BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005008
(719 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6P2B1|TNPO3_MOUSE Transportin-3 OS=Mus musculus GN=Tnpo3 PE=1 SV=1
Length = 923
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 169/728 (23%), Positives = 309/728 (42%), Gaps = 82/728 (11%)
Query: 9 VAQAVHVLNHDTESCNRVAANQWLVQFQQTDAAWEIATSILTSDRQSFLTDFEVEFFAAQ 68
V QAV L HD + + A+ WL + Q++ AWEI+ +L RQ D E +FAAQ
Sbjct: 11 VYQAVQALYHDPDPSGKERASFWLGELQRSVHAWEISDQLLQI-RQ----DVESCYFAAQ 65
Query: 69 ILKRKIQNEGYYLQSAAKDALLNALLVAAKRFSSGPPQLLTQICLALSALILRAVEHGKP 128
+K KIQ Y L + + +L ++LL + P ++TQ+ LA++ L L+
Sbjct: 66 TMKMKIQTSFYELPTDSHASLRDSLLTHIQNLKDLSPVIVTQLALAIADLALQMPSWKGC 125
Query: 129 IEKLFYSLQNLQSQDNGNMA-VLEMLTVLPEEVIDSQASDCNISSAHRSQYGQELLSHTP 187
++ L N D ++ +LE+LTVLPEEV + I + R++ ++L ++
Sbjct: 126 VQTLVEKYSN----DVTSLPFLLEILTVLPEEV---HSRSLRIGANRRTEIIEDLAFYSS 178
Query: 188 MVVEFLMQQSDKRFDGGVPVQLHDRNRKILRCLLSWVRAGCFTEISQGSLAAHPLLNFVF 247
VV LM +K G ++ K+ RCL SW G + +A + LL +F
Sbjct: 179 TVVSLLMTCVEK---AGTDEKM---LMKVFRCLGSWFNLGV---LDSNFMANNKLLALLF 229
Query: 248 NSLQV--------QSSFDVAIEVLVELVGRHEGLPQAL-LCRVPFLKELLLLPALTDGDE 298
LQ +++ D L + LP A+ L + E A+ D
Sbjct: 230 EVLQQDKTSSNLHEAASDCVCSALYAIENVETNLPLAMQLFQGVLTLETAYHMAVAREDL 289
Query: 299 KVIGGLACLMSEIGQAAPSLIVEASPEALA---LADALLSCVAFPSEDWEIADSTLQFWS 355
+ + +E+ + IV + L + LL C P +E+ + + FW
Sbjct: 290 DKVLNYCRIFTELCETFLEKIVCTPGQGLGDLRTLELLLICAGHPQ--YEVVEISFNFWY 347
Query: 356 TLASYILGLDASIAKNKKHVEDMFFSVFSALLDALLLRAQVDESSFNDDGMVDLPDGLVQ 415
L ++ N + + +F + LL AL Q++ + +G+ + D +
Sbjct: 348 RLGEHL------YKTNDEVIHSIFKAYIQRLLHALARHCQLEP---DHEGVPEETDDFGE 398
Query: 416 FRMNLVELLVDICQLLRSATFIQKVFFGSWGSANVPIPWKEVETKLFALNVVSEVVLQEG 475
FRM + +L+ D+ L+ S ++ + + N PW+ E LF + +++ V E
Sbjct: 399 FRMRVSDLVKDLIFLIGSMECFAQL-YSTLKEGNP--PWEVTEAVLFIMAAIAKSVDPEN 455
Query: 476 QAFDFSVIMQLVAVLSASRSEELKGFMHIVYRSLA-DVIGSYSKWISAFQTNARPLLLFL 534
V+ +V L +H R + +++G S+ + P+L +L
Sbjct: 456 NPTLVEVLEGVV---------HLPETVHTAVRYTSIELVGEMSEVVDRNPQFLDPVLGYL 506
Query: 535 AAGISEAVSSNACASALRKICEDASALIDEPSNLEILMWIGEALEKRHLPLEDEEEVVGA 594
G+ E ++A A A+ IC + + N L+ I +L+ L E ++
Sbjct: 507 MKGLCEKPLASAAAKAIHNICSVCRDHMAQHFN--GLLEIAHSLDSFMLSPEAAVGLLKG 564
Query: 595 ISLILGSVSNKELKNNLLARLLSSSYEAIGKLIDGDNNHSLIHNPATYTQILSSATRGLY 654
+L+L + ++ L+ L S A+ KL+ + ++ + +P + L
Sbjct: 565 TALVLARLPLDKI-TECLSELCSVQVMALKKLLSQEPSNGISSDPTVF----------LD 613
Query: 655 RMGTVFSHLPVPLPTNPAGDD----PIFALLRVFWPMLEKLFRSEHMENGNLSTAACRAL 710
R+ +F H TNP ++ P +++ WP+L + ++H + + CR L
Sbjct: 614 RLAVIFRH------TNPIVENGQTHPCQKVIQEIWPVLSETL-NKHRADNRIVERCCRCL 666
Query: 711 SLAIQSSG 718
A++ G
Sbjct: 667 RFAVRCVG 674
>sp|Q9Y5L0|TNPO3_HUMAN Transportin-3 OS=Homo sapiens GN=TNPO3 PE=1 SV=3
Length = 923
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 169/728 (23%), Positives = 309/728 (42%), Gaps = 82/728 (11%)
Query: 9 VAQAVHVLNHDTESCNRVAANQWLVQFQQTDAAWEIATSILTSDRQSFLTDFEVEFFAAQ 68
V QAV L HD + + A+ WL + Q++ AWEI+ +L RQ D E +FAAQ
Sbjct: 11 VYQAVQALYHDPDPSGKERASFWLGELQRSVHAWEISDQLLQI-RQ----DVESCYFAAQ 65
Query: 69 ILKRKIQNEGYYLQSAAKDALLNALLVAAKRFSSGPPQLLTQICLALSALILRAVEHGKP 128
+K KIQ Y L + + +L ++LL + P ++TQ+ LA++ L L+
Sbjct: 66 TMKMKIQTSFYELPTDSHASLRDSLLTHIQNLKDLSPVIVTQLALAIADLALQMPSWKGC 125
Query: 129 IEKLFYSLQNLQSQDNGNMA-VLEMLTVLPEEVIDSQASDCNISSAHRSQYGQELLSHTP 187
++ L N D ++ +LE+LTVLPEEV + I + R++ ++L ++
Sbjct: 126 VQTLVEKYSN----DVTSLPFLLEILTVLPEEV---HSRSLRIGANRRTEIIEDLAFYSS 178
Query: 188 MVVEFLMQQSDKRFDGGVPVQLHDRNRKILRCLLSWVRAGCFTEISQGSLAAHPLLNFVF 247
VV LM +K G ++ K+ RCL SW G + +A + LL +F
Sbjct: 179 TVVSLLMTCVEK---AGTDEKML---MKVFRCLGSWFNLGV---LDSNFMANNKLLALLF 229
