BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005017
(719 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 281 bits (719), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 138/268 (51%), Positives = 179/268 (66%), Gaps = 5/268 (1%)
Query: 76 GRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL 135
GR++++D +G+G+FKTVYK D +EVAW ++ D + Q+ E LK L
Sbjct: 25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAW--CELQDRKLTKSERQRFKEEAEXLKGL 82
Query: 136 KDDNVVKFYKSW--VDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGL 193
+ N+V+FY SW KK + ++TEL TSG L+ Y K+ K IKV+++W RQIL GL
Sbjct: 83 QHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGL 142
Query: 194 VYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELY 253
+LH+ PPIIHRDLKCDNIF+ G G VKIGDLGLA + A++VIGTPEF APE Y
Sbjct: 143 QFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFXAPEXY 202
Query: 254 EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGF 313
EE+Y+E VD+Y+FG C LE T EYPYSEC+N AQI+++VTSG+KPAS KV P++K
Sbjct: 203 EEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEI 262
Query: 314 IEKCLVP-ASERLSAKDLLKDPFLQVEN 340
IE C+ ER S KDLL F Q E
Sbjct: 263 IEGCIRQNKDERYSIKDLLNHAFFQEET 290
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 148/300 (49%), Gaps = 29/300 (9%)
Query: 59 TAEPPDADSDFVEKDPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKID 113
+ E D +SD +E D YDE VLGKG + VY D + +A +
Sbjct: 4 STEEGDCESDLLEYD-----YEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER 58
Query: 114 DVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RK 172
D Q L+ E+ L K LK N+V++ S+ ++ + + E G+L R
Sbjct: 59 DSRYS----QPLHEEIALHKHLKHKNIVQYLGSFSENG--FIKIFMEQVPGGSLSALLRS 112
Query: 173 KHKNV--DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA 230
K + + + I + +QIL GL YLH + I+HRD+K DN+ +N G +KI D G +
Sbjct: 113 KWGPLKDNEQTIGFYTKQILEGLKYLHDNQ--IVHRDIKGDNVLINTYSGVLKISDFGTS 170
Query: 231 --IAMQQPTARSVIGTPEFMAPELYEE---EYNELVDIYSFGMCILEMVTFEYPYSECKN 285
+A P + GT ++MAPE+ ++ Y + DI+S G I+EM T + P+ E
Sbjct: 171 KRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE 230
Query: 286 P-AQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQVENQKE 343
P A +FK + P + + + K FI KC P +R A DLL D FL+V ++K+
Sbjct: 231 PQAAMFKVGMFKVHP-EIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSKKK 289
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 134/244 (54%), Gaps = 20/244 (8%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGD-LQKLYSEVHLLKSLKDDNVV 141
E +G G+F TV++A E+ G +VA VKI + + + EV ++K L+ N+V
Sbjct: 43 EKIGAGSFGTVHRA--EWHGSDVA---VKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKN-----VDIKVIKNWARQILHGLVYL 196
F + + ++++TE + G+L YR HK+ +D + + A + G+ YL
Sbjct: 98 LFMGAVT--QPPNLSIVTEYLSRGSL--YRLLHKSGAREQLDERRRLSMAYDVAKGMNYL 153
Query: 197 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAI--AMQQPTARSVIGTPEFMAPE-LY 253
H+ NPPI+HR+LK N+ V+ + VK+ D GL+ A +++S GTPE+MAPE L
Sbjct: 154 HNRNPPIVHRNLKSPNLLVDKKY-TVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLR 212
Query: 254 EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGF 313
+E NE D+YSFG+ + E+ T + P+ NPAQ+ V K + + +PQ+
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQPWGNL-NPAQVVAAVGFKCKRLEIPRNLNPQVAAI 271
Query: 314 IEKC 317
IE C
Sbjct: 272 IEGC 275
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 136/253 (53%), Gaps = 14/253 (5%)
Query: 80 RYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDN 139
R ++ +G+G F VY+A G+ VA +V+I D++ + E+ LLK L N
Sbjct: 35 RIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCI-KEIDLLKQLNHPN 93
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNL----RQYRKKHKNVDIKVIKNWARQILHGLVY 195
V+K+Y S+++D + +N++ EL +G+L + ++K+ + + + + + Q+ L +
Sbjct: 94 VIKYYASFIEDNE--LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPE-L 252
+HS ++HRD+K N+F+ G VK+GDLGL + + A S++GTP +M+PE +
Sbjct: 152 MHSRR--VMHRDIKPANVFITAT-GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERI 208
Query: 253 YEEEYNELVDIYSFGMCILEMVTFEYP-YSECKNPAQIFKKVTSGIKPASLAKVNDPQIK 311
+E YN DI+S G + EM + P Y + N + KK+ P + +++
Sbjct: 209 HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELR 268
Query: 312 GFIEKCLVPASER 324
+ C+ P E+
Sbjct: 269 QLVNMCINPDPEK 281
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 132/244 (54%), Gaps = 20/244 (8%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGD-LQKLYSEVHLLKSLKDDNVV 141
E +G G+F TV++A E+ G +VA VKI + + + EV ++K L+ N+V
Sbjct: 43 EKIGAGSFGTVHRA--EWHGSDVA---VKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKN-----VDIKVIKNWARQILHGLVYL 196
F + + ++++TE + G+L YR HK+ +D + + A + G+ YL
Sbjct: 98 LFMGAVT--QPPNLSIVTEYLSRGSL--YRLLHKSGAREQLDERRRLSMAYDVAKGMNYL 153
Query: 197 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAI--AMQQPTARSVIGTPEFMAPE-LY 253
H+ NPPI+HRDLK N+ V+ + VK+ D GL+ A ++ GTPE+MAPE L
Sbjct: 154 HNRNPPIVHRDLKSPNLLVDKKY-TVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLR 212
Query: 254 EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGF 313
+E NE D+YSFG+ + E+ T + P+ NPAQ+ V K + + +PQ+
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQPWGNL-NPAQVVAAVGFKCKRLEIPRNLNPQVAAI 271
Query: 314 IEKC 317
IE C
Sbjct: 272 IEGC 275
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 134/272 (49%), Gaps = 24/272 (8%)
Query: 81 YDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL 135
YDE VLGKG + VY D + +A + D Q L+ E+ L K L
Sbjct: 7 YDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS----QPLHEEIALHKHL 62
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNV--DIKVIKNWARQILHG 192
K N+V++ S+ ++ + + E G+L R K + + + I + +QIL G
Sbjct: 63 KHKNIVQYLGSFSENG--FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG 120
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAP 250
L YLH + I+HRD+K DN+ +N G +KI D G + +A P + GT ++MAP
Sbjct: 121 LKYLHDNQ--IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAP 178
Query: 251 ELYEE---EYNELVDIYSFGMCILEMVTFEYPYSECKNP-AQIFKKVTSGIKPASLAKVN 306
E+ ++ Y + DI+S G I+EM T + P+ E P A +FK + P + +
Sbjct: 179 EIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP-EIPESM 237
Query: 307 DPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQ 337
+ K FI KC P +R A DLL D FL+
Sbjct: 238 SAEAKAFILKCFEPDPDKRACANDLLVDEFLK 269
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 144/275 (52%), Gaps = 25/275 (9%)
Query: 73 DPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLL 132
DP +Y R++++ G+GA TVY A D G EVA ++ LQ + + +E+ ++
Sbjct: 17 DPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMN----LQQQPKKELIINEILVM 71
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHG 192
+ K+ N+V + S++ + V M E G+L + +D I R+ L
Sbjct: 72 RENKNPNIVNYLDSYLVGDELWVVM--EYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQA 128
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAP 250
L +LHS+ +IHRD+K DNI + G G VK+ D G I +Q +++GTP +MAP
Sbjct: 129 LEFLHSNQ--VIHRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 185
Query: 251 ELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQ 309
E+ + Y VDI+S G+ +EM+ E PY +NP + + + P ++ +P+
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTP----ELQNPE 240
Query: 310 -----IKGFIEKCL-VPASERLSAKDLLKDPFLQV 338
+ F+ +CL + +R SAK+LL+ FL++
Sbjct: 241 KLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI 275
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 143/275 (52%), Gaps = 25/275 (9%)
Query: 73 DPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLL 132
DP +Y R++++ G+GA TVY A D G EVA ++ LQ + + +E+ ++
Sbjct: 17 DPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMN----LQQQPKKELIINEILVM 71
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHG 192
+ K+ N+V + S++ + V M E G+L + +D I R+ L
Sbjct: 72 RENKNPNIVNYLDSYLVGDELWVVM--EYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQA 128
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAP 250
L +LHS+ +IHRD+K DNI + G G VK+ D G I +Q ++GTP +MAP
Sbjct: 129 LEFLHSNQ--VIHRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAP 185
Query: 251 ELY-EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQ 309
E+ + Y VDI+S G+ +EM+ E PY +NP + + + P ++ +P+
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTP----ELQNPE 240
Query: 310 -----IKGFIEKCL-VPASERLSAKDLLKDPFLQV 338
+ F+ +CL + +R SAK+LL+ FL++
Sbjct: 241 KLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKI 275
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 143/275 (52%), Gaps = 25/275 (9%)
Query: 73 DPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLL 132
DP +Y R++++ G+GA TVY A D G EVA ++ LQ + + +E+ ++
Sbjct: 17 DPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMN----LQQQPKKELIINEILVM 71
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHG 192
+ K+ N+V + S++ + V M E G+L + +D I R+ L
Sbjct: 72 RENKNPNIVNYLDSYLVGDELWVVM--EYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQA 128
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAP 250
L +LHS+ +IHRD+K DNI + G G VK+ D G I +Q ++GTP +MAP
Sbjct: 129 LEFLHSNQ--VIHRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAP 185
Query: 251 ELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQ 309
E+ + Y VDI+S G+ +EM+ E PY +NP + + + P ++ +P+
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTP----ELQNPE 240
Query: 310 -----IKGFIEKCL-VPASERLSAKDLLKDPFLQV 338
+ F+ +CL + +R SAK+LL+ FL++
Sbjct: 241 KLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI 275
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 135/260 (51%), Gaps = 16/260 (6%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E LG+G++ +VYKA + G VA +V ++ DLQ++ E+ +++ +VVK
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVE------SDLQEIIKEISIMQQCDSPHVVK 88
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQ-YRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
+Y S+ K + ++ E +G++ R ++K + I + L GL YLH
Sbjct: 89 YYGSYF--KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK 146
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS--VIGTPEFMAPELYEE-EYN 258
IHRD+K NI +N G K+ D G+A + A+ VIGTP +MAPE+ +E YN
Sbjct: 147 --IHRDIKAGNILLN-TEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYN 203
Query: 259 ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL 318
+ DI+S G+ +EM + PY++ IF T+ ++ F+++CL
Sbjct: 204 CVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCL 263
Query: 319 VPASE-RLSAKDLLKDPFLQ 337
V + E R +A LL+ PF++
Sbjct: 264 VKSPEQRATATQLLQHPFVR 283
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 143/275 (52%), Gaps = 25/275 (9%)
Query: 73 DPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLL 132
DP +Y R++++ G+GA TVY A D G EVA ++ LQ + + +E+ ++
Sbjct: 18 DPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMN----LQQQPKKELIINEILVM 72
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHG 192
+ K+ N+V + S++ + V M E G+L + +D I R+ L
Sbjct: 73 RENKNPNIVNYLDSYLVGDELWVVM--EYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQA 129
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAP 250
L +LHS+ +IHRD+K DNI + G G VK+ D G I +Q ++GTP +MAP
Sbjct: 130 LEFLHSNQ--VIHRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAP 186
Query: 251 ELY-EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQ 309
E+ + Y VDI+S G+ +EM+ E PY +NP + + + P ++ +P+
Sbjct: 187 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTP----ELQNPE 241
Query: 310 -----IKGFIEKCL-VPASERLSAKDLLKDPFLQV 338
+ F+ +CL + +R SAK+L++ FL++
Sbjct: 242 KLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLKI 276
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 150/291 (51%), Gaps = 33/291 (11%)
Query: 65 ADSDFVEK--------DPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVL 116
+D + +EK DP +Y R++++ G+GA TVY A D G EVA ++ L
Sbjct: 2 SDEEILEKLRIIVSVGDPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMN----L 56
Query: 117 QLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKN 176
Q + + +E+ +++ K+ N+V + S++ + V M E G+L +
Sbjct: 57 QQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM--EYLAGGSLTDVVTE-TC 113
Query: 177 VDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQ 234
+D I R+ L L +LHS+ +IHR++K DNI + G G VK+ D G I +
Sbjct: 114 MDEGQIAAVCRECLQALEFLHSNQ--VIHRNIKSDNILL-GMDGSVKLTDFGFCAQITPE 170
Query: 235 QPTARSVIGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 293
Q +++GTP +MAPE+ + Y VDI+S G+ +EM+ E PY +NP + +
Sbjct: 171 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLI 229
Query: 294 TSGIKPASLAKVNDPQ-----IKGFIEKCL-VPASERLSAKDLLKDPFLQV 338
+ P ++ +P+ + F+ +CL + +R SAK+L++ FL++
Sbjct: 230 ATNGTP----ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLKI 276
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 139/272 (51%), Gaps = 16/272 (5%)
Query: 69 FVEKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSE 128
F DP + + +++ GKG+F V+K D VA +KI D+ + +++ + E
Sbjct: 20 FQSMDPEELFTKLEKI-GKGSFGEVFKGIDNRTQKVVA---IKIIDLEEAEDEIEDIQQE 75
Query: 129 VHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQ 188
+ +L V K+Y S++ D K + +I E G+ + +D I R+
Sbjct: 76 ITVLSQCDSPYVTKYYGSYLKDTK--LWIIMEYLGGGSALDLLEPGP-LDETQIATILRE 132
Query: 189 ILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPE 246
IL GL YLHS IHRD+K N+ ++ HGEVK+ D G+A + Q + +GTP
Sbjct: 133 ILKGLDYLHSEKK--IHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNTFVGTPF 189
Query: 247 FMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKV 305
+MAPE+ ++ Y+ DI+S G+ +E+ E P+SE +P ++ + P
Sbjct: 190 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL-HPMKVLFLIPKNNPPTLEGNY 248
Query: 306 NDPQIKGFIEKCL-VPASERLSAKDLLKDPFL 336
+ P +K F+E CL S R +AK+LLK F+
Sbjct: 249 SKP-LKEFVEACLNKEPSFRPTAKELLKHKFI 279
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 138/268 (51%), Gaps = 16/268 (5%)
Query: 73 DPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLL 132
DP + + +++ GKG+F V+K D VA +KI D+ + +++ + E+ +L
Sbjct: 4 DPEELFTKLEKI-GKGSFGEVFKGIDNRTQKVVA---IKIIDLEEAEDEIEDIQQEITVL 59
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHG 192
V K+Y S++ D K + +I E G+ + +D I R+IL G
Sbjct: 60 SQCDSPYVTKYYGSYLKDTK--LWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKG 116
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAP 250
L YLHS IHRD+K N+ ++ HGEVK+ D G+A + Q + +GTP +MAP
Sbjct: 117 LDYLHSEKK--IHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 173
Query: 251 ELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQ 309
E+ ++ Y+ DI+S G+ +E+ E P+SE +P ++ + P + P
Sbjct: 174 EVIKQSAYDSKADIWSLGITAIELARGEPPHSEL-HPMKVLFLIPKNNPPTLEGNYSKP- 231
Query: 310 IKGFIEKCL-VPASERLSAKDLLKDPFL 336
+K F+E CL S R +AK+LLK F+
Sbjct: 232 LKEFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 139/271 (51%), Gaps = 16/271 (5%)
Query: 70 VEKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEV 129
++ DP + + +++ GKG+F V+K D VA +KI D+ + +++ + E+
Sbjct: 16 LKADPEELFTKLEKI-GKGSFGEVFKGIDNRTQKVVA---IKIIDLEEAEDEIEDIQQEI 71
Query: 130 HLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQI 189
+L V K+Y S++ D K + +I E G+ + +D I R+I
Sbjct: 72 TVLSQCDSPYVTKYYGSYLKDTK--LWIIMEYLGGGSALDLLEPGP-LDETQIATILREI 128
Query: 190 LHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEF 247
L GL YLHS IHRD+K N+ ++ HGEVK+ D G+A + Q +GTP +
Sbjct: 129 LKGLDYLHSEKK--IHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFW 185
Query: 248 MAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVN 306
MAPE+ ++ Y+ DI+S G+ +E+ E P+SE +P ++ + P +
Sbjct: 186 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL-HPMKVLFLIPKNNPPTLEGNYS 244
Query: 307 DPQIKGFIEKCL-VPASERLSAKDLLKDPFL 336
P +K F+E CL S R +AK+LLK F+
Sbjct: 245 KP-LKEFVEACLNKEPSFRPTAKELLKHKFI 274
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 137/260 (52%), Gaps = 18/260 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G+G+ V A ++ G +VA K+D Q +L L++EV +++ DNVV Y
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVK--KMDLRKQQRREL--LFNEVVIMRDYHHDNVVDMY 108
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
S++ + V M E G L H ++ + I +L L YLH N +I
Sbjct: 109 SSYLVGDELWVVM--EFLEGGALTDI-VTHTRMNEEQIATVCLSVLRALSYLH--NQGVI 163
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPELYEE-EYNELV 261
HRD+K D+I + + G +K+ D G ++ + P + ++GTP +MAPE+ Y V
Sbjct: 164 HRDIKSDSILLTSD-GRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEV 222
Query: 262 DIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKP--ASLAKVNDPQIKGFIEKCLV 319
DI+S G+ ++EM+ E PY + P Q +++ + P L KV+ ++GF++ LV
Sbjct: 223 DIWSLGIMVIEMIDGEPPYFN-EPPLQAMRRIRDSLPPRVKDLHKVSS-VLRGFLDLMLV 280
Query: 320 -PASERLSAKDLLKDPFLQV 338
S+R +A++LL PFL++
Sbjct: 281 REPSQRATAQELLGHPFLKL 300
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 137/268 (51%), Gaps = 16/268 (5%)
Query: 73 DPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLL 132
DP + + +++ GKG+F V+K D VA +KI D+ + +++ + E+ +L
Sbjct: 4 DPEELFTKLEKI-GKGSFGEVFKGIDNRTQKVVA---IKIIDLEEAEDEIEDIQQEITVL 59
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHG 192
V K+Y S++ D K + +I E G+ + +D I R+IL G
Sbjct: 60 SQCDSPYVTKYYGSYLKDTK--LWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKG 116
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAP 250
L YLHS IHRD+K N+ ++ HGEVK+ D G+A + Q +GTP +MAP
Sbjct: 117 LDYLHSEKK--IHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAP 173
Query: 251 ELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQ 309
E+ ++ Y+ DI+S G+ +E+ E P+SE +P ++ + P + P
Sbjct: 174 EVIKQSAYDSKADIWSLGITAIELARGEPPHSEL-HPMKVLFLIPKNNPPTLEGNYSKP- 231
Query: 310 IKGFIEKCL-VPASERLSAKDLLKDPFL 336
+K F+E CL S R +AK+LLK F+
Sbjct: 232 LKEFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 120/219 (54%), Gaps = 16/219 (7%)
Query: 125 LYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKN 184
L++EV +++ + +NVV+ Y S++ + V M E G L H ++ + I
Sbjct: 195 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM--EFLEGGALTDI-VTHTRMNEEQIAA 251
Query: 185 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVI 242
+L L LH+ +IHRD+K D+I + + G VK+ D G ++ + P + ++
Sbjct: 252 VCLAVLQALSVLHAQG--VIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLV 308
Query: 243 GTPEFMAPELYEE-EYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKP-- 299
GTP +MAPEL Y VDI+S G+ ++EMV E PY + P + K + + P
Sbjct: 309 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRL 367
Query: 300 ASLAKVNDPQIKGFIEKCLV--PASERLSAKDLLKDPFL 336
+L KV+ P +KGF+++ LV PA +R +A +LLK PFL
Sbjct: 368 KNLHKVS-PSLKGFLDRLLVRDPA-QRATAAELLKHPFL 404
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 120/219 (54%), Gaps = 16/219 (7%)
Query: 125 LYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKN 184
L++EV +++ + +NVV+ Y S++ + V M E G L H ++ + I
Sbjct: 118 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM--EFLEGGALTDI-VTHTRMNEEQIAA 174
Query: 185 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVI 242
+L L LH+ +IHRD+K D+I + + G VK+ D G ++ + P + ++
Sbjct: 175 VCLAVLQALSVLHAQG--VIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLV 231
Query: 243 GTPEFMAPELYEE-EYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKP-- 299
GTP +MAPEL Y VDI+S G+ ++EMV E PY + P + K + + P
Sbjct: 232 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRL 290
Query: 300 ASLAKVNDPQIKGFIEKCLV--PASERLSAKDLLKDPFL 336
+L KV+ P +KGF+++ LV PA +R +A +LLK PFL
Sbjct: 291 KNLHKVS-PSLKGFLDRLLVRDPA-QRATAAELLKHPFL 327
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 120/219 (54%), Gaps = 16/219 (7%)
Query: 125 LYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKN 184
L++EV +++ + +NVV+ Y S++ + V M E G L H ++ + I
Sbjct: 75 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM--EFLEGGALTDI-VTHTRMNEEQIAA 131
Query: 185 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVI 242
+L L LH+ +IHRD+K D+I + + G VK+ D G ++ + P + ++
Sbjct: 132 VCLAVLQALSVLHAQG--VIHRDIKSDSILLTHD-GRVKLSDFGFCAQVSKEVPRRKXLV 188
Query: 243 GTPEFMAPELYEE-EYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKP-- 299
GTP +MAPEL Y VDI+S G+ ++EMV E PY + P + K + + P
Sbjct: 189 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRL 247
Query: 300 ASLAKVNDPQIKGFIEKCLV--PASERLSAKDLLKDPFL 336
+L KV+ P +KGF+++ LV PA +R +A +LLK PFL
Sbjct: 248 KNLHKVS-PSLKGFLDRLLVRDPA-QRATAAELLKHPFL 284
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 120/219 (54%), Gaps = 16/219 (7%)
Query: 125 LYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKN 184
L++EV +++ + +NVV+ Y S++ + V M E G L H ++ + I
Sbjct: 73 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM--EFLEGGALTDI-VTHTRMNEEQIAA 129
Query: 185 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVI 242
+L L LH+ +IHRD+K D+I + + G VK+ D G ++ + P + ++
Sbjct: 130 VCLAVLQALSVLHAQG--VIHRDIKSDSILLTHD-GRVKLSDFGFCAQVSKEVPRRKXLV 186
Query: 243 GTPEFMAPELYEE-EYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKP-- 299
GTP +MAPEL Y VDI+S G+ ++EMV E PY + P + K + + P
Sbjct: 187 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRL 245
Query: 300 ASLAKVNDPQIKGFIEKCLV--PASERLSAKDLLKDPFL 336
+L KV+ P +KGF+++ LV PA +R +A +LLK PFL
Sbjct: 246 KNLHKVS-PSLKGFLDRLLVRDPA-QRATAAELLKHPFL 282
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 120/219 (54%), Gaps = 16/219 (7%)
Query: 125 LYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKN 184
L++EV +++ + +NVV+ Y S++ + V M E G L H ++ + I
Sbjct: 68 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM--EFLEGGALTDI-VTHTRMNEEQIAA 124
Query: 185 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVI 242
+L L LH+ +IHRD+K D+I + + G VK+ D G ++ + P + ++
Sbjct: 125 VCLAVLQALSVLHAQG--VIHRDIKSDSILLTHD-GRVKLSDFGFCAQVSKEVPRRKXLV 181
Query: 243 GTPEFMAPELYEE-EYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKP-- 299
GTP +MAPEL Y VDI+S G+ ++EMV E PY + P + K + + P
Sbjct: 182 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRL 240
Query: 300 ASLAKVNDPQIKGFIEKCLV--PASERLSAKDLLKDPFL 336
+L KV+ P +KGF+++ LV PA +R +A +LLK PFL
Sbjct: 241 KNLHKVS-PSLKGFLDRLLVRDPA-QRATAAELLKHPFL 277
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 120/219 (54%), Gaps = 16/219 (7%)
Query: 125 LYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKN 184
L++EV +++ + +NVV+ Y S++ + V M E G L H ++ + I
Sbjct: 64 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM--EFLEGGALTDI-VTHTRMNEEQIAA 120
Query: 185 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVI 242
+L L LH+ +IHRD+K D+I + + G VK+ D G ++ + P + ++
Sbjct: 121 VCLAVLQALSVLHAQG--VIHRDIKSDSILLTHD-GRVKLSDFGFCAQVSKEVPRRKXLV 177
Query: 243 GTPEFMAPELYEE-EYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKP-- 299
GTP +MAPEL Y VDI+S G+ ++EMV E PY + P + K + + P
Sbjct: 178 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRL 236
Query: 300 ASLAKVNDPQIKGFIEKCLV--PASERLSAKDLLKDPFL 336
+L KV+ P +KGF+++ LV PA +R +A +LLK PFL
Sbjct: 237 KNLHKVS-PSLKGFLDRLLVRDPA-QRATAAELLKHPFL 273
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 139/258 (53%), Gaps = 18/258 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G+G+ V A ++ +G +VA VK+ D L+ + L++EV +++ + NVV+ Y
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVA---VKMMD-LRKQQRRELLFNEVVIMRDYQHFNVVEMY 108
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
KS++ ++ V M E G L + + ++ + I +L L YLH+ +I
Sbjct: 109 KSYLVGEELWVLM--EFLQGGALTDIVSQVR-LNEEQIATVCEAVLQALAYLHAQG--VI 163
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPELYEEE-YNELV 261
HRD+K D+I + + G VK+ D G I+ P + ++GTP +MAPE+ Y V
Sbjct: 164 HRDIKSDSILLTLD-GRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEV 222
Query: 262 DIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKP--ASLAKVNDPQIKGFIEKCLV 319
DI+S G+ ++EMV E PY +P Q K++ P + KV+ P ++ F+E+ LV
Sbjct: 223 DIWSLGIMVIEMVDGEPPYFS-DSPVQAMKRLRDSPPPKLKNSHKVS-PVLRDFLERMLV 280
Query: 320 P-ASERLSAKDLLKDPFL 336
ER +A++LL PFL
Sbjct: 281 RDPQERATAQELLDHPFL 298
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 141/300 (47%), Gaps = 44/300 (14%)
Query: 84 VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKF 143
VLG+GAF V KA + A +++ L + SEV LL SL VV++
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIR-----HTEEKLSTILSEVMLLASLNHQYVVRY 67
Query: 144 YKSWVDDK---------KKTVNMITELFTSGNLRQYRKKH-KNVDIKVIKNWA--RQILH 191
Y +W++ + KK + ++ N Y H +N++ + + W RQIL
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILE 127
Query: 192 GLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--------------- 236
L Y+HS IIHRDLK NIF++ + VKIGD GLA + +
Sbjct: 128 ALSYIHSQG--IIHRDLKPMNIFIDESRN-VKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 237 -TARSVIGTPEFMAPELYE--EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 293
S IGT ++A E+ + YNE +D+YS G+ EM+ YP+S I KK+
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERVNILKKL 241
Query: 294 TS-GIKPASLAKVNDPQIKGFIEKCLVPA--SERLSAKDLLKDPFLQVENQKEPICDPLK 350
S I+ N +++ I + L+ ++R A+ LL +L V++Q E I + LK
Sbjct: 242 RSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEVIKEALK 301
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 143/302 (47%), Gaps = 48/302 (15%)
Query: 84 VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKF 143
VLG+GAF V KA + A +++ L + SEV LL SL VV++
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIR-----HTEEKLSTILSEVMLLASLNHQYVVRY 67
Query: 144 YKSWVD-----------DKKKTVNMITELFTSGNLRQYRKKH-KNVDIKVIKNWA--RQI 189
Y +W++ KK T+ + E +G L Y H +N++ + + W RQI
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTL--YDLIHSENLNQQRDEYWRLFRQI 125
Query: 190 LHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP------------- 236
L L Y+HS IIHRDLK NIF++ + VKIGD GLA + +
Sbjct: 126 LEALSYIHSQG--IIHRDLKPMNIFIDESRN-VKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 237 ---TARSVIGTPEFMAPELYE--EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFK 291
S IGT ++A E+ + YNE +D+YS G+ EM+ YP+S I K
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERVNILK 239
Query: 292 KVTS-GIKPASLAKVNDPQIKGFIEKCLVPA--SERLSAKDLLKDPFLQVENQKEPICDP 348
K+ S I+ N +++ I + L+ ++R A+ LL +L V++Q E I +
Sbjct: 240 KLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEVIKEA 299
Query: 349 LK 350
LK
Sbjct: 300 LK 301
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 134/280 (47%), Gaps = 19/280 (6%)
Query: 80 RYDEV--LGKGAFKTVYKAFDEFAGIEVAWSRVK-IDDVLQLPGDLQKLYSEVHLLKSLK 136
RY+ V LGKG+F V K D E A VK I+ D + EV LLK L
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYA---VKVINKASAKNKDTSTILREVELLKKLD 79
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYL 196
N++K ++ D + ++ EL+T G L K K +Q+ G+ Y+
Sbjct: 80 HPNIMKLFEILED--SSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYM 137
Query: 197 HSHNPPIIHRDLKCDNIFVNGNHGE--VKIGDLGLAIAMQQPTA-RSVIGTPEFMAPELY 253
H HN I+HRDLK +NI + + +KI D GL+ QQ T + IGT ++APE+
Sbjct: 138 HKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL 195
Query: 254 EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAK---VNDPQI 310
Y+E D++S G+ + +++ P+ KN I K+V +G L + ++D
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSGTPPFY-GKNEYDILKRVETGKYAFDLPQWRTISDDA- 253
Query: 311 KGFIEKCLV-PASERLSAKDLLKDPFLQVENQKEPICDPL 349
K I K L S R++A L+ P++Q + + P L
Sbjct: 254 KDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDL 293
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 139/284 (48%), Gaps = 23/284 (8%)
Query: 75 SGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKS 134
S RY + VLGKG+F V D+ G E A + V Q D + L EV LLK
Sbjct: 48 SDRY-KGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ-KTDKESLLREVQLLKQ 105
Query: 135 LKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ---YRKKHKNVDIKVIKNWARQILH 191
L N++K Y+ + D K ++ E++T G L RK+ VD I RQ+L
Sbjct: 106 LDHPNIMKLYEFFED--KGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI---IRQVLS 160
Query: 192 GLVYLHSHNPPIIHRDLKCDNIFVNGNH--GEVKIGDLGLAIAMQ-QPTARSVIGTPEFM 248
G+ Y+H + I+HRDLK +N+ + ++I D GL+ + + IGT ++
Sbjct: 161 GITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYI 218
Query: 249 APELYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASL---AKV 305
APE+ Y+E D++S G+ + +++ P++ N I KKV G L KV
Sbjct: 219 APEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGA-NEYDILKKVEKGKYTFELPQWKKV 277
Query: 306 NDPQIKGFIEKCL--VPASERLSAKDLLKDPFLQVENQKEPICD 347
++ K I K L VP S R+SA+D L ++Q +++ D
Sbjct: 278 SESA-KDLIRKMLTYVP-SMRISARDALDHEWIQTYTKEQISVD 319
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 139/284 (48%), Gaps = 23/284 (8%)
Query: 75 SGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKS 134
S RY + VLGKG+F V D+ G E A + V Q D + L EV LLK
Sbjct: 49 SDRY-KGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ-KTDKESLLREVQLLKQ 106
Query: 135 LKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ---YRKKHKNVDIKVIKNWARQILH 191
L N++K Y+ + D K ++ E++T G L RK+ VD I RQ+L
Sbjct: 107 LDHPNIMKLYEFFED--KGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI---IRQVLS 161
Query: 192 GLVYLHSHNPPIIHRDLKCDNIFVNGNH--GEVKIGDLGLAIAMQ-QPTARSVIGTPEFM 248
G+ Y+H + I+HRDLK +N+ + ++I D GL+ + + IGT ++
Sbjct: 162 GITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYI 219
Query: 249 APELYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASL---AKV 305
APE+ Y+E D++S G+ + +++ P++ N I KKV G L KV
Sbjct: 220 APEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGA-NEYDILKKVEKGKYTFELPQWKKV 278
Query: 306 NDPQIKGFIEKCL--VPASERLSAKDLLKDPFLQVENQKEPICD 347
++ K I K L VP S R+SA+D L ++Q +++ D
Sbjct: 279 SESA-KDLIRKMLTYVP-SMRISARDALDHEWIQTYTKEQISVD 320
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 139/284 (48%), Gaps = 23/284 (8%)
Query: 75 SGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKS 134
S RY + VLGKG+F V D+ G E A + V Q D + L EV LLK
Sbjct: 25 SDRY-KGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ-KTDKESLLREVQLLKQ 82
Query: 135 LKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ---YRKKHKNVDIKVIKNWARQILH 191
L N++K Y+ + D K ++ E++T G L RK+ VD I RQ+L
Sbjct: 83 LDHPNIMKLYEFFED--KGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI---IRQVLS 137
Query: 192 GLVYLHSHNPPIIHRDLKCDNIFVNGNH--GEVKIGDLGLAIAMQ-QPTARSVIGTPEFM 248
G+ Y+H + I+HRDLK +N+ + ++I D GL+ + + IGT ++
Sbjct: 138 GITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYI 195
Query: 249 APELYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASL---AKV 305
APE+ Y+E D++S G+ + +++ P++ N I KKV G L KV
Sbjct: 196 APEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGA-NEYDILKKVEKGKYTFELPQWKKV 254
Query: 306 NDPQIKGFIEKCL--VPASERLSAKDLLKDPFLQVENQKEPICD 347
++ K I K L VP S R+SA+D L ++Q +++ D
Sbjct: 255 SESA-KDLIRKMLTYVP-SMRISARDALDHEWIQTYTKEQISVD 296
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 21/272 (7%)
Query: 75 SGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKS 134
S RY R + LG GA+ V D+ G E A +K V + L EV +LK
Sbjct: 3 SDRYQRVKK-LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTT-TSNSGALLDEVAVLKQ 60
Query: 135 LKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ---YRKKHKNVDIKVIKNWARQILH 191
L N++K Y+ + D K+ ++ E++ G L R+K VD VI +Q+L
Sbjct: 61 LDHPNIMKLYEFFED--KRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVI---MKQVLS 115
Query: 192 GLVYLHSHNPPIIHRDLKCDNIFVNGNHGE--VKIGDLGLAIAMQ-QPTARSVIGTPEFM 248
G YLH HN I+HRDLK +N+ + + +KI D GL+ + + +GT ++
Sbjct: 116 GTTYLHKHN--IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYI 173
Query: 249 APELYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG---IKPASLAKV 305
APE+ ++Y+E D++S G+ IL ++ YP + +I K+V G P +V
Sbjct: 174 APEVLRKKYDEKCDVWSCGV-ILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQV 232
Query: 306 NDPQIKGFIEKCLV-PASERLSAKDLLKDPFL 336
+D + K ++ L S+R+SA++ L P++
Sbjct: 233 SD-EAKQLVKLMLTYEPSKRISAEEALNHPWI 263
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 21/272 (7%)
Query: 75 SGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKS 134
S RY R + LG GA+ V D+ G E A +K V + L EV +LK
Sbjct: 20 SDRYQRVKK-LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTT-TSNSGALLDEVAVLKQ 77
Query: 135 LKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ---YRKKHKNVDIKVIKNWARQILH 191
L N++K Y+ + D K+ ++ E++ G L R+K VD VI +Q+L
Sbjct: 78 LDHPNIMKLYEFFED--KRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVI---MKQVLS 132
Query: 192 GLVYLHSHNPPIIHRDLKCDNIFVNGNHGE--VKIGDLGLAIAMQ-QPTARSVIGTPEFM 248
G YLH HN I+HRDLK +N+ + + +KI D GL+ + + +GT ++
Sbjct: 133 GTTYLHKHN--IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYI 190
Query: 249 APELYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG---IKPASLAKV 305
APE+ ++Y+E D++S G+ IL ++ YP + +I K+V G P +V
Sbjct: 191 APEVLRKKYDEKCDVWSCGV-ILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQV 249
Query: 306 NDPQIKGFIEKCLV-PASERLSAKDLLKDPFL 336
+D + K ++ L S+R+SA++ L P++
Sbjct: 250 SD-EAKQLVKLMLTYEPSKRISAEEALNHPWI 280
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 140/284 (49%), Gaps = 20/284 (7%)
Query: 77 RYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLK 136
RY+R LGKG F Y+ D EV +V +L P +K+ +E+ + KSL
Sbjct: 43 RYMR-GRFLGKGGFAKCYEITD-MDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYL 196
+ +VV F+ + DD V ++ E+ +L + K+ K V + + RQ + G+ YL
Sbjct: 101 NPHVVGFHGFFEDDD--FVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 158
Query: 197 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR--SVIGTPEFMAPE-LY 253
H++ +IHRDLK N+F+N + +VKIGD GLA ++ R ++ GTP ++APE L
Sbjct: 159 HNNR--VIHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLC 215
Query: 254 EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGF 313
++ ++ VDI+S G CIL + P E + + ++ S+ + +P
Sbjct: 216 KKGHSFEVDIWSLG-CILYTLLVGKPPFETSCLKETYIRIKKN--EYSVPRHINPVASAL 272
Query: 314 IEKCL-VPASERLSAKDLLKDPFLQVENQKEPICDPLKLPIQSL 356
I + L + R S +LL D F P++LP L
Sbjct: 273 IRRMLHADPTLRPSVAELLTDEFFTSGYA------PMRLPTSCL 310
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 140/300 (46%), Gaps = 19/300 (6%)
Query: 55 GMLGTAEPPDADSDFVEKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDD 114
G G+ + PD F + DP + E+ G G+F VY A D VA ++
Sbjct: 33 GRAGSLKDPDVAELFFKDDPEKLFSDLREI-GHGSFGAVYFARDVRNSEVVAIKKMSYSG 91
Query: 115 VLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH 174
Q Q + EV L+ L+ N +++ ++ + + M L ++ +L + KK
Sbjct: 92 K-QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKP 150
Query: 175 -KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM 233
+ V+I + + A L GL YLHSHN +IHRD+K NI ++ G VK+GD G A M
Sbjct: 151 LQEVEIAAVTHGA---LQGLAYLHSHN--MIHRDVKAGNILLS-EPGLVKLGDFGSASIM 204
Query: 234 QQPTARSVIGTPEFMAPELY----EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQI 289
A +GTP +MAPE+ E +Y+ VD++S G+ +E+ + P N
Sbjct: 205 A--PANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM-NAMSA 261
Query: 290 FKKVTSGIKPASLAKVNDPQIKGFIEKCL--VPASERLSAKDLLKDPFLQVENQKEPICD 347
+ PA + + F++ CL +P +R +++ LLK F+ E I D
Sbjct: 262 LYHIAQNESPALQSGHWSEYFRNFVDSCLQKIP-QDRPTSEVLLKHRFVLRERPPTVIMD 320
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 139/284 (48%), Gaps = 20/284 (7%)
Query: 77 RYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLK 136
RY+R LGKG F Y+ D EV +V +L P +K+ +E+ + KSL
Sbjct: 43 RYMR-GRFLGKGGFAKCYEITD-MDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYL 196
+ +VV F+ + DD V ++ E+ +L + K+ K V + + RQ + G+ YL
Sbjct: 101 NPHVVGFHGFFEDDD--FVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 158
Query: 197 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS--VIGTPEFMAPE-LY 253
H++ +IHRDLK N+F+N + +VKIGD GLA ++ R + GTP ++APE L
Sbjct: 159 HNNR--VIHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLC 215
Query: 254 EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGF 313
++ ++ VDI+S G CIL + P E + + ++ S+ + +P
Sbjct: 216 KKGHSFEVDIWSLG-CILYTLLVGKPPFETSCLKETYIRIKKN--EYSVPRHINPVASAL 272
Query: 314 IEKCL-VPASERLSAKDLLKDPFLQVENQKEPICDPLKLPIQSL 356
I + L + R S +LL D F P++LP L
Sbjct: 273 IRRMLHADPTLRPSVAELLTDEFFTSGYA------PMRLPTSCL 310
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 140/286 (48%), Gaps = 20/286 (6%)
Query: 77 RYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLK 136
RY+R LGKG F Y+ D EV +V +L P +K+ +E+ + KSL
Sbjct: 27 RYMR-GRFLGKGGFAKCYEITD-MDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 84
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYL 196
+ +VV F+ + DD V ++ E+ +L + K+ K V + + RQ + G+ YL
Sbjct: 85 NPHVVGFHGFFEDDD--FVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 142
Query: 197 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS--VIGTPEFMAPE-LY 253
H++ +IHRDLK N+F+N + +VKIGD GLA ++ R + GTP ++APE L
Sbjct: 143 HNNR--VIHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLC 199
Query: 254 EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGF 313
++ ++ VDI+S G CIL + P E + + ++ S+ + +P
Sbjct: 200 KKGHSFEVDIWSLG-CILYTLLVGKPPFETSCLKETYIRIKKN--EYSVPRHINPVASAL 256
Query: 314 IEKCL-VPASERLSAKDLLKDPFLQVENQKEPICDPLKLPIQSLKM 358
I + L + R S +LL D F P++LP L +
Sbjct: 257 IRRMLHADPTLRPSVAELLTDEFFTSGYA------PMRLPTSCLTV 296
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 130/273 (47%), Gaps = 17/273 (6%)
Query: 80 RYDEV--LGKGAFKTVYKAFDEFAGIEVAWSRVK-IDDVLQLPGDLQKLYSEVHLLKSLK 136
RY+ V LGKG+F V K D E A VK I+ D + EV LLK L
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYA---VKVINKASAKNKDTSTILREVELLKKLD 79
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYL 196
N++K ++ D + ++ EL+T G L K K +Q+ G+ Y+
Sbjct: 80 HPNIMKLFEILEDSS--SFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYM 137
Query: 197 HSHNPPIIHRDLKCDNIFVNGNHGE--VKIGDLGLAIAMQQPTA-RSVIGTPEFMAPELY 253
H HN I+HRDLK +NI + + +KI D GL+ QQ T + IGT ++APE+
Sbjct: 138 HKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL 195
Query: 254 EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLA--KVNDPQIK 311
Y+E D++S G+ + +++ P+ KN I K+V +G L + K
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSGTPPFYG-KNEYDILKRVETGKYAFDLPQWRTISDDAK 254
Query: 312 GFIEKCLV-PASERLSAKDLLKDPFLQVENQKE 343
I K L S R++A L+ P++Q + +E
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWIQKYSSEE 287
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 139/284 (48%), Gaps = 20/284 (7%)
Query: 77 RYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLK 136
RY+R LGKG F Y+ D EV +V +L P +K+ +E+ + KSL
Sbjct: 43 RYMR-GRFLGKGGFAKCYEITD-MDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYL 196
+ +VV F+ + DD V ++ E+ +L + K+ K V + + RQ + G+ YL
Sbjct: 101 NPHVVGFHGFFEDDD--FVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 158
Query: 197 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS--VIGTPEFMAPE-LY 253
H++ +IHRDLK N+F+N + +VKIGD GLA ++ R + GTP ++APE L
Sbjct: 159 HNNR--VIHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLC 215
Query: 254 EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGF 313
++ ++ VDI+S G CIL + P E + + ++ S+ + +P
Sbjct: 216 KKGHSFEVDIWSLG-CILYTLLVGKPPFETSCLKETYIRIKKN--EYSVPRHINPVASAL 272
Query: 314 IEKCL-VPASERLSAKDLLKDPFLQVENQKEPICDPLKLPIQSL 356
I + L + R S +LL D F P++LP L
Sbjct: 273 IRRMLHADPTLRPSVAELLTDEFFTSGYA------PMRLPTSCL 310
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 127/267 (47%), Gaps = 17/267 (6%)
Query: 80 RYDEV--LGKGAFKTVYKAFDEFAGIEVAWSRVK-IDDVLQLPGDLQKLYSEVHLLKSLK 136
RY+ V LGKG+F V K D E A VK I+ D + EV LLK L
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYA---VKVINKASAKNKDTSTILREVELLKKLD 79
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYL 196
N++K ++ D + ++ EL+T G L K K +Q+ G+ Y+
Sbjct: 80 HPNIMKLFEILEDSS--SFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYM 137
Query: 197 HSHNPPIIHRDLKCDNIFVNGNHGE--VKIGDLGLAIAMQQPTA-RSVIGTPEFMAPELY 253
H HN I+HRDLK +NI + + +KI D GL+ QQ T + IGT ++APE+
Sbjct: 138 HKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL 195
Query: 254 EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLA--KVNDPQIK 311
Y+E D++S G+ + +++ P+ KN I K+V +G L + K
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSGTPPFYG-KNEYDILKRVETGKYAFDLPQWRTISDDAK 254
Query: 312 GFIEKCLV-PASERLSAKDLLKDPFLQ 337
I K L S R++A L+ P++Q
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 138/280 (49%), Gaps = 23/280 (8%)
Query: 75 SGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKS 134
S RY + VLGKG+F V D+ G E A + V Q D + L EV LLK
Sbjct: 31 SDRY-KGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ-KTDKESLLREVQLLKQ 88
Query: 135 LKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ---YRKKHKNVDIKVIKNWARQILH 191
L N++K Y+ + D K ++ E++T G L RK+ VD I RQ+L
Sbjct: 89 LDHPNIMKLYEFFED--KGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI---IRQVLS 143
Query: 192 GLVYLHSHNPPIIHRDLKCDNIFVNGNH--GEVKIGDLGLAIAMQ-QPTARSVIGTPEFM 248
G+ Y+H + I+HRDLK +N+ + ++I D GL+ + + IGT ++
Sbjct: 144 GITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYI 201
Query: 249 APELYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASL---AKV 305
APE+ Y+E D++S G+ + +++ P++ N I KKV G L KV
Sbjct: 202 APEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGA-NEYDILKKVEKGKYTFELPQWKKV 260
Query: 306 NDPQIKGFIEKCL--VPASERLSAKDLLKDPFLQVENQKE 343
++ K I K L VP S R+SA+D L ++Q +++
Sbjct: 261 SESA-KDLIRKMLTYVP-SMRISARDALDHEWIQTYTKEQ 298
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 137/284 (48%), Gaps = 23/284 (8%)
Query: 75 SGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKS 134
S RY + VLGKG+F V D+ G E A + V Q D + L EV LLK
Sbjct: 25 SDRY-KGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ-KTDKESLLREVQLLKQ 82
Query: 135 LKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ---YRKKHKNVDIKVIKNWARQILH 191
L N+ K Y+ + D K ++ E++T G L RK+ VD I RQ+L
Sbjct: 83 LDHPNIXKLYEFFED--KGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI---IRQVLS 137
Query: 192 GLVYLHSHNPPIIHRDLKCDNIFVNGNH--GEVKIGDLGLAIAMQ-QPTARSVIGTPEFM 248
G+ Y H + I+HRDLK +N+ + ++I D GL+ + + IGT ++
Sbjct: 138 GITYXHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYI 195
Query: 249 APELYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASL---AKV 305
APE+ Y+E D++S G+ + +++ P++ N I KKV G L KV
Sbjct: 196 APEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGA-NEYDILKKVEKGKYTFELPQWKKV 254
Query: 306 NDPQIKGFIEKCL--VPASERLSAKDLLKDPFLQVENQKEPICD 347
++ K I K L VP S R+SA+D L ++Q +++ D
Sbjct: 255 SESA-KDLIRKXLTYVP-SXRISARDALDHEWIQTYTKEQISVD 296
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 155/328 (47%), Gaps = 21/328 (6%)
Query: 58 GTAEPPDADSDFVEKDPSGRYVRYDE-VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVL 116
G+A PP + V DP R LGKG F ++ D EV ++ +L
Sbjct: 1 GSAAPPAKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTK-EVFAGKIVPKSLL 59
Query: 117 QLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKN 176
P +K+ E+ + +SL +VV F+ + D+ V ++ EL +L + K+ K
Sbjct: 60 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVFVVLELCRRRSLLELHKRRKA 117
Query: 177 VDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP 236
+ + + RQI+ G YLH + +IHRDLK N+F+N + EVKIGD GLA ++
Sbjct: 118 LTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYD 174
Query: 237 TAR--SVIGTPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 293
R ++ GTP ++APE+ ++ + VD++S G CI+ + P E + + ++
Sbjct: 175 GERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIG-CIMYTLLVGKPPFETSCLKETYLRI 233
Query: 294 TSGIKPASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQVENQKEPICDPLKLP 352
S+ K +P I+K L + R + +LL D F P +LP
Sbjct: 234 KKN--EYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYI------PARLP 285
Query: 353 IQSLKMLRLPMSGPSSMDIDSDYKQLSL 380
I L + PSS+D S+ K L++
Sbjct: 286 ITCLTIPPRFSIAPSSLD-PSNRKPLTV 312
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 142/280 (50%), Gaps = 18/280 (6%)
Query: 76 GRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQL-PGDLQKLYSEVHLLKS 134
G Y R + +GKG F V A G EVA VKI D QL P LQKL+ EV ++K
Sbjct: 15 GNY-RLQKTIGKGNFAKVKLARHVLTGREVA---VKIIDKTQLNPTSLQKLFREVRIMKI 70
Query: 135 LKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLV 194
L N+VK ++ V + +KT+ ++ E + G + Y H + K + RQI+ +
Sbjct: 71 LNHPNIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 128
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA-RSVIGTPEFMAPELY 253
Y H I+HRDLK +N+ ++G+ +KI D G + + G+P + APEL+
Sbjct: 129 YCHQKY--IVHRDLKAENLLLDGDMN-IKIADFGFSNEFTVGNKLDTFCGSPPYAAPELF 185
Query: 254 E-EEYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIK 311
+ ++Y+ VD++S G+ + +V+ P+ + +N ++ ++V G D +
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENL 244
Query: 312 GFIEKCLVPASERLSAKDLLKDPFLQVENQKE---PICDP 348
L P +R S + ++KD ++ V +++E P +P
Sbjct: 245 LKKLLVLNPI-KRGSLEQIMKDRWMNVGHEEEELKPYTEP 283
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 23/205 (11%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E LG G + TVYK ++ G+ VA VK+D P + E+ L+K LK +N+V+
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIR---EISLMKELKHENIVR 67
Query: 143 FYKSWVDDKKKTVNMITEL--FTSGNLRQYRKKH------KNVDIKVIKNWARQILHGLV 194
Y D T N +T + F +L++Y + +++ ++K + Q+L GL
Sbjct: 68 LY-----DVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPEL 252
+ H + I+HRDLK N+ +N G++K+GD GLA A P T S + T + AP++
Sbjct: 123 FCHENK--ILHRDLKPQNLLIN-KRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDV 179
Query: 253 Y--EEEYNELVDIYSFGMCILEMVT 275
Y+ +DI+S G + EM+T
Sbjct: 180 LMGSRTYSTSIDIWSCGCILAEMIT 204
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 138/310 (44%), Gaps = 64/310 (20%)
Query: 84 VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKF 143
VLG+GAF V KA + A +++ L + SEV LL SL VV++
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIR-----HTEEKLSTILSEVXLLASLNHQYVVRY 67
Query: 144 YKSWVDD----------KKKTVNMIT----------ELFTSGNLRQYRKKHKNVDIKVIK 183
Y +W++ KKK+ I +L S NL Q R ++
Sbjct: 68 YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY--------- 118
Query: 184 NWA--RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP----- 236
W RQIL L Y+HS IIHR+LK NIF++ + VKIGD GLA + +
Sbjct: 119 -WRLFRQILEALSYIHSQG--IIHRNLKPXNIFIDESRN-VKIGDFGLAKNVHRSLDILK 174
Query: 237 -----------TARSVIGTPEFMAPELYE--EEYNELVDIYSFGMCILEMVTFEYPYSEC 283
S IGT ++A E+ + YNE +D YS G+ E + YP+S
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI---YPFSTG 231
Query: 284 KNPAQIFKKVTS-GIKPASLAKVNDPQIKGFIEKCLVPA--SERLSAKDLLKDPFLQVEN 340
I KK+ S I+ N +++ I + L+ ++R A+ LL +L V++
Sbjct: 232 XERVNILKKLRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKH 291
Query: 341 QKEPICDPLK 350
Q E I + LK
Sbjct: 292 QDEVIKEALK 301
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 135/258 (52%), Gaps = 26/258 (10%)
Query: 74 PSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ-LPGDLQKLYSEVHLL 132
P G+ + + +G G+F TVYK ++ G +VA VK+ +V P LQ +EV +L
Sbjct: 10 PDGQ-ITVGQRIGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVL 62
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNWARQILH 191
+ + N++ F K + ++T+ +L + ++K + + ARQ
Sbjct: 63 RKTRHVNILLFMGY---STKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTAR 119
Query: 192 GLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA----RSVIGTPEF 247
G+ YLH+ + IIHRDLK +NIF++ ++ VKIGD GLA + + + G+ +
Sbjct: 120 GMDYLHAKS--IIHRDLKSNNIFLHEDN-TVKIGDFGLATVKSRWSGSHQFEQLSGSILW 176
Query: 248 MAPELYEEE----YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLA 303
MAPE+ + Y+ D+Y+FG+ + E++T + PYS N QI + V G L+
Sbjct: 177 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLS 236
Query: 304 KV--NDP-QIKGFIEKCL 318
KV N P ++K + +CL
Sbjct: 237 KVRSNCPKRMKRLMAECL 254
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 128/265 (48%), Gaps = 14/265 (5%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G V+K + +G+ +A + ++ P ++ E+ +L +V FY
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIK---PAIRNQIIRELQVLHECNSPYIVGFY 89
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
++ D + ++ M E G+L Q KK + +++ + ++ GL YL + I+
Sbjct: 90 GAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 146
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDI 263
HRD+K NI VN + GE+K+ D G++ + A S +GT +M+PE L Y+ DI
Sbjct: 147 HRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 205
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIK---PASLAKVNDPQIKGFIEKCLV- 319
+S G+ ++EM YP IF+ + + P + V + + F+ KCL+
Sbjct: 206 WSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIK 265
Query: 320 -PASERLSAKDLLKDPFLQVENQKE 343
PA ER K L+ F++ + +E
Sbjct: 266 NPA-ERADLKQLMVHAFIKRSDAEE 289
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 145/300 (48%), Gaps = 20/300 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F ++ D EV ++ +L P +K+ E+ + +SL +VV F+
Sbjct: 25 LGKGGFAKCFEISDADTK-EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D+ V ++ EL +L + K+ K + + + RQI+ G YLH + +I
Sbjct: 84 GFFEDND--FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--VI 139
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR--SVIGTPEFMAPELYEEEYNEL-V 261
HRDLK N+F+N + EVKIGD GLA ++ R ++ GTP ++APE+ ++ + V
Sbjct: 140 HRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV 198
Query: 262 DIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL-VP 320
D++S G CI+ + P E + + ++ S+ K +P I+K L
Sbjct: 199 DVWSIG-CIMYTLLVGKPPFETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQTD 255
Query: 321 ASERLSAKDLLKDPFLQVENQKEPICDPLKLPIQSLKMLRLPMSGPSSMDIDSDYKQLSL 380
+ R + +LL D F P +LPI L + PSS+D S+ K L++
Sbjct: 256 PTARPTINELLNDEFFTSGYI------PARLPITCLTIPPXFSIAPSSLD-PSNRKPLTV 308
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 135/258 (52%), Gaps = 26/258 (10%)
Query: 74 PSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ-LPGDLQKLYSEVHLL 132
P G+ + + +G G+F TVYK ++ G +VA VK+ +V P LQ +EV +L
Sbjct: 22 PDGQ-ITVGQRIGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVL 74
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNWARQILH 191
+ + N++ F K + ++T+ +L + ++K + + ARQ
Sbjct: 75 RKTRHVNILLFMGY---STKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTAR 131
Query: 192 GLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA----RSVIGTPEF 247
G+ YLH+ + IIHRDLK +NIF++ ++ VKIGD GLA + + + G+ +
Sbjct: 132 GMDYLHAKS--IIHRDLKSNNIFLHEDN-TVKIGDFGLATEKSRWSGSHQFEQLSGSILW 188
Query: 248 MAPELYEEE----YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLA 303
MAPE+ + Y+ D+Y+FG+ + E++T + PYS N QI + V G L+
Sbjct: 189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLS 248
Query: 304 KV--NDP-QIKGFIEKCL 318
KV N P ++K + +CL
Sbjct: 249 KVRSNCPKRMKRLMAECL 266
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 145/300 (48%), Gaps = 20/300 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F ++ D EV ++ +L P +K+ E+ + +SL +VV F+
Sbjct: 25 LGKGGFAKCFEISDADTK-EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D+ V ++ EL +L + K+ K + + + RQI+ G YLH + +I
Sbjct: 84 GFFEDND--FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--VI 139
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR--SVIGTPEFMAPELYEEEYNEL-V 261
HRDLK N+F+N + EVKIGD GLA ++ R ++ GTP ++APE+ ++ + V
Sbjct: 140 HRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV 198
Query: 262 DIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL-VP 320
D++S G CI+ + P E + + ++ S+ K +P I+K L
Sbjct: 199 DVWSIG-CIMYTLLVGKPPFETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQTD 255
Query: 321 ASERLSAKDLLKDPFLQVENQKEPICDPLKLPIQSLKMLRLPMSGPSSMDIDSDYKQLSL 380
+ R + +LL D F P +LPI L + PSS+D S+ K L++
Sbjct: 256 PTARPTINELLNDEFFTSGYI------PARLPITCLTIPPRFSIAPSSLD-PSNRKPLTV 308
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 100/178 (56%), Gaps = 10/178 (5%)
Query: 123 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNL-RQYRKKHKNVDIKV 181
+++Y+E+ LLKSL N++K + + D KK ++TE + G L Q +HK D
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFED--KKYFYLVTEFYEGGELFEQIINRHK-FDECD 147
Query: 182 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHG--EVKIGDLGLAIAMQQP-TA 238
N +QIL G+ YLH HN I+HRD+K +NI + + +KI D GL+ +
Sbjct: 148 AANIMKQILSGICYLHKHN--IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKL 205
Query: 239 RSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
R +GT ++APE+ +++YNE D++S G+ I+ ++ YP +N I KKV G
Sbjct: 206 RDRLGTAYYIAPEVLKKKYNEKCDVWSCGV-IMYILLCGYPPFGGQNDQDIIKKVEKG 262
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 147/308 (47%), Gaps = 32/308 (10%)
Query: 72 KDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQK-LYSEVH 130
+DP+G + E++G G + VYK G V ++ V+ + GD ++ + E++
Sbjct: 20 RDPAGIF-ELVELVGNGTYGQVYK------GRHVKTGQLAAIKVMDVTGDEEEEIKQEIN 72
Query: 131 LLKSLKDD-NVVKFYKSWVDDKKKTVN----MITELFTSGNLRQYRKKHKNVDIKVIKNW 185
+LK N+ +Y +++ ++ ++ E +G++ K K +K + W
Sbjct: 73 MLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLK--EEW 130
