444321 112
Q ss_pred CcEEEEEEeCC--------------------------CCccchhhcCCCcccceeeecCCCHHHHHHHHHHhh
Q 005003 394 TGIIVIAATNR--------------------------ADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHG 440 (720)
Q Consensus 394 ~~ViVIaaTN~--------------------------p~~LD~ALlrpgRFdr~I~i~~Pd~~eR~~IL~~~l 440 (720)
.+.++|+|||- .+.+.|.++. |||..+.+.+.+.++..+|+...+
T Consensus 165 ~~~i~i~tsnlG~~~i~~~~~~~~~~~~~~~~~~~~l~~~f~pEfln--Rid~Ii~F~~L~~~~~~~I~~~~l 235 (315)
T d1qvra3 165 RNTVIILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLN--RLDEIVVFRPLTKEQIRQIVEIQL 235 (315)
T ss_dssp TTEEEEEECCTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTSCHHHHH--TCSBCCBCCCCCHHHHHHHHHHHH
T ss_pred cceEEEEecccChHHHhhhcccccchhhhhHHHHHHHHhhcCHHHHh--cCCeeeeccchhhhhhHHHHHHHH
Confidence 46899999995 2347778887 999888898889888888876544
No 29
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=99.35 E-value=4.6e-12 Score=135.45 Aligned_cols=180 Identities=25% Similarity=0.330 Sum_probs=110.3
Q ss_pred cccccchHHHHHHHHHHHH----hcCchhhhh--------------ccCcCCceEEEEccCCChHHHHHHHHHHhcCCCE
Q 005003 257 DDVAGVDEAKQDFMEVVEF----LKKPERFTA--------------IGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPF 318 (720)
Q Consensus 257 ~dI~G~de~k~eL~eiv~~----l~~p~~~~~--------------~g~~~prgVLL~GPPGTGKT~LArAlA~e~g~pf 318 (720)
.-|+|+++||+.+...+.. .+.+..... -.-.+|.++|+.||+|||||.+||++|..++.||
T Consensus 17 ~~ViGQd~Akkava~Avrn~~rR~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~niLfiGPTGvGKTElAk~LA~~~~~~~ 96 (364)
T d1um8a_ 17 NYVIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKSNILLIGPTGSGKTLMAQTLAKHLDIPI 96 (364)
T ss_dssp TTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHTTCCCCCEEEECCTTSSHHHHHHHHHHHTTCCE
T ss_pred CeecChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccCCCcceeeeCCCCccHHHHHHHHHhhcccce
Confidence 4589999999988776631 111111000 0134678899999999999999999999999999
Q ss_pred EEEechhhHH-HHhhhc-hHHHHHHHHHH----HhcCCeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhhhcCccC
Q 005003 319 FSISGSEFVE-MFVGVG-ASRVRDLFKKA----KENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEG 392 (720)
Q Consensus 319 ~~vs~s~~~~-~~~G~~-~~~vr~lF~~A----~~~~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~ldg~~~ 392 (720)
+.++++++.+ .|+|.- ...++++...+ +....+|+++||+|...+.........+.....+.+.||..+|+-..
T Consensus 97 ir~D~s~~~e~gyvg~dv~~~i~~l~~~~~~~v~~~~~~iv~lDEieK~~~~s~~~~~~~d~a~~~V~~~lLqild~~~~ 176 (364)
T d1um8a_ 97 AISDATSLTEAGYVGEDVENILTRLLQASDWNVQKAQKGIVFIDEIDKISRLSENRSITRDVSGEGVQQALLKIVEGSLV 176 (364)
T ss_dssp EEEEGGGCC--------CTHHHHHHHHHTTTCHHHHTTSEEEEETGGGC--------------CHHHHHHHHHHHHCCEE
T ss_pred eehhhhhcccchhhHhhhccchhhhhhhchhHHHHhhcccchhhhhhhhccccccccccccccchHHHHhhhhhhcCcee
Confidence 9999999986 355542 33456665543 34556899999999986543222222222344566777777764210
Q ss_pred -----------CCcEEEEEEeCC-------------------------------------------------CCccchhh
Q 005003 393 -----------NTGIIVIAATNR-------------------------------------------------ADILDSAL 412 (720)
Q Consensus 393 -----------~~~ViVIaaTN~-------------------------------------------------p~~LD~AL 412 (720)
..+.+++.++|- +..+.|.+
T Consensus 177 ~~~~~~gr~~~~~~~i~i~t~~i~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~PEf 256 (364)
T d1um8a_ 177 NIPPKGGRKHPEGNFIQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFTQEKMSKKEQEAILHLVQTHDLVTYGLIPEL 256 (364)
T ss_dssp C---------------CEECTTCEEEEEECCTTHHHHTTTSCSSCCCSCCCSSCCTTTTTTSGGGCCHHHHHHTTCCHHH
T ss_pred ccCCCCCCcCCcceeEEEeehhhhhhhcccchhhhhhhhhhcccccccccccccchhhhhhhhccccHHHHhhhhhHHHH
Confidence 123445544442 01245566
Q ss_pred cCCCcccceeeecCCCHHHHHHHHHH
Q 005003 413 LRPGRFDRQVTVDVPDIRGRTEILKV 438 (720)
Q Consensus 413 lrpgRFdr~I~i~~Pd~~eR~~IL~~ 438 (720)
+- ||+..+.+...+.++..+|+..
T Consensus 257 ~g--Ri~~iv~f~~L~~~~l~~Il~~ 280 (364)
T d1um8a_ 257 IG--RLPVLSTLDSISLEAMVDILQK 280 (364)
T ss_dssp HT--TCCEEEECCCCCHHHHHHHHHS
T ss_pred HH--HhcchhhHhhhhHHHHHHHHHH
Confidence 65 9999999999999999999864
No 30
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.33 E-value=1.3e-11 Score=121.67 Aligned_cols=157 Identities=18% Similarity=0.147 Sum_probs=105.8
Q ss_pred cCCceEEEEccCCChHHHHHHHHHHhcCCCEE--------EEechhhHHHH-------------hhhchHHHHHHHHHHH
Q 005003 288 RIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFF--------SISGSEFVEMF-------------VGVGASRVRDLFKKAK 346 (720)
Q Consensus 288 ~~prgVLL~GPPGTGKT~LArAlA~e~g~pf~--------~vs~s~~~~~~-------------~G~~~~~vr~lF~~A~ 346 (720)
++|.++||+||||+|||++|+++|+++.+.-. ..+|..+.... .......+|++.+.+.
T Consensus 22 ~l~h~lLl~Gp~G~GKtt~a~~~a~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~ir~l~~~~~ 101 (207)
T d1a5ta2 22 RGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLN 101 (207)
T ss_dssp CCCSEEEEECCTTSCHHHHHHHHHHHHTCSSCBTTBCCSCSHHHHHHHHTCCTTEEEECCCTTCSSBCHHHHHHHHHHTT
T ss_pred CcCeEEEEECCCCCcHHHHHHHHHHhcccccccccccccccchhhhhhhccccccchhhhhhcccccccchhhHHhhhhh
Confidence 45778999999999999999999997632100 00111111100 0112345666666553
Q ss_pred h----cCCeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhhhcCccCCCcEEEEEEeCCCCccchhhcCCCccccee
Q 005003 347 E----NAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQV 422 (720)
Q Consensus 347 ~----~~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~ldg~~~~~~ViVIaaTN~p~~LD~ALlrpgRFdr~I 422 (720)
. ....|++|||+|.+- ....+.||..|+. +..++++|.+||.++.+.+++++ |+ ..+
T Consensus 102 ~~~~~~~~kviIide~d~l~--------------~~a~n~Llk~lEe--p~~~~~fIl~t~~~~~ll~tI~S--Rc-~~i 162 (207)
T d1a5ta2 102 EHARLGGAKVVWVTDAALLT--------------DAAANALLKTLEE--PPAETWFFLATREPERLLATLRS--RC-RLH 162 (207)
T ss_dssp SCCTTSSCEEEEESCGGGBC--------------HHHHHHHHHHHTS--CCTTEEEEEEESCGGGSCHHHHT--TS-EEE
T ss_pred hccccCccceEEechhhhhh--------------hhhhHHHHHHHHh--hcccceeeeeecChhhhhhhhcc--ee-EEE
Confidence 2 335699999999992 3466788888874 35678999999999999999999 87 589
Q ss_pred eecCCCHHHHHHHHHHhhcCCCCcccccHHHHHHhCCCCcHHHHHH
Q 005003 423 TVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLAN 468 (720)
Q Consensus 423 ~i~~Pd~~eR~~IL~~~l~~~~l~~dvdl~~LA~~t~G~SgadL~~ 468 (720)
.|+.|+.++...+++.... . ++..+..+++.+.| ++++.-+
T Consensus 163 ~~~~~~~~~~~~~L~~~~~---~-~~~~~~~i~~~s~G-s~r~al~ 203 (207)
T d1a5ta2 163 YLAPPPEQYAVTWLSREVT---M-SQDALLAALRLSAG-SPGAALA 203 (207)
T ss_dssp ECCCCCHHHHHHHHHHHCC---C-CHHHHHHHHHHTTT-CHHHHHH
T ss_pred ecCCCCHHHHHHHHHHcCC---C-CHHHHHHHHHHcCC-CHHHHHH
Confidence 9999999998888875432 2 22336667776664 4554433
No 31
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=99.32 E-value=5.3e-12 Score=127.95 Aligned_cols=205 Identities=20% Similarity=0.299 Sum_probs=128.5
Q ss_pred ccccchHHHHHHHHHHHHhcCchhhhhccCcCCceEEEEccCCChHHHHHHHHHHhc---CCCEEEEechhhHHH-----
Q 005003 258 DVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEA---GVPFFSISGSEFVEM----- 329 (720)
Q Consensus 258 dI~G~de~k~eL~eiv~~l~~p~~~~~~g~~~prgVLL~GPPGTGKT~LArAlA~e~---g~pf~~vs~s~~~~~----- 329 (720)
+.+|.+++.+.+.+-+..+.... .+|||+||+|||||++|+++.... ..+++.++|..+...
T Consensus 1 ~~v~~S~~~~~~~~~~~~~a~~~----------~pvlI~Ge~GtGK~~~A~~ih~~s~~~~~~~~~~~~~~~~~~~~~~~ 70 (247)
T d1ny5a2 1 EYVFESPKMKEILEKIKKISCAE----------CPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAE 70 (247)
T ss_dssp CCCCCSHHHHHHHHHHHHHTTCC----------SCEEEECSTTSSHHHHHHHHHHHSTTTTSCEEEEETTTSCHHHHHHH
T ss_pred CeEecCHHHHHHHHHHHHHhCCC----------CCEEEECCCCcCHHHHHHHHHHhcCCcccccccchhhhhhhcccHHH
Confidence 46899999999888887754432 279999999999999999998754 568999999765432
Q ss_pred Hhhhc-------hHHHHHHHHHHHhcCCeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhhh-----cCc-cCCCcE
Q 005003 330 FVGVG-------ASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEM-----DGF-EGNTGI 396 (720)
Q Consensus 330 ~~G~~-------~~~vr~lF~~A~~~~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~l-----dg~-~~~~~V 396 (720)
..|.. ......+|+.|.. .+|||||||.+ +...+..+.+++..- ++. ....++
T Consensus 71 lfg~~~~~~~~~~~~~~g~l~~a~g---GtL~l~~i~~L-----------~~~~Q~~L~~~l~~~~~~~~~~~~~~~~~~ 136 (247)
T d1ny5a2 71 LFGYEKGAFTGAVSSKEGFFELADG---GTLFLDEIGEL-----------SLEAQAKLLRVIESGKFYRLGGRKEIEVNV 136 (247)
T ss_dssp HHCBCTTSSTTCCSCBCCHHHHTTT---SEEEEESGGGC-----------CHHHHHHHHHHHHHSEECCBTCCSBEECCC
T ss_pred hcCcccCCcCCcccccCCHHHccCC---CEEEEeChHhC-----------CHHHHHHHHHHHHhCCEEECCCCCceecCe
Confidence 12210 0011234555533 58999999999 344455555555421 111 112257
Q ss_pred EEEEEeCCCCccchhhcCCCcccc-------eeeecCCCHHHHHHHH----HHhhcC----CCCc----ccccHHHHHHh
Q 005003 397 IVIAATNRADILDSALLRPGRFDR-------QVTVDVPDIRGRTEIL----KVHGSN----KKFD----ADVSLDVIAMR 457 (720)
Q Consensus 397 iVIaaTN~p~~LD~ALlrpgRFdr-------~I~i~~Pd~~eR~~IL----~~~l~~----~~l~----~dvdl~~LA~~ 457 (720)
.+|++|+.+- ..+...|+|+. .+.+..|+..+|.+-+ +.++.. .... ....+..|...
T Consensus 137 RlI~~s~~~l---~~l~~~~~f~~~L~~~l~~~~i~lPpLreR~~Di~~l~~~~l~~~~~~~~~~~~~ls~~al~~L~~~ 213 (247)
T d1ny5a2 137 RILAATNRNI---KELVKEGKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLSY 213 (247)
T ss_dssp EEEEEESSCH---HHHHHTTSSCHHHHHHHTTEEEECCCGGGCHHHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHS
T ss_pred EEEEecCCCH---HHHHHcCCCcHHHHhhcCeeeecCCChhhchhhHhhhhhhhhhhhhhhcCCCCCCCCHHHHHHHHhC
Confidence 7888888631 12233334432 5678889998886433 333322 1111 11225556665
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHhCCCccCHHHHHH
Q 005003 458 TPGFSGADLANLLNEAAILAGRRGKAAISSKEIDD 492 (720)
Q Consensus 458 t~G~SgadL~~lv~eAa~~A~r~~~~~It~~dl~~ 492 (720)
.+--+-++|+++++.|+..+ ....|+.+|+..
T Consensus 214 ~WPGNl~EL~~~l~~a~~~~---~~~~I~~~dl~~ 245 (247)
T d1ny5a2 214 PWYGNVRELKNVIERAVLFS---EGKFIDRGELSC 245 (247)
T ss_dssp CCTTHHHHHHHHHHHHHHHC---CSSEECHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhC---CCCeECHHHccc
Confidence 55557789999999998655 456899999865
No 32
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=99.22 E-value=4.7e-14 Score=142.22 Aligned_cols=68 Identities=29% Similarity=0.392 Sum_probs=54.5
Q ss_pred CCccccccchHHHHHHHHHHHHhcCchhhhhccCcCCceEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHHH
Q 005003 254 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM 329 (720)
Q Consensus 254 ~~f~dI~G~de~k~eL~eiv~~l~~p~~~~~~g~~~prgVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~~ 329 (720)
++|+|..+.+...+.+.++....+ +...|++|||+||||||||++|+++|++++.+|+.++++++.+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~P~~ilL~GpPGtGKT~la~~la~~~~~~~~~i~~d~~~~~ 71 (273)
T d1gvnb_ 4 VNFTDKQFENRLNDNLEELIQGKK--------AVESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQQ 71 (273)
T ss_dssp TCCCHHHHHHHHHHHHHHHHTTCC--------CCSSCEEEEEECCTTSCTHHHHHHHHHHTTTCCEEECTHHHHTT
T ss_pred cccChHHHHHHHHHHHHHHHhccc--------CCCCCEEEEEECCCCCCHHHHHHHHHHHhhcceEEEecHHHHHH
Confidence 567776666666666655544332 45679999999999999999999999999999999999988653
No 33
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.22 E-value=1.5e-12 Score=142.57 Aligned_cols=150 Identities=25% Similarity=0.402 Sum_probs=71.5
Q ss_pred ccccchHHHHHHHHHHHH----hcCchhhhhccCcCCceEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHHH-Hhh
Q 005003 258 DVAGVDEAKQDFMEVVEF----LKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM-FVG 332 (720)
Q Consensus 258 dI~G~de~k~eL~eiv~~----l~~p~~~~~~g~~~prgVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~~-~~G 332 (720)
-|+|++++|+.+.-.+.. ++.+.... .--.|++|||.||+|||||+|||.||+.+++||+.++|+.|.+. |+|
T Consensus 15 yVvGQ~~AKk~lsvav~nhyrR~~~~~~~~--~ei~ksNILliGPTGvGKTlLAr~LAk~l~VPFv~~daT~fTeaGYvG 92 (443)
T d1g41a_ 15 HIIGQADAKRAVAIALRNRWRRMQLQEPLR--HEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVG 92 (443)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHHHHSCTTTT--TTCCCCCEEEECCTTSSHHHHHHHHHHHTTCCEEEEEGGGGC----CC
T ss_pred cccCcHHHHHHHHHHHHHHHHHhhcccccc--cccccccEEEECCCCCCHHHHHHHHHHHhCCCEEEeecceeeecceee
Confidence 489999999998877742 22222111 12347899999999999999999999999999999999999873 555
Q ss_pred hchHHHHHHHHHHHhcCCeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhhhcCccCCCcEEEEEEeCCCCccchhh
Q 005003 333 VGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSAL 412 (720)
Q Consensus 333 ~~~~~vr~lF~~A~~~~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~ldg~~~~~~ViVIaaTN~p~~LD~AL 412 (720)
. .+..++..+...+++.+..+|.+.+... ......+.+++.++...++........-+..+++...+ ..
T Consensus 93 ~---DVesii~~L~~~a~~~v~~~e~~~V~~~------~~~~~~e~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 161 (443)
T d1g41a_ 93 K---EVDSIIRDLTDSAMKLVRQQEIAKNRAR------AEDVAEERILDALLPPAKNQWGEVENHDSHSSTRQAFR--KK 161 (443)
T ss_dssp C---CTHHHHHHHHHHHHHHHHHHHHHSCC--------------------------------------------------
T ss_pred c---chhHHHHHHHHHHhhhHHHHHHHHHHHH------HHHHHHHHHHHHhcccccccccccccccchhhhhHHHH--HH
Confidence 4 3344444444444566778888777422 12233445677777766665555555666666665543 36
Q ss_pred cCCCcccc
Q 005003 413 LRPGRFDR 420 (720)
Q Consensus 413 lrpgRFdr 420 (720)
+++|+++.
T Consensus 162 L~~G~~~~ 169 (443)
T d1g41a_ 162 LREGQLDD 169 (443)
T ss_dssp --------
T ss_pred HhcCCccc
Confidence 77888875
No 34
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=98.88 E-value=8.1e-09 Score=100.71 Aligned_cols=115 Identities=16% Similarity=0.192 Sum_probs=86.6
Q ss_pred CceEEEEccCCChHHHHHHHHHHhcC------CCEEEEechhhHHHHhhhchHHHHHHHHHHHhc----CCeEEEEccch
Q 005003 290 PKGVLLVGPPGTGKTLLAKAIAGEAG------VPFFSISGSEFVEMFVGVGASRVRDLFKKAKEN----APCIVFVDEID 359 (720)
Q Consensus 290 prgVLL~GPPGTGKT~LArAlA~e~g------~pf~~vs~s~~~~~~~G~~~~~vr~lF~~A~~~----~P~ILfIDEID 359 (720)
+.++||+||||+|||++|+.+++... -.|+.+..+.- ..+-..+|++.+.+... ..-|++|||+|
T Consensus 15 ~~~~l~~G~~g~gk~~~a~~l~~~i~~~~~~h~D~~~i~~~~~-----~I~Id~IR~i~~~~~~~~~~~~~KviIId~ad 89 (198)
T d2gnoa2 15 GISILINGEDLSYPREVSLELPEYVEKFPPKASDVLEIDPEGE-----NIGIDDIRTIKDFLNYSPELYTRKYVIVHDCE 89 (198)
T ss_dssp SEEEEEECSSSSHHHHHHHHHHHHHHTSCCCTTTEEEECCSSS-----CBCHHHHHHHHHHHTSCCSSSSSEEEEETTGG
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHhccccCCCCEEEEeCCcC-----CCCHHHHHHHHHHHhhCcccCCCEEEEEeCcc
Confidence 44899999999999999999998663 23777765320 12446688887777432 23599999999
Q ss_pred hcccccCCCCCCCChHHHHHHHHHHhhhcCccCCCcEEEEEEeCCCCccchhhcCCCcccceeeecCCC
Q 005003 360 AVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPD 428 (720)
Q Consensus 360 ~l~~~r~~~~~~~~~e~~~~ln~LL~~ldg~~~~~~ViVIaaTN~p~~LD~ALlrpgRFdr~I~i~~Pd 428 (720)
.+- ....|.||..|+. ++.++++|.+||.++.+.|.+++ |+ ..+.++.|.
T Consensus 90 ~l~--------------~~aqNaLLK~LEE--Pp~~t~fiLit~~~~~ll~TI~S--RC-~~i~~~~p~ 139 (198)
T d2gnoa2 90 RMT--------------QQAANAFLKALEE--PPEYAVIVLNTRRWHYLLPTIKS--RV-FRVVVNVPK 139 (198)
T ss_dssp GBC--------------HHHHHHTHHHHHS--CCTTEEEEEEESCGGGSCHHHHT--TS-EEEECCCCH
T ss_pred ccc--------------hhhhhHHHHHHhC--CCCCceeeeccCChhhCHHHHhc--ce-EEEeCCCch
Confidence 992 3466888888884 45678889999999999999999 76 367777664
No 35
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=98.81 E-value=9.6e-08 Score=94.40 Aligned_cols=192 Identities=16% Similarity=0.135 Sum_probs=115.3
Q ss_pred CCCCCccccccchHHHHHHHHHHHHhcCchhhhhccCcCCceEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHHH-
Q 005003 251 NTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM- 329 (720)
Q Consensus 251 ~~~~~f~dI~G~de~k~eL~eiv~~l~~p~~~~~~g~~~prgVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~~- 329 (720)
.|...-++++|.++..+++.+. ..+.++|+||+|+|||+|++.++.+.+.++.++++..+...
T Consensus 6 ~p~~~~~~f~GR~~el~~l~~~----------------~~~~i~i~G~~G~GKTsLl~~~~~~~~~~~~~i~~~~~~~~~ 69 (283)
T d2fnaa2 6 SPKDNRKDFFDREKEIEKLKGL----------------RAPITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKFEERN 69 (283)
T ss_dssp SCCCSGGGSCCCHHHHHHHHHT----------------CSSEEEEEESTTSSHHHHHHHHHHHHTCCEEEEEGGGGTTCS
T ss_pred CCCCChhhCCChHHHHHHHHhc----------------cCCEEEEEcCCCCcHHHHHHHHHHHCCCCeEEEEeccccccc
Confidence 3444679999999888776531 12479999999999999999999999999988876543210
Q ss_pred ----------Hhh-----------------------------------hchHHHHHHHHHHH--hcCCeEEEEccchhcc
Q 005003 330 ----------FVG-----------------------------------VGASRVRDLFKKAK--ENAPCIVFVDEIDAVG 362 (720)
Q Consensus 330 ----------~~G-----------------------------------~~~~~vr~lF~~A~--~~~P~ILfIDEID~l~ 362 (720)
+.. .....+.++++... ...++++++||++.+.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~id~~~~~~ 149 (283)
T d2fnaa2 70 YISYKDFLLELQKEINKLVKRLPSLLKALKNIQGIVIMGNEIKFNWNRKDRLSFANLLESFEQASKDNVIIVLDEAQELV 149 (283)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHCTTHHHHTTTSTTEEECSSSEEEC-----CCCHHHHHHHHHHTCSSCEEEEEETGGGGG
T ss_pred cccHHHHHHHHHHHhhhhhhhhHHHHHHHHhhhcccccccccccccchhhhhHHHHHHHHHHhhcccccccccchhhhhc
Confidence 000 00111233444332 3567899999999985
Q ss_pred cccCCCCCCCChHHHHHHHHHHhhhcCccCCCcEEEEEEeCCCCcc-------chhhcCCCcccceeeecCCCHHHHHHH
Q 005003 363 RQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADIL-------DSALLRPGRFDRQVTVDVPDIRGRTEI 435 (720)
Q Consensus 363 ~~r~~~~~~~~~e~~~~ln~LL~~ldg~~~~~~ViVIaaTN~p~~L-------D~ALlrpgRFdr~I~i~~Pd~~eR~~I 435 (720)
.... ......+..+... ...+..+.++.....+ +..-.-.+|+...+.++..+.++..++
T Consensus 150 ~~~~-------~~~~~~l~~~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~l~~~e~~~~ 216 (283)
T d2fnaa2 150 KLRG-------VNLLPALAYAYDN------LKRIKFIMSGSEMGLLYDYLRVEDPESPLFGRAFSTVELKPFSREEAIEF 216 (283)
T ss_dssp GCTT-------CCCHHHHHHHHHH------CTTEEEEEEESSHHHHHHHTTTTCTTSTTTTCCCEEEEECCCCHHHHHHH
T ss_pred ccch-------HHHHHHHHHHHHh------hhhhhhhhccccchHHHHHHHhhhhcchhcccceeEEeeCCCCHHHHHHH
Confidence 4321 1122222222221 2334444443322111 110011235566889999999999999
Q ss_pred HHHhhcCCCCcccccHHHHHHhCCCCcHHHHHHHHHHH
Q 005003 436 LKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEA 473 (720)
Q Consensus 436 L~~~l~~~~l~~dvdl~~LA~~t~G~SgadL~~lv~eA 473 (720)
+...+....+..+ +.+.+.+.+.|. +.-|..+++.+
T Consensus 217 l~~~~~~~~~~~~-~~~~i~~~~~G~-P~~L~~~~~~~ 252 (283)
T d2fnaa2 217 LRRGFQEADIDFK-DYEVVYEKIGGI-PGWLTYFGFIY 252 (283)
T ss_dssp HHHHHHHHTCCCC-CHHHHHHHHCSC-HHHHHHHHHHH
T ss_pred HHhhhhhcCCCHH-HHHHHHHHhCCC-HHHHHHHHHHH
Confidence 9887765554433 367788888775 66666655433
No 36
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=98.38 E-value=1e-06 Score=82.01 Aligned_cols=24 Identities=42% Similarity=0.754 Sum_probs=22.0
Q ss_pred EEEEccCCChHHHHHHHHHHhcCC
Q 005003 293 VLLVGPPGTGKTLLAKAIAGEAGV 316 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e~g~ 316 (720)
|+|.||||+|||||++++++.+..
T Consensus 3 i~I~G~~G~GKSTLl~~i~~~l~~ 26 (178)
T d1ye8a1 3 IIITGEPGVGKTTLVKKIVERLGK 26 (178)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHGG
T ss_pred EEEECCCCcHHHHHHHHHHhcCCC
Confidence 899999999999999999997654
No 37
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=98.00 E-value=3.6e-06 Score=75.87 Aligned_cols=30 Identities=30% Similarity=0.769 Sum_probs=27.9
Q ss_pred ceEEEEccCCChHHHHHHHHHHhcCCCEEE
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFS 320 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~e~g~pf~~ 320 (720)
|.|+|.|||||||||+|+.||.++++||+.
T Consensus 3 k~I~l~G~~GsGKSTvak~La~~L~~~~id 32 (169)
T d1kaga_ 3 RNIFLVGPMGAGKSTIGRQLAQQLNMEFYD 32 (169)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEECCCCCCHHHHHHHHHHHhCCCeEe
Confidence 479999999999999999999999999874
No 38
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=97.92 E-value=6.9e-05 Score=75.58 Aligned_cols=168 Identities=12% Similarity=0.145 Sum_probs=93.0
Q ss_pred ccccchHHHHHHHHHHHHhcCchhhhhccCcCCceEEEEccCCChHHHHHHHHHHhcC----CC---EEEEechh-----
Q 005003 258 DVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAG----VP---FFSISGSE----- 325 (720)
Q Consensus 258 dI~G~de~k~eL~eiv~~l~~p~~~~~~g~~~prgVLL~GPPGTGKT~LArAlA~e~g----~p---f~~vs~s~----- 325 (720)
++.|.+..++++.+.+....+.+ .+-|.|||+.|+|||+||+.++++.. .. .+.++.+.
T Consensus 21 ~~~gR~~~~~~i~~~L~~~~~~~---------~~~v~I~GmgGiGKTtLA~~v~~~~~~~~~~~f~~~~Wv~vs~~~~~~ 91 (277)
T d2a5yb3 21 TCYIREYHVDRVIKKLDEMCDLD---------SFFLFLHGRAGSGKSVIASQALSKSDQLIGINYDSIVWLKDSGTAPKS 91 (277)
T ss_dssp CSCCCHHHHHHHHHHHHHHTTSS---------SEEEEEECSTTSSHHHHHHHHHHHCSSTBTTTBSEEEEEECCCCSTTH
T ss_pred ceeCcHHHHHHHHHHHHhccCCC---------ceEEEEECCCCCCHHHHHHHHHHhhhhhhhhcCceEEEEEecCCCCHH
Confidence 46788988888877776544432 23578999999999999999987632 11 22232211
Q ss_pred -hHHH---Hh---h------------hchHHHH-HHHHHHHhcCCeEEEEccchhcccccCCCCCCCChHHHHHHHHHHh
Q 005003 326 -FVEM---FV---G------------VGASRVR-DLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLT 385 (720)
Q Consensus 326 -~~~~---~~---G------------~~~~~vr-~lF~~A~~~~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~ 385 (720)
+... .. + ......+ ......-...++++++|+++... .+..+..
T Consensus 92 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~kr~LlVLDDv~~~~----------------~~~~~~~ 155 (277)
T d2a5yb3 92 TFDLFTDILLMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFDDVVQEE----------------TIRWAQE 155 (277)
T ss_dssp HHHHHHHHHHHHTTTSCCTTCCCCTTCCHHHHHHHHHHHHTTSTTEEEEEEEECCHH----------------HHHHHHH
T ss_pred HHHHHHHHHHHHhcchhhcCCccchhhhhHHHHHHHHHHHhccCCeeEecchhhHHh----------------hhhhhcc
Confidence 1100 00 0 0111111 22333335678999999986531 1111111
Q ss_pred hhcCccCCCcEEEEEEeCCCCccchhhcCCCcccceeeecCCCHHHHHHHHHHhhcCCCCccc-cc-HHHHHHhCCCCc
Q 005003 386 EMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDAD-VS-LDVIAMRTPGFS 462 (720)
Q Consensus 386 ~ldg~~~~~~ViVIaaTN~p~~LD~ALlrpgRFdr~I~i~~Pd~~eR~~IL~~~l~~~~l~~d-vd-l~~LA~~t~G~S 462 (720)
.+..+|.||...+... .+.. +. ..+.++..+.++-.++|..+......... .+ ...+++.+.|..
T Consensus 156 --------~~srilvTTR~~~v~~-~~~~--~~-~~~~l~~L~~~ea~~Lf~~~~~~~~~~~~~~~~~~~iv~~c~GlP 222 (277)
T d2a5yb3 156 --------LRLRCLVTTRDVEISN-AASQ--TC-EFIEVTSLEIDECYDFLEAYGMPMPVGEKEEDVLNKTIELSSGNP 222 (277)
T ss_dssp --------TTCEEEEEESBGGGGG-GCCS--CE-EEEECCCCCHHHHHHHHHHTSCCCC--CHHHHHHHHHHHHHTTCH
T ss_pred --------cCceEEEEeehHHHHH-hcCC--CC-ceEECCCCCHHHHHHHHHHHhCCccCchhhHHHHHHHHHHhCCCH
Confidence 1235666666543322 2222 11 35678889999999999887544332211 11 356777787764
No 39
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=97.91 E-value=2.7e-06 Score=78.35 Aligned_cols=39 Identities=28% Similarity=0.332 Sum_probs=34.2
Q ss_pred CceEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHH
Q 005003 290 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVE 328 (720)
Q Consensus 290 prgVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~ 328 (720)
+|.|+|.|||||||||||++||..++.|++......+..
T Consensus 7 ~K~I~i~G~~GsGKTTla~~La~~~~~~~i~~~~~~~~~ 45 (192)
T d1lw7a2 7 AKTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVF 45 (192)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHTTCEEECCTTHHHHH
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHhCCCeEeeehHHHhh
Confidence 678999999999999999999999999998776665544
No 40
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=97.80 E-value=5.8e-06 Score=76.11 Aligned_cols=38 Identities=34% Similarity=0.574 Sum_probs=34.1
Q ss_pred ceEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHH
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVE 328 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~ 328 (720)
+-|+|.|||||||||+|+++|++++.|++.++...+..
T Consensus 5 ~iI~l~G~~GsGKSTia~~La~~lg~~~~~~~~d~~~~ 42 (176)
T d1zp6a1 5 NILLLSGHPGSGKSTIAEALANLPGVPKVHFHSDDLWG 42 (176)
T ss_dssp EEEEEEECTTSCHHHHHHHHHTCSSSCEEEECTTHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCCEEEecHHHHHH
Confidence 45899999999999999999999999999998876654
No 41
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=97.80 E-value=1.5e-05 Score=73.91 Aligned_cols=31 Identities=32% Similarity=0.613 Sum_probs=28.7
Q ss_pred ceEEEEccCCChHHHHHHHHHHhcCCCEEEE
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSI 321 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~e~g~pf~~v 321 (720)
|+|+|.|+||+|||++++++|..+|+||+..
T Consensus 1 k~I~liG~~GsGKsTi~k~La~~l~~~~~d~ 31 (161)
T d1viaa_ 1 KNIVFIGFMGSGKSTLARALAKDLDLVFLDS 31 (161)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHHTCEEEEH
T ss_pred CcEEEECCCCCCHHHHHHHHHHHhCCCEEec
Confidence 4689999999999999999999999999864
No 42
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=97.68 E-value=1.6e-05 Score=72.72 Aligned_cols=39 Identities=15% Similarity=0.382 Sum_probs=33.9
Q ss_pred CceEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHH
Q 005003 290 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVE 328 (720)
Q Consensus 290 prgVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~ 328 (720)
++-|+|+||||+||||+|++||++++.+++.++...+..
T Consensus 3 ~kiI~l~G~~GsGKsTva~~L~~~l~~~~~~~~~d~~~~ 41 (178)
T d1qhxa_ 3 TRMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGVDSLIE 41 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHSSSCEEEEEHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHcCCCeEEeecchhhc
Confidence 356999999999999999999999999999888765543
No 43
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=97.66 E-value=2.4e-05 Score=72.70 Aligned_cols=37 Identities=24% Similarity=0.515 Sum_probs=30.9
Q ss_pred CceEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHH
Q 005003 290 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVE 328 (720)
Q Consensus 290 prgVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~ 328 (720)
.+.|+|.|+||+||||+|+.+|..+|+||+. ..++.+
T Consensus 2 ~~~Iil~G~~GsGKSTia~~LA~~Lg~~~id--~D~~ie 38 (170)
T d1e6ca_ 2 TEPIFMVGARGCGMTTVGRELARALGYEFVD--TDIFMQ 38 (170)
T ss_dssp CCCEEEESCTTSSHHHHHHHHHHHHTCEEEE--HHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHhCCCEEe--hhhhhh
Confidence 3578999999999999999999999999874 344443
No 44
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=97.62 E-value=9.9e-06 Score=74.13 Aligned_cols=29 Identities=41% Similarity=0.848 Sum_probs=26.9
Q ss_pred eEEEEccCCChHHHHHHHHHHhcCCCEEE
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEAGVPFFS 320 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~g~pf~~ 320 (720)
.|+|.|||||||||+|+.||..++.+++.