Query: 248 NSLQV--------QSSFDVAIEVLVELVGRHEGLPQAL-LCRVPFLKELLLLPALTDGDE 298
LQ +++ D L + LP A+ L + E A+ D
Sbjct: 230 EVLQQDKTSSNLHEAASDCVCSALYAIENVETNLPLAMQLFQGVLTLETAYHMAVAREDL 289
Query: 299 KVIGGLACLMSEIGQAAPSLIVEASPEALA---LADALLSCVAFPSEDWEIADSTLQFWS 355
+ + +E+ + IV + L + LL C P +E+ + + FW
Sbjct: 290 DKVLNYCRIFTELCETFLEKIVCTPGQGLGDLRTLELLLICAGHPQ--YEVVEISFNFWY 347
Query: 356 TLASYILGLDASIAKNKKHVEDMFFSVFSALLDALLLRAQVDESSFNDDGMVDLPDGLVQ 415
L ++ N + + +F + LL AL Q++ + +G+ + D +
Sbjct: 348 RLGEHL------YKTNDEVIHGIFKAYIQRLLHALARHCQLEP---DHEGVPEETDDFGE 398
Query: 416 FRMNLVELLVDICQLLRSATFIQKVFFGSWGSANVPIPWKEVETKLFALNVVSEVVLQEG 475
FRM + +L+ D+ L+ S ++ + + N PW+ E LF + +++ V E
Sbjct: 399 FRMRVSDLVKDLIFLIGSMECFAQL-YSTLKEGNP--PWEVTEAVLFIMAAIAKSVDPEN 455
Query: 476 QAFDFSVIMQLVAVLSASRSEELKGFMHIVYRSLA-DVIGSYSKWISAFQTNARPLLLFL 534
V+ +V L +H R + +++G S+ + P+L +L
Sbjct: 456 NPTLVEVLEGVV---------RLPETVHTAVRYTSIELVGEMSEVVDRNPQFLDPVLGYL 506
Query: 535 AAGISEAVSSNACASALRKICEDASALIDEPSNLEILMWIGEALEKRHLPLEDEEEVVGA 594
G+ E ++A A A+ IC + + N L+ I +L+ L E ++
Sbjct: 507 MKGLCEKPLASAAAKAIHNICSVCRDHMAQHFN--GLLEIARSLDSFLLSPEAAVGLLKG 564
Query: 595 ISLILGSVSNKELKNNLLARLLSSSYEAIGKLIDGDNNHSLIHNPATYTQILSSATRGLY 654
+L+L + ++ L+ L S A+ KL+ + ++ + +P + L
Sbjct: 565 TALVLARLPLDKI-TECLSELCSVQVMALKKLLSQEPSNGISSDPTVF----------LD 613
Query: 655 RMGTVFSHLPVPLPTNPAGDD----PIFALLRVFWPMLEKLFRSEHMENGNLSTAACRAL 710
R+ +F H TNP ++ P +++ WP+L + ++H + + CR L
Sbjct: 614 RLAVIFRH------TNPIVENGQTHPCQKVIQEIWPVLSETL-NKHRADNRIVERCCRCL 666
Query: 711 SLAIQSSG 718
A++ G
Sbjct: 667 RFAVRCVG 674
>sp|Q9USZ2|YNR7_SCHPO Uncharacterized protein C11G11.07 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC11G11.07 PE=4 SV=2
Length = 955
Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 183/709 (25%), Positives = 296/709 (41%), Gaps = 86/709 (12%)
Query: 12 AVHVLNHDTESCNRVAANQWLVQFQQTDAAWEIATSILTSDRQSFLTDFEVEFFAAQILK 71
A+ L +T+ ++ AN +L +FQ++ AAW+I SIL D S E + FAAQ L+
Sbjct: 7 ALATLYANTDREQKLQANNYLEEFQKSPAAWQICFSILNQDDSS----IEAKLFAAQTLR 62
Query: 72 RKIQNEGYYLQSAAKDALLNALLVAAKRFSSGPPQLLTQICLALSALILRAVEHGKPIEK 131
+KI + + L N+LL P LL + + ++A+ L E I
Sbjct: 63 QKIVYDFHQLPKETHIEFRNSLLQLFLAAKDSPRPLLVSLAVCMAAIALHMTEWHNVIAD 122
Query: 132 LFYSLQNLQSQDNGNMAVLEMLTVLPEEVIDSQASDCNISSAHRSQYGQELL-SHTPMVV 190
+F Q S+D VL+ L+VLPEE D + + ++S ELL + P V+
Sbjct: 123 VF---QACSSKDPSGRCVLQFLSVLPEEASDPRKT--SLSWEELCIRVDELLRDNGPAVL 177
Query: 191 EFLMQQSDKRFDGGVPVQLHDRNRKILRCLLSWVRAGCFTEISQGSLAAHPLLNFVFNSL 250
E L+Q D G P D +L L+SW+R EI + A PL+ F SL
Sbjct: 178 ELLVQYVDAVRASGSPSS-ADLGL-VLTSLISWLR-----EIPLDKVMASPLIELAFRSL 230
Query: 251 QVQSSFDVAIEVLVELVGRHEGLPQ---ALLCRVPFLKELLLLPALTDG--DEKVIGGLA 305
+ A+E L L + + + A+L P L E L P L D + L
Sbjct: 231 DDDLLLEDAVEFLCALFNETKDVDETTDAILMLYPRLLE--LQPKLIAACDDPETFRALG 288
Query: 306 CLMSEIGQAAPSLIVEASPEALALADALLSCVAFPSEDWEIADSTLQFWSTLASYILGLD 365
L +E G+A LI + L L + + A +E E T FW L ++ LD
Sbjct: 289 RLFAEAGEAWVVLIARMPNDFLPLVNCIAQVAANDTE-LEAIKFTFAFWWDLKQ-MVELD 346
Query: 366 ASIAKNKKHVEDMFFSVFSALL--------DALLLRAQV--DESSFNDDGMVDLPDGLVQ 415
A+ ++ ++ + ++ + L + Q+ +E F D D D
Sbjct: 347 V-YAEARQLFAPIYLELVRIIVRHLHYPRTEDLAINEQMASNEVLFEDR---DAEDRFRS 402
Query: 416 FRMNLVELLVDICQ-------LLRSATFIQKVFFGSWGSANVPIPWKEVETKLFALNVVS 468
FR + ++L D C L++ ++ + KV + +P W++VE LFAL +
Sbjct: 403 FRHEMGDVLKDCCVVAGVSSCLVQISSQLIKVL--KIKESGLPYYWQDVEAPLFALRAIG 460
Query: 469 EVVLQEGQAFDFSVIMQLVAVLSASRSEELKGFMHIVYRSLADVIGSYSKWISAFQTNAR 528
+V A + VI L +L + ++ +G Y++W +
Sbjct: 461 RMV----PANEDQVIGSLFQILPQLPENNKVRYAATLF------LGRYTEWTAQHSEFLE 510
Query: 529 PLLLFLAAG--ISEAVSSNACASALRKICEDA-SALIDEPSNLEILMWIGEALEKRHLPL 585