Query: 186 ----ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR-- 239
R+IL GL +LH H +IHRD+K N+ + N EVK+ D G++ + + R
Sbjct: 131 IAYICREILRGLSHLHQHK--VIHRDIKGQNVLLTEN-AEVKLVDFGVSAQLDRTVGRRN 187
Query: 240 SVIGTPEFMAPELY------EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 293
+ IGTP +MAPE+ + Y+ D++S G+ +EM P + +P + +
Sbjct: 188 TFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM-HPMRALFLI 246
Query: 294 TSGIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQVENQKEPICDPLKLP 352
P +K + + FIE CLV S+R + + L+K PF++ + + + LK
Sbjct: 247 PRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPNERQVRIQLKDH 306
Query: 353 IQSLKMLR 360
I K R
Sbjct: 307 IDRTKKKR 314
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 133/273 (48%), Gaps = 29/273 (10%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG GAF VYKA ++ + A K+ D + +L+ E+ +L S N+VK
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAA---AKVIDT-KSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 145 KSWVDDKKKTVNMITELFTSGN----LRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
++ + + ++ E G + + + I+V+ +Q L L YLH +
Sbjct: 101 DAFY--YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVV---CKQTLDALNYLHDNK 155
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR--SVIGTPEFMAPELYEEE-- 256
IIHRDLK NI + G++K+ D G++ + R S IGTP +MAPE+ E
Sbjct: 156 --IIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 257 ----YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVN--DPQI 310
Y+ D++S G+ ++EM E P+ E NP ++ K+ +P +LA+ +
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPPHHEL-NPMRVLLKIAKS-EPPTLAQPSRWSSNF 270
Query: 311 KGFIEKCLVP-ASERLSAKDLLKDPFLQVENQK 342
K F++KCL R + LL+ PF+ V++ K
Sbjct: 271 KDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNK 303
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 138/295 (46%), Gaps = 19/295 (6%)
Query: 63 PDADSDFVEKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDL 122
PD F + DP + E+ G G+F VY A D VA ++ Q
Sbjct: 2 PDVAELFFKDDPEKLFSDLREI-GHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEKW 59
Query: 123 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH-KNVDIKV 181
Q + EV L+ L+ N +++ ++ + + M L ++ +L + KK + V+I
Sbjct: 60 QDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA 119
Query: 182 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV 241
+ + A L GL YLHSHN +IHRD+K NI ++ G VK+GD G A M A
Sbjct: 120 VTHGA---LQGLAYLHSHN--MIHRDVKAGNILLS-EPGLVKLGDFGSASIM--APANXF 171
Query: 242 IGTPEFMAPELY----EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGI 297
+GTP +MAPE+ E +Y+ VD++S G+ +E+ + P N +
Sbjct: 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM-NAMSALYHIAQNE 230
Query: 298 KPASLAKVNDPQIKGFIEKCL--VPASERLSAKDLLKDPFLQVENQKEPICDPLK 350
PA + + F++ CL +P +R +++ LLK F+ E I D ++
Sbjct: 231 SPALQSGHWSEYFRNFVDSCLQKIP-QDRPTSEVLLKHRFVLRERPPTVIMDLIQ 284
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 133/273 (48%), Gaps = 29/273 (10%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG GAF VYKA ++ + A K+ D + +L+ E+ +L S N+VK
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAA---AKVIDT-KSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 145 KSWVDDKKKTVNMITELFTSGN----LRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
++ + + ++ E G + + + I+V+ +Q L L YLH +
Sbjct: 101 DAFY--YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVV---CKQTLDALNYLHDNK 155
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR--SVIGTPEFMAPELYEEE-- 256
IIHRDLK NI + G++K+ D G++ + R S IGTP +MAPE+ E
Sbjct: 156 --IIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 257 ----YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVN--DPQI 310
Y+ D++S G+ ++EM E P+ E NP ++ K+ +P +LA+ +
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPPHHEL-NPMRVLLKIAKS-EPPTLAQPSRWSSNF 270
Query: 311 KGFIEKCLVP-ASERLSAKDLLKDPFLQVENQK 342
K F++KCL R + LL+ PF+ V++ K
Sbjct: 271 KDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNK 303
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 144/300 (48%), Gaps = 20/300 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F ++ D EV ++ +L P +K+ E+ + +SL +VV F+
Sbjct: 49 LGKGGFAKCFEISDADTK-EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D+ V ++ EL +L + K+ K + + + RQI+ G YLH + +I
Sbjct: 108 GFFEDND--FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--VI 163
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS--VIGTPEFMAPELYEEEYNEL-V 261
HRDLK N+F+N + EVKIGD GLA ++ R + GTP ++APE+ ++ + V
Sbjct: 164 HRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 222
Query: 262 DIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL-VP 320
D++S G CI+ + P E + + ++ S+ K +P I+K L
Sbjct: 223 DVWSIG-CIMYTLLVGKPPFETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQTD 279
Query: 321 ASERLSAKDLLKDPFLQVENQKEPICDPLKLPIQSLKMLRLPMSGPSSMDIDSDYKQLSL 380
+ R + +LL D F P +LPI L + PSS+D S+ K L++
Sbjct: 280 PTARPTINELLNDEFFTSGYI------PARLPITCLTIPPRFSIAPSSLD-PSNRKPLTV 332
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 130/263 (49%), Gaps = 21/263 (7%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG GA+ V D+ +E A ++ V KL EV +LK L N++K Y
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSN--SKLLEEVAVLKLLDHPNIMKLY 102
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQ---YRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
+ D K+ ++ E + G L +R K VD VI +Q+L G+ YLH HN
Sbjct: 103 DFFED--KRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVI---IKQVLSGVTYLHKHN- 156
Query: 202 PIIHRDLKCDNIFVNGNHGE--VKIGDLGL-AIAMQQPTARSVIGTPEFMAPELYEEEYN 258
I+HRDLK +N+ + + +KI D GL A+ Q + +GT ++APE+ ++Y+
Sbjct: 157 -IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYD 215
Query: 259 ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG---IKPASLAKVNDPQIKGFIE 315
E D++S G+ IL ++ YP + +I +KV G V++ K I+
Sbjct: 216 EKCDVWSIGV-ILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGA-KDLIK 273
Query: 316 KCL-VPASERLSAKDLLKDPFLQ 337
+ L + R+SA+ L+ P+++
Sbjct: 274 QMLQFDSQRRISAQQALEHPWIK 296
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 132/270 (48%), Gaps = 23/270 (8%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPG-DLQKLYSEVHLLKSLKDDNVV 141
EV+GKGAF V + + G + A V + PG + L E + LK ++V
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDI----KVIKNWARQILHGLVYLH 197
+ +++ D + M+ E +L K + V ++ RQIL L Y H
Sbjct: 90 ELLETYSSD--GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 198 SHNPPIIHRDLKCDNIFVNG--NHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELY 253
+N IIHRD+K +N+ + N VK+GD G+AI + + A +GTP FMAPE+
Sbjct: 148 DNN--IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 254 EEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG---IKPASLAKVNDPQ 309
+ E Y + VD++ G+ + +++ P+ K ++F+ + G + P + +++
Sbjct: 206 KREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RLFEGIIKGKYKMNPRQWSHISE-S 262
Query: 310 IKGFIEKCLV--PASERLSAKDLLKDPFLQ 337
K + + L+ PA ER++ + L P+L+
Sbjct: 263 AKDLVRRMLMLDPA-ERITVYEALNHPWLK 291
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 144/300 (48%), Gaps = 20/300 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F ++ D EV ++ +L P +K+ E+ + +SL +VV F+
Sbjct: 47 LGKGGFAKCFEISDADTK-EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D+ V ++ EL +L + K+ K + + + RQI+ G YLH + +I
Sbjct: 106 GFFEDND--FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--VI 161
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS--VIGTPEFMAPELYEEEYNEL-V 261
HRDLK N+F+N + EVKIGD GLA ++ R + GTP ++APE+ ++ + V
Sbjct: 162 HRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 220
Query: 262 DIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL-VP 320
D++S G CI+ + P E + + ++ S+ K +P I+K L
Sbjct: 221 DVWSIG-CIMYTLLVGKPPFETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQTD 277
Query: 321 ASERLSAKDLLKDPFLQVENQKEPICDPLKLPIQSLKMLRLPMSGPSSMDIDSDYKQLSL 380
+ R + +LL D F P +LPI L + PSS+D S+ K L++
Sbjct: 278 PTARPTINELLNDEFFTSGYI------PARLPITCLTIPPRFSIAPSSLD-PSNRKPLTV 330
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 125/265 (47%), Gaps = 32/265 (12%)
Query: 52 FLSGMLGTAEPPDADSDFVEKDPSG---RYVRYDEVLGKGAFKTV----YKAFDEFAGIE 104
+ G +G+A F ++DP+ R++++ + LGKG F +V Y + G
Sbjct: 21 YFQGAMGSA--------FEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV 72
Query: 105 VAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTS 164
VA +++ L+ E+ +LKSL+ DN+VK+ ++ + +I E
Sbjct: 73 VAVKKLQ----HSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 128
Query: 165 GNLRQYRKKHK-NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 223
G+LR Y +KHK +D + + QI G+ YL + IHRDL NI V N VK
Sbjct: 129 GSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVK 185
Query: 224 IGDLGLAIAMQQPTARSVIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFE 277
IGD GL + Q + P + APE L E +++ D++SFG+ + E+ T+
Sbjct: 186 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY- 244
Query: 278 YPYSECKNPAQIFKKVTSGIKPASL 302
+ K+P F ++ K +
Sbjct: 245 --IEKSKSPPAEFMRMIGNDKQGQM 267
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 130/270 (48%), Gaps = 18/270 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G V+K + +G+ +A + ++ P ++ E+ +L +V FY
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE---IKPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
++ D + ++ M E G+L Q KK + +++ + ++ GL YL + I+
Sbjct: 71 GAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 127
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDI 263
HRD+K NI VN + GE+K+ D G++ + A S +GT +M+PE L Y+ DI
Sbjct: 128 HRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 186
Query: 264 YSFGMCILEMVTFEYPY------SECKNPAQIFK---KVTSGIKPASLAKVNDPQIKGFI 314
+S G+ ++EM YP + + P IF+ + + P + V + + F+
Sbjct: 187 WSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFV 246
Query: 315 EKCLVP-ASERLSAKDLLKDPFLQVENQKE 343
KCL+ +ER K L+ F++ + +E
Sbjct: 247 NKCLIKNPAERADLKQLMVHAFIKRSDAEE 276
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 135/287 (47%), Gaps = 35/287 (12%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
EV+G GA V A+ +VA R+ ++ + + +L E+ + N+V
Sbjct: 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLE---KCQTSMDELLKEIQAMSQCHHPNIVS 77
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRK------KHKN--VDIKVIKNWARQILHGLV 194
+Y S+V K + ++ +L + G++ K +HK+ +D I R++L GL
Sbjct: 78 YYTSFV--VKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 135
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM-------QQPTARSVIGTPEF 247
YLH + IHRD+K NI + G G V+I D G++ + + ++ +GTP +
Sbjct: 136 YLHKNGQ--IHRDVKAGNILL-GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCW 192
Query: 248 MAPELYEE--EYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFK--------KVTSGI 297
MAPE+ E+ Y+ DI+SFG+ +E+ T PY + P ++ + +G+
Sbjct: 193 MAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYP-PMKVLMLTLQNDPPSLETGV 251
Query: 298 KPASLAKVNDPQIKGFIEKCLVPASE-RLSAKDLLKDPFLQVENQKE 343
+ + K + I CL E R +A +LL+ F Q KE
Sbjct: 252 QDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKE 298
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 138/282 (48%), Gaps = 31/282 (10%)
Query: 73 DPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLL 132
DP + + + + GKG+F V+K D VA +KI D+ + +++ + E+ +L
Sbjct: 20 DPEELFTKLERI-GKGSFGEVFKGIDNRTQQVVA---IKIIDLEEAEDEIEDIQQEITVL 75
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNM-------ITELFTSGNLRQYRKKHKNVDIKVIKNW 185
V K+Y S++ K + M +L +G +++ I
Sbjct: 76 SQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQ----------IATM 125
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIG 243
++IL GL YLHS IHRD+K N+ ++ G+VK+ D G+A + Q + +G
Sbjct: 126 LKEILKGLDYLHSEKK--IHRDIKAANVLLS-EQGDVKLADFGVAGQLTDTQIKRNTFVG 182
Query: 244 TPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASL 302
TP +MAPE+ ++ Y+ DI+S G+ +E+ E P S+ +P ++ + P +L
Sbjct: 183 TPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDM-HPMRVLFLIPKN-NPPTL 240
Query: 303 AKVNDPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQVENQKE 343
K FI+ CL S R +AK+LLK F+ V+N K+
Sbjct: 241 VGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFI-VKNSKK 281
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 126/246 (51%), Gaps = 24/246 (9%)
Query: 55 GMLGTAEPPDADSDFVEKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDD 114
G +G+ E P G Y R + +GKG F V A G EVA +KI D
Sbjct: 1 GAMGSDEQPHI----------GNY-RLLKTIGKGNFAKVKLARHILTGREVA---IKIID 46
Query: 115 VLQL-PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK 173
QL P LQKL+ EV ++K L N+VK ++ V + +KT+ +I E + G + Y
Sbjct: 47 KTQLNPTSLQKLFREVRIMKILNHPNIVKLFE--VIETEKTLYLIMEYASGGEVFDYLVA 104
Query: 174 HKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM 233
H + K ++ RQI+ + Y H I+HRDLK +N+ ++ + +KI D G +
Sbjct: 105 HGRMKEKEARSKFRQIVSAVQYCHQKR--IVHRDLKAENLLLDADMN-IKIADFGFSNEF 161
Query: 234 Q-QPTARSVIGTPEFMAPELYE-EEYNE-LVDIYSFGMCILEMVTFEYPYSECKNPAQIF 290
+ G+P + APEL++ ++Y+ VD++S G+ + +V+ P+ + +N ++
Sbjct: 162 TVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELR 220
Query: 291 KKVTSG 296
++V G
Sbjct: 221 ERVLRG 226
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 128/264 (48%), Gaps = 16/264 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G V+K + +G+ +A + ++ P ++ E+ +L +V FY
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIK---PAIRNQIIRELQVLHECNSPYIVGFY 73
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
++ D + ++ M E G+L Q KK + +++ + ++ GL YL + I+
Sbjct: 74 GAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 130
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDI 263
HRD+K NI VN + GE+K+ D G++ + A +GT +M+PE L Y+ DI
Sbjct: 131 HRDVKPSNILVN-SRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDI 189
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFK---KVTSGIKPASLAKVNDPQIKGFIEKCLVP 320
+S G+ ++EM YP + P IF+ + + P + V + + F+ KCL+
Sbjct: 190 WSMGLSLVEMAVGRYP----RPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIK 245
Query: 321 -ASERLSAKDLLKDPFLQVENQKE 343
+ER K L+ F++ + +E
Sbjct: 246 NPAERADLKQLMVHAFIKRSDAEE 269
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 128/259 (49%), Gaps = 16/259 (6%)
Query: 84 VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKF 143
+LGKG+F VY+A G+EVA + + G +Q++ +EV + LK ++++
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMID-KKAMYKAGMVQRVQNEVKIHCQLKHPSILEL 76
Query: 144 YKSWVDDKKKTVNMITELFTSGNLRQYRKKH-KNVDIKVIKNWARQILHGLVYLHSHNPP 202
Y + D V ++ E+ +G + +Y K K +++ QI+ G++YLHSH
Sbjct: 77 YNYFEDS--NYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG-- 132
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR--SVIGTPEFMAPELYEEEYNEL 260
I+HRDL N+ + N +KI D GLA ++ P + ++ GTP +++PE+ + L
Sbjct: 133 ILHRDLTLSNLLLTRN-MNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGL 191
Query: 261 -VDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLV 319
D++S G ++ P+ + K V + + S + + K I + L
Sbjct: 192 ESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSI---EAKDLIHQLLR 248
Query: 320 --PASERLSAKDLLKDPFL 336
PA +RLS +L PF+
Sbjct: 249 RNPA-DRLSLSSVLDHPFM 266
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 134/274 (48%), Gaps = 16/274 (5%)
Query: 73 DPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLL 132
DP + + D + GKG+F VYK D VA +KI D+ + +++ + E+ +L
Sbjct: 16 DPEELFTKLDRI-GKGSFGEVYKGIDNHTKEVVA---IKIIDLEEAEDEIEDIQQEITVL 71
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHG 192
+ +++ S++ K + +I E G+ K ++ I R+IL G
Sbjct: 72 SQCDSPYITRYFGSYLKSTK--LWIIMEYLGGGSALDLLKP-GPLEETYIATILREILKG 128
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAP 250
L YLHS IHRD+K N+ ++ G+VK+ D G+A + Q +GTP +MAP
Sbjct: 129 LDYLHSERK--IHRDIKAANVLLS-EQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAP 185
Query: 251 ELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQ 309
E+ ++ Y+ DI+S G+ +E+ E P S+ +P ++ + P +L +
Sbjct: 186 EVIKQSAYDFKADIWSLGITAIELAKGEPPNSDL-HPMRVLFLIPKN-SPPTLEGQHSKP 243
Query: 310 IKGFIEKCLVPASE-RLSAKDLLKDPFLQVENQK 342
K F+E CL R +AK+LLK F+ +K
Sbjct: 244 FKEFVEACLNKDPRFRPTAKELLKHKFITRYTKK 277
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 119/248 (47%), Gaps = 24/248 (9%)
Query: 69 FVEKDPSG---RYVRYDEVLGKGAFKTV----YKAFDEFAGIEVAWSRVKIDDVLQLPGD 121
F ++DP+ R++++ LGKG F +V Y + G VA +++
Sbjct: 2 FEDRDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEH 57
Query: 122 LQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIK 180
L+ E+ +LKSL+ DN+VK+ ++ + +I E G+LR+Y +KHK +D
Sbjct: 58 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHI 117
Query: 181 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS 240
+ + QI G+ YL + IHRDL NI V N VKIGD GL + Q
Sbjct: 118 KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXX 174
Query: 241 VIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+ P + APE L E +++ D++SFG+ + E+ T+ + K+P F ++
Sbjct: 175 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEFMRMI 231
Query: 295 SGIKPASL 302
K +
Sbjct: 232 GNDKQGQM 239
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 14/208 (6%)
Query: 82 DEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV 141
+E++G G F VY+AF + G EVA + D + ++ + E L LK N++
Sbjct: 12 EEIIGIGGFGKVYRAF--WIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN- 200
V K+ + ++ E G L + K + ++ NWA QI G+ YLH
Sbjct: 70 ALRG--VCLKEPNLCLVMEFARGGPLNRVLSG-KRIPPDILVNWAVQIARGMNYLHDEAI 126
Query: 201 PPIIHRDLKCDNIFV-----NGNHGE--VKIGDLGLAIAMQQPTARSVIGTPEFMAPELY 253
PIIHRDLK NI + NG+ +KI D GLA + T S G +MAPE+
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVI 186
Query: 254 EEE-YNELVDIYSFGMCILEMVTFEYPY 280
+++ D++S+G+ + E++T E P+
Sbjct: 187 RASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 134/258 (51%), Gaps = 26/258 (10%)
Query: 74 PSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ-LPGDLQKLYSEVHLL 132
P G+ + + +G G+F TVYK ++ G +VA VK+ +V P LQ +EV +L
Sbjct: 22 PDGQ-ITVGQRIGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVL 74
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNWARQILH 191
+ + N++ F + ++T+ +L + ++K + + ARQ
Sbjct: 75 RKTRHVNILLFMGY---STAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTAR 131
Query: 192 GLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA----RSVIGTPEF 247
G+ YLH+ + IIHRDLK +NIF++ ++ VKIGD GLA + + + G+ +
Sbjct: 132 GMDYLHAKS--IIHRDLKSNNIFLHEDN-TVKIGDFGLATEKSRWSGSHQFEQLSGSILW 188
Query: 248 MAPELYEEE----YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLA 303
MAPE+ + Y+ D+Y+FG+ + E++T + PYS N QI + V G L+
Sbjct: 189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLS 248
Query: 304 KV--NDP-QIKGFIEKCL 318
KV N P ++K + +CL
Sbjct: 249 KVRSNCPKRMKRLMAECL 266
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 148/283 (52%), Gaps = 22/283 (7%)
Query: 76 GRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQL-PGDLQKLYSEVHLLKS 134
G Y R + +GKG F V A G EVA VKI D QL LQKL+ EV ++K
Sbjct: 14 GNY-RLLKTIGKGNFAKVKLARHILTGKEVA---VKIIDKTQLNSSSLQKLFREVRIMKV 69
Query: 135 LKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLV 194
L N+VK ++ V + +KT+ ++ E + G + Y H + K + RQI+ +
Sbjct: 70 LNHPNIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 127
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ-QPTARSVIGTPEFMAPELY 253
Y H I+HRDLK +N+ ++ + +KI D G + + G+P + APEL+
Sbjct: 128 Y--CHQKFIVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELF 184
Query: 254 E-EEYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIK--PASLAKVNDPQ 309
+ ++Y+ VD++S G+ + +V+ P+ + +N ++ ++V G P ++ +
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENL 243
Query: 310 IKGFIEKCLVPASERLSAKDLLKDPFLQV---ENQKEPICDPL 349
+K F+ ++ S+R + + ++KD ++ V +++ +P +PL
Sbjct: 244 LKKFL---ILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPL 283
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 132/273 (48%), Gaps = 29/273 (10%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG GAF VYKA ++ + A K+ D + +L+ E+ +L S N+VK
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAA---AKVIDT-KSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 145 KSWVDDKKKTVNMITELFTSGN----LRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
++ + + ++ E G + + + I+V+ +Q L L YLH +
Sbjct: 101 DAFY--YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVV---CKQTLDALNYLHDNK 155
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR--SVIGTPEFMAPELYEEE-- 256
IIHRDLK NI + G++K+ D G++ + R IGTP +MAPE+ E
Sbjct: 156 --IIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETS 212
Query: 257 ----YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVN--DPQI 310
Y+ D++S G+ ++EM E P+ E NP ++ K+ +P +LA+ +
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPPHHEL-NPMRVLLKIAKS-EPPTLAQPSRWSSNF 270
Query: 311 KGFIEKCLVP-ASERLSAKDLLKDPFLQVENQK 342
K F++KCL R + LL+ PF+ V++ K
Sbjct: 271 KDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNK 303
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 119/225 (52%), Gaps = 14/225 (6%)
Query: 76 GRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQL-PGDLQKLYSEVHLLKS 134
G Y R + +GKG F V A G EVA +KI D QL P LQKL+ EV ++K
Sbjct: 15 GNY-RLLKTIGKGNFAKVKLARHILTGREVA---IKIIDKTQLNPTSLQKLFREVRIMKI 70
Query: 135 LKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLV 194
L N+VK ++ V + +KT+ +I E + G + Y H + K ++ RQI+ +
Sbjct: 71 LNHPNIVKLFE--VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ 128
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ-QPTARSVIGTPEFMAPELY 253
Y H I+HRDLK +N+ ++ + +KI D G + + G P + APEL+
Sbjct: 129 YCHQKR--IVHRDLKAENLLLDADMN-IKIADFGFSNEFTVGGKLDAFCGAPPYAAPELF 185
Query: 254 E-EEYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ ++Y+ VD++S G+ + +V+ P+ + +N ++ ++V G
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRG 229
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 119/248 (47%), Gaps = 24/248 (9%)
Query: 69 FVEKDPSG---RYVRYDEVLGKGAFKTV----YKAFDEFAGIEVAWSRVKIDDVLQLPGD 121
F ++DP+ R++++ + LGKG F +V Y + G VA +++
Sbjct: 6 FEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEH 61
Query: 122 LQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIK 180
L+ E+ +LKSL+ DN+VK+ ++ + +I E G+LR Y +KHK +D
Sbjct: 62 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 121
Query: 181 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS 240
+ + QI G+ YL + IHRDL NI V N VKIGD GL + Q
Sbjct: 122 KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXX 178
Query: 241 VIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+ P + APE L E +++ D++SFG+ + E+ T+ + K+P F ++
Sbjct: 179 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEFMRMI 235
Query: 295 SGIKPASL 302
K +
Sbjct: 236 GNDKQGQM 243
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 119/248 (47%), Gaps = 24/248 (9%)
Query: 69 FVEKDPSG---RYVRYDEVLGKGAFKTV----YKAFDEFAGIEVAWSRVKIDDVLQLPGD 121
F ++DP+ R++++ + LGKG F +V Y + G VA +++
Sbjct: 4 FEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEH 59
Query: 122 LQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIK 180
L+ E+ +LKSL+ DN+VK+ ++ + +I E G+LR Y +KHK +D
Sbjct: 60 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 119
Query: 181 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS 240
+ + QI G+ YL + IHRDL NI V N VKIGD GL + Q
Sbjct: 120 KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXX 176
Query: 241 VIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+ P + APE L E +++ D++SFG+ + E+ T+ + K+P F ++
Sbjct: 177 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEFMRMI 233
Query: 295 SGIKPASL 302
K +
Sbjct: 234 GNDKQGQM 241
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 119/248 (47%), Gaps = 24/248 (9%)
Query: 69 FVEKDPSG---RYVRYDEVLGKGAFKTV----YKAFDEFAGIEVAWSRVKIDDVLQLPGD 121
F ++DP+ R++++ + LGKG F +V Y + G VA +++
Sbjct: 5 FEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEH 60
Query: 122 LQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIK 180
L+ E+ +LKSL+ DN+VK+ ++ + +I E G+LR Y +KHK +D
Sbjct: 61 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 120
Query: 181 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS 240
+ + QI G+ YL + IHRDL NI V N VKIGD GL + Q
Sbjct: 121 KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXX 177
Query: 241 VIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+ P + APE L E +++ D++SFG+ + E+ T+ + K+P F ++
Sbjct: 178 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEFMRMI 234
Query: 295 SGIKPASL 302
K +
Sbjct: 235 GNDKQGQM 242
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 119/248 (47%), Gaps = 24/248 (9%)
Query: 69 FVEKDPSG---RYVRYDEVLGKGAFKTV----YKAFDEFAGIEVAWSRVKIDDVLQLPGD 121
F ++DP+ R++++ + LGKG F +V Y + G VA +++
Sbjct: 3 FEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEH 58
Query: 122 LQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIK 180
L+ E+ +LKSL+ DN+VK+ ++ + +I E G+LR Y +KHK +D
Sbjct: 59 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 118
Query: 181 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS 240
+ + QI G+ YL + IHRDL NI V N VKIGD GL + Q
Sbjct: 119 KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXX 175
Query: 241 VIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+ P + APE L E +++ D++SFG+ + E+ T+ + K+P F ++
Sbjct: 176 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEFMRMI 232
Query: 295 SGIKPASL 302
K +
Sbjct: 233 GNDKQGQM 240
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 147/283 (51%), Gaps = 22/283 (7%)
Query: 76 GRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQL-PGDLQKLYSEVHLLKS 134
G Y R + +GKG F V A G EVA VKI D QL LQKL+ EV ++K
Sbjct: 14 GNY-RLLKTIGKGNFAKVKLARHILTGKEVA---VKIIDKTQLNSSSLQKLFREVRIMKV 69
Query: 135 LKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLV 194
L N+VK ++ V + +KT+ ++ E + G + Y H + K + RQI+ +
Sbjct: 70 LNHPNIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 127
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ-QPTARSVIGTPEFMAPELY 253
Y H I+HRDLK +N+ ++ + +KI D G + + G P + APEL+
Sbjct: 128 Y--CHQKFIVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDAFCGAPPYAAPELF 184
Query: 254 E-EEYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIK--PASLAKVNDPQ 309
+ ++Y+ VD++S G+ + +V+ P+ + +N ++ ++V G P ++ +
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENL 243
Query: 310 IKGFIEKCLVPASERLSAKDLLKDPFLQV---ENQKEPICDPL 349
+K F+ ++ S+R + + ++KD ++ V +++ +P +PL
Sbjct: 244 LKKFL---ILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPL 283
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 148/283 (52%), Gaps = 22/283 (7%)
Query: 76 GRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQL-PGDLQKLYSEVHLLKS 134
G Y R + +GKG F V A G EVA V+I D QL LQKL+ EV ++K
Sbjct: 14 GNY-RLLKTIGKGNFAKVKLARHILTGKEVA---VRIIDKTQLNSSSLQKLFREVRIMKV 69
Query: 135 LKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLV 194
L N+VK ++ V + +KT+ ++ E + G + Y H + K + RQI+ +
Sbjct: 70 LNHPNIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 127
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ-QPTARSVIGTPEFMAPELY 253
Y H I+HRDLK +N+ ++ + +KI D G + + G+P + APEL+
Sbjct: 128 Y--CHQKFIVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELF 184
Query: 254 E-EEYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIK--PASLAKVNDPQ 309
+ ++Y+ VD++S G+ + +V+ P+ + +N ++ ++V G P ++ +
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENL 243
Query: 310 IKGFIEKCLVPASERLSAKDLLKDPFLQV---ENQKEPICDPL 349
+K F+ ++ S+R + + ++KD ++ V +++ +P +PL
Sbjct: 244 LKKFL---ILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPL 283
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 121/255 (47%), Gaps = 31/255 (12%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G G+F TVYK ++ G +VA +K+ D P Q +EV +L+ + N++ F
Sbjct: 44 IGSGSFGTVYKG--KWHG-DVAVKILKVVD--PTPEQFQAFRNEVAVLRKTRHVNILLFM 98
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
D V E S + + + + + ARQ G+ YLH+ N II
Sbjct: 99 GYMTKDNLAIVTQWCE--GSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN--II 154
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIA---------MQQPTARSVIGTPEFMAPELYEE 255
HRD+K +NIF++ VKIGD GLA ++QPT G+ +MAPE+
Sbjct: 155 HRDMKSNNIFLHEGL-TVKIGDFGLATVKSRWSGSQQVEQPT-----GSVLWMAPEVIRM 208
Query: 256 EYNE----LVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKV--NDPQ 309
+ N D+YS+G+ + E++T E PYS N QI V G L+K+ N P+
Sbjct: 209 QDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPK 268
Query: 310 -IKGFIEKCLVPASE 323
+K + C+ E
Sbjct: 269 AMKRLVADCVKKVKE 283
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 133/281 (47%), Gaps = 35/281 (12%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
EV+G GA V A+ +VA R+ ++ + + +L E+ + N+V
Sbjct: 16 EVIGSGATAVVQAAYCAPKKEKVAIKRINLE---KCQTSMDELLKEIQAMSQCHHPNIVS 72
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRK------KHKN--VDIKVIKNWARQILHGLV 194
+Y S+V K + ++ +L + G++ K +HK+ +D I R++L GL
Sbjct: 73 YYTSFV--VKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 130
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM-------QQPTARSVIGTPEF 247
YLH + IHRD+K NI + G G V+I D G++ + + ++ +GTP +
Sbjct: 131 YLHKNGQ--IHRDVKAGNILL-GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCW 187
Query: 248 MAPELYEE--EYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFK--------KVTSGI 297
MAPE+ E+ Y+ DI+SFG+ +E+ T PY + P ++ + +G+
Sbjct: 188 MAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYP-PMKVLMLTLQNDPPSLETGV 246
Query: 298 KPASLAKVNDPQIKGFIEKCLVPASE-RLSAKDLLKDPFLQ 337
+ + K + I CL E R +A +LL+ F Q
Sbjct: 247 QDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 287
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 129/263 (49%), Gaps = 25/263 (9%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDD 138
+ +EV+G+GAF V KA ++ +VA +++ + + + E+ L +
Sbjct: 11 IEVEEVVGRGAFGVVCKA--KWRAKDVAIKQIESES------ERKAFIVELRQLSRVNHP 62
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK-----NWARQILHGL 193
N+VK Y + ++ V ++ E G+L Y H + +W Q G+
Sbjct: 63 NIVKLYGACLN----PVCLVMEYAEGGSL--YNVLHGAEPLPYYTAAHAMSWCLQCSQGV 116
Query: 194 VYLHSHNP-PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL 252
YLHS P +IHRDLK N+ + +KI D G A +Q + G+ +MAPE+
Sbjct: 117 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK-GSAAWMAPEV 175
Query: 253 YE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPA-QIFKKVTSGIKPASLAKVNDPQI 310
+E Y+E D++S+G+ + E++T P+ E PA +I V +G +P + + P I
Sbjct: 176 FEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKP-I 234
Query: 311 KGFIEKCLVP-ASERLSAKDLLK 332
+ + +C S+R S ++++K
Sbjct: 235 ESLMTRCWSKDPSQRPSMEEIVK 257
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 147/283 (51%), Gaps = 22/283 (7%)
Query: 76 GRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQL-PGDLQKLYSEVHLLKS 134
G Y R + +GKG F V A G EVA VKI D QL LQKL+ EV ++K
Sbjct: 14 GNY-RLLKTIGKGNFAKVKLARHILTGKEVA---VKIIDKTQLNSSSLQKLFREVRIMKV 69
Query: 135 LKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLV 194
L N+VK ++ V + +KT+ ++ E + G + Y H + K + RQI+ +
Sbjct: 70 LNHPNIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 127
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ-QPTARSVIGTPEFMAPELY 253
Y H I+HRDLK +N+ ++ + +KI D G + + G+P + APEL+
Sbjct: 128 Y--CHQKFIVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELF 184
Query: 254 E-EEYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIK--PASLAKVNDPQ 309
+ ++Y+ VD++S G+ + +V+ P+ + +N ++ ++V G P ++ +
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENL 243
Query: 310 IKGFIEKCLVPASERLSAKDLLKDPFLQV---ENQKEPICDPL 349
+K F+ ++ S+R + + ++KD ++ V +++ +P PL
Sbjct: 244 LKKFL---ILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVAPL 283
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 69
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F S +L+++ + + +IK++ Q+L GL + HSH
Sbjct: 70 LLD--VIHTENKLYLVFE-FLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EE 256
++HRDLK +N+ +N G +K+ D GLA A P T + T + APE+ +
Sbjct: 127 --VLHRDLKPENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 184 YSTAVDIWSLGCIFAEMVT 202
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 148/283 (52%), Gaps = 22/283 (7%)
Query: 76 GRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQL-PGDLQKLYSEVHLLKS 134
G Y R + +GKG F V A G EVA VKI D QL LQKL+ EV ++K
Sbjct: 7 GNY-RLLKTIGKGNFAKVKLARHILTGKEVA---VKIIDKTQLNSSSLQKLFREVRIMKV 62
Query: 135 LKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLV 194
L N+VK ++ V + +KT+ ++ E + G + Y H + K + RQI+ +
Sbjct: 63 LNHPNIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQ 120
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR-SVIGTPEFMAPELY 253
Y H I+HRDLK +N+ ++ + +KI D G + + G+P + APEL+
Sbjct: 121 Y--CHQKFIVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELF 177
Query: 254 E-EEYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIK--PASLAKVNDPQ 309
+ ++Y+ VD++S G+ + +V+ P+ + +N ++ ++V G P ++ +
Sbjct: 178 QGKKYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENL 236
Query: 310 IKGFIEKCLVPASERLSAKDLLKDPFLQV---ENQKEPICDPL 349
+K F+ ++ S+R + + ++KD ++ V +++ +P +PL
Sbjct: 237 LKKFL---ILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPL 276
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 129/263 (49%), Gaps = 25/263 (9%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDD 138
+ +EV+G+GAF V KA ++ +VA +++ + + + E+ L +
Sbjct: 10 IEVEEVVGRGAFGVVCKA--KWRAKDVAIKQIESES------ERKAFIVELRQLSRVNHP 61
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK-----NWARQILHGL 193
N+VK Y + ++ V ++ E G+L Y H + +W Q G+
Sbjct: 62 NIVKLYGACLN----PVCLVMEYAEGGSL--YNVLHGAEPLPYYTAAHAMSWCLQCSQGV 115
Query: 194 VYLHSHNP-PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL 252
YLHS P +IHRDLK N+ + +KI D G A +Q + G+ +MAPE+
Sbjct: 116 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK-GSAAWMAPEV 174
Query: 253 YE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPA-QIFKKVTSGIKPASLAKVNDPQI 310
+E Y+E D++S+G+ + E++T P+ E PA +I V +G +P + + P I
Sbjct: 175 FEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKP-I 233
Query: 311 KGFIEKCLVP-ASERLSAKDLLK 332
+ + +C S+R S ++++K
Sbjct: 234 ESLMTRCWSKDPSQRPSMEEIVK 256
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 147/283 (51%), Gaps = 22/283 (7%)
Query: 76 GRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQL-PGDLQKLYSEVHLLKS 134
G Y R + +GKG F V A G EVA V+I D QL LQKL+ EV ++K
Sbjct: 14 GNY-RLLKTIGKGNFAKVKLARHILTGKEVA---VRIIDKTQLNSSSLQKLFREVRIMKV 69
Query: 135 LKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLV 194
L N+VK ++ V + +KT+ ++ E + G + Y H + K + RQI+ +
Sbjct: 70 LNHPNIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 127
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ-QPTARSVIGTPEFMAPELY 253
Y H I+HRDLK +N+ ++ + +KI D G + G+P + APEL+
Sbjct: 128 Y--CHQKFIVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDEFCGSPPYAAPELF 184
Query: 254 E-EEYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIK--PASLAKVNDPQ 309
+ ++Y+ VD++S G+ + +V+ P+ + +N ++ ++V G P ++ +
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYMSTDCENL 243
Query: 310 IKGFIEKCLVPASERLSAKDLLKDPFLQV---ENQKEPICDPL 349
+K F+ ++ S+R + + ++KD ++ V +++ +P +PL
Sbjct: 244 LKKFL---ILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPL 283
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 133/278 (47%), Gaps = 19/278 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F ++ D EV ++ +L P +K+ E+ + +SL +VV F+
Sbjct: 23 LGKGGFAKCFEISDADTK-EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D+ V ++ EL +L + K+ K + + + RQI+ G YLH + +I
Sbjct: 82 GFFEDND--FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR--VI 137
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS--VIGTPEFMAPELYEEEYNEL-V 261
HRDLK N+F+N + EVKIGD GLA ++ R + GTP ++APE+ ++ + V
Sbjct: 138 HRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 196
Query: 262 DIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL-VP 320
D++S G CI+ + P E + + ++ S+ K +P I+K L
Sbjct: 197 DVWSIG-CIMYTLLVGKPPFETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQTD 253
Query: 321 ASERLSAKDLLKDPFLQVENQKEPICDPLKLPIQSLKM 358
+ R + +LL D F P +LPI L +
Sbjct: 254 PTARPTINELLNDEFFTSGYI------PARLPITCLTI 285
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 67
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F S +L+++ + + +IK++ Q+L GL + HSH
Sbjct: 68 LLD--VIHTENKLYLVFE-FLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EE 256
++HRDLK +N+ +N G +K+ D GLA A P T + T + APE+ +
Sbjct: 125 --VLHRDLKPENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 182 YSTAVDIWSLGCIFAEMVT 200
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 135/266 (50%), Gaps = 23/266 (8%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPG-DLQKLYSEVHLLKSLKDDNVV 141
E LGKGAF V + AG E A KI + +L D QKL E + + LK N+V
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYA---AKIINTKKLSARDHQKLEREARICRLLKHPNIV 84
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQ---YRKKHKNVDIKVIKNWARQILHGLVYLHS 198
+ + S ++ +I +L T G L + R+ + D + +QIL + LH
Sbjct: 85 RLHDSISEEGHHY--LIFDLVTGGELFEDIVAREYYSEADAS---HCIQQILEAV--LHC 137
Query: 199 HNPPIIHRDLKCDNIFVNG--NHGEVKIGDLGLAIAM--QQPTARSVIGTPEFMAPE-LY 253
H ++HRDLK +N+ + VK+ D GLAI + +Q GTP +++PE L
Sbjct: 138 HQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLR 197
Query: 254 EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIK--PASLAKVNDPQIK 311
++ Y + VD+++ G+ IL ++ YP ++ ++++++ +G P+ P+ K
Sbjct: 198 KDPYGKPVDLWACGV-ILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 256
Query: 312 GFIEKCL-VPASERLSAKDLLKDPFL 336
I K L + S+R++A + LK P++
Sbjct: 257 DLINKMLTINPSKRITAAEALKHPWI 282
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 32/261 (12%)
Query: 74 PSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ-LPGDLQKLYSEVHLL 132
P G+ + + +G G+F TVYK ++ G +VA VK+ +V P LQ +EV +L
Sbjct: 11 PDGQ-ITVGQRIGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH----KNVDIKVIKNWARQ 188
+ + N++ F K + ++T+ +L Y H K IK+I + ARQ
Sbjct: 64 RKTRHVNILLFMGY---STKPQLAIVTQWCEGSSL--YHHLHIIETKFEMIKLI-DIARQ 117
Query: 189 ILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA----RSVIGT 244
G+ YLH+ + IIHRDLK +NIF++ + VKIGD GLA + + + G+
Sbjct: 118 TAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGS 174
Query: 245 PEFMAPELYEEE----YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPA 300
+MAPE+ + Y+ D+Y+FG+ + E++T + PYS N QI V G
Sbjct: 175 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 234
Query: 301 SLAKV--NDPQ-IKGFIEKCL 318
L+KV N P+ +K + +CL
Sbjct: 235 DLSKVRSNCPKAMKRLMAECL 255
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 32/261 (12%)
Query: 74 PSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ-LPGDLQKLYSEVHLL 132
P G+ + + +G G+F TVYK ++ G +VA VK+ +V P LQ +EV +L
Sbjct: 33 PDGQ-ITVGQRIGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVL 85
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH----KNVDIKVIKNWARQ 188
+ + N++ F K + ++T+ +L Y H K IK+I + ARQ
Sbjct: 86 RKTRHVNILLFMGY---STKPQLAIVTQWCEGSSL--YHHLHIIETKFEMIKLI-DIARQ 139
Query: 189 ILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA----RSVIGT 244
G+ YLH+ + IIHRDLK +NIF++ + VKIGD GLA + + + G+
Sbjct: 140 TAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGS 196
Query: 245 PEFMAPELYEEE----YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPA 300
+MAPE+ + Y+ D+Y+FG+ + E++T + PYS N QI V G
Sbjct: 197 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 256
Query: 301 SLAKV--NDPQ-IKGFIEKCL 318
L+KV N P+ +K + +CL
Sbjct: 257 DLSKVRSNCPKAMKRLMAECL 277
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 118/246 (47%), Gaps = 24/246 (9%)
Query: 71 EKDPSG---RYVRYDEVLGKGAFKTV----YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQ 123
++DP+ R++++ + LGKG F +V Y + G VA +++ L+
Sbjct: 4 DRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLR 59
Query: 124 KLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVI 182
E+ +LKSL+ DN+VK+ ++ + +I E G+LR Y +KHK +D +
Sbjct: 60 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 119
Query: 183 KNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVI 242
+ QI G+ YL + IHRDL NI V N VKIGD GL + Q +
Sbjct: 120 LQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKV 176
Query: 243 GTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
P + APE L E +++ D++SFG+ + E+ T+ + K+P F ++
Sbjct: 177 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEFMRMIGN 233
Query: 297 IKPASL 302
K +
Sbjct: 234 DKQGQM 239
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 32/261 (12%)
Query: 74 PSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ-LPGDLQKLYSEVHLL 132
P G+ + + +G G+F TVYK ++ G +VA VK+ +V P LQ +EV +L
Sbjct: 34 PDGQ-ITVGQRIGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVL 86
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH----KNVDIKVIKNWARQ 188
+ + N++ F K + ++T+ +L Y H K IK+I + ARQ
Sbjct: 87 RKTRHVNILLFMGY---STKPQLAIVTQWCEGSSL--YHHLHIIETKFEMIKLI-DIARQ 140
Query: 189 ILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA----RSVIGT 244
G+ YLH+ + IIHRDLK +NIF++ + VKIGD GLA + + + G+
Sbjct: 141 TAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGS 197
Query: 245 PEFMAPELYEEE----YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPA 300
+MAPE+ + Y+ D+Y+FG+ + E++T + PYS N QI V G
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 257
Query: 301 SLAKV--NDPQ-IKGFIEKCL 318
L+KV N P+ +K + +CL
Sbjct: 258 DLSKVRSNCPKAMKRLMAECL 278
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 32/261 (12%)
Query: 74 PSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ-LPGDLQKLYSEVHLL 132
P G+ + + +G G+F TVYK ++ G +VA VK+ +V P LQ +EV +L
Sbjct: 8 PDGQ-ITVGQRIGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVL 60
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH----KNVDIKVIKNWARQ 188
+ + N++ F K + ++T+ +L Y H K IK+I + ARQ
Sbjct: 61 RKTRHVNILLFMGY---STKPQLAIVTQWCEGSSL--YHHLHIIETKFEMIKLI-DIARQ 114
Query: 189 ILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA----RSVIGT 244
G+ YLH+ + IIHRDLK +NIF++ + VKIGD GLA + + + G+
Sbjct: 115 TAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGS 171
Query: 245 PEFMAPELYEEE----YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPA 300
+MAPE+ + Y+ D+Y+FG+ + E++T + PYS N QI V G
Sbjct: 172 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 231
Query: 301 SLAKV--NDPQ-IKGFIEKCL 318
L+KV N P+ +K + +CL
Sbjct: 232 DLSKVRSNCPKAMKRLMAECL 252
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 32/261 (12%)
Query: 74 PSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ-LPGDLQKLYSEVHLL 132
P G+ + + +G G+F TVYK ++ G +VA VK+ +V P LQ +EV +L
Sbjct: 11 PDGQ-ITVGQRIGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH----KNVDIKVIKNWARQ 188
+ + N++ F K + ++T+ +L Y H K IK+I + ARQ
Sbjct: 64 RKTRHVNILLFMGY---STKPQLAIVTQWCEGSSL--YHHLHIIETKFEMIKLI-DIARQ 117
Query: 189 ILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA----RSVIGT 244
G+ YLH+ + IIHRDLK +NIF++ + VKIGD GLA + + + G+
Sbjct: 118 TAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGS 174
Query: 245 PEFMAPELYEEE----YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPA 300
+MAPE+ + Y+ D+Y+FG+ + E++T + PYS N QI V G
Sbjct: 175 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 234
Query: 301 SLAKV--NDPQ-IKGFIEKCL 318
L+KV N P+ +K + +CL
Sbjct: 235 DLSKVRSNCPKAMKRLMAECL 255
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 32/261 (12%)
Query: 74 PSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ-LPGDLQKLYSEVHLL 132
P G+ + + +G G+F TVYK ++ G +VA VK+ +V P LQ +EV +L
Sbjct: 6 PDGQ-ITVGQRIGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVL 58
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH----KNVDIKVIKNWARQ 188
+ + N++ F K + ++T+ +L Y H K IK+I + ARQ
Sbjct: 59 RKTRHVNILLFMGY---STKPQLAIVTQWCEGSSL--YHHLHIIETKFEMIKLI-DIARQ 112
Query: 189 ILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA----RSVIGT 244
G+ YLH+ + IIHRDLK +NIF++ + VKIGD GLA + + + G+
Sbjct: 113 TAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGS 169
Query: 245 PEFMAPELYEEE----YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPA 300
+MAPE+ + Y+ D+Y+FG+ + E++T + PYS N QI V G
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 229
Query: 301 SLAKV--NDPQ-IKGFIEKCL 318
L+KV N P+ +K + +CL
Sbjct: 230 DLSKVRSNCPKAMKRLMAECL 250
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 117/245 (47%), Gaps = 24/245 (9%)
Query: 72 KDPSG---RYVRYDEVLGKGAFKTV----YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQK 124
+DP+ R++++ + LGKG F +V Y + G VA +++ L+
Sbjct: 2 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRD 57
Query: 125 LYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIK 183
E+ +LKSL+ DN+VK+ ++ + +I E G+LR Y +KHK +D +
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 117
Query: 184 NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIG 243
+ QI G+ YL + IHRDL NI V N VKIGD GL + Q +
Sbjct: 118 QYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVK 174
Query: 244 TPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGI 297
P + APE L E +++ D++SFG+ + E+ T+ + K+P F ++
Sbjct: 175 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEFMRMIGND 231
Query: 298 KPASL 302
K +
Sbjct: 232 KQGQM 236
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 69
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F S +L+ + + + +IK++ Q+L GL + HSH
Sbjct: 70 LLD--VIHTENKLYLVFE-FLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EE 256
++HRDLK N+ +N G +K+ D GLA A P T + T + APE+ +
Sbjct: 127 --VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 184 YSTAVDIWSLGCIFAEMVT 202
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 32/261 (12%)
Query: 74 PSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ-LPGDLQKLYSEVHLL 132
P G+ + + +G G+F TVYK ++ G +VA VK+ +V P LQ +EV +L
Sbjct: 34 PDGQ-ITVGQRIGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVL 86
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH----KNVDIKVIKNWARQ 188
+ + N++ F K + ++T+ +L Y H K IK+I + ARQ
Sbjct: 87 RKTRHVNILLFMGY---STKPQLAIVTQWCEGSSL--YHHLHIIETKFEMIKLI-DIARQ 140
Query: 189 ILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA----RSVIGT 244
G+ YLH+ + IIHRDLK +NIF++ + VKIGD GLA + + + G+
Sbjct: 141 TAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGS 197
Query: 245 PEFMAPELYEEE----YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPA 300
+MAPE+ + Y+ D+Y+FG+ + E++T + PYS N QI V G
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 257
Query: 301 SLAKV--NDPQ-IKGFIEKCL 318
L+KV N P+ +K + +CL
Sbjct: 258 DLSKVRSNCPKAMKRLMAECL 278
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 84 VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKF 143
+G G++ K + G + W + + + + Q L SEV+LL+ LK N+V++
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE--AEKQMLVSEVNLLRELKHPNIVRY 70
Query: 144 YKSWVDDKKKTVNMITELFTSGNLRQY----RKKHKNVDIKVIKNWARQILHGLVYLHSH 199
Y +D T+ ++ E G+L K+ + +D + + Q+ L H
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 200 N---PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT--ARSVIGTPEFMAPE-LY 253
+ ++HRDLK N+F++G VK+GD GLA + T A++ +GTP +M+PE +
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQN-VKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMN 189
Query: 254 EEEYNELVDIYSFGMCILEMVTFEYPYS 281
YNE DI+S G + E+ P++
Sbjct: 190 RMSYNEKSDIWSLGCLLYELCALMPPFT 217
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 117/245 (47%), Gaps = 24/245 (9%)
Query: 72 KDPSG---RYVRYDEVLGKGAFKTV----YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQK 124
+DP+ R++++ + LGKG F +V Y + G VA +++ L+
Sbjct: 1 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRD 56
Query: 125 LYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIK 183
E+ +LKSL+ DN+VK+ ++ + +I E G+LR Y +KHK +D +
Sbjct: 57 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 116
Query: 184 NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIG 243
+ QI G+ YL + IHRDL NI V N VKIGD GL + Q +
Sbjct: 117 QYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVK 173
Query: 244 TPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGI 297
P + APE L E +++ D++SFG+ + E+ T+ + K+P F ++
Sbjct: 174 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEFMRMIGND 230
Query: 298 KPASL 302
K +
Sbjct: 231 KQGQM 235
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 32/261 (12%)
Query: 74 PSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ-LPGDLQKLYSEVHLL 132
P G+ + + +G G+F TVYK ++ G +VA VK+ +V P LQ +EV +L
Sbjct: 26 PDGQ-ITVGQRIGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVL 78
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH----KNVDIKVIKNWARQ 188
+ + N++ F K + ++T+ +L Y H K IK+I + ARQ
Sbjct: 79 RKTRHVNILLFMGY---STKPQLAIVTQWCEGSSL--YHHLHIIETKFEMIKLI-DIARQ 132
Query: 189 ILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA----RSVIGT 244
G+ YLH+ + IIHRDLK +NIF++ + VKIGD GLA + + + G+
Sbjct: 133 TAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGS 189
Query: 245 PEFMAPELYEEE----YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPA 300
+MAPE+ + Y+ D+Y+FG+ + E++T + PYS N QI V G
Sbjct: 190 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 249
Query: 301 SLAKV--NDPQ-IKGFIEKCL 318
L+KV N P+ +K + +CL
Sbjct: 250 DLSKVRSNCPKAMKRLMAECL 270
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 84 VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKF 143
+G G++ K + G + W + + + + Q L SEV+LL+ LK N+V++
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE--AEKQMLVSEVNLLRELKHPNIVRY 70
Query: 144 YKSWVDDKKKTVNMITELFTSGNL----RQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
Y +D T+ ++ E G+L + K+ + +D + + Q+ L H
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 200 N---PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT--ARSVIGTPEFMAPE-LY 253
+ ++HRDLK N+F++G VK+GD GLA + T A++ +GTP +M+PE +
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQN-VKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMN 189
Query: 254 EEEYNELVDIYSFGMCILEMVTFEYPYS 281
YNE DI+S G + E+ P++
Sbjct: 190 RMSYNEKSDIWSLGCLLYELCALMPPFT 217
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 73
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F +L+++ + + +IK++ Q+L GL + HSH
Sbjct: 74 LLD--VIHTENKLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 130
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPE--LYEEE 256
++HRDLK N+ +N G +K+ D GLA A P T + T + APE L +
Sbjct: 131 --VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKY 187
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 188 YSTAVDIWSLGCIFAEMVT 206
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 113/237 (47%), Gaps = 21/237 (8%)
Query: 77 RYVRYDEVLGKGAFKTV----YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLL 132
R++++ + LGKG F +V Y + G VA +++ L+ E+ +L
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRDFEREIEIL 65
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILH 191
KSL+ DN+VK+ ++ + +I E G+LR Y +KHK +D + + QI
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 192 GLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE----- 246
G+ YL + IHRDL NI V N VKIGD GL + Q + P
Sbjct: 126 GMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 182
Query: 247 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASL 302
+ APE L E +++ D++SFG+ + E+ T+ + K+P F ++ K +
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEFMRMIGNDKQGQM 236
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 32/261 (12%)
Query: 74 PSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ-LPGDLQKLYSEVHLL 132
P G+ + + +G G+F TVYK ++ G +VA VK+ +V P LQ +EV +L
Sbjct: 6 PDGQ-ITVGQRIGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVL 58
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH----KNVDIKVIKNWARQ 188
+ + N++ F K + ++T+ +L Y H K IK+I + ARQ
Sbjct: 59 RKTRHVNILLFMGY---STKPQLAIVTQWCEGSSL--YHHLHIIETKFEMIKLI-DIARQ 112
Query: 189 ILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA----RSVIGT 244
G+ YLH+ + IIHRDLK +NIF++ + VKIGD GLA + + + G+
Sbjct: 113 TAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGS 169
Query: 245 PEFMAPELYEEE----YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPA 300
+MAPE+ + Y+ D+Y+FG+ + E++T + PYS N QI V G
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 229
Query: 301 SLAKV--NDPQ-IKGFIEKCL 318
L+KV N P+ +K + +CL
Sbjct: 230 DLSKVRSNCPKAMKRLMAECL 250
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 113/237 (47%), Gaps = 21/237 (8%)
Query: 77 RYVRYDEVLGKGAFKTV----YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLL 132