T Consensus 6 ~I~i~G~pGsGKTTia~~La~~l~~~~i~ 34 (173)
T d1rkba_ 6 NILLTGTPGVGKTTLGKELASKSGLKYIN 34 (173)
T ss_dssp CEEEECSTTSSHHHHHHHHHHHHCCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCcEEe
Confidence 38899999999999999999999999875
No 45
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.59 E-value=3.4e-05 Score=71.32 Aligned_cols=31 Identities=39% Similarity=0.760 Sum_probs=27.2
Q ss_pred CceEEEEccCCChHHHHHHHHHHhcCCCEEEE
Q 005003 290 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSI 321 (720)
Q Consensus 290 prgVLL~GPPGTGKT~LArAlA~e~g~pf~~v 321 (720)
|+ |+|.|+||+||||+++.+|..++.||+..
T Consensus 2 p~-IvliG~~G~GKSTig~~La~~l~~~fiD~ 32 (165)
T d2iyva1 2 PK-AVLVGLPGSGKSTIGRRLAKALGVGLLDT 32 (165)
T ss_dssp CS-EEEECSTTSSHHHHHHHHHHHHTCCEEEH
T ss_pred Cc-EEEECCCCCCHHHHHHHHHHHhCCCeEee
Confidence 55 66779999999999999999999998743
No 46
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=97.53 E-value=0.00011 Score=71.31 Aligned_cols=76 Identities=18% Similarity=0.183 Sum_probs=50.8
Q ss_pred CcCCceEEEEccCCChHHHHHHHHHHhc---CCCEEEEechhhHHHHh----------------------------hhch
Q 005003 287 ARIPKGVLLVGPPGTGKTLLAKAIAGEA---GVPFFSISGSEFVEMFV----------------------------GVGA 335 (720)
Q Consensus 287 ~~~prgVLL~GPPGTGKT~LArAlA~e~---g~pf~~vs~s~~~~~~~----------------------------G~~~ 335 (720)
++...-++|+||||+|||+++..+|..+ +.++.+++..+-...+. ....
T Consensus 23 i~~gsl~li~G~pGsGKT~l~~qia~~~~~~~~~~~~is~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (242)
T d1tf7a2 23 FFKDSIILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMERQNLLKIVCAYPESAGLE 102 (242)
T ss_dssp EESSCEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEESSSCHHHHHHHHHTTSCCHHHHHHTTSEEECCCCGGGSCHH
T ss_pred CcCCeEEEEEeCCCCCHHHHHHHHHHHHHHhccccceeeccCCHHHHHHHHHHcCCChHHHhhcCceEEEEeecchhhHH
Confidence 4445569999999999999999998765 66777776532211100 0011
Q ss_pred HHHHHHHHHHHhcCCeEEEEccchhcc
Q 005003 336 SRVRDLFKKAKENAPCIVFVDEIDAVG 362 (720)
Q Consensus 336 ~~vr~lF~~A~~~~P~ILfIDEID~l~ 362 (720)
..+..+........|.+++||.++.+.
T Consensus 103 ~~~~~i~~~i~~~~~~~vviDs~~~~~ 129 (242)
T d1tf7a2 103 DHLQIIKSEINDFKPARIAIDSLSALA 129 (242)
T ss_dssp HHHHHHHHHHHTTCCSEEEEECHHHHT
T ss_pred HHHHHHHHHHHhcCCceeeeecchhhh
Confidence 223344445567789999999999985
No 47
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.39 E-value=4.5e-05 Score=69.78 Aligned_cols=24 Identities=42% Similarity=0.693 Sum_probs=22.4
Q ss_pred ceEEEEccCCChHHHHHHHHHHhc
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAGEA 314 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~e~ 314 (720)
|+|+|+||||||||+|+++++..+
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~l 25 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEVL 25 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHH
T ss_pred cEEEEECCCCCcHHHHHHHHHHHH
Confidence 589999999999999999999876
No 48
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=97.38 E-value=3.9e-05 Score=70.17 Aligned_cols=32 Identities=25% Similarity=0.393 Sum_probs=28.2
Q ss_pred CceEEEEccCCChHHHHHHHHHHhcCCCEEEE
Q 005003 290 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSI 321 (720)
Q Consensus 290 prgVLL~GPPGTGKT~LArAlA~e~g~pf~~v 321 (720)
++-++|+|||||||||+|++||+.++.+++..
T Consensus 6 ~~iivl~G~~GsGKsT~a~~La~~l~~~~~~~ 37 (171)
T d1knqa_ 6 HHIYVLMGVSGSGKSAVASEVAHQLHAAFLDG 37 (171)
T ss_dssp SEEEEEECSTTSCHHHHHHHHHHHHTCEEEEG
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHhCCCeech
Confidence 45688999999999999999999999877654
No 49
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=97.36 E-value=4.4e-05 Score=69.32 Aligned_cols=35 Identities=29% Similarity=0.507 Sum_probs=28.4
Q ss_pred ceEEEEccCCChHHHHHHHHHHhcCCCEEEEechhh
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEF 326 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~ 326 (720)
+-|+|+||||+||||+|+.||.+.+.+++ ++...+
T Consensus 3 klI~i~G~~GsGKTTva~~L~~~~~~~~~-~~~d~~ 37 (176)
T d2bdta1 3 KLYIITGPAGVGKSTTCKRLAAQLDNSAY-IEGDII 37 (176)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHSSSEEE-EEHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHcCCCEE-EehHHH
Confidence 45899999999999999999999887654 444444
No 50
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=97.36 E-value=5.2e-05 Score=69.43 Aligned_cols=26 Identities=46% Similarity=0.687 Sum_probs=23.7
Q ss_pred ceEEEEccCCChHHHHHHHHHHhcCC
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAGEAGV 316 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~e~g~ 316 (720)
..|+|+||||+||||+|+.||..++.
T Consensus 6 ~~I~i~G~~GsGKTT~~~~La~~l~~ 31 (174)
T d1y63a_ 6 INILITGTPGTGKTSMAEMIAAELDG 31 (174)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHSTT
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHhCC
Confidence 34999999999999999999999865
No 51
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=97.34 E-value=9.8e-05 Score=69.47 Aligned_cols=39 Identities=23% Similarity=0.404 Sum_probs=31.8
Q ss_pred CceEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHHHH
Q 005003 290 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMF 330 (720)
Q Consensus 290 prgVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~~~ 330 (720)
|-.|+|.||||+||||+|+.||...|.++ ++.+++....
T Consensus 3 Pm~I~i~GppGsGKsT~a~~La~~~~~~~--is~~~~~~~~ 41 (189)
T d1zaka1 3 PLKVMISGAPASGKGTQCELIKTKYQLAH--ISAGDLLRAE 41 (189)
T ss_dssp SCCEEEEESTTSSHHHHHHHHHHHHCCEE--CCHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHCCcE--EehhHHHHHh
Confidence 44599999999999999999999998775 5666666544
No 52
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=97.19 E-value=7.9e-05 Score=70.10 Aligned_cols=34 Identities=29% Similarity=0.535 Sum_probs=27.8
Q ss_pred EEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHH
Q 005003 293 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVE 328 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~ 328 (720)
|+|.||||+||||+|+.||...|.++ ++..++..
T Consensus 6 iil~G~pGSGKsT~a~~La~~~g~~~--i~~gdllr 39 (190)
T d1ak2a1 6 AVLLGPPGAGKGTQAPKLAKNFCVCH--LATGDMLR 39 (190)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHTCEE--EEHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCeE--EeHHHHHH
Confidence 67889999999999999999998665 55555553
No 53
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=97.18 E-value=0.00011 Score=69.19 Aligned_cols=38 Identities=26% Similarity=0.493 Sum_probs=30.8
Q ss_pred cCCceEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhH
Q 005003 288 RIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFV 327 (720)
Q Consensus 288 ~~prgVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~ 327 (720)
..|+-|+|.||||+||||+|+.||...|.++ ++..++.
T Consensus 4 ~kp~iI~i~G~pGSGKsT~a~~La~~~g~~~--i~~g~~~ 41 (194)
T d1qf9a_ 4 SKPNVVFVLGGPGSGKGTQCANIVRDFGWVH--LSAGDLL 41 (194)
T ss_dssp CCCEEEEEEESTTSSHHHHHHHHHHHHCCEE--EEHHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHHHHCCce--EchhhHH
Confidence 3466799999999999999999999998754 4555554
No 54
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=97.17 E-value=0.00024 Score=67.02 Aligned_cols=39 Identities=26% Similarity=0.440 Sum_probs=31.7
Q ss_pred CceEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHHHH
Q 005003 290 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMF 330 (720)
Q Consensus 290 prgVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~~~ 330 (720)
|+-|+|.||||+||||+|+.||...|.++ ++.++++...
T Consensus 8 ~~iI~l~G~pGSGKsT~a~~La~~~g~~~--is~g~llr~~ 46 (194)
T d3adka_ 8 SKIIFVVGGPGSGKGTQCEKIVQKYGYTH--LSTGDLLRAE 46 (194)
T ss_dssp SCEEEEEECTTSSHHHHHHHHHHHTCCEE--EEHHHHHHHH
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHhCCee--EeccHHHHHH
Confidence 45699999999999999999999988655 5666666543
No 55
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=97.14 E-value=0.0002 Score=64.19 Aligned_cols=37 Identities=27% Similarity=0.582 Sum_probs=28.9
Q ss_pred ceEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHH
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVE 328 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~ 328 (720)
+-|+|+||||+||||+|+.++.+.. .+..++..++..
T Consensus 3 klIii~G~pGsGKTTla~~L~~~~~-~~~~~~~d~~~~ 39 (152)
T d1ly1a_ 3 KIILTIGCPGSGKSTWAREFIAKNP-GFYNINRDDYRQ 39 (152)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHST-TEEEECHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHhCC-CCEEechHHHHH
Confidence 4588999999999999999976643 466777766654
No 56
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=97.13 E-value=0.00055 Score=64.29 Aligned_cols=39 Identities=28% Similarity=0.520 Sum_probs=31.6
Q ss_pred CceEEEEccCCChHHHHHHHHHHhc---CCCEEEEechhhHH
Q 005003 290 PKGVLLVGPPGTGKTLLAKAIAGEA---GVPFFSISGSEFVE 328 (720)
Q Consensus 290 prgVLL~GPPGTGKT~LArAlA~e~---g~pf~~vs~s~~~~ 328 (720)
|-=|+++|.||+||||+|++||+.+ +.+...++...+..
T Consensus 2 p~li~l~GlpgsGKSTla~~L~~~l~~~~~~~~~~~~D~~r~ 43 (213)
T d1bifa1 2 PTLIVMVGLPARGKTYISKKLTRYLNFIGVPTREFNVGQYRR 43 (213)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHhcCCCCeEEcccceeh
Confidence 5568999999999999999999866 56677777766553
No 57
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.12 E-value=0.00031 Score=65.66 Aligned_cols=38 Identities=26% Similarity=0.378 Sum_probs=30.2
Q ss_pred cCCceEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhH
Q 005003 288 RIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFV 327 (720)
Q Consensus 288 ~~prgVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~ 327 (720)
+.|.-|+++|+||+||||+|+.++...+. ..++.+++.
T Consensus 12 ~~p~liil~G~pGsGKST~a~~l~~~~~~--~~i~~D~~~ 49 (172)
T d1yj5a2 12 PNPEVVVAVGFPGAGKSTFIQEHLVSAGY--VHVNRDTLG 49 (172)
T ss_dssp SSCCEEEEECCTTSSHHHHHHHHTGGGTC--EEEEHHHHC
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHhcCC--EEEchHHHH
Confidence 45677999999999999999999988775 445655543
No 58
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=97.10 E-value=0.00014 Score=67.33 Aligned_cols=35 Identities=31% Similarity=0.605 Sum_probs=29.3
Q ss_pred EEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHHH
Q 005003 293 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM 329 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~~ 329 (720)
|+|.||||+||||+|+.||...|.+++. ..++...
T Consensus 3 I~i~G~pGSGKsT~a~~La~~~~~~~i~--~~~ll~~ 37 (182)
T d1zina1 3 LVLMGLPGAGKGTQAEKIVAAYGIPHIS--TGDMFRA 37 (182)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHCCCEEE--HHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCceec--hhHHHHH
Confidence 8999999999999999999999887654 4555543
No 59
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=97.08 E-value=0.00096 Score=63.28 Aligned_cols=39 Identities=31% Similarity=0.366 Sum_probs=28.9
Q ss_pred cCcCCceEEEEccCCChHHHHHHHHHH----hcCCCEEEEech
Q 005003 286 GARIPKGVLLVGPPGTGKTLLAKAIAG----EAGVPFFSISGS 324 (720)
Q Consensus 286 g~~~prgVLL~GPPGTGKT~LArAlA~----e~g~pf~~vs~s 324 (720)
|+++..-++|+|+||+|||++|..+|. ..+.++++++..
T Consensus 22 Gi~~G~~~~I~G~~G~GKT~la~~~~~~~~~~~~~~~~~~s~e 64 (242)
T d1tf7a1 22 GLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFE 64 (242)
T ss_dssp SEETTSEEEEEESTTSSHHHHHHHHHHHHHHHHCCCEEEEESS
T ss_pred CCcCCeEEEEEeCCCCCHHHHHHHHHHHHHHhcCCCccccccc
Confidence 445556799999999999999977643 235677777654
No 60
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=97.05 E-value=0.0006 Score=68.33 Aligned_cols=117 Identities=19% Similarity=0.304 Sum_probs=63.1
Q ss_pred cCcCCceEEEEccCCChHHHHHHHHHHhc---CCCEEEEechhhHH-HH---hhhc-----------hHHHHHHHHH-HH
Q 005003 286 GARIPKGVLLVGPPGTGKTLLAKAIAGEA---GVPFFSISGSEFVE-MF---VGVG-----------ASRVRDLFKK-AK 346 (720)
Q Consensus 286 g~~~prgVLL~GPPGTGKT~LArAlA~e~---g~pf~~vs~s~~~~-~~---~G~~-----------~~~vr~lF~~-A~ 346 (720)
|++..+-+.|+||||+|||+++-.+|..+ |..+++++...-.+ .+ .|.. ....-++.+. .+
T Consensus 50 Gi~~g~itei~G~~gsGKTtl~l~~~~~~q~~g~~~vyidtE~~~~~~~a~~~Gvd~d~v~~~~~~~~E~~~~~i~~l~~ 129 (263)
T d1u94a1 50 GLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALAR 129 (263)
T ss_dssp SEETTSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHTTCCGGGCEEECCSSHHHHHHHHHHHHH
T ss_pred CccCceEEEEecCCCcHHHHHHHHHHHHHHcCCCEEEEEccccccCHHHHHHhCCCHHHEEEecCCCHHHHHHHHHHHHh
Confidence 44445568999999999999998887654 67778887643211 00 1211 1112222222 34
Q ss_pred hcCCeEEEEccchhccccc---CCCCCCCChHHHHHHHHHHhhhcCccCCCcEEEEEEe
Q 005003 347 ENAPCIVFVDEIDAVGRQR---GTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAAT 402 (720)
Q Consensus 347 ~~~P~ILfIDEID~l~~~r---~~~~~~~~~e~~~~ln~LL~~ldg~~~~~~ViVIaaT 402 (720)
...+++|+||-+.++.++. ............+.+..++..+-......++.+|.+.
T Consensus 130 ~~~~~liViDSi~al~~~~e~~~~~~~~~~~~~a~~l~~~~~~l~~~~~~~~~~vi~~N 188 (263)
T d1u94a1 130 SGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFIN 188 (263)
T ss_dssp HTCCSEEEEECGGGCCCHHHHTTC------CHHHHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred cCCCCEEEEECccccccchhcccccccchHHHHHHHHHHHHHHHHHhhhccCceEEEEE
Confidence 4678899999998886421 1100111112234455555544433333455566543
No 61
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=96.99 E-value=0.00033 Score=63.62 Aligned_cols=24 Identities=25% Similarity=0.394 Sum_probs=21.9
Q ss_pred eEEEEccCCChHHHHHHHHHHhcC
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEAG 315 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~g 315 (720)
-|+|+|+||+||||+|++||..++
T Consensus 8 ~I~l~G~~GsGKTTia~~La~~L~ 31 (183)
T d1m8pa3 8 TIFLTGYMNSGKDAIARALQVTLN 31 (183)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHh
Confidence 488999999999999999999874
No 62
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=96.98 E-value=0.001 Score=66.72 Aligned_cols=119 Identities=21% Similarity=0.270 Sum_probs=70.5
Q ss_pred cCcCCceEEEEccCCChHHHHHHHHHHhc---CCCEEEEechhhHH-HH---hhh-----------chHHHHHHHHHH-H
Q 005003 286 GARIPKGVLLVGPPGTGKTLLAKAIAGEA---GVPFFSISGSEFVE-MF---VGV-----------GASRVRDLFKKA-K 346 (720)
Q Consensus 286 g~~~prgVLL~GPPGTGKT~LArAlA~e~---g~pf~~vs~s~~~~-~~---~G~-----------~~~~vr~lF~~A-~ 346 (720)
|++..+-+.++||||||||++|..++..+ |..+++++...-.+ .+ .|. .....-++.+.. +
T Consensus 53 Gip~g~itei~G~~~sGKT~l~l~~~~~aqk~g~~v~yiDtE~~~~~~~a~~~Gvd~d~i~~~~~~~~E~~~~~~~~l~~ 132 (268)
T d1xp8a1 53 GIPRGRITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALDPVYARALGVNTDELLVSQPDNGEQALEIMELLVR 132 (268)
T ss_dssp SEETTSEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHTTCCGGGCEEECCSSHHHHHHHHHHHHT
T ss_pred CccCceEEEEecCCccchHHHHHHHHHHHHhCCCEEEEEECCccCCHHHHHHhCCCchhEEEEcCCCHHHHHHHHHHHHh
Confidence 44555678999999999999999986654 67788887653221 11 121 111122233332 3
Q ss_pred hcCCeEEEEccchhcccccCCCCC---CCChHHHHHHHHHHhhhcCccCCCcEEEEEEeCC
Q 005003 347 ENAPCIVFVDEIDAVGRQRGTGIG---GGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNR 404 (720)
Q Consensus 347 ~~~P~ILfIDEID~l~~~r~~~~~---~~~~e~~~~ln~LL~~ldg~~~~~~ViVIaaTN~ 404 (720)
...+++|+||=+.++.++.+.... .......+.+..++..+-......++.+|.+...
T Consensus 133 ~~~~~liIiDSi~al~~r~e~~~~~~~~~~~~~a~~l~~~lr~l~~~~~~~~~~vi~tNQv 193 (268)
T d1xp8a1 133 SGAIDVVVVDSVAALTPRAEIEGDMGDSLPGLQARLMSQALRKLTAILSKTGTAAIFINQV 193 (268)
T ss_dssp TTCCSEEEEECTTTCCCSTTC--------CCHHHHHHHHHHHHHHHHHTTTCCEEEEEEEC
T ss_pred cCCCcEEEEecccccccHHHHcccccchhHHHHHHHHHHHHHHHHhhhhhcCCeEEEEeEE
Confidence 456889999999998754332100 1111345566666666665555667777776543
No 63
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.96 E-value=0.00017 Score=67.23 Aligned_cols=35 Identities=43% Similarity=0.714 Sum_probs=28.9
Q ss_pred eEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHH
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVE 328 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~ 328 (720)
.|+|.||||+||||+|+.||...|.+++. .+++..
T Consensus 2 ~I~i~G~pGsGKsT~a~~La~~~g~~~i~--~~~l~~ 36 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVKLAEKLGIPQIS--TGELFR 36 (181)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCCEEE--HHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceEc--hHHHHH
Confidence 48899999999999999999999887664 445443
No 64
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=96.95 E-value=0.0015 Score=57.67 Aligned_cols=33 Identities=24% Similarity=0.311 Sum_probs=26.9
Q ss_pred eEEEEccCCChHHHHHHHHHHhcCCCEEEEech
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGS 324 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s 324 (720)
..+|.+|.|+|||+++-.++.+.+..++.+...
T Consensus 10 ~~ll~apTGsGKT~~~~~~~~~~~~~vli~~P~ 42 (136)
T d1a1va1 10 VAHLHAPTGSGKSTKVPAAYAAQGYKVLVLNPS 42 (136)
T ss_dssp EEEEECCTTSCTTTHHHHHHHTTTCCEEEEESC
T ss_pred EEEEEeCCCCCHHHHHHHHHHHcCCcEEEEcCh
Confidence 689999999999998877777777777766554
No 65
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.95 E-value=7.4e-05 Score=69.68 Aligned_cols=37 Identities=27% Similarity=0.438 Sum_probs=27.7
Q ss_pred CceEEEEccCCChHHHHHHHHHHhcCC---CEEEEechhh
Q 005003 290 PKGVLLVGPPGTGKTLLAKAIAGEAGV---PFFSISGSEF 326 (720)
Q Consensus 290 prgVLL~GPPGTGKT~LArAlA~e~g~---pf~~vs~s~~ 326 (720)
+.-|+|+|+||+||||+|++||..++. +...+....+
T Consensus 19 g~vI~L~G~pGSGKTTiAk~La~~l~~~~~~~~~~~~d~~ 58 (195)
T d1x6va3 19 GCTVWLTGLSGAGKTTVSMALEEYLVCHGIPCYTLDGDNI 58 (195)
T ss_dssp CEEEEEESSCHHHHHHHHHHHHHHHHHTTCCEEEECHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHhcCCCccchhHHhh
Confidence 345789999999999999999998854 4444444433
No 66
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=96.92 E-value=0.00025 Score=66.17 Aligned_cols=34 Identities=32% Similarity=0.602 Sum_probs=28.6
Q ss_pred EEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHH
Q 005003 293 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVE 328 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~ 328 (720)
|+|.||||+||||+|+.||.++|.+++. ..++..
T Consensus 3 I~i~G~pGSGKsT~a~~La~~~g~~~is--~gdllr 36 (182)
T d1s3ga1 3 IVLMGLPGAGKGTQADRIVEKYGTPHIS--TGDMFR 36 (182)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHCCCEEE--HHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCceee--HHHHHH
Confidence 7899999999999999999999988664 445543
No 67
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=96.91 E-value=0.00075 Score=65.43 Aligned_cols=39 Identities=31% Similarity=0.397 Sum_probs=24.9
Q ss_pred cCCceEEEEccCCChHHHHHHHHHHhc---CCCEEEEechhh
Q 005003 288 RIPKGVLLVGPPGTGKTLLAKAIAGEA---GVPFFSISGSEF 326 (720)
Q Consensus 288 ~~prgVLL~GPPGTGKT~LArAlA~e~---g~pf~~vs~s~~ 326 (720)
+.|.-++|.||+|+|||+.+--+|..+ +..+..+++..+
T Consensus 10 k~p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~ 51 (211)
T d1j8yf2 10 KIPYVIMLVGVQGTGKATTAGKLAYFYKKKGFKVGLVGADVY 51 (211)
T ss_dssp SSSEEEEEECSCCC----HHHHHHHHHHHTTCCEEEEECCCS
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEeecc
Confidence 467779999999999998877776643 556666665443
No 68
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=96.91 E-value=0.00094 Score=64.70 Aligned_cols=116 Identities=20% Similarity=0.298 Sum_probs=65.9
Q ss_pred CcCCceEEEEccCCChHHHHHHHHHHhc---CCCEEEEechhhHH-------HH---hh----------hchHHHHHHHH
Q 005003 287 ARIPKGVLLVGPPGTGKTLLAKAIAGEA---GVPFFSISGSEFVE-------MF---VG----------VGASRVRDLFK 343 (720)
Q Consensus 287 ~~~prgVLL~GPPGTGKT~LArAlA~e~---g~pf~~vs~s~~~~-------~~---~G----------~~~~~vr~lF~ 343 (720)
...|.-++|.||+|+||||.+--+|..+ |..+..+++..+.- .| .+ .....+++..+
T Consensus 6 ~~~p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~~~~~~~~d~~~~l~~~~~ 85 (211)
T d2qy9a2 6 GKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQ 85 (211)
T ss_dssp SCTTEEEEEECCTTSCHHHHHHHHHHHHHTTTCCEEEECCCTTCHHHHHHHHHHHHHTTCCEECCSTTCCHHHHHHHHHH
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEecccccccchhhhhhhhhhcCCcccccccCCCHHHHHHHHHH
Confidence 3457779999999999999887787543 67777777765532 11 11 11233445555
Q ss_pred HHHhcCCeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhhhcCc---cCCCcEEEEEEeCCCCccchh
Q 005003 344 KAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGF---EGNTGIIVIAATNRADILDSA 411 (720)
Q Consensus 344 ~A~~~~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~ldg~---~~~~~ViVIaaTN~p~~LD~A 411 (720)
.++...-.+|+||=....- .+...-+.+..+.+.+... .+...++|+.++...+.+..+
T Consensus 86 ~a~~~~~d~ilIDTaGr~~---------~d~~~~~el~~l~~~~~~~~~~~p~~~~LVl~a~~~~~~~~~~ 147 (211)
T d2qy9a2 86 AAKARNIDVLIADTAGRLQ---------NKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQA 147 (211)
T ss_dssp HHHHTTCSEEEECCCCCGG---------GHHHHHHHHHHHHHHHTTTCTTCCSEEEEEEEGGGTHHHHHHH
T ss_pred HHHHcCCCEEEeccCCCcc---------ccHHHHHHHHHHHHHHhhhcccCcceeeeehhcccCcchHHHH
Confidence 5665556788887653321 1222223333444443322 223446677777666655543
No 69
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.88 E-value=0.00027 Score=66.33 Aligned_cols=37 Identities=30% Similarity=0.521 Sum_probs=29.8
Q ss_pred CceEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHH
Q 005003 290 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVE 328 (720)
Q Consensus 290 prgVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~ 328 (720)
|.-|+|.||||+||||.|+.||+..|.+. ++..++..
T Consensus 1 p~iI~i~GppGSGKsT~a~~La~~~g~~~--i~~g~llR 37 (194)
T d1teva_ 1 PLVVFVLGGPGAGKGTQCARIVEKYGYTH--LSAGELLR 37 (194)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHCCEE--EEHHHHHH
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHhCCce--EcHHHHHH
Confidence 44589999999999999999999998654 55566543
No 70
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.86 E-value=0.00027 Score=66.61 Aligned_cols=34 Identities=18% Similarity=0.448 Sum_probs=28.3
Q ss_pred eEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhH
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFV 327 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~ 327 (720)
-|+|.||||+||||+|+.||...|.++ ++..+++
T Consensus 10 iI~i~GppGSGKsT~a~~La~~~g~~~--is~gdl~ 43 (196)
T d1ukza_ 10 VIFVLGGPGAGKGTQCEKLVKDYSFVH--LSAGDLL 43 (196)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHSSCEE--EEHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCeE--EehhHHH
Confidence 588899999999999999999998755 5555554
No 71
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=96.86 E-value=0.00026 Score=67.27 Aligned_cols=35 Identities=26% Similarity=0.404 Sum_probs=29.1
Q ss_pred eEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHH
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVE 328 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~ 328 (720)
-|.+.||||+||||+|+.||++.|.++ +|..++..
T Consensus 5 iI~I~GppGSGKgT~ak~La~~~gl~~--iStGdLlR 39 (225)
T d1ckea_ 5 VITIDGPSGAGKGTLCKAMAEALQWHL--LDSGAIYR 39 (225)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCEE--EEHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCcE--ECHHHHHH
Confidence 578889999999999999999998766 56666543
No 72
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=96.86 E-value=0.00025 Score=67.26 Aligned_cols=35 Identities=20% Similarity=0.470 Sum_probs=28.9
Q ss_pred eEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHH
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVE 328 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~ 328 (720)
-|+|.||||+||||+|+.||...|+++ ++..++..
T Consensus 8 rIiliG~PGSGKtT~a~~La~~~g~~~--is~gdllr 42 (189)
T d2ak3a1 8 RAAIMGAPGSGKGTVSSRITKHFELKH--LSSGDLLR 42 (189)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHBCCEE--EEHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHHCCeE--EcHHHHHH
Confidence 377889999999999999999998665 56666654
No 73
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.83 E-value=0.00029 Score=65.71 Aligned_cols=36 Identities=22% Similarity=0.491 Sum_probs=29.1
Q ss_pred eEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHHH
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM 329 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~~ 329 (720)
-|+|.||||+||||+|+.||.+.|.++ ++..++...
T Consensus 4 rIvl~G~pGSGKtT~a~~La~~~g~~~--i~~~d~~~~ 39 (180)
T d1akya1 4 RMVLIGPPGAGKGTQAPNLQERFHAAH--LATGDMLRS 39 (180)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHCCEE--EEHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCce--Eecccccee
Confidence 378889999999999999999998764 555565543
No 74
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=96.80 E-value=0.0017 Score=62.73 Aligned_cols=114 Identities=21% Similarity=0.229 Sum_probs=61.9
Q ss_pred CceEEEEccCCChHHHHHHHHHHhc---CCCEEEEechhhH-------HHH---hh------h----chHHHHHHHHHHH
Q 005003 290 PKGVLLVGPPGTGKTLLAKAIAGEA---GVPFFSISGSEFV-------EMF---VG------V----GASRVRDLFKKAK 346 (720)
Q Consensus 290 prgVLL~GPPGTGKT~LArAlA~e~---g~pf~~vs~s~~~-------~~~---~G------~----~~~~vr~lF~~A~ 346 (720)
|+-++|+||+|+|||+.+--+|..+ |..+..+++..+. ..| .+ . ....+++....++
T Consensus 6 ~~vi~lvGptGvGKTTTiaKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~i~~~~~~~~~d~~~~~~~~~~~~~ 85 (207)
T d1okkd2 6 GRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRLSIPVIQGPEGTDPAALAYDAVQAMK 85 (207)
T ss_dssp SSEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEECCCCSSTTHHHHHHHHHHHHTCCEECCCTTCCHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEeccccccchhhHhhcccccCceEEeccCCccHHHHHHHHHHHHH
Confidence 5678999999999998877777644 5666666654432 111 11 0 1122333333344
Q ss_pred hcCCeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhh---hcCccCCCcEEEEEEeCCCCccchhh
Q 005003 347 ENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTE---MDGFEGNTGIIVIAATNRADILDSAL 412 (720)
Q Consensus 347 ~~~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~---ldg~~~~~~ViVIaaTN~p~~LD~AL 412 (720)
...-.+|+||=.... ..+....+.+..+... .+...+...++|+.++...+.++...
T Consensus 86 ~~~~d~ilIDTaGr~---------~~d~~l~~el~~~~~~~~~~~~~~p~~~~LVl~a~~~~~~~~~~~ 145 (207)
T d1okkd2 86 ARGYDLLFVDTAGRL---------HTKHNLMEELKKVKRAIAKADPEEPKEVWLVLDAVTGQNGLEQAK 145 (207)
T ss_dssp HHTCSEEEECCCCCC---------TTCHHHHHHHHHHHHHHHHHCTTCCSEEEEEEETTBCTHHHHHHH
T ss_pred HCCCCEEEcCccccc---------hhhHHHHHHHHHHHHHhhhcccCCCceEEEEeecccCchHHHHHH
Confidence 444578887765332 1233333333333333 23333344577777777766655543
No 75
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=96.76 E-value=0.00039 Score=64.53 Aligned_cols=33 Identities=30% Similarity=0.563 Sum_probs=27.7
Q ss_pred EEEEccCCChHHHHHHHHHHhcCCCEEEEechhhH
Q 005003 293 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFV 327 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~ 327 (720)
|+|.||||+||||+|+.||...+.+++ ++.++.
T Consensus 3 I~i~G~pGSGKsT~~~~La~~~~~~~i--~~~~ll 35 (179)
T d1e4va1 3 IILLGAPVAGKGTQAQFIMEKYGIPQI--STGDML 35 (179)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHCCCEE--EHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCcee--chhhHh
Confidence 789999999999999999999987765 444444
No 76
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=96.73 E-value=0.00037 Score=66.55 Aligned_cols=33 Identities=27% Similarity=0.553 Sum_probs=27.2
Q ss_pred EEEEccCCChHHHHHHHHHHhcCCCEEEEechhhH
Q 005003 293 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFV 327 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~ 327 (720)
|.+.||||+||||+|+.||.++|.+++ |..++.
T Consensus 6 IaIdGp~GsGKgT~ak~La~~lg~~~i--stGdl~ 38 (223)
T d1q3ta_ 6 IAIDGPASSGKSTVAKIIAKDFGFTYL--DTGAMY 38 (223)
T ss_dssp EEEECSSCSSHHHHHHHHHHHHCCEEE--EHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCcEE--CHHHHH
Confidence 557799999999999999999998755 555544
No 77
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.66 E-value=0.0014 Score=65.76 Aligned_cols=116 Identities=22% Similarity=0.273 Sum_probs=67.8
Q ss_pred cCcCCceEEEEccCCChHHHHHHHHHHhc---CCCEEEEechhh-----HHHHhhhch--------HHHHHHHHHH----
Q 005003 286 GARIPKGVLLVGPPGTGKTLLAKAIAGEA---GVPFFSISGSEF-----VEMFVGVGA--------SRVRDLFKKA---- 345 (720)
Q Consensus 286 g~~~prgVLL~GPPGTGKT~LArAlA~e~---g~pf~~vs~s~~-----~~~~~G~~~--------~~vr~lF~~A---- 345 (720)
|++..+-+.|+||||+|||++|..++..+ |..+++++...- .+.+ |... ....+.++.+
T Consensus 56 G~~~g~i~e~~G~~~~GKT~l~l~~~~~~q~~g~~~vyIDtE~~~~~e~a~~~-GvD~d~il~~~~~~~E~~~~~~~~l~ 134 (269)
T d1mo6a1 56 GLPRGRVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKL-GVDTDSLLVSQPDTGEQALEIADMLI 134 (269)
T ss_dssp SBCSSSEEEEECSSSSSHHHHHHHHHHHHHHTTCEEEEEESSCCCCHHHHHHH-TCCGGGCEEECCSSHHHHHHHHHHHH
T ss_pred CcccceeEEEecCCCcHHHHHHHHHHHHHhcCCCEEEEEECCccCCHHHHHHh-CCCHHHeEEecCCCHHHHHHHHHHHH
Confidence 56666779999999999999997775544 777788876442 2211 2111 1122333322
Q ss_pred HhcCCeEEEEccchhcccccCC-C-C-CCCChHHHHHHHHHHhhhcCccCCCcEEEEEEe
Q 005003 346 KENAPCIVFVDEIDAVGRQRGT-G-I-GGGNDEREQTLNQLLTEMDGFEGNTGIIVIAAT 402 (720)
Q Consensus 346 ~~~~P~ILfIDEID~l~~~r~~-~-~-~~~~~e~~~~ln~LL~~ldg~~~~~~ViVIaaT 402 (720)
+...+++|+||-+.++.++..- + . ........+.+..++..+.......++.+|.+.