L +++AG ++ +A A AL+ C D L+ S L + K +L
Sbjct: 511 LQLNYISAGFEVANKEVQSAAAQALKHFCYDCREQLVGHLSQLHMFYLNA----KTYLAP 566
Query: 586 EDEEEVVGAISLI--LGSVSN-KELKNNLLARLLSSSYEAIGKLIDGDNNHSLIHNPATY 642
+ EV ++ I + V+N + ++ LA L S A KL NP
Sbjct: 567 DPLMEVAQGLAHIVDIQPVANVYQSVHSFLAPSLQSILLAQVKL-----------NP--- 612
Query: 643 TQILSSATRGLYRMGTVFSHLPVPLPTNPAGD-DPIFALLRVFWPMLEK 690
TQ A + T+F L + P +PAG+ PI L + WP+L +
Sbjct: 613 TQAELEALADNIDIVTIF--LSLVHPPSPAGELHPIVRLFQDIWPILSR 659
>sp|A7YWD2|IPO13_BOVIN Importin-13 OS=Bos taurus GN=IPO13 PE=2 SV=1
Length = 963
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 155/698 (22%), Positives = 291/698 (41%), Gaps = 82/698 (11%)
Query: 9 VAQAVHVLNHDTESCNRVAANQWLVQFQQTDAAWEIATSILTSDRQSFLTDFEVEFFAAQ 68
V +A+H L +D N+ A +WL+Q Q + AW + +L D+ E+++F A
Sbjct: 26 VEKALHQLYYDPNIENKNLAQKWLMQAQASPQAWHFSWQLLQPDKVP-----EIQYFGAS 80
Query: 69 ILKRKIQNEGYYLQSAAKDALLNALLVAAKRFSSGPPQLLTQICLALSALILRAVEHGKP 128
L KI + + ++L L RF+SG +LT++C+AL++L L + P
Sbjct: 81 ALHIKISRYWSDIPTDQYESLKAQLFTQITRFASGSKIVLTRLCVALASLALSMMPDAWP 140
Query: 129 -----IEKLFYSLQNLQSQDNGNMAVLEMLTVLPEEVIDSQASDCNISSAHRSQYGQELL 183
+ +LF + + +A+LE+LTVLPEE S+ S R+ E
Sbjct: 141 CAVADMVRLFQAEDSPVDSQGRCLALLELLTVLPEEFQTSRLPQYR-KSLVRTSLAVECG 199
Query: 184 SHTPMVVEFLMQQSDKRFDGGVPVQLHDRNRKILRCLLSWVRAGCFTEISQGSLAAHPLL 243
+ P++ + L Q S +K+L+C SWV+ E+ A L+
Sbjct: 200 AVFPLLEQLLQQPSSPSC----------VRQKVLKCFSSWVQ----LEVPLQDCEA--LI 243
Query: 244 NFVFNSLQVQSSFDVAIEVLVELVGRHEG--LPQALLCRVPFLKEL--LLLPALTDGDEK 299
F +LQ FD ++E +V + + + LL +P + L L A+ +GD +
Sbjct: 244 QAAFAALQDSELFDSSVEAIVNAISQPDAQRYVNTLLKLIPLVLGLQDQLRQAVQNGDME 303
Query: 300 VIGGLACLMSEIGQAAPSLI---VEASPEALALADALLSCVAFPSE---DWEIADSTLQF 353
G+ + +G+ + VE LAL + ++ C P + + TL F
Sbjct: 304 TSHGICRIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHFPVNETTSSLTLTF 363
Query: 354 WSTLASYILGLDASIAKNKKHVEDMFFSVFSALLDALLLRAQVDESSFNDDGMVDLPDGL 413
W TL IL + A+ + + ++ V+ L+D LL +AQ D +
Sbjct: 364 WYTLQDDILSFE---AEKQAVYQQVYRPVYFQLVDVLLHKAQFPSDEEYGFWSSDEKEQF 420
Query: 414 VQFRMNLVELLVDICQLLRSATFIQKVF--FGS-WGSANVPIPWKEVETKLFALNVVSEV 470
+R+++ + L+ + ++L A + ++ G S+ P W+ E L+ ++E
Sbjct: 421 RIYRVDISDTLMYVYEML-GAELLSNLYDKLGRLLTSSEEPYSWQHTEALLYGFQSIAET 479
Query: 471 VLQEGQAFDFSVIMQLVAVLSASRSEELKGFMHIVYR------SLAD----VIGSYSKWI 520
+ + S+ + G + ++ R LAD IG+ S+W+
Sbjct: 480 I-------------------DVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSEWL 520
Query: 521 SAFQTNARPLLLFLAAGISEAVSSNACASALRKICEDASALIDEPSNLEILMWIGEALEK 580
+ +L + + S + S L+KIC + + P I+ + L K
Sbjct: 521 ADHPVMINSVLPLVLHALGNPELSISSVSTLKKICRECKYDL-PPYAANIVAVSQDVLMK 579
Query: 581 RHLPLEDEEEVVGAISLILGSVSNKELKNNLLARLLSSSYEAIGKLID----GDNNHSLI 636
+ ++ A+ +L ++ +E+ NL + L+S + + KL + N +++
Sbjct: 580 QIHKTSQCMWLMQALGFLLSALQVEEILKNLHS-LISPYIQQLEKLAEEIPNPSNKLAIV 638
Query: 637 HNPATYTQILSSATRGLY---RMGTVFSHLPVPLPTNP 671
H + + ++ + G+ LPVP NP
Sbjct: 639 HILGLLSNLFTTLDVSHHEDDHEGSELRKLPVPQGPNP 676
>sp|Q8K0C1|IPO13_MOUSE Importin-13 OS=Mus musculus GN=Ipo13 PE=2 SV=1
Length = 963
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 154/698 (22%), Positives = 289/698 (41%), Gaps = 82/698 (11%)
Query: 9 VAQAVHVLNHDTESCNRVAANQWLVQFQQTDAAWEIATSILTSDRQSFLTDFEVEFFAAQ 68
V +A+H L +D N+ A +WL+Q Q + AW + +L D+ E+++F A
Sbjct: 26 VEKALHQLYYDPNIDNKNLAQKWLMQAQVSPQAWHFSWQLLQPDKVP-----EIQYFGAS 80
Query: 69 ILKRKIQNEGYYLQSAAKDALLNALLVAAKRFSSGPPQLLTQICLALSALILRAVEHGKP 128
L KI + + ++L L RF+SG +LT++C+AL++L L + P
Sbjct: 81 ALHIKISRYWSDIPTDQYESLKAQLFTQITRFASGSKIVLTRLCVALASLALSMMPDAWP 140
Query: 129 -----IEKLFYSLQNLQSQDNGNMAVLEMLTVLPEEVIDSQASDCNISSAHRSQYGQELL 183
+ +LF + + +A+LE+LTVLPEE S+ R+ E