R++++ + LGKG F +V Y + G VA +++ L+ E+ +L
Sbjct: 8 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST----EEHLRDFEREIEIL 63
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILH 191
KSL+ DN+VK+ ++ + +I E G+LR Y +KHK +D + + QI
Sbjct: 64 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 123
Query: 192 GLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE----- 246
G+ YL + IHRDL NI V N VKIGD GL + Q + P
Sbjct: 124 GMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 180
Query: 247 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASL 302
+ APE L E +++ D++SFG+ + E+ T+ + K+P F ++ K +
Sbjct: 181 WYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEFMRMIGNDKQGQM 234
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 108/219 (49%), Gaps = 11/219 (5%)
Query: 67 SDFVEKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLY 126
S + K + RY D+ LG G TVY A D I+VA + I + L++
Sbjct: 2 SHMIGKIINERYKIVDK-LGGGGMSTVYLAEDTILNIKVAIKAIFIPP-REKEETLKRFE 59
Query: 127 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 186
EVH L N+V VD++ ++ E L +Y + H + + N+
Sbjct: 60 REVHNSSQLSHQNIVSMID--VDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFT 117
Query: 187 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT---ARSVIG 243
QIL G+ H+H+ I+HRD+K NI ++ N +KI D G+A A+ + + V+G
Sbjct: 118 NQILDGI--KHAHDMRIVHRDIKPQNILIDSNKT-LKIFDFGIAKALSETSLTQTNHVLG 174
Query: 244 TPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYS 281
T ++ +PE + E +E DIYS G+ + EM+ E P++
Sbjct: 175 TVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 68
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F S +L+ + + + +IK++ Q+L GL + HSH
Sbjct: 69 LLD--VIHTENKLYLVFE-FLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EE 256
++HRDLK N+ +N G +K+ D GLA A P T + T + APE+ +
Sbjct: 126 --VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 183 YSTAVDIWSLGCIFAEMVT 201
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 113/237 (47%), Gaps = 21/237 (8%)
Query: 77 RYVRYDEVLGKGAFKTV----YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLL 132
R++++ + LGKG F +V Y + G VA +++ L+ E+ +L
Sbjct: 28 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST----EEHLRDFEREIEIL 83
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILH 191
KSL+ DN+VK+ ++ + +I E G+LR Y +KHK +D + + QI
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 192 GLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE----- 246
G+ YL + IHRDL NI V N VKIGD GL + Q + P
Sbjct: 144 GMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 200
Query: 247 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASL 302
+ APE L E +++ D++SFG+ + E+ T+ + K+P F ++ K +
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEFMRMIGNDKQGQM 254
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 68
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F +L+++ + + +IK++ Q+L GL + HSH
Sbjct: 69 LLD--VIHTENKLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EE 256
++HRDLK +N+ +N G +K+ D GLA A P T + T + APE+ +
Sbjct: 126 --VLHRDLKPENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 183 YSTAVDIWSLGCIFAEMVT 201
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 67
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F +L+++ + + +IK++ Q+L GL + HSH
Sbjct: 68 LLD--VIHTENKLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EE 256
++HRDLK +N+ +N G +K+ D GLA A P T + T + APE+ +
Sbjct: 125 --VLHRDLKPENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 182 YSTAVDIWSLGCIFAEMVT 200
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 66
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F +L+++ + + +IK++ Q+L GL + HSH
Sbjct: 67 LLD--VIHTENKLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPE--LYEEE 256
++HRDLK N+ +N G +K+ D GLA A P T + T + APE L +
Sbjct: 124 --VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKY 180
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 181 YSTAVDIWSLGCIFAEMVT 199
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 113/237 (47%), Gaps = 21/237 (8%)
Query: 77 RYVRYDEVLGKGAFKTV----YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLL 132
R++++ + LGKG F +V Y + G VA +++ L+ E+ +L
Sbjct: 28 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST----EEHLRDFEREIEIL 83
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILH 191
KSL+ DN+VK+ ++ + +I E G+LR Y +KHK +D + + QI
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 192 GLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE----- 246
G+ YL + IHRDL NI V N VKIGD GL + Q + P
Sbjct: 144 GMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 200
Query: 247 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASL 302
+ APE L E +++ D++SFG+ + E+ T+ + K+P F ++ K +
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEFMRMIGNDKQGQM 254
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 135/265 (50%), Gaps = 22/265 (8%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPG-DLQKLYSEVHLLKSLKDDNVV 141
E LGKGAF V + + G+E A KI + +L D QKL E + + L+ N+V
Sbjct: 35 EELGKGAFSVVRRCVHKTTGLEFA---AKIINTKKLSARDFQKLEREARICRKLQHPNIV 91
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQ---YRKKHKNVDIKVIKNWARQILHGLVYLHS 198
+ + S ++ ++ +L T G L + R+ + D + +QIL + Y HS
Sbjct: 92 RLHDSIQEESFHY--LVFDLVTGGELFEDIVAREFYSEAD---ASHCIQQILESIAYCHS 146
Query: 199 HNPPIIHRDLKCDNIFV--NGNHGEVKIGDLGLAIAMQQPTA-RSVIGTPEFMAPELYEE 255
+ I+HR+LK +N+ + VK+ D GLAI + A GTP +++PE+ ++
Sbjct: 147 NG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK 204
Query: 256 E-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGI--KPASLAKVNDPQIKG 312
+ Y++ VDI++ G+ IL ++ YP ++ +++ ++ +G P+ P+ K
Sbjct: 205 DPYSKPVDIWACGV-ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKS 263
Query: 313 FIEKCL-VPASERLSAKDLLKDPFL 336
I+ L V +R++A LK P++
Sbjct: 264 LIDSMLTVNPKKRITADQALKVPWI 288
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 69
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F +L+++ + + +IK++ Q+L GL + HSH
Sbjct: 70 LLD--VIHTENKLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EE 256
++HRDLK N+ +N G +K+ D GLA A P T + T + APE+ +
Sbjct: 127 --VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 184 YSTAVDIWSLGCIFAEMVT 202
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 73
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F +L+++ + + +IK++ Q+L GL + HSH
Sbjct: 74 LLD--VIHTENKLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 130
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EE 256
++HRDLK N+ +N G +K+ D GLA A P T + T + APE+ +
Sbjct: 131 --VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 187
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 188 YSTAVDIWSLGCIFAEMVT 206
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 69
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F +L+++ + + +IK++ Q+L GL + HSH
Sbjct: 70 LLD--VIHTENKLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EE 256
++HRDLK N+ +N G +K+ D GLA A P T + T + APE+ +
Sbjct: 127 --VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 184 YSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 68
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F +L+++ + + +IK++ Q+L GL + HSH
Sbjct: 69 LLD--VIHTENKLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EE 256
++HRDLK N+ +N G +K+ D GLA A P T + T + APE+ +
Sbjct: 126 --VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 183 YSTAVDIWSLGCIFAEMVT 201
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 70
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F +L+++ + + +IK++ Q+L GL + HSH
Sbjct: 71 LLD--VIHTENKLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 127
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EE 256
++HRDLK N+ +N G +K+ D GLA A P T + T + APE+ +
Sbjct: 128 --VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 184
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 185 YSTAVDIWSLGCIFAEMVT 203
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 67
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F +L+++ + + +IK++ Q+L GL + HSH
Sbjct: 68 LLD--VIHTENKLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EE 256
++HRDLK N+ +N G +K+ D GLA A P T + T + APE+ +
Sbjct: 125 --VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 181
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 182 YSTAVDIWSLGCIFAEMVT 200
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 66
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F +L+++ + + +IK++ Q+L GL + HSH
Sbjct: 67 LLD--VIHTENKLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EE 256
++HRDLK N+ +N G +K+ D GLA A P T + T + APE+ +
Sbjct: 124 --VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 181 YSTAVDIWSLGCIFAEMVT 199
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 68
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F +L+++ + + +IK++ Q+L GL + HSH
Sbjct: 69 LLD--VIHTENKLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EE 256
++HRDLK N+ +N G +K+ D GLA A P T + T + APE+ +
Sbjct: 126 --VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 183 YSTAVDIWSLGCIFAEMVT 201
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 66
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F +L+++ + + +IK++ Q+L GL + HSH
Sbjct: 67 LLD--VIHTENKLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EE 256
++HRDLK N+ +N G +K+ D GLA A P T + T + APE+ +
Sbjct: 124 --VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 181 YSTAVDIWSLGCIFAEMVT 199
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 135/265 (50%), Gaps = 22/265 (8%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPG-DLQKLYSEVHLLKSLKDDNVV 141
E LGKGAF V + + G+E A KI + +L D QKL E + + L+ N+V
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFA---AKIINTKKLSARDFQKLEREARICRKLQHPNIV 68
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQ---YRKKHKNVDIKVIKNWARQILHGLVYLHS 198
+ + S ++ ++ +L T G L + R+ + D + +QIL + Y HS
Sbjct: 69 RLHDSIQEESFHY--LVFDLVTGGELFEDIVAREFYSEAD---ASHCIQQILESIAYCHS 123
Query: 199 HNPPIIHRDLKCDNIFV--NGNHGEVKIGDLGLAIAMQQPTA-RSVIGTPEFMAPELYEE 255
+ I+HR+LK +N+ + VK+ D GLAI + A GTP +++PE+ ++
Sbjct: 124 NG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK 181
Query: 256 E-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGI--KPASLAKVNDPQIKG 312
+ Y++ VDI++ G+ IL ++ YP ++ +++ ++ +G P+ P+ K
Sbjct: 182 DPYSKPVDIWACGV-ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKS 240
Query: 313 FIEKCL-VPASERLSAKDLLKDPFL 336
I+ L V +R++A LK P++
Sbjct: 241 LIDSMLTVNPKKRITADQALKVPWI 265
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 66
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F +L+++ + + +IK++ Q+L GL + HSH
Sbjct: 67 LLD--VIHTENKLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EE 256
++HRDLK N+ +N G +K+ D GLA A P T + T + APE+ +
Sbjct: 124 --VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 181 YSTAVDIWSLGCIFAEMVT 199
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 66
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F +L+++ + + +IK++ Q+L GL + HSH
Sbjct: 67 LLD--VIHTENKLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EE 256
++HRDLK N+ +N G +K+ D GLA A P T + T + APE+ +
Sbjct: 124 --VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 181 YSTAVDIWSLGCIFAEMVT 199
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 118/248 (47%), Gaps = 24/248 (9%)
Query: 69 FVEKDPSG---RYVRYDEVLGKGAFKTV----YKAFDEFAGIEVAWSRVKIDDVLQLPGD 121
F ++DP+ R++++ + LGKG F +V Y + G VA +++
Sbjct: 2 FEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEH 57
Query: 122 LQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH-KNVDIK 180
L+ E+ +LKSL+ DN+VK+ ++ + +I E G+LR Y + H + +D
Sbjct: 58 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHI 117
Query: 181 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS 240
+ + QI G+ YL + IHRDL NI V N VKIGD GL + Q
Sbjct: 118 KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXX 174
Query: 241 VIGTPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+ P + APE L E +++ D++SFG+ + E+ T+ + K+P F ++
Sbjct: 175 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEFMRMI 231
Query: 295 SGIKPASL 302
K +
Sbjct: 232 GNDKQGQM 239
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 65
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F +L+++ + + +IK++ Q+L GL + HSH
Sbjct: 66 LLD--VIHTENKLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EE 256
++HRDLK N+ +N G +K+ D GLA A P T + T + APE+ +
Sbjct: 123 --VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 180 YSTAVDIWSLGCIFAEMVT 198
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 65
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F +L+++ + + +IK++ Q+L GL + HSH
Sbjct: 66 LLD--VIHTENKLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EE 256
++HRDLK N+ +N G +K+ D GLA A P T + T + APE+ +
Sbjct: 123 --VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 180 YSTAVDIWSLGCIFAEMVT 198
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 67
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F +L+++ + + +IK++ Q+L GL + HSH
Sbjct: 68 LLD--VIHTENKLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EE 256
++HRDLK N+ +N G +K+ D GLA A P T + T + APE+ +
Sbjct: 125 --VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 182 YSTAVDIWSLGCIFAEMVT 200
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 66
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F +L+ + + + +IK++ Q+L GL + HSH
Sbjct: 67 LLD--VIHTENKLYLVFE-FLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EE 256
++HRDLK +N+ +N G +K+ D GLA A P T + T + APE+ +
Sbjct: 124 --VLHRDLKPENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 181 YSTAVDIWSLGCIFAEMVT 199
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 66
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F +L+++ + + +IK++ Q+L GL + HSH
Sbjct: 67 LLD--VIHTENKLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EE 256
++HRDLK N+ +N G +K+ D GLA A P T + T + APE+ +
Sbjct: 124 --VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 181 YSTAVDIWSLGCIFAEMVT 199
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 20/221 (9%)
Query: 70 VEKDPS---GRYVRYDEVLGKGAFKTV----YKAFDEFAGIEVAWSRVKIDDVLQLPGDL 122
E DP+ R+++ LG+G F V Y + G +VA +K + DL
Sbjct: 11 TEVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADL 70
Query: 123 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKN-VDIKV 181
+K E+ +L++L +N+VK+ +D + +I E SG+L++Y K+KN +++K
Sbjct: 71 KK---EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQ 127
Query: 182 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPT 237
+A QI G+ YL S +HRDL N+ V H +VKIGD GL A+ + T
Sbjct: 128 QLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEH-QVKIGDFGLTKAIETDKEXXT 184
Query: 238 ARSVIGTPEF-MAPE-LYEEEYNELVDIYSFGMCILEMVTF 276
+ +P F APE L + ++ D++SFG+ + E++T+
Sbjct: 185 VKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTY 225
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 65
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F +L+++ + + +IK++ Q+L GL + HSH
Sbjct: 66 LLD--VIHTENKLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EE 256
++HRDLK N+ +N G +K+ D GLA A P T + T + APE+ +
Sbjct: 123 --VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 179
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 180 YSTAVDIWSLGCIFAEMVT 198
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 70
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F +L+++ + + +IK++ Q+L GL + HSH
Sbjct: 71 LLD--VIHTENKLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 127
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EE 256
++HRDLK N+ +N G +K+ D GLA A P T + T + APE+ +
Sbjct: 128 --VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 184
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 185 YSTAVDIWSLGCIFAEMVT 203
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 135/265 (50%), Gaps = 22/265 (8%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPG-DLQKLYSEVHLLKSLKDDNVV 141
E LGKGAF V + + G+E A KI + +L D QKL E + + L+ N+V
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFA---AKIINTKKLSARDFQKLEREARICRKLQHPNIV 68
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQ---YRKKHKNVDIKVIKNWARQILHGLVYLHS 198
+ + S ++ ++ +L T G L + R+ + D + +QIL + Y HS
Sbjct: 69 RLHDSIQEESFHY--LVFDLVTGGELFEDIVAREFYSEAD---ASHCIQQILESIAYCHS 123
Query: 199 HNPPIIHRDLKCDNIFV--NGNHGEVKIGDLGLAIAMQQPTA-RSVIGTPEFMAPELYEE 255
+ I+HR+LK +N+ + VK+ D GLAI + A GTP +++PE+ ++
Sbjct: 124 NG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK 181
Query: 256 E-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGI--KPASLAKVNDPQIKG 312
+ Y++ VDI++ G+ IL ++ YP ++ +++ ++ +G P+ P+ K
Sbjct: 182 DPYSKPVDIWACGV-ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKS 240
Query: 313 FIEKCL-VPASERLSAKDLLKDPFL 336
I+ L V +R++A LK P++
Sbjct: 241 LIDSMLTVNPKKRITADQALKVPWI 265
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 65
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F +L+++ + + +IK++ Q+L GL + HSH
Sbjct: 66 LLD--VIHTENKLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EE 256
++HRDLK N+ +N G +K+ D GLA A P T + T + APE+ +
Sbjct: 123 --VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 179
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 180 YSTAVDIWSLGCIFAEMVT 198
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 135/265 (50%), Gaps = 22/265 (8%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPG-DLQKLYSEVHLLKSLKDDNVV 141
E LGKGAF V + + G+E A KI + +L D QKL E + + L+ N+V
Sbjct: 11 EELGKGAFSVVRRCVHKTTGLEFA---AKIINTKKLSARDFQKLEREARICRKLQHPNIV 67
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQ---YRKKHKNVDIKVIKNWARQILHGLVYLHS 198
+ + S ++ ++ +L T G L + R+ + D + +QIL + Y HS
Sbjct: 68 RLHDSIQEESFHY--LVFDLVTGGELFEDIVAREFYSEAD---ASHCIQQILESIAYCHS 122
Query: 199 HNPPIIHRDLKCDNIFV--NGNHGEVKIGDLGLAIAMQQPTA-RSVIGTPEFMAPELYEE 255
+ I+HR+LK +N+ + VK+ D GLAI + A GTP +++PE+ ++
Sbjct: 123 NG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK 180
Query: 256 E-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGI--KPASLAKVNDPQIKG 312
+ Y++ VDI++ G+ IL ++ YP ++ +++ ++ +G P+ P+ K
Sbjct: 181 DPYSKPVDIWACGV-ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKS 239
Query: 313 FIEKCL-VPASERLSAKDLLKDPFL 336
I+ L V +R++A LK P++
Sbjct: 240 LIDSMLTVNPKKRITADQALKVPWI 264
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 67
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F +L+++ + + +IK++ Q+L GL + HSH
Sbjct: 68 LLD--VIHTENKLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EE 256
++HRDLK N+ +N G +K+ D GLA A P T + T + APE+ +
Sbjct: 125 --VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 182 YSTAVDIWSLGCIFAEMVT 200
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 66
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F +L+++ + + +IK++ Q+L GL + HSH
Sbjct: 67 LLD--VIHTENKLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EE 256
++HRDLK N+ +N G +K+ D GLA A P T + T + APE+ +
Sbjct: 124 --VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 181 YSTAVDIWSLGCIFAEMVT 199
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 66
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F +L+++ + + +IK++ Q+L GL + HSH
Sbjct: 67 LLD--VIHTENKLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EE 256
++HRDLK N+ +N G +K+ D GLA A P T + T + APE+ +
Sbjct: 124 --VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 181 YSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 65
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F +L+++ + + +IK++ Q+L GL + HSH
Sbjct: 66 LLD--VIHTENKLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EE 256
++HRDLK N+ +N G +K+ D GLA A P T + T + APE+ +
Sbjct: 123 --VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 180 YSTAVDIWSLGCIFAEMVT 198
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 134/261 (51%), Gaps = 32/261 (12%)
Query: 74 PSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ-LPGDLQKLYSEVHLL 132
P G+ + + +G G+F TVYK ++ G +VA VK+ +V P LQ +EV +L
Sbjct: 6 PDGQ-ITVGQRIGSGSFGTVYKG--KWHG-DVA---VKMLNVTAPTPQQLQAFKNEVGVL 58
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH----KNVDIKVIKNWARQ 188
+ + N++ F + ++T+ +L Y H K IK+I + ARQ
Sbjct: 59 RKTRHVNILLFMGY---STAPQLAIVTQWCEGSSL--YHHLHIIETKFEMIKLI-DIARQ 112
Query: 189 ILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA----RSVIGT 244
G+ YLH+ + IIHRDLK +NIF++ + VKIGD GLA + + + G+
Sbjct: 113 TAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGS 169
Query: 245 PEFMAPELYEEE----YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPA 300
+MAPE+ + Y+ D+Y+FG+ + E++T + PYS N QI V G
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 229
Query: 301 SLAKV--NDPQ-IKGFIEKCL 318
L+KV N P+ +K + +CL
Sbjct: 230 DLSKVRSNCPKAMKRLMAECL 250
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 101/199 (50%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 69
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F +L+ + + + +IK++ Q+L GL + HSH
Sbjct: 70 LLD--VIHTENKLYLVFE-FLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EE 256
++HRDLK N+ +N G +K+ D GLA A P T + T + APE+ +
Sbjct: 127 --VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 184 YSTAVDIWSLGCIFAEMVT 202
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 135/277 (48%), Gaps = 31/277 (11%)
Query: 83 EVLGK-GAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV 141
E++G+ G F VYKA ++ + A K+ D + +L+ E+ +L S N+V
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAA---AKVIDT-KSEEELEDYMVEIDILASCDHPNIV 70
Query: 142 KFYKSWVDDKKKTVNMITELFTSGN----LRQYRKKHKNVDIKVIKNWARQILHGLVYLH 197
K ++ + + ++ E G + + + I+V+ +Q L L YLH
Sbjct: 71 KLLDAFY--YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVV---CKQTLDALNYLH 125
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR---SVIGTPEFMAPELYE 254
+ IIHRDLK NI + G++K+ D G++ + + S IGTP +MAPE+
Sbjct: 126 DNK--IIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVM 182
Query: 255 EE------YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVN-- 306
E Y+ D++S G+ ++EM E P+ E NP ++ K+ +P +LA+ +
Sbjct: 183 CETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL-NPMRVLLKIAKS-EPPTLAQPSRW 240
Query: 307 DPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQVENQK 342
K F++KCL R + LL+ PF+ V++ K
Sbjct: 241 SSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNK 277
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 134/266 (50%), Gaps = 23/266 (8%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPG-DLQKLYSEVHLLKSLKDDNVV 141
E +GKGAF V + G E A KI + +L D QKL E + + LK N+V
Sbjct: 10 EDIGKGAFSVVRRCVKLCTGHEYA---AKIINTKKLSARDHQKLEREARICRLLKHSNIV 66
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQ---YRKKHKNVDIKVIKNWARQILHGLVYLHS 198
+ + S ++ ++ +L T G L + R+ + D + +QIL + LH
Sbjct: 67 RLHDSISEEGFHY--LVFDLVTGGELFEDIVAREYYSEADAS---HCIQQILEAV--LHC 119
Query: 199 HNPPIIHRDLKCDNIFVNG--NHGEVKIGDLGLAIAMQ--QPTARSVIGTPEFMAPE-LY 253
H ++HRDLK +N+ + VK+ D GLAI +Q Q GTP +++PE L
Sbjct: 120 HQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 254 EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIK--PASLAKVNDPQIK 311
+E Y + VDI++ G+ IL ++ YP ++ ++++++ +G P+ P+ K
Sbjct: 180 KEAYGKPVDIWACGV-ILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAK 238
Query: 312 GFIEKCL-VPASERLSAKDLLKDPFL 336
I + L + ++R++A + LK P++
Sbjct: 239 NLINQMLTINPAKRITAHEALKHPWV 264
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 113/237 (47%), Gaps = 21/237 (8%)
Query: 77 RYVRYDEVLGKGAFKTV----YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLL 132
R++++ + LGKG F +V Y + G VA +++ L+ E+ +L
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRDFEREIEIL 65
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILH 191
KSL+ DN+VK+ ++ + +I E G+LR Y +KHK +D + + QI
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 192 GLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE----- 246
G+ YL + IHRDL NI V N VKIGD GL + Q + P
Sbjct: 126 GMEYLGTKR--YIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIF 182
Query: 247 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASL 302
+ APE L E +++ D++SFG+ + E+ T+ + K+P F ++ K +
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEFMRMIGNDKQGQM 236
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 134/309 (43%), Gaps = 49/309 (15%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G GA+ V A G +VA KI + + + ++ E+ +LK K DN++
Sbjct: 61 ETIGNGAYGVVSSARRRLTGQQVAIK--KIPNAFDVVTNAKRTLRELKILKHFKHDNIIA 118
Query: 143 ----FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 198
+ + K+V ++ +L S +L Q + + ++ ++ + Q+L GL Y+HS
Sbjct: 119 IKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHS 177
Query: 199 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM------QQPTARSVIGTPEFMAPEL 252
+IHRDLK N+ VN N E+KIGD G+A + Q + T + APEL
Sbjct: 178 AQ--VIHRDLKPSNLLVNEN-CELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 234
Query: 253 Y--EEEYNELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDP 308
EY + +D++S G EM+ +P + Q+ V PA + V
Sbjct: 235 MLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAE 294
Query: 309 QIKGFIE----------KCLVPA-----------------SERLSAKDLLKDPFLQVENQ 341
+++ +I+ + + P S R+SA L+ PFL +
Sbjct: 295 RVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHD 354
Query: 342 K--EPICDP 348
EP C P
Sbjct: 355 PDDEPDCAP 363
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 66
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHN 200
V + + ++ E F +L+++ + + +IK++ Q+L GL + HSH
Sbjct: 67 LLD--VIHTENKLYLVFE-FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHR 123
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE--EE 256
++HRDLK N+ +N G +K+ D GLA A P T + T + APE+ +
Sbjct: 124 --VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 257 YNELVDIYSFGMCILEMVT 275
Y+ VDI+S G EMVT
Sbjct: 181 YSTAVDIWSLGCIFAEMVT 199
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 111/211 (52%), Gaps = 17/211 (8%)
Query: 77 RYVRYDEVLGKGAFKTV----YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLL 132
R+++ LG+G F V Y + G +VA +K + DL+K E+ +L
Sbjct: 9 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKK---EIEIL 65
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKN-VDIKVIKNWARQILH 191
++L +N+VK+ +D + +I E SG+L++Y K+KN +++K +A QI
Sbjct: 66 RNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICK 125
Query: 192 GLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEF 247
G+ YL S +HRDL N+ V H +VKIGD GL A+ + T + +P F
Sbjct: 126 GMDYLGSRQ--YVHRDLAARNVLVESEH-QVKIGDFGLTKAIETDKEXXTVKDDRDSPVF 182
Query: 248 -MAPE-LYEEEYNELVDIYSFGMCILEMVTF 276
APE L + ++ D++SFG+ + E++T+
Sbjct: 183 WYAPECLMQSKFYIASDVWSFGVTLHELLTY 213
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 101/201 (50%), Gaps = 18/201 (8%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 69
Query: 143 FYKSWVDDKKKTVNMITELF--TSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHS 198
D T N + +F +L+++ + + +IK++ Q+L GL + HS
Sbjct: 70 LL-----DVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 199 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE-- 254
H ++HRDLK N+ +N G +K+ D GLA A P T + T + APE+
Sbjct: 125 HR--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 255 EEYNELVDIYSFGMCILEMVT 275
+ Y+ VDI+S G EMVT
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVT 202
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 117/245 (47%), Gaps = 24/245 (9%)
Query: 72 KDPSG---RYVRYDEVLGKGAFKTV----YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQK 124
+DP+ R++++ + LGKG F +V Y + G VA +++ L+
Sbjct: 3 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST----EEHLRD 58
Query: 125 LYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIK 183
E+ +LKSL+ DN+VK+ ++ + +I E G+LR Y +KHK +D +
Sbjct: 59 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 118
Query: 184 NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIG 243
+ QI G+ YL + IHR+L NI V N VKIGD GL + Q +
Sbjct: 119 QYTSQICKGMEYLGTKR--YIHRNLATRNILVE-NENRVKIGDFGLTKVLPQDKEYYKVK 175
Query: 244 TPE-----FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGI 297
P + APE L E +++ D++SFG+ + E+ T+ + K+P F ++
Sbjct: 176 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEFMRMIGND 232
Query: 298 KPASL 302
K +
Sbjct: 233 KQGQM 237
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 134/309 (43%), Gaps = 49/309 (15%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G GA+ V A G +VA KI + + + ++ E+ +LK K DN++
Sbjct: 60 ETIGNGAYGVVSSARRRLTGQQVAIK--KIPNAFDVVTNAKRTLRELKILKHFKHDNIIA 117
Query: 143 ----FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 198
+ + K+V ++ +L S +L Q + + ++ ++ + Q+L GL Y+HS
Sbjct: 118 IKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHS 176
Query: 199 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM------QQPTARSVIGTPEFMAPEL 252
+IHRDLK N+ VN N E+KIGD G+A + Q + T + APEL
Sbjct: 177 AQ--VIHRDLKPSNLLVNEN-CELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 233
Query: 253 Y--EEEYNELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDP 308
EY + +D++S G EM+ +P + Q+ V PA + V
Sbjct: 234 MLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAE 293
Query: 309 QIKGFIE----------KCLVPA-----------------SERLSAKDLLKDPFLQVENQ 341
+++ +I+ + + P S R+SA L+ PFL +
Sbjct: 294 RVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHD 353
Query: 342 K--EPICDP 348
EP C P
Sbjct: 354 PDDEPDCAP 362
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 128/270 (47%), Gaps = 23/270 (8%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPG-DLQKLYSEVHLLKSLKDDNVV 141
EV+GKG F V + + G + A V + PG + L E + LK ++V
Sbjct: 32 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 91
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDI----KVIKNWARQILHGLVYLH 197
+ +++ D + M+ E +L K + V ++ RQIL L Y H
Sbjct: 92 ELLETYSSDG--MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 149
Query: 198 SHNPPIIHRDLK--CDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELY 253
+N IIHRD+K C + N VK+G G+AI + + A +GTP FMAPE+
Sbjct: 150 DNN--IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 207
Query: 254 EEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG---IKPASLAKVNDPQ 309
+ E Y + VD++ G+ + +++ P+ K ++F+ + G + P + +++
Sbjct: 208 KREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RLFEGIIKGKYKMNPRQWSHISE-S 264
Query: 310 IKGFIEKCLV--PASERLSAKDLLKDPFLQ 337
K + + L+ PA ER++ + L P+L+
Sbjct: 265 AKDLVRRMLMLDPA-ERITVYEALNHPWLK 293
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 134/266 (50%), Gaps = 23/266 (8%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPG-DLQKLYSEVHLLKSLKDDNVV 141
E LGKGAF V + AG E A I + +L D QKL E + + LK N+V
Sbjct: 17 EELGKGAFSVVRRCVKVLAGQEYA---AMIINTKKLSARDHQKLEREARICRLLKHPNIV 73
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQ---YRKKHKNVDIKVIKNWARQILHGLVYLHS 198
+ + S ++ +I +L T G L + R+ + D + +QIL + LH
Sbjct: 74 RLHDSISEEGHHY--LIFDLVTGGELFEDIVAREYYSEADAS---HCIQQILEAV--LHC 126
Query: 199 HNPPIIHRDLKCDNIFVNG--NHGEVKIGDLGLAIAM--QQPTARSVIGTPEFMAPE-LY 253
H ++HR+LK +N+ + VK+ D GLAI + +Q GTP +++PE L
Sbjct: 127 HQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLR 186
Query: 254 EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIK--PASLAKVNDPQIK 311
++ Y + VD+++ G+ IL ++ YP ++ ++++++ +G P+ P+ K
Sbjct: 187 KDPYGKPVDLWACGV-ILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 245
Query: 312 GFIEKCL-VPASERLSAKDLLKDPFL 336
I K L + S+R++A + LK P++
Sbjct: 246 DLINKMLTINPSKRITAAEALKHPWI 271
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 141/283 (49%), Gaps = 22/283 (7%)
Query: 76 GRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQL-PGDLQKLYSEVHLLKS 134
G Y R + +GKG F V A G EVA VKI D QL LQKL+ EV + K
Sbjct: 14 GNY-RLLKTIGKGNFAKVKLARHILTGKEVA---VKIIDKTQLNSSSLQKLFREVRIXKV 69
Query: 135 LKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLV 194
L N+VK ++ V + +KT+ ++ E + G + Y H K + RQI+ +
Sbjct: 70 LNHPNIVKLFE--VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQ 127
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ-QPTARSVIGTPEFMAPELY 253
Y H I+HRDLK +N+ ++ + +KI D G + + G P + APEL+
Sbjct: 128 Y--CHQKFIVHRDLKAENLLLDADXN-IKIADFGFSNEFTFGNKLDAFCGAPPYAAPELF 184
Query: 254 E-EEYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQ-- 309
+ ++Y+ VD++S G+ + +V+ P+ + +N ++ ++V G D +
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRIPFYXSTDCENL 243
Query: 310 IKGFIEKCLVPASERLSAKDLLKDPFLQV---ENQKEPICDPL 349
+K F+ ++ S+R + + + KD + V +++ +P +PL
Sbjct: 244 LKKFL---ILNPSKRGTLEQIXKDRWXNVGHEDDELKPYVEPL 283
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 98/213 (46%), Gaps = 29/213 (13%)
Query: 81 YDEVLGKGAFKTVYKAFDEFAG-IEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDN 139
+ EVLGKG F K G + V ++ D+ Q + EV +++ L+ N
Sbjct: 14 HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQ-----RTFLKEVKVMRCLEHPN 68
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH-KNVDIKVIKNWARQILHGLVYLHS 198
V+KF DK+ +N ITE G LR K ++A+ I G+ YLHS
Sbjct: 69 VLKFIGVLYKDKR--LNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS 126
Query: 199 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTA------------RSVI 242
N IIHRDL N V N V + D GLA M QP +V+
Sbjct: 127 MN--IIHRDLNSHNCLVRENK-NVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVV 183
Query: 243 GTPEFMAPELYE-EEYNELVDIYSFGMCILEMV 274
G P +MAPE+ Y+E VD++SFG+ + E++
Sbjct: 184 GNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 8/196 (4%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G V+K + +G+ +A + ++ P ++ E+ +L +V FY
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIK---PAIRNQIIRELQVLHECNSPYIVGFY 132
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
++ D + ++ M E G+L Q KK + +++ + ++ GL YL + I+
Sbjct: 133 GAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 189
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDI 263
HRD+K NI VN + GE+K+ D G++ + A S +GT +M+PE L Y+ DI
Sbjct: 190 HRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 248
Query: 264 YSFGMCILEMVTFEYP 279
+S G+ ++EM YP
Sbjct: 249 WSMGLSLVEMAVGRYP 264
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 13/208 (6%)
Query: 84 VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKF 143
+G G++ K + G + W + + + + Q L SEV+LL+ LK N+V++
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE--AEKQMLVSEVNLLRELKHPNIVRY 70
Query: 144 YKSWVDDKKKTVNMITELFTSGNL----RQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
Y +D T+ ++ E G+L + K+ + +D + + Q+ L H
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 200 N---PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT--ARSVIGTPEFMAPE-LY 253
+ ++HRDLK N+F++G VK+GD GLA + A+ +GTP +M+PE +
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQN-VKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMN 189
Query: 254 EEEYNELVDIYSFGMCILEMVTFEYPYS 281
YNE DI+S G + E+ P++
Sbjct: 190 RMSYNEKSDIWSLGCLLYELCALMPPFT 217
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 124/268 (46%), Gaps = 19/268 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPG-DLQKLYSEVHLLKSLKDDNVV 141
EV+GKG F V + + G + A V + PG + L E + LK ++V
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDI----KVIKNWARQILHGLVYLH 197
+ +++ D + M+ E +L K + V ++ RQIL L Y H
Sbjct: 90 ELLETYSSDG--MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 198 SHNPPIIHRDLK--CDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELY 253
+N IIHRD+K C + N VK+G G+AI + + A +GTP FMAPE+
Sbjct: 148 DNN--IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 254 EEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG---IKPASLAKVNDPQ 309
+ E Y + VD++ G+ + +++ P+ K ++F+ + G + P + +++
Sbjct: 206 KREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RLFEGIIKGKYKMNPRQWSHISESA 263
Query: 310 IKGFIEKCLVPASERLSAKDLLKDPFLQ 337
++ +ER++ + L P+L+
Sbjct: 264 KDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA ++ G VA ++++D + G E+ LLK L N+VK
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVK 65
Query: 143 FYKSWVDDKKKTVNMITELF--TSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHS 198
D T N + +F +L+ + + + +IK++ Q+L GL + HS
Sbjct: 66 LL-----DVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 199 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE-- 254
H ++HRDLK N+ +N G +K+ D GLA A P T + T + APE+
Sbjct: 121 HR--VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 255 EEYNELVDIYSFGMCILEMVT 275
+ Y+ VDI+S G EMVT
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVT 198
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 8/196 (4%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G V+K + +G+ +A + ++ P ++ E+ +L +V FY
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE---IKPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
++ D + ++ M E G+L Q KK + +++ + ++ GL YL + I+
Sbjct: 71 GAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 127
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDI 263
HRD+K NI VN + GE+K+ D G++ + A S +GT +M+PE L Y+ DI
Sbjct: 128 HRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 186
Query: 264 YSFGMCILEMVTFEYP 279
+S G+ ++EM YP
Sbjct: 187 WSMGLSLVEMAVGRYP 202
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 8/196 (4%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G V+K + +G+ +A + ++ P ++ E+ +L +V FY
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE---IKPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
++ D + ++ M E G+L Q KK + +++ + ++ GL YL + I+
Sbjct: 71 GAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 127
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDI 263
HRD+K NI VN + GE+K+ D G++ + A S +GT +M+PE L Y+ DI
Sbjct: 128 HRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 186
Query: 264 YSFGMCILEMVTFEYP 279
+S G+ ++EM YP
Sbjct: 187 WSMGLSLVEMAVGRYP 202
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 8/196 (4%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G V+K + +G+ +A + ++ P ++ E+ +L +V FY
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE---IKPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
++ D + ++ M E G+L Q KK + +++ + ++ GL YL + I+
Sbjct: 71 GAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 127
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDI 263
HRD+K NI VN + GE+K+ D G++ + A S +GT +M+PE L Y+ DI
Sbjct: 128 HRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 186
Query: 264 YSFGMCILEMVTFEYP 279
+S G+ ++EM YP
Sbjct: 187 WSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 8/196 (4%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G V+K + +G+ +A + ++ P ++ E+ +L +V FY
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE---IKPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
++ D + ++ M E G+L Q KK + +++ + ++ GL YL + I+
Sbjct: 71 GAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 127
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDI 263
HRD+K NI VN + GE+K+ D G++ + A S +GT +M+PE L Y+ DI
Sbjct: 128 HRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 186
Query: 264 YSFGMCILEMVTFEYP 279
+S G+ ++EM YP
Sbjct: 187 WSMGLSLVEMAVGRYP 202
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 8/196 (4%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G V+K + +G+ +A + ++ P ++ E+ +L +V FY
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIK---PAIRNQIIRELQVLHECNSPYIVGFY 97
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
++ D + ++ M E G+L Q KK + +++ + ++ GL YL + I+
Sbjct: 98 GAFYSDGEISICM--EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IM 154
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDI 263
HRD+K NI VN + GE+K+ D G++ + A S +GT +M+PE L Y+ DI
Sbjct: 155 HRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 213
Query: 264 YSFGMCILEMVTFEYP 279
+S G+ ++EM YP
Sbjct: 214 WSMGLSLVEMAVGRYP 229
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 108/202 (53%), Gaps = 13/202 (6%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + TV+KA + VA RV++DD + G E+ LLK LK N+V+
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE--GVPSSALREICLLKELKHKNIVR 65
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKK-HKNVDIKVIKNWARQILHGLVYLHSHNP 201
+ DKK T ++ E F +L++Y + ++D +++K++ Q+L GL + HS N
Sbjct: 66 LHDVLHSDKKLT--LVFE-FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN- 121
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA--RSVIGTPEFMAPELY--EEEY 257
++HRDLK N+ +N N GE+K+ D GLA A P + + T + P++ + Y
Sbjct: 122 -VLHRDLKPQNLLINRN-GELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 179
Query: 258 NELVDIYSFGMCILEMVTFEYP 279
+ +D++S G E+ P
Sbjct: 180 STSIDMWSAGCIFAELANAARP 201
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 8/196 (4%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G V K +G+ +A + ++ P ++ E+ +L +V FY
Sbjct: 24 LGAGNGGVVTKVQHRPSGLIMARKLIHLEIK---PAIRNQIIRELQVLHECNSPYIVGFY 80
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
++ D + ++ M E G+L Q K+ K + +++ + +L GL YL + I+
Sbjct: 81 GAFYSDGEISICM--EHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQ-IM 137
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDI 263
HRD+K NI VN + GE+K+ D G++ + A S +GT +MAPE L Y+ DI
Sbjct: 138 HRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDI 196
Query: 264 YSFGMCILEMVTFEYP 279
+S G+ ++E+ YP
Sbjct: 197 WSMGLSLVELAVGRYP 212
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 134/266 (50%), Gaps = 23/266 (8%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPG-DLQKLYSEVHLLKSLKDDNVV 141
E LGKGAF V + + E A KI + +L D QKL E + + LK N+V
Sbjct: 37 EELGKGAFSVVRRCVKKTPTQEYA---AKIINTKKLSARDHQKLEREARICRLLKHPNIV 93
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQ---YRKKHKNVDIKVIKNWARQILHGLVYLHS 198
+ + S ++ ++ +L T G L + R+ + D + QIL + ++H
Sbjct: 94 RLHDSISEEGFHY--LVFDLVTGGELFEDIVAREYYSEADAS---HCIHQILESVNHIHQ 148
Query: 199 HNPPIIHRDLKCDNIFVNG--NHGEVKIGDLGLAIAMQ--QPTARSVIGTPEFMAPE-LY 253
H+ I+HRDLK +N+ + VK+ D GLAI +Q Q GTP +++PE L
Sbjct: 149 HD--IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLR 206
Query: 254 EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIK--PASLAKVNDPQIK 311
++ Y + VDI++ G+ IL ++ YP ++ ++++++ +G P+ P+ K
Sbjct: 207 KDPYGKPVDIWACGV-ILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAK 265
Query: 312 GFIEKCL-VPASERLSAKDLLKDPFL 336
I + L + ++R++A LK P++
Sbjct: 266 NLINQMLTINPAKRITADQALKHPWV 291
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 96/180 (53%), Gaps = 10/180 (5%)
Query: 128 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIK--VIKNW 185
EV +L ++K N+V++ +S+ ++ ++ ++ + G+L + K V + I +W
Sbjct: 73 EVAVLANMKHPNIVQYRESF--EENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW 130
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT--ARSVIG 243
QI L H H+ I+HRD+K NIF+ + G V++GD G+A + AR+ IG
Sbjct: 131 FVQIC--LALKHVHDRKILHRDIKSQNIFLTKD-GTVQLGDFGIARVLNSTVELARACIG 187
Query: 244 TPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASL 302
TP +++PE+ E + YN DI++ G + E+ T ++ + + K ++ P SL
Sbjct: 188 TPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSL 247
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 100/206 (48%), Gaps = 15/206 (7%)
Query: 80 RYDEV--LGKGAFKTVYKAFDEFAGIEVAWSRVKIDD----VLQLPGDLQKLYSEVHLLK 133
RY+ V +G GA+ TVYKA D +G VA V++ + LP + + + L+
Sbjct: 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLE 69
Query: 134 SLKDDNVVKFYKSWVDDKKKTVNMITELF--TSGNLRQYRKKH--KNVDIKVIKNWARQI 189
+ + NVV+ + +T +F +LR Y K + + IK+ RQ
Sbjct: 70 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 129
Query: 190 LHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-IAMQQPTARSVIGTPEFM 248
L GL +LH++ I+HRDLK +NI V G VK+ D GLA I Q V+ T +
Sbjct: 130 LRGLDFLHANC--IVHRDLKPENILVTSG-GTVKLADFGLARIYSYQMALTPVVVTLWYR 186
Query: 249 APE-LYEEEYNELVDIYSFGMCILEM 273
APE L + Y VD++S G EM
Sbjct: 187 APEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 108/202 (53%), Gaps = 13/202 (6%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + TV+KA + VA RV++DD + G E+ LLK LK N+V+
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE--GVPSSALREICLLKELKHKNIVR 65
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKK-HKNVDIKVIKNWARQILHGLVYLHSHNP 201
+ DKK T ++ E F +L++Y + ++D +++K++ Q+L GL + HS N
Sbjct: 66 LHDVLHSDKKLT--LVFE-FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN- 121
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA--RSVIGTPEFMAPELY--EEEY 257
++HRDLK N+ +N N GE+K+ + GLA A P + + T + P++ + Y
Sbjct: 122 -VLHRDLKPQNLLINRN-GELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 179
Query: 258 NELVDIYSFGMCILEMVTFEYP 279
+ +D++S G E+ P
Sbjct: 180 STSIDMWSAGCIFAELANAGRP 201
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 101/203 (49%), Gaps = 12/203 (5%)
Query: 80 RYDEV--LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ-LPGDLQKLYSEVHLLKSLK 136
RY+ V +G GA+ TVYKA D +G VA V++ + + LP + + + L++ +
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELF--TSGNLRQYRKKH--KNVDIKVIKNWARQILHG 192
NVV+ + +T +F +LR Y K + + IK+ RQ L G
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-IAMQQPTARSVIGTPEFMAPE 251
L +LH++ I+HRDLK +NI V G VK+ D GLA I Q V+ T + APE
Sbjct: 125 LDFLHANC--IVHRDLKPENILVTSG-GTVKLADFGLARIYSYQMALAPVVVTLWYRAPE 181
Query: 252 -LYEEEYNELVDIYSFGMCILEM 273
L + Y VD++S G EM
Sbjct: 182 VLLQSTYATPVDMWSVGCIFAEM 204
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 127/266 (47%), Gaps = 27/266 (10%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG GAF VYKA ++ G A + K+ + + +L+ E+ +L + +VK
Sbjct: 27 LGDGAFGKVYKAKNKETG---ALAAAKVIET-KSEEELEDYIVEIEILATCDHPYIVKLL 82
Query: 145 KSWVDDKKKTVNMITELFTSGN----LRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
++ D K + ++ E G + + + I+V+ RQ+L L +LHS
Sbjct: 83 GAYYHDGK--LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVV---CRQMLEALNFLHSKR 137
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR--SVIGTPEFMAPELYEEE-- 256
IIHRDLK N+ + G++++ D G++ + + S IGTP +MAPE+ E
Sbjct: 138 --IIHRDLKAGNVLMTLE-GDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETM 194
Query: 257 ----YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVN-DPQIK 311
Y+ DI+S G+ ++EM E P+ E NP ++ K+ P L + +
Sbjct: 195 KDTPYDYKADIWSLGITLIEMAQIEPPHHEL-NPMRVLLKIAKSDPPTLLTPSKWSVEFR 253
Query: 312 GFIEKCLVPASE-RLSAKDLLKDPFL 336
F++ L E R SA LL+ PF+
Sbjct: 254 DFLKIALDKNPETRPSAAQLLEHPFV 279
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 127/266 (47%), Gaps = 27/266 (10%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG GAF VYKA ++ G A + K+ + + +L+ E+ +L + +VK
Sbjct: 19 LGDGAFGKVYKAKNKETG---ALAAAKVIET-KSEEELEDYIVEIEILATCDHPYIVKLL 74
Query: 145 KSWVDDKKKTVNMITELFTSGN----LRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
++ D K + ++ E G + + + I+V+ RQ+L L +LHS
Sbjct: 75 GAYYHDGK--LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVV---CRQMLEALNFLHSKR 129
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR--SVIGTPEFMAPELYEEE-- 256
IIHRDLK N+ + G++++ D G++ + + S IGTP +MAPE+ E
Sbjct: 130 --IIHRDLKAGNVLMTLE-GDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETM 186
Query: 257 ----YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVN-DPQIK 311
Y+ DI+S G+ ++EM E P+ E NP ++ K+ P L + +
Sbjct: 187 KDTPYDYKADIWSLGITLIEMAQIEPPHHEL-NPMRVLLKIAKSDPPTLLTPSKWSVEFR 245
Query: 312 GFIEKCLVPASE-RLSAKDLLKDPFL 336
F++ L E R SA LL+ PF+
Sbjct: 246 DFLKIALDKNPETRPSAAQLLEHPFV 271
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 133/266 (50%), Gaps = 23/266 (8%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPG-DLQKLYSEVHLLKSLKDDNVV 141
E LGKGAF V + G E A KI + +L D QKL E + + LK N+V
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYA---AKIINTKKLSARDHQKLEREARICRLLKHPNIV 66
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQ---YRKKHKNVDIKVIKNWARQILHGLVYLHS 198
+ + S ++ ++ +L T G L + R+ + D + +QIL + H
Sbjct: 67 RLHDSISEEGFHY--LVFDLVTGGELFEDIVAREYYSEADAS---HCIQQILESVN--HC 119
Query: 199 HNPPIIHRDLKCDNIFV--NGNHGEVKIGDLGLAIAMQ--QPTARSVIGTPEFMAPE-LY 253
H I+HRDLK +N+ + VK+ D GLAI +Q Q GTP +++PE L
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 254 EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIK--PASLAKVNDPQIK 311
++ Y + VD+++ G+ IL ++ YP ++ ++++++ +G P+ P+ K
Sbjct: 180 KDPYGKPVDMWACGV-ILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 238
Query: 312 GFIEKCL-VPASERLSAKDLLKDPFL 336
I K L + ++R++A + LK P++
Sbjct: 239 DLINKMLTINPAKRITASEALKHPWI 264
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 131/262 (50%), Gaps = 16/262 (6%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQ-KLYSEVHLLKSLKDDNVV 141
+ LG+G+F V A+ G +VA I+ + D+Q ++ E+ L+ L+ +++
Sbjct: 14 KTLGEGSFGKVKLAYHTTTGQKVALK--IINKKVLAKSDMQGRIEREISYLRLLRHPHII 71
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
K Y V K + M+ E + L Y + + + + + +QI+ + Y H H
Sbjct: 72 KLYD--VIKSKDEIIMVIE-YAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK- 127
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT-ARSVIGTPEFMAPELYEEEY--N 258
I+HRDLK +N+ ++ H VKI D GL+ M ++ G+P + APE+ +
Sbjct: 128 -IVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 185
Query: 259 ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL 318
VD++S G+ + M+ P+ + P +FK +++G+ +L K P G I++ L
Sbjct: 186 PEVDVWSCGVILYVMLCRRLPFDDESIPV-LFKNISNGV--YTLPKFLSPGAAGLIKRML 242
Query: 319 -VPASERLSAKDLLKDPFLQVE 339
V R+S ++++D + +V+
Sbjct: 243 IVNPLNRISIHEIMQDDWFKVD 264
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 101/203 (49%), Gaps = 12/203 (5%)
Query: 80 RYDEV--LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ-LPGDLQKLYSEVHLLKSLK 136
RY+ V +G GA+ TVYKA D +G VA V++ + + LP + + + L++ +
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELF--TSGNLRQYRKKH--KNVDIKVIKNWARQILHG 192
NVV+ + +T +F +LR Y K + + IK+ RQ L G
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-IAMQQPTARSVIGTPEFMAPE 251
L +LH++ I+HRDLK +NI V G VK+ D GLA I Q V+ T + APE
Sbjct: 125 LDFLHANC--IVHRDLKPENILVTSG-GTVKLADFGLARIYSYQMALDPVVVTLWYRAPE 181
Query: 252 -LYEEEYNELVDIYSFGMCILEM 273
L + Y VD++S G EM
Sbjct: 182 VLLQSTYATPVDMWSVGCIFAEM 204
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 133/266 (50%), Gaps = 23/266 (8%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPG-DLQKLYSEVHLLKSLKDDNVV 141
E LGKGAF V + G E A KI + +L D QKL E + + LK N+V
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYA---AKIINTKKLSARDHQKLEREARICRLLKHPNIV 66
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQ---YRKKHKNVDIKVIKNWARQILHGLVYLHS 198
+ + S ++ ++ +L T G L + R+ + D + +QIL + H
Sbjct: 67 RLHDSISEEGFHY--LVFDLVTGGELFEDIVAREYYSEADAS---HCIQQILESVN--HC 119
Query: 199 HNPPIIHRDLKCDNIFV--NGNHGEVKIGDLGLAIAMQ--QPTARSVIGTPEFMAPE-LY 253
H I+HRDLK +N+ + VK+ D GLAI +Q Q GTP +++PE L
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 254 EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIK--PASLAKVNDPQIK 311
++ Y + VD+++ G+ IL ++ YP ++ ++++++ +G P+ P+ K
Sbjct: 180 KDPYGKPVDMWACGV-ILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 238
Query: 312 GFIEKCL-VPASERLSAKDLLKDPFL 336
I K L + ++R++A + LK P++
Sbjct: 239 DLINKMLTINPAKRITASEALKHPWI 264
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 101/203 (49%), Gaps = 12/203 (5%)
Query: 80 RYDEV--LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ-LPGDLQKLYSEVHLLKSLK 136
RY+ V +G GA+ TVYKA D +G VA V++ + + LP + + + L++ +
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELF--TSGNLRQYRKKH--KNVDIKVIKNWARQILHG 192
NVV+ + +T +F +LR Y K + + IK+ RQ L G
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-IAMQQPTARSVIGTPEFMAPE 251
L +LH++ I+HRDLK +NI V G VK+ D GLA I Q V+ T + APE
Sbjct: 125 LDFLHANC--IVHRDLKPENILVTSG-GTVKLADFGLARIYSYQMALFPVVVTLWYRAPE 181
Query: 252 -LYEEEYNELVDIYSFGMCILEM 273
L + Y VD++S G EM
Sbjct: 182 VLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 131/262 (50%), Gaps = 16/262 (6%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQ-KLYSEVHLLKSLKDDNVV 141
+ LG+G+F V A+ G +VA I+ + D+Q ++ E+ L+ L+ +++
Sbjct: 19 KTLGEGSFGKVKLAYHTTTGQKVALK--IINKKVLAKSDMQGRIEREISYLRLLRHPHII 76
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
K Y V K + M+ E + L Y + + + + + +QI+ + Y H H
Sbjct: 77 KLYD--VIKSKDEIIMVIE-YAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK- 132
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT-ARSVIGTPEFMAPELYEEEY--N 258
I+HRDLK +N+ ++ H VKI D GL+ M ++ G+P + APE+ +
Sbjct: 133 -IVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 190
Query: 259 ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL 318
VD++S G+ + M+ P+ + P +FK +++G+ +L K P G I++ L