T Consensus 135 ~~~~~~liIiDSi~al~~~~E~e~~~~~~~~~~~a~~l~~~l~~l~~~~~~~~~~vi~~N 194 (269)
T d1mo6a1 135 RSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFIN 194 (269)
T ss_dssp HTTCEEEEEEECSTTCCCHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred hcCCCCEEEEecccccccHHHhccccccchHHHHHHHHHHHHHHHHHHHhhcCchhhhhh
Confidence 3466889999999998753221 1 0 111223445666666665544444567777764
No 78
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=96.51 E-value=0.0016 Score=62.79 Aligned_cols=37 Identities=27% Similarity=0.218 Sum_probs=27.5
Q ss_pred CceEEEEccCCChHHHHHHHHHHhc---CCCEEEEechhh
Q 005003 290 PKGVLLVGPPGTGKTLLAKAIAGEA---GVPFFSISGSEF 326 (720)
Q Consensus 290 prgVLL~GPPGTGKT~LArAlA~e~---g~pf~~vs~s~~ 326 (720)
++-++|.||+|+||||.+--+|..+ +..+..+++..+
T Consensus 10 ~~vi~lvGp~GvGKTTTiaKLA~~~~~~g~kV~lit~Dt~ 49 (207)
T d1ls1a2 10 RNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQ 49 (207)
T ss_dssp SEEEEEECCTTTTHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEecccc
Confidence 3447889999999999888787644 666777766544
No 79
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=96.51 E-value=0.0013 Score=69.55 Aligned_cols=99 Identities=19% Similarity=0.308 Sum_probs=63.3
Q ss_pred ccCCCCCccccccchHHHHHHHHHHHHhcCchhhhhccCcCCce-EEEEccCCChHHHHHHHHHHhcC---CCEEEEec-
Q 005003 249 EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKG-VLLVGPPGTGKTLLAKAIAGEAG---VPFFSISG- 323 (720)
Q Consensus 249 ~~~~~~~f~dI~G~de~k~eL~eiv~~l~~p~~~~~~g~~~prg-VLL~GPPGTGKT~LArAlA~e~g---~pf~~vs~- 323 (720)
...+..+++++.-.+...+.+++++. . |+| ||+.||.|+||||+..++-.+.+ ..++.+--
T Consensus 130 ~~~~~~~l~~LG~~~~~~~~l~~l~~---~-----------~~GliLvtGpTGSGKSTTl~~~l~~~~~~~~~i~tiEdP 195 (401)
T d1p9ra_ 130 KNATRLDLHSLGMTAHNHDNFRRLIK---R-----------PHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDP 195 (401)
T ss_dssp TTTTCCCGGGSCCCHHHHHHHHHHHT---S-----------SSEEEEEECSTTSCHHHHHHHHHHHHCCTTSCEEEEESS
T ss_pred ccccchhhhhhcccHHHHHHHHHHHh---h-----------hhceEEEEcCCCCCccHHHHHHhhhhcCCCceEEEeccC
Confidence 34445678898766666666665542 2 234 78899999999999999988763 34554421
Q ss_pred hhhHH------HHhhhchHHHHHHHHHHHhcCCeEEEEccchhc
Q 005003 324 SEFVE------MFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 361 (720)
Q Consensus 324 s~~~~------~~~G~~~~~vr~lF~~A~~~~P~ILfIDEID~l 361 (720)
-++.- ...+..........+.+.+..|.||+|.||...
T Consensus 196 iE~~~~~~~q~~v~~~~~~~~~~~l~~~lR~dPDvi~igEiRd~ 239 (401)
T d1p9ra_ 196 IEFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDL 239 (401)
T ss_dssp CCSCCSSSEEEECBGGGTBCHHHHHHHHGGGCCSEEEESCCCSH
T ss_pred cccccCCCCeeeecCCcCCCHHHHHHHHHhhcCCEEEecCcCCh
Confidence 11110 011112223566777788899999999999553
No 80
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=96.50 E-value=0.0011 Score=60.43 Aligned_cols=35 Identities=29% Similarity=0.397 Sum_probs=27.4
Q ss_pred ceEEEEccCCChHHHHHHHHHHhc---CCCEEEEechh
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAGEA---GVPFFSISGSE 325 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~e~---g~pf~~vs~s~ 325 (720)
|-|+|.||||+||||+++.|+..+ +.++..++..+
T Consensus 2 kiI~i~G~~GsGKsT~~~~L~~~l~~~~~~~~~~~~~~ 39 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTSSQLAMDNLRKEGVNYKMVSFGS 39 (190)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHTTTCCCEEEEHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHcCCCeEEEecCC
Confidence 458999999999999999999876 44555555443
No 81
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=96.49 E-value=0.0058 Score=63.52 Aligned_cols=19 Identities=37% Similarity=0.555 Sum_probs=15.9
Q ss_pred eEEEEccCCChHHHHHHHH
Q 005003 292 GVLLVGPPGTGKTLLAKAI 310 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAl 310 (720)
-.+|+||||||||+++..+
T Consensus 165 ~~vI~G~pGTGKTt~i~~~ 183 (359)
T d1w36d1 165 ISVISGGPGTGKTTTVAKL 183 (359)
T ss_dssp EEEEECCTTSTHHHHHHHH
T ss_pred eEEEEcCCCCCceehHHHH
Confidence 4899999999999887543
No 82
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=96.49 E-value=0.0027 Score=61.45 Aligned_cols=40 Identities=28% Similarity=0.356 Sum_probs=30.1
Q ss_pred CcCCceEEEEccCCChHHHHHHHHHHhc---CCCEEEEechhh
Q 005003 287 ARIPKGVLLVGPPGTGKTLLAKAIAGEA---GVPFFSISGSEF 326 (720)
Q Consensus 287 ~~~prgVLL~GPPGTGKT~LArAlA~e~---g~pf~~vs~s~~ 326 (720)
...|.-++|.||+|+|||+.+--+|..+ +.++..+++..+
T Consensus 8 ~~~p~vi~lvGptGvGKTTTiAKLAa~~~~~~~kV~lit~Dt~ 50 (213)
T d1vmaa2 8 PEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTF 50 (213)
T ss_dssp SSSCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTT
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEeeccc
Confidence 3457779999999999999877777543 667777766554
No 83
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=96.46 E-value=0.0019 Score=63.74 Aligned_cols=24 Identities=33% Similarity=0.422 Sum_probs=21.2
Q ss_pred ceEEEEccCCChHHHHHHHHHHhc
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAGEA 314 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~e~ 314 (720)
.-+.|.||+|+|||||++.+++..
T Consensus 30 e~vaIvG~sGsGKSTLl~ll~gl~ 53 (241)
T d2pmka1 30 EVIGIVGRSGSGKSTLTKLIQRFY 53 (241)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCCCHHHHHHHHHhcC
Confidence 349999999999999999998844
No 84
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=96.46 E-value=0.0026 Score=62.76 Aligned_cols=39 Identities=21% Similarity=0.180 Sum_probs=29.5
Q ss_pred cCcCCceEEEEccCCChHHHHHHHHHHh----cCCCEEEEech
Q 005003 286 GARIPKGVLLVGPPGTGKTLLAKAIAGE----AGVPFFSISGS 324 (720)
Q Consensus 286 g~~~prgVLL~GPPGTGKT~LArAlA~e----~g~pf~~vs~s 324 (720)
|..+..-++|.|+||+|||+++..+|.. .|.++.+++..
T Consensus 31 G~~~G~l~vi~G~~G~GKT~~~~~la~~~a~~~g~~v~~~s~E 73 (277)
T d1cr2a_ 31 GARGGEVIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAMLE 73 (277)
T ss_dssp SBCTTCEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEESS
T ss_pred CCCCCeEEEEEeCCCCCHHHHHHHHHHhhhhhcccceeEeeec
Confidence 3444445899999999999998888643 37888888753
No 85
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=96.37 E-value=0.0018 Score=64.43 Aligned_cols=31 Identities=35% Similarity=0.413 Sum_probs=23.8
Q ss_pred hhccCcCCc--eEEEEccCCChHHHHHHHHHHh
Q 005003 283 TAIGARIPK--GVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 283 ~~~g~~~pr--gVLL~GPPGTGKT~LArAlA~e 313 (720)
..+....++ -+.|.||+|+|||||++.+++-
T Consensus 35 ~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~gl 67 (255)
T d2hyda1 35 KDINLSIEKGETVAFVGMSGGGKSTLINLIPRF 67 (255)
T ss_dssp EEEEEEECTTCEEEEECSTTSSHHHHHTTTTTS
T ss_pred eceEEEEcCCCEEEEECCCCCcHHHHHHHHHhc
Confidence 333444443 4999999999999999999873
No 86
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=96.34 E-value=0.0023 Score=63.48 Aligned_cols=30 Identities=40% Similarity=0.593 Sum_probs=23.5
Q ss_pred hccCcCCc--eEEEEccCCChHHHHHHHHHHh
Q 005003 284 AIGARIPK--GVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 284 ~~g~~~pr--gVLL~GPPGTGKT~LArAlA~e 313 (720)
.....+++ -+-|.||+|+|||||++.+++-
T Consensus 33 ~isl~i~~Ge~iaivG~sGsGKSTLl~ll~gl 64 (253)
T d3b60a1 33 NINLKIPAGKTVALVGRSGSGKSTIASLITRF 64 (253)
T ss_dssp EEEEEECTTCEEEEEECTTSSHHHHHHHHTTT
T ss_pred ceEEEEcCCCEEEEECCCCChHHHHHHHHhcc
Confidence 33344443 5999999999999999999873
No 87
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=96.32 E-value=0.00078 Score=69.39 Aligned_cols=68 Identities=26% Similarity=0.307 Sum_probs=46.3
Q ss_pred ceEEEEccCCChHHHHHHHHHHhcC--CCEEEEe-chhhH-------HHHhhhchHHHHHHHHHHHhcCCeEEEEccc
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAGEAG--VPFFSIS-GSEFV-------EMFVGVGASRVRDLFKKAKENAPCIVFVDEI 358 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~e~g--~pf~~vs-~s~~~-------~~~~G~~~~~vr~lF~~A~~~~P~ILfIDEI 358 (720)
+++|++||+|+|||++.+++++... ..++.+- ..++. ....+.+.-...++++.+.+..|..|++.|+
T Consensus 167 ~nili~G~tgSGKTT~l~al~~~i~~~~rivtiEd~~El~l~~~~~~~~~~~~~~~~~~~ll~~~lR~~pd~iivgEi 244 (323)
T d1g6oa_ 167 KNVIVCGGTGSGKTTYIKSIMEFIPKEERIISIEDTEEIVFKHHKNYTQLFFGGNITSADCLKSCLRMRPDRIILGEL 244 (323)
T ss_dssp CCEEEEESTTSSHHHHHHHHGGGSCTTCCEEEEESSCCCCCSSCSSEEEEECBTTBCHHHHHHHHTTSCCSEEEESCC
T ss_pred CCEEEEeeccccchHHHHHHhhhcccccceeeccchhhhhcccccccceeccccchhHHHHHHHHhccCCCcccCCcc
Confidence 3799999999999999999998763 2333331 11111 0011122234567888888999999999998
No 88
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=96.29 E-value=0.0044 Score=60.72 Aligned_cols=37 Identities=27% Similarity=0.377 Sum_probs=28.1
Q ss_pred CceEEEEccCCChHHHHHHHHHHhc-------------CCCEEEEechhh
Q 005003 290 PKGVLLVGPPGTGKTLLAKAIAGEA-------------GVPFFSISGSEF 326 (720)
Q Consensus 290 prgVLL~GPPGTGKT~LArAlA~e~-------------g~pf~~vs~s~~ 326 (720)
..-.+|+|+||+|||+++-.+|... +.++++++..+.
T Consensus 29 g~~~~i~G~~G~GKS~l~l~la~~ia~g~~~~~~~~~~~~~vl~~~~E~~ 78 (274)
T d1nlfa_ 29 GTVGALVSPGGAGKSMLALQLAAQIAGGPDLLEVGELPTGPVIYLPAEDP 78 (274)
T ss_dssp TSEEEEEESTTSSHHHHHHHHHHHHHTCCCTTCCCCCCCCCEEEEESSSC
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHHcCCCcccccccCCCceEEEeccch
Confidence 3457899999999999998887642 347888876543
No 89
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.28 E-value=0.0019 Score=61.45 Aligned_cols=78 Identities=19% Similarity=0.142 Sum_probs=47.4
Q ss_pred cCcCCceEEEEccCCChHHHHHHHHHHhc---------CCCEEEEechhhH-----H-H--Hhh----------------
Q 005003 286 GARIPKGVLLVGPPGTGKTLLAKAIAGEA---------GVPFFSISGSEFV-----E-M--FVG---------------- 332 (720)
Q Consensus 286 g~~~prgVLL~GPPGTGKT~LArAlA~e~---------g~pf~~vs~s~~~-----~-~--~~G---------------- 332 (720)
|++..+-++|+||||||||+++..+|..+ +.+.++++...-. . . ..+
T Consensus 30 Gi~~G~~~li~G~pGsGKT~l~lq~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (251)
T d1szpa2 30 GVETGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGTFRPVRLVSIAQRFGLDPDDALNNVAYARAY 109 (251)
T ss_dssp SEESSSEEEEEESTTSSHHHHHHHHTTTTTSCTTTTCCSCEEEEEESSSCCCGGGGHHHHHHTCCCHHHHGGGEEEEECC
T ss_pred CCcCCeEEEEEcCCCCCHHHHHHHHHHHhhhhhhhccCCceEEEEeecchHHHHHHHHHHHhcCCchhhhhcceEEEecc
Confidence 35555679999999999999999887543 3456666543211 0 0 000
Q ss_pred ---hchHHHHHHHHHHHhcCCeEEEEccchhccc
Q 005003 333 ---VGASRVRDLFKKAKENAPCIVFVDEIDAVGR 363 (720)
Q Consensus 333 ---~~~~~vr~lF~~A~~~~P~ILfIDEID~l~~ 363 (720)
.................++++++|.+..+..
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~ds~~~~~~ 143 (251)
T d1szpa2 110 NADHQLRLLDAAAQMMSESRFSLIVVDSVMALYR 143 (251)
T ss_dssp STTTHHHHHHHTHHHHHHSCEEEEEEETGGGGGS
T ss_pred chhHHHHHHHHHHHHhhccccceeeehhhhhhhh
Confidence 0111222334444556778999999988753
No 90
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=96.19 E-value=0.0018 Score=62.24 Aligned_cols=39 Identities=21% Similarity=0.302 Sum_probs=32.6
Q ss_pred CceEEEEccCCChHHHHHHHHHHhc----CCCEEEEechhhHH
Q 005003 290 PKGVLLVGPPGTGKTLLAKAIAGEA----GVPFFSISGSEFVE 328 (720)
Q Consensus 290 prgVLL~GPPGTGKT~LArAlA~e~----g~pf~~vs~s~~~~ 328 (720)
+.-|+|+|.||+|||++|++|+..+ +.+++.+++..+..
T Consensus 24 g~vIwltGlsGsGKTTia~~L~~~l~~~~~~~~~~ldgD~iR~ 66 (208)
T d1m7ga_ 24 GLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIRF 66 (208)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCEEEECHHHHTT
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHhcCceEEEEcchHHHH
Confidence 4469999999999999999998754 77888888877654
No 91
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=96.11 E-value=0.0021 Score=58.71 Aligned_cols=34 Identities=21% Similarity=0.270 Sum_probs=27.1
Q ss_pred eEEEEccCCChHHHHHHHHHHhc---CCCEEEEechh
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEA---GVPFFSISGSE 325 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~---g~pf~~vs~s~ 325 (720)
-++|.|+||+||||+++.+|+.+ +..+..++..+
T Consensus 3 iivi~G~~GsGKTT~~~~La~~L~~~~~~~~~~~~~d 39 (194)
T d1nksa_ 3 IGIVTGIPGVGKSTVLAKVKEILDNQGINNKIINYGD 39 (194)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHTTTCCEEEEEHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence 47899999999999999999977 45566665443
No 92
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=96.05 E-value=0.0087 Score=56.28 Aligned_cols=18 Identities=56% Similarity=0.791 Sum_probs=15.5
Q ss_pred ceEEEEccCCChHHHHHH
Q 005003 291 KGVLLVGPPGTGKTLLAK 308 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LAr 308 (720)
+.+++.+|+|+|||+.+-
T Consensus 41 ~~~il~apTGsGKT~~a~ 58 (202)
T d2p6ra3 41 KNLLLAMPTAAGKTLLAE 58 (202)
T ss_dssp SCEEEECSSHHHHHHHHH
T ss_pred CCEEEEcCCCCchhHHHH
Confidence 369999999999998763
No 93
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=96.00 E-value=0.0014 Score=58.97 Aligned_cols=31 Identities=29% Similarity=0.226 Sum_probs=25.2
Q ss_pred eEEEEccCCChHHHHHHHHHHhc---CCCEEEEe
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEA---GVPFFSIS 322 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~---g~pf~~vs 322 (720)
-+.++|+||||||||++.+++++ |..+..+.
T Consensus 4 vi~itG~~GSGKTTL~~~L~~~l~~~g~~v~v~~ 37 (170)
T d1np6a_ 4 LLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIK 37 (170)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEec
Confidence 48899999999999999999864 66555544
No 94
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=95.84 E-value=0.0091 Score=58.27 Aligned_cols=21 Identities=33% Similarity=0.593 Sum_probs=19.7
Q ss_pred eEEEEccCCChHHHHHHHHHH
Q 005003 292 GVLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~ 312 (720)
-+-|.||+|+|||||.+.+++
T Consensus 33 ~~~iiG~sGsGKSTLl~~i~g 53 (230)
T d1l2ta_ 33 FVSIMGPSGSGKSTMLNIIGC 53 (230)
T ss_dssp EEEEECSTTSSHHHHHHHHTT
T ss_pred EEEEECCCCCCcchhhHhccC
Confidence 488999999999999999987
No 95
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=95.83 E-value=0.0063 Score=55.86 Aligned_cols=36 Identities=19% Similarity=0.231 Sum_probs=26.7
Q ss_pred CceEEEEccCCChHHHHHHHHHHhc---CCCEEEEechh
Q 005003 290 PKGVLLVGPPGTGKTLLAKAIAGEA---GVPFFSISGSE 325 (720)
Q Consensus 290 prgVLL~GPPGTGKT~LArAlA~e~---g~pf~~vs~s~ 325 (720)
|.-|-|.||+|+||||+|+.|+..+ +.....++...
T Consensus 22 ~~iIgI~G~~GSGKSTla~~L~~~l~~~~~~~~~~~~~~ 60 (198)
T d1rz3a_ 22 RLVLGIDGLSRSGKTTLANQLSQTLREQGISVCVFHMDD 60 (198)
T ss_dssp SEEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEGGG
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHhccccccceeccccc
Confidence 3346699999999999999998865 44555555433
No 96
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.82 E-value=0.0042 Score=61.48 Aligned_cols=31 Identities=26% Similarity=0.411 Sum_probs=24.0
Q ss_pred hhccCcCCc--eEEEEccCCChHHHHHHHHHHh
Q 005003 283 TAIGARIPK--GVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 283 ~~~g~~~pr--gVLL~GPPGTGKT~LArAlA~e 313 (720)
..+...+++ -+.|.||+|+|||||++.+++-
T Consensus 31 ~~isl~i~~Ge~vaivG~sGsGKSTLl~li~gl 63 (251)
T d1jj7a_ 31 QGLTFTLRPGEVTALVGPNGSGKSTVAALLQNL 63 (251)
T ss_dssp EEEEEEECTTCEEEEECSTTSSHHHHHHHHTTS
T ss_pred eceEEEEcCCCEEEEECCCCCcHHHHHHHHhcc
Confidence 334444444 4899999999999999999873
No 97
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.67 E-value=0.0034 Score=58.69 Aligned_cols=26 Identities=35% Similarity=0.577 Sum_probs=23.1
Q ss_pred ceEEEEccCCChHHHHHHHHHHhcCC
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAGEAGV 316 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~e~g~ 316 (720)
|.|+|+||+|+|||+|++.++.+...
T Consensus 2 rpIvl~GpsG~GK~tl~~~L~~~~~~ 27 (186)
T d1gkya_ 2 RPIVISGPSGTGKSTLLKKLFAEYPD 27 (186)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHHCTT
T ss_pred CeEEEECCCCCCHHHHHHHHHHhCCc
Confidence 46999999999999999999998643
No 98
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=95.65 E-value=0.027 Score=54.78 Aligned_cols=104 Identities=16% Similarity=0.219 Sum_probs=59.6
Q ss_pred ceEEEEccCCChHHHHHHHHHHh-----cCCC--------------EEEEechhhHH---HHhhhchHHHHHHHHHHHhc
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAGE-----AGVP--------------FFSISGSEFVE---MFVGVGASRVRDLFKKAKEN 348 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~e-----~g~p--------------f~~vs~s~~~~---~~~G~~~~~vr~lF~~A~~~ 348 (720)
+.++|+||...|||++.|.+|-- .|.+ |..+...+-.. .....-..++..+++.+..
T Consensus 42 ~~~iiTGpN~~GKSt~lk~i~l~~~laq~G~~VpA~~a~~~~~d~I~~~~~~~d~~~~~~S~F~~E~~~~~~il~~~~~- 120 (234)
T d1wb9a2 42 RMLIITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATE- 120 (234)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHHHTTTCCBSSSEEEECCCCEEEEEEC-----------CHHHHHHHHHHHHHCCT-
T ss_pred eEEEEeccCchhhHHHHHHHHHHHHHHHcCCeEecCceecccchhheeEEccCcccccchhHHHHHHHHHHHHHHhccc-
Confidence 57899999999999999999652 2321 11222222111 1122223456666666543
Q ss_pred CCeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhhhcCccCCCcEEEEEEeCCCCcc
Q 005003 349 APCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADIL 408 (720)
Q Consensus 349 ~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~ldg~~~~~~ViVIaaTN~p~~L 408 (720)
.++++|||+-. +....+.......++..+.. ..+..+|.||...+..
T Consensus 121 -~sLvliDE~~~---------gT~~~eg~~l~~a~l~~l~~---~~~~~~i~tTH~~~l~ 167 (234)
T d1wb9a2 121 -YSLVLMDEIGR---------GTSTYDGLSLAWACAENLAN---KIKALTLFATHYFELT 167 (234)
T ss_dssp -TEEEEEESCCC---------CSSSSHHHHHHHHHHHHHHH---TTCCEEEEECSCGGGG
T ss_pred -ccEEeeccccc---------CCChhhhhHHHHHhhhhhhc---cccceEEEecchHHHh
Confidence 47999999844 23345555555566655521 3445788888875543
No 99
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.62 E-value=0.0034 Score=58.98 Aligned_cols=28 Identities=39% Similarity=0.629 Sum_probs=23.8
Q ss_pred ceEEEEccCCChHHHHHHHHHHhcCCCE
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAGEAGVPF 318 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~e~g~pf 318 (720)
|.|+|+||+|+|||++++.++.+.+.-|
T Consensus 1 rpIvl~GPsGsGK~tl~~~L~~~~~~~~ 28 (190)
T d1lvga_ 1 RPVVLSGPSGAGKSTLLKKLFQEHSSIF 28 (190)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHHHTTTE
T ss_pred CeEEEECCCCCCHHHHHHHHHHhCCCce
Confidence 3589999999999999999999875433
No 100
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=95.46 E-value=0.0065 Score=59.44 Aligned_cols=21 Identities=52% Similarity=0.855 Sum_probs=19.7
Q ss_pred eEEEEccCCChHHHHHHHHHH
Q 005003 292 GVLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~ 312 (720)
-+-|.||+|+|||||.+.+++
T Consensus 28 i~~liGpsGsGKSTLl~~i~G 48 (232)
T d2awna2 28 FVVFVGPSGCGKSTLLRMIAG 48 (232)
T ss_dssp EEEEECCTTSSHHHHHHHHHT
T ss_pred EEEEECCCCChHHHHHHHHhc
Confidence 488999999999999999988
No 101
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=95.43 E-value=0.0062 Score=52.57 Aligned_cols=34 Identities=21% Similarity=0.146 Sum_probs=21.8
Q ss_pred CceEEEEccCCChHHHHHH-HHHH---hcCCCEEEEec
Q 005003 290 PKGVLLVGPPGTGKTLLAK-AIAG---EAGVPFFSISG 323 (720)
Q Consensus 290 prgVLL~GPPGTGKT~LAr-AlA~---e~g~pf~~vs~ 323 (720)
.+.++|++|+|+|||..+- ++.. +.+..++.+..
T Consensus 7 ~~~~il~~~tGsGKT~~~~~~~~~~~~~~~~~vli~~p 44 (140)
T d1yksa1 7 GMTTVLDFHPGAGKTRRFLPQILAECARRRLRTLVLAP 44 (140)
T ss_dssp TCEEEECCCTTSSTTTTHHHHHHHHHHHTTCCEEEEES
T ss_pred CCcEEEEcCCCCChhHHHHHHHHHHhhhcCceeeeeec
Confidence 3579999999999996653 3332 33444444443
No 102
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=95.36 E-value=0.03 Score=52.93 Aligned_cols=37 Identities=30% Similarity=0.382 Sum_probs=29.3
Q ss_pred eEEEEccCCChHHHHHHHHHHhcCCCEEEEech-hhHH
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGS-EFVE 328 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s-~~~~ 328 (720)
..++..|+|+|||.++-+++.+.+.+.+.+... .+.+
T Consensus 87 ~~ll~~~tG~GKT~~a~~~~~~~~~~~Liv~p~~~L~~ 124 (206)
T d2fz4a1 87 RGCIVLPTGSGKTHVAMAAINELSTPTLIVVPTLALAE 124 (206)
T ss_dssp EEEEEESSSTTHHHHHHHHHHHSCSCEEEEESSHHHHH
T ss_pred CcEEEeCCCCCceehHHhHHHHhcCceeEEEcccchHH
Confidence 357889999999999999999998887776653 4443
No 103
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=95.34 E-value=0.015 Score=57.08 Aligned_cols=28 Identities=39% Similarity=0.578 Sum_probs=22.5
Q ss_pred cCcCCc--eEEEEccCCChHHHHHHHHHHh
Q 005003 286 GARIPK--GVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 286 g~~~pr--gVLL~GPPGTGKT~LArAlA~e 313 (720)
....++ -+-|.||+|+|||||.+.+++-
T Consensus 26 sl~v~~Ge~~~liGpsGaGKSTLl~~i~Gl 55 (239)
T d1v43a3 26 NLTIKDGEFLVLLGPSGCGKTTTLRMIAGL 55 (239)
T ss_dssp EEEECTTCEEEEECCTTSSHHHHHHHHHTS
T ss_pred eEEECCCCEEEEECCCCChHHHHHHHHHcC
Confidence 334444 4789999999999999999883
No 104
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=95.34 E-value=0.0027 Score=62.55 Aligned_cols=28 Identities=21% Similarity=0.379 Sum_probs=22.5
Q ss_pred ccCcCCc--eEEEEccCCChHHHHHHHHHH
Q 005003 285 IGARIPK--GVLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 285 ~g~~~pr--gVLL~GPPGTGKT~LArAlA~ 312 (720)
.....++ -+.|.||+|+|||||++.+++
T Consensus 21 isl~i~~Ge~vaivG~sGsGKSTLl~ll~g 50 (242)
T d1mv5a_ 21 ISFEAQPNSIIAFAGPSGGGKSTIFSLLER 50 (242)
T ss_dssp EEEEECTTEEEEEECCTTSSHHHHHHHHTT
T ss_pred eEEEEcCCCEEEEECCCCCCHHHHHHHHHH
Confidence 3344444 488999999999999999987
No 105
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=95.33 E-value=0.013 Score=57.47 Aligned_cols=23 Identities=35% Similarity=0.430 Sum_probs=20.3
Q ss_pred eEEEEccCCChHHHHHHHHHHhc
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEA 314 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~ 314 (720)
-+-|.||.|+|||||.+++++..
T Consensus 30 i~glvG~nGaGKSTLl~~l~G~~ 52 (238)
T d1vpla_ 30 IFGLIGPNGAGKTTTLRIISTLI 52 (238)
T ss_dssp EEEEECCTTSSHHHHHHHHTTSS
T ss_pred EEEEECCCCCCHHHHHHHHhcCC
Confidence 46799999999999999998843
No 106
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=95.31 E-value=0.016 Score=55.13 Aligned_cols=23 Identities=43% Similarity=0.495 Sum_probs=20.4
Q ss_pred eEEEEccCCChHHHHHHHHHHhc
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEA 314 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~ 314 (720)
-+.|.||.|+|||||.+.+++..
T Consensus 29 i~~l~G~NGsGKSTLl~~i~gl~ 51 (200)
T d1sgwa_ 29 VVNFHGPNGIGKTTLLKTISTYL 51 (200)
T ss_dssp CEEEECCTTSSHHHHHHHHTTSS
T ss_pred EEEEECCCCChHHHHHHHHhccc
Confidence 47899999999999999998843
No 107
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=95.25 E-value=0.013 Score=57.47 Aligned_cols=22 Identities=45% Similarity=0.703 Sum_probs=20.1
Q ss_pred eEEEEccCCChHHHHHHHHHHh
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e 313 (720)
-+-|.||+|+||||+++++++-
T Consensus 31 ~~~liG~sGaGKSTll~~i~gl 52 (240)
T d1g2912 31 FMILLGPSGCGKTTTLRMIAGL 52 (240)
T ss_dssp EEEEECSTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCChHHHHHHHHhcC
Confidence 4889999999999999999883
No 108
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.21 E-value=0.0046 Score=56.74 Aligned_cols=29 Identities=24% Similarity=0.243 Sum_probs=24.0
Q ss_pred cCcCCceEEEEccCCChHHHHHHHHHHhc
Q 005003 286 GARIPKGVLLVGPPGTGKTLLAKAIAGEA 314 (720)
Q Consensus 286 g~~~prgVLL~GPPGTGKT~LArAlA~e~ 314 (720)
|+++..-++|+||||+|||++|..+|..+
T Consensus 19 Gi~~G~v~~i~G~~GsGKT~l~l~la~~~ 47 (242)
T d1n0wa_ 19 GIETGSITEMFGEFRTGKTQICHTLAVTC 47 (242)
T ss_dssp SEETTSEEEEECCTTSSHHHHHHHHHHHT
T ss_pred CCcCCEEEEEEeCCCCCHHHHHHHHHHHH
Confidence 34555579999999999999999998764
No 109
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=95.15 E-value=0.0056 Score=59.81 Aligned_cols=22 Identities=45% Similarity=0.760 Sum_probs=20.2
Q ss_pred eEEEEccCCChHHHHHHHHHHh
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e 313 (720)
-+.|.||+|+||||+.+.+++-
T Consensus 28 ~~~liGpsGaGKSTll~~l~Gl 49 (229)
T d3d31a2 28 YFVILGPTGAGKTLFLELIAGF 49 (229)
T ss_dssp EEEEECCCTHHHHHHHHHHHTS
T ss_pred EEEEECCCCCcHHHHHHHHhcC
Confidence 3889999999999999999983
No 110
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=95.14 E-value=0.016 Score=56.72 Aligned_cols=22 Identities=23% Similarity=0.326 Sum_probs=20.0
Q ss_pred eEEEEccCCChHHHHHHHHHHh
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e 313 (720)
-+-|.||+|+|||||++.+++-
T Consensus 33 ~~~iiG~sGsGKSTLl~~i~Gl 54 (240)
T d3dhwc1 33 IYGVIGASGAGKSTLIRCVNLL 54 (240)
T ss_dssp EEEEEESTTSSHHHHHHHHTTS
T ss_pred EEEEECCCCCCHHHHHHHHcCC
Confidence 4889999999999999999873
No 111
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.03 E-value=0.026 Score=52.74 Aligned_cols=23 Identities=39% Similarity=0.496 Sum_probs=20.9
Q ss_pred ceEEEEccCCChHHHHHHHHHHh
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~e 313 (720)
|.|+|.|+||+|||+|..++.+.
T Consensus 1 k~V~ivG~~~~GKTsLl~~l~~~ 23 (207)
T d2fh5b1 1 RAVLFVGLCDSGKTLLFVRLLTG 23 (207)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHHcC
Confidence 47999999999999999999763
No 112
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=94.96 E-value=0.022 Score=55.16 Aligned_cols=100 Identities=20% Similarity=0.214 Sum_probs=56.9
Q ss_pred eEEEEccCCChHHHHHHHHHHh-----cCCC--------------EEEEechhhHHH---HhhhchHHHHHHHHHHHhcC
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGE-----AGVP--------------FFSISGSEFVEM---FVGVGASRVRDLFKKAKENA 349 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e-----~g~p--------------f~~vs~s~~~~~---~~G~~~~~vr~lF~~A~~~~ 349 (720)
.++|+||...|||++.|.++-- .|.+ +..+...+-... ....-.++++.+++.+ ..
T Consensus 37 ~~iiTGpN~~GKSt~lk~i~l~~ilAq~G~~vpA~~~~i~~~d~I~~~~~~~d~~~~~~StF~~el~~~~~il~~~--~~ 114 (224)
T d1ewqa2 37 LVLITGPNMAGKSTFLRQTALIALLAQVGSFVPAEEAHLPLFDGIYTRIGASDDLAGGKSTFMVEMEEVALILKEA--TE 114 (224)
T ss_dssp EEEEESCSSSSHHHHHHHHHHHHHHHTTTCCBSSSEEEECCCSEEEEECCC------CCSHHHHHHHHHHHHHHHC--CT
T ss_pred EEEEECCCccccchhhhhhHHHHHHHhccceeecCceEEeecceEEEEECCCccccCCccHHHHhHHHHHHHhccC--CC
Confidence 5899999999999999999652 2321 112222222111 1122234556666654 34
Q ss_pred CeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhhhcCccCCCcEEEEEEeCCCC
Q 005003 350 PCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRAD 406 (720)
Q Consensus 350 P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~ldg~~~~~~ViVIaaTN~p~ 406 (720)
.++++|||+-. +....+.......+++.+... +..++.+|+..+
T Consensus 115 ~sLvliDE~~~---------gT~~~eg~ala~aile~L~~~----~~~~i~tTH~~e 158 (224)
T d1ewqa2 115 NSLVLLDEVGR---------GTSSLDGVAIATAVAEALHER----RAYTLFATHYFE 158 (224)
T ss_dssp TEEEEEESTTT---------TSCHHHHHHHHHHHHHHHHHH----TCEEEEECCCHH
T ss_pred CcEEeeccccc---------CcchhhhcchHHHHHHHHhhc----CcceEEeeechh
Confidence 57999999844 223445555566666666432 346777887654
No 113
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.83 E-value=0.0078 Score=57.45 Aligned_cols=29 Identities=28% Similarity=0.189 Sum_probs=23.8
Q ss_pred cCcCCceEEEEccCCChHHHHHHHHHHhc
Q 005003 286 GARIPKGVLLVGPPGTGKTLLAKAIAGEA 314 (720)
Q Consensus 286 g~~~prgVLL~GPPGTGKT~LArAlA~e~ 314 (720)
|++..+-++|+||||+|||++|..+|...
T Consensus 33 Gip~G~~~~i~G~~GsGKT~lalq~~~~~ 61 (258)
T d1v5wa_ 33 GIESMAITEAFGEFRTGKTQLSHTLCVTA 61 (258)
T ss_dssp SBCSSEEEEEECCTTCTHHHHHHHHHHHT
T ss_pred CCcCCEEEEEECCCCCCHHHHHHHHHHHH
Confidence 45555569999999999999999998643
No 114
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=94.81 E-value=0.0085 Score=57.35 Aligned_cols=28 Identities=29% Similarity=0.260 Sum_probs=23.0
Q ss_pred CcCCceEEEEccCCChHHHHHHHHHHhc
Q 005003 287 ARIPKGVLLVGPPGTGKTLLAKAIAGEA 314 (720)
Q Consensus 287 ~~~prgVLL~GPPGTGKT~LArAlA~e~ 314 (720)
.+..+-++|+||||+|||+++-.+|.+.