Sbjct: 141 CAVADMVRLFQAEDSPVDSQGRCLALLELLTVLPEEFQTSRLPQYR-KGLVRTSLAVECG 199
Query: 184 SHTPMVVEFLMQQSDKRFDGGVPVQLHDRNRKILRCLLSWVRAGCFTEISQGSLAAHPLL 243
+ P++ + L Q S +K+L+C SWV+ E+ A L+
Sbjct: 200 TVFPLLEQLLQQPSSPSC----------VRQKVLKCFSSWVQ----LEVPLQDCEA--LI 243
Query: 244 NFVFNSLQVQSSFDVAIEVLVELVGRHEG--LPQALLCRVPFLKEL--LLLPALTDGDEK 299
F +LQ FD ++E +V + + + LL +P + L L A+ +GD +
Sbjct: 244 QAAFAALQDSELFDSSVEAIVNAISQPDAQRYVNTLLKLIPLVLGLQEQLRQAVQNGDME 303
Query: 300 VIGGLACLMSEIGQAAPSLI---VEASPEALALADALLSCVAFPSE---DWEIADSTLQF 353
G+ + +G+ + VE LAL + ++ C P + + TL F
Sbjct: 304 TSHGICRIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPVNETTSSLTLTF 363
Query: 354 WSTLASYILGLDASIAKNKKHVEDMFFSVFSALLDALLLRAQVDESSFNDDGMVDLPDGL 413
W TL IL + A+ + + ++ V+ L+D LL +AQ D +
Sbjct: 364 WYTLQDDILSFE---AEKQAVYQQVYRPVYFQLVDVLLHKAQFPSDEEYGFWSSDEKEQF 420
Query: 414 VQFRMNLVELLVDICQLLRSATFIQKVF--FGS-WGSANVPIPWKEVETKLFALNVVSEV 470
+R+++ + L+ + ++L A + ++ G S+ P W+ E L+ ++E
Sbjct: 421 RIYRVDISDTLMYVYEML-GAELLSNLYDKLGRLLTSSEEPYSWQHTEALLYGFQSIAET 479
Query: 471 VLQEGQAFDFSVIMQLVAVLSASRSEELKGFMHIVYR------SLAD----VIGSYSKWI 520
+ + S+ + G + ++ R LAD IG+ S+W+
Sbjct: 480 I-------------------DVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSEWL 520
Query: 521 SAFQTNARPLLLFLAAGISEAVSSNACASALRKICEDASALIDEPSNLEILMWIGEALEK 580
+ +L + + S + S L+KIC + + P I+ + L K
Sbjct: 521 ADHPVMINSVLPLVLHALGNPELSVSSVSTLKKICRECKYDL-PPYAANIVAVSQDVLMK 579
Query: 581 RHLPLEDEEEVVGAISLILGSVSNKELKNNLLARLLSSSYEAIGKLID----GDNNHSLI 636
+ ++ A+ +L ++ +E+ NL + L+S + + KL + N +++
Sbjct: 580 QIHKTSQCMWLMQALGFLLSALQVEEILKNLHS-LISPYIQQLEKLAEEIPNPSNKLAIV 638
Query: 637 HNPATYTQILSSATRGLY---RMGTVFSHLPVPLPTNP 671
H + + ++ + G LPVP NP
Sbjct: 639 HILGLLSNLFTTLDVSHHEDDHEGPELRKLPVPQGPNP 676
>sp|Q5R974|IPO13_PONAB Importin-13 OS=Pongo abelii GN=IPO13 PE=2 SV=1
Length = 963
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 154/702 (21%), Positives = 288/702 (41%), Gaps = 90/702 (12%)
Query: 9 VAQAVHVLNHDTESCNRVAANQWLVQFQQTDAAWEIATSILTSDRQSFLTDFEVEFFAAQ 68
V +A+H L +D N+ A +WL+Q Q + AW + +L D+ E+++F A
Sbjct: 26 VEKALHQLYYDPNIENKNLAQKWLMQAQVSPQAWHFSWQLLQPDKVP-----EIQYFGAS 80
Query: 69 ILKRKIQNEGYYLQSAAKDALLNALLVAAKRFSSGPPQLLTQICLALSALILRAVEHGKP 128
L K + + ++L L RF+SG +LT++C+AL++L L + P
Sbjct: 81 ALPIKTSRYWSDIPTDQYESLKAQLFTQITRFASGSKIVLTRLCVALASLALSMMPDAWP 140
Query: 129 -----IEKLFYSLQNLQSQDNGNMAVLEMLTVLPEEVIDSQASDCNISSAHRSQYGQELL 183
+ +LF + + +A+LE+LTVLPEE S+ R+ E
Sbjct: 141 CAVADMVRLFQAEDSPVDGQGRCLALLELLTVLPEEFQTSRLPQYR-KGLVRTSLAVECG 199
Query: 184 SHTPMVVEFLMQQSDKRFDGGVPVQLHDRNRKILRCLLSWVRAGCFTEISQGSLAAHPLL 243
+ P++ + L Q S +K+L+C SWV+ E+ A L+
Sbjct: 200 AVFPLLEQLLQQPSSPSC----------VRQKVLKCFSSWVQ----LEVPLQDCEA--LI 243
Query: 244 NFVFNSLQVQSSFDVAIEVLVELVGRHEGLPQALLCRVPFLKELLLL--------PALTD 295
F +LQ FD ++E +V + + P A C LK + L+ A+ +
Sbjct: 244 QAAFAALQDSELFDSSVEAIVNAISQ----PDAQRCVNTLLKLIPLVLGLQEQLRQAVQN 299
Query: 296 GDEKVIGGLACLMSEIGQAAPSLI---VEASPEALALADALLSCVAFPSE---DWEIADS 349
GD + G+ + +G+ + VE LAL + ++ C P + +
Sbjct: 300 GDMETSHGICRIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPVNETTSSL 359
Query: 350 TLQFWSTLASYILGLDASIAKNKKHVEDMFFSVFSALLDALLLRAQVDESSFNDDGMVDL 409
TL FW TL IL + A+ + + ++ V+ L+D LL +AQ D
Sbjct: 360 TLTFWYTLQDDILSFE---AEKQAVYQQVYRPVYFQLVDVLLHKAQFPSDEEYGFWSSDE 416
Query: 410 PDGLVQFRMNLVELLVDICQLLRSATFIQKVF--FGS-WGSANVPIPWKEVETKLFALNV 466
+ +R+++ + L+ + ++L A + ++ G S+ P W+ E L+
Sbjct: 417 KEQFRIYRVDISDTLMYVYEML-GAELLSNLYDKLGRLLTSSEEPYSWQHTEALLYGFQS 475
Query: 467 VSEVVLQEGQAFDFSVIMQLVAVLSASRSEELKGFMHIVYR------SLAD----VIGSY 516
++E + + S+ + G + ++ R LAD IG+