Sbjct: 191 PEVDVWSCGVILYVMLCRRLPFDDESIPV-LFKNISNGV--YTLPKFLSPGAAGLIKRML 247
Query: 319 -VPASERLSAKDLLKDPFLQVE 339
V R+S ++++D + +V+
Sbjct: 248 IVNPLNRISIHEIMQDDWFKVD 269
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 131/262 (50%), Gaps = 16/262 (6%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQ-KLYSEVHLLKSLKDDNVV 141
+ LG+G+F V A+ G +VA I+ + D+Q ++ E+ L+ L+ +++
Sbjct: 20 KTLGEGSFGKVKLAYHTTTGQKVALK--IINKKVLAKSDMQGRIEREISYLRLLRHPHII 77
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
K Y V K + M+ E + L Y + + + + + +QI+ + Y H H
Sbjct: 78 KLYD--VIKSKDEIIMVIE-YAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK- 133
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT-ARSVIGTPEFMAPELYEEEY--N 258
I+HRDLK +N+ ++ H VKI D GL+ M ++ G+P + APE+ +
Sbjct: 134 -IVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 191
Query: 259 ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL 318
VD++S G+ + M+ P+ + P +FK +++G+ +L K P G I++ L
Sbjct: 192 PEVDVWSCGVILYVMLCRRLPFDDESIPV-LFKNISNGV--YTLPKFLSPGAAGLIKRML 248
Query: 319 -VPASERLSAKDLLKDPFLQVE 339
V R+S ++++D + +V+
Sbjct: 249 IVNPLNRISIHEIMQDDWFKVD 270
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 131/262 (50%), Gaps = 16/262 (6%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQ-KLYSEVHLLKSLKDDNVV 141
+ LG+G+F V A+ G +VA I+ + D+Q ++ E+ L+ L+ +++
Sbjct: 10 KTLGEGSFGKVKLAYHTTTGQKVALK--IINKKVLAKSDMQGRIEREISYLRLLRHPHII 67
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
K Y V K + M+ E + L Y + + + + + +QI+ + Y H H
Sbjct: 68 KLYD--VIKSKDEIIMVIE-YAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK- 123
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT-ARSVIGTPEFMAPELYEEEY--N 258
I+HRDLK +N+ ++ H VKI D GL+ M ++ G+P + APE+ +
Sbjct: 124 -IVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 181
Query: 259 ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL 318
VD++S G+ + M+ P+ + P +FK +++G+ +L K P G I++ L
Sbjct: 182 PEVDVWSCGVILYVMLCRRLPFDDESIPV-LFKNISNGV--YTLPKFLSPGAAGLIKRML 238
Query: 319 -VPASERLSAKDLLKDPFLQVE 339
V R+S ++++D + +V+
Sbjct: 239 IVNPLNRISIHEIMQDDWFKVD 260
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 127/260 (48%), Gaps = 11/260 (4%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A + + +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 20 LGKGKFGNVYLARERQSKFILAL-KVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLY 78
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 79 GYFHDATR--VYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR--VI 134
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYE-EEYNELVDI 263
HRD+K +N+ + G++GE+KI D G ++ ++ GT +++ PE+ E ++E VD+
Sbjct: 135 HRDIKPENLLL-GSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 193
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVP-AS 322
+S G+ E + P+ E + +++++ + + I + L AS
Sbjct: 194 WSLGVLCYEFLVGMPPF-EAHTYQETYRRISR--VEFTFPDFVTEGARDLISRLLKHNAS 250
Query: 323 ERLSAKDLLKDPFLQVENQK 342
+RL+ ++L+ P+++ + K
Sbjct: 251 QRLTLAEVLEHPWIKANSSK 270
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 20/230 (8%)
Query: 77 RYVRYDEVLGKGAFKTV----YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLL 132
R+++Y LGKG F +V Y + G VA +++ P + E+ +L
Sbjct: 10 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG----PDQQRDFQREIQIL 65
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILH 191
K+L D +VK+ ++++ ++ E SG LR + ++H+ +D + ++ QI
Sbjct: 66 KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICK 125
Query: 192 GLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE----- 246
G+ YL S +HRDL NI V + VKI D GLA + V+ P
Sbjct: 126 GMEYLGSRR--CVHRDLAARNILVE-SEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF 182
Query: 247 FMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTS 295
+ APE L + ++ D++SFG+ + E+ F Y C A+ + + S
Sbjct: 183 WYAPESLSDNIFSRQSDVWSFGVVLYEL--FTYCDKSCSPSAEFLRMMGS 230
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 109/228 (47%), Gaps = 17/228 (7%)
Query: 76 GRYVRYDEVLGKGAFKTVYKAFDEFAGIEVA---WSRVKIDDVLQLPGDLQKLYSEVHLL 132
G Y+ D LG G F V E G +VA +R KI L + G +++ E+ L
Sbjct: 16 GHYILGD-TLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRS-LDVVGKIRR---EIQNL 70
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHG 192
K + +++K Y+ V + M+ E + G L Y K+ +D K + +QIL G
Sbjct: 71 KLFRHPHIIKLYQ--VISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSG 128
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT-ARSVIGTPEFMAPE 251
+ Y H H ++HRDLK +N+ ++ H KI D GL+ M R G+P + APE
Sbjct: 129 VDYCHRHM--VVHRDLKPENVLLDA-HMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPE 185
Query: 252 LYEEEY--NELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGI 297
+ VDI+S G+ + ++ P+ + P +FKK+ GI
Sbjct: 186 VISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT-LFKKICDGI 232
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 18/211 (8%)
Query: 77 RYVRYDEVLGKGAFKTV----YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLL 132
R+++Y LGKG F +V Y + G VA +++ P + E+ +L
Sbjct: 11 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG----PDQQRDFQREIQIL 66
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILH 191
K+L D +VK+ ++++ ++ E SG LR + ++H+ +D + ++ QI
Sbjct: 67 KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICK 126
Query: 192 GLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE----- 246
G+ YL S +HRDL NI V + VKI D GLA + V+ P
Sbjct: 127 GMEYLGSRR--CVHRDLAARNILVE-SEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF 183
Query: 247 FMAPE-LYEEEYNELVDIYSFGMCILEMVTF 276
+ APE L + ++ D++SFG+ + E+ T+
Sbjct: 184 WYAPESLSDNIFSRQSDVWSFGVVLYELFTY 214
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 127/260 (48%), Gaps = 11/260 (4%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A + + +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 20 LGKGKFGNVYLARERQSKFILAL-KVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLY 78
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 79 GYFHDATR--VYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR--VI 134
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYE-EEYNELVDI 263
HRD+K +N+ + G++GE+KI D G ++ ++ GT +++ PE+ E ++E VD+
Sbjct: 135 HRDIKPENLLL-GSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDL 193
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVP-AS 322
+S G+ E + P+ E + +++++ + + I + L AS
Sbjct: 194 WSLGVLCYEFLVGMPPF-EAHTYQETYRRISR--VEFTFPDFVTEGARDLISRLLKHNAS 250
Query: 323 ERLSAKDLLKDPFLQVENQK 342
+RL+ ++L+ P+++ + K
Sbjct: 251 QRLTLAEVLEHPWIKANSSK 270
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 118/256 (46%), Gaps = 27/256 (10%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDV---LQLPGDLQKLYSEVHLLKSL 135
+ Y++ +GKG F V+K VA + + D ++ Q+ EV ++ +L
Sbjct: 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNL--RQYRKKHKNVDIKVIKNWARQILHGL 193
N+VK Y + + M+ E G+L R K H + V I G+
Sbjct: 81 NHPNIVKLYGLMHNPPR----MVMEFVPCGDLYHRLLDKAHP-IKWSVKLRLMLDIALGI 135
Query: 194 VYLHSHNPPIIHRDLKCDNIFVNG--NHGEV--KIGDLGLAIAMQQPTARSV---IGTPE 246
Y+ + NPPI+HRDL+ NIF+ + V K+ D GL+ Q + SV +G +
Sbjct: 136 EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS----QQSVHSVSGLLGNFQ 191
Query: 247 FMAPELY---EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT--SGIKPAS 301
+MAPE EE Y E D YSF M + ++T E P+ E F + G++P +
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRP-T 250
Query: 302 LAKVNDPQIKGFIEKC 317
+ + P+++ IE C
Sbjct: 251 IPEDCPPRLRNVIELC 266
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 18/211 (8%)
Query: 77 RYVRYDEVLGKGAFKTV----YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLL 132
R+++Y LGKG F +V Y + G VA +++ P + E+ +L
Sbjct: 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG----PDQQRDFQREIQIL 78
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILH 191
K+L D +VK+ ++++ ++ E SG LR + ++H+ +D + ++ QI
Sbjct: 79 KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICK 138
Query: 192 GLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE----- 246
G+ YL S +HRDL NI V + VKI D GLA + V+ P
Sbjct: 139 GMEYLGSRR--CVHRDLAARNILVE-SEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF 195
Query: 247 FMAPE-LYEEEYNELVDIYSFGMCILEMVTF 276
+ APE L + ++ D++SFG+ + E+ T+
Sbjct: 196 WYAPESLSDNIFSRQSDVWSFGVVLYELFTY 226
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 77 RYVRYDEVLGKGAFKTV----YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLL 132
R+++Y LGKG F +V Y + G VA +++ P + E+ +L
Sbjct: 7 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG----PDQQRDFQREIQIL 62
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILH 191
K+L D +VK+ + + ++ E SG LR + ++H+ +D + ++ QI
Sbjct: 63 KALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICK 122
Query: 192 GLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE----- 246
G+ YL S +HRDL NI V + VKI D GLA + V+ P
Sbjct: 123 GMEYLGSRR--CVHRDLAARNILVE-SEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIF 179
Query: 247 FMAPE-LYEEEYNELVDIYSFGMCILEMVTF 276
+ APE L + ++ D++SFG+ + E+ T+
Sbjct: 180 WYAPESLSDNIFSRQSDVWSFGVVLYELFTY 210
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 107/211 (50%), Gaps = 8/211 (3%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ + +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 42 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 100
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 101 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 156
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEEE-YNELVDI 263
HRD+K +N+ + G+ GE+KI D G ++ ++ GT +++ PE+ E ++E VD+
Sbjct: 157 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 215
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+S G+ E + + P+ E + +K+++
Sbjct: 216 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 245
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 110/207 (53%), Gaps = 18/207 (8%)
Query: 77 RYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ-LPGDLQKLYSEVHLLKSL 135
RY R + LG+G + VYKA D VA R++++ + +PG + EV LLK L
Sbjct: 35 RYRRITK-LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR---EVSLLKEL 90
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVY 195
+ N+++ KS + + +++I E + +L++Y K+ +V ++VIK++ Q+++G+ +
Sbjct: 91 QHRNIIEL-KSVIHHNHR-LHLIFE-YAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNF 147
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGE----VKIGDLGLAIAMQQPTARSV--IGTPEFMA 249
HS +HRDLK N+ ++ + +KIGD GLA A P + I T +
Sbjct: 148 CHSRR--CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRP 205
Query: 250 PE--LYEEEYNELVDIYSFGMCILEMV 274
PE L Y+ VDI+S EM+
Sbjct: 206 PEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 109/210 (51%), Gaps = 17/210 (8%)
Query: 77 RYVRYDEVLGKGAFKTV----YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLL 132
RY++ LG+G F V Y ++ G VA +K QL Q+ E+ +L
Sbjct: 8 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQR---EIEIL 64
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHG 192
++L +++VK+ D +K+V ++ E G+LR Y +H V + + +A+QI G
Sbjct: 65 RTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH-CVGLAQLLLFAQQICEG 123
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP----TARSVIGTPEF- 247
+ YLH+ + IHR L N+ ++ N VKIGD GLA A+ + R +P F
Sbjct: 124 MAYLHAQH--YIHRALAARNVLLD-NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 180
Query: 248 MAPE-LYEEEYNELVDIYSFGMCILEMVTF 276
APE L E ++ D++SFG+ + E++T+
Sbjct: 181 YAPECLKECKFYYASDVWSFGVTLYELLTY 210
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 109/210 (51%), Gaps = 17/210 (8%)
Query: 77 RYVRYDEVLGKGAFKTV----YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLL 132
RY++ LG+G F V Y ++ G VA +K QL Q+ E+ +L
Sbjct: 9 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQR---EIEIL 65
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHG 192
++L +++VK+ D +K+V ++ E G+LR Y +H V + + +A+QI G
Sbjct: 66 RTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH-CVGLAQLLLFAQQICEG 124
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP----TARSVIGTPEF- 247
+ YLH+ + IHR L N+ ++ N VKIGD GLA A+ + R +P F
Sbjct: 125 MAYLHAQH--YIHRALAARNVLLD-NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 181
Query: 248 MAPE-LYEEEYNELVDIYSFGMCILEMVTF 276
APE L E ++ D++SFG+ + E++T+
Sbjct: 182 YAPECLKECKFYYASDVWSFGVTLYELLTY 211
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 107/211 (50%), Gaps = 8/211 (3%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ + +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 21 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 80 GYFHDATR--VYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR--VI 135
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEEE-YNELVDI 263
HRD+K +N+ + G+ GE+KI D G ++ ++ GT +++ PE+ E ++E VD+
Sbjct: 136 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 194
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+S G+ E + + P+ E + +K+++
Sbjct: 195 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 224
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 107/211 (50%), Gaps = 8/211 (3%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ + +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 75 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 130
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEEE-YNELVDI 263
HRD+K +N+ + G+ GE+KI D G ++ ++ GT +++ PE+ E ++E VD+
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+S G+ E + + P+ E + +K+++
Sbjct: 190 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 219
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 107/211 (50%), Gaps = 8/211 (3%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ + +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 33 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 91
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 92 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 147
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEEE-YNELVDI 263
HRD+K +N+ + G+ GE+KI D G ++ ++ GT +++ PE+ E ++E VD+
Sbjct: 148 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 206
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+S G+ E + + P+ E + +K+++
Sbjct: 207 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 236
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 113/252 (44%), Gaps = 19/252 (7%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDV---LQLPGDLQKLYSEVHLLKSL 135
+ Y++ +GKG F V+K VA + + D ++ Q+ EV ++ +L
Sbjct: 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNL--RQYRKKHKNVDIKVIKNWARQILHGL 193
N+VK Y + + M+ E G+L R K H + V I G+
Sbjct: 81 NHPNIVKLYGLMHNPPR----MVMEFVPCGDLYHRLLDKAHP-IKWSVKLRLMLDIALGI 135
Query: 194 VYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV---IGTPEFMAP 250
Y+ + NPPI+HRDL+ NIF+ + ++ Q + SV +G ++MAP
Sbjct: 136 EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAP 195
Query: 251 ELY---EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT--SGIKPASLAKV 305
E EE Y E D YSF M + ++T E P+ E F + G++P ++ +
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRP-TIPED 254
Query: 306 NDPQIKGFIEKC 317
P+++ IE C
Sbjct: 255 CPPRLRNVIELC 266
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 107/211 (50%), Gaps = 8/211 (3%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ + +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 78 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 133
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEEE-YNELVDI 263
HRD+K +N+ + G+ GE+KI D G ++ ++ GT +++ PE+ E ++E VD+
Sbjct: 134 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDL 192
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+S G+ E + + P+ E + +K+++
Sbjct: 193 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 222
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 107/211 (50%), Gaps = 8/211 (3%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ + +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 21 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 80 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 135
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYE-EEYNELVDI 263
HRD+K +N+ + G+ GE+KI D G ++ ++ GT +++ PE+ E ++E VD+
Sbjct: 136 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 194
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+S G+ E + + P+ E + +K+++
Sbjct: 195 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 224
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 107/211 (50%), Gaps = 8/211 (3%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ + +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 78 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 133
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYE-EEYNELVDI 263
HRD+K +N+ + G+ GE+KI D G ++ ++ GT +++ PE+ E ++E VD+
Sbjct: 134 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 192
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+S G+ E + + P+ E + +K+++
Sbjct: 193 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 222
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 107/211 (50%), Gaps = 8/211 (3%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ + +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 20 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 78
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 79 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 134
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEEE-YNELVDI 263
HRD+K +N+ + G+ GE+KI D G ++ ++ GT +++ PE+ E ++E VD+
Sbjct: 135 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 193
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+S G+ E + + P+ E + +K+++
Sbjct: 194 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 223
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 117/256 (45%), Gaps = 27/256 (10%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDV---LQLPGDLQKLYSEVHLLKSL 135
+ Y++ +GKG F V+K VA + + D ++ Q+ EV ++ +L
Sbjct: 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNL--RQYRKKHKNVDIKVIKNWARQILHGL 193
N+VK Y + + M+ E G+L R K H + V I G+
Sbjct: 81 NHPNIVKLYGLMHNPPR----MVMEFVPCGDLYHRLLDKAHP-IKWSVKLRLMLDIALGI 135
Query: 194 VYLHSHNPPIIHRDLKCDNIFVNG--NHGEV--KIGDLGLAIAMQQPTARSV---IGTPE 246
Y+ + NPPI+HRDL+ NIF+ + V K+ D G + Q + SV +G +
Sbjct: 136 EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS----QQSVHSVSGLLGNFQ 191
Query: 247 FMAPELY---EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT--SGIKPAS 301
+MAPE EE Y E D YSF M + ++T E P+ E F + G++P +
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRP-T 250
Query: 302 LAKVNDPQIKGFIEKC 317
+ + P+++ IE C
Sbjct: 251 IPEDCPPRLRNVIELC 266
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 117/242 (48%), Gaps = 22/242 (9%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 152
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIG---TPEFMAPELYEE-- 255
IIHRDLK N+ VN + E+KI D GLA + TA + G T + APE+
Sbjct: 153 --IIHRDLKPSNLAVNED-CELKILDFGLA----RHTADEMTGYVATRWYRAPEIMLNWM 205
Query: 256 EYNELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGF 313
YN+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNY 265
Query: 314 IE 315
I+
Sbjct: 266 IQ 267
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 106/211 (50%), Gaps = 8/211 (3%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ + +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 21 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 80 GYFHDATR--VYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR--VI 135
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEEE-YNELVDI 263
HRD+K +N+ + G+ GE+KI D G ++ + GT +++ PE+ E ++E VD+
Sbjct: 136 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDL 194
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+S G+ E + + P+ E + +K+++
Sbjct: 195 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 224
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 117/242 (48%), Gaps = 22/242 (9%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 152
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIG---TPEFMAPELYEE-- 255
IIHRDLK N+ VN + E+KI D GLA + TA + G T + APE+
Sbjct: 153 --IIHRDLKPSNLAVNED-CELKILDFGLA----RHTADEMTGYVATRWYRAPEIMLNWM 205
Query: 256 EYNELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGF 313
YN+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNY 265
Query: 314 IE 315
I+
Sbjct: 266 IQ 267
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 106/211 (50%), Gaps = 8/211 (3%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ + +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 42 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 100
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 101 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 156
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEEE-YNELVDI 263
HRD+K +N+ + G+ GE+KI D G ++ + GT +++ PE+ E ++E VD+
Sbjct: 157 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDL 215
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+S G+ E + + P+ E + +K+++
Sbjct: 216 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 245
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 147
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 148 --IIHRDLKPSNLAVNED-SELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 203
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 204 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 262
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 117/242 (48%), Gaps = 22/242 (9%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 152
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIG---TPEFMAPELYEE-- 255
IIHRDLK N+ VN + E+KI D GLA + TA + G T + APE+
Sbjct: 153 --IIHRDLKPSNLAVNED-CELKILDFGLA----RHTADEMTGYVATRWYRAPEIMLNWM 205
Query: 256 EYNELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGF 313
YN+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNY 265
Query: 314 IE 315
I+
Sbjct: 266 IQ 267
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 140/312 (44%), Gaps = 45/312 (14%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 145
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA A + T + APE+ YN
Sbjct: 146 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMA-GFVATRWYRAPEIMLNWMHYN 201
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSE-----------CKNP-AQIFKKVTSGIKP----- 299
+ VDI+S G + E++T +P ++ P A++ KK++S
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 300 -ASLAKVN--------DPQIKGFIEKCLVPASER--LSAKDLLKDPFLQVEN-QKEPICD 347
A + K+N +P +EK LV S++ +A+ L F Q + EP+ D
Sbjct: 262 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 321
Query: 348 PLKLPIQSLKML 359
P +S +L
Sbjct: 322 PYDQSFESRDLL 333
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKXQKLTDDHV-QFLIYQILRGLKYIHSAD 145
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 146 --IIHRDLKPSNLAVNED-XELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 201
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 145
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPE--LYEEEYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE L YN
Sbjct: 146 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNAMHYN 201
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 107/211 (50%), Gaps = 8/211 (3%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ + +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 17 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 75
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 76 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 131
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYE-EEYNELVDI 263
HRD+K +N+ + G+ GE+KI D G ++ ++ GT +++ PE+ E ++E VD+
Sbjct: 132 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDL 190
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+S G+ E + + P+ E + +K+++
Sbjct: 191 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 220
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 106/211 (50%), Gaps = 8/211 (3%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ + +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 75 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 130
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYE-EEYNELVDI 263
HRD+K +N+ + G+ GE+KI D G ++ + GT +++ PE+ E ++E VD+
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+S G+ E + + P+ E + +K+++
Sbjct: 190 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 219
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 107/211 (50%), Gaps = 8/211 (3%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ + +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 15 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 73
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 74 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 129
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYE-EEYNELVDI 263
HRD+K +N+ + G+ GE+KI D G ++ ++ GT +++ PE+ E ++E VD+
Sbjct: 130 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 188
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+S G+ E + + P+ E + +K+++
Sbjct: 189 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 218
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 107/211 (50%), Gaps = 8/211 (3%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ + +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 75 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 130
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYE-EEYNELVDI 263
HRD+K +N+ + G+ GE+KI D G ++ ++ GT +++ PE+ E ++E VD+
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+S G+ E + + P+ E + +K+++
Sbjct: 190 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 219
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 151
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 152 --IIHRDLKPSNLAVNED-SELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 207
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 208 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 266
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 106/211 (50%), Gaps = 8/211 (3%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ + +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 21 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 80 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 135
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYE-EEYNELVDI 263
HRD+K +N+ + G+ GE+KI D G ++ ++ GT +++ PE E ++E VD+
Sbjct: 136 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDL 194
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+S G+ E + + P+ E + +K+++
Sbjct: 195 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 224
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 107/211 (50%), Gaps = 8/211 (3%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ + +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 78 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 133
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYE-EEYNELVDI 263
HRD+K +N+ + G+ GE+KI D G ++ ++ GT +++ PE+ E ++E VD+
Sbjct: 134 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 192
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+S G+ E + + P+ E + +K+++
Sbjct: 193 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 222
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVK--KLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 157
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 158 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 213
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 214 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 272
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKXQKLTDDHV-QFLIYQILRGLKYIHSAD 145
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 146 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 201
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 140/312 (44%), Gaps = 45/312 (14%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 141
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA A + T + APE+ YN
Sbjct: 142 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMA-GFVATRWYRAPEIMLNWMHYN 197
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSE-----------CKNP-AQIFKKVTSGIKP----- 299
+ VDI+S G + E++T +P ++ P A++ KK++S
Sbjct: 198 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 257
Query: 300 -ASLAKVN--------DPQIKGFIEKCLVPASER--LSAKDLLKDPFLQVEN-QKEPICD 347
A + K+N +P +EK LV S++ +A+ L F Q + EP+ D
Sbjct: 258 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 317
Query: 348 PLKLPIQSLKML 359
P +S +L
Sbjct: 318 PYDQSFESRDLL 329
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 106/211 (50%), Gaps = 8/211 (3%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ + +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 18 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 76
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 77 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 132
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYE-EEYNELVDI 263
HRD+K +N+ + G+ GE+KI D G ++ + GT +++ PE+ E ++E VD+
Sbjct: 133 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDL 191
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+S G+ E + + P+ E + +K+++
Sbjct: 192 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 221
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 157
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 158 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 213
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 214 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 272
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 157
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 158 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 213
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 214 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 272
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 110
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 111 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 168
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 169 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 224
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 225 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 283
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 15/233 (6%)
Query: 127 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 186
+E+ +LK L ++K K++ D + + + EL G L +K + K +
Sbjct: 203 TEIEILKKLNHPCIIKI-KNFFDAEDYYI--VLELMEGGELFDKVVGNKRLKEATCKLYF 259
Query: 187 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGE--VKIGDLGLA-IAMQQPTARSVIG 243
Q+L + YLH + IIHRDLK +N+ ++ + +KI D G + I + R++ G
Sbjct: 260 YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 317
Query: 244 TPEFMAPELY----EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG--- 296
TP ++APE+ YN VD +S G+ + ++ P+SE + + ++TSG
Sbjct: 318 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 377
Query: 297 IKPASLAKVNDPQIKGFIEKCLVPASERLSAKDLLKDPFLQVENQKEPICDPL 349
P A+V++ + + +V R + ++ L+ P+LQ E+ K D L
Sbjct: 378 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLL 430
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 150
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 151 --IIHRDLKPSNLAVNED-XELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 206
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 207 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 265
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 15/233 (6%)
Query: 127 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 186
+E+ +LK L ++K K++ D + + + EL G L +K + K +
Sbjct: 189 TEIEILKKLNHPCIIKI-KNFFDAEDYYI--VLELMEGGELFDKVVGNKRLKEATCKLYF 245
Query: 187 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGE--VKIGDLGLA-IAMQQPTARSVIG 243
Q+L + YLH + IIHRDLK +N+ ++ + +KI D G + I + R++ G
Sbjct: 246 YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 303
Query: 244 TPEFMAPELY----EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG--- 296
TP ++APE+ YN VD +S G+ + ++ P+SE + + ++TSG
Sbjct: 304 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 363
Query: 297 IKPASLAKVNDPQIKGFIEKCLVPASERLSAKDLLKDPFLQVENQKEPICDPL 349
P A+V++ + + +V R + ++ L+ P+LQ E+ K D L
Sbjct: 364 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLL 416
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 110/209 (52%), Gaps = 17/209 (8%)
Query: 77 RYVRYDEVLGKGAFKTV----YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLL 132
RY++ LG+G F V Y ++ G VA +K D Q ++ E+ +L
Sbjct: 14 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQ---EIDIL 70
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHG 192
++L ++++K+ D +K++ ++ E G+LR Y +H ++ + + +A+QI G
Sbjct: 71 RTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEG 129
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP----TARSVIGTPEF- 247
+ YLHS + IHR+L N+ ++ N VKIGD GLA A+ + R +P F
Sbjct: 130 MAYLHSQH--YIHRNLAARNVLLD-NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 186
Query: 248 MAPE-LYEEEYNELVDIYSFGMCILEMVT 275
APE L E ++ D++SFG+ + E++T
Sbjct: 187 YAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 145
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 146 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GXVATRWYRAPEIMLNWMHYN 201
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 108 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 165
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 166 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 221
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 222 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 280
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 106
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 107 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 164
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 165 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 220
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 221 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 279
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 151
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 152 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 207
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 208 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 266
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 106/211 (50%), Gaps = 8/211 (3%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ + +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 21 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 80 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 135
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYE-EEYNELVDI 263
HRD+K +N+ + G+ GE+KI D G ++ + GT +++ PE+ E ++E VD+
Sbjct: 136 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDL 194
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+S G+ E + + P+ E + +K+++
Sbjct: 195 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 224
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 106/211 (50%), Gaps = 8/211 (3%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ + +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 17 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 75
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 76 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 131
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYE-EEYNELVDI 263
HRD+K +N+ + G+ GE+KI D G ++ + GT +++ PE+ E ++E VD+
Sbjct: 132 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDL 190
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+S G+ E + + P+ E + +K+++
Sbjct: 191 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 220
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 106/211 (50%), Gaps = 8/211 (3%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ + +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 75 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 130
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYE-EEYNELVDI 263
HRD+K +N+ + G+ GE+KI D G ++ + GT +++ PE+ E ++E VD+
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+S G+ E + + P+ E + +K+++
Sbjct: 190 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 219
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 98
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 99 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 156
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 157 --IIHRDLKPSNLAVNED-XELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 212
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 213 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 271
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 124/261 (47%), Gaps = 13/261 (4%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ +A +V L+ G +L E+ + L+ N+++ Y
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMAL-KVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMY 80
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D +K + ++ E G L + +KH D + + ++ L Y H +I
Sbjct: 81 NYFHD--RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK--VI 136
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYE-EEYNELVDI 263
HRD+K +N+ + G GE+KI D G ++ R + GT +++ PE+ E + ++E VD+
Sbjct: 137 HRDIKPENLLM-GYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDL 195
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIK-PASLAKVNDPQIKGFIEKCL-VPA 321
+ G+ E + P+ + + V +K P L+ + K I K L
Sbjct: 196 WCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGS----KDLISKLLRYHP 251
Query: 322 SERLSAKDLLKDPFLQVENQK 342
+RL K +++ P+++ +++
Sbjct: 252 PQRLPLKGVMEHPWVKANSRR 272
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 147
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 148 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 203
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 204 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 262
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 150
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 151 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 206
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 207 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 265
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 106/211 (50%), Gaps = 8/211 (3%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ + +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 16 LGKGKFGNVYLAREKNSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 75 GYFHDSTR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKK--VI 130
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYE-EEYNELVDI 263
HRD+K +N+ + G+ GE+KI D G ++ ++ GT +++ PE+ E ++E VD+
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+S G+ E + + P+ E +K+++
Sbjct: 190 WSLGVLCYEFLVGKPPF-EANTYQDTYKRIS 219
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 124/261 (47%), Gaps = 13/261 (4%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ +A +V L+ G +L E+ + L+ N+++ Y
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMAL-KVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMY 81
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D +K + ++ E G L + +KH D + + ++ L Y H +I
Sbjct: 82 NYFHD--RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK--VI 137
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYE-EEYNELVDI 263
HRD+K +N+ + G GE+KI D G ++ R + GT +++ PE+ E + ++E VD+
Sbjct: 138 HRDIKPENLLM-GYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDL 196
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIK-PASLAKVNDPQIKGFIEKCL-VPA 321
+ G+ E + P+ + + V +K P L+ + K I K L
Sbjct: 197 WCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGS----KDLISKLLRYHP 252
Query: 322 SERLSAKDLLKDPFLQVENQK 342
+RL K +++ P+++ +++
Sbjct: 253 PQRLPLKGVMEHPWVKANSRR 273
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 145
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 146 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 201
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 106/211 (50%), Gaps = 8/211 (3%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ + +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 75 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 130
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYE-EEYNELVDI 263
HRD+K +N+ + G+ GE+KI D G ++ + GT +++ PE+ E ++E VD+
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+S G+ E + + P+ E + +K+++
Sbjct: 190 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 219
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 145
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 146 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 201
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 147
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 148 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 203
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 204 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 262
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 147
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 148 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 203
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 204 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 262
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 98
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 99 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 156
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 157 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 212
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 213 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 271
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 103/205 (50%), Gaps = 21/205 (10%)
Query: 83 EVLGKGAFKTVYKAF----DEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDD 138
+VLG GAF TVYK E I VA +KI + P + E ++ S+
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVA---IKILNETTGPKANVEFMDEALIMASMDHP 100
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLVYLH 197
++V+ + T+ ++T+L G L +Y +HK N+ +++ NW QI G++YL
Sbjct: 101 HLVRLLGVCLS---PTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE 157
Query: 198 SHNPPIIHRDLKCDNIFVNG-NHGEVKIGDLGLAIAMQ----QPTARSVIGTPEFMAPE- 251
++HRDL N+ V NH VKI D GLA ++ + A ++MA E
Sbjct: 158 ERR--LVHRDLAARNVLVKSPNH--VKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 213
Query: 252 LYEEEYNELVDIYSFGMCILEMVTF 276
++ ++ D++S+G+ I E++TF
Sbjct: 214 IHYRKFTHQSDVWSYGVTIWELMTF 238
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 145
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 146 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 201
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 152
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 153 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 208
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 209 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 267
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 145
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA A + T + APE+ YN
Sbjct: 146 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMA-GFVATRWYRAPEIMLNWMHYN 201
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 145
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 146 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 201
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 106/211 (50%), Gaps = 8/211 (3%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ + +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 78 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 133
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEEE-YNELVDI 263
HRD+K +N+ + G+ GE+KI D G ++ + GT +++ PE+ E ++E VD+
Sbjct: 134 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDL 192
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+S G+ E + + P+ E + +K+++
Sbjct: 193 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 222
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 145
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 146 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 201
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 106/211 (50%), Gaps = 8/211 (3%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ + +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 75 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 130
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYE-EEYNELVDI 263
HRD+K +N+ + G+ GE+KI D G ++ + GT +++ PE+ E ++E VD+
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+S G+ E + + P+ E + +K+++
Sbjct: 190 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 219
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 145
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 146 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 201
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 120/240 (50%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K PS + D+ LG G+F V + +G A + V++
Sbjct: 43 AKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK 102
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 103 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRF 159
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 160 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGAT 216
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
++ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 217 W-TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 274
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 139/312 (44%), Gaps = 45/312 (14%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKSQKLTDDHV-QFLIYQILRGLKYIHSAD 145
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GL + T + APE+ YN
Sbjct: 146 --IIHRDLKPSNLAVNED-SELKILDFGLCRHTDDEMT-GYVATRWYRAPEIMLNWMHYN 201
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSE-----------CKNP-AQIFKKVTSGIKP----- 299
+ VDI+S G + E++T +P ++ P A++ KK++S
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 300 -ASLAKVN--------DPQIKGFIEKCLVPASER--LSAKDLLKDPFLQVEN-QKEPICD 347
+ K+N +P +EK LV S++ +A+ L F Q + EP+ D
Sbjct: 262 LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 321
Query: 348 PLKLPIQSLKML 359
P ++S +L
Sbjct: 322 PYDQSLESRDLL 333
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 150
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 151 --IIHRDLKPSNLAVNED-XELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 206
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 207 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 265
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 141
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 142 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 197
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 198 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 256
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 145
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 146 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 201
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 85
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 86 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 143
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 144 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 199
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 200 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 258
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 15/233 (6%)
Query: 127 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 186
+E+ +LK L ++K K++ D + + + EL G L +K + K +
Sbjct: 70 TEIEILKKLNHPCIIKI-KNFFDAEDYYI--VLELMEGGELFDKVVGNKRLKEATCKLYF 126
Query: 187 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGE--VKIGDLGLA-IAMQQPTARSVIG 243
Q+L + YLH + IIHRDLK +N+ ++ + +KI D G + I + R++ G
Sbjct: 127 YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 184
Query: 244 TPEFMAPELY----EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG--- 296
TP ++APE+ YN VD +S G+ + ++ P+SE + + ++TSG
Sbjct: 185 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 244
Query: 297 IKPASLAKVNDPQIKGFIEKCLVPASERLSAKDLLKDPFLQVENQKEPICDPL 349
P A+V++ + + +V R + ++ L+ P+LQ E+ K D L
Sbjct: 245 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLL 297
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 106/211 (50%), Gaps = 8/211 (3%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ + +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 16 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 75 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 130
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYE-EEYNELVDI 263
HRD+K +N+ + G+ GE+KI D G ++ + GT +++ PE+ E ++E VD+
Sbjct: 131 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDL 189
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+S G+ E + + P+ E + +K+++
Sbjct: 190 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 219
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 150
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 151 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 206
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 207 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 265
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 86
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 87 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 144
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 145 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 200
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 201 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 259
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 84
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 85 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 142
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 143 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 198
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 199 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 257
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 15/233 (6%)
Query: 127 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 186
+E+ +LK L ++K K++ D + + + EL G L +K + K +
Sbjct: 64 TEIEILKKLNHPCIIKI-KNFFDAEDYYI--VLELMEGGELFDKVVGNKRLKEATCKLYF 120
Query: 187 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGE--VKIGDLGLA-IAMQQPTARSVIG 243
Q+L + YLH + IIHRDLK +N+ ++ + +KI D G + I + R++ G
Sbjct: 121 YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 178
Query: 244 TPEFMAPELY----EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG--- 296
TP ++APE+ YN VD +S G+ + ++ P+SE + + ++TSG
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 238
Query: 297 IKPASLAKVNDPQIKGFIEKCLVPASERLSAKDLLKDPFLQVENQKEPICDPL 349
P A+V++ + + +V R + ++ L+ P+LQ E+ K D L
Sbjct: 239 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLL 291
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 124/261 (47%), Gaps = 13/261 (4%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ +A +V L+ G +L E+ + L+ N+++ Y
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMAL-KVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMY 80
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D +K + ++ E G L + +KH D + + ++ L Y H +I
Sbjct: 81 NYFHD--RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK--VI 136
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYE-EEYNELVDI 263
HRD+K +N+ + G GE+KI D G ++ R + GT +++ PE+ E + ++E VD+
Sbjct: 137 HRDIKPENLLM-GYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDL 195
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIK-PASLAKVNDPQIKGFIEKCL-VPA 321
+ G+ E + P+ + + V +K P L+ + K I K L
Sbjct: 196 WCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGS----KDLISKLLRYHP 251
Query: 322 SERLSAKDLLKDPFLQVENQK 342
+RL K +++ P+++ +++
Sbjct: 252 PQRLPLKGVMEHPWVKANSRR 272
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 15/233 (6%)
Query: 127 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 186
+E+ +LK L ++K K++ D + + + EL G L +K + K +
Sbjct: 63 TEIEILKKLNHPCIIKI-KNFFDAEDYYI--VLELMEGGELFDKVVGNKRLKEATCKLYF 119
Query: 187 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGE--VKIGDLGLA-IAMQQPTARSVIG 243