T Consensus 33 lp~G~~~li~G~pGsGKT~~~lq~~~~~ 60 (254)
T d1pzna2 33 IETQAITEVFGEFGSGKTQLAHTLAVMV 60 (254)
T ss_dssp EESSEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred ccCCEEEEEEcCCCCCHHHHHHHHHHHh
Confidence 4445569999999999999999887654
No 115
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.81 E-value=0.011 Score=55.74 Aligned_cols=37 Identities=22% Similarity=0.284 Sum_probs=28.4
Q ss_pred CceEEEEccCCChHHHHHHHHHHhcCC--------CEEEEechhh
Q 005003 290 PKGVLLVGPPGTGKTLLAKAIAGEAGV--------PFFSISGSEF 326 (720)
Q Consensus 290 prgVLL~GPPGTGKT~LArAlA~e~g~--------pf~~vs~s~~ 326 (720)
|--|-|.||+|+||||+|+.|+..++. ....++..+|
T Consensus 2 P~iIgI~G~~gSGKSTla~~L~~~l~~~~~~~~~~~~~vi~~D~y 46 (213)
T d1uj2a_ 2 PFLIGVSGGTASGKSSVCAKIVQLLGQNEVDYRQKQVVILSQDSF 46 (213)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHTTGGGSCGGGCSEEEEEGGGG
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHhchhccccCCCceEEEecccc
Confidence 445779999999999999999998754 3455665554
No 116
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=94.80 E-value=0.026 Score=50.22 Aligned_cols=22 Identities=41% Similarity=0.738 Sum_probs=19.6
Q ss_pred eEEEEccCCChHHHHHHHHHHh
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e 313 (720)
-|+|.|+||+|||+|..++.++
T Consensus 3 kI~lvG~~nvGKSsLin~l~~~ 24 (161)
T d2gj8a1 3 KVVIAGRPNAGKSSLLNALAGR 24 (161)
T ss_dssp EEEEEESTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 3899999999999999999753
No 117
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.79 E-value=0.012 Score=54.76 Aligned_cols=25 Identities=20% Similarity=0.472 Sum_probs=22.1
Q ss_pred CceEEEEccCCChHHHHHHHHHHhc
Q 005003 290 PKGVLLVGPPGTGKTLLAKAIAGEA 314 (720)
Q Consensus 290 prgVLL~GPPGTGKT~LArAlA~e~ 314 (720)
.|.|+|.||+|+|||+|++.+..+.
T Consensus 3 ~k~ivl~Gpsg~GK~tl~~~L~~~~ 27 (178)
T d1kgda_ 3 RKTLVLLGAHGVGRRHIKNTLITKH 27 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHC
T ss_pred CCcEEEECCCCCCHHHHHHHHHHhC
Confidence 4579999999999999999998754
No 118
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=94.77 E-value=0.011 Score=58.03 Aligned_cols=21 Identities=43% Similarity=0.767 Sum_probs=19.9
Q ss_pred eEEEEccCCChHHHHHHHHHH
Q 005003 292 GVLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~ 312 (720)
-+-|.||+|+||||+.+.+++
T Consensus 33 ~~~iiG~sGsGKSTll~~i~g 53 (242)
T d1oxxk2 33 RFGILGPSGAGKTTFMRIIAG 53 (242)
T ss_dssp EEEEECSCHHHHHHHHHHHHT
T ss_pred EEEEECCCCCcHHHHHHHHHc
Confidence 488999999999999999998
No 119
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=94.77 E-value=0.098 Score=51.67 Aligned_cols=131 Identities=21% Similarity=0.257 Sum_probs=74.3
Q ss_pred hHHHHHHHHHHHHhcCchhhhhccCcCCceEEEEccCCChHHHHHHHHHH---hcCCCEEEEechhhHH---------HH
Q 005003 263 DEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAG---EAGVPFFSISGSEFVE---------MF 330 (720)
Q Consensus 263 de~k~eL~eiv~~l~~p~~~~~~g~~~prgVLL~GPPGTGKT~LArAlA~---e~g~pf~~vs~s~~~~---------~~ 330 (720)
+++++.+.++...+..+. |..-||+|..|+|||.+|-..+. +.|..+..+-..+... .+
T Consensus 86 ~~Q~~ai~ei~~d~~~~~---------~m~rLL~GdvGSGKT~Va~~a~~~~~~~g~q~~~m~Pt~~La~Qh~~~~~~~f 156 (264)
T d1gm5a3 86 NAQKRAHQEIRNDMISEK---------PMNRLLQGDVGSGKTVVAQLAILDNYEAGFQTAFMVPTSILAIQHYRRTVESF 156 (264)
T ss_dssp HHHHHHHHHHHHHHHSSS---------CCCCEEECCSSSSHHHHHHHHHHHHHHHTSCEEEECSCHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhhccC---------cceeeeeccccccccHHHHHHHHHHHhcccceeEEeehHhhhHHHHHHHHHhh
Confidence 567777778777765543 45689999999999988776644 3466666554433321 11
Q ss_pred h-----------hhchHHHHHHHHHHHhc-------------------CCeEEEEccchhcccccCCCCCCCChHHHHHH
Q 005003 331 V-----------GVGASRVRDLFKKAKEN-------------------APCIVFVDEIDAVGRQRGTGIGGGNDEREQTL 380 (720)
Q Consensus 331 ~-----------G~~~~~vr~lF~~A~~~-------------------~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~l 380 (720)
. +...+.-++++...+.. .-++++|||=|.++-+...
T Consensus 157 ~~~~~~v~~l~~~~~~~~r~~~~~~~~~g~~~iiIGThsl~~~~~~f~~LglviiDEqH~fgv~Qr~------------- 223 (264)
T d1gm5a3 157 SKFNIHVALLIGATTPSEKEKIKSGLRNGQIDVVIGTHALIQEDVHFKNLGLVIIDEQHRFGVKQRE------------- 223 (264)
T ss_dssp TCSSCCEEECCSSSCHHHHHHHHHHHHSSCCCEEEECTTHHHHCCCCSCCCEEEEESCCCC-----C-------------
T ss_pred hhccccceeeccccchHHHHHHHHHHHCCCCCEEEeehHHhcCCCCccccceeeeccccccchhhHH-------------
Confidence 0 11223334445544332 2257889999888533211
Q ss_pred HHHHhhhcCccCCCcEEEEEEeCCCCccchhhcCCCccccee
Q 005003 381 NQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQV 422 (720)
Q Consensus 381 n~LL~~ldg~~~~~~ViVIaaTN~p~~LD~ALlrpgRFdr~I 422 (720)
.+.....+.++++..||--|..+--++. |.+|..+
T Consensus 224 -----~l~~~~~~~~~l~~SATPiprtl~~~~~--g~~~~s~ 258 (264)
T d1gm5a3 224 -----ALMNKGKMVDTLVMSATPIPRSMALAFY--GDLDVTV 258 (264)
T ss_dssp -----CCCSSSSCCCEEEEESSCCCHHHHHHHT--CCSSCEE
T ss_pred -----HHHHhCcCCCEEEEECCCCHHHHHHHHc--CCCCeEe
Confidence 1111122456888888887877655443 3666433
No 120
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=94.56 E-value=0.011 Score=54.59 Aligned_cols=25 Identities=24% Similarity=0.497 Sum_probs=22.1
Q ss_pred ceEEEEccCCChHHHHHHHHHHhcC
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAGEAG 315 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~e~g 315 (720)
+-|+|.||+|+|||++++.+..+..
T Consensus 3 ~iivl~GpsG~GK~tl~~~L~~~~~ 27 (182)
T d1znwa1 3 RVVVLSGPSAVGKSTVVRCLRERIP 27 (182)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHST
T ss_pred eEEEEECCCCCCHHHHHHHHHhhCC
Confidence 4589999999999999999998763
No 121
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=94.50 E-value=0.025 Score=55.37 Aligned_cols=22 Identities=50% Similarity=0.593 Sum_probs=20.0
Q ss_pred eEEEEccCCChHHHHHHHHHHh
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e 313 (720)
-+-|.||.|+|||||.+++++-
T Consensus 34 i~~liGpnGaGKSTl~~~i~Gl 55 (240)
T d1ji0a_ 34 IVTLIGANGAGKTTTLSAIAGL 55 (240)
T ss_dssp EEEEECSTTSSHHHHHHHHTTS
T ss_pred EEEEECCCCCcHHHHHHHHhCC
Confidence 4889999999999999999883
No 122
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=94.44 E-value=0.021 Score=52.80 Aligned_cols=36 Identities=22% Similarity=0.359 Sum_probs=27.3
Q ss_pred CceEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHH
Q 005003 290 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVE 328 (720)
Q Consensus 290 prgVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~ 328 (720)
|--|-|+|++|+|||++|+.+ .+.|.+++ +..++..
T Consensus 3 p~IIgitG~~gSGKstva~~l-~~~g~~~~--~~D~~~~ 38 (191)
T d1uf9a_ 3 PIIIGITGNIGSGKSTVAALL-RSWGYPVL--DLDALAA 38 (191)
T ss_dssp CEEEEEEECTTSCHHHHHHHH-HHTTCCEE--EHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHH-HHCCCeEE--EccHHHH
Confidence 445679999999999999999 56788776 4444443
No 123
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=94.43 E-value=0.15 Score=49.40 Aligned_cols=54 Identities=20% Similarity=0.133 Sum_probs=36.5
Q ss_pred hHHHHHHHHHHHHhcCchhhhhccCcCCceEEEEccCCChHHHHHHHHHHh---cCCCEEEEechh
Q 005003 263 DEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGE---AGVPFFSISGSE 325 (720)
Q Consensus 263 de~k~eL~eiv~~l~~p~~~~~~g~~~prgVLL~GPPGTGKT~LArAlA~e---~g~pf~~vs~s~ 325 (720)
.++++.+.++.+.+..+. |...||+|..|+|||.++-..+.. .|..++.+-...
T Consensus 58 ~~Q~~~~~~i~~~~~~~~---------~~~~LL~GdvGsGKT~V~~~a~~~~~~~g~qv~~l~Pt~ 114 (233)
T d2eyqa3 58 PDQAQAINAVLSDMCQPL---------AMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTT 114 (233)
T ss_dssp HHHHHHHHHHHHHHHSSS---------CCEEEEECCCCTTTHHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred hhHHHHHHHHHHHHhccC---------ccCeEEEcCCCCCcHHHHHHHHHHHHHcCCceEEEccHH
Confidence 446666667766665543 557899999999999887666543 366666655433
No 124
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=94.11 E-value=0.0098 Score=56.84 Aligned_cols=32 Identities=16% Similarity=0.236 Sum_probs=26.3
Q ss_pred CcCCceEEEEccCCChHHHHHHHHHHhcCCCE
Q 005003 287 ARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPF 318 (720)
Q Consensus 287 ~~~prgVLL~GPPGTGKT~LArAlA~e~g~pf 318 (720)
.+.-+.++|+|||+||||++|.+|++-++..+
T Consensus 50 ~PKkn~i~~~GP~~TGKS~f~~sl~~~l~G~v 81 (205)
T d1tuea_ 50 TPKKNCLVFCGPANTGKSYFGMSFIHFIQGAV 81 (205)
T ss_dssp CTTCSEEEEESCGGGCHHHHHHHHHHHHTCEE
T ss_pred CCCceEEEEECCCCccHHHHHHHHHHHhCCEE
Confidence 33345899999999999999999999886544
No 125
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=93.87 E-value=0.086 Score=45.98 Aligned_cols=21 Identities=29% Similarity=0.403 Sum_probs=19.4
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
|+|.|+||+|||+|.+.+.+.
T Consensus 3 ivlvG~~~vGKSsLi~~l~~~ 23 (160)
T d1r8sa_ 3 ILMVGLDAAGKTTILYKLKLG 23 (160)
T ss_dssp EEEECSTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhcC
Confidence 789999999999999999764
No 126
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=93.80 E-value=0.028 Score=56.99 Aligned_cols=41 Identities=22% Similarity=0.285 Sum_probs=33.7
Q ss_pred CcCCceEEEEccCCChHHHHHHHHHHhc-----CCCEEEEechhhH
Q 005003 287 ARIPKGVLLVGPPGTGKTLLAKAIAGEA-----GVPFFSISGSEFV 327 (720)
Q Consensus 287 ~~~prgVLL~GPPGTGKT~LArAlA~e~-----g~pf~~vs~s~~~ 327 (720)
.+.|.-|-|.|++|+||||+|+.|+..+ +..+..++..+|.
T Consensus 77 ~k~P~iIGIaG~sgSGKSTla~~L~~lL~~~~~~~~v~~Is~D~F~ 122 (308)
T d1sq5a_ 77 QRIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGFL 122 (308)
T ss_dssp CCCCEEEEEEECTTSSHHHHHHHHHHHHTTSTTCCCEEEEEGGGGB
T ss_pred CCCCEEEEEeCCCCCCCcHHHHHHHHHHhhhcCCCceEEEeeeeeE
Confidence 4567778899999999999999999876 3567778888774
No 127
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=93.78 E-value=0.066 Score=52.58 Aligned_cols=22 Identities=41% Similarity=0.748 Sum_probs=20.1
Q ss_pred eEEEEccCCChHHHHHHHHHHh
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e 313 (720)
-+-|.||.|+|||+|++++++-
T Consensus 32 i~~liG~nGaGKSTLl~~i~Gl 53 (254)
T d1g6ha_ 32 VTLIIGPNGSGKSTLINVITGF 53 (254)
T ss_dssp EEEEECSTTSSHHHHHHHHTTS
T ss_pred EEEEECCCCCcHHHHHHHHHCC
Confidence 4889999999999999999883
No 128
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=93.64 E-value=0.026 Score=50.95 Aligned_cols=31 Identities=26% Similarity=0.214 Sum_probs=24.9
Q ss_pred eEEEEccCCChHHHHHHHHHHhc---CCCEEEEe
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEA---GVPFFSIS 322 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~---g~pf~~vs 322 (720)
-+-+.|++|+|||||+..++.++ |..+..+.
T Consensus 3 ii~I~G~~gSGKTTli~~l~~~L~~~g~~v~vik 36 (165)
T d1xjca_ 3 VWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVK 36 (165)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHhCCCeEEEEE
Confidence 35699999999999999998865 56666554
No 129
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.61 E-value=0.13 Score=48.25 Aligned_cols=49 Identities=27% Similarity=0.294 Sum_probs=28.8
Q ss_pred CccccccchHHHHHHHHHHHHhcCchhhhhccCc---CCceEEEEccCCChHHH
Q 005003 255 TFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGAR---IPKGVLLVGPPGTGKTL 305 (720)
Q Consensus 255 ~f~dI~G~de~k~eL~eiv~~l~~p~~~~~~g~~---~prgVLL~GPPGTGKT~ 305 (720)
+|+|+.-.++..+.|.+. -+..|...+...++ ..+.+++.+|+|+|||+
T Consensus 2 sF~~l~L~~~l~~~L~~~--g~~~pt~iQ~~aip~il~g~dvi~~a~tGsGKTl 53 (206)
T d1s2ma1 2 TFEDFYLKRELLMGIFEA--GFEKPSPIQEEAIPVAITGRDILARAKNGTGKTA 53 (206)
T ss_dssp CGGGGCCCHHHHHHHHHT--TCCSCCHHHHHHHHHHHHTCCEEEECCTTSCHHH
T ss_pred ChHHcCCCHHHHHHHHHC--CCCCCCHHHHHHHHHHHcCCCEEEecCCcchhhh
Confidence 577865555555555542 13333333322111 13579999999999994
No 130
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=93.54 E-value=0.048 Score=49.93 Aligned_cols=26 Identities=35% Similarity=0.442 Sum_probs=24.0
Q ss_pred eEEEEccCCChHHHHHHHHHHhcCCC
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEAGVP 317 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~g~p 317 (720)
-|+|.|+=|+|||+++|.+++.+|++
T Consensus 35 ii~L~G~LGaGKTtfvr~~~~~lg~~ 60 (158)
T d1htwa_ 35 MVYLNGDLGAGKTTLTRGMLQGIGHQ 60 (158)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHTTCC
T ss_pred EEEEecCCCccHHHHHHHHHhhcccc
Confidence 48899999999999999999999875
No 131
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=93.54 E-value=0.022 Score=53.23 Aligned_cols=29 Identities=31% Similarity=0.489 Sum_probs=24.3
Q ss_pred CceEEEEccCCChHHHHHHHHHHhcCCCEE
Q 005003 290 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFF 319 (720)
Q Consensus 290 prgVLL~GPPGTGKT~LArAlA~e~g~pf~ 319 (720)
.+||||.|++|+|||++|-++... |..++
T Consensus 14 g~gvl~~G~sG~GKStlal~l~~~-g~~lv 42 (176)
T d1kkma_ 14 GLGVLITGDSGVGKSETALELVQR-GHRLI 42 (176)
T ss_dssp TEEEEEECCTTSCHHHHHHHHHHT-TCEEE
T ss_pred CEEEEEEeCCCCCHHHHHHHHHHc-CCeEE
Confidence 358999999999999999998875 65554
No 132
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=93.44 E-value=0.21 Score=45.78 Aligned_cols=32 Identities=38% Similarity=0.510 Sum_probs=23.0
Q ss_pred eEEEEccCCChHHHHHHHHHH----hcCCCEEEEec
Q 005003 292 GVLLVGPPGTGKTLLAKAIAG----EAGVPFFSISG 323 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~----e~g~pf~~vs~ 323 (720)
++|+++|.|+|||.++-.++. ..+..++.+..
T Consensus 25 n~lv~~pTGsGKT~i~~~~~~~~~~~~~~~il~i~P 60 (200)
T d1wp9a1 25 NCLIVLPTGLGKTLIAMMIAEYRLTKYGGKVLMLAP 60 (200)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHHHHHSCSCEEEECS
T ss_pred CeEEEeCCCCcHHHHHHHHHHHHHHhcCCcEEEEcC
Confidence 588999999999986665554 33556666654
No 133
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.43 E-value=0.037 Score=55.48 Aligned_cols=42 Identities=24% Similarity=0.369 Sum_probs=32.1
Q ss_pred cCcCCceEEEEccCCChHHHHHHHHHHhc------CCCEEEEechhhH
Q 005003 286 GARIPKGVLLVGPPGTGKTLLAKAIAGEA------GVPFFSISGSEFV 327 (720)
Q Consensus 286 g~~~prgVLL~GPPGTGKT~LArAlA~e~------g~pf~~vs~s~~~ 327 (720)
+.+.|--|-|.|++|+||||+++.|...+ +..+..+|..+|.
T Consensus 23 ~~~~P~iIGi~G~qGSGKSTl~~~l~~~L~~~~~~~~~v~~iS~DdfY 70 (286)
T d1odfa_ 23 GNKCPLFIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDFY 70 (286)
T ss_dssp TCCSCEEEEEECCTTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGGB
T ss_pred CCCCCEEEEeECCCCCCHHHHHHHHHHHHHHHhCCCcceEeeccCCCC
Confidence 34456667789999999999999886654 4567778888874
No 134
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=93.41 E-value=0.018 Score=54.22 Aligned_cols=28 Identities=18% Similarity=0.130 Sum_probs=23.4
Q ss_pred CcCCceEEEEccCCChHHHHHHHHHHhc
Q 005003 287 ARIPKGVLLVGPPGTGKTLLAKAIAGEA 314 (720)
Q Consensus 287 ~~~prgVLL~GPPGTGKT~LArAlA~e~ 314 (720)
.+...-++|+|+||+|||+++..+|..+
T Consensus 31 l~~G~l~~i~G~~G~GKT~~~l~~a~~~ 58 (258)
T d2i1qa2 31 LESQSVTEFAGVFGSGKTQIMHQSCVNL 58 (258)
T ss_dssp EETTEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred ccCCeEEEEEeCCCCCHHHHHHHHHHHH
Confidence 4444568999999999999999998755
No 135
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=93.29 E-value=0.16 Score=45.54 Aligned_cols=22 Identities=36% Similarity=0.626 Sum_probs=19.4
Q ss_pred eEEEEccCCChHHHHHHHHHHh
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e 313 (720)
.|.|.|+||+|||+|.+++.++
T Consensus 2 ~V~liG~~n~GKSsLi~~L~~~ 23 (171)
T d1mkya1 2 TVLIVGRPNVGKSTLFNKLVKK 23 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHC-
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4899999999999999999753
No 136
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=93.26 E-value=0.07 Score=52.19 Aligned_cols=42 Identities=26% Similarity=0.468 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHhcCchhhhhccCcCCceEEEEccCCChHHHHHHHHHHh
Q 005003 265 AKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 265 ~k~eL~eiv~~l~~p~~~~~~g~~~prgVLL~GPPGTGKT~LArAlA~e 313 (720)
.+..+.++...++... ..+-.|+|.|.||+|||++..+|.++
T Consensus 14 ~~~~l~e~~~~l~~~~-------~~~l~I~LvG~tg~GKSSliN~ilg~ 55 (257)
T d1h65a_ 14 TQTKLLELLGNLKQED-------VNSLTILVMGKGGVGKSSTVNSIIGE 55 (257)
T ss_dssp HHHHHHHHHHHHHHTT-------CCEEEEEEEESTTSSHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHhhcC-------CCCcEEEEECCCCCcHHHHHHHHhCC
Confidence 4455666666654432 12346999999999999999999874
No 137
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=93.26 E-value=0.055 Score=49.15 Aligned_cols=22 Identities=36% Similarity=0.558 Sum_probs=20.1
Q ss_pred eEEEEccCCChHHHHHHHHHHh
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e 313 (720)
-|.|.|.||+|||+|.+++.+.
T Consensus 7 ~I~lvG~~~~GKSSLin~l~~~ 28 (178)
T d1wf3a1 7 FVAIVGKPNVGKSTLLNNLLGV 28 (178)
T ss_dssp EEEEECSTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4899999999999999999874
No 138
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.26 E-value=0.15 Score=46.80 Aligned_cols=23 Identities=26% Similarity=0.625 Sum_probs=20.9
Q ss_pred eEEEEccCCChHHHHHHHHHHhc
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEA 314 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~ 314 (720)
.|+|.|+||+|||+|..++.++-
T Consensus 5 ~V~lvG~~n~GKTSLln~l~~~~ 27 (209)
T d1nrjb_ 5 SIIIAGPQNSGKTSLLTLLTTDS 27 (209)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHhCCC
Confidence 59999999999999999998764
No 139
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=93.23 E-value=0.047 Score=51.32 Aligned_cols=34 Identities=32% Similarity=0.494 Sum_probs=26.7
Q ss_pred EEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHHH
Q 005003 293 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM 329 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~~ 329 (720)
|-|+|++|||||++|+.+. +.|++++ ++.++...
T Consensus 5 IgITG~igSGKStv~~~l~-~~G~~vi--daD~i~~~ 38 (205)
T d1jjva_ 5 VGLTGGIGSGKTTIANLFT-DLGVPLV--DADVVARE 38 (205)
T ss_dssp EEEECSTTSCHHHHHHHHH-TTTCCEE--EHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHH-HCCCeEE--EchHHHHH
Confidence 5689999999999999886 6798876 45555443
No 140
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.15 E-value=0.02 Score=51.73 Aligned_cols=21 Identities=29% Similarity=0.556 Sum_probs=19.5
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
|++.|++|+|||+|+..+.+.
T Consensus 6 i~viG~~~vGKTsli~~l~~~ 26 (166)
T d1ctqa_ 6 LVVVGAGGVGKSALTIQLIQN 26 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 899999999999999999874
No 141
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=93.00 E-value=0.051 Score=52.05 Aligned_cols=33 Identities=24% Similarity=0.293 Sum_probs=22.8
Q ss_pred ceEEEEccCCChHHHHHHHHHHh---cCCCEEEEec
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAGE---AGVPFFSISG 323 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~e---~g~pf~~vs~ 323 (720)
+.+++.+|+|+|||+.+-..+-. .+..++.+..
T Consensus 59 ~~~~i~apTGsGKT~~~~~~~~~~~~~~~rvliv~P 94 (237)
T d1gkub1 59 ESFAATAPTGVGKTSFGLAMSLFLALKGKRCYVIFP 94 (237)
T ss_dssp CCEECCCCBTSCSHHHHHHHHHHHHTTSCCEEEEES
T ss_pred CCEEEEecCCChHHHHHHHHHHHHHHhcCeEEEEec
Confidence 47999999999999766554432 2555666554
No 142
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.82 E-value=0.033 Score=52.91 Aligned_cols=30 Identities=17% Similarity=0.240 Sum_probs=24.5
Q ss_pred EEEEccCCChHHHHHHHHHHhc---CCCEEEEe
Q 005003 293 VLLVGPPGTGKTLLAKAIAGEA---GVPFFSIS 322 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e~---g~pf~~vs 322 (720)
|.|.|+.|+||||+++.|++.+ |.+++.+.
T Consensus 6 I~ieG~dGsGKsT~~~~L~~~L~~~g~~v~~~~ 38 (209)
T d1nn5a_ 6 IVLEGVDRAGKSTQSRKLVEALCAAGHRAELLR 38 (209)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEe
Confidence 5566999999999999998865 67777664
No 143
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=92.72 E-value=0.12 Score=46.09 Aligned_cols=22 Identities=36% Similarity=0.436 Sum_probs=19.7
Q ss_pred eEEEEccCCChHHHHHHHHHHh
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e 313 (720)
-|+|.|++|+|||+|...+...
T Consensus 4 ki~i~G~~~~GKTsLl~~l~~~ 25 (164)
T d1zd9a1 4 ELTLVGLQYSGKTTFVNVIASG 25 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 3889999999999999999764
No 144
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=92.68 E-value=0.03 Score=52.24 Aligned_cols=29 Identities=34% Similarity=0.468 Sum_probs=23.9
Q ss_pred CceEEEEccCCChHHHHHHHHHHhcCCCEE
Q 005003 290 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFF 319 (720)
Q Consensus 290 prgVLL~GPPGTGKT~LArAlA~e~g~pf~ 319 (720)
.+||||.||+|+|||++|-++... |..++
T Consensus 15 g~gvli~G~sG~GKS~lal~l~~~-G~~lv 43 (177)
T d1knxa2 15 GVGVLLTGRSGIGKSECALDLINK-NHLFV 43 (177)
T ss_dssp TEEEEEEESSSSSHHHHHHHHHTT-TCEEE
T ss_pred CEEEEEEcCCCCCHHHHHHHHHHc-CCcee
Confidence 358999999999999999998764 55544
No 145
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=92.63 E-value=0.048 Score=49.33 Aligned_cols=22 Identities=23% Similarity=0.345 Sum_probs=19.8
Q ss_pred eEEEEccCCChHHHHHHHHHHh
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e 313 (720)
-|++.|+||+|||+|.+.+...
T Consensus 14 kIvlvG~~~vGKTSli~rl~~~ 35 (173)
T d1e0sa_ 14 RILMLGLDAAGKTTILYKLKLG 35 (173)
T ss_dssp EEEEEEETTSSHHHHHHHTTCC
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 4999999999999999999753
No 146
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=92.51 E-value=0.037 Score=51.26 Aligned_cols=29 Identities=31% Similarity=0.465 Sum_probs=23.4
Q ss_pred CceEEEEccCCChHHHHHHHHHHhcCCCEE
Q 005003 290 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFF 319 (720)
Q Consensus 290 prgVLL~GPPGTGKT~LArAlA~e~g~pf~ 319 (720)
.+||||.|++|+|||++|-++... |..++
T Consensus 15 g~gvli~G~sg~GKS~la~~l~~~-g~~li 43 (169)
T d1ko7a2 15 GVGVLITGDSGIGKSETALELIKR-GHRLV 43 (169)
T ss_dssp TEEEEEEESTTSSHHHHHHHHHHT-TCEEE
T ss_pred CEEEEEEeCCCCCHHHHHHHHHHc-CCeEE
Confidence 358999999999999999888776 44333
No 147
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.12 E-value=0.35 Score=46.00 Aligned_cols=52 Identities=21% Similarity=0.245 Sum_probs=32.5
Q ss_pred CCCCccccccchHHHHHHHHHHHHhcCchhhhhccC---cCCceEEEEccCCChHHH
Q 005003 252 TGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGA---RIPKGVLLVGPPGTGKTL 305 (720)
Q Consensus 252 ~~~~f~dI~G~de~k~eL~eiv~~l~~p~~~~~~g~---~~prgVLL~GPPGTGKT~ 305 (720)
...+|+|+.-.++..+.|.+. -+..|...+...+ -..+.++...|+|||||+
T Consensus 15 ~~~sF~~l~L~~~l~~~L~~~--g~~~pt~IQ~~aIp~il~g~dvi~~a~TGSGKTl 69 (222)
T d2j0sa1 15 VTPTFDTMGLREDLLRGIYAY--GFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTA 69 (222)
T ss_dssp CCCSGGGGCCCHHHHHHHHHH--TCCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHH
T ss_pred CCCCHHHCCCCHHHHHHHHHC--CCCCCCHHHHHHHHHHHCCCCeEEEcCcchhhhh
Confidence 345899996555566655542 2444443333221 123679999999999995
No 148
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.90 E-value=0.26 Score=44.61 Aligned_cols=21 Identities=29% Similarity=0.466 Sum_probs=19.2
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
|++.|+||+|||+|++.+.+.
T Consensus 8 i~ivG~~~vGKTsLi~~l~~~ 28 (186)
T d2f7sa1 8 LLALGDSGVGKTTFLYRYTDN 28 (186)
T ss_dssp EEEESCTTSSHHHHHHHHHCS
T ss_pred EEEECCCCcCHHHHHHHHhcC
Confidence 899999999999999999863
No 149
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=91.90 E-value=0.046 Score=51.82 Aligned_cols=24 Identities=25% Similarity=0.400 Sum_probs=21.3
Q ss_pred eEEEEccCCChHHHHHHHHHHhcC
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEAG 315 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~g 315 (720)
-++|+||+|+|||+|.+.+..+..
T Consensus 4 livi~GPSG~GK~tl~~~L~~~~p 27 (205)
T d1s96a_ 4 LYIVSAPSGAGKSSLIQALLKTQP 27 (205)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHhhCC
Confidence 488999999999999999988753
No 150
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=91.84 E-value=0.089 Score=47.29 Aligned_cols=22 Identities=45% Similarity=0.644 Sum_probs=19.7
Q ss_pred eEEEEccCCChHHHHHHHHHHh
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e 313 (720)
-|++.|+||+|||+|...+.+.
T Consensus 18 kI~vvG~~~vGKSsLi~~l~~~ 39 (176)
T d1fzqa_ 18 RILLLGLDNAGKTTLLKQLASE 39 (176)
T ss_dssp EEEEEESTTSSHHHHHHHHCCS
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 4999999999999999999653
No 151
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.71 E-value=0.073 Score=47.71 Aligned_cols=21 Identities=24% Similarity=0.520 Sum_probs=19.3
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
|+|.|.||+|||+|++.+.+.
T Consensus 7 ivlvG~~~vGKTsli~~~~~~ 27 (166)
T d1z0fa1 7 YIIIGDMGVGKSCLLHQFTEK 27 (166)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999999863
No 152
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=91.68 E-value=0.28 Score=45.94 Aligned_cols=56 Identities=14% Similarity=0.115 Sum_probs=30.9
Q ss_pred CCccccccchHHHHHHHHHHHHhcCchhhhhccCc----CCceEEEEccCCChHHHHHHHHH
Q 005003 254 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGAR----IPKGVLLVGPPGTGKTLLAKAIA 311 (720)
Q Consensus 254 ~~f~dI~G~de~k~eL~eiv~~l~~p~~~~~~g~~----~prgVLL~GPPGTGKT~LArAlA 311 (720)
.+|+|+.=.++..+.+.+. .+..|...+...++ -.+.+++..|+|+|||+.+-...
T Consensus 4 msf~~l~l~~~l~~~l~~~--g~~~pt~iQ~~~ip~~l~g~~d~iv~a~TGsGKT~~~~l~~ 63 (208)
T d1hv8a1 4 MNFNELNLSDNILNAIRNK--GFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFAIPL 63 (208)
T ss_dssp CCGGGSSCCHHHHHHHHHH--TCCSCCHHHHHHHHHHHHTCSEEEEECCSSSSHHHHHHHHH
T ss_pred cCHHHcCCCHHHHHHHHHC--CCCCCCHHHHHHHHHHHcCCCCeeeechhcccccceeeccc
Confidence 3788874334444444321 13334333322111 12379999999999998665544
No 153
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.64 E-value=0.044 Score=47.83 Aligned_cols=21 Identities=29% Similarity=0.531 Sum_probs=19.6
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
|+|.|+||+|||+|...+.+.
T Consensus 3 I~liG~~nvGKSSLln~l~~~ 23 (166)
T d2qtvb1 3 LLFLGLDNAGKTTLLHMLKND 23 (166)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 899999999999999999874
No 154
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.50 E-value=0.07 Score=48.10 Aligned_cols=21 Identities=52% Similarity=0.934 Sum_probs=19.1
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
|++.|++|+|||+|++.+.+.
T Consensus 4 i~lvG~~~vGKTsLi~~~~~~ 24 (168)
T d2gjsa1 4 VLLLGAPGVGKSALARIFGGV 24 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHTC
T ss_pred EEEECCCCcCHHHHHHHHhCC
Confidence 789999999999999999764
No 155
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.41 E-value=0.14 Score=48.67 Aligned_cols=52 Identities=21% Similarity=0.202 Sum_probs=32.8
Q ss_pred CCccccccchHHHHHHHHHHHHhcCchhhhhccCc---CCceEEEEccCCChHHHHH
Q 005003 254 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGAR---IPKGVLLVGPPGTGKTLLA 307 (720)
Q Consensus 254 ~~f~dI~G~de~k~eL~eiv~~l~~p~~~~~~g~~---~prgVLL~GPPGTGKT~LA 307 (720)
.+|+|+.-.+...+.+.+. .+..|...+...++ ..+.+++..|+|||||+..
T Consensus 12 ~sF~~l~L~~~l~~~L~~~--g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKTlay 66 (218)
T d2g9na1 12 DSFDDMNLSESLLRGIYAY--GFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATF 66 (218)
T ss_dssp CCGGGSCCCHHHHHHHHHH--TCCSCCHHHHHHHHHHHHTCCEEEECCTTSSHHHHH
T ss_pred CCHHHCCCCHHHHHHHHHC--CCCCCCHHHHHHHHHHHcCCCEEEEcccchhhhhhh
Confidence 4799986555555555432 24555544443222 2357999999999999643
No 156
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=91.39 E-value=0.042 Score=50.65 Aligned_cols=31 Identities=26% Similarity=0.254 Sum_probs=25.8
Q ss_pred CCceEEEEccCCChHHHHHHHHHHhcCCCEE
Q 005003 289 IPKGVLLVGPPGTGKTLLAKAIAGEAGVPFF 319 (720)
Q Consensus 289 ~prgVLL~GPPGTGKT~LArAlA~e~g~pf~ 319 (720)
-|.-|.|.|+.|+||||+++.|+++++...+
T Consensus 8 kp~~I~ieG~~GsGKTTl~~~L~~~l~~~~~ 38 (197)
T d2vp4a1 8 QPFTVLIEGNIGSGKTTYLNHFEKYKNDICL 38 (197)
T ss_dssp CCEEEEEECSTTSCHHHHHHTTGGGTTTEEE
T ss_pred CceEEEEECCCCCCHHHHHHHHHHHhCCcEE
Confidence 3556889999999999999999999865443
No 157
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=91.38 E-value=0.052 Score=51.18 Aligned_cols=36 Identities=28% Similarity=0.407 Sum_probs=27.2
Q ss_pred eEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHHHH
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMF 330 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~~~ 330 (720)
-|-|+|++|+|||++++.+. +.|++++ ++..+....