Sbjct: 476 IAETI-------------------DVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGAL 516
Query: 517 SKWISAFQTNARPLLLFLAAGISEAVSSNACASALRKICEDASALIDEPSNLEILMWIGE 576
S+W++ +L + + S + S L+KIC + + P I+ +
Sbjct: 517 SEWLADHPVMINSVLPLVLHALGNPEPSVSSVSTLKKICRECKYDL-PPYAANIVAVSQD 575
Query: 577 ALEKRHLPLEDEEEVVGAISLILGSVSNKELKNNLLARLLSSSYEAIGKLID----GDNN 632
L K+ ++ A+ +L ++ +E+ NL + L+S + + KL + N
Sbjct: 576 VLMKQIHKTSQCMWLMQALGFLLSALQVEEILKNLHS-LISPYIQQLEKLAEEIPNPSNK 634
Query: 633 HSLIHNPATYTQILSSATRGLY---RMGTVFSHLPVPLPTNP 671
+++H + + ++ + G LPVP NP
Sbjct: 635 LAIVHILGLLSNLFTTLDISHHEDDHEGPELRKLPVPQGPNP 676
>sp|O94829|IPO13_HUMAN Importin-13 OS=Homo sapiens GN=IPO13 PE=1 SV=3
Length = 963
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 154/698 (22%), Positives = 289/698 (41%), Gaps = 82/698 (11%)
Query: 9 VAQAVHVLNHDTESCNRVAANQWLVQFQQTDAAWEIATSILTSDRQSFLTDFEVEFFAAQ 68
V +A+H L +D N+ A +WL+Q Q + AW + +L D+ E+++F A
Sbjct: 26 VEKALHQLYYDPNIENKNLAQKWLMQAQVSPQAWHFSWQLLQPDKVP-----EIQYFGAS 80
Query: 69 ILKRKIQNEGYYLQSAAKDALLNALLVAAKRFSSGPPQLLTQICLALSALILRAVEHGKP 128
L KI + + ++L L RF+SG +LT++C+AL++L L + P
Sbjct: 81 ALHIKISRYWSDIPTDQYESLKAQLFTQITRFASGSKIVLTRLCVALASLALSMMPDAWP 140
Query: 129 -----IEKLFYSLQNLQSQDNGNMAVLEMLTVLPEEVIDSQASDCNISSAHRSQYGQELL 183
+ +LF + + +A+LE+LTVLPEE S+ R+ E
Sbjct: 141 CAVADMVRLFQAEDSPVDGQGRCLALLELLTVLPEEFQTSRLPQYR-KGLVRTSLAVECG 199
Query: 184 SHTPMVVEFLMQQSDKRFDGGVPVQLHDRNRKILRCLLSWVRAGCFTEISQGSLAAHPLL 243
+ P++ + L Q S +K+L+C SWV+ E+ A L+
Sbjct: 200 AVFPLLEQLLQQPSSPSC----------VRQKVLKCFSSWVQ----LEVPLQDCEA--LI 243
Query: 244 NFVFNSLQVQSSFDVAIEVLVELVGRHEG--LPQALLCRVPFLKEL--LLLPALTDGDEK 299
F +LQ FD ++E +V + + + LL +P + L L A+ +GD +
Sbjct: 244 QAAFAALQDSELFDSSVEAIVNAISQPDAQRYVNTLLKLIPLVLGLQEQLRQAVQNGDME 303
Query: 300 VIGGLACLMSEIGQAAPSLI---VEASPEALALADALLSCVAFPSE---DWEIADSTLQF 353
G+ + +G+ + VE LAL + ++ C P + + TL F
Sbjct: 304 TSHGICRIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPVNETTSSLTLTF 363
Query: 354 WSTLASYILGLDASIAKNKKHVEDMFFSVFSALLDALLLRAQVDESSFNDDGMVDLPDGL 413
W TL IL + A+ + + ++ V+ L+D LL +AQ D +
Sbjct: 364 WYTLQDDILSFE---AEKQAVYQQVYRPVYFQLVDVLLHKAQFPSDEEYGFWSSDEKEQF 420
Query: 414 VQFRMNLVELLVDICQLLRSATFIQKVF--FGS-WGSANVPIPWKEVETKLFALNVVSEV 470
+R+++ + L+ + ++L A + ++ G S+ P W+ E L+ ++E
Sbjct: 421 RIYRVDISDTLMYVYEML-GAELLSNLYDKLGRLLTSSEEPYSWQHTEALLYGFQSIAET 479
Query: 471 VLQEGQAFDFSVIMQLVAVLSASRSEELKGFMHIVYR------SLAD----VIGSYSKWI 520
+ + S+ + G + ++ R LAD IG+ S+W+
Sbjct: 480 I-------------------DVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSEWL 520
Query: 521 SAFQTNARPLLLFLAAGISEAVSSNACASALRKICEDASALIDEPSNLEILMWIGEALEK 580
+ +L + + S + S L+KIC + + P I+ + L K
Sbjct: 521 ADHPVMINSVLPLVLHALGNPELSVSSVSTLKKICRECKYDL-PPYAANIVAVSQDVLMK 579
Query: 581 RHLPLEDEEEVVGAISLILGSVSNKELKNNLLARLLSSSYEAIGKLID----GDNNHSLI 636
+ ++ A+ +L ++ +E+ NL + L+S + + KL + N +++
Sbjct: 580 QIHKTSQCMWLMQALGFLLSALQVEEILKNLHS-LISPYIQQLEKLAEEIPNPSNKLAIV 638
Query: 637 HNPATYTQILSSATRGLY---RMGTVFSHLPVPLPTNP 671
H + + ++ + G LPVP NP
Sbjct: 639 HILGLLSNLFTTLDISHHEDDHEGPELRKLPVPQGPNP 676
>sp|Q9JM04|IPO13_RAT Importin-13 OS=Rattus norvegicus GN=Ipo13 PE=2 SV=1
Length = 963
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 155/699 (22%), Positives = 289/699 (41%), Gaps = 84/699 (12%)
Query: 9 VAQAVHVLNHDTESCNRVAANQWLVQFQQTDAAWEIATSILTSDRQSFLTDFEVEFFAAQ 68
V +A+H L +D N+ A +WL+Q Q + AW + +L D+ E+++F A
Sbjct: 26 VEKALHQLYYDPNIENKNLAQKWLMQAQVSPQAWHFSWQLLQPDKVP-----EIQYFGAS 80
Query: 69 ILKRKIQNEGYYLQSAAKDALLNALLVAAKRFSSGPPQLLTQICLALSALILRAVEHGKP 128
L KI + + ++L RF+SG +LT++C+AL++L L + P
Sbjct: 81 ALHIKISRYWSDIPTDQYESLKAHSFTQITRFASGSKIVLTRLCVALASLALSMMPDAWP 140