Q+L + YLH + IIHRDLK +N+ ++ + +KI D G + I + R++ G
Sbjct: 120 YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 177
Query: 244 TPEFMAPELY----EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG--- 296
TP ++APE+ YN VD +S G+ + ++ P+SE + + ++TSG
Sbjct: 178 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 237
Query: 297 IKPASLAKVNDPQIKGFIEKCLVPASERLSAKDLLKDPFLQVENQKEPICDPL 349
P A+V++ + + +V R + ++ L+ P+LQ E+ K D L
Sbjct: 238 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLL 290
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 15/233 (6%)
Query: 127 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 186
+E+ +LK L ++K K++ D + + + EL G L +K + K +
Sbjct: 64 TEIEILKKLNHPCIIKI-KNFFDAEDYYI--VLELMEGGELFDKVVGNKRLKEATCKLYF 120
Query: 187 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGE--VKIGDLGLA-IAMQQPTARSVIG 243
Q+L + YLH + IIHRDLK +N+ ++ + +KI D G + I + R++ G
Sbjct: 121 YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 178
Query: 244 TPEFMAPELY----EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG--- 296
TP ++APE+ YN VD +S G+ + ++ P+SE + + ++TSG
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 238
Query: 297 IKPASLAKVNDPQIKGFIEKCLVPASERLSAKDLLKDPFLQVENQKEPICDPL 349
P A+V++ + + +V R + ++ L+ P+LQ E+ K D L
Sbjct: 239 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLL 291
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 15/233 (6%)
Query: 127 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWA 186
+E+ +LK L ++K K++ D + + + EL G L +K + K +
Sbjct: 64 TEIEILKKLNHPCIIKI-KNFFDAEDYYI--VLELMEGGELFDKVVGNKRLKEATCKLYF 120
Query: 187 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGE--VKIGDLGLA-IAMQQPTARSVIG 243
Q+L + YLH + IIHRDLK +N+ ++ + +KI D G + I + R++ G
Sbjct: 121 YQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 178
Query: 244 TPEFMAPELY----EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG--- 296
TP ++APE+ YN VD +S G+ + ++ P+SE + + ++TSG
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 238
Query: 297 IKPASLAKVNDPQIKGFIEKCLVPASERLSAKDLLKDPFLQVENQKEPICDPL 349
P A+V++ + + +V R + ++ L+ P+LQ E+ K D L
Sbjct: 239 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLL 291
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 110
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 111 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 168
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 169 --IIHRDLKPSNLAVNED-CELKILDFGLA-RHTDDEMXGYVATRWYRAPEIMLNWMHYN 224
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 225 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 283
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 84
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 85 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 142
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 143 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 198
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 199 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 257
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 151
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 152 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 207
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 208 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 266
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 103/205 (50%), Gaps = 21/205 (10%)
Query: 83 EVLGKGAFKTVYKAF----DEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDD 138
+VLG GAF TVYK E I VA +KI + P + E ++ S+
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVA---IKILNETTGPKANVEFMDEALIMASMDHP 77
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLVYLH 197
++V+ + T+ ++T+L G L +Y +HK N+ +++ NW QI G++YL
Sbjct: 78 HLVRLLGVCLS---PTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE 134
Query: 198 SHNPPIIHRDLKCDNIFVNG-NHGEVKIGDLGLAIAMQ----QPTARSVIGTPEFMAPE- 251
++HRDL N+ V NH VKI D GLA ++ + A ++MA E
Sbjct: 135 ERR--LVHRDLAARNVLVKSPNH--VKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 190
Query: 252 LYEEEYNELVDIYSFGMCILEMVTF 276
++ ++ D++S+G+ I E++TF
Sbjct: 191 IHYRKFTHQSDVWSYGVTIWELMTF 215
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 110/215 (51%), Gaps = 9/215 (4%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
LG G+F V+ G A +K + V++L ++ E +L + +++
Sbjct: 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRL-KQVEHTNDERLMLSIVTHPFIIR 70
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPP 202
+ ++ D ++ + MI + G L +K + V K +A ++ L YLHS +
Sbjct: 71 MWGTFQDAQQ--IFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD-- 126
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEEE-YNELV 261
II+RDLK +NI ++ N G +KI D G A + T + GTP+++APE+ + YN+ +
Sbjct: 127 IIYRDLKPENILLDKN-GHIKITDFGFAKYVPDVTY-XLCGTPDYIAPEVVSTKPYNKSI 184
Query: 262 DIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
D +SFG+ I EM+ P+ + N + ++K+ +
Sbjct: 185 DWWSFGILIYEMLAGYTPFYDS-NTMKTYEKILNA 218
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 106/211 (50%), Gaps = 8/211 (3%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 13 LGKGKFGNVYLAREKQRKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 71
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 72 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 127
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYE-EEYNELVDI 263
HRD+K +N+ + G+ GE+KI D G ++ ++ GT +++ PE+ E ++E VD+
Sbjct: 128 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 186
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+S G+ E + + P+ E + +K+++
Sbjct: 187 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 216
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 106/211 (50%), Gaps = 8/211 (3%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ + +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 78 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 133
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYE-EEYNELVDI 263
HRD+K +N+ + G+ GE+KI D G ++ + GT +++ PE+ E ++E VD+
Sbjct: 134 HRDIKPENLLL-GSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDL 192
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+S G+ E + + P+ E + +K+++
Sbjct: 193 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 222
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 127/269 (47%), Gaps = 18/269 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHL-LKSLKDDNVVKF 143
LG+GA+ V K +G +A R++ Q + ++L ++ + ++++ V F
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ---EQKRLLMDLDISMRTVDCPFTVTF 115
Query: 144 YKSWVDDKKKTVNMITELFTSGNLRQYRK---KHKNVDIKVIKNWARQILHGLVYLHSHN 200
Y + ++ V + EL + + Y++ K + + ++ A I+ L +LHS
Sbjct: 116 YGALF--REGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS-K 172
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIG------TPEFMAPELYE 254
+IHRD+K N+ +N G+VK+ D G++ + A+++ PE + PEL +
Sbjct: 173 LSVIHRDVKPSNVLINA-LGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQ 231
Query: 255 EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFI 314
+ Y+ DI+S G+ ++E+ +PY P Q K+V P A + F
Sbjct: 232 KGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFT 291
Query: 315 EKCLVPAS-ERLSAKDLLKDPFLQVENQK 342
+CL S ER + +L++ PF + K
Sbjct: 292 SQCLKKNSKERPTYPELMQHPFFTLHESK 320
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 145
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 146 --IIHRDLKPSNLAVNED-CELKILDAGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 201
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 99/197 (50%), Gaps = 11/197 (5%)
Query: 85 LGKGAFKTVYKAFD-EFAGIEVAWSRVKIDDVLQ-LPGDLQKLYSEVHLLKSLKDDNVVK 142
+G+GA+ V+KA D + G VA RV++ + +P + + + L++ + NVV+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 143 FYKSWVDDKKKTVNMITELF--TSGNLRQYRKK--HKNVDIKVIKNWARQILHGLVYLHS 198
+ + +T +F +L Y K V + IK+ Q+L GL +LHS
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 199 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-IAMQQPTARSVIGTPEFMAPE-LYEEE 256
H ++HRDLK NI V + G++K+ D GLA I Q SV+ T + APE L +
Sbjct: 139 HR--VVHRDLKPQNILVTSS-GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS 195
Query: 257 YNELVDIYSFGMCILEM 273
Y VD++S G EM
Sbjct: 196 YATPVDLWSVGCIFAEM 212
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 107/211 (50%), Gaps = 8/211 (3%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ + +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 18 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 76
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 77 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 132
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYE-EEYNELVDI 263
HRD+K +N+ + G+ GE+KI + G ++ ++ GT +++ PE+ E ++E VD+
Sbjct: 133 HRDIKPENLLL-GSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 191
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+S G+ E + + P+ E + +K+++
Sbjct: 192 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 221
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 106/211 (50%), Gaps = 8/211 (3%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ + +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 17 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 75
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 76 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 131
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEEE-YNELVDI 263
HRD+K +N+ + G+ GE+KI D G + ++ GT +++ PE+ E ++E VD+
Sbjct: 132 HRDIKPENLLL-GSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDL 190
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+S G+ E + + P+ E + +K+++
Sbjct: 191 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 220
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 17/209 (8%)
Query: 77 RYVRYDEVLGKGAFKTV----YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLL 132
RY++ LG+G F V Y ++ G VA +K D Q ++ E+ +L
Sbjct: 14 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQ---EIDIL 70
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHG 192
++L ++++K+ D +K++ ++ E G+LR Y +H ++ + + +A+QI G
Sbjct: 71 RTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEG 129
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP----TARSVIGTPEF- 247
+ YLH+ + IHR+L N+ ++ N VKIGD GLA A+ + R +P F
Sbjct: 130 MAYLHAQH--YIHRNLAARNVLLD-NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 186
Query: 248 MAPE-LYEEEYNELVDIYSFGMCILEMVT 275
APE L E ++ D++SFG+ + E++T
Sbjct: 187 YAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 17/209 (8%)
Query: 77 RYVRYDEVLGKGAFKTV----YKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLL 132
RY++ LG+G F V Y ++ G VA +K D P E+ +L
Sbjct: 31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAG---PQHRSGWKQEIDIL 87
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHG 192
++L ++++K+ D ++ ++ E G+LR Y +H ++ + + +A+QI G
Sbjct: 88 RTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEG 146
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEF- 247
+ YLH+ + IHRDL N+ ++ N VKIGD GLA A+ + R +P F
Sbjct: 147 MAYLHAQH--YIHRDLAARNVLLD-NDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFW 203
Query: 248 MAPE-LYEEEYNELVDIYSFGMCILEMVT 275
APE L E ++ D++SFG+ + E++T
Sbjct: 204 YAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 139/312 (44%), Gaps = 45/312 (14%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 108 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 165
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 166 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 221
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSE-----------CKNP-AQIFKKVTSGIKP----- 299
+ VDI+S G + E++T +P ++ P A++ KK++S
Sbjct: 222 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 281
Query: 300 -ASLAKVN--------DPQIKGFIEKCLVPASER--LSAKDLLKDPFLQVEN-QKEPICD 347
A + K+N +P +EK LV S++ +A+ L F Q + EP+ D
Sbjct: 282 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 341
Query: 348 PLKLPIQSLKML 359
P +S +L
Sbjct: 342 PYDQSFESRDLL 353
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 139/312 (44%), Gaps = 45/312 (14%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 106
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 107 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 164
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 165 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 220
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSE-----------CKNP-AQIFKKVTSGIKP----- 299
+ VDI+S G + E++T +P ++ P A++ KK++S
Sbjct: 221 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 280
Query: 300 -ASLAKVN--------DPQIKGFIEKCLVPASER--LSAKDLLKDPFLQVEN-QKEPICD 347
A + K+N +P +EK LV S++ +A+ L F Q + EP+ D
Sbjct: 281 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 340
Query: 348 PLKLPIQSLKML 359
P +S +L
Sbjct: 341 PYDQSFESRDLL 352
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 113/226 (50%), Gaps = 17/226 (7%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK-- 142
+G GA+ +V ++D +G+++A K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 116
Query: 143 --FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
F + ++ V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 117 DVFTPATSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 174
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 175 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 230
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASL 302
VDI+S G + E++T +P ++ N Q ++T G PAS+
Sbjct: 231 MTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLT-GTPPASV 275
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 139/312 (44%), Gaps = 45/312 (14%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 108 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 165
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 166 --IIHRDLKPSNLAVNED-CELKILDFGLA-RHTDDEMXGXVATRWYRAPEIMLNWMHYN 221
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSE-----------CKNP-AQIFKKVTSGIKP----- 299
+ VDI+S G + E++T +P ++ P A++ KK++S
Sbjct: 222 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 281
Query: 300 -ASLAKVN--------DPQIKGFIEKCLVPASER--LSAKDLLKDPFLQVEN-QKEPICD 347
A + K+N +P +EK LV S++ +A+ L F Q + EP+ D
Sbjct: 282 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 341
Query: 348 PLKLPIQSLKML 359
P +S +L
Sbjct: 342 PYDQSFESRDLL 353
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 107/211 (50%), Gaps = 8/211 (3%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ + +A +V L+ G +L EV + L+ N+++ Y
Sbjct: 19 LGKGKFGNVYLAREKQSKFILAL-KVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D + V +I E G + + +K D + + ++ + L Y HS +I
Sbjct: 78 GYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VI 133
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYE-EEYNELVDI 263
HRD+K +N+ + G+ GE+KI + G ++ ++ GT +++ PE+ E ++E VD+
Sbjct: 134 HRDIKPENLLL-GSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 192
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
+S G+ E + + P+ E + +K+++
Sbjct: 193 WSLGVLCYEFLVGKPPF-EANTYQETYKRIS 222
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 145
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 146 --IIHRDLKPSNLAVNED-CELKILDYGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 201
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 139/312 (44%), Gaps = 45/312 (14%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 145
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 146 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 201
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSE-----------CKNP-AQIFKKVTSGIKP----- 299
+ VDI+S G + E++T +P ++ P A++ KK++S
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 300 -ASLAKVN--------DPQIKGFIEKCLVPASER--LSAKDLLKDPFLQVEN-QKEPICD 347
A + K+N +P +EK LV S++ +A+ L F Q + EP+ D
Sbjct: 262 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 321
Query: 348 PLKLPIQSLKML 359
P +S +L
Sbjct: 322 PYDQSFESRDLL 333
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 99/197 (50%), Gaps = 11/197 (5%)
Query: 85 LGKGAFKTVYKAFD-EFAGIEVAWSRVKIDDVLQ-LPGDLQKLYSEVHLLKSLKDDNVVK 142
+G+GA+ V+KA D + G VA RV++ + +P + + + L++ + NVV+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 143 FYKSWVDDKKKTVNMITELF--TSGNLRQYRKK--HKNVDIKVIKNWARQILHGLVYLHS 198
+ + +T +F +L Y K V + IK+ Q+L GL +LHS
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 199 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-IAMQQPTARSVIGTPEFMAPE-LYEEE 256
H ++HRDLK NI V + G++K+ D GLA I Q SV+ T + APE L +
Sbjct: 139 HR--VVHRDLKPQNILVTSS-GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS 195
Query: 257 YNELVDIYSFGMCILEM 273
Y VD++S G EM
Sbjct: 196 YATPVDLWSVGCIFAEM 212
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 145
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 146 --IIHRDLKPSNLAVNED-CELKILDRGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 201
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 139/312 (44%), Gaps = 45/312 (14%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 97
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 98 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 155
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 156 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 211
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSE-----------CKNP-AQIFKKVTSGIKP----- 299
+ VDI+S G + E++T +P ++ P A++ KK++S
Sbjct: 212 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 271
Query: 300 -ASLAKVN--------DPQIKGFIEKCLVPASER--LSAKDLLKDPFLQVEN-QKEPICD 347
A + K+N +P +EK LV S++ +A+ L F Q + EP+ D
Sbjct: 272 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 331
Query: 348 PLKLPIQSLKML 359
P +S +L
Sbjct: 332 PYDQSFESRDLL 343
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 15/203 (7%)
Query: 78 YVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKD 137
Y++ D+ LG+G + TVYK + VA ++++ P + EV LLK LK
Sbjct: 4 YIKLDK-LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR---EVSLLKDLKH 59
Query: 138 DNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV-DIKVIKNWARQILHGLVYL 196
N+V + + +K++ ++ E + +L+QY N+ ++ +K + Q+L GL Y
Sbjct: 60 ANIVTLHD--IIHTEKSLTLVFE-YLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYC 116
Query: 197 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR--SVIGTPEFMAPE--L 252
H ++HRDLK N+ +N GE+K+ D GLA A PT + + T + P+ L
Sbjct: 117 HRQK--VLHRDLKPQNLLIN-ERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILL 173
Query: 253 YEEEYNELVDIYSFGMCILEMVT 275
+Y+ +D++ G EM T
Sbjct: 174 GSTDYSTQIDMWGVGCIFYEMAT 196
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 14/220 (6%)
Query: 69 FVEKDPSGRYVRYD-EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYS 127
++E P G D VLG+G F V+ + G A ++ + + G Q
Sbjct: 176 WLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKG-YQGAMV 234
Query: 128 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ--YRKKHKNVDIKVIKN- 184
E +L + +V ++ + K + ++ + G++R Y N + +
Sbjct: 235 EKKILAKVHSRFIVSL--AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI 292
Query: 185 -WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ--QPTARSV 241
+ QI+ GL +LH N II+RDLK +N+ ++ + G V+I DLGLA+ ++ Q +
Sbjct: 293 FYTAQIVSGLEHLHQRN--IIYRDLKPENVLLD-DDGNVRISDLGLAVELKAGQTKTKGY 349
Query: 242 IGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPY 280
GTP FMAPE L EEY+ VD ++ G+ + EM+ P+
Sbjct: 350 AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 14/220 (6%)
Query: 69 FVEKDPSGRYVRYD-EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYS 127
++E P G D VLG+G F V+ + G A ++ + + G Q
Sbjct: 176 WLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKG-YQGAMV 234
Query: 128 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ--YRKKHKNVDIKVIKN- 184
E +L + +V ++ + K + ++ + G++R Y N + +
Sbjct: 235 EKKILAKVHSRFIVSL--AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI 292
Query: 185 -WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ--QPTARSV 241
+ QI+ GL +LH N II+RDLK +N+ ++ + G V+I DLGLA+ ++ Q +
Sbjct: 293 FYTAQIVSGLEHLHQRN--IIYRDLKPENVLLD-DDGNVRISDLGLAVELKAGQTKTKGY 349
Query: 242 IGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPY 280
GTP FMAPE L EEY+ VD ++ G+ + EM+ P+
Sbjct: 350 AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 14/220 (6%)
Query: 69 FVEKDPSGRYVRYD-EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYS 127
++E P G D VLG+G F V+ + G A ++ + + G Q
Sbjct: 176 WLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKG-YQGAMV 234
Query: 128 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ--YRKKHKNVDIKVIKN- 184
E +L + +V ++ + K + ++ + G++R Y N + +
Sbjct: 235 EKKILAKVHSRFIVSL--AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI 292
Query: 185 -WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ--QPTARSV 241
+ QI+ GL +LH N II+RDLK +N+ ++ + G V+I DLGLA+ ++ Q +
Sbjct: 293 FYTAQIVSGLEHLHQRN--IIYRDLKPENVLLD-DDGNVRISDLGLAVELKAGQTKTKGY 349
Query: 242 IGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPY 280
GTP FMAPE L EEY+ VD ++ G+ + EM+ P+
Sbjct: 350 AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 14/220 (6%)
Query: 69 FVEKDPSGRYVRYD-EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYS 127
++E P G D VLG+G F V+ + G A ++ + + G Q
Sbjct: 176 WLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKG-YQGAMV 234
Query: 128 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQ--YRKKHKNVDIKVIKN- 184
E +L + +V ++ + K + ++ + G++R Y N + +
Sbjct: 235 EKKILAKVHSRFIVSL--AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI 292
Query: 185 -WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ--QPTARSV 241
+ QI+ GL +LH N II+RDLK +N+ ++ + G V+I DLGLA+ ++ Q +
Sbjct: 293 FYTAQIVSGLEHLHQRN--IIYRDLKPENVLLD-DDGNVRISDLGLAVELKAGQTKTKGY 349
Query: 242 IGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPY 280
GTP FMAPE L EEY+ VD ++ G+ + EM+ P+
Sbjct: 350 AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 139/312 (44%), Gaps = 45/312 (14%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 151
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 152 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 207
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNP------------AQIFKKVTSGIKP----- 299
+ VDI+S G + E++T +P ++ + A++ KK++S
Sbjct: 208 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 267
Query: 300 -ASLAKVN--------DPQIKGFIEKCLVPASER--LSAKDLLKDPFLQVEN-QKEPICD 347
A + K+N +P +EK LV S++ +A+ L F Q + EP+ D
Sbjct: 268 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 327
Query: 348 PLKLPIQSLKML 359
P +S +L
Sbjct: 328 PYDQSFESRDLL 339
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 99/197 (50%), Gaps = 11/197 (5%)
Query: 85 LGKGAFKTVYKAFD-EFAGIEVAWSRVKIDDVLQ-LPGDLQKLYSEVHLLKSLKDDNVVK 142
+G+GA+ V+KA D + G VA RV++ + +P + + + L++ + NVV+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 143 FYKSWVDDKKKTVNMITELF--TSGNLRQYRKK--HKNVDIKVIKNWARQILHGLVYLHS 198
+ + +T +F +L Y K V + IK+ Q+L GL +LHS
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 199 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-IAMQQPTARSVIGTPEFMAPE-LYEEE 256
H ++HRDLK NI V + G++K+ D GLA I Q SV+ T + APE L +
Sbjct: 139 HR--VVHRDLKPQNILVTSS-GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS 195
Query: 257 YNELVDIYSFGMCILEM 273
Y VD++S G EM
Sbjct: 196 YATPVDLWSVGCIFAEM 212
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 107/228 (46%), Gaps = 17/228 (7%)
Query: 76 GRYVRYDEVLGKGAFKTVYKAFDEFAGIEVA---WSRVKIDDVLQLPGDLQKLYSEVHLL 132
G YV D LG G F V + G +VA +R KI L + G +++ E+ L
Sbjct: 11 GHYVLGD-TLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRS-LDVVGKIKR---EIQNL 65
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHG 192
K + +++K Y+ V M+ E + G L Y KH V+ + +QIL
Sbjct: 66 KLFRHPHIIKLYQ--VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSA 123
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT-ARSVIGTPEFMAPE 251
+ Y H H ++HRDLK +N+ ++ H KI D GL+ M R+ G+P + APE
Sbjct: 124 VDYCHRHM--VVHRDLKPENVLLDA-HMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPE 180
Query: 252 LYEEEY--NELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGI 297
+ VDI+S G+ + ++ P+ + P +FKK+ G+
Sbjct: 181 VISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT-LFKKIRGGV 227
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 119/240 (49%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K PS + D+ LG G+F V + +G A + V++
Sbjct: 22 AKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 82 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 196 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 139/312 (44%), Gaps = 45/312 (14%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 141
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 142 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 197
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSE-----------CKNP-AQIFKKVTSGIKP----- 299
+ VDI+S G + E++T +P ++ P A++ KK++S
Sbjct: 198 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 257
Query: 300 -ASLAKVN--------DPQIKGFIEKCLVPASER--LSAKDLLKDPFLQVEN-QKEPICD 347
A + K+N +P +EK LV S++ +A+ L F Q + EP+ D
Sbjct: 258 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 317
Query: 348 PLKLPIQSLKML 359
P +S +L
Sbjct: 318 PYDQSFESRDLL 329
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 119/240 (49%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K PS + D+ LG G+F V + +G A + V++
Sbjct: 23 AKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK 82
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 83 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRF 139
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 196
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 197 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 145
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 146 --IIHRDLKPSNLAVNED-CELKILDGGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 201
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 105/202 (51%), Gaps = 10/202 (4%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWS-RVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV 141
++LGKG+F V+ A EF ++ + DV+ + D++ E +L SL ++
Sbjct: 23 KMLGKGSFGKVFLA--EFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVL-SLAWEHPF 79
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
+ K+ + + E G+L + + D+ +A +I+ GL +LHS
Sbjct: 80 LTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG- 138
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS--VIGTPEFMAPE-LYEEEYN 258
I++RDLK DNI ++ + G +KI D G+ A++ GTP+++APE L ++YN
Sbjct: 139 -IVYRDLKLDNILLDKD-GHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYN 196
Query: 259 ELVDIYSFGMCILEMVTFEYPY 280
VD +SFG+ + EM+ + P+
Sbjct: 197 HSVDWWSFGVLLYEMLIGQSPF 218
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 119/240 (49%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K PS + D+ LG G+F V + +G A + V++
Sbjct: 22 AKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 82 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 196 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 105/202 (51%), Gaps = 10/202 (4%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWS-RVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV 141
++LGKG+F V+ A EF ++ + DV+ + D++ E +L SL ++
Sbjct: 24 KMLGKGSFGKVFLA--EFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVL-SLAWEHPF 80
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
+ K+ + + E G+L + + D+ +A +I+ GL +LHS
Sbjct: 81 LTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG- 139
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS--VIGTPEFMAPE-LYEEEYN 258
I++RDLK DNI ++ + G +KI D G+ A++ GTP+++APE L ++YN
Sbjct: 140 -IVYRDLKLDNILLDKD-GHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYN 197
Query: 259 ELVDIYSFGMCILEMVTFEYPY 280
VD +SFG+ + EM+ + P+
Sbjct: 198 HSVDWWSFGVLLYEMLIGQSPF 219
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 119/240 (49%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K PS + D+ LG G+F V + +G A + V++
Sbjct: 43 AKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK 102
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 103 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRF 159
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 160 XEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 216
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 217 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 274
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 119/240 (49%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K PS + D+ LG G+F V + +G A + V++
Sbjct: 22 AKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 82 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 196 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 119/240 (49%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K PS + D+ LG G+F V + +G A + V++
Sbjct: 22 AKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 82 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 196 W-XLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 119/240 (49%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K +P+ D+ LG G+F V G A + V++
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L +++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 82 LK-EIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYAPGGEMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +K+ D GLA ++ T
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGLAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 196 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 119/240 (49%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K PS + D+ LG G+F V + +G A + V++
Sbjct: 22 AKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 82 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 196 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 119/240 (49%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K PS + D+ LG G+F V + +G A + V++
Sbjct: 22 AKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 82 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 196 W-XLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 119/240 (49%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K PS + D+ LG G+F V + +G A + V++
Sbjct: 22 AKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 82 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLIID-QQGYIQVTDFGFAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 196 W-XLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 139/312 (44%), Gaps = 45/312 (14%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCAKLTDDHV-QFLIYQILRGLKYIHSAD 141
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D GLA + T + APE+ YN
Sbjct: 142 --IIHRDLKPSNLAVNED-CELKILDFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 197
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSE-----------CKNP-AQIFKKVTSGIKP----- 299
+ VDI+S G + E++T +P ++ P A++ KK++S
Sbjct: 198 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 257
Query: 300 -ASLAKVN--------DPQIKGFIEKCLVPASER--LSAKDLLKDPFLQVEN-QKEPICD 347
A + K+N +P +EK LV S++ +A+ L F Q + EP+ D
Sbjct: 258 LAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD 317
Query: 348 PLKLPIQSLKML 359
P +S +L
Sbjct: 318 PYDQSFESRDLL 329
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 119/240 (49%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K PS + D+ LG G+F V + +G A + V++
Sbjct: 22 AKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 82 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 196 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADEPIQIYEKIVSG 253
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 119/240 (49%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K PS + D+ LG G+F V + +G A + V++
Sbjct: 22 AKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 82 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 139 XEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 196 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 126/269 (46%), Gaps = 18/269 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHL-LKSLKDDNVVKF 143
LG+GA+ V K +G +A R++ Q + ++L ++ + ++++ V F
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ---EQKRLLMDLDISMRTVDCPFTVTF 71
Query: 144 YKSWVDDKKKTVNMITELFTSGNLRQYRK---KHKNVDIKVIKNWARQILHGLVYLHSHN 200
Y + ++ V + EL + + Y++ K + + ++ A I+ L +LHS
Sbjct: 72 YGALF--REGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS-K 128
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIG------TPEFMAPELYE 254
+IHRD+K N+ +N G+VK+ D G++ + A+ + PE + PEL +
Sbjct: 129 LSVIHRDVKPSNVLINA-LGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQ 187
Query: 255 EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFI 314
+ Y+ DI+S G+ ++E+ +PY P Q K+V P A + F
Sbjct: 188 KGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFT 247
Query: 315 EKCLVPAS-ERLSAKDLLKDPFLQVENQK 342
+CL S ER + +L++ PF + K
Sbjct: 248 SQCLKKNSKERPTYPELMQHPFFTLHESK 276
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 119/240 (49%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K PS + D+ LG G+F V + +G A + V++
Sbjct: 22 AKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 82 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 139 XEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 196 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 119/240 (49%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K PS + D+ LG G+F V + +G A + V++
Sbjct: 9 AKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK 68
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 69 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRF 125
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 126 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-EQGYIQVTDFGFAKRVKGRT 182
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 183 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 240
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 119/240 (49%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K PS + D+ LG G+F V + +G A + V++
Sbjct: 17 AKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK 76
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 77 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRF 133
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 134 XEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 190
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 191 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 248
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 106/228 (46%), Gaps = 17/228 (7%)
Query: 76 GRYVRYDEVLGKGAFKTVYKAFDEFAGIEVA---WSRVKIDDVLQLPGDLQKLYSEVHLL 132
G YV D LG G F V + G +VA +R KI L + G +++ E+ L
Sbjct: 11 GHYVLGD-TLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRS-LDVVGKIKR---EIQNL 65
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHG 192
K + +++K Y+ V M+ E + G L Y KH V+ + +QIL
Sbjct: 66 KLFRHPHIIKLYQ--VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSA 123
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT-ARSVIGTPEFMAPE 251
+ Y H H ++HRDLK +N+ ++ H KI D GL+ M R G+P + APE
Sbjct: 124 VDYCHRHM--VVHRDLKPENVLLDA-HMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPE 180
Query: 252 LYEEEY--NELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGI 297
+ VDI+S G+ + ++ P+ + P +FKK+ G+
Sbjct: 181 VISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT-LFKKIRGGV 227
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 119/240 (49%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K PS + D+ LG G+F V + +G A + V++
Sbjct: 22 AKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 82 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 139 XEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 196 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 119/240 (49%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K PS + D+ LG G+F V + +G A + V++
Sbjct: 22 AKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 82 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 139 AEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 196 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 118/240 (49%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K +P+ D+ +G G+F V G A + V++
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G++ + ++
Sbjct: 82 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYMPGGDMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +K+ D G A ++ T
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIKVADFGFAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 196 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 118/240 (49%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K +P+ D+ +G G+F V G A + V++
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G++ + ++
Sbjct: 82 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYMPGGDMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +K+ D G A ++ T
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIKVADFGFAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 196 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 112/239 (46%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G+ VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 145
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI GLA + T + APE+ YN
Sbjct: 146 --IIHRDLKPSNLAVNED-CELKILGFGLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 201
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 118/240 (49%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K +P+ D+ LG G+F V + G A + V++
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 82 LK-QIEHTLNEKRILQAVNFPFLVKLEYSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 196 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 118/240 (49%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K +P+ D+ LG G+F V + G A + V++
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 82 LK-QIEHTLNEKRILQAVNFPFLVKLEYSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 196 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 118/240 (49%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K +P+ D+ LG G+F V + G A + V++
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 82 LK-QIEHTLNEKRILQAVNFPFLVKLEYSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 196 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 119/240 (49%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K PS + D+ LG G+F V + +G A + V++
Sbjct: 22 AKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 82 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I +M YP P QI++K+ SG
Sbjct: 196 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 15/257 (5%)
Query: 80 RYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDN 139
++ ++LG+G+F TV A + E A ++ +++ + + E ++ L
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHPF 93
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGL--SYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELY-E 254
IIHRDLK +NI +N + ++I D G A + +Q A S +GT ++++PEL E
Sbjct: 152 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 208
Query: 255 EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFI 314
+ ++ D+++ G I ++V P+ N IF+K+ + P+ + +
Sbjct: 209 KSASKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDFPEKFFPKARDLV 265
Query: 315 EKCLV-PASERLSAKDL 330
EK LV A++RL +++
Sbjct: 266 EKLLVLDATKRLGCEEM 282
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 129/262 (49%), Gaps = 25/262 (9%)
Query: 80 RYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDN 139
++ ++LG+G+F TV A + E A ++ +++ + + E ++ L
Sbjct: 38 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHPF 96
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 97 FVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELYEE 255
IIHRDLK +NI +N + ++I D G A + +Q A +GT ++++PEL E
Sbjct: 155 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 211
Query: 256 EYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIK-----PASLAKVNDPQ 309
+ + D+++ G I ++V P+ N IF+K+ IK PA+ P+
Sbjct: 212 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKI---IKLEYDFPAAFF----PK 263
Query: 310 IKGFIEKCLV-PASERLSAKDL 330
+ +EK LV A++RL +++
Sbjct: 264 ARDLVEKLLVLDATKRLGCEEM 285
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 15/257 (5%)
Query: 80 RYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDN 139
++ ++LG+G+F TV A + E A ++ +++ + + E ++ L
Sbjct: 36 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHPF 94
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 95 FVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELYEE 255
IIHRDLK +NI +N + ++I D G A + +Q A S +GT ++++PEL E
Sbjct: 153 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 209
Query: 256 EYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFI 314
+ + D+++ G I ++V P+ N IF+K+ + P+ + +
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDFPEKFFPKARDLV 266
Query: 315 EKCLV-PASERLSAKDL 330
EK LV A++RL +++
Sbjct: 267 EKLLVLDATKRLGCEEM 283
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 119/240 (49%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K +P+ D+ LG G+F V G A + V++
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L +++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 82 LK-EIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYAPGGEMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D GLA ++ T
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIQVTDFGLAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 196 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 114/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK-- 142
+G GA+ +V A+D +VA K+ Q ++ Y E+ LLK LK +NV+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVK--KLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 143 --FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
F + + V ++T L +L K D + ++ Q+L GL Y+HS
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLM-GADLNNIVKSQALSD-EHVQFLVYQLLRGLKYIHSAG 151
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E++I D GLA + + T + APE+ YN
Sbjct: 152 --IIHRDLKPSNVAVNED-SELRILDFGLARQADEEMT-GYVATRWYRAPEIMLNWMHYN 207
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++ + +P S+ + + +V P LAK++ + +I+
Sbjct: 208 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ 266
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 100/198 (50%), Gaps = 14/198 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA D I VA R+++D + G E+ LLK L N+V
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRI-VALKRIRLD--AEDEGIPSTAIREISLLKELHHPNIVS 83
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKN-VDIKVIKNWARQILHGLVYLHSHNP 201
V ++ + ++ E F +L++ ++K + IK + Q+L G+ + H H
Sbjct: 84 LID--VIHSERCLTLVFE-FMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR- 139
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV--IGTPEFMAPELY--EEEY 257
I+HRDLK N+ +N + G +K+ D GLA A P + T + AP++ ++Y
Sbjct: 140 -ILHRDLKPQNLLINSD-GALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKY 197
Query: 258 NELVDIYSFGMCILEMVT 275
+ VDI+S G EM+T
Sbjct: 198 STSVDIWSIGCIFAEMIT 215
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 100/198 (50%), Gaps = 14/198 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA D I VA R+++D + G E+ LLK L N+V
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRI-VALKRIRLDA--EDEGIPSTAIREISLLKELHHPNIVS 83
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKN-VDIKVIKNWARQILHGLVYLHSHNP 201
V ++ + ++ E F +L++ ++K + IK + Q+L G+ + H H
Sbjct: 84 LID--VIHSERCLTLVFE-FMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR- 139
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV--IGTPEFMAPELY--EEEY 257
I+HRDLK N+ +N + G +K+ D GLA A P + T + AP++ ++Y
Sbjct: 140 -ILHRDLKPQNLLINSD-GALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKY 197
Query: 258 NELVDIYSFGMCILEMVT 275
+ VDI+S G EM+T
Sbjct: 198 STSVDIWSIGCIFAEMIT 215
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 117/240 (48%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K P+ D+ LG G+F V + G A + V++
Sbjct: 23 AKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVK 82
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 83 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYAPGGEMFSHLRRIGRF 139
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +K+ D G A ++ T
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGFAKRVKGRT 196
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 197 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 117/240 (48%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K +P+ D+ +G G+F V G A + V++
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 82 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +K+ D G A ++ T
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIKVADFGFAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 196 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 118/240 (49%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K +P+ D+ LG G+F V G A + V++
Sbjct: 23 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 82
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 83 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRF 139
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 196
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
++ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 197 W-TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 111/221 (50%), Gaps = 25/221 (11%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA + + G A +++++ + G E+ +LK LK N+VK
Sbjct: 8 EKIGEGTYGVVYKAQNNY-GETFALKKIRLEK--EDEGIPSTTIREISILKELKHSNIVK 64
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV-----DIKVIKNWARQILHGLVYLH 197
Y V KK + ++ E +L Q KK +V + K++ Q+L+G+ Y H
Sbjct: 65 LYD--VIHTKKRLVLVFE-----HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV--IGTPEFMAPELY-- 253
++HRDLK N+ +N GE+KI D GLA A P + I T + AP++
Sbjct: 118 DRR--VLHRDLKPQNLLIN-REGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMG 174
Query: 254 EEEYNELVDIYSFGMCILEMV--TFEYP-YSECKNPAQIFK 291
++Y+ +DI+S G EMV T +P SE +IF+
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFR 215
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 117/240 (48%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K P+ D+ LG G+F V + G A + V++
Sbjct: 43 AKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVK 102
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 103 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRF 159
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 160 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 216
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 217 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 274
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 104/204 (50%), Gaps = 14/204 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG GAF V+ + +G+E + D Q+P ++++ +E+ +LKSL N++K +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTIN-KDRSQVP--MEQIEAEIEVLKSLDHPNIIKIF 86
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQY----RKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + D + ++ E G L + + + K + + +Q+++ L Y HS +
Sbjct: 87 EVFED--YHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH 144
Query: 201 PPIIHRDLKCDNIFVNGN--HGEVKIGDLGLA-IAMQQPTARSVIGTPEFMAPELYEEEY 257
++H+DLK +NI H +KI D GLA + + + GT +MAPE+++ +
Sbjct: 145 --VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDV 202
Query: 258 NELVDIYSFGMCILEMVTFEYPYS 281
DI+S G+ + ++T P++
Sbjct: 203 TFKCDIWSAGVVMYFLLTGCLPFT 226
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 118/240 (49%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K +P+ D+ LG G+F V G A + V++
Sbjct: 8 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 67
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 68 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRF 124
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 125 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 181
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
++ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 182 W-TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 239
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 117/240 (48%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K +P+ D+ LG G+F V G A + V++
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 82 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 196 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 118/240 (49%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K PS + D+ LG G+F V + +G A + V++
Sbjct: 22 AKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 82 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE +APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 196 W-XLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 117/240 (48%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K +P+ D+ LG G+F V G A + V++
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 82 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYAPGGEMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +K+ D G A ++ T
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGFAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 196 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 118/240 (49%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K PS + D+ LG G+F V + +G A + V++
Sbjct: 22 AKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 82 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++AP + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 196 W-XLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 117/240 (48%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K P+ D+ LG G+F V + G A + V++
Sbjct: 23 AKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVK 82
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 83 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRF 139
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 196
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 197 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 128/266 (48%), Gaps = 18/266 (6%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDD 138
V E+LG G F V+K + G+++A +K + D +++ +E+ ++ L
Sbjct: 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM----KDKEEVKNEISVMNQLDHA 146
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNL--RQYRKKHKNVDIKVIKNWARQILHGLVYL 196
N+++ Y ++ + K + ++ E G L R + + ++ I + +QI G+
Sbjct: 147 NLIQLYDAF--ESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTIL-FMKQICEGI--R 201
Query: 197 HSHNPPIIHRDLKCDNIF-VNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELYE 254
H H I+H DLK +NI VN + ++KI D GLA + V GTPEF+APE+
Sbjct: 202 HMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVN 261
Query: 255 EEYNEL-VDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVND--PQIK 311
++ D++S G+ +++ P+ N A+ + + + D + K
Sbjct: 262 YDFVSFPTDMWSVGVIAYMLLSGLSPFL-GDNDAETLNNILACRWDLEDEEFQDISEEAK 320
Query: 312 GFIEKCLVP-ASERLSAKDLLKDPFL 336
FI K L+ S R+SA + LK P+L
Sbjct: 321 EFISKLLIKEKSWRISASEALKHPWL 346
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 117/240 (48%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K P+ D+ LG G+F V + G A + V++
Sbjct: 15 AKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVK 74
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 75 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRF 131
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 132 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 188
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 189 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 246
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 117/240 (48%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K P+ D+ LG G+F V + G A + V++
Sbjct: 23 AKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVK 82
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 83 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRF 139
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 196
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 197 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 117/240 (48%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K P+ D+ LG G+F V + G A + V++
Sbjct: 23 AKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVK 82