T Consensus 5 iIgitG~igSGKStv~~~l~-~~G~~vi--daD~i~~~l 40 (208)
T d1vhta_ 5 IVALTGGIGSGKSTVANAFA-DLGINVI--DADIIARQV 40 (208)
T ss_dssp EEEEECCTTSCHHHHHHHHH-HTTCEEE--EHHHHHHHT
T ss_pred EEEEECCCcCCHHHHHHHHH-HCCCcEE--EchHHHHHH
Confidence 36689999999999999886 6787655 555555443
No 158
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=91.27 E-value=0.27 Score=49.79 Aligned_cols=23 Identities=26% Similarity=0.408 Sum_probs=20.2
Q ss_pred eEEEEccCCChHHHHHHHHHHhc
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEA 314 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~ 314 (720)
-|-++||||+|||+|..+++...
T Consensus 56 ~IgitG~pGaGKSTLi~~l~~~~ 78 (327)
T d2p67a1 56 RLGVTGTPGAGKSTFLEAFGMLL 78 (327)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHH
T ss_pred EEEeeCCCCCCHHHHHHHHHHHH
Confidence 48899999999999999998643
No 159
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=91.23 E-value=0.078 Score=49.09 Aligned_cols=31 Identities=23% Similarity=0.415 Sum_probs=25.9
Q ss_pred EEEEccCCChHHHHHHHHHHhc---CCCEEEEec
Q 005003 293 VLLVGPPGTGKTLLAKAIAGEA---GVPFFSISG 323 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e~---g~pf~~vs~ 323 (720)
|.|.|+.|+||||+++.|++.+ |.+++.+..
T Consensus 3 I~ieG~dGsGKST~~~~L~~~l~~~g~~v~~~~~ 36 (208)
T d1gsia_ 3 IAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAF 36 (208)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEES
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEec
Confidence 6788999999999999999864 777777643
No 160
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=91.22 E-value=0.051 Score=47.84 Aligned_cols=22 Identities=27% Similarity=0.454 Sum_probs=20.0
Q ss_pred eEEEEccCCChHHHHHHHHHHh
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e 313 (720)
-|+|.|.||+|||+|.+++.+.
T Consensus 7 kI~ivG~~~vGKSSLi~~~~~~ 28 (169)
T d1upta_ 7 RILILGLDGAGKTTILYRLQVG 28 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 3899999999999999999774
No 161
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=91.21 E-value=0.05 Score=51.41 Aligned_cols=29 Identities=28% Similarity=0.398 Sum_probs=22.5
Q ss_pred EEEEccCCChHHHHHHHHHHhc--CCCEEEE
Q 005003 293 VLLVGPPGTGKTLLAKAIAGEA--GVPFFSI 321 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e~--g~pf~~v 321 (720)
+++.||+|+|||||.+++...+ +.....+
T Consensus 3 i~v~G~~GsGKTTLl~~ll~~~~~~~~~~iv 33 (244)
T d1yrba1 3 VVFVGTAGSGKTTLTGEFGRYLEDNYKVAYV 33 (244)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHTTTSCEEEE
T ss_pred EEEEcCCCCcHHHHHHHHHHHHhhCCeEEEE
Confidence 7899999999999999997644 3344444
No 162
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=91.10 E-value=0.045 Score=52.84 Aligned_cols=21 Identities=38% Similarity=0.555 Sum_probs=18.6
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
.+|+||.|+|||++..||+-.
T Consensus 26 n~IvG~NGsGKStiL~Ai~~~ 46 (292)
T g1f2t.1 26 NLIIGQNGSGKSSLLDAILVG 46 (292)
T ss_dssp EEEECCTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHH
Confidence 389999999999999999743
No 163
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=91.09 E-value=0.052 Score=49.08 Aligned_cols=21 Identities=33% Similarity=0.569 Sum_probs=19.3
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
|+|.|.+|+|||+|++.+...
T Consensus 7 ivlvG~~~vGKTsli~~~~~~ 27 (168)
T d1u8za_ 7 VIMVGSGGVGKSALTLQFMYD 27 (168)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999998763
No 164
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=90.47 E-value=0.047 Score=48.80 Aligned_cols=22 Identities=36% Similarity=0.611 Sum_probs=19.9
Q ss_pred eEEEEccCCChHHHHHHHHHHh
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e 313 (720)
-|++.|+||+|||+|.+.+.+.
T Consensus 4 ki~ivG~~~~GKTsLi~~l~~~ 25 (165)
T d1ksha_ 4 RLLMLGLDNAGKTTILKKFNGE 25 (165)
T ss_dssp EEEEECSTTSSHHHHHHHHTTC
T ss_pred EEEEECCCCCCHHHHHHHHcCC
Confidence 3899999999999999999764
No 165
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=90.30 E-value=0.062 Score=52.56 Aligned_cols=17 Identities=29% Similarity=0.458 Sum_probs=14.3
Q ss_pred ceEEEEccCCChHHHHH
Q 005003 291 KGVLLVGPPGTGKTLLA 307 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LA 307 (720)
.++|+.|+||||||+++
T Consensus 15 ~~~lI~g~aGTGKTt~l 31 (306)
T d1uaaa1 15 GPCLVLAGAGSGKTRVI 31 (306)
T ss_dssp SEEEECCCTTSCHHHHH
T ss_pred CCEEEEeeCCccHHHHH
Confidence 36899999999999753
No 166
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=90.23 E-value=0.056 Score=48.40 Aligned_cols=22 Identities=23% Similarity=0.453 Sum_probs=19.5
Q ss_pred eEEEEccCCChHHHHHHHHHHh
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e 313 (720)
-|+|.|+||+|||+|..++.+.
T Consensus 15 kI~lvG~~~vGKTsLl~~l~~~ 36 (186)
T d1f6ba_ 15 KLVFLGLDNAGKTTLLHMLKDD 36 (186)
T ss_dssp EEEEEEETTSSHHHHHHHHSCC
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 3999999999999999999653
No 167
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.06 E-value=0.073 Score=48.14 Aligned_cols=21 Identities=24% Similarity=0.531 Sum_probs=19.2
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
|++.|+||+|||+|+..+.+.
T Consensus 6 ivvvG~~~vGKTsli~r~~~~ 26 (173)
T d2a5ja1 6 YIIIGDTGVGKSCLLLQFTDK 26 (173)
T ss_dssp EEEESSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHhcC
Confidence 889999999999999998764
No 168
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.06 E-value=0.11 Score=49.34 Aligned_cols=29 Identities=17% Similarity=0.220 Sum_probs=25.4
Q ss_pred CceEEEEccCCChHHHHHHHHHHhcCCCE
Q 005003 290 PKGVLLVGPPGTGKTLLAKAIAGEAGVPF 318 (720)
Q Consensus 290 prgVLL~GPPGTGKT~LArAlA~e~g~pf 318 (720)
|+=|.+.|+-|+||||+++.|+..++.-.
T Consensus 2 pk~IviEG~~GsGKST~~~~L~~~l~~~~ 30 (241)
T d2ocpa1 2 PRRLSIEGNIAVGKSTFVKLLTKTYPEWH 30 (241)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHCTTSE
T ss_pred CeEEEEECCCCCcHHHHHHHHHHHHhhcC
Confidence 67799999999999999999999886443
No 169
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=90.02 E-value=0.064 Score=52.35 Aligned_cols=22 Identities=41% Similarity=0.809 Sum_probs=19.6
Q ss_pred EEEEccCCChHHHHHHHHHHhc
Q 005003 293 VLLVGPPGTGKTLLAKAIAGEA 314 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e~ 314 (720)
+.|.||+|+|||||.+.+++-.
T Consensus 27 ~~liGpnGaGKSTll~~i~Gl~ 48 (240)
T d2onka1 27 CVLLGPTGAGKSVFLELIAGIV 48 (240)
T ss_dssp EEEECCTTSSHHHHHHHHHTSS
T ss_pred EEEECCCCChHHHHHHHHHcCC
Confidence 4588999999999999999865
No 170
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=89.93 E-value=0.4 Score=48.38 Aligned_cols=33 Identities=27% Similarity=0.408 Sum_probs=24.7
Q ss_pred eEEEEccCCChHHHHHHHHHHhc-----CCCEEEEech
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEA-----GVPFFSISGS 324 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~-----g~pf~~vs~s 324 (720)
-|=|.||||+|||+|..+++... .+-++.++.+
T Consensus 53 ~igitG~pGaGKSTli~~l~~~~~~~g~~vaViavDps 90 (323)
T d2qm8a1 53 RVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPS 90 (323)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEECGG
T ss_pred EEeeeCCCCCCHHHHHHHHHHHHhhcCCceeeeecccc
Confidence 47899999999999999998643 3345555543
No 171
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=89.81 E-value=0.14 Score=49.86 Aligned_cols=36 Identities=31% Similarity=0.395 Sum_probs=27.6
Q ss_pred cCCceEEEEccCCChHHHHHHHHHHhc---CCCEEEEec
Q 005003 288 RIPKGVLLVGPPGTGKTLLAKAIAGEA---GVPFFSISG 323 (720)
Q Consensus 288 ~~prgVLL~GPPGTGKT~LArAlA~e~---g~pf~~vs~ 323 (720)
.+|+-++++|.=|+||||+|-++|..+ |..+..+++
T Consensus 6 ~~p~~i~~sGKGGVGKTTvaa~lA~~lA~~G~rVLlvD~ 44 (296)
T d1ihua1 6 NIPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVST 44 (296)
T ss_dssp SCCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCeEEEEECCCcChHHHHHHHHHHHHHHCCCCEEEEeC
Confidence 458889999999999999999988754 444444443
No 172
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=89.75 E-value=0.11 Score=46.39 Aligned_cols=22 Identities=27% Similarity=0.391 Sum_probs=20.1
Q ss_pred eEEEEccCCChHHHHHHHHHHh
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e 313 (720)
-|++.|.||+|||+|..++.+.
T Consensus 17 kI~vvG~~~~GKSsLi~rl~~~ 38 (177)
T d1zj6a1 17 KVIIVGLDNAGKTTILYQFSMN 38 (177)
T ss_dssp EEEEEESTTSSHHHHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHhcC
Confidence 4999999999999999999774
No 173
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=89.75 E-value=0.069 Score=53.46 Aligned_cols=36 Identities=25% Similarity=0.397 Sum_probs=27.6
Q ss_pred eEEEEccCCChHHHHHHHHHHhc---CCCEEEEechhhH
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEA---GVPFFSISGSEFV 327 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~---g~pf~~vs~s~~~ 327 (720)
-|-++|++|+|||++++++++.+ +++...+++.+|.
T Consensus 6 IIgIaG~SGSGKTTva~~l~~i~~~~~v~~~iI~~Dsfy 44 (288)
T d1a7ja_ 6 IISVTGSSGAGTSTVKHTFDQIFRREGVKAVSIEGDAFH 44 (288)
T ss_dssp EEEEESCC---CCTHHHHHHHHHHHHTCCEEEEEGGGGB
T ss_pred EEEEECCCCCcHHHHHHHHHHHHhhcCCCeEEEeCCCCC
Confidence 48899999999999999998754 6788888888874
No 174
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=89.58 E-value=0.07 Score=50.88 Aligned_cols=32 Identities=19% Similarity=0.155 Sum_probs=25.9
Q ss_pred eEEEEccCCChHHHHHHHHHHhcCCCEEEEechh
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSE 325 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~ 325 (720)
-|-|+|+.||||||+|+.+++..|+ ..+++++
T Consensus 3 iIgiTG~igSGKsTva~~l~e~~g~--~~i~~aD 34 (241)
T d1deka_ 3 LIFLSGVKRSGKDTTADFIMSNYSA--VKYQLAG 34 (241)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHSCE--EECCTTH
T ss_pred EEEEECCCCCCHHHHHHHHHHhCCC--eEEcccH
Confidence 3779999999999999999998774 4555444
No 175
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.27 E-value=0.092 Score=46.91 Aligned_cols=20 Identities=20% Similarity=0.401 Sum_probs=18.8
Q ss_pred EEEEccCCChHHHHHHHHHH
Q 005003 293 VLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~ 312 (720)
|+|.|+||+|||+|+..+.+
T Consensus 5 v~liG~~~vGKSsLi~rl~~ 24 (164)
T d1z2aa1 5 MVVVGNGAVGKSSMIQRYCK 24 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 89999999999999999876
No 176
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=89.17 E-value=0.072 Score=48.13 Aligned_cols=22 Identities=23% Similarity=0.533 Sum_probs=19.9
Q ss_pred eEEEEccCCChHHHHHHHHHHh
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e 313 (720)
.|+|.|+||+|||+|..++.++
T Consensus 2 ~I~lvG~~nvGKSsLin~l~~~ 23 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLTGK 23 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4899999999999999999763
No 177
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=89.12 E-value=0.12 Score=50.95 Aligned_cols=27 Identities=41% Similarity=0.529 Sum_probs=24.0
Q ss_pred CceEEEEccCCChHHHHHHHHHHhcCC
Q 005003 290 PKGVLLVGPPGTGKTLLAKAIAGEAGV 316 (720)
Q Consensus 290 prgVLL~GPPGTGKT~LArAlA~e~g~ 316 (720)
-+.++|+|||+||||+++.+++.-+|.
T Consensus 104 ~n~~~l~G~~~tGKS~f~~~i~~~lg~ 130 (267)
T d1u0ja_ 104 RNTIWLFGPATTGKTNIAEAIAHTVPF 130 (267)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHSSC
T ss_pred cEEEEEEcCCCCCHHHHHHHHHHHhcc
Confidence 347899999999999999999998864
No 178
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=89.10 E-value=0.07 Score=52.80 Aligned_cols=16 Identities=31% Similarity=0.555 Sum_probs=14.0
Q ss_pred eEEEEccCCChHHHHH
Q 005003 292 GVLLVGPPGTGKTLLA 307 (720)
Q Consensus 292 gVLL~GPPGTGKT~LA 307 (720)
++++.|+||||||+.+
T Consensus 26 ~~lV~g~aGSGKTt~l 41 (318)
T d1pjra1 26 PLLIMAGAGSGKTRVL 41 (318)
T ss_dssp CEEEEECTTSCHHHHH
T ss_pred CEEEEecCCccHHHHH
Confidence 5999999999999654
No 179
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=89.09 E-value=0.38 Score=42.54 Aligned_cols=69 Identities=16% Similarity=0.256 Sum_probs=40.5
Q ss_pred EEEEccCCChHHH-HHHHH--HHhcCCCEEEEech-hhHH-----HHhhh-----chHHHHHHHHHHHh----cCCeEEE
Q 005003 293 VLLVGPPGTGKTL-LAKAI--AGEAGVPFFSISGS-EFVE-----MFVGV-----GASRVRDLFKKAKE----NAPCIVF 354 (720)
Q Consensus 293 VLL~GPPGTGKT~-LArAl--A~e~g~pf~~vs~s-~~~~-----~~~G~-----~~~~vr~lF~~A~~----~~P~ILf 354 (720)
=+++||-.+|||+ |.+.+ ....+.+++.+..+ +-.. ...|. ......+++..... ....+|+
T Consensus 5 ~~i~GpMfsGKTteLi~~~~~~~~~~~kv~~ikp~~D~R~~~~i~s~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~dvI~ 84 (139)
T d2b8ta1 5 EFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPKIDTRSIRNIQSRTGTSLPSVEVESAPEILNYIMSNSFNDETKVIG 84 (139)
T ss_dssp EEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEECCCGGGCSSCCCCCCCSSCCEEESSTHHHHHHHHSTTSCTTCCEEE
T ss_pred EEEEccccCHHHHHHHHHHHHHHHCCCcEEEEEEcccccccceEEcccCceeeeEEeccchhhHHHHHhhccccCcCEEE
Confidence 3789999999998 77766 44567777776543 1110 00111 01112334443322 2467999
Q ss_pred Eccchhc
Q 005003 355 VDEIDAV 361 (720)
Q Consensus 355 IDEID~l 361 (720)
|||++-+
T Consensus 85 IDE~QFf 91 (139)
T d2b8ta1 85 IDEVQFF 91 (139)
T ss_dssp ECSGGGS
T ss_pred echhhhc
Confidence 9999987
No 180
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=88.98 E-value=0.09 Score=49.15 Aligned_cols=23 Identities=22% Similarity=0.349 Sum_probs=20.4
Q ss_pred eEEEEccCCChHHHHHHHHHHhc
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEA 314 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~ 314 (720)
=|.+.|++|+||||+++.+++.+
T Consensus 4 fIviEG~dGsGKsT~~~~L~~~L 26 (210)
T d4tmka_ 4 YIVIEGLEGAGKTTARNVVVETL 26 (210)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 37788999999999999998865
No 181
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.89 E-value=0.1 Score=46.69 Aligned_cols=21 Identities=29% Similarity=0.521 Sum_probs=19.5
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
|+|.|++|+|||+|+..+.+.
T Consensus 6 i~lvG~~~vGKTsLi~r~~~~ 26 (167)
T d1kaoa_ 6 VVVLGSGGVGKSALTVQFVTG 26 (167)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999999874
No 182
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=88.82 E-value=0.085 Score=52.56 Aligned_cols=34 Identities=38% Similarity=0.563 Sum_probs=26.4
Q ss_pred hhhhccCcCCce--EEEEccCCChHHHHHHHHHHhc
Q 005003 281 RFTAIGARIPKG--VLLVGPPGTGKTLLAKAIAGEA 314 (720)
Q Consensus 281 ~~~~~g~~~prg--VLL~GPPGTGKT~LArAlA~e~ 314 (720)
.++.+...+++| +.|.||+|+|||||++.+++..
T Consensus 51 vL~~isl~i~~Ge~vaivG~nGsGKSTLl~~i~Gl~ 86 (281)
T d1r0wa_ 51 VLKNINLNIEKGEMLAITGSTGSGKTSLLMLILGEL 86 (281)
T ss_dssp EEEEEEEEECTTCEEEEEESTTSSHHHHHHHHHTSS
T ss_pred EEeCeEEEEcCCCEEEEECCCCChHHHHHHHHhCCC
Confidence 344555555554 8899999999999999999855
No 183
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=88.68 E-value=0.11 Score=46.77 Aligned_cols=21 Identities=29% Similarity=0.494 Sum_probs=19.4
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
|++.|++|+|||+|.+.+.+.
T Consensus 8 i~vvG~~~vGKTsLi~~l~~~ 28 (169)
T d3raba_ 8 ILIIGNSSVGKTSFLFRYADD 28 (169)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHcC
Confidence 899999999999999999764
No 184
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.61 E-value=0.1 Score=46.89 Aligned_cols=20 Identities=35% Similarity=0.703 Sum_probs=19.1
Q ss_pred EEEEccCCChHHHHHHHHHH
Q 005003 293 VLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~ 312 (720)
|+|.|++|+|||+|.+.+.+
T Consensus 8 i~lvG~~~vGKTsLi~~l~~ 27 (171)
T d2ew1a1 8 IVLIGNAGVGKTCLVRRFTQ 27 (171)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 89999999999999999986
No 185
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.06 E-value=0.12 Score=46.35 Aligned_cols=21 Identities=24% Similarity=0.444 Sum_probs=19.4
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
|++.|++|+|||+|.+.+...
T Consensus 5 i~lvG~~~vGKTsli~r~~~~ 25 (168)
T d2atva1 5 LAIFGRAGVGKSALVVRFLTK 25 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 899999999999999999874
No 186
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.04 E-value=0.12 Score=46.61 Aligned_cols=20 Identities=35% Similarity=0.607 Sum_probs=18.9
Q ss_pred EEEEccCCChHHHHHHHHHH
Q 005003 293 VLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~ 312 (720)
|++.|+||+|||+|++.+.+
T Consensus 7 i~vvG~~~vGKTsLi~~~~~ 26 (175)
T d2f9la1 7 VVLIGDSGVGKSNLLSRFTR 26 (175)
T ss_dssp EEEESSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 89999999999999999876
No 187
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=87.80 E-value=0.53 Score=42.31 Aligned_cols=20 Identities=40% Similarity=0.581 Sum_probs=18.5
Q ss_pred EEEEccCCChHHHHHHHHHH
Q 005003 293 VLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~ 312 (720)
|-|.|+|++|||+|..++.+
T Consensus 4 VaiiG~~nvGKSSLin~L~~ 23 (185)
T d1lnza2 4 VGLVGFPSVGKSTLLSVVSS 23 (185)
T ss_dssp EEEESSTTSSHHHHHHHSEE
T ss_pred EEEECCCCCCHHHHHHHHhC
Confidence 78999999999999999955
No 188
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=87.73 E-value=0.096 Score=51.52 Aligned_cols=23 Identities=22% Similarity=0.419 Sum_probs=20.4
Q ss_pred eEEEEccCCChHHHHHHHHHHhc
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEA 314 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~ 314 (720)
-+-|.||+|+|||+|++++++-.
T Consensus 30 i~~iiG~sGsGKSTLl~~i~Gl~ 52 (258)
T d1b0ua_ 30 VISIIGSSGSGKSTFLRCINFLE 52 (258)
T ss_dssp EEEEECCTTSSHHHHHHHHTTSS
T ss_pred EEEEECCCCCcHHHHHHHHHcCc
Confidence 48899999999999999998743
No 189
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=87.71 E-value=0.11 Score=47.80 Aligned_cols=21 Identities=19% Similarity=0.439 Sum_probs=19.4
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
|.|.|+||+|||+|..++.++
T Consensus 26 I~lvG~~n~GKSTLin~L~g~ 46 (195)
T d1svia_ 26 IALAGRSNVGKSSFINSLINR 46 (195)
T ss_dssp EEEEEBTTSSHHHHHHHHHTC
T ss_pred EEEECCCCCCHHHHHHHhcCC
Confidence 999999999999999999753
No 190
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.67 E-value=0.13 Score=46.23 Aligned_cols=20 Identities=30% Similarity=0.507 Sum_probs=19.0
Q ss_pred EEEEccCCChHHHHHHHHHH
Q 005003 293 VLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~ 312 (720)
|+|.|.||+|||+|.+.+..
T Consensus 8 i~lvG~~~vGKTsLi~r~~~ 27 (171)
T d2erya1 8 LVVVGGGGVGKSALTIQFIQ 27 (171)
T ss_dssp EEEEECTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHh
Confidence 99999999999999999876
No 191
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.66 E-value=0.14 Score=46.03 Aligned_cols=21 Identities=24% Similarity=0.417 Sum_probs=19.3
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
|++.|.+|+|||+|+..+.+.
T Consensus 9 i~vvG~~~vGKTsLi~~l~~~ 29 (170)
T d1r2qa_ 9 LVLLGESAVGKSSLVLRFVKG 29 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999999863
No 192
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.65 E-value=0.13 Score=45.92 Aligned_cols=20 Identities=35% Similarity=0.403 Sum_probs=18.9
Q ss_pred EEEEccCCChHHHHHHHHHH
Q 005003 293 VLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~ 312 (720)
|+|.|.+|+|||+|++.+.+
T Consensus 6 ivlvG~~~vGKTsLi~r~~~ 25 (167)
T d1z08a1 6 VVLLGEGCVGKTSLVLRYCE 25 (167)
T ss_dssp EEEECCTTSCHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 89999999999999999976
No 193
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=87.58 E-value=0.14 Score=46.00 Aligned_cols=20 Identities=35% Similarity=0.617 Sum_probs=18.8
Q ss_pred EEEEccCCChHHHHHHHHHH
Q 005003 293 VLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~ 312 (720)
|++.|+||+|||+|...+.+
T Consensus 5 i~~vG~~~vGKSsLi~~~~~ 24 (175)
T d1ky3a_ 5 VIILGDSGVGKTSLMHRYVN 24 (175)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHc
Confidence 89999999999999999876
No 194
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=87.50 E-value=0.13 Score=45.77 Aligned_cols=21 Identities=33% Similarity=0.642 Sum_probs=19.3
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
|++.|+||+|||+|++.+.+.
T Consensus 5 i~vvG~~~vGKTSli~~l~~~ 25 (166)
T d1g16a_ 5 ILLIGDSGVGKSCLLVRFVED 25 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 889999999999999999764
No 195
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=87.38 E-value=0.22 Score=46.95 Aligned_cols=31 Identities=19% Similarity=0.121 Sum_probs=25.8
Q ss_pred eEEEEccCCChHHHHHHHHHHhcCCCEEEEe
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEAGVPFFSIS 322 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~g~pf~~vs 322 (720)
=|.+.|+-|+||||+++.|+..+......++
T Consensus 5 ~I~iEG~DGsGKST~~~~L~~~L~~~~~~~~ 35 (214)
T d1tmka_ 5 LILIEGLDRTGKTTQCNILYKKLQPNCKLLK 35 (214)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHTTTSEEEEE
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHhCCEEEE
Confidence 3778899999999999999999866655554
No 196
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=87.32 E-value=0.12 Score=50.37 Aligned_cols=21 Identities=38% Similarity=0.496 Sum_probs=18.6
Q ss_pred eEEEEccCCChHHHHHHHHHH
Q 005003 292 GVLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~ 312 (720)
-.+|+||.|+|||++.+||+-
T Consensus 25 ~~vi~G~NgsGKTtileAI~~ 45 (369)
T g1ii8.1 25 INLIIGQNGSGKSSLLDAILV 45 (369)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHH
Confidence 468999999999999999964
No 197
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=87.30 E-value=0.15 Score=45.31 Aligned_cols=20 Identities=25% Similarity=0.537 Sum_probs=19.0
Q ss_pred EEEEccCCChHHHHHHHHHH
Q 005003 293 VLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~ 312 (720)
|++.|++|+|||+|++.+..
T Consensus 5 v~liG~~~vGKTsLl~~~~~ 24 (165)
T d1z06a1 5 IIVIGDSNVGKTCLTYRFCA 24 (165)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 89999999999999999986
No 198
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.27 E-value=0.13 Score=46.00 Aligned_cols=21 Identities=29% Similarity=0.411 Sum_probs=19.1
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
|++.|.+|+|||+|...+.+.
T Consensus 5 i~viG~~~vGKTsLi~r~~~~ 25 (171)
T d2erxa1 5 VAVFGAGGVGKSSLVLRFVKG 25 (171)
T ss_dssp EEEECCTTSSHHHHHHHHHTC
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 889999999999999998763
No 199
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=87.22 E-value=0.15 Score=46.42 Aligned_cols=21 Identities=33% Similarity=0.616 Sum_probs=19.3
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
|++.|.||+|||+|+..+.+.
T Consensus 5 v~vvG~~~vGKSSLi~~l~~~ 25 (184)
T d1vg8a_ 5 VIILGDSGVGKTSLMNQYVNK 25 (184)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999999863
No 200
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=87.06 E-value=0.18 Score=52.15 Aligned_cols=34 Identities=26% Similarity=0.467 Sum_probs=27.7
Q ss_pred ceEEEEccCCChHHHHHHHHHHh---cCCCEEEEech
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAGE---AGVPFFSISGS 324 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~e---~g~pf~~vs~s 324 (720)
+++++.|++|+|||.+++.+..+ .+.+++.++..
T Consensus 51 ~H~~I~G~tGsGKT~~l~~li~~~~~~g~~~iiiD~k 87 (433)
T d1e9ra_ 51 RHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPN 87 (433)
T ss_dssp GCEEEEECTTSSHHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred ceEEEEeCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 68999999999999998877543 37788888763
No 201
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=86.83 E-value=0.88 Score=44.76 Aligned_cols=24 Identities=17% Similarity=0.138 Sum_probs=21.2
Q ss_pred ceEEEEccCCChHHHHHHHHHHhc
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAGEA 314 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~e~ 314 (720)
|+|-|.|..|+|||+|+.++...+
T Consensus 7 Rni~i~gh~~~GKTtL~e~ll~~~ 30 (276)
T d2bv3a2 7 RNIGIAAHIDAGKTTTTERILYYT 30 (276)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCHHHHHHHHHHhc
Confidence 589999999999999999996543
No 202
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.83 E-value=0.16 Score=45.17 Aligned_cols=20 Identities=25% Similarity=0.383 Sum_probs=18.8
Q ss_pred EEEEccCCChHHHHHHHHHH
Q 005003 293 VLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~ 312 (720)
|++.|.+|+|||+|++.+.+
T Consensus 3 v~vvG~~~vGKTsLi~r~~~ 22 (164)
T d1yzqa1 3 LVFLGEQSVGKTSLITRFMY 22 (164)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999999976
No 203
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.76 E-value=0.16 Score=45.36 Aligned_cols=22 Identities=18% Similarity=0.295 Sum_probs=19.7
Q ss_pred eEEEEccCCChHHHHHHHHHHh
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e 313 (720)
=|+|.|++|+|||+|.+.+.+.
T Consensus 6 Kv~liG~~~vGKTsLl~~~~~~ 27 (167)
T d1xtqa1 6 KIAILGYRSVGKSSLTIQFVEG 27 (167)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3899999999999999998764
No 204
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.75 E-value=0.16 Score=45.88 Aligned_cols=22 Identities=27% Similarity=0.448 Sum_probs=19.7
Q ss_pred eEEEEccCCChHHHHHHHHHHh
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e 313 (720)
-|+|.|.+|+|||+|++.+.+.
T Consensus 8 Kv~lvG~~~vGKTsLi~r~~~~ 29 (173)
T d2fn4a1 8 KLVVVGGGGVGKSALTIQFIQS 29 (173)
T ss_dssp EEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3999999999999999998763
No 205
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.73 E-value=0.16 Score=45.69 Aligned_cols=20 Identities=35% Similarity=0.609 Sum_probs=18.8
Q ss_pred EEEEccCCChHHHHHHHHHH
Q 005003 293 VLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~ 312 (720)
|++.|.||+|||+|++.+..
T Consensus 8 I~lvG~~~vGKTsll~~~~~ 27 (174)
T d2bmea1 8 FLVIGNAGTGKSCLLHQFIE 27 (174)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 89999999999999999875
No 206
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.68 E-value=0.16 Score=45.81 Aligned_cols=20 Identities=30% Similarity=0.619 Sum_probs=19.1
Q ss_pred EEEEccCCChHHHHHHHHHH
Q 005003 293 VLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~ 312 (720)
|++.|.+|+|||+|.+.+.+
T Consensus 10 i~vvG~~~vGKTsli~~l~~ 29 (177)
T d1x3sa1 10 ILIIGESGVGKSSLLLRFTD 29 (177)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 89999999999999999976
No 207
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.58 E-value=0.17 Score=45.34 Aligned_cols=21 Identities=43% Similarity=0.599 Sum_probs=19.3
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
|++.|++|+|||+|++.+.+.
T Consensus 9 i~vvG~~~vGKTsli~~~~~~ 29 (170)
T d2g6ba1 9 VMLVGDSGVGKTCLLVRFKDG 29 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999998763
No 208
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.45 E-value=0.093 Score=49.47 Aligned_cols=24 Identities=13% Similarity=0.216 Sum_probs=22.0
Q ss_pred eEEEEccCCChHHHHHHHHHHhcC
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEAG 315 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~g 315 (720)
=|.|.|+-|+||||+++.|++.+.
T Consensus 4 ~I~ieG~dGsGKST~~~~L~~~l~ 27 (241)
T d1p5zb_ 4 KISIEGNIAAGKSTFVNILKQLCE 27 (241)
T ss_dssp EEEEECSTTSSHHHHHTTTGGGCT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHh
Confidence 488999999999999999999874
No 209
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=86.30 E-value=0.84 Score=41.89 Aligned_cols=31 Identities=26% Similarity=0.219 Sum_probs=21.6
Q ss_pred ceEEEEccCCChHHHHHHHHHHhcCCCEEEE
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSI 321 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~e~g~pf~~v 321 (720)
+.+++.-|+|+|||..+....-......+.+
T Consensus 41 ~~vlv~apTGsGKT~~~~~~~~~~~~~~~~v 71 (206)
T d1oywa2 41 RDCLVVMPTGGGKSLCYQIPALLLNGLTVVV 71 (206)
T ss_dssp CCEEEECSCHHHHHHHHHHHHHHSSSEEEEE
T ss_pred CCEEEEcCCCCCCcchhhhhhhhccCceEEe
Confidence 3699999999999988765544444433333
No 210
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.12 E-value=0.18 Score=45.54 Aligned_cols=21 Identities=29% Similarity=0.408 Sum_probs=19.3
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
|++.|++|+|||+|+..+.+.
T Consensus 5 ivvvG~~~vGKTsLi~~~~~~ 25 (177)
T d1kmqa_ 5 LVIVGDGACGKTCLLIVNSKD 25 (177)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 889999999999999999874
No 211
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=85.99 E-value=0.19 Score=44.86 Aligned_cols=21 Identities=29% Similarity=0.485 Sum_probs=19.3
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
|+|.|.+|+|||+|.+.+.+.
T Consensus 7 i~lvG~~~vGKTsli~rl~~~ 27 (167)
T d1z0ja1 7 VCLLGDTGVGKSSIMWRFVED 27 (167)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999999763
No 212
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.93 E-value=0.19 Score=44.82 Aligned_cols=21 Identities=24% Similarity=0.498 Sum_probs=19.4
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
|++.|.+|+|||+|.+.+...
T Consensus 6 ivvvG~~~vGKTsli~r~~~~ 26 (167)
T d1c1ya_ 6 LVVLGSGGVGKSALTVQFVQG 26 (167)
T ss_dssp EEEECSTTSSHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHcC
Confidence 899999999999999999764
No 213
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.91 E-value=0.19 Score=45.16 Aligned_cols=21 Identities=33% Similarity=0.553 Sum_probs=19.2
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
|++.|+||+|||+|+..+...
T Consensus 9 I~vvG~~~vGKSSli~~~~~~ 29 (174)
T d1wmsa_ 9 VILLGDGGVGKSSLMNRYVTN 29 (174)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 899999999999999988763
No 214
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=85.33 E-value=0.21 Score=44.56 Aligned_cols=21 Identities=19% Similarity=0.447 Sum_probs=18.9
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
|++.|.+|+|||+|...+.+.
T Consensus 6 i~vvG~~~vGKTsLi~~~~~~ 26 (170)
T d1ek0a_ 6 LVLLGEAAVGKSSIVLRFVSN 26 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 889999999999999998763
No 215
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=85.13 E-value=0.3 Score=46.91 Aligned_cols=31 Identities=26% Similarity=0.274 Sum_probs=22.7
Q ss_pred eEEEEccCCChHHHHHHHHHHhcCCCEEEEe
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEAGVPFFSIS 322 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~g~pf~~vs 322 (720)
..+|.|++|+|||+|..++..+.....-.++
T Consensus 97 t~~~~G~SGVGKSTLiN~L~~~~~~~T~~vs 127 (225)
T d1u0la2 97 ISTMAGLSGVGKSSLLNAINPGLKLRVSEVS 127 (225)
T ss_dssp EEEEECSTTSSHHHHHHHHSTTCCCC-----
T ss_pred eEEEECCCCCCHHHHHHhhcchhhhhccCcc
Confidence 5789999999999999999877665544444
No 216
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=84.83 E-value=0.16 Score=46.08 Aligned_cols=22 Identities=27% Similarity=0.416 Sum_probs=19.6
Q ss_pred ceEEEEccCCChHHHHHHHHHH
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~ 312 (720)
--|++.|+||+|||+|.+.+..