Query: 129 -----IEKLFYSLQNLQSQDNGNMAVLEMLTVLPEEVIDSQASDCNISSAHRSQYGQELL 183
+ +LF + + +A+LE+LTVLPEE S+ R+ E
Sbjct: 141 CAVADMVRLFQAEDSPVDSQGRCLALLELLTVLPEEFQTSRLPQYR-KGLVRASLAVECG 199
Query: 184 SHTPMVVEFLMQQSDKRFDGGVPVQLHDRNRKILRCLLSWVRAGCFTEISQGSLAAHPLL 243
+ P++ + L Q S +K+L+C SWV+ E+ A L+
Sbjct: 200 AVFPLLEQLLQQPSSPSC----------VRQKVLKCFSSWVQ----LEVPLQDCEA--LI 243
Query: 244 NFVFNSLQVQSSFDVAIEVLVELVGRHEG--LPQALLCRVPFLKEL--LLLPALTDGDEK 299
F +LQ FD ++E +V + + + LL +P + L L A+ +GD +
Sbjct: 244 QAAFAALQDSELFDSSVEAIVNAISQPDAQRYVNTLLKLIPLVLGLQEQLRQAVQNGDME 303
Query: 300 VIGGLACLMSEIGQAAPSLI---VEASPEALALADALLSCVAFPSE---DWEIADSTLQF 353
G+ + +G+ + VE LAL + ++ C P + + TL F
Sbjct: 304 TSHGICRIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPVNETTSSLTLTF 363
Query: 354 WSTLASYILGLDASIAKNKKHVEDMFFSVFSALLDALLLRAQVDESSFNDDGMVDLPDGL 413
W TL IL + A+ + + ++ V+ L+D LL +AQ D +
Sbjct: 364 WYTLQDDILSFE---AEKQAVYQQVYRPVYFQLVDVLLHKAQFPSDEEYGFWSSDEKEQF 420
Query: 414 VQFRMNLVELLVDICQLLRSATFIQKVF--FGS-WGSANVPIPWKEVETKLFALNVVSEV 470
+R+++ + L+ + ++L A + ++ G S+ P W+ E L+ ++E
Sbjct: 421 RIYRVDISDTLMYVYEML-GAELLSNLYDKLGRLLTSSEEPYSWQHTEALLYGFQSIAET 479
Query: 471 VLQEGQAFDFSVIMQLVAVLSASRSEELKGFMHIVYR------SLAD----VIGSYSKWI 520
+ + S+ + G + ++ R LAD IG+ S+W+
Sbjct: 480 I-------------------DVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSEWL 520
Query: 521 SAFQTNARPLLLFLAAGISEAVSSNACASALRKICEDASALIDEPSNLEILMWIGEALEK 580
+ +L + + S + S L+KIC + + P I+ + L K
Sbjct: 521 ADHPVMINSVLPLVLHALGNPELSVSSVSTLKKICRECKYEL-PPYAANIVAVSQDVLMK 579
Query: 581 RHLPLEDEEEVVGAISLILGSVSNKE-LKNNLLARLLSSSYEAIGKLID----GDNNHSL 635
+ ++ A+ +L ++ +E LKN L L+S+ + + KL + N ++
Sbjct: 580 QIHKTSQCMWLMQALGFLLSALQVEENLKN--LHSLISTYIQQLEKLAEEIPKPSNKLAI 637
Query: 636 IHNPATYTQILSSATRGLY---RMGTVFSHLPVPLPTNP 671
+H + + ++ + G LPVP NP
Sbjct: 638 VHILGLLSNLFTTLDVSHHEDDHEGPELRKLPVPQGPNP 676
>sp|Q99189|MTR10_YEAST mRNA transport regulator MTR10 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MTR10 PE=1 SV=1
Length = 972
Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 134/599 (22%), Positives = 263/599 (43%), Gaps = 91/599 (15%)
Query: 4 DLQIK-VAQAVHVLNHDTESCNRVAANQWLVQFQQTDAAWEIATSILTSDRQSFLTDFEV 62
+LQ+ + A+ ++ ++ A Q+L QFQ++ AW I IL+ + + E+
Sbjct: 3 NLQVSDIETALQCISSTASQDDKNKALQFLEQFQRSTVAWSICNEILSKEDPTNAL-LEL 61
Query: 63 EFFAAQILKRKIQNEGYYLQS---AAKDALLNALLVAAKRFSSGPPQLLTQICLALSALI 119
FAAQ L+ K+ + L++ KD+LL LL ++ ++TQ+ +AL+ L
Sbjct: 62 NIFAAQTLRNKVTYDLSQLENNLPQFKDSLLTLLLSHNQKL------IITQLNVALARLA 115
Query: 120 LRAVEHGKPIEKLFYSLQNLQSQDNGNMAVLEMLTVLPEEVIDSQASDCNISSAHRSQYG 179
++ +E PI ++ L + S +L L +LPEE +D ++ +++ +
Sbjct: 116 IQFLEWQNPIFEIISLLNSSPS------ILLNFLRILPEETLDIAST--SLTEVEFNSRI 167
Query: 180 QELLSHTPM---VVEF------LMQQSDKRFDGGVPVQLHDRNRKILRCLLSWVRAGCFT 230
EL+ P+ V++F L+Q +D + ++ +ILRCL SW
Sbjct: 168 HELID--PIAEDVLKFLVSCIDLLQNTDGNSSSSISLE------QILRCLNSWSYEFPVE 219
Query: 231 EISQGSLAAHPLLNFVFNSLQV-----QSSFDVAIEVLVELVGR-----HEGLPQALLCR 280
++ L PL+N VF ++ +FD AI+ L ++ +E L AL +
Sbjct: 220 QL----LTVQPLINLVFETISNGNESDMEAFDSAIDCLCVILRESRDTTNEQLISALFHQ 275
Query: 281 VPFLKELLLLPALTDG------DEKVIGGLACLMSEIGQAAPSLIVEASPE---ALALAD 331
+ L+E LL TD D+ ++ G+ L E G+A S+++ +P+ + L
Sbjct: 276 LMLLQEKLLPTLFTDHPLNDEYDDDLLEGMTRLFVEAGEAW-SVVISKNPDFFKPMVLVL 334
Query: 332 ALLSCVAFPSEDWEIADSTLQFWSTLASYILGLDASIAKNKKHVEDMFFSVFSALLDALL 391
+L+C +ED ++ T FW + + + + +F L++ ++
Sbjct: 335 LMLTC---KNEDLDVVSYTFPFWFNFKQSL------VLPRYQESRKAYSDIFVKLINGII 385
Query: 392 LRAQVDESSFNDDGMVDLPDGLVQFRMNLVELLVDICQLLRSATFIQKVFFGSWGSANVP 451
Q F+ + D FR ++ ++L D ++ ++ + + +
Sbjct: 386 THLQYPSGQFSSK---EEEDKFKDFRYHMGDVLKDCTAVVGTSEALSQPLIRIKSAIENN 442