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 83 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRF 139
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 196
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 197 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 114/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK-- 142
+G GA+ +V A+D +VA K+ Q ++ Y E+ LLK LK +NV+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVK--KLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 143 --FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
F + + V ++T L +L K D + ++ Q+L GL Y+HS
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLM-GADLNNIVKCQALSD-EHVQFLVYQLLRGLKYIHSAG 151
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E++I D GLA + + T + APE+ YN
Sbjct: 152 --IIHRDLKPSNVAVNED-SELRILDFGLARQADEEMT-GYVATRWYRAPEIMLNWMHYN 207
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++ + +P S+ + + +V P LAK++ + +I+
Sbjct: 208 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ 266
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 117/240 (48%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K +P+ D+ LG G+F V G A + V++
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 82 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYAPGGEMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +K+ D G A ++ T
Sbjct: 139 XEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGFAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 196 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 111/221 (50%), Gaps = 25/221 (11%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA + + G A +++++ + G E+ +LK LK N+VK
Sbjct: 8 EKIGEGTYGVVYKAQNNY-GETFALKKIRLEK--EDEGIPSTTIREISILKELKHSNIVK 64
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV-----DIKVIKNWARQILHGLVYLH 197
Y V KK + ++ E +L Q KK +V + K++ Q+L+G+ Y H
Sbjct: 65 LYD--VIHTKKRLVLVFE-----HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV--IGTPEFMAPELY-- 253
++HRDLK N+ +N GE+KI D GLA A P + + T + AP++
Sbjct: 118 DRR--VLHRDLKPQNLLIN-REGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMG 174
Query: 254 EEEYNELVDIYSFGMCILEMV--TFEYP-YSECKNPAQIFK 291
++Y+ +DI+S G EMV T +P SE +IF+
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFR 215
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 13/229 (5%)
Query: 76 GRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL 135
G+Y+ D +LG+G++ V + D A +K + ++P + E+ LL+ L
Sbjct: 5 GKYLMGD-LLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL 63
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRK-KHKNVDIKVIKNWARQILHGLV 194
+ NV++ +++K+ + M+ E G K + + Q++ GL
Sbjct: 64 RHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLE 123
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ----QPTARSVIGTPEFMAP 250
YLHS I+H+D+K N+ + G +KI LG+A A+ T R+ G+P F P
Sbjct: 124 YLHSQG--IVHKDIKPGNLLLT-TGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPP 180
Query: 251 ELYE--EEYNEL-VDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
E+ + ++ VDI+S G+ + + T YP+ E N ++F+ + G
Sbjct: 181 EIANGLDTFSGFKVDIWSAGVTLYNITTGLYPF-EGDNIYKLFENIGKG 228
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 117/240 (48%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K +P+ D+ LG G+F V G A + V++
Sbjct: 23 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 82
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 83 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRF 139
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 196
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 197 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 117/240 (48%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K P+ D+ LG G+F V + G A + V++
Sbjct: 15 AKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVK 74
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 75 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRF 131
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 132 XEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 188
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 189 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 246
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 15/257 (5%)
Query: 80 RYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDN 139
++ ++LG+G+F TV A + E A ++ +++ + + E ++ L
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHPF 90
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 91 FVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELYEE 255
IIHRDLK +NI +N + ++I D G A + +Q A S +GT ++++PEL E
Sbjct: 149 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 205
Query: 256 EYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFI 314
+ + D+++ G I ++V P+ N IF+K+ + P+ + +
Sbjct: 206 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDFPEKFFPKARDLV 262
Query: 315 EKCLV-PASERLSAKDL 330
EK LV A++RL +++
Sbjct: 263 EKLLVLDATKRLGCEEM 279
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 117/240 (48%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K +P+ D+ LG G+F V G A + V++
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 82 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 196 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 22/201 (10%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E +G+G + VYKA + + G A +++++ + G E+ +LK LK N+VK
Sbjct: 8 EKIGEGTYGVVYKAQNNY-GETFALKKIRLEK--EDEGIPSTTIREISILKELKHSNIVK 64
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV-----DIKVIKNWARQILHGLVYLH 197
Y V KK + ++ E +L Q KK +V + K++ Q+L+G+ Y H
Sbjct: 65 LYD--VIHTKKRLVLVFE-----HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV--IGTPEFMAPELY-- 253
++HRDLK N+ +N GE+KI D GLA A P + + T + AP++
Sbjct: 118 DRR--VLHRDLKPQNLLIN-REGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMG 174
Query: 254 EEEYNELVDIYSFGMCILEMV 274
++Y+ +DI+S G EMV
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMV 195
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 117/240 (48%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K +P+ D+ LG G+F V G A + V++
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 82 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 196 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 117/240 (48%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K +P+ D+ LG G+F V G A + V++
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 82 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 196 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 117/240 (48%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K +P+ D+ LG G+F V G A + V++
Sbjct: 23 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 82
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 83 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRF 139
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 140 XEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 196
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 197 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 126/257 (49%), Gaps = 15/257 (5%)
Query: 80 RYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDN 139
++ ++LG+G+F TV A + E A ++ +++ + + E ++ L
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHPF 91
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 92 FVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELYEE 255
IIHRDLK +NI +N + ++I D G A + +Q A + +GT ++++PEL E
Sbjct: 150 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTE 206
Query: 256 EYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFI 314
+ + D+++ G I ++V P+ N IF+K+ + P+ + +
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDFPEKFFPKARDLV 263
Query: 315 EKCLV-PASERLSAKDL 330
EK LV A++RL +++
Sbjct: 264 EKLLVLDATKRLGCEEM 280
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 114/239 (47%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK-- 142
+G GA+ +V A+D +VA K+ Q ++ Y E+ LLK LK +NV+
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVK--KLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 143 --FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
F + + V ++T L +L K D + ++ Q+L GL Y+HS
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLM-GADLNNIVKCQALSD-EHVQFLVYQLLRGLKYIHSAG 143
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E++I D GLA + + T + APE+ YN
Sbjct: 144 --IIHRDLKPSNVAVNED-CELRILDFGLARQADEEMT-GYVATRWYRAPEIMLNWMHYN 199
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++ + +P S+ + + +V P LAK++ + +I+
Sbjct: 200 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ 258
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 124/257 (48%), Gaps = 15/257 (5%)
Query: 80 RYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDN 139
++ ++LG+G+F TV A + E A ++ +++ + + E ++ L
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHPF 93
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELY-E 254
IIHRDLK +NI +N + ++I D G A + +Q A +GT ++++PEL E
Sbjct: 152 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 255 EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFI 314
+ + D+++ G I ++V P+ N IF K+ + P+ + +
Sbjct: 209 KSAXKSSDLWALGCIIYQLVAGLPPF-RAGNEGLIFAKIIK--LEYDFPEKFFPKARDLV 265
Query: 315 EKCLV-PASERLSAKDL 330
EK LV A++RL +++
Sbjct: 266 EKLLVLDATKRLGCEEM 282
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 111/227 (48%), Gaps = 18/227 (7%)
Query: 58 GTAEPPDADSDFVEKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
G+ E P+ + K+ + ++ VLG GAF TVYK G +V V I ++ +
Sbjct: 1 GSGEAPNQALLRILKETEFKKIK---VLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELRE 56
Query: 118 L--PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 175
P +++ E +++ S+ + +V + + TV +IT+L G L Y ++HK
Sbjct: 57 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHK 113
Query: 176 -NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IA 232
N+ + + NW QI G+ YL ++HRDL N+ V VKI D GLA +
Sbjct: 114 DNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLG 170
Query: 233 MQQPTARSVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 276
++ + G ++MA E + Y D++S+G+ + E++TF
Sbjct: 171 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 217
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 117/240 (48%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K +P+ D+ LG G+F V G A + V++
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 82 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 139 XEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 196 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 117/240 (48%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K +P+ D+ LG G+F V G A + V++
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 82 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYVPGGEMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 139 XEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIQVTDFGFAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 196 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 109/229 (47%), Gaps = 22/229 (9%)
Query: 58 GTAEPPDADSDFVEKDPSGRYVRYDEVLGKGAFKTVYKAF----DEFAGIEVAWSRVKID 113
G+ E P+ + K+ + ++ VLG GAF TVYK E I VA ++
Sbjct: 24 GSGEAPNQALLRILKETEFKKIK---VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 80
Query: 114 DVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK 173
P +++ E +++ S+ + +V + + TV +IT+L G L Y ++
Sbjct: 81 TS---PKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLITQLMPFGCLLDYVRE 134
Query: 174 HK-NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-- 230
HK N+ + + NW QI G+ YL ++HRDL N+ V VKI D GLA
Sbjct: 135 HKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKL 191
Query: 231 IAMQQPTARSVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 276
+ ++ + G ++MA E + Y D++S+G+ + E++TF
Sbjct: 192 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 240
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 83 EVLGKGAFKTVYKAF--DEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNV 140
+VLG GAF TVYK E +++ + +++ + P +++ E +++ S+ + +V
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATS-PKANKEILDEAYVMASVDNPHV 113
Query: 141 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLVYLHSH 199
+ + TV +IT+L G L Y ++HK N+ + + NW QI G+ YL
Sbjct: 114 CRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 170
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP--EFMAPE-LYE 254
++HRDL N+ V VKI D GLA + ++ + G ++MA E +
Sbjct: 171 R--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 227
Query: 255 EEYNELVDIYSFGMCILEMVTF 276
Y D++S+G+ + E++TF
Sbjct: 228 RIYTHQSDVWSYGVTVWELMTF 249
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 110/229 (48%), Gaps = 22/229 (9%)
Query: 60 AEPPDADSDFVEKDPSG-----RYVRYD-EVLGKGAFKTVYKAFDEFAGIEVAWSRVKID 113
+ PP A S F ++ + R V D + +G GA+ V A D G +VA K+
Sbjct: 2 SSPPPARSGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIK--KLY 59
Query: 114 DVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITEL-----FTSGNLR 168
Q ++ Y E+ LLK ++ +NV+ + D+ T++ T+ F +L
Sbjct: 60 RPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDE--TLDDFTDFYLVMPFMGTDLG 117
Query: 169 QYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLG 228
+ KH+ + I+ Q+L GL Y+H+ IIHRDLK N+ VN + E+KI D G
Sbjct: 118 KL-MKHEKLGEDRIQFLVYQMLKGLRYIHAAG--IIHRDLKPGNLAVNED-CELKILDFG 173
Query: 229 LAIAMQQPTARSVIGTPEFMAPE--LYEEEYNELVDIYSFGMCILEMVT 275
LA V+ T + APE L Y + VDI+S G + EM+T
Sbjct: 174 LARQADSEMXGXVV-TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMIT 221
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 124/257 (48%), Gaps = 15/257 (5%)
Query: 80 RYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDN 139
++ ++LG+G+F TV A + E A ++ +++ + + E ++ L
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHPF 93
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELYEE 255
IIHRDLK +NI +N + ++I D G A + +Q A +GT ++++PEL E
Sbjct: 152 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 256 EYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFI 314
+ + D+++ G I ++V P+ N IF K+ + P+ + +
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEGLIFAKIIK--LEYDFPEKFFPKARDLV 265
Query: 315 EKCLV-PASERLSAKDL 330
EK LV A++RL +++
Sbjct: 266 EKLLVLDATKRLGCEEM 282
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 29/210 (13%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E++G G F V+KA G RVK ++ +K EV L L N+V
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN--------EKAEREVKALAKLDHVNIVH 68
Query: 143 FYKSW--------------VDDKKKTVNMITELFTSGNLRQY--RKKHKNVDIKVIKNWA 186
+ W K K + + E G L Q+ +++ + +D +
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELF 128
Query: 187 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR-SVIGTP 245
QI G+ Y+HS +I+RDLK NIF+ + +VKIGD GL +++ R GT
Sbjct: 129 EQITKGVDYIHS--KKLINRDLKPSNIFLV-DTKQVKIGDFGLVTSLKNDGKRXRSKGTL 185
Query: 246 EFMAPE-LYEEEYNELVDIYSFGMCILEMV 274
+M+PE + ++Y + VD+Y+ G+ + E++
Sbjct: 186 RYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 117/240 (48%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K +P+ D+ LG G+F V G A + V++
Sbjct: 22 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 81
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ +VK S+ D+ + M+ E G + + ++
Sbjct: 82 LK-QIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYAPGGEMFSHLRRIGRF 138
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +++ D G A ++ T
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIQVTDFGFAKRVKGRT 195
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 196 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 253
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 125/257 (48%), Gaps = 15/257 (5%)
Query: 80 RYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDN 139
++ ++LG+G+F TV A + E A ++ +++ + + E ++ L
Sbjct: 36 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHPF 94
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 95 FVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELYEE 255
IIHRDLK +NI +N + ++I D G A + +Q A +GT ++++PEL E
Sbjct: 153 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 209
Query: 256 EYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFI 314
+ + D+++ G I ++V P+ N IF+K+ + P+ + +
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDFPEKFFPKARDLV 266
Query: 315 EKCLV-PASERLSAKDL 330
EK LV A++RL +++
Sbjct: 267 EKLLVLDATKRLGCEEM 283
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 17/225 (7%)
Query: 79 VRYDEVLGKGAFKTVYKA-FDEFAG--IEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL 135
+R E LG G+F V + +D +G + VA +K DVL P + EV+ + SL
Sbjct: 20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLK-PDVLSQPEAMDDFIREVNAMHSL 78
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLV 194
N+++ Y + K M+TEL G+L +KH+ + + + +A Q+ G+
Sbjct: 79 DHRNLIRLYGVVLTPPMK---MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 135
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE-----FMA 249
YL S IHRDL N+ + VKIGD GL A+ Q V+ + A
Sbjct: 136 YLESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 192
Query: 250 PE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 293
PE L ++ D + FG+ + EM T+ N +QI K+
Sbjct: 193 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 237
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K P+ D+ LG G+F V + G A + V++
Sbjct: 23 AKEDFLKKWESPAQNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVK 82
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E + +++ +VK S+ D+ + M+ E G + + ++
Sbjct: 83 LK-QIEHTLNEKRIQQAVNFPFLVKLEFSFKDNS--NLYMVLEYAPGGEMFSHLRRIGRF 139
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +K+ D G A ++ T
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLID-QQGYIKVADFGFAKRVKGRT 196
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 197 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 131/281 (46%), Gaps = 30/281 (10%)
Query: 78 YVRYD--EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVL-------QLPGDLQKLYSE 128
Y +YD +V+G+G V + G E A VKI +V QL + E
Sbjct: 93 YQKYDPKDVIGRGVSSVVRRCVHRATGHEFA---VKIMEVTAERLSPEQLEEVREATRRE 149
Query: 129 VHLLKSLKDD-NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 187
H+L+ + +++ S+ + + ++ +L G L Y + + K ++ R
Sbjct: 150 THILRQVAGHPHIITLIDSY--ESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMR 207
Query: 188 QILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ-QPTARSVIGTPE 246
+L + +LH++N I+HRDLK +NI ++ N ++++ D G + ++ R + GTP
Sbjct: 208 SLLEAVSFLHANN--IVHRDLKPENILLDDNM-QIRLSDFGFSCHLEPGEKLRELCGTPG 264
Query: 247 FMAPELYEEE-------YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKP 299
++APE+ + Y + VD+++ G+ + ++ P+ + + + + G
Sbjct: 265 YLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH-RRQILMLRMIMEGQYQ 323
Query: 300 ASLAKVND--PQIKGFIEKCL-VPASERLSAKDLLKDPFLQ 337
S + +D +K I + L V RL+A+ L+ PF +
Sbjct: 324 FSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 125/257 (48%), Gaps = 15/257 (5%)
Query: 80 RYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDN 139
++ ++LG+G+F TV A + E A ++ +++ + + E ++ L
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHPF 93
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELYEE 255
IIHRDLK +NI +N + ++I D G A + +Q A +GT ++++PEL E
Sbjct: 152 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 256 EYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFI 314
+ + D+++ G I ++V P+ N IF+K+ + P+ + +
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDFPEKFFPKARDLV 265
Query: 315 EKCLV-PASERLSAKDL 330
EK LV A++RL +++
Sbjct: 266 EKLLVLDATKRLGCEEM 282
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K +P+ D+ LG G+F V G A + V++
Sbjct: 23 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 82
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ + K S+ D+ + M+ E G + + ++
Sbjct: 83 LK-QIEHTLNEKRILQAVNFPFLTKLEFSFKDNS--NLYMVMEYAPGGEMFSHLRRIGRF 139
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +K+ D G A ++ T
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGFAKRVKGRT 196
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 197 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 83 EVLGKGAFKTVYKAF----DEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDD 138
+VLG GAF TVYK E I VA ++ P +++ E +++ S+ +
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS---PKANKEILDEAYVMASVDNP 84
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLVYLH 197
+V + + TV +IT+L G L Y ++HK N+ + + NW QI G+ YL
Sbjct: 85 HVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP--EFMAPE-L 252
++HRDL N+ V VKI D GLA + ++ + G ++MA E +
Sbjct: 142 DRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 253 YEEEYNELVDIYSFGMCILEMVTF 276
Y D++S+G+ + E++TF
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTF 222
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 101/223 (45%), Gaps = 42/223 (18%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E++G G F V+KA G RVK ++ +K EV L L N+V
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNN--------EKAEREVKALAKLDHVNIVH 69
Query: 143 FYKSW---------VDD------------------KKKTVNMITELFTSGNLRQY--RKK 173
+ W DD K K + + E G L Q+ +++
Sbjct: 70 YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR 129
Query: 174 HKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM 233
+ +D + QI G+ Y+HS +IHRDLK NIF+ + +VKIGD GL ++
Sbjct: 130 GEKLDKVLALELFEQITKGVDYIHS--KKLIHRDLKPSNIFLV-DTKQVKIGDFGLVTSL 186
Query: 234 QQPTARS-VIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMV 274
+ R+ GT +M+PE + ++Y + VD+Y+ G+ + E++
Sbjct: 187 KNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 117/243 (48%), Gaps = 15/243 (6%)
Query: 81 YDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNV 140
+ VLGKG+F V A + G A +K D +LQ D++ +E +L ++
Sbjct: 27 FIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQ-DDDVECTMTEKRILSLARNHPF 85
Query: 141 VK--FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 198
+ F D+ + + E G+L + +K + D + +A +I+ L++LH
Sbjct: 86 LTQLFCCFQTPDR---LFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHD 142
Query: 199 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA--MQQPTARSVIGTPEFMAPELYEEE 256
II+RDLK DN+ ++ + G K+ D G+ T + GTP+++APE+ +E
Sbjct: 143 KG--IIYRDLKLDNVLLD-HEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEM 199
Query: 257 -YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG--IKPASLAKVNDPQIKGF 313
Y VD ++ G+ + EM+ P+ E +N +F+ + + + P L + +K F
Sbjct: 200 LYGPAVDWWAMGVLLYEMLCGHAPF-EAENEDDLFEAILNDEVVYPTWLHEDATGILKSF 258
Query: 314 IEK 316
+ K
Sbjct: 259 MTK 261
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 83 EVLGKGAFKTVYKAF----DEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDD 138
+VLG GAF TVYK E I VA ++ P +++ E +++ S+ +
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS---PKANKEILDEAYVMASVDNP 77
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLVYLH 197
+V + + TV +IT+L G L Y ++HK N+ + + NW QI G+ YL
Sbjct: 78 HVCRLLGICLTS---TVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP--EFMAPE-L 252
++HRDL N+ V VKI D GLA + ++ + G ++MA E +
Sbjct: 135 DRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 253 YEEEYNELVDIYSFGMCILEMVTF 276
Y D++S+G+ + E++TF
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTF 215
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 125/257 (48%), Gaps = 15/257 (5%)
Query: 80 RYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDN 139
++ ++LG+G+F TV A + E A ++ +++ + + E ++ L
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHPF 93
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELYEE 255
IIHRDLK +NI +N + ++I D G A + +Q A +GT ++++PEL E
Sbjct: 152 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 256 EYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFI 314
+ + D+++ G I ++V P+ N IF+K+ + P+ + +
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDFPEKFFPKARDLV 265
Query: 315 EKCLV-PASERLSAKDL 330
EK LV A++RL +++
Sbjct: 266 EKLLVLDATKRLGCEEM 282
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 125/257 (48%), Gaps = 15/257 (5%)
Query: 80 RYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDN 139
++ ++LG+G+F TV A + E A ++ +++ + + E ++ L
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHPF 93
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 94 FVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELYEE 255
IIHRDLK +NI +N + ++I D G A + +Q A +GT ++++PEL E
Sbjct: 152 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 256 EYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFI 314
+ + D+++ G I ++V P+ N IF+K+ + P+ + +
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDFPEKFFPKARDLV 265
Query: 315 EKCLV-PASERLSAKDL 330
EK LV A++RL +++
Sbjct: 266 EKLLVLDATKRLGCEEM 282
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 125/257 (48%), Gaps = 15/257 (5%)
Query: 80 RYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDN 139
++ ++LG+G+F TV A + E A ++ +++ + + E ++ L
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHPF 91
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 92 FVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELYEE 255
IIHRDLK +NI +N + ++I D G A + +Q A +GT ++++PEL E
Sbjct: 150 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 256 EYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFI 314
+ + D+++ G I ++V P+ N IF+K+ + P+ + +
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDFPEKFFPKARDLV 263
Query: 315 EKCLV-PASERLSAKDL 330
EK LV A++RL +++
Sbjct: 264 EKLLVLDATKRLGCEEM 280
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 125/257 (48%), Gaps = 15/257 (5%)
Query: 80 RYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDN 139
++ ++LG+G+F TV A + E A ++ +++ + + E ++ L
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHPF 91
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 92 FVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELYEE 255
IIHRDLK +NI +N + ++I D G A + +Q A +GT ++++PEL E
Sbjct: 150 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 256 EYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFI 314
+ + D+++ G I ++V P+ N IF+K+ + P+ + +
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDFPEKFFPKARDLV 263
Query: 315 EKCLV-PASERLSAKDL 330
EK LV A++RL +++
Sbjct: 264 EKLLVLDATKRLGCEEM 280
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K +P+ D+ LG G+F V G A + V++
Sbjct: 23 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 82
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ + K S+ D+ + M+ E G + + ++
Sbjct: 83 LK-QIEHTLNEKRILQAVNFPFLTKLEFSFKDNS--NLYMVMEYAPGGEMFSHLRRIGRF 139
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +K+ D G A ++ T
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGFAKRVKGRT 196
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 197 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQL--PGDLQKLYSEVHLLKSLKDDNV 140
+VLG GAF TVYK G +V V I ++ + P +++ E +++ S+ + +V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVDNPHV 82
Query: 141 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLVYLHSH 199
+ + TV +IT+L G L Y ++HK N+ + + NW QI G+ YL
Sbjct: 83 CRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP--EFMAPE-LYE 254
++HRDL N+ V VKI D GLA + ++ + G ++MA E +
Sbjct: 140 R--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 255 EEYNELVDIYSFGMCILEMVTF 276
Y D++S+G+ + E++TF
Sbjct: 197 RIYTHQSDVWSYGVTVWELMTF 218
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 83 EVLGKGAFKTVYKAF----DEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDD 138
+VLG GAF TVYK E I VA ++ P +++ E +++ S+ +
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS---PKANKEILDEAYVMASVDNP 80
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLVYLH 197
+V + + TV +IT+L G L Y ++HK N+ + + NW QI G+ YL
Sbjct: 81 HVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP--EFMAPE-L 252
++HRDL N+ V VKI D GLA + ++ + G ++MA E +
Sbjct: 138 DRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 253 YEEEYNELVDIYSFGMCILEMVTF 276
Y D++S+G+ + E++TF
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTF 218
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 100/198 (50%), Gaps = 11/198 (5%)
Query: 84 VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKF 143
++G+G++ V K ++ G VA + D ++ + E+ LLK L+ +N+V
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIA--MREIKLLKQLRHENLVNL 89
Query: 144 YKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPI 203
+ V KKK ++ E L +D +V++ + QI++G+ + HSHN I
Sbjct: 90 LE--VCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN--I 145
Query: 204 IHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELY--EEEYNE 259
IHRD+K +NI V+ + G VK+ D G A + P + T + APEL + +Y +
Sbjct: 146 IHRDIKPENILVSQS-GVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGK 204
Query: 260 LVDIYSFGMCILEMVTFE 277
VD+++ G + EM E
Sbjct: 205 AVDVWAIGCLVTEMFMGE 222
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 83 EVLGKGAFKTVYKAF----DEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDD 138
+VLG GAF TVYK E I VA ++ P +++ E +++ S+ +
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS---PKANKEILDEAYVMASVDNP 80
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLVYLH 197
+V + + TV +IT+L G L Y ++HK N+ + + NW QI G+ YL
Sbjct: 81 HVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP--EFMAPE-L 252
++HRDL N+ V VKI D GLA + ++ + G ++MA E +
Sbjct: 138 DRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 253 YEEEYNELVDIYSFGMCILEMVTF 276
Y D++S+G+ + E++TF
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTF 218
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQL--PGDLQKLYSEVHLLKSLKDDNV 140
+VLG GAF TVYK G +V V I ++ + P +++ E +++ S+ + +V
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVDNPHV 89
Query: 141 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLVYLHSH 199
+ + TV +IT+L G L Y ++HK N+ + + NW QI G+ YL
Sbjct: 90 CRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 146
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP--EFMAPE-LYE 254
++HRDL N+ V VKI D GLA + ++ + G ++MA E +
Sbjct: 147 R--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 203
Query: 255 EEYNELVDIYSFGMCILEMVTF 276
Y D++S+G+ + E++TF
Sbjct: 204 RIYTHQSDVWSYGVTVWELMTF 225
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 83 EVLGKGAFKTVYKAF----DEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDD 138
+VLG GAF TVYK E I VA ++ P +++ E +++ S+ +
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS---PKANKEILDEAYVMASVDNP 83
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLVYLH 197
+V + + TV +IT+L G L Y ++HK N+ + + NW QI G+ YL
Sbjct: 84 HVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 140
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP--EFMAPE-L 252
++HRDL N+ V VKI D GLA + ++ + G ++MA E +
Sbjct: 141 DRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 197
Query: 253 YEEEYNELVDIYSFGMCILEMVTF 276
Y D++S+G+ + E++TF
Sbjct: 198 LHRIYTHQSDVWSYGVTVWELMTF 221
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 125/257 (48%), Gaps = 15/257 (5%)
Query: 80 RYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDN 139
++ ++LG+G+F TV A + E A ++ +++ + + E ++ L
Sbjct: 13 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHPF 71
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 72 FVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 129
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELYEE 255
IIHRDLK +NI +N + ++I D G A + +Q A +GT ++++PEL E
Sbjct: 130 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 186
Query: 256 EYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFI 314
+ + D+++ G I ++V P+ N IF+K+ + P+ + +
Sbjct: 187 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDFPEKFFPKARDLV 243
Query: 315 EKCLV-PASERLSAKDL 330
EK LV A++RL +++
Sbjct: 244 EKLLVLDATKRLGCEEM 260
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 83 EVLGKGAFKTVYKAF----DEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDD 138
+VLG GAF TVYK E I VA ++ P +++ E +++ S+ +
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS---PKANKEILDEAYVMASVDNP 77
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLVYLH 197
+V + + TV +IT+L G L Y ++HK N+ + + NW QI G+ YL
Sbjct: 78 HVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP--EFMAPE-L 252
++HRDL N+ V VKI D GLA + ++ + G ++MA E +
Sbjct: 135 DRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 253 YEEEYNELVDIYSFGMCILEMVTF 276
Y D++S+G+ + E++TF
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTF 215
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 125/257 (48%), Gaps = 15/257 (5%)
Query: 80 RYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDN 139
++ ++LG+G+F TV A + E A ++ +++ + + E ++ L
Sbjct: 10 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHPF 68
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 69 FVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 126
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELYEE 255
IIHRDLK +NI +N + ++I D G A + +Q A +GT ++++PEL E
Sbjct: 127 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 183
Query: 256 EYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFI 314
+ + D+++ G I ++V P+ N IF+K+ + P+ + +
Sbjct: 184 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDFPEKFFPKARDLV 240
Query: 315 EKCLV-PASERLSAKDL 330
EK LV A++RL +++
Sbjct: 241 EKLLVLDATKRLGCEEM 257
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 16/240 (6%)
Query: 65 ADSDFVEK--DPSGRYVRYDE-----VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
A DF++K +P+ D+ LG G+F V G A + V++
Sbjct: 23 AKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK 82
Query: 118 LPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV 177
L ++ +E +L+++ + K S+ D+ + M+ E G + + ++
Sbjct: 83 LK-QIEHTLNEKRILQAVNFPFLTKLEFSFKDNS--NLYMVMEYAPGGEMFSHLRRIGRF 139
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 237
+ +A QI+ YLHS + +I+RDLK +N+ ++ G +K+ D G A ++ T
Sbjct: 140 XEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMID-QQGYIKVTDFGFAKRVKGRT 196
Query: 238 ARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ GTPE++APE + + YN+ VD ++ G+ I EM YP P QI++K+ SG
Sbjct: 197 W-XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSG 254
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 111/239 (46%), Gaps = 16/239 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V AFD G VA K+ Q ++ Y E+ LLK +K +NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVK--KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + V ++T L +L K K D V + QIL GL Y+HS +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV-QFLIYQILRGLKYIHSAD 145
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEE--EYN 258
IIHRDLK N+ VN + E+KI D LA + T + APE+ YN
Sbjct: 146 --IIHRDLKPSNLAVNED-CELKILDFYLARHTDDEMT-GYVATRWYRAPEIMLNWMHYN 201
Query: 259 ELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
+ VDI+S G + E++T +P ++ + ++ ++ L K++ + +I+
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ 260
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 83 EVLGKGAFKTVYKAF----DEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDD 138
+VLG GAF TVYK E I VA ++ P +++ E +++ S+ +
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS---PKANKEILDEAYVMASVDNP 74
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLVYLH 197
+V + + TV +IT+L G L Y ++HK N+ + + NW QI G+ YL
Sbjct: 75 HVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLE 131
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP--EFMAPE-L 252
++HRDL N+ V VKI D GLA + ++ + G ++MA E +
Sbjct: 132 DRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 188
Query: 253 YEEEYNELVDIYSFGMCILEMVTF 276
Y D++S+G+ + E++TF
Sbjct: 189 LHRIYTHQSDVWSYGVTVWELMTF 212
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 124/257 (48%), Gaps = 15/257 (5%)
Query: 80 RYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDN 139
++ ++LG+G+F TV A + E A ++ +++ + + E ++ L
Sbjct: 40 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHPF 98
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
VK Y + DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 99 FVKLYFCFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELY-E 254
IIHRDLK +NI +N + ++I D G A + +Q A +GT ++++PEL E
Sbjct: 157 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 213
Query: 255 EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFI 314
+ + D+++ G I ++V P+ N IF+K+ + P+ + +
Sbjct: 214 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDFPEKFFPKARDLV 270
Query: 315 EKCLV-PASERLSAKDL 330
EK LV A++RL +++
Sbjct: 271 EKLLVLDATKRLGCEEM 287
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 17/225 (7%)
Query: 79 VRYDEVLGKGAFKTVYKA-FDEFAG--IEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL 135
+R E LG G+F V + +D +G + VA +K DVL P + EV+ + SL
Sbjct: 20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLK-PDVLSQPEAMDDFIREVNAMHSL 78
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLV 194
N+++ Y + K M+TEL G+L +KH+ + + + +A Q+ G+
Sbjct: 79 DHRNLIRLYGVVLTPPMK---MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 135
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE-----FMA 249
YL S IHRDL N+ + VKIGD GL A+ Q V+ + A
Sbjct: 136 YLESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 192
Query: 250 PE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 293
PE L ++ D + FG+ + EM T+ N +QI K+
Sbjct: 193 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 237
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 125/257 (48%), Gaps = 15/257 (5%)
Query: 80 RYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDN 139
++ ++LG+G+F TV A + E A ++ +++ + + E ++ L
Sbjct: 11 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHPF 69
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 70 FVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 127
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELYEE 255
IIHRDLK +NI +N + ++I D G A + +Q A +GT ++++PEL E
Sbjct: 128 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 184
Query: 256 EYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFI 314
+ + D+++ G I ++V P+ N IF+K+ + P+ + +
Sbjct: 185 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDFPEKFFPKARDLV 241
Query: 315 EKCLV-PASERLSAKDL 330
EK LV A++RL +++
Sbjct: 242 EKLLVLDATKRLGCEEM 258
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 17/225 (7%)
Query: 79 VRYDEVLGKGAFKTVYKA-FDEFAG--IEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL 135
+R E LG G+F V + +D +G + VA +K DVL P + EV+ + SL
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLK-PDVLSQPEAMDDFIREVNAMHSL 68
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLV 194
N+++ Y + K M+TEL G+L +KH+ + + + +A Q+ G+
Sbjct: 69 DHRNLIRLYGVVLTPPMK---MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 125
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE-----FMA 249
YL S IHRDL N+ + VKIGD GL A+ Q V+ + A
Sbjct: 126 YLESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 182
Query: 250 PE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 293
PE L ++ D + FG+ + EM T+ N +QI K+
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 227
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 17/266 (6%)
Query: 77 RYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLK 136
+Y E +G G F V A G VA +KI D L DL ++ +E+ LK+L+
Sbjct: 10 KYYELHETIGTGGFAKVKLACHILTGEMVA---IKIMDKNTLGSDLPRIKTEIEALKNLR 66
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYL 196
++ + Y V + + M+ E G L Y + + + RQI+ + Y+
Sbjct: 67 HQHICQLYH--VLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYV 124
Query: 197 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAI---AMQQPTARSVIGTPEFMAPELY 253
HS HRDLK +N+ + H ++K+ D GL + ++ G+ + APEL
Sbjct: 125 HSQG--YAHRDLKPENLLFDEYH-KLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELI 181
Query: 254 EEE--YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIK 311
+ + D++S G+ + ++ P+ + N ++KK+ G + K P
Sbjct: 182 QGKSYLGSEADVWSMGILLYVLMCGFLPFDD-DNVMALYKKIMRG--KYDVPKWLSPSSI 238
Query: 312 GFIEKCL-VPASERLSAKDLLKDPFL 336
+++ L V +R+S K+LL P++
Sbjct: 239 LLLQQMLQVDPKKRISMKNLLNHPWI 264
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 125/257 (48%), Gaps = 15/257 (5%)
Query: 80 RYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDN 139
++ ++LG+G+F TV A + E A ++ +++ + + E ++ L
Sbjct: 12 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHPF 70
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 71 FVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 128
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELYEE 255
IIHRDLK +NI +N + ++I D G A + +Q A +GT ++++PEL E
Sbjct: 129 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 185
Query: 256 EYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFI 314
+ + D+++ G I ++V P+ N IF+K+ + P+ + +
Sbjct: 186 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDFPEKFFPKARDLV 242
Query: 315 EKCLV-PASERLSAKDL 330
EK LV A++RL +++
Sbjct: 243 EKLLVLDATKRLGCEEM 259
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 91/166 (54%), Gaps = 10/166 (6%)
Query: 120 GDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDI 179
+++ ++ E+ +++ L+ +V + S+ D++ + M+ +L G+LR + +++ +
Sbjct: 57 NEVRNVFKELQIMQGLEHPFLVNLWYSFQDEED--MFMVVDLLLGGDLRYHLQQNVHFKE 114
Query: 180 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA- 238
+ +K + +++ L YL N IIHRD+K DNI ++ HG V I D +A + + T
Sbjct: 115 ETVKLFICELVMALDYLQ--NQRIIHRDMKPDNILLD-EHGHVHITDFNIAAMLPRETQI 171
Query: 239 RSVIGTPEFMAPELYEEE----YNELVDIYSFGMCILEMVTFEYPY 280
++ GT +MAPE++ Y+ VD +S G+ E++ PY
Sbjct: 172 TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY 217
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 125/257 (48%), Gaps = 15/257 (5%)
Query: 80 RYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDN 139
++ ++LG+G+F TV A + E A ++ +++ + + E ++ L
Sbjct: 17 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHPF 75
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 76 FVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELYEE 255
IIHRDLK +NI +N + ++I D G A + +Q A +GT ++++PEL E
Sbjct: 134 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 190
Query: 256 EYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFI 314
+ + D+++ G I ++V P+ N IF+K+ + P+ + +
Sbjct: 191 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDFPEKFFPKARDLV 247
Query: 315 EKCLV-PASERLSAKDL 330
EK LV A++RL +++
Sbjct: 248 EKLLVLDATKRLGCEEM 264
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 83 EVLGKGAFKTVYKAF----DEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDD 138
+VLG GAF TVYK E I VA ++ P +++ E +++ S+ +
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS---PKANKEILDEAYVMASVDNP 77
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLVYLH 197
+V + + TV +IT+L G L Y ++HK N+ + + NW QI G+ YL
Sbjct: 78 HVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP--EFMAPE-L 252
++HRDL N+ V VKI D GLA + ++ + G ++MA E +
Sbjct: 135 DRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 253 YEEEYNELVDIYSFGMCILEMVTF 276
Y D++S+G+ + E++TF
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTF 215
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 83 EVLGKGAFKTVYKAF----DEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDD 138
+VLG GAF TVYK E I VA ++ P +++ E +++ S+ +
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS---PKANKEILDEAYVMASVDNP 71
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLVYLH 197
+V + + TV +IT+L G L Y ++HK N+ + + NW QI G+ YL
Sbjct: 72 HVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 128
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP--EFMAPE-L 252
++HRDL N+ V VKI D GLA + ++ + G ++MA E +
Sbjct: 129 DRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 185
Query: 253 YEEEYNELVDIYSFGMCILEMVTF 276
Y D++S+G+ + E++TF
Sbjct: 186 LHRIYTHQSDVWSYGVTVWELMTF 209
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 101/222 (45%), Gaps = 16/222 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E LG G F V + + G +VA + + + P + ++ E+ ++K L NVV
Sbjct: 21 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELS---PKNRERWCLEIQIMKKLNHPNVVS 77
Query: 143 FYKSWVDDKKKTVN----MITELFTSGNLRQYRKKHKN---VDIKVIKNWARQILHGLVY 195
+ +K N + E G+LR+Y + +N + I+ I L Y
Sbjct: 78 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRY 137
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGEV--KIGDLGLAIAMQQ-PTARSVIGTPEFMAPEL 252
LH + IIHRDLK +NI + + KI DLG A + Q +GT +++APEL
Sbjct: 138 LHENR--IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPEL 195
Query: 253 YEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 293
E++ Y VD +SFG E +T P+ P Q KV
Sbjct: 196 LEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKV 237
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 101/222 (45%), Gaps = 16/222 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E LG G F V + + G +VA + + + P + ++ E+ ++K L NVV
Sbjct: 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELS---PKNRERWCLEIQIMKKLNHPNVVS 76
Query: 143 FYKSWVDDKKKTVN----MITELFTSGNLRQYRKKHKN---VDIKVIKNWARQILHGLVY 195
+ +K N + E G+LR+Y + +N + I+ I L Y
Sbjct: 77 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRY 136
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGEV--KIGDLGLAIAMQQ-PTARSVIGTPEFMAPEL 252
LH + IIHRDLK +NI + + KI DLG A + Q +GT +++APEL
Sbjct: 137 LHENR--IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPEL 194
Query: 253 YEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 293
E++ Y VD +SFG E +T P+ P Q KV
Sbjct: 195 LEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKV 236
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 125/257 (48%), Gaps = 15/257 (5%)
Query: 80 RYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDN 139
++ ++LG+G+F TV A + E A ++ +++ + + E ++ L
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHPF 90
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 91 FVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELYEE 255
IIHRDLK +NI +N + ++I D G A + +Q A +GT ++++PEL E
Sbjct: 149 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 205
Query: 256 EYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFI 314
+ + D+++ G I ++V P+ N IF+K+ + P+ + +
Sbjct: 206 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDFPEKFFPKARDLV 262
Query: 315 EKCLV-PASERLSAKDL 330
EK LV A++RL +++
Sbjct: 263 EKLLVLDATKRLGCEEM 279
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 112/237 (47%), Gaps = 40/237 (16%)
Query: 76 GRYVRYDE---VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLL 132
GRY+ E LG+G F V++A ++ A R+++ + +L + K+ EV L
Sbjct: 1 GRYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELARE--KVMREVKAL 57
Query: 133 KSLKDDNVVKFYKSWVDDK----------KKTVNMITELFTSGNLRQYRKKHKNVDIK-- 180
L+ +V+++ +W++ K + + +L NL+ + ++ +
Sbjct: 58 AKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERER 117
Query: 181 -VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ---- 235
V + QI + +LHS ++HRDLK NIF + VK+GD GL AM Q
Sbjct: 118 SVCLHIFLQIAEAVEFLHSKG--LMHRDLKPSNIFFTMD-DVVKVGDFGLVTAMDQDEEE 174
Query: 236 --------PTARSV--IGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYS 281
AR +GT +M+PE ++ Y+ VDI+S G+ + E++ YP+S
Sbjct: 175 QTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL---YPFS 228
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 17/225 (7%)
Query: 79 VRYDEVLGKGAFKTVYKA-FDEFAG--IEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL 135
+R E LG G+F V + +D +G + VA +K DVL P + EV+ + SL
Sbjct: 14 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLK-PDVLSQPEAMDDFIREVNAMHSL 72
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLV 194
N+++ Y + K M+TEL G+L +KH+ + + + +A Q+ G+
Sbjct: 73 DHRNLIRLYGVVLTPPMK---MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 129
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE-----FMA 249
YL S IHRDL N+ + VKIGD GL A+ Q V+ + A
Sbjct: 130 YLESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 250 PE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 293
PE L ++ D + FG+ + EM T+ N +QI K+
Sbjct: 187 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 231
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 16/213 (7%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G F VY+ + + VA +K D + ++++ E ++K +K N+V+
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVDIKVIKNWARQILHGLVYLHSHNPP 202
V ++ +ITE T GNL Y ++ + V V+ A QI + YL N
Sbjct: 74 G--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-- 129
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP---EFMAPE-LYEEEYN 258
IHRDL N V NH VK+ D GL+ M T + G ++ APE L +++
Sbjct: 130 FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 259 ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFK 291
D+++FG+ + E+ T+ +P+Q+++
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYE 221
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 17/225 (7%)
Query: 79 VRYDEVLGKGAFKTVYKA-FDEFAG--IEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL 135
+R E LG G+F V + +D +G + VA +K DVL P + EV+ + SL
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLK-PDVLSQPEAMDDFIREVNAMHSL 68
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLV 194
N+++ Y + K M+TEL G+L +KH+ + + + +A Q+ G+
Sbjct: 69 DHRNLIRLYGVVLTPPMK---MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 125
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE-----FMA 249
YL S IHRDL N+ + VKIGD GL A+ Q V+ + A
Sbjct: 126 YLESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 250 PE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 293
PE L ++ D + FG+ + EM T+ N +QI K+
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 227
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 17/225 (7%)
Query: 79 VRYDEVLGKGAFKTVYKA-FDEFAG--IEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL 135
+R E LG G+F V + +D +G + VA +K DVL P + EV+ + SL
Sbjct: 14 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLK-PDVLSQPEAMDDFIREVNAMHSL 72
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLV 194
N+++ Y + K M+TEL G+L +KH+ + + + +A Q+ G+
Sbjct: 73 DHRNLIRLYGVVLTPPMK---MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 129
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE-----FMA 249
YL S IHRDL N+ + VKIGD GL A+ Q V+ + A
Sbjct: 130 YLESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 250 PE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 293
PE L ++ D + FG+ + EM T+ N +QI K+
Sbjct: 187 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 231
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 15/216 (6%)
Query: 73 DPSGRYVRYDEV--LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKL-YSEV 129
D R RY+++ LG+G F TVYKA D+ VA ++K+ + + + E+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 130 HLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKV-IKNWARQ 188
LL+ L N++ ++ K ++++ + F +L K + V IK +
Sbjct: 64 KLLQELSHPNIIGLLDAF--GHKSNISLVFD-FMETDLEVIIKDNSLVLTPSHIKAYMLM 120
Query: 189 ILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV--IGTPE 246
L GL YLH H I+HRDLK +N+ ++ N G +K+ D GLA + P + T
Sbjct: 121 TLQGLEYLHQHW--ILHRDLKPNNLLLDEN-GVLKLADFGLAKSFGSPNRAYXHQVVTRW 177
Query: 247 FMAPELY--EEEYNELVDIYSFGMCILEMVTFEYPY 280
+ APEL Y VD+++ G CIL + P+
Sbjct: 178 YRAPELLFGARMYGVGVDMWAVG-CILAELLLRVPF 212
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 133/297 (44%), Gaps = 39/297 (13%)
Query: 78 YVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQK--LYSEVHLLKSL 135
Y E LG G F V K ++ G++ A +K + + + EV +LK +
Sbjct: 12 YYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVY 195
+ NV+ ++ + + K V +I EL G L + + +++ + + +QIL+G+ Y
Sbjct: 72 QHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 196 LHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIGTPEFMAPE 251
LHS I H DLK +NI + N +KI D GLA + +++ GTPEF+APE
Sbjct: 130 LHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 252 LYEEEYNEL-VDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVN---- 306
+ E L D++S G+ +++ P+ K +LA V+
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPF-------------LGDTKQETLANVSAVNY 234
Query: 307 ----------DPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQVENQKEPICDPLKLP 352
K FI + LV +R++ +D L+ P+++ ++ ++ + P
Sbjct: 235 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 291
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 17/225 (7%)
Query: 79 VRYDEVLGKGAFKTVYKA-FDEFAG--IEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL 135
+R E LG G+F V + +D +G + VA +K DVL P + EV+ + SL
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLK-PDVLSQPEAMDDFIREVNAMHSL 68