T Consensus 18 ~KI~lvG~~~vGKTsLi~~l~~ 39 (182)
T d1moza_ 18 LRILILGLDGAGKTTILYRLQI 39 (182)
T ss_dssp EEEEEEEETTSSHHHHHHHTCC
T ss_pred EEEEEECCCCCCHHHHHHHHhc
Confidence 3599999999999999999854
No 217
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.64 E-value=0.23 Score=44.75 Aligned_cols=20 Identities=50% Similarity=0.853 Sum_probs=18.8
Q ss_pred EEEEccCCChHHHHHHHHHH
Q 005003 293 VLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~ 312 (720)
|+|.|.+|+|||+|++.+..
T Consensus 6 v~lvG~~~vGKTsLi~~~~~ 25 (172)
T d2g3ya1 6 VVLIGEQGVGKSTLANIFAG 25 (172)
T ss_dssp EEEECCTTSSHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 89999999999999999975
No 218
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=84.64 E-value=0.24 Score=44.45 Aligned_cols=21 Identities=29% Similarity=0.493 Sum_probs=19.3
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
|+|.|.+|+|||+|++.+.+.
T Consensus 7 i~lvG~~~vGKTsll~~~~~~ 27 (169)
T d1x1ra1 7 LVVVGDGGVGKSALTIQFFQK 27 (169)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 889999999999999999873
No 219
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=84.46 E-value=0.23 Score=45.61 Aligned_cols=20 Identities=35% Similarity=0.629 Sum_probs=18.7
Q ss_pred EEEEccCCChHHHHHHHHHH
Q 005003 293 VLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~ 312 (720)
|++.|++|+|||+|+..+.+
T Consensus 9 ivvvG~~~vGKTsli~~l~~ 28 (194)
T d2bcgy1 9 LLLIGNSGVGKSCLLLRFSD 28 (194)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHhh
Confidence 89999999999999999876
No 220
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=84.33 E-value=0.099 Score=46.10 Aligned_cols=21 Identities=33% Similarity=0.670 Sum_probs=19.6
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
|.|.|.||+|||+|..++.++
T Consensus 3 I~liG~~n~GKSSLin~l~g~ 23 (160)
T d1xzpa2 3 MVIVGKPNVGKSTLLNRLLNE 23 (160)
T ss_dssp EEEECCHHHHTCHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 789999999999999999875
No 221
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=84.28 E-value=0.15 Score=45.91 Aligned_cols=20 Identities=35% Similarity=0.577 Sum_probs=8.6
Q ss_pred EEEEccCCChHHHHHHHHHH
Q 005003 293 VLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~ 312 (720)
|++.|.||+|||+|.+++.+
T Consensus 9 i~vvG~~~vGKTsLi~~l~~ 28 (173)
T d2fu5c1 9 LLLIGDSGVGKTCVLFRFSE 28 (173)
T ss_dssp EEEECCCCC-----------
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 88999999999999998875
No 222
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=84.28 E-value=0.22 Score=44.55 Aligned_cols=21 Identities=33% Similarity=0.713 Sum_probs=19.3
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
|.|.|.||+|||+|..++.+.
T Consensus 8 I~iiG~~nvGKSSLin~L~~~ 28 (179)
T d1egaa1 8 IAIVGRPNVGKSTLLNKLLGQ 28 (179)
T ss_dssp EEEECSSSSSHHHHHHHHHTC
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 889999999999999999763
No 223
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=83.83 E-value=2.3 Score=44.09 Aligned_cols=34 Identities=26% Similarity=0.444 Sum_probs=31.2
Q ss_pred eEEEEccCCChHHHHHHHHHHhcCCCEEEEechh
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSE 325 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~ 325 (720)
..+|.|-+|+|||+++.+++.+.+.|++.+....
T Consensus 33 ~q~l~GltGS~ka~~iA~l~~~~~rp~LVVt~n~ 66 (413)
T d1t5la1 33 HQTLLGATGTGKTFTISNVIAQVNKPTLVIAHNK 66 (413)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHTCCEEEECSSH
T ss_pred cEEEeCCCCcHHHHHHHHHHHHhCCCEEEEeCCH
Confidence 5899999999999999999999999999988754
No 224
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.66 E-value=0.26 Score=44.84 Aligned_cols=21 Identities=33% Similarity=0.475 Sum_probs=19.3
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
|+|.|.+|+|||+|.+.+...
T Consensus 12 i~lvG~~~vGKTsLi~r~~~~ 32 (185)
T d2atxa1 12 CVVVGDGAVGKTCLLMSYAND 32 (185)
T ss_dssp EEEEECTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHhhC
Confidence 899999999999999998763
No 225
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=83.66 E-value=0.26 Score=44.70 Aligned_cols=21 Identities=33% Similarity=0.548 Sum_probs=19.2
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
|+|.|.+|+|||+|++.+...
T Consensus 5 ivliG~~~vGKTsli~r~~~~ 25 (179)
T d1m7ba_ 5 IVVVGDSQCGKTALLHVFAKD 25 (179)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 799999999999999998773
No 226
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.51 E-value=0.28 Score=44.49 Aligned_cols=22 Identities=27% Similarity=0.350 Sum_probs=19.7
Q ss_pred eEEEEccCCChHHHHHHHHHHh
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e 313 (720)
-|++.|.+|+|||+|.+.+...
T Consensus 7 KivviG~~~vGKTsli~~~~~~ 28 (183)
T d1mh1a_ 7 KCVVVGDGAVGKTCLLISYTTN 28 (183)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 3899999999999999998764
No 227
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=83.41 E-value=0.094 Score=46.96 Aligned_cols=22 Identities=27% Similarity=0.332 Sum_probs=19.6
Q ss_pred EEEEccCCChHHHHHHHHHHhc
Q 005003 293 VLLVGPPGTGKTLLAKAIAGEA 314 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e~ 314 (720)
.+|+||.|+|||++..||.--+
T Consensus 27 tvi~G~NGsGKStil~Ai~~~L 48 (222)
T d1qhla_ 27 TTLSGGNGAGKSTTMAAFVTAL 48 (222)
T ss_dssp HHHHSCCSHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 6889999999999999997654
No 228
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.37 E-value=0.27 Score=44.90 Aligned_cols=21 Identities=29% Similarity=0.384 Sum_probs=19.0
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
|+|.|++|+|||+|+..+...
T Consensus 6 vvllG~~~vGKTSli~r~~~~ 26 (191)
T d2ngra_ 6 CVVVGDGAVGKTCLLISYTTN 26 (191)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 889999999999999988764
No 229
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=83.28 E-value=0.25 Score=44.51 Aligned_cols=22 Identities=41% Similarity=0.611 Sum_probs=19.9
Q ss_pred eEEEEccCCChHHHHHHHHHHh
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e 313 (720)
-|.+.|.+|+|||+|..++.+.
T Consensus 10 kV~iiG~~~~GKSTLin~l~~~ 31 (186)
T d1mkya2 10 KVAIVGRPNVGKSTLFNAILNK 31 (186)
T ss_dssp EEEEECSTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
Confidence 4899999999999999999864
No 230
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.13 E-value=0.15 Score=45.88 Aligned_cols=20 Identities=45% Similarity=0.594 Sum_probs=17.8
Q ss_pred EEEEccCCChHHHHHHHHHH
Q 005003 293 VLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~ 312 (720)
|++.|++|+|||+|...+.+
T Consensus 6 i~vvG~~~vGKTsli~~~~~ 25 (170)
T d1i2ma_ 6 LVLVGDGGTGKTTFVKRHLT 25 (170)
T ss_dssp EEEEECTTSSHHHHHHTTC-
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 89999999999999998865
No 231
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=82.54 E-value=0.21 Score=48.02 Aligned_cols=22 Identities=45% Similarity=0.676 Sum_probs=19.9
Q ss_pred eEEEEccCCChHHHHHHHHHHh
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e 313 (720)
-+-|.||.|+|||||.+.+++-
T Consensus 27 i~~iiG~nGaGKSTLl~~l~Gl 48 (231)
T d1l7vc_ 27 ILHLVGPNGAGKSTLLARMAGM 48 (231)
T ss_dssp EEECBCCTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCcHHHHHHHHhCC
Confidence 4889999999999999999883
No 232
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=82.41 E-value=1.1 Score=43.05 Aligned_cols=17 Identities=29% Similarity=0.350 Sum_probs=14.6
Q ss_pred CCceEEEEccCCChHHH
Q 005003 289 IPKGVLLVGPPGTGKTL 305 (720)
Q Consensus 289 ~prgVLL~GPPGTGKT~ 305 (720)
..+.+++.+|+|+|||+
T Consensus 8 ~~~~~lv~~~TGsGKT~ 24 (305)
T d2bmfa2 8 KKRLTIMDLHPGAGKTK 24 (305)
T ss_dssp TTCEEEECCCTTSSTTT
T ss_pred cCCcEEEEECCCCCHHH
Confidence 34579999999999995
No 233
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=81.88 E-value=0.7 Score=44.36 Aligned_cols=34 Identities=32% Similarity=0.430 Sum_probs=26.8
Q ss_pred ceEEEEccCCChHHHHHHHHHHh---cCCCEEEEech
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAGE---AGVPFFSISGS 324 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~e---~g~pf~~vs~s 324 (720)
+-++++|.=|+||||++-.+|.. .|..++.+++.
T Consensus 21 ~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~D 57 (279)
T d1ihua2 21 GLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSD 57 (279)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 45788899999999987777553 37888888875
No 234
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=81.57 E-value=0.54 Score=42.90 Aligned_cols=32 Identities=25% Similarity=0.287 Sum_probs=25.2
Q ss_pred ceEEEEcc-CCChHHHHHHHHHHhc---CCCEEEEe
Q 005003 291 KGVLLVGP-PGTGKTLLAKAIAGEA---GVPFFSIS 322 (720)
Q Consensus 291 rgVLL~GP-PGTGKT~LArAlA~e~---g~pf~~vs 322 (720)
|-++++|- +|+|||+++-.+|..+ |..+..++
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id 37 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK 37 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence 46899999 5999999988887754 66666665
No 235
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=81.51 E-value=0.27 Score=43.77 Aligned_cols=21 Identities=19% Similarity=0.360 Sum_probs=19.1
Q ss_pred eEEEEccCCChHHHHHHHHHH
Q 005003 292 GVLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~ 312 (720)
-|.|.|+|++|||+|.+++.+
T Consensus 18 ~I~lvG~~NvGKSSL~n~L~~ 38 (188)
T d1puia_ 18 EVAFAGRSNAGKSSALNTLTN 38 (188)
T ss_dssp EEEEEECTTSSHHHHHTTTCC
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 499999999999999999954
No 236
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
Probab=81.45 E-value=1.4 Score=41.87 Aligned_cols=15 Identities=27% Similarity=0.603 Sum_probs=13.8
Q ss_pred ceEEEEccCCChHHH
Q 005003 291 KGVLLVGPPGTGKTL 305 (720)
Q Consensus 291 rgVLL~GPPGTGKT~ 305 (720)
+.+++..|+|||||+
T Consensus 59 ~dvvi~a~TGsGKTl 73 (238)
T d1wrba1 59 RDIMACAQTGSGKTA 73 (238)
T ss_dssp CCEEEECCTTSSHHH
T ss_pred CCEEEECCCCCCcce
Confidence 479999999999997
No 237
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=81.21 E-value=0.25 Score=48.75 Aligned_cols=23 Identities=35% Similarity=0.504 Sum_probs=19.8
Q ss_pred EEEEccCCChHHHHHHHHHHhcC
Q 005003 293 VLLVGPPGTGKTLLAKAIAGEAG 315 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e~g 315 (720)
-+|+||.|+|||++..||+--++
T Consensus 29 nvi~G~NGsGKS~il~AI~~~L~ 51 (329)
T g1xew.1 29 TAIVGANGSGKSNIGDAILFVLG 51 (329)
T ss_dssp EEEEECTTSSSHHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHHHHHC
Confidence 48999999999999999975443
No 238
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=80.93 E-value=0.28 Score=44.12 Aligned_cols=20 Identities=45% Similarity=0.577 Sum_probs=18.7
Q ss_pred EEEEccCCChHHHHHHHHHH
Q 005003 293 VLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~ 312 (720)
|.|.|.||+|||+|..++.+
T Consensus 4 VaivG~~nvGKSTLin~L~~ 23 (180)
T d1udxa2 4 VGLVGYPNAGKSSLLAAMTR 23 (180)
T ss_dssp EEEECCGGGCHHHHHHHHCS
T ss_pred EEEECCCCCCHHHHHHHHhC
Confidence 88999999999999999965
No 239
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=80.51 E-value=0.38 Score=43.58 Aligned_cols=18 Identities=33% Similarity=0.652 Sum_probs=17.5
Q ss_pred EEEEccCCChHHHHHHHH
Q 005003 293 VLLVGPPGTGKTLLAKAI 310 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAl 310 (720)
|+|.|.+|+|||+|.+.+
T Consensus 5 ivllG~~~vGKTsll~r~ 22 (200)
T d1zcba2 5 ILLLGAGESGKSTFLKQM 22 (200)
T ss_dssp EEEECSTTSSHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHH
Confidence 899999999999999999
No 240
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=79.56 E-value=0.2 Score=48.47 Aligned_cols=32 Identities=38% Similarity=0.512 Sum_probs=19.7
Q ss_pred ceEEEEccCCChHHHHHHHHHHhcCCCEEEEe
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSIS 322 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~e~g~pf~~vs 322 (720)
+..+|.|++|+|||+|..++..+.....-.++
T Consensus 98 ~~~vl~G~SGVGKSSLiN~L~~~~~~~t~~vs 129 (231)
T d1t9ha2 98 KTTVFAGQSGVGKSSLLNAISPELGLRTNEIS 129 (231)
T ss_dssp SEEEEEESHHHHHHHHHHHHCC----------
T ss_pred ceEEEECCCCccHHHHHHhhccHhHhhhcccc
Confidence 35778899999999999999876554433333
No 241
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=78.87 E-value=1.8 Score=42.39 Aligned_cols=21 Identities=33% Similarity=0.539 Sum_probs=19.5
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
++|.|++|+|||+|+..++..
T Consensus 71 ~~If~~~g~GKt~l~~~i~~~ 91 (276)
T d2jdid3 71 IGLFGGAGVGKTVLIMELINN 91 (276)
T ss_dssp EEEEECTTSSHHHHHHHHHHH
T ss_pred EEeeCCCCCCHHHHHHHHHHH
Confidence 899999999999999999765
No 242
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.10 E-value=0.64 Score=42.01 Aligned_cols=22 Identities=18% Similarity=0.259 Sum_probs=19.9
Q ss_pred eEEEEccCCChHHHHHHHHHHh
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e 313 (720)
-|++.|++|+|||+|...+.+.
T Consensus 7 ki~vlG~~~vGKTsLi~~~~~~ 28 (175)
T d2bmja1 7 RLGVLGDARSGKSSLIHRFLTG 28 (175)
T ss_dssp EEEEECCTTTTHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 4899999999999999999774
No 243
>d1z63a1 c.37.1.19 (A:432-661) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=76.01 E-value=3.5 Score=38.25 Aligned_cols=38 Identities=29% Similarity=0.337 Sum_probs=27.1
Q ss_pred ceEEEEccCCChHHHHHHHHHHhc-----CCCEEEEechhhHH
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAGEA-----GVPFFSISGSEFVE 328 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~e~-----g~pf~~vs~s~~~~ 328 (720)
.|.+|.=++|+|||..+-+++... ..+++.+....+..
T Consensus 32 ~g~iLaDe~GlGKT~~~i~~~~~~~~~~~~~~~LIv~p~~l~~ 74 (230)
T d1z63a1 32 FGICLADDMGLGKTLQTIAVFSDAKKENELTPSLVICPLSVLK 74 (230)
T ss_dssp CCEEECCCTTSCHHHHHHHHHHHHHHTTCCSSEEEEECSTTHH
T ss_pred CCEEEEeCCCCChHHHHHHhhhhhhhcccccccceecchhhhh
Confidence 489999999999999888776643 24566665554443
No 244
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=75.70 E-value=0.85 Score=46.10 Aligned_cols=30 Identities=27% Similarity=0.407 Sum_probs=24.2
Q ss_pred eEEEEccCCChHHHHHHHHHHhcC--CCEEEE
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEAG--VPFFSI 321 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~g--~pf~~v 321 (720)
-|.|.|+-|+||||+++.+++.++ .++..+
T Consensus 8 rI~iEG~iGsGKSTl~~~L~~~l~~~~~v~~~ 39 (333)
T d1p6xa_ 8 RIYLDGVYGIGKSTTGRVMASAASGGSPTLYF 39 (333)
T ss_dssp EEEEECSTTSSHHHHHHHHHSGGGCSSCEEEE
T ss_pred EEEEECCccCCHHHHHHHHHHHhccCCCeEEE
Confidence 478899999999999999999874 344444
No 245
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=75.19 E-value=0.83 Score=42.82 Aligned_cols=23 Identities=26% Similarity=0.382 Sum_probs=19.9
Q ss_pred eEEEEccCCChHHHHHHHHHHhc
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEA 314 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~ 314 (720)
-|||.|++|+|||+|.+.+...-
T Consensus 8 KilllG~~~vGKTsll~~~~~~~ 30 (221)
T d1azta2 8 RLLLLGAGESGKSTIVKQMRILH 30 (221)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhcCC
Confidence 38999999999999999986543
No 246
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=74.76 E-value=0.75 Score=41.23 Aligned_cols=21 Identities=29% Similarity=0.419 Sum_probs=19.3
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
|+|.|..|+|||+|.+.+...
T Consensus 5 iv~lG~~~vGKTsll~r~~~~ 25 (200)
T d2bcjq2 5 LLLLGTGESGKSTFIKQMRII 25 (200)
T ss_dssp EEEEESTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 899999999999999999664
No 247
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=73.76 E-value=0.48 Score=46.06 Aligned_cols=23 Identities=35% Similarity=0.460 Sum_probs=19.6
Q ss_pred eEEEEccCCChHHHHHHHHHHhc
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEA 314 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~ 314 (720)
--+|+||.|+|||++.+|++--+
T Consensus 26 lnvlvG~NgsGKS~iL~Ai~~~l 48 (308)
T d1e69a_ 26 VTAIVGPNGSGKSNIIDAIKWVF 48 (308)
T ss_dssp EEEEECCTTTCSTHHHHHHHHTS
T ss_pred eEEEECCCCCcHHHHHHHHHHHh
Confidence 35899999999999999997543
No 248
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=72.90 E-value=0.75 Score=46.35 Aligned_cols=23 Identities=35% Similarity=0.608 Sum_probs=19.8
Q ss_pred EEEEccCCChHHHHHHHHHHhcC
Q 005003 293 VLLVGPPGTGKTLLAKAIAGEAG 315 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e~g 315 (720)
-+|+||.|+|||++..||+=-+|
T Consensus 28 ~~i~G~NGsGKS~ileAi~~~lg 50 (427)
T d1w1wa_ 28 TSIIGPNGSGKSNMMDAISFVLG 50 (427)
T ss_dssp EEEECSTTSSHHHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHHHHhC
Confidence 48999999999999999975444
No 249
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=72.18 E-value=2.3 Score=43.94 Aligned_cols=48 Identities=29% Similarity=0.441 Sum_probs=37.8
Q ss_pred HHHHHHHHhcCchhhhhccCcCCceEEEEccCCChHHHHHHHHHHhcCCCEEEEechh
Q 005003 268 DFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSE 325 (720)
Q Consensus 268 eL~eiv~~l~~p~~~~~~g~~~prgVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~ 325 (720)
.++++++.+.... +.++|.|.+|++|++++.+++...+.|++.|..+.
T Consensus 16 aI~~l~~~L~~g~----------~~~~L~GlsgS~ka~~~A~l~~~~~rp~LvVt~~~ 63 (408)
T d1c4oa1 16 AIAGLVEALRDGE----------RFVTLLGATGTGKTVTMAKVIEALGRPALVLAPNK 63 (408)
T ss_dssp HHHHHHHHHHTTC----------SEEEEEECTTSCHHHHHHHHHHHHTCCEEEEESSH
T ss_pred HHHHHHHHHhcCC----------CcEEEecCCCCHHHHHHHHHHHHhCCCEEEEeCCH
Confidence 4556666555432 25899999999999999999999999999887654
No 250
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=71.73 E-value=1.2 Score=45.86 Aligned_cols=23 Identities=26% Similarity=0.514 Sum_probs=20.9
Q ss_pred CceEEEEccCCChHHHHHHHHHH
Q 005003 290 PKGVLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 290 prgVLL~GPPGTGKT~LArAlA~ 312 (720)
|-.|.+.|.||+|||+|..++.+
T Consensus 56 ~l~Iai~G~~n~GKSSLiNaL~G 78 (400)
T d1tq4a_ 56 VLNVAVTGETGSGKSSFINTLRG 78 (400)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHT
T ss_pred CcEEEEECCCCCCHHHHHHHHhC
Confidence 45799999999999999999975
No 251
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=71.41 E-value=0.95 Score=44.87 Aligned_cols=21 Identities=48% Similarity=0.743 Sum_probs=19.4
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
++|.|++|||||+|+..+++.
T Consensus 46 ~~I~g~~g~GKT~l~~~i~~~ 66 (289)
T d1xpua3 46 GLIVAPPKAGKTMLLQNIAQS 66 (289)
T ss_dssp EEEEECSSSSHHHHHHHHHHH
T ss_pred eeEeCCCCCCHHHHHHHHHHH
Confidence 999999999999999998864
No 252
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=71.04 E-value=0.76 Score=43.45 Aligned_cols=22 Identities=45% Similarity=0.576 Sum_probs=19.6
Q ss_pred EEEEccCCChHHHHHHHHHHhc
Q 005003 293 VLLVGPPGTGKTLLAKAIAGEA 314 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e~ 314 (720)
.+|+|..|+|||||.+.+.++.
T Consensus 6 ~iitGFLGaGKTTll~~lL~~~ 27 (222)
T d1nija1 6 TLLTGFLGAGKTTLLRHILNEQ 27 (222)
T ss_dssp EEEEESSSSSCHHHHHHHHHSC
T ss_pred EEEeeCCCCCHHHHHHHHHhcC
Confidence 7899999999999999998754
No 253
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=69.76 E-value=1.8 Score=41.28 Aligned_cols=33 Identities=18% Similarity=0.347 Sum_probs=27.3
Q ss_pred eEEEEccCCChHHHHHHHHHHhc---CCCEEEEech
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEA---GVPFFSISGS 324 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~---g~pf~~vs~s 324 (720)
-|-++|.=|+|||++|-.+|..+ |..+..+++.
T Consensus 3 ~Iai~gKGGvGKTT~a~nLA~~LA~~G~rVllID~D 38 (269)
T d1cp2a_ 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred EEEEECCCcCCHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 46779999999999988876644 7889999875
No 254
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=68.73 E-value=0.87 Score=45.97 Aligned_cols=24 Identities=29% Similarity=0.383 Sum_probs=21.6
Q ss_pred EEEEccCCChHHHHHHHHHHhcCC
Q 005003 293 VLLVGPPGTGKTLLAKAIAGEAGV 316 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e~g~ 316 (720)
|.|.|+-|+||||+++.+++.++.
T Consensus 8 I~IEG~iGsGKSTl~~~L~~~l~~ 31 (331)
T d1osna_ 8 IYLDGAYGIGKTTAAEEFLHHFAI 31 (331)
T ss_dssp EEEEESSSSCTTHHHHHHHHTTTT
T ss_pred EEEECCCCCCHHHHHHHHHHHHhh
Confidence 778999999999999999998753
No 255
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=67.98 E-value=1.2 Score=39.48 Aligned_cols=20 Identities=30% Similarity=0.519 Sum_probs=18.4
Q ss_pred EEEEccCCChHHHHHHHHHH
Q 005003 293 VLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~ 312 (720)
|+|.|..|+|||+|.+.+..
T Consensus 5 ivllG~~~vGKTsl~~r~~~ 24 (195)
T d1svsa1 5 LLLLGAGESGKSTIVKQMKI 24 (195)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhh
Confidence 89999999999999998854
No 256
>d1xx6a1 c.37.1.24 (A:2-142) Thymidine kinase, TK1, N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]}
Probab=67.53 E-value=5.5 Score=34.76 Aligned_cols=68 Identities=21% Similarity=0.237 Sum_probs=38.0
Q ss_pred EEEEccCCChHHHH-HHHH--HHhcCCCEEEEechh-hH--H----HHhhh-----chHHHHHHHHHHHhcCCeEEEEcc
Q 005003 293 VLLVGPPGTGKTLL-AKAI--AGEAGVPFFSISGSE-FV--E----MFVGV-----GASRVRDLFKKAKENAPCIVFVDE 357 (720)
Q Consensus 293 VLL~GPPGTGKT~L-ArAl--A~e~g~pf~~vs~s~-~~--~----~~~G~-----~~~~vr~lF~~A~~~~P~ILfIDE 357 (720)
=+++||-.+|||+- .+.+ ....|.+++.+..+. -. . ...|. ......+++... ...+.+|+|||
T Consensus 10 ~lI~GpMfSGKTteLi~~~~~~~~~g~~vl~i~~~~D~Ry~~~~i~sh~g~~~~a~~~~~~~~~~~~~-~~~~dvI~IDE 88 (141)
T d1xx6a1 10 EVIVGPMYSGKSEELIRRIRRAKIAKQKIQVFKPEIDNRYSKEDVVSHMGEKEQAVAIKNSREILKYF-EEDTEVIAIDE 88 (141)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEEC-------CEEECTTSCEEECEEESSSTHHHHHC-CTTCSEEEECS
T ss_pred EEEEeccccHHHHHHHHHHHHhhhcCCcEEEEEeccccccccceeeecccceEEEEEecchhhhhhhh-cccccEEEEee
Confidence 46789999999974 4444 335577777765431 10 0 00111 011122334332 23468999999
Q ss_pred chhc
Q 005003 358 IDAV 361 (720)
Q Consensus 358 ID~l 361 (720)
+.-+
T Consensus 89 ~QFf 92 (141)
T d1xx6a1 89 VQFF 92 (141)
T ss_dssp GGGS
T ss_pred hhhc
Confidence 9988
No 257
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=67.24 E-value=1.5 Score=42.70 Aligned_cols=23 Identities=43% Similarity=0.625 Sum_probs=20.5
Q ss_pred ceEEEEccCCChHHHHHHHHHHh
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~e 313 (720)
|+|.+.|..|+|||+|+.++...
T Consensus 3 RNv~iiGh~~~GKTtL~e~ll~~ 25 (267)
T d2dy1a2 3 RTVALVGHAGSGKTTLTEALLYK 25 (267)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHH
T ss_pred eEEEEEcCCCCcHHHHHHHHHHH
Confidence 58999999999999999999543
No 258
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=65.16 E-value=1 Score=45.49 Aligned_cols=23 Identities=30% Similarity=0.501 Sum_probs=18.8
Q ss_pred EEEEccCCChHHHHHHHHHHhcC
Q 005003 293 VLLVGPPGTGKTLLAKAIAGEAG 315 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e~g 315 (720)
|.|-|+-|+||||+++.+++.++
T Consensus 7 I~IEG~iGsGKTTl~~~La~~l~ 29 (329)
T d1e2ka_ 7 VYIDGPHGMGKTTTTQLLVALGS 29 (329)
T ss_dssp EEECSCTTSSHHHHHHHHTC---
T ss_pred EEEECCcCCCHHHHHHHHHHHhC
Confidence 67889999999999999998764
No 259
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=64.50 E-value=1.6 Score=39.11 Aligned_cols=22 Identities=27% Similarity=0.345 Sum_probs=19.9
Q ss_pred eEEEEccCCChHHHHHHHHHHh
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e 313 (720)
.|-+.|.|++|||+|..++.+.
T Consensus 7 nIaiiG~~naGKSTL~n~L~~~ 28 (179)
T d1wb1a4 7 NLGIFGHIDHGKTTLSKVLTEI 28 (179)
T ss_dssp EEEEEECTTSSHHHHHHHHHTT
T ss_pred EEEEEeCCCCcHHHHHHHHHHh
Confidence 5889999999999999999764
No 260
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=64.27 E-value=2.7 Score=38.53 Aligned_cols=30 Identities=23% Similarity=0.331 Sum_probs=22.7
Q ss_pred EEEccCCChHHHHHHHHHHhc---CCCEEEEec
Q 005003 294 LLVGPPGTGKTLLAKAIAGEA---GVPFFSISG 323 (720)
Q Consensus 294 LL~GPPGTGKT~LArAlA~e~---g~pf~~vs~ 323 (720)
+..|..|+|||++|..+|..+ |..+..+++
T Consensus 6 v~s~KGGvGKTtia~nlA~~la~~g~~VlliD~ 38 (232)
T d1hyqa_ 6 VASGKGGTGKTTITANLGVALAQLGHDVTIVDA 38 (232)
T ss_dssp EEESSSCSCHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred EECCCCCChHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 344899999999999887654 666666665
No 261
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR {Bacillus stearothermophilus [TaxId: 1422]}
Probab=62.27 E-value=1.5 Score=40.29 Aligned_cols=49 Identities=16% Similarity=0.075 Sum_probs=27.1
Q ss_pred CccccccchHHHHHHHHHHHHhcCchhhhhccCc---CCceEEEEccCCChHHH
Q 005003 255 TFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGAR---IPKGVLLVGPPGTGKTL 305 (720)
Q Consensus 255 ~f~dI~G~de~k~eL~eiv~~l~~p~~~~~~g~~---~prgVLL~GPPGTGKT~ 305 (720)
+|+|+.-.+...+.|.+. -+..|...+...++ ..+.+++..|+|||||+
T Consensus 2 ~F~~l~L~~~l~~~l~~~--g~~~pt~iQ~~aip~~l~G~dvii~a~TGSGKTl 53 (209)
T d1q0ua_ 2 QFTRFPFQPFIIEAIKTL--RFYKPTEIQERIIPGALRGESMVGQSQTGTGKTH 53 (209)
T ss_dssp CGGGSCCCHHHHHHHHHT--TCCSCCHHHHHHHHHHHHTCCEEEECCSSHHHHH
T ss_pred ccccCCcCHHHHHHHHHC--CCCCCCHHHHHHHHHHHCCCCeEeecccccccce
Confidence 466665444444444331 13334333322111 13579999999999997
No 262
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=61.54 E-value=3.7 Score=37.48 Aligned_cols=32 Identities=28% Similarity=0.477 Sum_probs=23.4
Q ss_pred eEEEE-ccCCChHHHHHHHHHHhc---CCCEEEEec
Q 005003 292 GVLLV-GPPGTGKTLLAKAIAGEA---GVPFFSISG 323 (720)
Q Consensus 292 gVLL~-GPPGTGKT~LArAlA~e~---g~pf~~vs~ 323 (720)
-|-++ +..|+|||++|-.+|..+ |.++..+++
T Consensus 4 vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~ 39 (237)
T d1g3qa_ 4 IISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDG 39 (237)
T ss_dssp EEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 35455 778999999999987654 566666654
No 263
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=61.09 E-value=1.8 Score=40.16 Aligned_cols=50 Identities=20% Similarity=0.208 Sum_probs=29.4
Q ss_pred CccccccchHHHHHHHHHHHHhcCchhhhhccC---cCCceEEEEccCCChHHHH
Q 005003 255 TFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGA---RIPKGVLLVGPPGTGKTLL 306 (720)
Q Consensus 255 ~f~dI~G~de~k~eL~eiv~~l~~p~~~~~~g~---~~prgVLL~GPPGTGKT~L 306 (720)
+|+|+.=.++..+.+.+. -+..|...+...+ -..+.+++..|+|||||+.
T Consensus 2 ~F~dl~L~~~l~~~l~~~--g~~~pt~iQ~~aip~il~g~dvl~~A~TGsGKTla 54 (207)
T d1t6na_ 2 GFRDFLLKPELLRAIVDC--GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAV 54 (207)
T ss_dssp CSTTSCCCHHHHHHHHHT--TCCCCCHHHHHHHHHHHTTCCEEEECCTTSCHHHH
T ss_pred CccccCcCHHHHHHHHHC--CCCCCCHHHHHHHHHHHcCCCeEEEeccccccccc
Confidence 477775445555544432 2444444433221 1236799999999999853
No 264
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=61.04 E-value=1.4 Score=44.24 Aligned_cols=17 Identities=41% Similarity=0.602 Sum_probs=14.8
Q ss_pred eEEEEccCCChHHHHHH
Q 005003 292 GVLLVGPPGTGKTLLAK 308 (720)
Q Consensus 292 gVLL~GPPGTGKT~LAr 308 (720)
-.|++|.+|||||||..
T Consensus 16 valffGLSGTGKTTLs~ 32 (318)
T d1j3ba1 16 VAVFFGLSGTGKTTLST 32 (318)
T ss_dssp EEEEEECTTSCHHHHTC
T ss_pred EEEEEccCCCCcccccc
Confidence 47999999999999764
No 265
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=60.72 E-value=3 Score=38.71 Aligned_cols=53 Identities=21% Similarity=0.181 Sum_probs=31.2
Q ss_pred CCCCccccccchHHHHHHHHHHHHhcCchhhhhccCc---CCceEEEEccCCChHHHH
Q 005003 252 TGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGAR---IPKGVLLVGPPGTGKTLL 306 (720)
Q Consensus 252 ~~~~f~dI~G~de~k~eL~eiv~~l~~p~~~~~~g~~---~prgVLL~GPPGTGKT~L 306 (720)
+-.+|+|+.=.++..+.|.+. -+..|...+...++ ..+.+++..|+|||||+.
T Consensus 8 ~~~sF~~l~l~~~l~~~L~~~--g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKT~a 63 (212)
T d1qdea_ 8 VVYKFDDMELDENLLRGVFGY--GFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGT 63 (212)
T ss_dssp CCCCGGGGTCCHHHHHHHHHH--TCCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHHH
T ss_pred cccChhhCCCCHHHHHHHHHC--CCCCCCHHHHHHHHHHHcCCCEEeecccccchhhh
Confidence 346799995444444444431 24444443333221 235799999999999963
No 266
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=60.57 E-value=6 Score=36.88 Aligned_cols=63 Identities=14% Similarity=0.203 Sum_probs=39.1
Q ss_pred HHHHHhcCCeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhhhcCccCCCcEEEEEEeCCCCccchhhcCCCcccce
Q 005003 342 FKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQ 421 (720)
Q Consensus 342 F~~A~~~~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~ldg~~~~~~ViVIaaTN~p~~LD~ALlrpgRFdr~ 421 (720)
+..+....|.+++|||++.-. +...+..+.++|..+. ... .-||.+|+.++.++ -+|+.
T Consensus 218 ~~~~l~~~~~llllDEp~~~L----------d~~~~~~l~~~l~~~~---~~~-~qviv~TH~~~~~~-------~~D~i 276 (292)
T g1f2t.1 218 MSLYLAGEISLLILDEPTPYL----------DEERRRKLITIMERYL---KKI-PQVILVSHDEELKD-------AADHV 276 (292)
T ss_dssp HHHHHHSSCSEEEEESCSCTT----------CHHHHHHHHHHHHHTG---GGS-SEEEEEESCGGGGG-------GCSEE
T ss_pred HhhhhcCCCCEEEEeCCcccC----------CHHHHHHHHHHHHHHH---hCC-CEEEEEeecHHHHH-------hCCEE
Confidence 444556778899999997642 5555666666666553 222 25666788766544 34666
Q ss_pred eeec
Q 005003 422 VTVD 425 (720)
Q Consensus 422 I~i~ 425 (720)
+.+.