Query: 452 IPWKEVETKLFALNVVS-EVVLQEGQAFDFSVIMQLVAVLSASRSEELKGFMHIVYRSLA 510
W+ +E LF+L ++ E+ L E +++ +++ ++ + E+ K I Y S
Sbjct: 443 NSWQIMEAPLFSLRTMAKEISLTEN-----TILPEIIKII-CNLPEQAK----IRYASTL 492
Query: 511 DVIGSYSKWISAFQTNARPLLLFLAAG--ISEAVSS-----NACASALRKICEDASALI 562
V+G Y++W + L ++ G + E S A + AL C D S L+
Sbjct: 493 -VLGRYTEWTAKHPELLEVQLQYIFNGFQLHEGSSDMQSIITASSHALMFFCSDCSKLL 550
>sp|Q5ZIC8|IPO13_CHICK Importin-13 OS=Gallus gallus GN=IPO13 PE=2 SV=1
Length = 958
Score = 80.1 bits (196), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 154/658 (23%), Positives = 273/658 (41%), Gaps = 83/658 (12%)
Query: 9 VAQAVHVLNHDTESCNRVAANQWLVQFQQTDAAWEIATSILTSDRQSFLTDFEVEFFAAQ 68
V +A+H L +D N+ A +WL+Q Q + AW + +L D+ E+++ A
Sbjct: 21 VEKALHQLYYDPNIENKNLAQKWLMQAQVSPQAWHFSWLLLNMDKVP-----EIQYSAPA 75
Query: 69 ILKRKIQNEGYYLQSAAKDALLNALLVAAKRFSSGPPQLLTQICLALSALILRAVEHGKP 128
+ G ++L + L RF+ G +LT++C+AL++L L + P
Sbjct: 76 PCTSRSPATGTTSLPDQYESLKSQLFTHITRFAGGSKIVLTRLCVALASLALSMMPEAWP 135
Query: 129 --IEKLFYSLQNLQSQDNGN---MAVLEMLTVLPEEVIDSQASDCNISSAHRSQYGQELL 183
+ + Q S +G +A+LE+LTVLPEE S+ RS QE
Sbjct: 136 CAVADMVRMFQAEDSNVDGRARCLALLELLTVLPEEFQTSRLPQYRKGQV-RSVLAQECG 194
Query: 184 SHTPMVVEFLMQQSDKRFDGGVPVQLHDRNRKILRCLLSWVRAGCFTEISQGSLAAHPLL 243
S P++ + L QQ F +K+L+C SWV ++ + L+
Sbjct: 195 SVFPLLEQLLQQQDSPGF----------IKQKVLKCFSSWV------QLEIPLMDCENLI 238
Query: 244 NFVFNSLQVQSSFDVAIEVLVELVGRHEG--LPQALLCRVPFLKEL--LLLPALTDGDEK 299
F SLQ FD A+E +V + + + LL +P + L L A+ GD +
Sbjct: 239 QAAFTSLQDPELFDTAVEAVVNAISQPDAQRYVNTLLKLIPPVLGLQEQLRQAVQSGDME 298
Query: 300 VIGGLACLMSEIGQAAPSLI---VEASPEALALADALLSCVAFPSE---DWEIADSTLQF 353
G+ + +G+ + VE LAL + ++ C P + + TL F
Sbjct: 299 TSHGICRIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPVNETTSSLTLTF 358
Query: 354 WSTLASYILGLDASIAKNKKHV-EDMFFSVFSALLDALLLRAQVDESSFNDDGMVDLPDG 412
W TL IL S +K+ V + ++ V+ L+D LL +AQ D +
Sbjct: 359 WYTLQDDIL----SFEPDKQAVYQQVYRPVYFQLVDVLLHKAQFPSDEEYGFWSSDEKEQ 414
Query: 413 LVQFRMNLVELLVDICQLLRSATFIQKVF--FGS-WGSANVPIPWKEVETKLFALNVVSE 469
+R+++ + L+ + ++L A + ++ G + P W+ E L+ ++E
Sbjct: 415 FRIYRVDISDTLMYVYEML-GAELLSSLYDKLGRLLTNTEQPSTWQHTEALLYGFQSIAE 473
Query: 470 VVLQEGQAFDFSVIMQLVAVLSASRSEELKGFMHIVYR------SLAD----VIGSYSKW 519
+ + S+ + G + ++ R LAD IG+ S+W
Sbjct: 474 TI-------------------DVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSEW 514
Query: 520 IS---AFQTNARPLLLFLAAGISEAVSSNACASALRKICEDASALIDEPSNLEILMWIGE 576
++ N PL+L ++SS S L+KIC + + P I+ E
Sbjct: 515 LADHPVMINNVLPLVLQALGNPELSISS---VSTLKKICRECKYDL-PPYAANIVAVSQE 570
Query: 577 ALEKRHLPLEDEEEVVGAISLILGSVSNKELKNNLLARLLSSSYEAIGKLIDGDNNHS 634
L K+ ++ A+ +L ++ +E+ NL + L++ + + KL D N S
Sbjct: 571 VLMKQIHKTSQCMWLMQALGFLLSALQVEEILKNLHS-LITPYIQQLEKLADETPNPS 627
>sp|Q54C85|IP13A_DICDI Importin-13 homolog A OS=Dictyostelium discoideum GN=ipo13A PE=3
SV=1
Length = 1064
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 22/207 (10%)
Query: 30 QWLVQFQQTDAAWEIATSILTSDRQSFLTDFEVEFFAAQILKRKIQNEGYYL-QSAAKDA 88
QWL+QFQ++ ++W IA +L S+ + E+++F A ++ KI+N L Q K+
Sbjct: 46 QWLIQFQKSFSSWSIAPLLLMSNIK------EIQYFGASTIENKIKNNWLSLSQDMKKEF 99
Query: 89 LLNALLVAAKRFSSGPPQLLTQICLALSALILRAVEH--GKPI-EKLFYSLQNLQSQD-- 143
L N LL + + ++T++CLA+S + + PI + L S Q++ + D
Sbjct: 100 LDNLLLFLKTQITKCSTVVITRLCLAVSVIACHSTTDLWANPILDVLQLSFQDINNLDCF 159
Query: 144 NGNMA--VLEMLTVLPEEVIDSQASDCNISSAHRSQYGQELLSHTPMVVEFLMQQSDKRF 201
N N+ LE+LT+ PEE+ ++ I+ R++ G + H V E L +
Sbjct: 160 NPNLVNLTLELLTIFPEELTNADY----ITQEKRNKVGLQFNKHNSKVFEILCKIMSLPQ 215
Query: 202 DGGVPVQLHDRNRKILRCLLSWVRAGC 228
+ + + + L+C SW+ C
Sbjct: 216 NQQTLIFM----KSSLKCFKSWILFDC 238