T Consensus 277 i~l~ 280 (292)
T g1f2t.1 277 IRIS 280 (292)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6553
No 267
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=59.68 E-value=2.8 Score=40.45 Aligned_cols=26 Identities=23% Similarity=0.540 Sum_probs=22.1
Q ss_pred CcCCceEEEEccCCChHHHHHHHHHHh
Q 005003 287 ARIPKGVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 287 ~~~prgVLL~GPPGTGKT~LArAlA~e 313 (720)
+..|+ |+++|.-++|||+|..++.+.
T Consensus 24 ~~~P~-ivvvG~~SsGKSsliNaLlg~ 49 (299)
T d2akab1 24 LDLPQ-IAVVGGQSAGKSSVLENFVGR 49 (299)
T ss_dssp CCCCE-EEEEEBTTSCHHHHHHHHHTS
T ss_pred CCCCe-EEEEcCCCCCHHHHHHHHhCC
Confidence 45665 889999999999999999863
No 268
>d1z3ix2 c.37.1.19 (X:92-389) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=59.14 E-value=16 Score=35.00 Aligned_cols=42 Identities=21% Similarity=0.209 Sum_probs=27.2
Q ss_pred CCceEEEEccCCChHHHHHHHHHHhc----------CCCEEEEechhhHHHH
Q 005003 289 IPKGVLLVGPPGTGKTLLAKAIAGEA----------GVPFFSISGSEFVEMF 330 (720)
Q Consensus 289 ~prgVLL~GPPGTGKT~LArAlA~e~----------g~pf~~vs~s~~~~~~ 330 (720)
...|.+|.=..|+|||..+-++.... ..+++.+....+...|
T Consensus 78 ~~~g~iLaDemGlGKT~qaia~l~~l~~~~~~~~~~~~~~LIV~P~sl~~qW 129 (298)
T d1z3ix2 78 NSYGCIMADEMGLGKTLQCITLIWTLLKQSPDCKPEIDKVIVVSPSSLVRNW 129 (298)
T ss_dssp TCCEEEECCCTTSCHHHHHHHHHHHHHHCCTTSSCSCSCEEEEECHHHHHHH
T ss_pred cCCceEEEeCCCCCHHHHHHHHHHHHHHhcccccCCCCcEEEEccchhhHHH
Confidence 45689999999999997665543321 1246666666555544
No 269
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.78 E-value=1.7 Score=40.26 Aligned_cols=50 Identities=22% Similarity=0.222 Sum_probs=29.8
Q ss_pred CCccccccchHHHHHHHHHHHHhcCchhhhhccCc---CCceEEEEccCCChHHH
Q 005003 254 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGAR---IPKGVLLVGPPGTGKTL 305 (720)
Q Consensus 254 ~~f~dI~G~de~k~eL~eiv~~l~~p~~~~~~g~~---~prgVLL~GPPGTGKT~ 305 (720)
.+|+|+.-.++..+.+.+. -+..|...+...++ ..+.+++..|+|||||+
T Consensus 3 ~~F~~l~L~~~l~~~l~~~--g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKTl 55 (206)
T d1veca_ 3 NEFEDYCLKRELLMGIFEM--GWEKPSPIQEESIPIALSGRDILARAKNGTGKSG 55 (206)
T ss_dssp SSGGGSCCCHHHHHHHHTT--TCCSCCHHHHHHHHHHHTTCCEEEECCSSSTTHH
T ss_pred CChhccCcCHHHHHHHHHC--CCCCCCHHHHHHHHHHHcCCCEEeeccCcccccc
Confidence 4688876555555555432 13344333332211 23579999999999995
No 270
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=57.87 E-value=1.8 Score=43.09 Aligned_cols=16 Identities=44% Similarity=0.638 Sum_probs=14.4
Q ss_pred eEEEEccCCChHHHHH
Q 005003 292 GVLLVGPPGTGKTLLA 307 (720)
Q Consensus 292 gVLL~GPPGTGKT~LA 307 (720)
-.|+.|.+|||||||.
T Consensus 16 ~alfFGLSGTGKTTLs 31 (313)
T d2olra1 16 VAVFFGLSGTGKTTLS 31 (313)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEEccCCCCcccce
Confidence 4689999999999986
No 271
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}
Probab=57.60 E-value=4 Score=39.15 Aligned_cols=32 Identities=16% Similarity=0.317 Sum_probs=24.4
Q ss_pred EEEEccCCChHHHHHHHHHHh---cCCCEEEEech
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE---AGVPFFSISGS 324 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e---~g~pf~~vs~s 324 (720)
|.++|.=|+|||++|-.+|.. .|..++.+++.
T Consensus 5 IaisgKGGVGKTT~a~NLA~~LA~~G~rVLlID~D 39 (289)
T d2afhe1 5 CAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCD 39 (289)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEecC
Confidence 556999999999976666543 37788888774
No 272
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=57.24 E-value=2.8 Score=39.13 Aligned_cols=26 Identities=42% Similarity=0.551 Sum_probs=21.4
Q ss_pred cCCceEEEEccCCChHHHHHHHHHHhc
Q 005003 288 RIPKGVLLVGPPGTGKTLLAKAIAGEA 314 (720)
Q Consensus 288 ~~prgVLL~GPPGTGKT~LArAlA~e~ 314 (720)
+.|. |-+.|.|++|||+|+.+|.+..
T Consensus 4 r~p~-IaIiGh~d~GKSTL~~~L~~~~ 29 (227)
T d1g7sa4 4 RSPI-VSVLGHVDHGKTTLLDHIRGSA 29 (227)
T ss_dssp CCCE-EEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCE-EEEEeCCCccHHHHHHHHHhhc
Confidence 3444 8889999999999999997653
No 273
>d1htaa_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanothermus fervidus, histone A [TaxId: 2180]}
Probab=56.84 E-value=5.7 Score=30.02 Aligned_cols=32 Identities=22% Similarity=0.253 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHhCCCccCHHHHHHHHHH
Q 005003 465 DLANLLNEAAILAGRRGKAAISSKEIDDSIDR 496 (720)
Q Consensus 465 dL~~lv~eAa~~A~r~~~~~It~~dl~~Al~~ 496 (720)
=+..++++|...+...++..|+.+|+..|+++
T Consensus 36 fi~~l~~~a~~~a~~~kRkTi~~~DV~~Alk~ 67 (68)
T d1htaa_ 36 MGEEIASEAVKLAKHAGRKTIKAEDIELARKM 67 (68)
T ss_dssp HHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHh
Confidence 37789999999999999999999999999875
No 274
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=56.68 E-value=2 Score=45.63 Aligned_cols=20 Identities=35% Similarity=0.551 Sum_probs=15.6
Q ss_pred eEEEEccCCChHHHHH-HHHH
Q 005003 292 GVLLVGPPGTGKTLLA-KAIA 311 (720)
Q Consensus 292 gVLL~GPPGTGKT~LA-rAlA 311 (720)
++++.|.||||||+.+ ..++
T Consensus 26 ~~lV~A~AGSGKT~~lv~ri~ 46 (623)
T g1qhh.1 26 PLLIMAGAGSGKTRVLTHRIA 46 (623)
T ss_dssp CEEEEECTTSCHHHHHHHHHH
T ss_pred CEEEEEeCchHHHHHHHHHHH
Confidence 5899999999999755 4444
No 275
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=55.67 E-value=2.5 Score=39.05 Aligned_cols=23 Identities=30% Similarity=0.276 Sum_probs=20.1
Q ss_pred CceEEEEccCCChHHHHHHHHHH
Q 005003 290 PKGVLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 290 prgVLL~GPPGTGKT~LArAlA~ 312 (720)
+-+|.+.|-++.|||+|+.++-.
T Consensus 3 ~ini~iiGhvd~GKSTL~~~Ll~ 25 (204)
T d2c78a3 3 HVNVGTIGHVDHGKTTLTAALTY 25 (204)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHH
T ss_pred CeEEEEEeCCCCcHHHHHHHHHH
Confidence 35799999999999999999953
No 276
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]}
Probab=53.67 E-value=3.3 Score=41.40 Aligned_cols=70 Identities=20% Similarity=0.307 Sum_probs=38.8
Q ss_pred CCCccccccchHHHHHHHHHHHHhcCchhhhhccCcCCceEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHHHHhh
Q 005003 253 GVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVG 332 (720)
Q Consensus 253 ~~~f~dI~G~de~k~eL~eiv~~l~~p~~~~~~g~~~prgVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~~~~G 332 (720)
..+||.+.+.+..-+++-+.+..+-+. .+. |. .-.++-||..|+|||+..- | . ..|
T Consensus 51 ~f~FD~vf~~~~~q~~vy~~v~~~v~~-~l~--G~--n~~i~aYGqtgSGKT~T~~------G--------~-----~~G 106 (342)
T d1f9va_ 51 EFKFDKIFDQQDTNVDVFKEVGQLVQS-SLD--GY--NVCIFAYGQTGSGKTFTML------N--------P-----GDG 106 (342)
T ss_dssp EEEESEEECTTCCHHHHHHHHHHHHGG-GGG--TC--CEEEEEECCTTSSHHHHHH------S--------T-----TTS
T ss_pred EeecCeEeCCCCCHHHHHHHhhhhhcc-hhc--cc--ccceeeeeccCCccccccc------c--------C-----cCc
Confidence 456777777554444443333221110 111 11 2368889999999998863 1 0 135
Q ss_pred hchHHHHHHHHHHH
Q 005003 333 VGASRVRDLFKKAK 346 (720)
Q Consensus 333 ~~~~~vr~lF~~A~ 346 (720)
.-...++.+|+...
T Consensus 107 iipr~~~~lf~~~~ 120 (342)
T d1f9va_ 107 IIPSTISHIFNWIN 120 (342)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHhhhh
Confidence 55666777777654
No 277
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Trypanosoma cruzi [TaxId: 5693]}
Probab=53.06 E-value=2.5 Score=42.32 Aligned_cols=16 Identities=44% Similarity=0.636 Sum_probs=14.5
Q ss_pred eEEEEccCCChHHHHH
Q 005003 292 GVLLVGPPGTGKTLLA 307 (720)
Q Consensus 292 gVLL~GPPGTGKT~LA 307 (720)
-.|+.|-+|||||||.
T Consensus 16 ~alfFGLSGTGKTTLs 31 (323)
T d1ii2a1 16 VTVFFGLSGTGKTTLS 31 (323)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEEccCCCCcccce
Confidence 4689999999999997
No 278
>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=52.11 E-value=3.7 Score=35.25 Aligned_cols=33 Identities=12% Similarity=0.123 Sum_probs=25.5
Q ss_pred eEEEEccCCChHHHHHHHHHHhc-----CCCEEEEech
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEA-----GVPFFSISGS 324 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~-----g~pf~~vs~s 324 (720)
.|+|.|-+|+||+++|+|+...+ +.++-.++..
T Consensus 8 ~i~~tg~~~~gk~~ia~al~~~l~q~~G~R~vtll~~~ 45 (122)
T d1g8fa3 8 SIVLGNSLTVSREQLSIALLSTFLQFGGGRYYKIFEHN 45 (122)
T ss_dssp EEEECTTCCSCHHHHHHHHHHHHTTSCSCCCEEECCCT
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHhcCCcceEEecCC
Confidence 58999999999999999996644 4565555443
No 279
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis [TaxId: 1423]}
Probab=51.49 E-value=6.2 Score=37.80 Aligned_cols=24 Identities=29% Similarity=0.519 Sum_probs=21.1
Q ss_pred ceEEEEccCCChHHHHHHHHHHhc
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAGEA 314 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~e~ 314 (720)
--+.+.|-|.+|||+|+.++.++-
T Consensus 113 ~~v~vvG~PNvGKSsliN~L~~~~ 136 (273)
T d1puja_ 113 IRALIIGIPNVGKSTLINRLAKKN 136 (273)
T ss_dssp EEEEEEESTTSSHHHHHHHHHTSC
T ss_pred eEEEEEecCccchhhhhhhhhccc
Confidence 358999999999999999998753
No 280
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.42 E-value=2.5 Score=41.90 Aligned_cols=16 Identities=25% Similarity=0.387 Sum_probs=14.6
Q ss_pred eEEEEccCCChHHHHH
Q 005003 292 GVLLVGPPGTGKTLLA 307 (720)
Q Consensus 292 gVLL~GPPGTGKT~LA 307 (720)
.|+-||+.|+|||+..
T Consensus 78 ~i~aYGqtgSGKTyT~ 93 (323)
T d1bg2a_ 78 TIFAYGQTSSGKTHTM 93 (323)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred ceeeecccCCCCceec
Confidence 6999999999999885
No 281
>d1g5ta_ c.37.1.11 (A:) ATP:corrinoid adenosyltransferase CobA {Salmonella typhimurium [TaxId: 90371]}
Probab=49.93 E-value=47 Score=29.05 Aligned_cols=29 Identities=28% Similarity=0.305 Sum_probs=20.2
Q ss_pred EEEEccCCChHHHHHHHHHHhc---CCCEEEE
Q 005003 293 VLLVGPPGTGKTLLAKAIAGEA---GVPFFSI 321 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e~---g~pf~~v 321 (720)
+.+|=-+|=|||+.|--+|=++ |..++.+
T Consensus 5 i~vytG~GKGKTTAAlG~alRA~G~G~rV~iv 36 (157)
T d1g5ta_ 5 IIVFTGNGKGKTTAAFGTAARAVGHGKNVGVV 36 (157)
T ss_dssp EEEEESSSSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEeCCCCCcHHHHHHHHHHHhcCCCEEEEE
Confidence 6677778999999887775433 5555544
No 282
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
Probab=48.93 E-value=4.8 Score=36.68 Aligned_cols=31 Identities=32% Similarity=0.498 Sum_probs=24.8
Q ss_pred EEEEccCCChHHHHHHHHHHhcCCCEEEEech
Q 005003 293 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGS 324 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s 324 (720)
+|+.|+..+|||.+|..++...+ +++|+-.+
T Consensus 2 iLVtGGarSGKS~~AE~l~~~~~-~~~YiAT~ 32 (180)
T d1c9ka_ 2 ILVTGGARSGKSRHAEALIGDAP-QVLYIATS 32 (180)
T ss_dssp EEEEECTTSSHHHHHHHHHCSCS-SEEEEECC
T ss_pred EEEECCCCccHHHHHHHHHhcCC-CcEEEEcc
Confidence 68999999999999999986644 56666544
No 283
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=48.92 E-value=3.8 Score=40.05 Aligned_cols=30 Identities=33% Similarity=0.474 Sum_probs=17.7
Q ss_pred EEEEccCCChHHHHHHHHHH----hcCCCEEEEe
Q 005003 293 VLLVGPPGTGKTLLAKAIAG----EAGVPFFSIS 322 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~----e~g~pf~~vs 322 (720)
|=|.|-|.+|||||-.++-+ -.+.||.+++
T Consensus 3 v~lvG~pn~GKStlfn~lt~~~~~v~nypftT~~ 36 (319)
T d1wxqa1 3 IGVVGKPNVGKSTFFSAATLVDVEIANYPFTTIE 36 (319)
T ss_dssp EEEEECTTSSHHHHHHHHHC--------------
T ss_pred EeEECCCCCCHHHHHHHHHCCCCchhcCCCCccc
Confidence 56899999999999999944 3366777654
No 284
>d1h75a_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Escherichia coli [TaxId: 562]}
Probab=48.41 E-value=22 Score=26.79 Aligned_cols=33 Identities=12% Similarity=0.065 Sum_probs=30.6
Q ss_pred EEEEccCCChHHHHHHHHHHhcCCCEEEEechh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSE 325 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~ 325 (720)
|.+|+-|||+--.-|+.+..+.|++|..++..+
T Consensus 3 i~iYs~~~C~~C~~ak~~L~~~~i~y~~~~i~~ 35 (76)
T d1h75a_ 3 ITIYTRNDCVQCHATKRAMENRGFDFEMINVDR 35 (76)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTTCCCEEEETTT
T ss_pred EEEEeCCCCccHHHHHHHHHhcCceeEEEeecC
Confidence 789999999999999999999999999998754
No 285
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=48.33 E-value=3.6 Score=39.90 Aligned_cols=26 Identities=27% Similarity=0.654 Sum_probs=22.2
Q ss_pred CcCCceEEEEccCCChHHHHHHHHHHh
Q 005003 287 ARIPKGVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 287 ~~~prgVLL~GPPGTGKT~LArAlA~e 313 (720)
...|+ |++.|..++|||++..++.+.
T Consensus 22 ~~lP~-ivVvG~~ssGKSSliNaLlG~ 47 (306)
T d1jwyb_ 22 LDLPQ-IVVVGSQSSGKSSVLENIVGR 47 (306)
T ss_dssp TCCCE-EEEEECSSSSHHHHHHHHHTS
T ss_pred CCCCe-EEEEeCCCCCHHHHHHHHhCC
Confidence 45665 888999999999999999864
No 286
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=47.89 E-value=2.4 Score=41.44 Aligned_cols=31 Identities=32% Similarity=0.528 Sum_probs=25.3
Q ss_pred EEEEccCCChHHHHHHHHHHh-----cCCCEEEEec
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE-----AGVPFFSISG 323 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e-----~g~pf~~vs~ 323 (720)
+=|.|.|.+|||||-.++.+. ++.||.+++.
T Consensus 13 iGivG~Pn~GKSTlfnalT~~~~~~~anypftTi~p 48 (296)
T d1ni3a1 13 TGIVGMPNVGKSTFFRAITKSVLGNPANYPYATIDP 48 (296)
T ss_dssp EEEEECSSSSHHHHHHHHHHSTTTSTTCCSSCCCCT
T ss_pred EEEECCCCCCHHHHHHHHHCCCCCCcCCCCccCccC
Confidence 779999999999999999653 3678877654
No 287
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Probab=46.20 E-value=5.4 Score=39.89 Aligned_cols=16 Identities=31% Similarity=0.522 Sum_probs=14.4
Q ss_pred eEEEEccCCChHHHHH
Q 005003 292 GVLLVGPPGTGKTLLA 307 (720)
Q Consensus 292 gVLL~GPPGTGKT~LA 307 (720)
.++-||+.|+|||+..
T Consensus 82 ti~aYG~tgSGKT~Tm 97 (354)
T d1goja_ 82 TVFAYGQTGAGKSYTM 97 (354)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred eEEecccCCCCcceee
Confidence 5899999999999875
No 288
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=45.98 E-value=13 Score=34.68 Aligned_cols=60 Identities=15% Similarity=0.243 Sum_probs=36.2
Q ss_pred HhcCCeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhhhcCccCCCcEEEEEEeCCCCccchhhcCCCcccceeeec
Q 005003 346 KENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVD 425 (720)
Q Consensus 346 ~~~~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~ldg~~~~~~ViVIaaTN~p~~LD~ALlrpgRFdr~I~i~ 425 (720)
....+.|++|||.+.-. +...++.+.++|..+- ...+ -||.+|+.|+.++ .+|..+.+.
T Consensus 299 ~~~~~~illiDEpe~~L----------h~~~~~~l~~~l~~~~---~~~~-QviitTHs~~~~~-------~~d~~~~v~ 357 (369)
T g1ii8.1 299 LAGEISLLILDEPTPYL----------DEERRRKLITIMERYL---KKIP-QVILVSHDEELKD-------AADHVIRIS 357 (369)
T ss_dssp HHSSCSEEEEECCSSSS----------CSHHHHHHHHHHHHTG---GGSS-EEEEEESCGGGGG-------TSSEEEEEE
T ss_pred cCCCCCEEEEECCCCCC----------CHHHHHHHHHHHHHHH---hcCC-EEEEEechHHHHH-------hCCEEEEEE
Confidence 34567899999998742 4455555555666542 2223 4566788766544 456666554
Q ss_pred C
Q 005003 426 V 426 (720)
Q Consensus 426 ~ 426 (720)
.
T Consensus 358 ~ 358 (369)
T g1ii8.1 358 L 358 (369)
T ss_dssp E
T ss_pred E
Confidence 3
No 289
>d1cy5a_ a.77.1.3 (A:) Apoptotic protease activating factor 1, APAF-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.47 E-value=17 Score=28.66 Aligned_cols=25 Identities=12% Similarity=0.173 Sum_probs=22.3
Q ss_pred HHHHHHHHHHhcccCHHHHHHHHhc
Q 005003 674 IDKIVEVLLEKETMSGDEFRAILSE 698 (720)
Q Consensus 674 l~~la~~Lle~etL~g~ei~~il~~ 698 (720)
.+.+.+.|+++..|+.+|.+.|...
T Consensus 22 ~~~vl~~L~~~~vlt~~e~e~I~~~ 46 (93)
T d1cy5a_ 22 TSYIMDHMISDGFLTISEEEKVRNE 46 (93)
T ss_dssp HHHHHHHHHHHTSSCHHHHHHHHTS
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHcc
Confidence 4789999999999999999999753
No 290
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=42.58 E-value=5.3 Score=39.09 Aligned_cols=21 Identities=33% Similarity=0.358 Sum_probs=18.2
Q ss_pred EEEEccCCChHHHHHHHHHHh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e 313 (720)
++|.|++|+|||+++..++..
T Consensus 71 ~~If~~~g~GKt~ll~~~~~~ 91 (285)
T d2jdia3 71 ELIIGDRQTGKTSIAIDTIIN 91 (285)
T ss_dssp CEEEESTTSSHHHHHHHHHHH
T ss_pred EEeecCCCCChHHHHHHHHHh
Confidence 899999999999998877643
No 291
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=42.45 E-value=11 Score=36.47 Aligned_cols=20 Identities=35% Similarity=0.398 Sum_probs=17.2
Q ss_pred EEEEccCCChHHHHHHHHHH
Q 005003 293 VLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~ 312 (720)
++|.|++|+|||+++..++.
T Consensus 70 ~~Ifg~~g~GKt~l~~~~~~ 89 (276)
T d1fx0a3 70 ELIIGDRQTGKTAVATDTIL 89 (276)
T ss_dssp CBEEESSSSSHHHHHHHHHH
T ss_pred EeeccCCCCChHHHHHHHHh
Confidence 88999999999999876544
No 292
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=42.40 E-value=10 Score=41.42 Aligned_cols=23 Identities=35% Similarity=0.462 Sum_probs=20.2
Q ss_pred ceEEEEccCCChHHHHHHHHHHh
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~e 313 (720)
..|++.|.+|+|||..+|.+-+.
T Consensus 87 QsIiisGeSGsGKTe~~k~il~y 109 (684)
T d1lkxa_ 87 QCVIISGESGAGKTEASKKIMQF 109 (684)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHH
T ss_pred eEEEEEcCCCCCHHHHHHHHHHH
Confidence 37999999999999999988654
No 293
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=42.38 E-value=3.9 Score=39.38 Aligned_cols=31 Identities=35% Similarity=0.553 Sum_probs=22.3
Q ss_pred eEEEEccCCChHHHHHHHHHH----hcCCCEEEEe
Q 005003 292 GVLLVGPPGTGKTLLAKAIAG----EAGVPFFSIS 322 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~----e~g~pf~~vs 322 (720)
-+=|.|-|.+|||||-.++.+ ..+.||.++.
T Consensus 4 ~~GivG~Pn~GKSTlf~~lt~~~~~~~~ypf~ti~ 38 (278)
T d1jala1 4 KCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIE 38 (278)
T ss_dssp EEEEECCTTSSHHHHHHHHHHTC------CCCCCC
T ss_pred eEEEECCCCCCHHHHHHHHHCCCCccccCCCCCCC
Confidence 367899999999999999964 3466777654
No 294
>d1hfca_ d.92.1.11 (A:) Fibroblast collagenase (MMP-1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.29 E-value=4.1 Score=35.10 Aligned_cols=14 Identities=43% Similarity=0.665 Sum_probs=11.7
Q ss_pred ccchhhHHHHHHHH
Q 005003 511 SKSLVAYHEVGHAI 524 (720)
Q Consensus 511 ~k~~vA~hEaGhAv 524 (720)
....+++||+||||
T Consensus 105 ~~~~v~~HEiGHaL 118 (157)
T d1hfca_ 105 NLHRVAAHELGHSL 118 (157)
T ss_dssp BHHHHHHHHHHHHH
T ss_pred hhhhhHhhhhhhhc
Confidence 34568999999999
No 295
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=41.55 E-value=22 Score=33.46 Aligned_cols=49 Identities=18% Similarity=0.260 Sum_probs=32.7
Q ss_pred HhcCCeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhhhcCccCCCcEEEEEEeCCCCccc
Q 005003 346 KENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILD 409 (720)
Q Consensus 346 ~~~~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~ldg~~~~~~ViVIaaTN~p~~LD 409 (720)
....+.+++|||+|.- -++..++.+..++.++. .+.-||.||..|..+|
T Consensus 238 ~~~~~~~~~iDEpe~~----------Lhp~~~~~l~~~l~~~~-----~~~QviitTHsp~~~~ 286 (308)
T d1e69a_ 238 EIKPSPFYVLDEVDSP----------LDDYNAERFKRLLKENS-----KHTQFIVITHNKIVME 286 (308)
T ss_dssp TTSCCSEEEEESCCSS----------CCHHHHHHHHHHHHHHT-----TTSEEEEECCCTTGGG
T ss_pred hhccCchhhhhhcccc----------CCHHHHHHHHHHHHHhc-----cCCEEEEEECCHHHHH
Confidence 3456789999999874 24555556666665542 2345777899888776
No 296
>d1r7ha_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Corynebacterium ammoniagenes [TaxId: 1697]}
Probab=41.25 E-value=34 Score=25.29 Aligned_cols=33 Identities=18% Similarity=0.212 Sum_probs=30.6
Q ss_pred EEEEccCCChHHHHHHHHHHhcCCCEEEEechh
Q 005003 293 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSE 325 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~ 325 (720)
|.+|+-|+|+-..-|+.+-.+.|++|..++..+
T Consensus 3 v~iYt~~~C~~C~~ak~~L~~~~i~~~~~~i~~ 35 (74)
T d1r7ha_ 3 ITLYTKPACVQCTATKKALDRAGLAYNTVDISL 35 (74)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTTCCCEEEETTT
T ss_pred EEEEeCCCChhHHHHHHHHHHcCCceEEEEccC
Confidence 789999999999999999999999999988754
No 297
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=40.63 E-value=12 Score=41.15 Aligned_cols=23 Identities=30% Similarity=0.475 Sum_probs=19.5
Q ss_pred ceEEEEccCCChHHHHHHHHHHh
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~e 313 (720)
..|++.|.+|+|||..+|.+-+.
T Consensus 126 QsIiisGeSGaGKTe~~k~il~y 148 (712)
T d1d0xa2 126 QSLLITGESGAGKTENTKKVIQY 148 (712)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHH
T ss_pred ceEEEeCCCCCCHHHHHHHHHHH
Confidence 38999999999999988887543
No 298
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=40.45 E-value=6.1 Score=39.58 Aligned_cols=25 Identities=20% Similarity=0.433 Sum_probs=22.1
Q ss_pred ceEEEEccCCChHHHHHHHHHHhcC
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAGEAG 315 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~e~g 315 (720)
|+|.+.|..|.|||+|+.++-...|
T Consensus 18 RNI~iiGhvd~GKTTL~d~Ll~~~g 42 (341)
T d1n0ua2 18 RNMSVIAHVDHGKSTLTDSLVQRAG 42 (341)
T ss_dssp EEEEEECCGGGTHHHHHHHHHHHHB
T ss_pred cEEEEEeCCCCcHHHHHHHHHHHCC
Confidence 5899999999999999999976554
No 299
>d1mmqa_ d.92.1.11 (A:) Matrilysin (MMP-7) {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.90 E-value=4.6 Score=35.40 Aligned_cols=12 Identities=42% Similarity=0.733 Sum_probs=10.6
Q ss_pred chhhHHHHHHHH
Q 005003 513 SLVAYHEVGHAI 524 (720)
Q Consensus 513 ~~vA~hEaGhAv 524 (720)
..+++||+||||
T Consensus 115 ~~v~~HEiGHaL 126 (166)
T d1mmqa_ 115 LYAATHELGHSL 126 (166)
T ss_dssp HHHHHHHHHHHH
T ss_pred hhhhhhhhcccc
Confidence 458999999999
No 300
>d1hy7a_ d.92.1.11 (A:) Stromelysin-1 (MMP-3) {Human (Homo sapiens), fibroblast [TaxId: 9606]}
Probab=39.75 E-value=4.7 Score=35.10 Aligned_cols=12 Identities=58% Similarity=0.944 Sum_probs=10.7
Q ss_pred chhhHHHHHHHH
Q 005003 513 SLVAYHEVGHAI 524 (720)
Q Consensus 513 ~~vA~hEaGhAv 524 (720)
..+++||+||||
T Consensus 114 ~~v~~HEiGHAL 125 (168)
T d1hy7a_ 114 FLVAAHEIGHSL 125 (168)
T ss_dssp HHHHHHHHHHHH
T ss_pred eeeeHhhhcccc
Confidence 458999999999
No 301
>d1i76a_ d.92.1.11 (A:) Neutrophil collagenase (MMP-8) {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.74 E-value=4.7 Score=35.20 Aligned_cols=12 Identities=58% Similarity=0.861 Sum_probs=11.0
Q ss_pred chhhHHHHHHHH
Q 005003 513 SLVAYHEVGHAI 524 (720)
Q Consensus 513 ~~vA~hEaGhAv 524 (720)
..+++||+||||
T Consensus 113 ~~v~~HEiGHaL 124 (163)
T d1i76a_ 113 FLVAAHEFGHSL 124 (163)
T ss_dssp HHHHHHHHHHHH
T ss_pred eeehhhhhhhhh
Confidence 569999999999
No 302
>d1dgna_ a.77.1.3 (A:) Iceberg {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.68 E-value=9.7 Score=30.16 Aligned_cols=26 Identities=27% Similarity=0.578 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHhcccCHHHHHHHHhc
Q 005003 673 AIDKIVEVLLEKETMSGDEFRAILSE 698 (720)
Q Consensus 673 ~l~~la~~Lle~etL~g~ei~~il~~ 698 (720)
.++.+.+.|++++.|+.+|.+.|...
T Consensus 20 ~v~~vlD~L~~~~Vlt~~e~e~I~~~ 45 (89)
T d1dgna_ 20 TINALLDCLLEDEVISQEDMNKVRDE 45 (89)
T ss_dssp HHHHHHHHHHHHTCSCHHHHHHHHTC
T ss_pred cHHHHHHHHHHCCCCCHHHHHHHHhc
Confidence 46778889999999999999999854
No 303
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=39.60 E-value=6.3 Score=39.62 Aligned_cols=16 Identities=31% Similarity=0.576 Sum_probs=14.5
Q ss_pred eEEEEccCCChHHHHH
Q 005003 292 GVLLVGPPGTGKTLLA 307 (720)
Q Consensus 292 gVLL~GPPGTGKT~LA 307 (720)
.++-||+.|+|||+..
T Consensus 77 ~i~aYGqTGSGKTyTm 92 (364)
T d1sdma_ 77 CIFAYGQTGSGKTFTI 92 (364)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred eeeccccCCCCccccc
Confidence 6899999999999875
No 304
>d1rm8a_ d.92.1.11 (A:) Matrix metalloproteinase-16 (MMP-16) {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.54 E-value=4.7 Score=34.84 Aligned_cols=13 Identities=62% Similarity=0.846 Sum_probs=11.3
Q ss_pred cchhhHHHHHHHH
Q 005003 512 KSLVAYHEVGHAI 524 (720)
Q Consensus 512 k~~vA~hEaGhAv 524 (720)
...+++||+||||
T Consensus 117 ~~~v~~HEiGHaL 129 (169)
T d1rm8a_ 117 LFLVAVHELGHAL 129 (169)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhh
Confidence 3568999999999
No 305
>d1ku5a_ a.22.1.2 (A:) Archaeal histone {Archaeon (Pyrococcus horikoshii) [TaxId: 53953]}
Probab=39.48 E-value=11 Score=28.14 Aligned_cols=31 Identities=16% Similarity=0.266 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHHhCCCccCHHHHHHHHH
Q 005003 465 DLANLLNEAAILAGRRGKAAISSKEIDDSID 495 (720)
Q Consensus 465 dL~~lv~eAa~~A~r~~~~~It~~dl~~Al~ 495 (720)
=+..++++|...|...++..|+.+|+..|+.
T Consensus 35 Fi~~l~~~a~~~a~~~~RKTI~~~Dv~~Al~ 65 (66)
T d1ku5a_ 35 YAIEIAKKAVEFARHAGRKTVKVEDIKLAIK 65 (66)
T ss_dssp HHHHHHHHHHHHHHTTTCSEECHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCCCCHHHHHHHHh
Confidence 3788999999999999999999999999874
No 306
>d1xuca1 d.92.1.11 (A:104-272) Collagenase-3 (MMP-13) {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.36 E-value=4.8 Score=35.20 Aligned_cols=13 Identities=54% Similarity=0.741 Sum_probs=11.3
Q ss_pred cchhhHHHHHHHH
Q 005003 512 KSLVAYHEVGHAI 524 (720)
Q Consensus 512 k~~vA~hEaGhAv 524 (720)
...+++||+||||
T Consensus 113 ~~~v~~HEiGHaL 125 (169)
T d1xuca1 113 LFLVAAHEFGHSL 125 (169)
T ss_dssp HHHHHHHHHHHHH
T ss_pred eeeehhhhhcccc
Confidence 3568999999999
No 307
>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}
Probab=37.61 E-value=20 Score=31.30 Aligned_cols=57 Identities=21% Similarity=0.393 Sum_probs=40.0
Q ss_pred CceEEEEccCCC-hHHHHHHHHHHh-cCCCEEEEechhhHHHHhhhchHHHHHHHHHHHhcCCeEEEEccc
Q 005003 290 PKGVLLVGPPGT-GKTLLAKAIAGE-AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEI 358 (720)
Q Consensus 290 prgVLL~GPPGT-GKT~LArAlA~e-~g~pf~~vs~s~~~~~~~G~~~~~vr~lF~~A~~~~P~ILfIDEI 358 (720)
||.|.+.|..|+ |+++| .-+.+. -...++.++|. +.+..+.+++++..|..+++.+-
T Consensus 2 pK~I~IlGsTGSIG~~tL-~Vi~~~~d~f~v~~lsa~-----------~N~~~L~~q~~ef~Pk~v~i~d~ 60 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTL-DLIERNLDRYQVIALTAN-----------RNVKDLADAAKRTNAKRAVIADP 60 (150)
T ss_dssp CEEEEEETTTSHHHHHHH-HHHHHTGGGEEEEEEEES-----------SCHHHHHHHHHHTTCSEEEESCG
T ss_pred CcEEEEECCCcHHHHHHH-HHHHcCCCCcEEEEEEeC-----------CCHHHHHHHHHhhccccceeccH
Confidence 789999999997 66655 344332 23555666654 34567889999999988887764
No 308
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]}
Probab=37.54 E-value=8.4 Score=38.18 Aligned_cols=17 Identities=35% Similarity=0.604 Sum_probs=14.9
Q ss_pred eEEEEccCCChHHHHHH
Q 005003 292 GVLLVGPPGTGKTLLAK 308 (720)
Q Consensus 292 gVLL~GPPGTGKT~LAr 308 (720)
.++-||+.|+|||+...