>sp|Q54WT9|IP13B_DICDI Importin-13 homolog B OS=Dictyostelium discoideum GN=ipo13B PE=3
SV=1
Length = 1119
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 80/185 (43%), Gaps = 26/185 (14%)
Query: 9 VAQAVHVLNHDTESCNRVAANQWLVQFQQTDAAWEIATSILTSDRQSFLTDFEVEFFAAQ 68
+ A+H L +S R A +WL+ FQ+ AWE +L FE+++F A
Sbjct: 75 LTHALHTLYKSNDSNQRKLAEKWLILFQKQPIAWEFCPRLLLETNI-----FELQYFGAS 129
Query: 69 ILKRKIQNEGYYLQSAAKDALLNALLVAAKRFSSGPPQLLTQICLALSALILRAVEH--- 125
L+ K++NE K +LN ++ + + P +T++ + L+ ++
Sbjct: 130 TLESKLKNEWNECNVEMKSKILNTIVSIIQNSTKLPICCVTRVSVTLTIAVMYTFPEIWR 189
Query: 126 -----------GKPIEKLFYSLQNLQSQDNGN----MAVLEMLTVLPEEVIDSQASDCNI 170
+ I L SL + SQ++ N + VLE L++LP+E+ + C
Sbjct: 190 NAIFDIIHLSIKQDINTL--SLHD-PSQNHFNTDRLLMVLEFLSILPDELKKQDLALCKY 246
Query: 171 SSAHR 175
S +
Sbjct: 247 SEIQK 251
>sp|O13874|YE19_SCHPO Uncharacterized NOC2 family protein C1B3.09c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC1B3.09c PE=3 SV=1
Length = 528
Score = 34.3 bits (77), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 13/95 (13%)
Query: 26 VAANQWLVQFQQTDAAW--------EIATSILTSDRQSFLTDFEVEFFAAQILKRKIQNE 77
+A Q L Q DA W E ++ R L D +E+ + K + +
Sbjct: 112 IAYCQKLSGTNQADALWKNVEKDLKETLDNVDFDARSKILQDLRLEYAEILLTKFNFEKK 171
Query: 78 GYYLQSAAKDALLNALLVAAKRFSSGPPQLLTQIC 112
GY S+A D +L+ K+FS P L+TQ+C
Sbjct: 172 GYQNLSSALDTILHI-----KKFSKFPNGLVTQLC 201
>sp|Q9Z0R6|ITSN2_MOUSE Intersectin-2 OS=Mus musculus GN=Itsn2 PE=1 SV=2
Length = 1659
Score = 33.5 bits (75), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 27/145 (18%)
Query: 553 KICEDASALIDEPSNLEILMWIGEALEKRHLPLED--EEEVVGAISLILG---------- 600
++C + + E N + L WI + H+ E E+ + +++ LG
Sbjct: 1349 ELCSQVNEGVREKENSDRLEWI-----QAHVQCEGLAEQLIFNSLTNCLGPRKLLHSGKL 1403
Query: 601 --SVSNKELKNNLLARLLSSSYEAIGKLIDGDNNHSLIHNPATYTQILSSATRGLYRMGT 658
+ SNKEL L L +Y + + + H + N SSA +Y+
Sbjct: 1404 YKTKSNKELHAFLFNDFLLLTY--LVRQFAAASGHEKLFNSK------SSAQFRMYKTPI 1455
Query: 659 VFSHLPVPLPTNPAGDDPIFALLRV 683
+ + V LPT+P+GD+P+F + +
Sbjct: 1456 FLNEVLVKLPTDPSGDEPVFHISHI 1480
>sp|Q9IK90|MATRX_NIPAV Matrix protein OS=Nipah virus GN=M PE=3 SV=1
Length = 352
Score = 33.5 bits (75), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 422 ELLVDICQL----LRSATFIQKVFFGSWGSANVPIPWKEVETKLFALNVV 467
+LL ++C L R+A +K+ FGS G N +PWK+V T N V
Sbjct: 105 DLLEELCSLKVTVRRTAGSTEKIVFGSSGPLNHLVPWKKVLTSGSIFNAV 154
>sp|Q5SPJ8|XPOT_DANRE Exportin-T OS=Danio rerio GN=xpot PE=3 SV=1
Length = 961
Score = 33.1 bits (74), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 11 QAVHVLNHDTESCNRVAANQWLVQFQQTDAAWEIATSILTSDRQSFLTDFEVEFFAAQIL 70
QA+ LN + ++C R A + Q + + WE+ L + +D V+FF Q+L
Sbjct: 4 QALMGLNPNADACYRQRALAYFEQLKASLDGWEVCAEALA---KGVYSDDHVKFFCFQVL 60
Query: 71 KRKIQNEGYYLQSAAKDALLNALLV 95
+ +I+ L SAA+ L+ L+
Sbjct: 61 EHQIKFRHGSL-SAAQQQLIRETLM 84
>sp|Q86UT5|NHRF4_HUMAN Na(+)/H(+) exchange regulatory cofactor NHE-RF4 OS=Homo sapiens
GN=PDZD3 PE=1 SV=2
Length = 571
Score = 33.1 bits (74), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 15/23 (65%)
Query: 655 RMGTVFSHLPVPLPTNPAGDDPI 677
R G VFS +PVPLPTNP P
Sbjct: 45 RRGRVFSPVPVPLPTNPTTQHPT 67
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 245,715,437
Number of Sequences: 539616
Number of extensions: 9808069
Number of successful extensions: 25016
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 24957
Number of HSP's gapped (non-prelim): 27
length of query: 719
length of database: 191,569,459
effective HSP length: 125
effective length of query: 594
effective length of database: 124,117,459
effective search space: 73725770646
effective search space used: 73725770646
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)