T Consensus 83 ~i~aYGqtgSGKTyTm~ 99 (345)
T d1x88a1 83 TIFAYGQTGTGKTFTME 99 (345)
T ss_dssp EEEEEECTTSSHHHHHT
T ss_pred eEEeeeeccccceEEee
Confidence 68999999999998763
No 309
>d1qiba_ d.92.1.11 (A:) Gelatinase A {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.46 E-value=5.4 Score=34.36 Aligned_cols=13 Identities=62% Similarity=0.767 Sum_probs=11.1
Q ss_pred cchhhHHHHHHHH
Q 005003 512 KSLVAYHEVGHAI 524 (720)
Q Consensus 512 k~~vA~hEaGhAv 524 (720)
...+++||+||||
T Consensus 109 ~~~~~~HEiGHaL 121 (161)
T d1qiba_ 109 LFLVAAHEFGHAM 121 (161)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hheeeeecccccc
Confidence 3458999999999
No 310
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=37.43 E-value=14 Score=40.57 Aligned_cols=24 Identities=29% Similarity=0.440 Sum_probs=20.1
Q ss_pred CceEEEEccCCChHHHHHHHHHHh
Q 005003 290 PKGVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 290 prgVLL~GPPGTGKT~LArAlA~e 313 (720)
+..|++.|.+|+|||..++.+-+.
T Consensus 94 ~Q~IiisGeSGsGKTe~~k~il~~ 117 (730)
T d1w7ja2 94 NQSIIVSGESGAGKTVSAKYAMRY 117 (730)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHH
Confidence 348999999999999988887553
No 311
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=37.33 E-value=13 Score=41.22 Aligned_cols=22 Identities=32% Similarity=0.623 Sum_probs=18.2
Q ss_pred ceEEEEccCCChHHHHHHHHHH
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~ 312 (720)
..|++.|.+|+|||.-+|.+-+
T Consensus 124 QsIiisGeSGaGKTe~~K~il~ 145 (794)
T d2mysa2 124 QSILITGESGAGKTVNTKRVIQ 145 (794)
T ss_dssp EEEEEEECTTSCHHHHHHHHHH
T ss_pred cEEEEEcCCCCCHHHHHHHHHH
Confidence 3799999999999977776543
No 312
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=36.96 E-value=12 Score=41.43 Aligned_cols=22 Identities=32% Similarity=0.472 Sum_probs=18.7
Q ss_pred ceEEEEccCCChHHHHHHHHHH
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~ 312 (720)
..|++.|.+|+|||..+|.+-+
T Consensus 122 Q~IiisGESGaGKTe~~K~il~ 143 (789)
T d1kk8a2 122 QSCLITGESGAGKTENTKKVIM 143 (789)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHH
Confidence 3899999999999988777744
No 313
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=36.77 E-value=15 Score=40.29 Aligned_cols=23 Identities=30% Similarity=0.432 Sum_probs=19.6
Q ss_pred ceEEEEccCCChHHHHHHHHHHh
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAGE 313 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~e 313 (720)
..|++.|.+|+|||.-+|.+-+.
T Consensus 92 Q~IiisGeSGaGKTe~~k~il~y 114 (710)
T d1br2a2 92 QSILCTGESGAGKTENTKKVIQY 114 (710)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHH
Confidence 48999999999999988887543
No 314
>d1y93a1 d.92.1.11 (A:106-263) Macrophage elastase (MMP-12) {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.71 E-value=4.7 Score=34.68 Aligned_cols=13 Identities=46% Similarity=0.759 Sum_probs=11.3
Q ss_pred cchhhHHHHHHHH
Q 005003 512 KSLVAYHEVGHAI 524 (720)
Q Consensus 512 k~~vA~hEaGhAv 524 (720)
...+++||+||||
T Consensus 107 ~~~~~~HEiGHaL 119 (158)
T d1y93a1 107 LFLTAVHEIGHSL 119 (158)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHhhhhhhhhc
Confidence 4568999999998
No 315
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=36.36 E-value=13 Score=36.47 Aligned_cols=50 Identities=14% Similarity=0.216 Sum_probs=30.8
Q ss_pred hcCCeEEEEccchhcccccCCCCCCCChHHHHHHHHHHhhhcCccCCCcEEEEEEeCCCCccch
Q 005003 347 ENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDS 410 (720)
Q Consensus 347 ~~~P~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~ldg~~~~~~ViVIaaTN~p~~LD~ 410 (720)
...+.+++|||+|.-. +....+.+..+|..+. ..+.-+|.+|+.|..++.
T Consensus 352 ~~~~pililDE~d~~L----------d~~~~~~~~~~l~~~~----~~~~Q~I~iTH~~~~~~~ 401 (427)
T d1w1wa_ 352 YQPSPFFVLDEVDAAL----------DITNVQRIAAYIRRHR----NPDLQFIVISLKNTMFEK 401 (427)
T ss_dssp SSCCSEEEESSTTTTC----------CHHHHHHHHHHHHHHC----BTTBEEEEECSCHHHHTT
T ss_pred CCCCCEEEEeCCCCCC----------CHHHHHHHHHHHHHHh----CCCCEEEEEeCCHHHHHh
Confidence 3445599999999842 3444555556665542 123467888987765543
No 316
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=35.56 E-value=7.5 Score=39.13 Aligned_cols=22 Identities=32% Similarity=0.338 Sum_probs=15.9
Q ss_pred ceEEEEccCCChHHHH-HHHHHH
Q 005003 291 KGVLLVGPPGTGKTLL-AKAIAG 312 (720)
Q Consensus 291 rgVLL~GPPGTGKT~L-ArAlA~ 312 (720)
..+|+.+.+|||||+. +..++.
T Consensus 17 g~~lv~A~AGsGKT~~l~~r~~~ 39 (485)
T d1w36b1 17 GERLIEASAGTGKTFTIAALYLR 39 (485)
T ss_dssp SCEEEECCTTSCHHHHHHHHHHH
T ss_pred CCeEEEEcCchHHHHHHHHHHHH
Confidence 4578899999999964 344443
No 317
>d1hv5a_ d.92.1.11 (A:) Stromelysin-3 (MMP-11) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=35.23 E-value=5.1 Score=35.13 Aligned_cols=12 Identities=50% Similarity=0.697 Sum_probs=10.7
Q ss_pred chhhHHHHHHHH
Q 005003 513 SLVAYHEVGHAI 524 (720)
Q Consensus 513 ~~vA~hEaGhAv 524 (720)
..+++||+|||+
T Consensus 114 ~~v~~HEiGHaL 125 (162)
T d1hv5a_ 114 LQVAAHEFGHVL 125 (162)
T ss_dssp HHHHHHHHHHHT
T ss_pred hhhhhhhhhhhc
Confidence 458999999998
No 318
>d2ovxa1 d.92.1.11 (A:110-443) Gelatinase B (MMP-9) {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.86 E-value=5.3 Score=34.51 Aligned_cols=12 Identities=58% Similarity=0.844 Sum_probs=10.7
Q ss_pred chhhHHHHHHHH
Q 005003 513 SLVAYHEVGHAI 524 (720)
Q Consensus 513 ~~vA~hEaGhAv 524 (720)
..+++||+||||
T Consensus 112 ~~v~~HElGHaL 123 (159)
T d2ovxa1 112 FLVAAHQFGHAL 123 (159)
T ss_dssp HHHHHHHHHHHT
T ss_pred eeeehhhhcccc
Confidence 458999999998
No 319
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=34.67 E-value=8.4 Score=38.70 Aligned_cols=16 Identities=31% Similarity=0.536 Sum_probs=14.4
Q ss_pred eEEEEccCCChHHHHH
Q 005003 292 GVLLVGPPGTGKTLLA 307 (720)
Q Consensus 292 gVLL~GPPGTGKT~LA 307 (720)
.++-||+.|+|||+..
T Consensus 127 ti~aYGqtGSGKT~Tm 142 (368)
T d2ncda_ 127 CIFAYGQTGSGKTYTM 142 (368)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred eEEeeccCCCccceEe
Confidence 6899999999999875
No 320
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=34.36 E-value=39 Score=34.44 Aligned_cols=83 Identities=27% Similarity=0.323 Sum_probs=58.1
Q ss_pred eEEEEccchhcccccCCCCCCCChHHHHHHHHHHhhhcCcc--------CCCcEEEEEEeCC----CCccchhhcCCCcc
Q 005003 351 CIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFE--------GNTGIIVIAATNR----ADILDSALLRPGRF 418 (720)
Q Consensus 351 ~ILfIDEID~l~~~r~~~~~~~~~e~~~~ln~LL~~ldg~~--------~~~~ViVIaaTN~----p~~LD~ALlrpgRF 418 (720)
.++|+||+|........ .+.....+.....++..+++.. ....+.+|+++.. +..+-|.|.- ||
T Consensus 251 ~~~~~dei~k~~~~~~~--~g~d~~~eg~~~~ll~~~e~~~v~~~~~~~~~~~~l~i~~~~~~~~~~~gliPEliG--Rl 326 (443)
T d1g41a_ 251 GIVFIDEIDKICKKGEY--SGADVSREGVQRDLLPLVEGSTVSTKHGMVKTDHILFIASGAFQVARPSDLIPELQG--RL 326 (443)
T ss_dssp CEEEEETGGGGSCCSSC--SSSHHHHHHHHHHHHHHHHCCEEEETTEEEECTTCEEEEEECCSSCCGGGSCHHHHT--TC
T ss_pred CccccchhhhhhhcccC--CCCCcccchhhhhhhhhccccccccccccccccchhhccccchhhcccccchhhhcc--ce
Confidence 59999999999765443 2333445556666777665532 2345677777643 3356677775 99
Q ss_pred cceeeecCCCHHHHHHHHH
Q 005003 419 DRQVTVDVPDIRGRTEILK 437 (720)
Q Consensus 419 dr~I~i~~Pd~~eR~~IL~ 437 (720)
...+.+...+.++..+||.
T Consensus 327 Pi~v~L~~L~~~dL~rILt 345 (443)
T d1g41a_ 327 PIRVELTALSAADFERILT 345 (443)
T ss_dssp CEEEECCCCCHHHHHHHHH
T ss_pred EEEEEccCccHHHHHHHHH
Confidence 9999999999999988885
No 321
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.27 E-value=10 Score=36.55 Aligned_cols=23 Identities=39% Similarity=0.514 Sum_probs=19.6
Q ss_pred eEEEEccCCChHHHHHHHHHHhc
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEA 314 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~ 314 (720)
-|-+.||.+||||+|+..+++..
T Consensus 34 vvsi~G~~~sGKS~llN~l~~~~ 56 (277)
T d1f5na2 34 VVAIVGLYRTGKSYLMNKLAGKK 56 (277)
T ss_dssp EEEEEEBTTSSHHHHHHHHTTCS
T ss_pred EEEEECCCCCCHHHHHHHHcCCC
Confidence 46788999999999999997643
No 322
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=33.38 E-value=11 Score=33.94 Aligned_cols=24 Identities=38% Similarity=0.462 Sum_probs=21.0
Q ss_pred CCceEEEEccCCChHHHHHHHHHH
Q 005003 289 IPKGVLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 289 ~prgVLL~GPPGTGKT~LArAlA~ 312 (720)
+.-+|.+.|....|||||+.+|.+
T Consensus 7 p~ini~iiGhVd~GKSTL~~~L~~ 30 (205)
T d2qn6a3 7 PEVNIGVVGHVDHGKTTLVQAITG 30 (205)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHS
T ss_pred CCeEEEEEEccCCcHHHHHHHHHh
Confidence 345899999999999999999975
No 323
>d2huec1 a.22.1.1 (C:20-101) Histone H4 {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=33.38 E-value=12 Score=29.55 Aligned_cols=32 Identities=13% Similarity=0.292 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHhCCCccCHHHHHHHHHH
Q 005003 465 DLANLLNEAAILAGRRGKAAISSKEIDDSIDR 496 (720)
Q Consensus 465 dL~~lv~eAa~~A~r~~~~~It~~dl~~Al~~ 496 (720)
-++.++++|...+...++..|+.+|+..|+.+
T Consensus 42 ~l~~i~~~a~~~~~hakRKTvt~~DV~~Alkr 73 (82)
T d2huec1 42 FLENVIRDAVTYTEHAKRKTVTAMDVVYALKR 73 (82)
T ss_dssp HHHHHHHHHHHHHHHTTCSEECHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHh
Confidence 47789999999999999999999999999864
No 324
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=32.62 E-value=14 Score=35.49 Aligned_cols=37 Identities=16% Similarity=0.220 Sum_probs=24.0
Q ss_pred eEEEEccCCChHHHHHHHHHHhc----CCCEEEE-echhhHH
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEA----GVPFFSI-SGSEFVE 328 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~----g~pf~~v-s~s~~~~ 328 (720)
..++.-|.|+|||.++-+++... +.+.+.+ ...++++
T Consensus 130 ~~il~~pTGsGKT~i~~~i~~~~~~~~~~k~Liivp~~~Lv~ 171 (282)
T d1rifa_ 130 RRILNLPTSAGRSLIQALLARYYLENYEGKILIIVPTTALTT 171 (282)
T ss_dssp EEEECCCTTSCHHHHHHHHHHHHHHHCSSEEEEECSSHHHHH
T ss_pred CceeEEEcccCccHHHHHHHHHhhhcccceEEEEEcCchhHH
Confidence 35777799999999888777432 3444444 4445554
No 325
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=32.12 E-value=9.2 Score=37.66 Aligned_cols=17 Identities=29% Similarity=0.450 Sum_probs=14.9
Q ss_pred eEEEEccCCChHHHHHH
Q 005003 292 GVLLVGPPGTGKTLLAK 308 (720)
Q Consensus 292 gVLL~GPPGTGKT~LAr 308 (720)
.|+-||..|+|||+..-
T Consensus 87 ~i~aYGqTGSGKTyTm~ 103 (330)
T d1ry6a_ 87 SCFAYGQTGSGKTYTML 103 (330)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEeeeccccccceeee
Confidence 58999999999998854
No 326
>d2axpa1 c.37.1.1 (A:2-165) Hypothetical protein YorR {Bacillus subtilis [TaxId: 1423]}
Probab=31.01 E-value=68 Score=26.35 Aligned_cols=60 Identities=23% Similarity=0.371 Sum_probs=40.2
Q ss_pred EEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHHHHhhhchHHHHHHHHHHHhcCCeEEEEccc
Q 005003 293 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEI 358 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~~~~G~~~~~vr~lF~~A~~~~P~ILfIDEI 358 (720)
++|.||--|=|++.|..+..++..|++.-+.-++.. .+...+-+-|....... -++||-+
T Consensus 3 iilegpdccfkstvaaklskelkypiikgssfelak----sgneklfehfnkladed--nviidrf 62 (164)
T d2axpa1 3 IILEGPDCCFKSTVAAKLSKELKYPIIKGSSFELAK----SGNEKLFEHFNKLADED--NVIIDRF 62 (164)
T ss_dssp EEEECCSSSCHHHHHHHHHHHHTCCEEECCCHHHHH----HCHHHHHHHHHHHTTCC--SEEEESC
T ss_pred EEEeCCchhhHHHHHHHHHhhhcCceecCchhhhhh----ccCHHHHHHHHhhcccc--ceeeehh
Confidence 788999999999999999999999998765544332 23344444454443322 2445654
No 327
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=30.40 E-value=12 Score=33.99 Aligned_cols=22 Identities=36% Similarity=0.366 Sum_probs=19.8
Q ss_pred ceEEEEccCCChHHHHHHHHHH
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~ 312 (720)
-+|.+.|-++.|||+|+.+|..
T Consensus 4 ini~iiGHvd~GKSTL~~~l~~ 25 (196)
T d1d2ea3 4 VNVGTIGHVDHGKTTLTAAITK 25 (196)
T ss_dssp EEEEEESSTTSSHHHHHHHHHH
T ss_pred cEEEEEeCCCCcHHHHHHHHHH
Confidence 4789999999999999999964
No 328
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal (G) domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=29.72 E-value=13 Score=34.14 Aligned_cols=26 Identities=19% Similarity=0.394 Sum_probs=22.4
Q ss_pred ceEEEEccCCChHHHHHHHHHHhcCC
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAGEAGV 316 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~e~g~ 316 (720)
-+|.+.|--+.|||+|+.+|....|.
T Consensus 4 iNi~viGHVd~GKTTL~~~Ll~~~g~ 29 (224)
T d1jnya3 4 LNLIVIGHVDHGKSTLVGRLLMDRGF 29 (224)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHHBC
T ss_pred cEEEEEecCCCCHHHHHHHHHHHcCC
Confidence 47899999999999999999766653
No 329
>d2bykb1 a.22.1.3 (B:11-99) Chrac-14 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=29.58 E-value=30 Score=27.27 Aligned_cols=32 Identities=16% Similarity=0.301 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHhCCCccCHHHHHHHHHHH
Q 005003 466 LANLLNEAAILAGRRGKAAISSKEIDDSIDRI 497 (720)
Q Consensus 466 L~~lv~eAa~~A~r~~~~~It~~dl~~Al~~v 497 (720)
|..+..+|...|...++..|+.+|+..|++..
T Consensus 35 I~~lt~~A~~~a~~~~rKtI~~~dv~~Al~~~ 66 (89)
T d2bykb1 35 AIFVTSSSTALAHKQNHKTITAKDILQTLTEL 66 (89)
T ss_dssp HHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCCccCHHHHHHHHHHC
Confidence 67788899999999999999999999999874
No 330
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release factor ERF2, G domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=29.55 E-value=14 Score=34.72 Aligned_cols=28 Identities=21% Similarity=0.324 Sum_probs=23.0
Q ss_pred cCCceEEEEccCCChHHHHHHHHHHhcC
Q 005003 288 RIPKGVLLVGPPGTGKTLLAKAIAGEAG 315 (720)
Q Consensus 288 ~~prgVLL~GPPGTGKT~LArAlA~e~g 315 (720)
++..+|.+.|-.+.|||+|+.+|....|
T Consensus 22 k~~iNi~iiGHVD~GKSTL~~~Ll~~~g 49 (245)
T d1r5ba3 22 KEHVNIVFIGHVDAGKSTLGGNILFLTG 49 (245)
T ss_dssp CEEEEEEEEECGGGTHHHHHHHHHHHTT
T ss_pred CCceEEEEEeeCCCCHHHHHHHHHHHcC
Confidence 3344799999999999999999976555
No 331
>d1n1ja_ a.22.1.3 (A:) Nuclear transcription factor Y subunit beta (Nf-Yb3) {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.15 E-value=33 Score=26.85 Aligned_cols=32 Identities=13% Similarity=0.206 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHhCCCccCHHHHHHHHHHH
Q 005003 466 LANLLNEAAILAGRRGKAAISSKEIDDSIDRI 497 (720)
Q Consensus 466 L~~lv~eAa~~A~r~~~~~It~~dl~~Al~~v 497 (720)
+..+..+|...|...++..|+.+|+..|++..
T Consensus 38 i~~lt~~A~~~a~~~~rKTI~~~dv~~Al~~~ 69 (87)
T d1n1ja_ 38 ISFITSEASERCHQEKRKTINGEDILFAMSTL 69 (87)
T ss_dssp HHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHc
Confidence 56788899999999999999999999999874
No 332
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]}
Probab=28.80 E-value=11 Score=37.27 Aligned_cols=41 Identities=24% Similarity=0.407 Sum_probs=26.8
Q ss_pred eEEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHHHHhhhchHHHHHHHHHHHh
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKE 347 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~~~~G~~~~~vr~lF~~A~~ 347 (720)
.|+-||..|+|||+..- |-+ + ..-.|.....+..+|.....
T Consensus 89 ti~aYGqTgSGKT~Tm~------G~~-------~--~~~~Glipr~l~~lf~~~~~ 129 (349)
T d2zfia1 89 CIFAYGQTGAGKSYTMM------GKQ-------E--KDQQGIIPQLCEDLFSRIND 129 (349)
T ss_dssp EEEEECSTTSSHHHHHT------BCS-------G--GGCBCHHHHHHHHHHHHHHT
T ss_pred eeeeeccCCCCCceeec------cCc-------c--ccccCchHHHHhhhhhhccc
Confidence 69999999999998741 110 0 01135556677888877653
No 333
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]}
Probab=28.34 E-value=11 Score=37.64 Aligned_cols=16 Identities=31% Similarity=0.451 Sum_probs=14.4
Q ss_pred eEEEEccCCChHHHHH
Q 005003 292 GVLLVGPPGTGKTLLA 307 (720)
Q Consensus 292 gVLL~GPPGTGKT~LA 307 (720)
.++-||..|+|||+..
T Consensus 116 tifaYGqTGSGKTyTm 131 (362)
T d1v8ka_ 116 TCFAYGQTGSGKTHTM 131 (362)
T ss_dssp EEEEEESTTSSHHHHH
T ss_pred eEEeeccCCCCCceee
Confidence 5888999999999885
No 334
>d1tafb_ a.22.1.3 (B:) TAF(II)62 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=27.41 E-value=36 Score=25.92 Aligned_cols=31 Identities=23% Similarity=0.414 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHhCCCccCHHHHHHHHH
Q 005003 465 DLANLLNEAAILAGRRGKAAISSKEIDDSID 495 (720)
Q Consensus 465 dL~~lv~eAa~~A~r~~~~~It~~dl~~Al~ 495 (720)
-|..++++|........+..+|.+|+..|+.
T Consensus 39 Rl~eiiQeA~KFMrhskR~~Ltt~Did~ALk 69 (70)
T d1tafb_ 39 KLKRIVQDAAKFMNHAKRQKLSVRDIDMSLK 69 (70)
T ss_dssp HHHHHHHHHHHHHHHTTCSSBCHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhccCcCcHHHHHHHHc
Confidence 4789999999999888889999999999873
No 335
>d1kapp2 d.92.1.6 (P:1-246) Metalloprotease {Pseudomonas aeruginosa [TaxId: 287]}
Probab=26.43 E-value=10 Score=35.66 Aligned_cols=12 Identities=33% Similarity=0.661 Sum_probs=10.6
Q ss_pred chhhHHHHHHHH
Q 005003 513 SLVAYHEVGHAI 524 (720)
Q Consensus 513 ~~vA~hEaGhAv 524 (720)
..+++||+||||
T Consensus 171 ~~t~lHEIGHaL 182 (246)
T d1kapp2 171 RQTLTHEIGHTL 182 (246)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 458999999999
No 336
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=26.30 E-value=20 Score=33.17 Aligned_cols=25 Identities=20% Similarity=0.292 Sum_probs=21.7
Q ss_pred eEEEEccCCChHHHHHHHHHHhcCC
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEAGV 316 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~g~ 316 (720)
.+.+.|-+..|||||+.+|....+.
T Consensus 11 ~i~viGHVd~GKSTL~~~Ll~~~g~ 35 (222)
T d1zunb3 11 RFLTCGNVDDGKSTLIGRLLHDSKM 35 (222)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHTTC
T ss_pred eEEEEcCCCCCHHHHHHHHHHHcCC
Confidence 4889999999999999999877653
No 337
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.18 E-value=20 Score=33.51 Aligned_cols=26 Identities=19% Similarity=0.311 Sum_probs=22.6
Q ss_pred ceEEEEccCCChHHHHHHHHHHhcCC
Q 005003 291 KGVLLVGPPGTGKTLLAKAIAGEAGV 316 (720)
Q Consensus 291 rgVLL~GPPGTGKT~LArAlA~e~g~ 316 (720)
-+|.+.|-.+.|||||+.++.-.+|.
T Consensus 7 iNi~iiGHvD~GKsTl~~~ll~~~g~ 32 (239)
T d1f60a3 7 INVVVIGHVDSGKSTTTGHLIYKCGG 32 (239)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHSC
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHcCC
Confidence 38999999999999999999876653
No 338
>d1fova_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli, Grx3 [TaxId: 562]}
Probab=25.02 E-value=98 Score=23.02 Aligned_cols=34 Identities=21% Similarity=0.137 Sum_probs=30.9
Q ss_pred eEEEEccCCChHHHHHHHHHHhcCCCEEEEechh
Q 005003 292 GVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSE 325 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~ 325 (720)
.|-+|+-|+|+=..-|+.+..+.+++|..++.++
T Consensus 2 ~I~iys~~~Cp~C~~ak~~L~~~~i~y~~~di~~ 35 (82)
T d1fova_ 2 NVEIYTKETCPYCHRAKALLSSKGVSFQELPIDG 35 (82)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHTCCCEEEECTT
T ss_pred cEEEEeCCCCHhHHHHHHHHHHcCCCeEEEeccc
Confidence 4889999999999999999999999999998754
No 339
>d1n1jb_ a.22.1.3 (B:) Nuclear transcription factor Y subunit gamma (Nf-Yc2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.74 E-value=34 Score=26.04 Aligned_cols=31 Identities=16% Similarity=0.233 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHhCCCccCHHHHHHHHHH
Q 005003 466 LANLLNEAAILAGRRGKAAISSKEIDDSIDR 496 (720)
Q Consensus 466 L~~lv~eAa~~A~r~~~~~It~~dl~~Al~~ 496 (720)
+..++++|...|.+.++..|+.+|+..|+..
T Consensus 35 i~~l~~~A~~~a~~~~rkti~~~dl~~av~~ 65 (78)
T d1n1jb_ 35 ITELTLRAWIHTEDNKRRTLQRNDIAMAITK 65 (78)
T ss_dssp HHHHHHHHHHHHHHTTCSEECHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCcCCHHHHHHHHhc
Confidence 6788899999999999999999999999854
No 340
>d1g9ka2 d.92.1.6 (A:3-244) Metalloprotease {Pseudomonas sp., tac ii 18 [TaxId: 306]}
Probab=24.64 E-value=12 Score=35.05 Aligned_cols=13 Identities=31% Similarity=0.583 Sum_probs=11.1
Q ss_pred cchhhHHHHHHHH
Q 005003 512 KSLVAYHEVGHAI 524 (720)
Q Consensus 512 k~~vA~hEaGhAv 524 (720)
-..+++||+||||
T Consensus 161 ~~~t~~HEIGHaL 173 (242)
T d1g9ka2 161 GRQTLTHEIGHTL 173 (242)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhh
Confidence 3468999999999
No 341
>d1h3ob_ a.22.1.3 (B:) TAF(II)-20, (TAF(II)-15, hTAF12), histone fold domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.42 E-value=56 Score=25.04 Aligned_cols=64 Identities=16% Similarity=0.310 Sum_probs=43.4
Q ss_pred HHHHHHHHHHhhcCCCCcccccHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhCCCccCHHHHHHHHHHH
Q 005003 429 IRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAILAGRRGKAAISSKEIDDSIDRI 497 (720)
Q Consensus 429 ~~eR~~IL~~~l~~~~l~~dvdl~~LA~~t~G~SgadL~~lv~eAa~~A~r~~~~~It~~dl~~Al~~v 497 (720)
.....++++..-....+++++. +.+....+ .=+.+++..|+.+|..|+...++..|+.-.++|.
T Consensus 6 K~~L~eLv~~idp~~~ld~~ve-e~ll~iAD----dFV~~V~~~ac~lAKhR~s~~le~kDvql~LeR~ 69 (74)
T d1h3ob_ 6 KKKLQDLVREVDPNEQLDEDVE-EMLLQIAD----DFIESVVTAACQLARHRKSSTLEVKDVQLHLERQ 69 (74)
T ss_dssp HHHHHHHHHHHCSSCCCCHHHH-HHHHHHHH----HHHHHHHHHHHHHHHHTTCCEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCHHHH-HHHHHHHH----HHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHhh
Confidence 3444556666655555554432 22333222 2377899999999999999999999999988874
No 342
>d1sata2 d.92.1.6 (A:4-246) Metalloprotease {Serratia marcescens [TaxId: 615]}
Probab=23.60 E-value=13 Score=34.99 Aligned_cols=12 Identities=42% Similarity=0.681 Sum_probs=10.4
Q ss_pred chhhHHHHHHHH
Q 005003 513 SLVAYHEVGHAI 524 (720)
Q Consensus 513 ~~vA~hEaGhAv 524 (720)
..+++||+||||
T Consensus 168 ~~t~lHEIGHaL 179 (243)
T d1sata2 168 RQTFTHEIGHAL 179 (243)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 457899999998
No 343
>d1k7ia2 d.92.1.6 (A:18-258) Metalloprotease {Erwinia chrysanthemi [TaxId: 556]}
Probab=23.48 E-value=13 Score=34.91 Aligned_cols=12 Identities=42% Similarity=0.681 Sum_probs=10.4
Q ss_pred chhhHHHHHHHH
Q 005003 513 SLVAYHEVGHAI 524 (720)
Q Consensus 513 ~~vA~hEaGhAv 524 (720)
..+++||+||||
T Consensus 166 ~~t~~HEIGHaL 177 (241)
T d1k7ia2 166 RQTFTHEIGHAL 177 (241)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 357899999998
No 344
>d1k6ka_ a.174.1.1 (A:) N-terminal, ClpS-binding domain of ClpA, an Hsp100 chaperone {Escherichia coli [TaxId: 562]}
Probab=23.16 E-value=34 Score=28.43 Aligned_cols=31 Identities=16% Similarity=0.081 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCccCHHHHHHHH
Q 005003 464 ADLANLLNEAAILAGRRGKAAISSKEIDDSI 494 (720)
Q Consensus 464 adL~~lv~eAa~~A~r~~~~~It~~dl~~Al 494 (720)
.+++.++++|...|.+.+...|+.+|+..|+
T Consensus 4 ~~l~~~l~~A~~~A~~~~h~~i~~EHLL~aL 34 (142)
T d1k6ka_ 4 QELELSLNMAFARAREHRHEFMTVEHLLLAL 34 (142)
T ss_dssp HHHHHHHHHHHHHHHHHTBSEECHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCcccHHHHHHHH
Confidence 3688999999999999999999999999887
No 345
>d1f1ea_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=23.06 E-value=37 Score=29.45 Aligned_cols=64 Identities=17% Similarity=0.223 Sum_probs=43.3
Q ss_pred HHHHHHHHHhhcCCCCcccccHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhCCCccCHHHHHHHHHHHHc
Q 005003 430 RGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAILAGRRGKAAISSKEIDDSIDRIVA 499 (720)
Q Consensus 430 ~eR~~IL~~~l~~~~l~~dvdl~~LA~~t~G~SgadL~~lv~eAa~~A~r~~~~~It~~dl~~Al~~v~~ 499 (720)
.--++|++.. ....+..+. ...++..+. .=+..++++|...|...++..|+.+|+..|+....+
T Consensus 83 a~IkRi~k~~-g~~ris~dA-~~~l~~~~E----~fi~~l~~~A~~~a~~~kRkTI~~~DI~~Av~~~~~ 146 (151)
T d1f1ea_ 83 ATVRRILKRA-GIERASSDA-VDLYNKLIC----RATEELGEKAAEYADEDGRKTVQGEDVEKAITYSMP 146 (151)
T ss_dssp HHHHHHHHHT-TCCEECHHH-HHHHHHHHH----HHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHHSG
T ss_pred HHHHHHHHcC-CcchhhHHH-HHHHHHHHH----HHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHHcCC
Confidence 4445666642 233333332 444444333 236789999999999999999999999999988765
No 346
>d1rw1a_ c.47.1.12 (A:) Hypothetical protein PA3664 (YffB) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=22.70 E-value=82 Score=25.34 Aligned_cols=47 Identities=17% Similarity=0.156 Sum_probs=35.9
Q ss_pred EEEEccCCChHHHHHHHHHHhcCCCEEEEechhhHHHHhhhchHHHHHHHHH
Q 005003 293 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKK 344 (720)
Q Consensus 293 VLL~GPPGTGKT~LArAlA~e~g~pf~~vs~s~~~~~~~G~~~~~vr~lF~~ 344 (720)
+.|||-|.|+|+-=|..+-.+.|++|-.++.-+ .+-+...+..++..
T Consensus 2 ~~iY~~p~Cs~srka~~~L~~~~i~~~~idy~k-----~pls~~eL~~ll~~ 48 (114)
T d1rw1a_ 2 YVLYGIKACDTMKKARTWLDEHKVAYDFHDYKA-----VGIDREHLRRWCAE 48 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCEEEEEHHH-----HCCCHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHcCCCeEEEEccc-----cCCCHHHHHHHHHh
Confidence 689999999999999999999999999887533 12334455555543
No 347
>d1kjwa2 c.37.1.1 (A:526-724) Guanylate kinase-like domain of Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=21.62 E-value=30 Score=31.07 Aligned_cols=25 Identities=16% Similarity=0.352 Sum_probs=20.8
Q ss_pred cCCceEEEEccCCChHHHHHHHHHHhcC
Q 005003 288 RIPKGVLLVGPPGTGKTLLAKAIAGEAG 315 (720)
Q Consensus 288 ~~prgVLL~GPPGTGKT~LArAlA~e~g 315 (720)
.-+|.|+|.|| ||+++.+.|..+..
T Consensus 7 ~~~Rpivi~Gp---~K~ti~~~L~~~~p 31 (199)
T d1kjwa2 7 HYARPIIILGP---TKDRANDDLLSEFP 31 (199)
T ss_dssp CSCCCEEEEST---THHHHHHHHHHHCT
T ss_pred CCCCCEEEECc---CHHHHHHHHHHhCc
Confidence 34678999998 59999999998754
No 348
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Probab=21.21 E-value=24 Score=31.19 Aligned_cols=21 Identities=43% Similarity=0.635 Sum_probs=19.3
Q ss_pred eEEEEccCCChHHHHHHHHHH
Q 005003 292 GVLLVGPPGTGKTLLAKAIAG 312 (720)
Q Consensus 292 gVLL~GPPGTGKT~LArAlA~ 312 (720)
+|-+.|-+..|||||+.+|.+
T Consensus 7 nIaiiGhvd~GKSTL~~~L~g 27 (195)
T d1kk1a3 7 NIGMVGHVDHGKTTLTKALTG 27 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHT
T ss_pred EEEEEeccCCcHHHHHHHHHh
Confidence 689999999999999999965
No 349
>d1jfib_ a.22.1.3 (B:) Negative cofactor 2, NC2, beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.06 E-value=58 Score=27.60 Aligned_cols=61 Identities=13% Similarity=0.204 Sum_probs=41.4
Q ss_pred HHHHHHHhhcCCCCcccccHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhCCCccCHHHHHHHHHHH
Q 005003 432 RTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAILAGRRGKAAISSKEIDDSIDRI 497 (720)
Q Consensus 432 R~~IL~~~l~~~~l~~dvdl~~LA~~t~G~SgadL~~lv~eAa~~A~r~~~~~It~~dl~~Al~~v 497 (720)
..+|++.-+....+..+. ...+++.+. -=|..+..+|...|...++..|+.+|+..|++.+
T Consensus 10 I~kI~K~~~~~~~is~dA-~~~i~~a~~----~Fi~~lt~~A~~~a~~~~RkTi~~~Dv~~Al~~~ 70 (135)
T d1jfib_ 10 INKMIKETLPNVRVANDA-RELVVNCCT----EFIHLISSEANEICNKSEKKTISPEHVIQALESL 70 (135)
T ss_dssp HHHHHHHHSTTCCBCHHH-HHHHHHHHH----HHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHH
T ss_pred HHHHHhhCCccchhhHHH-HHHHHHHHH----HHHHHHHHHHHHHHHHhCCCcccHHHHHHHHHHc
Confidence 446666665543443331 233333322 2366788899999999999999999999999875
Done!