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLV 194
N+++ Y + K M+TEL G+L +KH+ + + + +A Q+ G+
Sbjct: 69 DHRNLIRLYGVVLTPPMK---MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 125
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE-----FMA 249
YL S IHRDL N+ + VKIGD GL A+ Q V+ + A
Sbjct: 126 YLESKR--FIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 250 PE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 293
PE L ++ D + FG+ + EM T+ N +QI K+
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 227
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 124/257 (48%), Gaps = 15/257 (5%)
Query: 80 RYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDN 139
++ ++LG+G+F T A + E A ++ +++ + + E ++ L
Sbjct: 33 KFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHPF 91
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
VK Y ++ DD+K + +G L +Y +K + D + + +I+ L YLH
Sbjct: 92 FVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----QQPTARSVIGTPEFMAPELYEE 255
IIHRDLK +NI +N + ++I D G A + +Q A +GT ++++PEL E
Sbjct: 150 G--IIHRDLKPENILLNEDM-HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 256 EYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFI 314
+ + D+++ G I ++V P+ N IF+K+ + P+ + +
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIK--LEYDFPEKFFPKARDLV 263
Query: 315 EKCLV-PASERLSAKDL 330
EK LV A++RL +++
Sbjct: 264 EKLLVLDATKRLGCEEM 280
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 100/240 (41%), Gaps = 21/240 (8%)
Query: 64 DADSDFVEKDPSGRYVRYDEV----------------LGKGAFKTVYKAFDEFAGIEVAW 107
D F+E D R+ ++ V +G+G F VY G A
Sbjct: 159 DVFQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAM 218
Query: 108 SRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNL 167
+ + G+ L + L D S+ ++ I +L G+L
Sbjct: 219 KCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL 278
Query: 168 RQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDL 227
+ +H ++ +A +I+ GL H HN +++RDLK NI ++ HG V+I DL
Sbjct: 279 HYHLSQHGVFSEADMRFYAAEIILGLE--HMHNRFVVYRDLKPANILLD-EHGHVRISDL 335
Query: 228 GLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMCILEMVTFEYPYSECKN 285
GLA + + +GT +MAPE+ ++ Y+ D +S G + +++ P+ + K
Sbjct: 336 GLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 395
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 100/240 (41%), Gaps = 21/240 (8%)
Query: 64 DADSDFVEKDPSGRYVRYDEV----------------LGKGAFKTVYKAFDEFAGIEVAW 107
D F+E D R+ ++ V +G+G F VY G A
Sbjct: 160 DVFQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAM 219
Query: 108 SRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNL 167
+ + G+ L + L D S+ ++ I +L G+L
Sbjct: 220 KCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL 279
Query: 168 RQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDL 227
+ +H ++ +A +I+ GL H HN +++RDLK NI ++ HG V+I DL
Sbjct: 280 HYHLSQHGVFSEADMRFYAAEIILGLE--HMHNRFVVYRDLKPANILLD-EHGHVRISDL 336
Query: 228 GLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMCILEMVTFEYPYSECKN 285
GLA + + +GT +MAPE+ ++ Y+ D +S G + +++ P+ + K
Sbjct: 337 GLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 134/294 (45%), Gaps = 33/294 (11%)
Query: 78 YVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQK--LYSEVHLLKSL 135
Y E LG G F V K ++ G++ A +K + + + EV +LK +
Sbjct: 11 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 70
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVY 195
+ NV+ ++ + + K V +I EL G L + + +++ + + +QIL+G+ Y
Sbjct: 71 QHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 128
Query: 196 LHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIGTPEFMAPE 251
LHS I H DLK +NI + N +KI D GLA + +++ GTPEF+APE
Sbjct: 129 LHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 186
Query: 252 LYEEEYNEL-VDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVN---- 306
+ E L D++S G+ +++ P F T A+++ VN
Sbjct: 187 IVNYEPLGLEADMWSIGVITYILLSGASP----------FLGDTKQETLANVSAVNYEFE 236
Query: 307 -------DPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQVENQKEPICDPLKLP 352
K FI + LV +R++ +D L+ P+++ ++ ++ + P
Sbjct: 237 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 290
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 94/222 (42%), Gaps = 32/222 (14%)
Query: 128 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR 187
+V + L D ++ KFYK +D K + + ++ A
Sbjct: 107 DVWICXELXDTSLDKFYKQVID-----------------------KGQTIPEDILGKIAV 143
Query: 188 QILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV------ 241
I+ L +LHS +IHRD+K N+ +N G+VK D G++ + A+ +
Sbjct: 144 SIVKALEHLHS-KLSVIHRDVKPSNVLINA-LGQVKXCDFGISGYLVDDVAKDIDAGCKP 201
Query: 242 IGTPEFMAPELYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPAS 301
PE + PEL ++ Y+ DI+S G+ +E+ +PY P Q K+V P
Sbjct: 202 YXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQL 261
Query: 302 LAKVNDPQIKGFIEKCLVPAS-ERLSAKDLLKDPFLQVENQK 342
A + F +CL S ER + +L + PF + K
Sbjct: 262 PADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFFTLHESK 303
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 108/229 (47%), Gaps = 22/229 (9%)
Query: 58 GTAEPPDADSDFVEKDPSGRYVRYDEVLGKGAFKTVYKAF----DEFAGIEVAWSRVKID 113
G+ E P+ + K+ + ++ VLG GAF TVYK E I VA ++
Sbjct: 1 GSGEAPNQALLRILKETEFKKIK---VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 57
Query: 114 DVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK 173
P +++ E +++ S+ + +V + + TV +I +L G L Y ++
Sbjct: 58 TS---PKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLIMQLMPFGCLLDYVRE 111
Query: 174 HK-NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-- 230
HK N+ + + NW QI G+ YL ++HRDL N+ V VKI D GLA
Sbjct: 112 HKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKL 168
Query: 231 IAMQQPTARSVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 276
+ ++ + G ++MA E + Y D++S+G+ + E++TF
Sbjct: 169 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 217
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 100/240 (41%), Gaps = 21/240 (8%)
Query: 64 DADSDFVEKDPSGRYVRYDEV----------------LGKGAFKTVYKAFDEFAGIEVAW 107
D F+E D R+ ++ V +G+G F VY G A
Sbjct: 160 DVFQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAM 219
Query: 108 SRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNL 167
+ + G+ L + L D S+ ++ I +L G+L
Sbjct: 220 KCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL 279
Query: 168 RQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDL 227
+ +H ++ +A +I+ GL H HN +++RDLK NI ++ HG V+I DL
Sbjct: 280 HYHLSQHGVFSEADMRFYAAEIILGLE--HMHNRFVVYRDLKPANILLD-EHGHVRISDL 336
Query: 228 GLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMCILEMVTFEYPYSECKN 285
GLA + + +GT +MAPE+ ++ Y+ D +S G + +++ P+ + K
Sbjct: 337 GLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 100/240 (41%), Gaps = 21/240 (8%)
Query: 64 DADSDFVEKDPSGRYVRYDEV----------------LGKGAFKTVYKAFDEFAGIEVAW 107
D F+E D R+ ++ V +G+G F VY G A
Sbjct: 160 DVFQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAM 219
Query: 108 SRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNL 167
+ + G+ L + L D S+ ++ I +L G+L
Sbjct: 220 KCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL 279
Query: 168 RQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDL 227
+ +H ++ +A +I+ GL H HN +++RDLK NI ++ HG V+I DL
Sbjct: 280 HYHLSQHGVFSEADMRFYAAEIILGLE--HMHNRFVVYRDLKPANILLD-EHGHVRISDL 336
Query: 228 GLAIAMQQPTARSVIGTPEFMAPELYEE--EYNELVDIYSFGMCILEMVTFEYPYSECKN 285
GLA + + +GT +MAPE+ ++ Y+ D +S G + +++ P+ + K
Sbjct: 337 GLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 133/297 (44%), Gaps = 39/297 (13%)
Query: 78 YVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQK--LYSEVHLLKSL 135
Y E LG G F V K ++ G++ A +K + + + EV +LK +
Sbjct: 11 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 70
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVY 195
+ NV+ ++ + + K V +I EL G L + + +++ + + +QIL+G+ Y
Sbjct: 71 QHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 128
Query: 196 LHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIGTPEFMAPE 251
LHS I H DLK +NI + N +KI D GLA + +++ GTPEF+APE
Sbjct: 129 LHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 186
Query: 252 LYEEEYNEL-VDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVN---- 306
+ E L D++S G+ +++ P+ K +LA V+
Sbjct: 187 IVNYEPLGLEADMWSIGVITYILLSGASPF-------------LGDTKQETLANVSAVNY 233
Query: 307 ----------DPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQVENQKEPICDPLKLP 352
K FI + LV +R++ +D L+ P+++ ++ ++ + P
Sbjct: 234 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 290
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 133/297 (44%), Gaps = 39/297 (13%)
Query: 78 YVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQK--LYSEVHLLKSL 135
Y E LG G F V K ++ G++ A +K + + + EV +LK +
Sbjct: 12 YYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVY 195
+ NV+ ++ + + K V +I EL G L + + +++ + + +QIL+G+ Y
Sbjct: 72 QHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 196 LHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIGTPEFMAPE 251
LHS I H DLK +NI + N +KI D GLA + +++ GTPEF+APE
Sbjct: 130 LHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 252 LYEEEYNEL-VDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVN---- 306
+ E L D++S G+ +++ P+ K +LA V+
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPF-------------LGDTKQETLANVSAVNY 234
Query: 307 ----------DPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQVENQKEPICDPLKLP 352
K FI + LV +R++ +D L+ P+++ ++ ++ + P
Sbjct: 235 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 291
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 133/297 (44%), Gaps = 39/297 (13%)
Query: 78 YVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQK--LYSEVHLLKSL 135
Y E LG G F V K ++ G++ A +K + + + EV +LK +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVY 195
+ NV+ ++ + + K V +I EL G L + + +++ + + +QIL+G+ Y
Sbjct: 72 QHPNVITLHEVY--ENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 196 LHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIGTPEFMAPE 251
LHS I H DLK +NI + N +KI D GLA + +++ GTPEF+APE
Sbjct: 130 LHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 252 LYEEEYNEL-VDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVN---- 306
+ E L D++S G+ +++ P+ K +LA V+
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPF-------------LGDTKQETLANVSAVNY 234
Query: 307 ----------DPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQVENQKEPICDPLKLP 352
K FI + LV +R++ +D L+ P+++ ++ ++ + P
Sbjct: 235 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 291
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 110/227 (48%), Gaps = 18/227 (7%)
Query: 58 GTAEPPDADSDFVEKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
G+ E P+ + K+ + ++ VLG GAF TVYK G +V V I ++ +
Sbjct: 1 GSGEAPNQALLRILKETEFKKIK---VLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELRE 56
Query: 118 L--PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 175
P +++ E +++ S+ + +V + + TV +IT+L G L Y ++HK
Sbjct: 57 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHK 113
Query: 176 -NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IA 232
N+ + + NW QI G+ YL ++HRDL N+ V VKI D G A +
Sbjct: 114 DNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGRAKLLG 170
Query: 233 MQQPTARSVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 276
++ + G ++MA E + Y D++S+G+ + E++TF
Sbjct: 171 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 217
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 133/297 (44%), Gaps = 39/297 (13%)
Query: 78 YVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQK--LYSEVHLLKSL 135
Y E LG G F V K ++ G++ A +K + + + EV +LK +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVY 195
+ NV+ ++ + + K V +I EL G L + + +++ + + +QIL+G+ Y
Sbjct: 72 QHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 196 LHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIGTPEFMAPE 251
LHS I H DLK +NI + N +KI D GLA + +++ GTPEF+APE
Sbjct: 130 LHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 252 LYEEEYNEL-VDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVN---- 306
+ E L D++S G+ +++ P+ K +LA V+
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPF-------------LGDTKQETLANVSAVNY 234
Query: 307 ----------DPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQVENQKEPICDPLKLP 352
K FI + LV +R++ +D L+ P+++ ++ ++ + P
Sbjct: 235 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 291
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 136/272 (50%), Gaps = 18/272 (6%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDD--VLQLPGDLQKLYSEVHLLKSLKDDNV 140
E LG G F V K ++ G+E A +K + +++ EV +L+ + NV
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 141 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + + + + V +I EL + G L + + +++ + ++ +QIL G+ YLH+
Sbjct: 78 ITLHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 201 PPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIGTPEFMAPELYEEE 256
I H DLK +NI + N +K+ D GLA ++ +++ GTPEF+APE+ E
Sbjct: 136 --IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 257 YNEL-VDIYSFGMCILEMVTFEYPY---SECKNPAQIFKKVTSGIKPASLAKVNDPQIKG 312
L D++S G+ +++ P+ ++ + A I V+ + ++ K
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI-TSVSYDFDEEFFSHTSELA-KD 251
Query: 313 FIEKCLVPAS-ERLSAKDLLKDPFLQ-VENQK 342
FI K LV + +RL+ ++ L+ P++ V+NQ+
Sbjct: 252 FIRKLLVKETRKRLTIQEALRHPWITPVDNQQ 283
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 139/276 (50%), Gaps = 20/276 (7%)
Query: 81 YD--EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDD--VLQLPGDLQKLYSEVHLLKSLK 136
YD E LG G F V K ++ G+E A +K + +++ EV +L+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYL 196
NV+ + + + + V +I EL + G L + + +++ + ++ +QIL G+ YL
Sbjct: 74 HHNVITLHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYL 131
Query: 197 HSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIGTPEFMAPEL 252
H+ I H DLK +NI + N +K+ D GLA ++ +++ GTPEF+APE+
Sbjct: 132 HT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
Query: 253 YEEEYNEL-VDIYSFGMCILEMVTFEYPY---SECKNPAQIFKKVTSGIKPASLAKVNDP 308
E L D++S G+ +++ P+ ++ + A I V+ ++ ++
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI-TAVSYDFDEEFFSQTSEL 248
Query: 309 QIKGFIEKCLVPAS-ERLSAKDLLKDPFLQ-VENQK 342
K FI K LV + +RL+ ++ L+ P++ V+NQ+
Sbjct: 249 A-KDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQ 283
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 137/272 (50%), Gaps = 18/272 (6%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDD--VLQLPGDLQKLYSEVHLLKSLKDDNV 140
E LG G F V K ++ G+E A +K + +++ EV +L+ + NV
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 141 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + + + + V +I EL + G L + + +++ + ++ +QIL G+ YLH+
Sbjct: 78 ITLHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT-- 133
Query: 201 PPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIGTPEFMAPELYEEE 256
I H DLK +NI + N +K+ D GLA ++ +++ GTPEF+APE+ E
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 257 YNEL-VDIYSFGMCILEMVTFEYPY---SECKNPAQIFKKVTSGIKPASLAKVNDPQIKG 312
L D++S G+ +++ P+ ++ + A I V+ ++ ++ K
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI-TAVSYDFDEEFFSQTSELA-KD 251
Query: 313 FIEKCLVPAS-ERLSAKDLLKDPFLQ-VENQK 342
FI K LV + +RL+ ++ L+ P++ V+NQ+
Sbjct: 252 FIRKLLVKETRKRLTIQEALRHPWITPVDNQQ 283
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 120/263 (45%), Gaps = 47/263 (17%)
Query: 55 GMLGTAEPPDADSDFVEK--DPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKI 112
G LG A D SDFV + + +R VL +G F VY+A D +G E A R+
Sbjct: 5 GSLGGASGRD-QSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLS 63
Query: 113 DDVLQLPGDLQKLYSEVHLLKSLKDD-NVVKFY------KSWVDDKKKTVNMITELFTSG 165
++ + +Q EV +K L N+V+F K D + ++TEL G
Sbjct: 64 NEEEKNRAIIQ----EVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTEL-CKG 118
Query: 166 NLRQYRKKHK-------NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGN 218
L ++ KK + + +K+ R + H +H PPIIHRDLK +N+ ++ N
Sbjct: 119 QLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQH----MHRQKPPIIHRDLKVENLLLS-N 173
Query: 219 HGEVKIGDLGLAIAMQQ-------PTARSVI-------GTPEFMAPELYEEEYN----EL 260
G +K+ D G A + R+++ TP + PE+ + N E
Sbjct: 174 QGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEK 233
Query: 261 VDIYSFGMCILEMVTF-EYPYSE 282
DI++ G CIL ++ F ++P+ +
Sbjct: 234 QDIWALG-CILYLLCFRQHPFED 255
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 78 YVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQK--LYSEVHLLKSL 135
Y E LG G F V K ++ G++ A +K + + + EV +LK +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVY 195
+ NV+ ++ + + K V +I EL G L + + +++ + + +QIL+G+ Y
Sbjct: 72 QHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 196 LHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIGTPEFMAPE 251
LHS I H DLK +NI + N +KI D GLA + +++ GTPEF+APE
Sbjct: 130 LHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 252 LYEEEYNEL-VDIYSFGMCILEMVTFEYPY 280
+ E L D++S G+ +++ P+
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 123/260 (47%), Gaps = 14/260 (5%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E LG+G+F V A +VA + +L+ ++ E+ LK L+ +++K
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFIS-RQLLKKSDMHMRVEREISYLKLLRHPHIIK 73
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPP 202
Y V + M+ E + G L Y + K + + + +QI+ + Y H H
Sbjct: 74 LYD--VITTPTDIVMVIE-YAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK-- 128
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT-ARSVIGTPEFMAPELYEEEY--NE 259
I+HRDLK +N+ ++ N VKI D GL+ M ++ G+P + APE+ +
Sbjct: 129 IVHRDLKPENLLLDDNLN-VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGP 187
Query: 260 LVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLV 319
VD++S G+ + M+ P+ + P +FKKV S + + P + I + +V
Sbjct: 188 EVDVWSCGIVLYVMLVGRLPFDDEFIP-NLFKKVNSCV--YVMPDFLSPGAQSLIRRMIV 244
Query: 320 P-ASERLSAKDLLKDPFLQV 338
+R++ +++ +DP+ V
Sbjct: 245 ADPMQRITIQEIRRDPWFNV 264
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 10/171 (5%)
Query: 116 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 175
+Q G ++++Y E+ +LK L NVVK + D + + M+ EL G + + K
Sbjct: 74 IQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV-PTLK 132
Query: 176 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 235
+ + + + ++ G+ YLH IIHRD+K N+ V G G +KI D G++ +
Sbjct: 133 PLSEDQARFYFQDLIKGIEYLHYQK--IIHRDIKPSNLLV-GEDGHIKIADFGVSNEFKG 189
Query: 236 PTA--RSVIGTPEFMAPELYEEEY----NELVDIYSFGMCILEMVTFEYPY 280
A + +GTP FMAPE E + +D+++ G+ + V + P+
Sbjct: 190 SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 100/202 (49%), Gaps = 15/202 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQL--PGDLQKLYSEVHLLKSLKDDNV 140
+VLG GAF TVYK G +V V I ++ + P +++ E +++ S+ + +V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVDNPHV 83
Query: 141 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLVYLHSH 199
+ + TV +I +L G L Y ++HK N+ + + NW QI G+ YL
Sbjct: 84 CRLLGICLTS---TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 140
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP--EFMAPE-LYE 254
++HRDL N+ V VKI D GLA + ++ + G ++MA E +
Sbjct: 141 R--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 197
Query: 255 EEYNELVDIYSFGMCILEMVTF 276
Y D++S+G+ + E++TF
Sbjct: 198 RIYTHQSDVWSYGVTVWELMTF 219
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 78 YVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQK--LYSEVHLLKSL 135
Y E LG G F V K ++ G++ A +K + + + EV +LK +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVY 195
+ NV+ ++ + + K V +I EL G L + + +++ + + +QIL+G+ Y
Sbjct: 72 QHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 196 LHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIGTPEFMAPE 251
LHS I H DLK +NI + N +KI D GLA + +++ GTPEF+APE
Sbjct: 130 LHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 252 LYEEEYNEL-VDIYSFGMCILEMVTFEYPY 280
+ E L D++S G+ +++ P+
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 114/257 (44%), Gaps = 16/257 (6%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL-KDDNVVKF 143
LG G++ V+K + G A R + P D + +EV + + + V+
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSM--SPFRGPKDRARKLAEVGSHEKVGQHPCCVRL 122
Query: 144 YKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPI 203
++W ++ + + TEL + ++ + + R L L +LHS +
Sbjct: 123 EQAW--EEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQG--L 178
Query: 204 IHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVI-GTPEFMAPELYEEEYNELVD 262
+H D+K NIF+ G G K+GD GL + + A V G P +MAPEL + Y D
Sbjct: 179 VHLDVKPANIFL-GPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAAD 237
Query: 263 IYSFGMCILEMVT-FEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVPA 321
++S G+ ILE+ E P+ + ++++ G P +++ + L P
Sbjct: 238 VFSLGLTILEVACNMELPHG-----GEGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPD 292
Query: 322 SE-RLSAKDLLKDPFLQ 337
+ R +A+ LL P L+
Sbjct: 293 PKLRATAEALLALPVLR 309
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 129/280 (46%), Gaps = 24/280 (8%)
Query: 70 VEKDPSGRYVRYD--EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQK--L 125
VE Y YD E LG GAF V++ +E A RV + + P L K +
Sbjct: 42 VEVKQGSVYDYYDILEELGSGAFGVVHRC------VEKATGRVFVAKFINTPYPLDKYTV 95
Query: 126 YSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNL--RQYRKKHKNVDIKVIK 183
+E+ ++ L ++ + ++ D K + +I E + G L R + +K + +VI
Sbjct: 96 KNEISIMNQLHHPKLINLHDAFED--KYEMVLILEFLSGGELFDRIAAEDYKMSEAEVI- 152
Query: 184 NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHG-EVKIGDLGLAIAMQ-QPTARSV 241
N+ RQ GL ++H H+ I+H D+K +NI VKI D GLA + +
Sbjct: 153 NYMRQACEGLKHMHEHS--IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVT 210
Query: 242 IGTPEFMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYS--ECKNPAQIFKKVTSGIK 298
T EF APE+ + E D+++ G+ +++ P++ + Q K+
Sbjct: 211 TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD 270
Query: 299 PASLAKVNDPQIKGFIEKCLVPA-SERLSAKDLLKDPFLQ 337
+ + V+ P+ K FI+ L +RL+ D L+ P+L+
Sbjct: 271 EDAFSSVS-PEAKDFIKNLLQKEPRKRLTVHDALEHPWLK 309
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 78 YVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQK--LYSEVHLLKSL 135
Y E LG G F V K ++ G++ A +K + + + EV +LK +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVY 195
+ NV+ ++ + + K V +I EL G L + + +++ + + +QIL+G+ Y
Sbjct: 72 QHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 196 LHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIGTPEFMAPE 251
LHS I H DLK +NI + N +KI D GLA + +++ GTPEF+APE
Sbjct: 130 LHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 252 LYEEEYNEL-VDIYSFGMCILEMVTFEYPY 280
+ E L D++S G+ +++ P+
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 83 EVLGKGAFKTVYKAF----DEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDD 138
+VLG GAF TVYK E I VA ++ P +++ E +++ S+ +
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS---PKANKEILDEAYVMASVDNP 78
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLVYLH 197
+V + + TV +I +L G L Y ++HK N+ + + NW QI G+ YL
Sbjct: 79 HVCRLLGICLTS---TVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 135
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP--EFMAPE-L 252
++HRDL N+ V VKI D GLA + ++ + G ++MA E +
Sbjct: 136 DRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 253 YEEEYNELVDIYSFGMCILEMVTF 276
Y D++S+G+ + E++TF
Sbjct: 193 LHRIYTHQSDVWSYGVTVWELMTF 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 78 YVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQK--LYSEVHLLKSL 135
Y E LG G F V K ++ G++ A +K + + + EV +LK +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVY 195
+ NV+ ++ + + K V +I EL G L + + +++ + + +QIL+G+ Y
Sbjct: 72 QHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 196 LHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIGTPEFMAPE 251
LHS I H DLK +NI + N +KI D GLA + +++ GTPEF+APE
Sbjct: 130 LHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 252 LYEEEYNEL-VDIYSFGMCILEMVTFEYPY 280
+ E L D++S G+ +++ P+
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 78 YVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQK--LYSEVHLLKSL 135
Y E LG G F V K ++ G++ A +K + + + EV +LK +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVY 195
+ NV+ ++ + + K V +I EL G L + + +++ + + +QIL+G+ Y
Sbjct: 72 QHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 196 LHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIGTPEFMAPE 251
LHS I H DLK +NI + N +KI D GLA + +++ GTPEF+APE
Sbjct: 130 LHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 252 LYEEEYNEL-VDIYSFGMCILEMVTFEYPY 280
+ E L D++S G+ +++ P+
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 136/272 (50%), Gaps = 18/272 (6%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDD--VLQLPGDLQKLYSEVHLLKSLKDDNV 140
E LG G F V K ++ G+E A +K + +++ EV +L+ + NV
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 141 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + + + + V +I EL + G L + + +++ + ++ +QIL G+ YLH+
Sbjct: 78 ITLHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT-- 133
Query: 201 PPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIGTPEFMAPELYEEE 256
I H DLK +NI + N +K+ D GLA ++ +++ GTPEF+APE+ E
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 257 YNEL-VDIYSFGMCILEMVTFEYPY---SECKNPAQIFKKVTSGIKPASLAKVNDPQIKG 312
L D++S G+ +++ P+ ++ + A I V+ + ++ K
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI-TSVSYDFDEEFFSHTSELA-KD 251
Query: 313 FIEKCLVPAS-ERLSAKDLLKDPFLQ-VENQK 342
FI K LV + +RL+ ++ L+ P++ V+NQ+
Sbjct: 252 FIRKLLVKETRKRLTIQEALRHPWITPVDNQQ 283
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 136/272 (50%), Gaps = 18/272 (6%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDD--VLQLPGDLQKLYSEVHLLKSLKDDNV 140
E LG G F V K ++ G+E A +K + +++ EV +L+ + NV
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 141 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + + + + V +I EL + G L + + +++ + ++ +QIL G+ YLH+
Sbjct: 78 ITLHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT-- 133
Query: 201 PPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIGTPEFMAPELYEEE 256
I H DLK +NI + N +K+ D GLA ++ +++ GTPEF+APE+ E
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 257 YNEL-VDIYSFGMCILEMVTFEYPY---SECKNPAQIFKKVTSGIKPASLAKVNDPQIKG 312
L D++S G+ +++ P+ ++ + A I V+ + ++ K
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI-TSVSYDFDEEFFSHTSELA-KD 251
Query: 313 FIEKCLVPAS-ERLSAKDLLKDPFLQ-VENQK 342
FI K LV + +RL+ ++ L+ P++ V+NQ+
Sbjct: 252 FIRKLLVKETRKRLTIQEALRHPWITPVDNQQ 283
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 78 YVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQK--LYSEVHLLKSL 135
Y E LG G F V K ++ G++ A +K + + + EV +LK +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVY 195
+ NV+ ++ + + K V +I EL G L + + +++ + + +QIL+G+ Y
Sbjct: 72 QHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 196 LHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIGTPEFMAPE 251
LHS I H DLK +NI + N +KI D GLA + +++ GTPEF+APE
Sbjct: 130 LHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 252 LYEEEYNEL-VDIYSFGMCILEMVTFEYPY 280
+ E L D++S G+ +++ P+
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 83 EVLGKGAFKTVYKAF----DEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDD 138
+VLG GAF TVYK E I VA ++ P +++ E +++ S+ +
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS---PKANKEILDEAYVMASVDNP 78
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLVYLH 197
+V + + TV +I +L G L Y ++HK N+ + + NW QI G+ YL
Sbjct: 79 HVCRLLGICLTS---TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 135
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP--EFMAPE-L 252
++HRDL N+ V VKI D GLA + ++ + G ++MA E +
Sbjct: 136 DRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 253 YEEEYNELVDIYSFGMCILEMVTF 276
Y D++S+G+ + E++TF
Sbjct: 193 LHRIYTHQSDVWSYGVTVWELMTF 216
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 78 YVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQK--LYSEVHLLKSL 135
Y E LG G F V K ++ G++ A +K + + + EV +LK +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVY 195
+ NV+ ++ + + K V +I EL G L + + +++ + + +QIL+G+ Y
Sbjct: 72 QHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 196 LHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIGTPEFMAPE 251
LHS I H DLK +NI + N +KI D GLA + +++ GTPEF+APE
Sbjct: 130 LHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 252 LYEEEYNEL-VDIYSFGMCILEMVTFEYPY 280
+ E L D++S G+ +++ P+
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 83 EVLGKGAFKTVYKAF----DEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDD 138
+VLG GAF TVYK E I VA ++ P +++ E +++ S+ +
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS---PKANKEILDEAYVMASVDNP 80
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLVYLH 197
+V + + TV +I +L G L Y ++HK N+ + + NW QI G+ YL
Sbjct: 81 HVCRLLGICLTS---TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP--EFMAPE-L 252
++HRDL N+ V VKI D GLA + ++ + G ++MA E +
Sbjct: 138 DRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 253 YEEEYNELVDIYSFGMCILEMVTF 276
Y D++S+G+ + E++TF
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTF 218
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 100/202 (49%), Gaps = 15/202 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQL--PGDLQKLYSEVHLLKSLKDDNV 140
+VLG GAF TVYK G +V V I ++ + P +++ E +++ S+ + +V
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVDNPHV 86
Query: 141 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLVYLHSH 199
+ + TV +IT+L G L Y ++HK N+ + + NW QI G+ YL
Sbjct: 87 CRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 143
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP--EFMAPE-LYE 254
++HRDL N+ V VKI D G A + ++ + G ++MA E +
Sbjct: 144 R--LVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 255 EEYNELVDIYSFGMCILEMVTF 276
Y D++S+G+ + E++TF
Sbjct: 201 RIYTHQSDVWSYGVTVWELMTF 222
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 83 EVLGKGAFKTVYKAF----DEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDD 138
+VL GAF TVYK E I VA ++ P +++ E +++ S+ +
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS---PKANKEILDEAYVMASVDNP 84
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLVYLH 197
+V + + TV +IT+L G L Y ++HK N+ + + NW QI G+ YL
Sbjct: 85 HVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP--EFMAPE-L 252
++HRDL N+ V VKI D GLA + ++ + G ++MA E +
Sbjct: 142 DRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 253 YEEEYNELVDIYSFGMCILEMVTF 276
Y D++S+G+ + E++TF
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTF 222
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 121/275 (44%), Gaps = 19/275 (6%)
Query: 80 RYDEV--LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKD 137
RY ++ +G GA V AFD GI VA K+ Q ++ Y E+ LLK +
Sbjct: 23 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVK--KLSRPFQNQTHAKRAYRELVLLKCVNH 80
Query: 138 DNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGL 193
N++ + K + V ++ EL NL Q H +D + + Q+L G+
Sbjct: 81 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQV--IHMELDHERMSYLLYQMLCGI 137
Query: 194 VYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-IAMQQPTARSVIGTPEFMAPE- 251
+LHS IIHRDLK NI V + +KI D GLA A + T + APE
Sbjct: 138 KHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLARTASTNFMMTPYVVTRYYRAPEV 194
Query: 252 LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTS-GIKPASLAKVNDPQI 310
+ Y E VDI+S G + E+V + + Q K + G A P +
Sbjct: 195 ILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTV 254
Query: 311 KGFIEKCLVPASERLSAKDLLKDPFLQVENQKEPI 345
+ ++E PA ++ ++L D E++++ I
Sbjct: 255 RNYVEN--RPAYPGIAFEELFPDWIFPSESERDKI 287
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 132/282 (46%), Gaps = 31/282 (10%)
Query: 57 LGTAEPPDAD-SDFVEKDPSGRYVRYDEVLGKGAFKTV----YKAFDEFAGIEVAWSRVK 111
LG + P A SDF + +V+GKG+F V +KA + F ++V +
Sbjct: 27 LGPSSNPHAKPSDF----------HFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKA- 75
Query: 112 IDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYR 171
+L+ + + LLK++K +V + S+ K + + + G L +
Sbjct: 76 ---ILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADK--LYFVLDYINGGELFYHL 130
Query: 172 KKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAI 231
++ + + +A +I L YLHS N I++RDLK +NI ++ + G + + D GL
Sbjct: 131 QRERCFLEPRARFYAAEIASALGYLHSLN--IVYRDLKPENILLD-SQGHIVLTDFGLCK 187
Query: 232 AM--QQPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQ 288
T + GTPE++APE L+++ Y+ VD + G + EM+ + P +N A+
Sbjct: 188 ENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML-YGLPPFYSRNTAE 246
Query: 289 IFKKVTSGIKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKD 329
++ + + KP L + +E L ++RL AKD
Sbjct: 247 MYDNILN--KPLQLKPNITNSARHLLEGLLQKDRTKRLGAKD 286
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 83 EVLGKGAFKTVYKAF----DEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDD 138
+VLG GAF TVYK E I VA ++ P +++ E +++ S+ +
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS---PKANKEILDEAYVMASVDNP 77
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLVYLH 197
+V + + TV +I +L G L Y ++HK N+ + + NW QI G+ YL
Sbjct: 78 HVCRLLGICLTS---TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP--EFMAPE-L 252
++HRDL N+ V VKI D GLA + ++ + G ++MA E +
Sbjct: 135 DRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 253 YEEEYNELVDIYSFGMCILEMVTF 276
Y D++S+G+ + E++TF
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTF 215
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 100/202 (49%), Gaps = 15/202 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQL--PGDLQKLYSEVHLLKSLKDDNV 140
+VLG GAF TVYK G +V V I ++ + P +++ E +++ S+ + +V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 141 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLVYLHSH 199
+ + TV +IT+L G L Y ++HK N+ + + NW QI G+ YL
Sbjct: 80 CRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP--EFMAPE-LYE 254
++HRDL N+ V VKI D G A + ++ + G ++MA E +
Sbjct: 137 R--LVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 255 EEYNELVDIYSFGMCILEMVTF 276
Y D++S+G+ + E++TF
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTF 215
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 83 EVLGKGAFKTVYKAF----DEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDD 138
+VL GAF TVYK E I VA ++ P +++ E +++ S+ +
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS---PKANKEILDEAYVMASVDNP 77
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLVYLH 197
+V + + TV +IT+L G L Y ++HK N+ + + NW QI G+ YL
Sbjct: 78 HVCRLLGICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP--EFMAPE-L 252
++HRDL N+ V VKI D GLA + ++ + G ++MA E +
Sbjct: 135 DRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 253 YEEEYNELVDIYSFGMCILEMVTF 276
Y D++S+G+ + E++TF
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTF 215
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 16/213 (7%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G + VY+ + + VA +K D + ++++ E ++K +K N+V+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVDIKVIKNWARQILHGLVYLHSHNPP 202
V ++ +ITE T GNL Y ++ + V V+ A QI + YL N
Sbjct: 74 G--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-- 129
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP---EFMAPE-LYEEEYN 258
IHRDL N V NH VK+ D GL+ M T + G ++ APE L +++
Sbjct: 130 FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 259 ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFK 291
D+++FG+ + E+ T+ +P+Q+++
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYE 221
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 15/258 (5%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+ LG+GA+ V A + VA V + + P +++K E+ + K L +NVVK
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 69
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPP 202
FY + + + E + G L + + + + Q++ G+VYLH
Sbjct: 70 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVI----GTPEFMAPELYE--EE 256
I HRD+K +N+ ++ +KI D GLA + ++ GT ++APEL + E
Sbjct: 126 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 257 YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEK 316
+ E VD++S G+ + M+ E P+ + + Q + + K D + K
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 244
Query: 317 CLVP-ASERLSAKDLLKD 333
LV S R++ D+ KD
Sbjct: 245 ILVENPSARITIPDIKKD 262
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 15/258 (5%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+ LG+GA+ V A + VA V + + P +++K E+ + K L +NVVK
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 68
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPP 202
FY + + + E + G L + + + + Q++ G+VYLH
Sbjct: 69 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVI----GTPEFMAPELYE--EE 256
I HRD+K +N+ ++ +KI D GLA + ++ GT ++APEL + E
Sbjct: 125 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 257 YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEK 316
+ E VD++S G+ + M+ E P+ + + Q + + K D + K
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 317 CLVP-ASERLSAKDLLKD 333
LV S R++ D+ KD
Sbjct: 244 ILVENPSARITIPDIKKD 261
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G + VY+ + + VA +K D + ++++ E ++K +K N+V+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVDIKVIKNWARQILHGLVYLHSHNPP 202
V ++ +ITE T GNL Y ++ + V+ V+ A QI + YL N
Sbjct: 81 G--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-- 136
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP---EFMAPE-LYEEEYN 258
IHRDL N V NH VK+ D GL+ M T + G ++ APE L +++
Sbjct: 137 FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 259 ELVDIYSFGMCILEMVTF 276
D+++FG+ + E+ T+
Sbjct: 196 IKSDVWAFGVLLWEIATY 213
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 109/262 (41%), Gaps = 33/262 (12%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG+G+F V++ D+ G + A +V+++ E+ L +V Y
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRA---------EELMACAGLTSPRIVPLY 151
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ + VN+ EL G+L Q K+ + + Q L GL YLHS I+
Sbjct: 152 GAVREGP--WVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRR--IL 207
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP-------TARSVIGTPEFMAPE-LYEEE 256
H D+K DN+ ++ + + D G A+ +Q T + GT MAPE +
Sbjct: 208 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRS 267
Query: 257 YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEK 316
+ VD++S +L M+ +P++ Q F+ P L ++P I
Sbjct: 268 CDAKVDVWSSCCMMLHMLNGCHPWT------QFFR------GPLCLKIASEPPPVREIPP 315
Query: 317 CLVPASERLSAKDLLKDPFLQV 338
P + + + L K+P +V
Sbjct: 316 SCAPLTAQAIQEGLRKEPIHRV 337
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 25/219 (11%)
Query: 73 DPSGRYVRYD---------EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQ 123
DPS Y +++ LG G + VY+ + + VA +K D + +++
Sbjct: 4 DPSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVE 58
Query: 124 KLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVDIKV 181
+ E ++K +K N+V+ V ++ +ITE T GNL Y ++ + V+ V
Sbjct: 59 EFLKEAAVMKEIKHPNLVQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 116
Query: 182 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV 241
+ A QI + YL N IHRDL N V NH VK+ D GL+ M T +
Sbjct: 117 LLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAH 173
Query: 242 IGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 276
G ++ APE L +++ D+++FG+ + E+ T+
Sbjct: 174 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 212
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G + VY+ + + VA +K D + ++++ E ++K +K N+V+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVDIKVIKNWARQILHGLVYLHSHNPP 202
V ++ +ITE T GNL Y ++ + V+ V+ A QI + YL N
Sbjct: 81 G--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-- 136
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP---EFMAPE-LYEEEYN 258
IHRDL N V NH VK+ D GL+ M T + G ++ APE L +++
Sbjct: 137 FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 259 ELVDIYSFGMCILEMVTF 276
D+++FG+ + E+ T+
Sbjct: 196 IKSDVWAFGVLLWEIATY 213
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G + VY+ + + VA +K D + ++++ E ++K +K N+V+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVDIKVIKNWARQILHGLVYLHSHNPP 202
V ++ +ITE T GNL Y ++ + V+ V+ A QI + YL N
Sbjct: 77 G--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-- 132
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP---EFMAPE-LYEEEYN 258
IHRDL N V NH VK+ D GL+ M T + G ++ APE L +++
Sbjct: 133 FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFS 191
Query: 259 ELVDIYSFGMCILEMVTF 276
D+++FG+ + E+ T+
Sbjct: 192 IKSDVWAFGVLLWEIATY 209
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 15/258 (5%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+ LG+GA+ V A + VA V + + P +++K E+ + K L +NVVK
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 69
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPP 202
FY + + + E + G L + + + + Q++ G+VYLH
Sbjct: 70 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVI----GTPEFMAPELYE--EE 256
I HRD+K +N+ ++ +KI D GLA + ++ GT ++APEL + E
Sbjct: 126 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 257 YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEK 316
+ E VD++S G+ + M+ E P+ + + Q + + K D + K
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 244
Query: 317 CLVP-ASERLSAKDLLKD 333
LV S R++ D+ KD
Sbjct: 245 ILVENPSARITIPDIKKD 262
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 15/258 (5%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+ LG+GA+ V A + VA V + + P +++K E+ + K L +NVVK
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 69
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPP 202
FY + + + E + G L + + + + Q++ G+VYLH
Sbjct: 70 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVI----GTPEFMAPELYE--EE 256
I HRD+K +N+ ++ +KI D GLA + ++ GT ++APEL + E
Sbjct: 126 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 257 YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEK 316
+ E VD++S G+ + M+ E P+ + + Q + + K D + K
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 244
Query: 317 CLVP-ASERLSAKDLLKD 333
LV S R++ D+ KD
Sbjct: 245 ILVENPSARITIPDIKKD 262
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 15/258 (5%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+ LG+GA+ V A + VA V + + P +++K E+ + K L +NVVK
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 69
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPP 202
FY + + + E + G L + + + + Q++ G+VYLH
Sbjct: 70 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVI----GTPEFMAPELYE--EE 256
I HRD+K +N+ ++ +KI D GLA + ++ GT ++APEL + E
Sbjct: 126 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 257 YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEK 316
+ E VD++S G+ + M+ E P+ + + Q + + K D + K
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 244
Query: 317 CLVP-ASERLSAKDLLKD 333
LV S R++ D+ KD
Sbjct: 245 ILVENPSARITIPDIKKD 262
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G + VY+ + + VA +K D + ++++ E ++K +K N+V+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVDIKVIKNWARQILHGLVYLHSHNPP 202
V ++ +ITE T GNL Y ++ + V+ V+ A QI + YL N
Sbjct: 81 G--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-- 136
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP---EFMAPE-LYEEEYN 258
IHRDL N V NH VK+ D GL+ M T + G ++ APE L +++
Sbjct: 137 FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 259 ELVDIYSFGMCILEMVTF 276
D+++FG+ + E+ T+
Sbjct: 196 IKSDVWAFGVLLWEIATY 213
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G + VY+ + + VA +K D + ++++ E ++K +K N+V+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVDIKVIKNWARQILHGLVYLHSHNPP 202
V ++ +ITE T GNL Y ++ + V+ V+ A QI + YL N
Sbjct: 78 G--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-- 133
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP---EFMAPE-LYEEEYN 258
IHRDL N V NH VK+ D GL+ M T + G ++ APE L +++
Sbjct: 134 FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFS 192
Query: 259 ELVDIYSFGMCILEMVTF 276
D+++FG+ + E+ T+
Sbjct: 193 IKSDVWAFGVLLWEIATY 210
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 109/262 (41%), Gaps = 33/262 (12%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG+G+F V++ D+ G + A +V+++ E+ L +V Y
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRA---------EELMACAGLTSPRIVPLY 132
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ + VN+ EL G+L Q K+ + + Q L GL YLHS I+
Sbjct: 133 GAVREGP--WVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRR--IL 188
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP-------TARSVIGTPEFMAPE-LYEEE 256
H D+K DN+ ++ + + D G A+ +Q T + GT MAPE +
Sbjct: 189 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRS 248
Query: 257 YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEK 316
+ VD++S +L M+ +P++ Q F+ P L ++P I
Sbjct: 249 CDAKVDVWSSCCMMLHMLNGCHPWT------QFFR------GPLCLKIASEPPPVREIPP 296
Query: 317 CLVPASERLSAKDLLKDPFLQV 338
P + + + L K+P +V
Sbjct: 297 SCAPLTAQAIQEGLRKEPIHRV 318
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 114/243 (46%), Gaps = 15/243 (6%)
Query: 82 DEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL-KDDNV 140
D ++GKG+F V KA+D +E W +KI + L + EV LL+ + K D
Sbjct: 59 DSLIGKGSFGQVVKAYDR---VEQEWVAIKI--IKNKKAFLNQAQIEVRLLELMNKHDTE 113
Query: 141 VKFYKSWVDDKKKTVNMITELFTSGNLRQY----RKKHKNVDIKVIKNWARQILHGLVYL 196
+K+Y + N + +F + Y + V + + + +A+Q+ L++L
Sbjct: 114 MKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL 173
Query: 197 HSHNPPIIHRDLKCDNIFV-NGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPE-LYE 254
+ IIH DLK +NI + N +KI D G + + Q + I + + +PE L
Sbjct: 174 ATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQX-IQSRFYRSPEVLLG 232
Query: 255 EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV-TSGIKPASLAKVNDPQIKGF 313
Y+ +D++S G ++EM T E +S Q+ K V GI PA + P+ + F
Sbjct: 233 MPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD-QAPKARKF 291
Query: 314 IEK 316
EK
Sbjct: 292 FEK 294
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 135/288 (46%), Gaps = 22/288 (7%)
Query: 69 FVEKDP-SGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYS 127
++E+ P + R VLGKG F V G A +++ + + G+ L +
Sbjct: 175 WLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMAL-N 233
Query: 128 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLR--QYRKKHKNVDIKVIKNW 185
E +L+ + VV ++ + K + ++ L G+L+ Y +
Sbjct: 234 EKQILEKVNSRFVVSL--AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM-QQPTARSVIGT 244
A +I GL LH I++RDLK +NI ++ +HG ++I DLGLA+ + + T + +GT
Sbjct: 292 AAEICCGLEDLHRER--IVYRDLKPENILLD-DHGHIRISDLGLAVHVPEGQTIKGRVGT 348
Query: 245 PEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIK--PAS 301
+MAPE+ + E Y D ++ G + EM+ + P+ + K + ++V +K P
Sbjct: 349 VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR-EEVERLVKEVPEE 407
Query: 302 LAKVNDPQIKGFIEK--CLVPASERL-----SAKDLLKDPFLQVENQK 342
++ PQ + + C PA ERL SA+++ + P + N K
Sbjct: 408 YSERFSPQARSLCSQLLCKDPA-ERLGCRGGSAREVKEHPLFKKLNFK 454
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 15/258 (5%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+ LG+GA+ V A + VA V + + P +++K E+ + K L +NVVK
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINKMLNHENVVK 68
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPP 202
FY + + + E + G L + + + + Q++ G+VYLH
Sbjct: 69 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVI----GTPEFMAPELYE--EE 256
I HRD+K +N+ ++ +KI D GLA + ++ GT ++APEL + E
Sbjct: 125 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 257 YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEK 316
+ E VD++S G+ + M+ E P+ + + Q + + K D + K
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 317 CLVP-ASERLSAKDLLKD 333
LV S R++ D+ KD
Sbjct: 244 ILVENPSARITIPDIKKD 261
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 15/258 (5%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+ LG+GA+ V A + VA V + + P +++K E+ + K L +NVVK
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINKMLNHENVVK 68
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPP 202
FY + + + E + G L + + + + Q++ G+VYLH
Sbjct: 69 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVI----GTPEFMAPELYE--EE 256
I HRD+K +N+ ++ +KI D GLA + ++ GT ++APEL + E
Sbjct: 125 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 257 YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEK 316
+ E VD++S G+ + M+ E P+ + + Q + + K D + K
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 317 CLVP-ASERLSAKDLLKD 333
LV S R++ D+ KD
Sbjct: 244 ILVENPSARITIPDIKKD 261
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 135/288 (46%), Gaps = 22/288 (7%)
Query: 69 FVEKDP-SGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYS 127
++E+ P + R VLGKG F V G A +++ + + G+ L +
Sbjct: 175 WLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMAL-N 233
Query: 128 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLR--QYRKKHKNVDIKVIKNW 185
E +L+ + VV ++ + K + ++ L G+L+ Y +
Sbjct: 234 EKQILEKVNSRFVVSL--AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM-QQPTARSVIGT 244
A +I GL LH I++RDLK +NI ++ +HG ++I DLGLA+ + + T + +GT
Sbjct: 292 AAEICCGLEDLHRER--IVYRDLKPENILLD-DHGHIRISDLGLAVHVPEGQTIKGRVGT 348
Query: 245 PEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIK--PAS 301
+MAPE+ + E Y D ++ G + EM+ + P+ + K + ++V +K P
Sbjct: 349 VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR-EEVERLVKEVPEE 407
Query: 302 LAKVNDPQIKGFIEK--CLVPASERL-----SAKDLLKDPFLQVENQK 342
++ PQ + + C PA ERL SA+++ + P + N K
Sbjct: 408 YSERFSPQARSLCSQLLCKDPA-ERLGCRGGSAREVKEHPLFKKLNFK 454
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 114/243 (46%), Gaps = 15/243 (6%)
Query: 82 DEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL-KDDNV 140
D ++GKG+F V KA+D +E W +KI + L + EV LL+ + K D
Sbjct: 40 DSLIGKGSFGQVVKAYDR---VEQEWVAIKI--IKNKKAFLNQAQIEVRLLELMNKHDTE 94
Query: 141 VKFYKSWVDDKKKTVNMITELFTSGNLRQY----RKKHKNVDIKVIKNWARQILHGLVYL 196
+K+Y + N + +F + Y + V + + + +A+Q+ L++L
Sbjct: 95 MKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL 154
Query: 197 HSHNPPIIHRDLKCDNIFV-NGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPE-LYE 254
+ IIH DLK +NI + N +KI D G + + Q + I + + +PE L
Sbjct: 155 ATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQX-IQSRFYRSPEVLLG 213
Query: 255 EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV-TSGIKPASLAKVNDPQIKGF 313
Y+ +D++S G ++EM T E +S Q+ K V GI PA + P+ + F
Sbjct: 214 MPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD-QAPKARKF 272
Query: 314 IEK 316
EK
Sbjct: 273 FEK 275
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 15/258 (5%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+ LG+GA+ V A + VA V + + P +++K E+ + K L +NVVK
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINKMLNHENVVK 69
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPP 202
FY + + E + G L + + + + Q++ G+VYLH
Sbjct: 70 FYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVI----GTPEFMAPELYE--EE 256
I HRD+K +N+ ++ +KI D GLA + ++ GT ++APEL + E
Sbjct: 126 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 184
Query: 257 YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEK 316
+ E VD++S G+ + M+ E P+ + + Q + + K D + K
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 244
Query: 317 CLVP-ASERLSAKDLLKD 333
LV S R++ D+ KD
Sbjct: 245 ILVENPSARITIPDIKKD 262
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 115/251 (45%), Gaps = 20/251 (7%)
Query: 53 LSGMLGTAEP------PDADSDFVEKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVA 106
+S + +A P PD D +D + + LG+GA VY+ + G +
Sbjct: 23 MSSVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQK--GTQKP 80
Query: 107 WSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGN 166
++ VL+ D + + +E+ +L L N++K + + + ++++ EL T G
Sbjct: 81 YAL----KVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKE--IFETPTEISLVLELVTGGE 134
Query: 167 LRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIF--VNGNHGEVKI 224
L + + + +QIL + YLH + I+HRDLK +N+ +KI
Sbjct: 135 LFDRIVEKGYYSERDAADAVKQILEAVAYLHENG--IVHRDLKPENLLYATPAPDAPLKI 192
Query: 225 GDLGLA-IAMQQPTARSVIGTPEFMAPELYEE-EYNELVDIYSFGMCILEMVTFEYPYSE 282
D GL+ I Q ++V GTP + APE+ Y VD++S G+ ++ P+ +
Sbjct: 193 ADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYD 252
Query: 283 CKNPAQIFKKV 293
+ +F+++
Sbjct: 253 ERGDQFMFRRI 263
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 18/227 (7%)
Query: 58 GTAEPPDADSDFVEKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
G+ E P+ + K+ + ++ VLG GAF TVYK G +V V I ++ +
Sbjct: 1 GSGEAPNQALLRILKETEFKKIK---VLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELRE 56
Query: 118 L--PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 175
P +++ E +++ S+ + +V + + TV +I +L G L Y ++HK
Sbjct: 57 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLIMQLMPFGCLLDYVREHK 113
Query: 176 -NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IA 232
N+ + + NW QI G+ YL ++HRDL N+ V VKI D G A +
Sbjct: 114 DNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGRAKLLG 170
Query: 233 MQQPTARSVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 276
++ + G ++MA E + Y D++S+G+ + E++TF
Sbjct: 171 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 217
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G + VY+ + + VA +K D + ++++ E ++K +K N+V+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVDIKVIKNWARQILHGLVYLHSHNPP 202
V ++ +ITE T GNL Y ++ + V+ V+ A QI + YL N
Sbjct: 78 G--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-- 133
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP---EFMAPE-LYEEEYN 258
IHRDL N V NH VK+ D GL+ M T + G ++ APE L +++
Sbjct: 134 FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 192
Query: 259 ELVDIYSFGMCILEMVTF 276
D+++FG+ + E+ T+
Sbjct: 193 IKSDVWAFGVLLWEIATY 210
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 18/227 (7%)
Query: 58 GTAEPPDADSDFVEKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ 117
G+ E P+ + K+ + ++ VLG GAF TVYK G +V V I ++ +
Sbjct: 1 GSGEAPNQALLRILKETEFKKIK---VLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELRE 56
Query: 118 L--PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 175
P +++ E +++ S+ + +V + + TV +I +L G L Y ++HK
Sbjct: 57 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---TVQLIMQLMPFGCLLDYVREHK 113
Query: 176 -NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IA 232
N+ + + NW QI G+ YL ++HRDL N+ V VKI D G A +
Sbjct: 114 DNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQ-HVKITDFGRAKLLG 170
Query: 233 MQQPTARSVIGTP--EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 276
++ + G ++MA E + Y D++S+G+ + E++TF
Sbjct: 171 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 217
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 16/198 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G + VY+ + + VA +K D + ++++ E ++K +K N+V+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVDIKVIKNWARQILHGLVYLHSHNPP 202
V ++ +ITE T GNL Y ++ + V V+ A QI + YL N
Sbjct: 81 G--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-- 136
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP---EFMAPE-LYEEEYN 258
IHRDL N V NH VK+ D GL+ M T + G ++ APE L +++
Sbjct: 137 FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 259 ELVDIYSFGMCILEMVTF 276
D+++FG+ + E+ T+
Sbjct: 196 IKSDVWAFGVLLWEIATY 213
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 15/258 (5%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+ LG+GA+ V A + VA V + + P +++K E+ + K L +NVVK
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 67
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPP 202
FY + + + E + G L + + + + Q++ G+VYLH
Sbjct: 68 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 123
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVI----GTPEFMAPELYE--EE 256
I HRD+K +N+ ++ +KI D GLA + ++ GT ++APEL + E
Sbjct: 124 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 182
Query: 257 YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEK 316
+ E VD++S G+ + M+ E P+ + + Q + + K D + K
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 242
Query: 317 CLVP-ASERLSAKDLLKD 333
LV S R++ D+ KD
Sbjct: 243 ILVENPSARITIPDIKKD 260
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 11/210 (5%)
Query: 78 YVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQK--LYSEVHLLKSL 135
Y E LG G F V K ++ G++ A +K + + + EV +LK +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVY 195
+ NV+ ++ + + K V +I EL G L + + +++ + + +QIL+G+ Y
Sbjct: 72 QHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 196 LHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIGTPEFMAPE 251
LHS I H DLK +NI + N +KI D GLA + +++ GTP F+APE
Sbjct: 130 LHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPE 187
Query: 252 LYEEEYNEL-VDIYSFGMCILEMVTFEYPY 280
+ E L D++S G+ +++ P+
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G + VY+ + + VA +K D + ++++ E ++K +K N+V+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVDIKVIKNWARQILHGLVYLHSHNPP 202
V ++ +ITE T GNL Y ++ + V+ V+ A QI + YL N
Sbjct: 76 G--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-- 131
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP---EFMAPE-LYEEEYN 258
IHRDL N V NH VK+ D GL+ M T + G ++ APE L +++
Sbjct: 132 FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 259 ELVDIYSFGMCILEMVTF 276
D+++FG+ + E+ T+
Sbjct: 191 IKSDVWAFGVLLWEIATY 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 15/258 (5%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+ LG+GA+ V A + VA V + + P +++K E+ + K L +NVVK
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 69
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPP 202
FY + + E + G L + + + + Q++ G+VYLH
Sbjct: 70 FYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVI----GTPEFMAPELYE--EE 256
I HRD+K +N+ ++ +KI D GLA + ++ GT ++APEL + E
Sbjct: 126 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 257 YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEK 316
+ E VD++S G+ + M+ E P+ + + Q + + K D + K
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 244
Query: 317 CLVP-ASERLSAKDLLKD 333
LV S R++ D+ KD
Sbjct: 245 ILVENPSARITIPDIKKD 262
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G + VY+ + + VA +K D + ++++ E ++K +K N+V+
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEIKHPNLVQLL 88
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVDIKVIKNWARQILHGLVYLHSHNPP 202
V ++ +ITE T GNL Y ++ + V+ V+ A QI + YL N
Sbjct: 89 G--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-- 144
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP---EFMAPE-LYEEEYN 258
IHRDL N V NH VK+ D GL+ M T + G ++ APE L +++
Sbjct: 145 FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 203
Query: 259 ELVDIYSFGMCILEMVTF 276
D+++FG+ + E+ T+
Sbjct: 204 IKSDVWAFGVLLWEIATY 221
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G + VY+ + + VA +K D + ++++ E ++K +K N+V+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVDIKVIKNWARQILHGLVYLHSHNPP 202
V ++ +ITE T GNL Y ++ + V+ V+ A QI + YL N
Sbjct: 78 G--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-- 133
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP---EFMAPE-LYEEEYN 258
IHRDL N V NH VK+ D GL+ M T + G ++ APE L +++
Sbjct: 134 FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 192
Query: 259 ELVDIYSFGMCILEMVTF 276
D+++FG+ + E+ T+
Sbjct: 193 IKSDVWAFGVLLWEIATY 210
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 15/258 (5%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+ LG+GA+ V A + VA V + + P +++K E+ + K L +NVVK
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 68
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPP 202
FY + + E + G L + + + + Q++ G+VYLH
Sbjct: 69 FYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVI----GTPEFMAPELYE--EE 256
I HRD+K +N+ ++ +KI D GLA + ++ GT ++APEL + E
Sbjct: 125 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 257 YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEK 316
+ E VD++S G+ + M+ E P+ + + Q + + K D + K
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 317 CLVP-ASERLSAKDLLKD 333
LV S R++ D+ KD
Sbjct: 244 ILVENPSARITIPDIKKD 261
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 15/258 (5%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+ LG+GA+ V A + VA V + + P +++K E+ + K L +NVVK
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 69
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPP 202
FY + + E + G L + + + + Q++ G+VYLH
Sbjct: 70 FYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVI----GTPEFMAPELYE--EE 256
I HRD+K +N+ ++ +KI D GLA + ++ GT ++APEL + E
Sbjct: 126 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 257 YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEK 316
+ E VD++S G+ + M+ E P+ + + Q + + K D + K
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 244
Query: 317 CLVP-ASERLSAKDLLKD 333
LV S R++ D+ KD
Sbjct: 245 ILVENPSARITIPDIKKD 262
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 15/258 (5%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+ LG+GA+ V A + VA V + + P +++K E+ + K L +NVVK
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 68
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPP 202
FY + + + E + G L + + + + Q++ G+VYLH
Sbjct: 69 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVI----GTPEFMAPELYE--EE 256
I HRD+K +N+ ++ +KI D GLA + ++ GT ++APEL + E
Sbjct: 125 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 257 YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEK 316
+ E VD++S G+ + M+ E P+ + + Q + + K D + K
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 317 CLVP-ASERLSAKDLLKD 333
LV S R++ D+ KD
Sbjct: 244 ILVENPSARITIPDIKKD 261
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G + VY+ + + VA +K D + ++++ E ++K +K N+V+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVDIKVIKNWARQILHGLVYLHSHNPP 202
V ++ +ITE T GNL Y ++ + V+ V+ A QI + YL N
Sbjct: 76 G--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-- 131
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP---EFMAPE-LYEEEYN 258
IHRDL N V NH VK+ D GL+ M T + G ++ APE L +++
Sbjct: 132 FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 259 ELVDIYSFGMCILEMVTF 276
D+++FG+ + E+ T+
Sbjct: 191 IKSDVWAFGVLLWEIATY 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 15/258 (5%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+ LG+GA+ V A + VA V + + P +++K E+ + K L +NVVK
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 68
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPP 202
FY + + E + G L + + + + Q++ G+VYLH
Sbjct: 69 FYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVI----GTPEFMAPELYE--EE 256
I HRD+K +N+ ++ +KI D GLA + ++ GT ++APEL + E
Sbjct: 125 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 257 YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEK 316
+ E VD++S G+ + M+ E P+ + + Q + + K D + K
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 317 CLVP-ASERLSAKDLLKD 333
LV S R++ D+ KD
Sbjct: 244 ILVENPSARITIPDIKKD 261
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 114/243 (46%), Gaps = 15/243 (6%)
Query: 82 DEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL-KDDNV 140
D ++GKG+F V KA+D +E W +KI + L + EV LL+ + K D
Sbjct: 59 DSLIGKGSFGQVVKAYDR---VEQEWVAIKI--IKNKKAFLNQAQIEVRLLELMNKHDTE 113
Query: 141 VKFYKSWVDDKKKTVNMITELFTSGNLRQY----RKKHKNVDIKVIKNWARQILHGLVYL 196
+K+Y + N + +F + Y + V + + + +A+Q+ L++L
Sbjct: 114 MKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL 173
Query: 197 HSHNPPIIHRDLKCDNIFV-NGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPE-LYE 254
+ IIH DLK +NI + N +KI D G + + Q + I + + +PE L
Sbjct: 174 ATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQX-IQSRFYRSPEVLLG 232
Query: 255 EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV-TSGIKPASLAKVNDPQIKGF 313
Y+ +D++S G ++EM T E +S Q+ K V GI PA + P+ + F
Sbjct: 233 MPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD-QAPKARKF 291
Query: 314 IEK 316
EK
Sbjct: 292 FEK 294
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 15/258 (5%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+ LG+GA+ V A + VA V + + P +++K E+ + K L +NVVK
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 68
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPP 202
FY + + + E + G L + + + + Q++ G+VYLH
Sbjct: 69 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVI----GTPEFMAPELYE--EE 256
I HRD+K +N+ ++ +KI D GLA + ++ GT ++APEL + E
Sbjct: 125 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 257 YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEK 316
+ E VD++S G+ + M+ E P+ + + Q + + K D + K
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 317 CLVP-ASERLSAKDLLKD 333
LV S R++ D+ KD
Sbjct: 244 ILVENPSARITIPDIKKD 261
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 15/258 (5%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+ LG+GA+ V A + VA V + + P +++K E+ + K L +NVVK
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 68
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPP 202
FY + + + E + G L + + + + Q++ G+VYLH
Sbjct: 69 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVI----GTPEFMAPELYE--EE 256
I HRD+K +N+ ++ +KI D GLA + ++ GT ++APEL + E
Sbjct: 125 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 257 YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEK 316
+ E VD++S G+ + M+ E P+ + + Q + + K D + K
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 317 CLVP-ASERLSAKDLLKD 333
LV S R++ D+ KD
Sbjct: 244 ILVENPSARITIPDIKKD 261
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 15/258 (5%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+ LG+GA+ V A + VA V + + P +++K E+ + K L +NVVK
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 68
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPP 202
FY + + E + G L + + + + Q++ G+VYLH
Sbjct: 69 FYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVI----GTPEFMAPELYE--EE 256
I HRD+K +N+ ++ +KI D GLA + ++ GT ++APEL + E
Sbjct: 125 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 257 YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEK 316
+ E VD++S G+ + M+ E P+ + + Q + + K D + K
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 317 CLVP-ASERLSAKDLLKD 333
LV S R++ D+ KD
Sbjct: 244 ILVENPSARITIPDIKKD 261
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 16/198 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G + VY+ + + VA +K D + ++++ E ++K +K N+V+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVDIKVIKNWARQILHGLVYLHSHNPP 202
V ++ +ITE T GNL Y ++ + V V+ A QI + YL N
Sbjct: 76 G--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-- 131
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP---EFMAPE-LYEEEYN 258
IHRDL N V NH VK+ D GL+ M T + G ++ APE L +++
Sbjct: 132 FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 259 ELVDIYSFGMCILEMVTF 276
D+++FG+ + E+ T+
Sbjct: 191 IKSDVWAFGVLLWEIATY 208
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 16/213 (7%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G + VY+ + + VA +K D + ++++ E ++K +K N+V+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVDIKVIKNWARQILHGLVYLHSHNPP 202
V ++ +I E T GNL Y ++ + V V+ A QI + YL N
Sbjct: 74 G--VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-- 129
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP---EFMAPE-LYEEEYN 258
IHRDL N V NH VK+ D GL+ M T + G ++ APE L +++
Sbjct: 130 FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 259 ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFK 291
D+++FG+ + E+ T+ +P+Q+++
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYE 221
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 100/228 (43%), Gaps = 34/228 (14%)
Query: 69 FVEKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSE 128
F+ + R + E +GKG + V++ + G VA VKI D + + E
Sbjct: 29 FLVQRTVARQITLLECVGKGRYGEVWRG--SWQGENVA---VKIFS----SRDEKSWFRE 79
Query: 129 VHLLKS--LKDDNVVKFYKSWVDDKKKTVNM--ITELFTSGNLRQYRKKHKNVDIKVIKN 184
L + L+ +N++ F S + + + + IT G+L Y + +D
Sbjct: 80 TELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL-TTLDTVSCLR 138
Query: 185 WARQILHGLVYLH------SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA 238
I GL +LH P I HRDLK NI V N G+ I DLGLA+ Q T
Sbjct: 139 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN-GQCCIADLGLAVMHSQSTN 197
Query: 239 R------SVIGTPEFMAPELYEEEYN-------ELVDIYSFGMCILEM 273
+ +GT +MAPE+ +E + VDI++FG+ + E+
Sbjct: 198 QLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 109/221 (49%), Gaps = 12/221 (5%)
Query: 67 SDFVEKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDL--QK 124
S F ++D Y E LG G F V K + G E A +K + + ++
Sbjct: 3 STFRQEDVEDHY-EMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREE 61
Query: 125 LYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKN 184
+ EV++L+ ++ N++ + + + K V +I EL + G L + + +++
Sbjct: 62 IEREVNILREIRHPNIITLHDIF--ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ 119
Query: 185 WARQILHGLVYLHSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RS 240
+ +QIL G+ YLHS I H DLK +NI + N + +K+ D G+A ++ ++
Sbjct: 120 FLKQILDGVHYLHSKR--IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN 177
Query: 241 VIGTPEFMAPELYEEEYNEL-VDIYSFGMCILEMVTFEYPY 280
+ GTPEF+APE+ E L D++S G+ +++ P+
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 16/198 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G + VY+ + + VA +K D + ++++ E ++K +K N+V+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVDIKVIKNWARQILHGLVYLHSHNPP 202
V ++ +ITE T GNL Y ++ + V V+ A QI + YL N
Sbjct: 76 G--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-- 131
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP---EFMAPE-LYEEEYN 258
IHRDL N V NH VK+ D GL+ M T + G ++ APE L +++
Sbjct: 132 FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 259 ELVDIYSFGMCILEMVTF 276
D+++FG+ + E+ T+
Sbjct: 191 IKSDVWAFGVLLWEIATY 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 15/258 (5%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+ LG+GA+ V A + VA V + + P +++K E+ + K L +NVVK
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 68
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPP 202
FY + + E + G L + + + + Q++ G+VYLH
Sbjct: 69 FYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVI----GTPEFMAPELYE--EE 256
I HRD+K +N+ ++ +KI D GLA + ++ GT ++APEL + E
Sbjct: 125 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 257 YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEK 316
+ E VD++S G+ + M+ E P+ + + Q + + K D + K
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 317 CLVP-ASERLSAKDLLKD 333
LV S R++ D+ KD
Sbjct: 244 ILVENPSARITIPDIKKD 261
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 15/258 (5%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+ LG+GA+ V A + VA V + + P +++K E+ + K L +NVVK
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 68
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPP 202
FY + + + E + G L + + + + Q++ G+VYLH
Sbjct: 69 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVI----GTPEFMAPELYE--EE 256
I HRD+K +N+ ++ +KI D GLA + ++ GT ++APEL + E
Sbjct: 125 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 257 YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEK 316
+ E VD++S G+ + M+ E P+ + + Q + + K D + K
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 317 CLVP-ASERLSAKDLLKD 333
LV S R++ D+ KD
Sbjct: 244 ILVENPSARITIPDIKKD 261
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 121/266 (45%), Gaps = 18/266 (6%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E LG GAF V++ + G A V + D + + E+ + L+ +V
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFV----MTPHESDKETVRKEIQTMSVLRHPTLVN 218
Query: 143 FYKSWVDDKKKTVNMITELFTSGNL-RQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
+ ++ DD + MI E + G L + +H + + RQ+ GL ++H +N
Sbjct: 219 LHDAFEDDNEMV--MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN- 275
Query: 202 PIIHRDLKCDNI-FVNGNHGEVKIGDLGLAIAMQ-QPTARSVIGTPEFMAPELYE-EEYN 258
+H DLK +NI F E+K+ D GL + + + + GT EF APE+ E +
Sbjct: 276 -YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVG 334
Query: 259 ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTS---GIKPASLAKVNDPQIKGFIE 315
D++S G+ +++ P+ +N + + V S + ++ + +++ K FI
Sbjct: 335 YYTDMWSVGVLSYILLSGLSPFG-GENDDETLRNVKSCDWNMDDSAFSGISE-DGKDFIR 392
Query: 316 KCLVP-ASERLSAKDLLKDPFLQVEN 340
K L+ + R++ L+ P+L N
Sbjct: 393 KLLLADPNTRMTIHQALEHPWLTPGN 418
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 19/204 (9%)
Query: 83 EVLGKGAFKTVYKAF----DEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDD 138
+VL GAF TVYK E I VA ++ P +++ E +++ S+ +
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS---PKANKEILDEAYVMASVDNP 84
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLVYLH 197
+V + + TV +I +L G L Y ++HK N+ + + NW QI G+ YL
Sbjct: 85 HVCRLLGICLTS---TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP--EFMAPE-L 252
++HRDL N+ V VKI D GLA + ++ + G ++MA E +
Sbjct: 142 DRR--LVHRDLAARNVLVKTPQ-HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 253 YEEEYNELVDIYSFGMCILEMVTF 276
Y D++S+G+ + E++TF
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTF 222
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 109/221 (49%), Gaps = 25/221 (11%)
Query: 79 VRYDEVLGKGAFKTVYKA-FDEFAGIEVAWSRVKIDDVLQLPGDL--QKLYSEVHLLKSL 135
++ ++ LG G F V+ A +++ + V + PG + + +E +++K+L
Sbjct: 190 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMK---------PGSMSVEAFLAEANVMKTL 240
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NWARQILHGL 193
+ D +VK + K+ + +ITE G+L + K + + K +++ QI G+
Sbjct: 241 QHDKLVKLHAVVT---KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGM 297
Query: 194 VYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ--QPTARSVIGTP-EFMAP 250
++ N IHRDL+ NI V+ + KI D GLA ++ + TAR P ++ AP
Sbjct: 298 AFIEQRN--YIHRDLRAANILVSASL-VCKIADFGLARVIEDNEYTAREGAKFPIKWTAP 354
Query: 251 ELYE-EEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 289
E + D++SFG+ ++E+VT+ PY NP I
Sbjct: 355 EAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 395
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQL--PGDLQKLYSEVHLLKSLKDDNV 140
+VLG GAF TVYK G +V V I ++ + P +++ E +++ S+ + +V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIP-VAIKELREATSPKANKEILDEAYVMASVDNPHV 83
Query: 141 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKVIKNWARQILHGLVYLHSH 199
+ + TV +I +L G L Y ++HK N+ + + NW QI G+ YL
Sbjct: 84 CRLLGICLTS---TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 140
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP--EFMAPE-LYE 254
++HRDL N+ V VKI D G A + ++ + G ++MA E +
Sbjct: 141 R--LVHRDLAARNVLVKTPQ-HVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 197
Query: 255 EEYNELVDIYSFGMCILEMVTF 276
Y D++S+G+ + E++TF
Sbjct: 198 RIYTHQSDVWSYGVTVWELMTF 219
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 134/269 (49%), Gaps = 19/269 (7%)
Query: 81 YD--EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDL--QKLYSEVHLLKSLK 136
YD E LG G F V K ++ G+E A +K + +++ EV +L+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYL 196
N++ + + + + V +I EL + G L + + +++ + ++ +QIL G+ YL
Sbjct: 74 HPNIITLHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYL 131
Query: 197 HSHNPPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIGTPEFMAPEL 252
H+ I H DLK +NI + N +K+ D GLA ++ +++ GTPEF+APE+
Sbjct: 132 HT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
Query: 253 YEEEYNEL-VDIYSFGMCILEMVTFEYPY---SECKNPAQIFKKVTSGIKPASLAKVNDP 308
E L D++S G+ +++ P+ ++ + A I V+ ++ ++
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI-TAVSYDFDEEFFSQTSEL 248
Query: 309 QIKGFIEKCLVPAS-ERLSAKDLLKDPFL 336
K FI K LV + +RL+ ++ L+ P++
Sbjct: 249 A-KDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 121/266 (45%), Gaps = 18/266 (6%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E LG GAF V++ + G A V + D + + E+ + L+ +V
Sbjct: 57 EELGTGAFGVVHRVTERATGNNFAAKFV----MTPHESDKETVRKEIQTMSVLRHPTLVN 112
Query: 143 FYKSWVDDKKKTVNMITELFTSGNL-RQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
+ ++ DD + MI E + G L + +H + + RQ+ GL ++H +N
Sbjct: 113 LHDAFEDDNEMV--MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN- 169
Query: 202 PIIHRDLKCDNI-FVNGNHGEVKIGDLGLAIAMQ-QPTARSVIGTPEFMAPELYE-EEYN 258
+H DLK +NI F E+K+ D GL + + + + GT EF APE+ E +
Sbjct: 170 -YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVG 228
Query: 259 ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTS---GIKPASLAKVNDPQIKGFIE 315
D++S G+ +++ P+ +N + + V S + ++ + +++ K FI
Sbjct: 229 YYTDMWSVGVLSYILLSGLSPFG-GENDDETLRNVKSCDWNMDDSAFSGISE-DGKDFIR 286
Query: 316 KCLVP-ASERLSAKDLLKDPFLQVEN 340
K L+ + R++ L+ P+L N
Sbjct: 287 KLLLADPNTRMTIHQALEHPWLTPGN 312
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 109/221 (49%), Gaps = 25/221 (11%)
Query: 79 VRYDEVLGKGAFKTVYKA-FDEFAGIEVAWSRVKIDDVLQLPGDL--QKLYSEVHLLKSL 135
++ ++ LG G F V+ A +++ + V + PG + + +E +++K+L
Sbjct: 17 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMK---------PGSMSVEAFLAEANVMKTL 67
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NWARQILHGL 193
+ D +VK + K+ + +ITE G+L + K + + K +++ QI G+
Sbjct: 68 QHDKLVKLHAV---VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGM 124
Query: 194 VYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ--QPTARSVIGTP-EFMAP 250
++ N IHRDL+ NI V+ + KI D GLA ++ + TAR P ++ AP
Sbjct: 125 AFIEQRN--YIHRDLRAANILVSASLV-CKIADFGLARVIEDNEYTAREGAKFPIKWTAP 181
Query: 251 ELYE-EEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 289
E + D++SFG+ ++E+VT+ PY NP I
Sbjct: 182 EAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 222
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G + VY+ + + VA +K D + ++++ E ++K +K N+V+
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEIKHPNLVQLL 321
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVDIKVIKNWARQILHGLVYLHSHNPP 202
V ++ +ITE T GNL Y ++ + V+ V+ A QI + YL N
Sbjct: 322 G--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-- 377
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP---EFMAPE-LYEEEYN 258
IHR+L N V NH VK+ D GL+ M T + G ++ APE L +++
Sbjct: 378 FIHRNLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 436
Query: 259 ELVDIYSFGMCILEMVTF 276
D+++FG+ + E+ T+
Sbjct: 437 IKSDVWAFGVLLWEIATY 454
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G + VY+ + + VA +K D + ++++ E ++K +K N+V+
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEIKHPNLVQLL 279
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVDIKVIKNWARQILHGLVYLHSHNPP 202
V ++ +ITE T GNL Y ++ + V+ V+ A QI + YL N
Sbjct: 280 G--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-- 335
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP---EFMAPE-LYEEEYN 258
IHR+L N V NH VK+ D GL+ M T + G ++ APE L +++
Sbjct: 336 FIHRNLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 394
Query: 259 ELVDIYSFGMCILEMVTF 276
D+++FG+ + E+ T+
Sbjct: 395 IKSDVWAFGVLLWEIATY 412
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 27/226 (11%)
Query: 80 RYDEV--LGKGAFKTVY----KAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLK 133
RYD V +G G F K E ++ ID+ +Q E+ +
Sbjct: 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQ---------REIINHR 71
Query: 134 SLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGL 193
SL+ N+V+F + + + +I E + G L + + + +Q+L G+
Sbjct: 72 SLRHPNIVRFKEVIL--TPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGV 129
Query: 194 VYLHSHNPPIIHRDLKCDNIFVNGNHG-EVKIGDLGL---AIAMQQPTARSVIGTPEFMA 249
Y HS I HRDLK +N ++G+ +KI D G ++ QP +S +GTP ++A
Sbjct: 130 SYCHSMQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP--KSTVGTPAYIA 185
Query: 250 PE-LYEEEYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 293
PE L +EY+ ++ D++S G+ + M+ YP+ + + P K +
Sbjct: 186 PEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTI 231
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 103/205 (50%), Gaps = 11/205 (5%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDL--QKLYSEVHLLKSLKDDNV 140
E LG G F V K + G E A +K + + +++ EV++L+ ++ N+
Sbjct: 32 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNI 91
Query: 141 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + + + K V +I EL + G L + + +++ + +QIL G+ YLHS
Sbjct: 92 ITLHDIF--ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKR 149
Query: 201 PPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIGTPEFMAPELYEEE 256
I H DLK +NI + N + +K+ D G+A ++ +++ GTPEF+APE+ E
Sbjct: 150 --IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYE 207
Query: 257 YNEL-VDIYSFGMCILEMVTFEYPY 280
L D++S G+ +++ P+
Sbjct: 208 PLGLEADMWSIGVITYILLSGASPF 232
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 16/198 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G + VY+ + + VA +K D + ++++ E ++K +K N+V+
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEIKHPNLVQLL 282
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVDIKVIKNWARQILHGLVYLHSHNPP 202
V ++ +ITE T GNL Y ++ + V V+ A QI + YL N
Sbjct: 283 G--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-- 338
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP---EFMAPE-LYEEEYN 258
IHR+L N V NH VK+ D GL+ M T + G ++ APE L +++
Sbjct: 339 FIHRNLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 397
Query: 259 ELVDIYSFGMCILEMVTF 276
D+++FG+ + E+ T+
Sbjct: 398 IKSDVWAFGVLLWEIATY 415
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 131/279 (46%), Gaps = 46/279 (16%)
Query: 83 EVLGKGAFKT-VYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLK-SLKDDNV 140
+VLG GA T VY+ F +VA R+ LP EV LL+ S + NV
Sbjct: 30 DVLGHGAEGTIVYRGM--FDNRDVAVKRI-------LPECFSFADREVQLLRESDEHPNV 80
Query: 141 VKFYKSWVDDKKKTVNMITELFTSGNLRQY--RKKHKNVDIKVIKNWARQILHGLVYLHS 198
++++ +K + I + L++Y +K ++ ++ I +Q GL +LHS
Sbjct: 81 IRYF---CTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPI-TLLQQTTSGLAHLHS 136
Query: 199 HNPPIIHRDLKCDNIFVN--GNHGEVK--IGDLG----LAIAMQQPTARS-VIGTPEFMA 249
N I+HRDLK NI ++ HG++K I D G LA+ + RS V GT ++A
Sbjct: 137 LN--IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIA 194
Query: 250 PELYEEEYNE----LVDIYSFGMCILEMVTFEYPYSECKNP--AQIFKKVTSGIKPASL- 302
PE+ E+ E VDI+S G C+ F Y SE +P + ++ + SL
Sbjct: 195 PEMLSEDCKENPTYTVDIFSAG-CV-----FYYVISEGSHPFGKSLQRQANILLGACSLD 248
Query: 303 ----AKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFL 336
K D + IEK + + +R SAK +LK PF
Sbjct: 249 CLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 16/198 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G + VY+ + + VA +K D + ++++ E ++K +K N+V+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVDIKVIKNWARQILHGLVYLHSHNPP 202
V ++ +I E T GNL Y ++ + V+ V+ A QI + YL N
Sbjct: 77 G--VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-- 132
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP---EFMAPE-LYEEEYN 258
IHRDL N V NH VK+ D GL+ M T + G ++ APE L +++
Sbjct: 133 FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFS 191
Query: 259 ELVDIYSFGMCILEMVTF 276
D+++FG+ + E+ T+
Sbjct: 192 IKSDVWAFGVLLWEIATY 209
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E LG G F V+ + + G ++V + + Q +E +L+K L+ +V+
Sbjct: 27 ERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 80
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NWARQILHGLVYLHSHN 200
Y ++ + +ITE +G+L + K + + + K + A QI G+ ++ N
Sbjct: 81 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 137
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE-LYEEE 256
IHRDL+ NI V+ KI D GLA I + TAR P ++ APE +
Sbjct: 138 --YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 194
Query: 257 YNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 289
+ D++SFG+ + E+VT PY NP I
Sbjct: 195 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 228
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 121/255 (47%), Gaps = 20/255 (7%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G F V+ + + ++V + + +Q E +L+K+L+ D +V+ Y
Sbjct: 20 LGAGQFGEVWMGYYNNS------TKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLY 73
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NWARQILHGLVYLHSHNPP 202
V K++ + +ITE G+L + K + + + K +++ QI G+ Y+ N
Sbjct: 74 A--VVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN-- 129
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ--QPTARSVIGTP-EFMAPELYE-EEYN 258
IHRDL+ N+ V+ + KI D GLA ++ + TAR P ++ APE +
Sbjct: 130 YIHRDLRAANVLVSESL-MCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFT 188
Query: 259 ELVDIYSFGMCILEMVTF-EYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKC 317
+++SFG+ + E+VT+ + PY N A + ++ G + + D ++ ++ C
Sbjct: 189 IKSNVWSFGILLYEIVTYGKIPYPGRTN-ADVMSALSQGYRMPRMENCPD-ELYDIMKMC 246
Query: 318 LVPASERLSAKDLLK 332
+E D L+
Sbjct: 247 WKEKAEERPTFDYLQ 261
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E LG G F V+ + + G ++V + + Q +E +L+K L+ +V+
Sbjct: 28 ERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 81
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NWARQILHGLVYLHSHN 200
Y ++ + +ITE +G+L + K + + + K + A QI G+ ++ N
Sbjct: 82 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 138
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE-LYEEE 256
IHRDL+ NI V+ KI D GLA I + TAR P ++ APE +
Sbjct: 139 --YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 195
Query: 257 YNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 289
+ D++SFG+ + E+VT PY NP I
Sbjct: 196 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 229
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 103/205 (50%), Gaps = 11/205 (5%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDL--QKLYSEVHLLKSLKDDNV 140
E LG G F V K + G E A +K + + +++ EV++L+ ++ N+
Sbjct: 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 70
Query: 141 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ + + + K V +I EL + G L + + +++ + +QIL G+ YLHS
Sbjct: 71 ITLHDIF--ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKR 128
Query: 201 PPIIHRDLKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA-RSVIGTPEFMAPELYEEE 256
I H DLK +NI + N + +K+ D G+A ++ +++ GTPEF+APE+ E
Sbjct: 129 --IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYE 186
Query: 257 YNEL-VDIYSFGMCILEMVTFEYPY 280
L D++S G+ +++ P+
Sbjct: 187 PLGLEADMWSIGVITYILLSGASPF 211
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E LG G F V+ + + G ++V + + Q +E +L+K L+ +V+
Sbjct: 25 ERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 78
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NWARQILHGLVYLHSHN 200
Y ++ + +ITE +G+L + K + + + K + A QI G+ ++ N
Sbjct: 79 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 135
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE-LYEEE 256
IHRDL+ NI V+ KI D GLA I + TAR P ++ APE +
Sbjct: 136 --YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 192
Query: 257 YNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 289
+ D++SFG+ + E+VT PY NP I
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 226
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 16/198 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G + VY+ + + VA +K D + ++++ E ++K +K N+V+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVDIKVIKNWARQILHGLVYLHSHNPP 202
V ++ +I E T GNL Y ++ + V+ V+ A QI + YL N
Sbjct: 81 G--VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-- 136
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP---EFMAPE-LYEEEYN 258
IHRDL N V NH VK+ D GL+ M T + G ++ APE L +++
Sbjct: 137 FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 259 ELVDIYSFGMCILEMVTF 276
D+++FG+ + E+ T+
Sbjct: 196 IKSDVWAFGVLLWEIATY 213
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E LG G F V+ + + G ++V + + Q +E +L+K L+ +V+
Sbjct: 19 ERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NWARQILHGLVYLHSHN 200
Y ++ + +ITE +G+L + K + + + K + A QI G+ ++ N
Sbjct: 73 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE-LYEEE 256
IHRDL+ NI V+ KI D GLA I + TAR P ++ APE +
Sbjct: 130 --YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 186
Query: 257 YNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 289
+ D++SFG+ + E+VT PY NP I
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 121/255 (47%), Gaps = 20/255 (7%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G F V+ + + ++V + + +Q E +L+K+L+ D +V+ Y
Sbjct: 21 LGAGQFGEVWMGYYNNS------TKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLY 74
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NWARQILHGLVYLHSHNPP 202
V +++ + +ITE G+L + K + + + K +++ QI G+ Y+ N
Sbjct: 75 A--VVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN-- 130
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ--QPTARSVIGTP-EFMAPELYEEE-YN 258
IHRDL+ N+ V+ + KI D GLA ++ + TAR P ++ APE +
Sbjct: 131 YIHRDLRAANVLVSESL-MCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFT 189
Query: 259 ELVDIYSFGMCILEMVTF-EYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKC 317
D++SFG+ + E+VT+ + PY N A + ++ G + + D ++ ++ C
Sbjct: 190 IKSDVWSFGILLYEIVTYGKIPYPGRTN-ADVMTALSQGYRMPRVENCPD-ELYDIMKMC 247
Query: 318 LVPASERLSAKDLLK 332
+E D L+
Sbjct: 248 WKEKAEERPTFDYLQ 262
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 112/256 (43%), Gaps = 47/256 (18%)
Query: 84 VLGKGAFKTVY----KAFDEFAGIEVAWSRVKIDD-----------VLQLPGD---LQKL 125
VLGKG+F V K DE +++ V I D VL LPG L +L
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 126 YSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNW 185
+S + L + E G+L + ++ +
Sbjct: 408 HSCFQTMDRL--------------------YFVMEYVNGGDLMYHIQQVGRFKEPHAVFY 447
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA--MQQPTARSVIG 243
A +I GL +L S II+RDLK DN+ ++ + G +KI D G+ T + G
Sbjct: 448 AAEIAIGLFFLQSKG--IIYRDLKLDNVMLD-SEGHIKIADFGMCKENIWDGVTTKXFCG 504
Query: 244 TPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG--IKPA 300
TP+++APE+ + Y + VD ++FG+ + EM+ + P+ E ++ ++F+ + P
Sbjct: 505 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF-EGEDEDELFQSIMEHNVAYPK 563
Query: 301 SLAKVNDPQIKGFIEK 316
S++K KG + K
Sbjct: 564 SMSKEAVAICKGLMTK 579
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 105/222 (47%), Gaps = 18/222 (8%)
Query: 81 YDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNV 140
+ EVLG GAF V+ G A +K + L +E+ +LK +K +N+
Sbjct: 13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSS----LENEIAVLKKIKHENI 68
Query: 141 VKFYKSWVDDKKKTVNMITELFTSGNLRQY---RKKHKNVDIKVIKNWARQILHGLVYLH 197
V + + ++ +L + G L R + D ++ +Q+L + YLH
Sbjct: 69 VTLED--IYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLV---IQQVLSAVKYLH 123
Query: 198 SHNPPIIHRDLKCDNIF--VNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPE-LYE 254
+ I+HRDLK +N+ + ++ I D GL+ Q + GTP ++APE L +
Sbjct: 124 ENG--IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQ 181
Query: 255 EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+ Y++ VD +S G+ ++ P+ E + +++F+K+ G
Sbjct: 182 KPYSKAVDCWSIGVITYILLCGYPPFYE-ETESKLFEKIKEG 222
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E LG G F V+ + + G ++V + + Q +E +L+K L+ +V+
Sbjct: 21 ERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 74
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NWARQILHGLVYLHSHN 200
Y ++ + +ITE +G+L + K + + + K + A QI G+ ++ N
Sbjct: 75 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 131
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE-LYEEE 256
IHRDL+ NI V+ KI D GLA I + TAR P ++ APE +
Sbjct: 132 --YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 188
Query: 257 YNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 289
+ D++SFG+ + E+VT PY NP I
Sbjct: 189 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 222
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 115/258 (44%), Gaps = 15/258 (5%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+ LG+GA+ V A + VA V + + P +++K E+ + L +NVVK
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINAMLNHENVVK 69
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPP 202
FY + + E + G L + + + + Q++ G+VYLH
Sbjct: 70 FYGH--RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVI----GTPEFMAPELYE--EE 256
I HRD+K +N+ ++ +KI D GLA + ++ GT ++APEL + E
Sbjct: 126 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 257 YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEK 316
+ E VD++S G+ + M+ E P+ + + Q + + K D + K
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 244
Query: 317 CLVP-ASERLSAKDLLKD 333
LV S R++ D+ KD
Sbjct: 245 ILVENPSARITIPDIKKD 262
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 112/242 (46%), Gaps = 19/242 (7%)
Query: 84 VLGKGAFKTVY----KAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDN 139
VLGKG+F V K +E I++ V I D D++ E +L L
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQD-----DDVECTMVEKRVLALLDKPP 80
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
+ S + + + E G+L + ++ +A +I GL +LH
Sbjct: 81 FLTQLHSCFQTVDR-LYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKR 139
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAI--AMQQPTARSVIGTPEFMAPELYE-EE 256
II+RDLK DN+ ++ + G +KI D G+ M T R GTP+++APE+ +
Sbjct: 140 G--IIYRDLKLDNVMLD-SEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQP 196
Query: 257 YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG--IKPASLAKVNDPQIKGFI 314
Y + VD +++G+ + EM+ + P+ + ++ ++F+ + P SL+K KG +
Sbjct: 197 YGKSVDWWAYGVLLYEMLAGQPPF-DGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLM 255
Query: 315 EK 316
K
Sbjct: 256 TK 257
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 132/276 (47%), Gaps = 28/276 (10%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVK--IDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+G+GA+ +V K + +G +A R++ +D+ Q Q L +++S +V+
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQK----QLLMDLDVVMRSSDCPYIVQ 85
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH--- 199
FY + + + M EL ++ + Y+ + +D + + +I V +H
Sbjct: 86 FYGALFREGDCWICM--ELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE 143
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELYE---- 254
N IIHRD+K NI ++ G +K+ D G++ + A++ G +MAPE +
Sbjct: 144 NLKIIHRDIKPSNILLD-RSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSAS 202
Query: 255 -EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIK--PASLAKVND---- 307
+ Y+ D++S G+ + E+ T +PY + + +F ++T +K P L+ +
Sbjct: 203 RQGYDVRSDVWSLGITLYELATGRFPYPKWNS---VFDQLTQVVKGDPPQLSNSEEREFS 259
Query: 308 PQIKGFIEKCLVP-ASERLSAKDLLKDPFLQVENQK 342
P F+ CL S+R K+LLK PF+ + ++
Sbjct: 260 PSFINFVNLCLTKDESKRPKYKELLKHPFILMYEER 295
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 78 YVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKD 137
++ + LG+G+F V++ D+ G + A +V+++ V ++ E+ L
Sbjct: 73 WMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRLE-VFRV--------EELVACAGLSS 123
Query: 138 DNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLH 197
+V Y + + VN+ EL G+L Q K+ + + Q L GL YLH
Sbjct: 124 PRIVPLYGAVREGP--WVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLH 181
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP-------TARSVIGTPEFMAP 250
+ I+H D+K DN+ ++ + + D G A+ +Q T + GT MAP
Sbjct: 182 TRR--ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAP 239
Query: 251 E-LYEEEYNELVDIYSFGMCILEMVTFEYPYSE 282
E + + + VDI+S +L M+ +P+++
Sbjct: 240 EVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ 272
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 15/258 (5%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+ LG+GA V A + VA V + + P +++K E+ + K L +NVVK
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVK 68
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPP 202
FY + + + E + G L + + + + Q++ G+VYLH
Sbjct: 69 FYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVI----GTPEFMAPELYE--EE 256
I HRD+K +N+ ++ +KI D GLA + ++ GT ++APEL + E
Sbjct: 125 ITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 257 YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEK 316
+ E VD++S G+ + M+ E P+ + + Q + + K D + K
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK 243
Query: 317 CLVP-ASERLSAKDLLKD 333
LV S R++ D+ KD
Sbjct: 244 ILVENPSARITIPDIKKD 261
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E LG G F V+ + + G ++V + + Q +E +L+K L+ +V+
Sbjct: 20 ERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 73
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NWARQILHGLVYLHSHN 200
Y ++ + +ITE +G+L + K + + + K + A QI G+ ++ N
Sbjct: 74 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 130
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE-LYEEE 256
IHRDL+ NI V+ KI D GLA I + TAR P ++ APE +
Sbjct: 131 --YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 187
Query: 257 YNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 289
+ D++SFG+ + E+VT PY NP I
Sbjct: 188 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 221
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E LG G F V+ + + G ++V + + Q +E +L+K L+ +V+
Sbjct: 19 ERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NWARQILHGLVYLHSHN 200
Y ++ + +ITE +G+L + K + + + K + A QI G+ ++ N
Sbjct: 73 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE-LYEEE 256
IHRDL+ NI V+ KI D GLA I + TAR P ++ APE +
Sbjct: 130 --YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 186
Query: 257 YNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 289
+ D++SFG+ + E+VT PY NP I
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 119/260 (45%), Gaps = 11/260 (4%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LGKG F VY A ++ + VA +V ++ G +L E+ + L N+++ Y
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVAL-KVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLY 89
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPII 204
+ D ++ + +I E G L + +K D + ++ L+Y H +I
Sbjct: 90 NYFYD--RRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKK--VI 145
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYE-EEYNELVDI 263
HRD+K +N+ + GE+KI D G ++ +++ GT +++ PE+ E +NE VD+
Sbjct: 146 HRDIKPENLLLGLK-GELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDL 204
Query: 264 YSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIK-PASLAKVNDPQIKGFIEKCLVPAS 322
+ G+ E++ P+ + + V +K PAS+ I + S
Sbjct: 205 WCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTGAQDLISKLLRH---NPS 261
Query: 323 ERLSAKDLLKDPFLQVENQK 342
ERL + P+++ +++
Sbjct: 262 ERLPLAQVSAHPWVRANSRR 281
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E LG G F V+ + + G ++V + + Q +E +L+K L+ +V+
Sbjct: 29 ERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 82
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NWARQILHGLVYLHSHN 200
Y ++ + +ITE +G+L + K + + + K + A QI G+ ++ N
Sbjct: 83 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 139
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE-LYEEE 256
IHRDL+ NI V+ KI D GLA I + TAR P ++ APE +
Sbjct: 140 --YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 196
Query: 257 YNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 289
+ D++SFG+ + E+VT PY NP I
Sbjct: 197 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 230
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 16/198 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G + VY+ + + VA +K D + ++++ E ++K +K N+V+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVDIKVIKNWARQILHGLVYLHSHNPP 202
V ++ +I E T GNL Y ++ + V V+ A QI + YL N
Sbjct: 76 G--VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-- 131
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP---EFMAPE-LYEEEYN 258
IHRDL N V NH VK+ D GL+ M T + G ++ APE L +++
Sbjct: 132 FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 259 ELVDIYSFGMCILEMVTF 276
D+++FG+ + E+ T+
Sbjct: 191 IKSDVWAFGVLLWEIATY 208
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E LG G F V+ + + G ++V + + Q +E +L+K L+ +V+
Sbjct: 24 ERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 77
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NWARQILHGLVYLHSHN 200
Y ++ + +ITE +G+L + K + + + K + A QI G+ ++ N
Sbjct: 78 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 134
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE-LYEEE 256
IHRDL+ NI V+ KI D GLA I + TAR P ++ APE +
Sbjct: 135 --YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 191
Query: 257 YNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 289
+ D++SFG+ + E+VT PY NP I
Sbjct: 192 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 225
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 112/256 (43%), Gaps = 47/256 (18%)
Query: 84 VLGKGAFKTVY----KAFDEFAGIEVAWSRVKIDD-----------VLQLPGD---LQKL 125
VLGKG+F V K DE +++ V I D VL LPG L +L
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 126 YSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNW 185
+S + L + E G+L + ++ +
Sbjct: 87 HSCFQTMDRL--------------------YFVMEYVNGGDLMYHIQQVGRFKEPHAVFY 126
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA--MQQPTARSVIG 243
A +I GL +L S II+RDLK DN+ ++ + G +KI D G+ T + G
Sbjct: 127 AAEIAIGLFFLQSKG--IIYRDLKLDNVMLD-SEGHIKIADFGMCKENIWDGVTTKXFCG 183
Query: 244 TPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG--IKPA 300
TP+++APE+ + Y + VD ++FG+ + EM+ + P+ E ++ ++F+ + P
Sbjct: 184 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF-EGEDEDELFQSIMEHNVAYPK 242
Query: 301 SLAKVNDPQIKGFIEK 316
S++K KG + K
Sbjct: 243 SMSKEAVAICKGLMTK 258
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 16/198 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G + VY+ + + VA +K D + ++++ E ++K +K N+V+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVDIKVIKNWARQILHGLVYLHSHNPP 202
V ++ +I E T GNL Y ++ + V V+ A QI + YL N
Sbjct: 76 G--VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-- 131
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP---EFMAPE-LYEEEYN 258
IHRDL N V NH VK+ D GL+ M T + G ++ APE L +++
Sbjct: 132 FIHRDLAARNCLVGENH-LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 259 ELVDIYSFGMCILEMVTF 276
D+++FG+ + E+ T+
Sbjct: 191 IKSDVWAFGVLLWEIATY 208
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E LG G F V+ + + G ++V + + Q +E +L+K L+ +V+
Sbjct: 25 ERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 78
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NWARQILHGLVYLHSHN 200
Y ++ + +ITE +G+L + K + + + K + A QI G+ ++ N
Sbjct: 79 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 135
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE-LYEEE 256
IHRDL+ NI V+ KI D GLA I + TAR P ++ APE +
Sbjct: 136 --YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 192
Query: 257 YNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 289
+ D++SFG+ + E+VT PY NP I
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 226
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 29/171 (16%)
Query: 127 SEVHLLKSLKDDNVVKFYKSWVDDKKKT-----VNMITELFTSGNLRQYRKKHKNVDIKV 181
+E++ ++ +N++ F + D K T + +IT+ +G+L Y K +D K
Sbjct: 80 TEIYQTVLMRHENILGFIAA---DIKGTGSWTQLYLITDYHENGSLYDYLKS-TTLDAKS 135
Query: 182 IKNWARQILHGLVYLHSH------NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 235
+ A + GL +LH+ P I HRDLK NI V N G I DLGLA+
Sbjct: 136 MLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVKFIS 194
Query: 236 PT------ARSVIGTPEFMAPELYEEEYNE-------LVDIYSFGMCILEM 273
T + +GT +M PE+ +E N + D+YSFG+ + E+
Sbjct: 195 DTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 95/214 (44%), Gaps = 34/214 (15%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKS--LKDDNV 140
E +GKG + V++ + G VA VKI D + + E L + L+ +N+
Sbjct: 14 ECVGKGRYGEVWRG--SWQGENVA---VKIFS----SRDEKSWFRETELYNTVMLRHENI 64
Query: 141 VKFYKSWVDDKKKTVNM--ITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLH- 197
+ F S + + + + IT G+L Y + +D I GL +LH
Sbjct: 65 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL-TTLDTVSCLRIVLSIASGLAHLHI 123
Query: 198 -----SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR------SVIGTPE 246
P I HRDLK NI V N G+ I DLGLA+ Q T + +GT
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKN-GQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 182
Query: 247 FMAPELYEEEYN-------ELVDIYSFGMCILEM 273
+MAPE+ +E + VDI++FG+ + E+
Sbjct: 183 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E LG G F V+ + + G ++V + + Q +E +L+K L+ +V+
Sbjct: 19 ERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NWARQILHGLVYLHSHN 200
Y ++ + +ITE +G+L + K + + + K + A QI G+ ++ N
Sbjct: 73 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE-LYEEE 256
IHRDL+ NI V+ KI D GLA I + TAR P ++ APE +
Sbjct: 130 --YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 186
Query: 257 YNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 289
+ D++SFG+ + E+VT PY NP I
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 95/214 (44%), Gaps = 34/214 (15%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKS--LKDDNV 140
E +GKG + V++ + G VA VKI D + + E L + L+ +N+
Sbjct: 14 ECVGKGRYGEVWRG--SWQGENVA---VKIFS----SRDEKSWFRETELYNTVMLRHENI 64
Query: 141 VKFYKSWVDDKKKTVNM--ITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLH- 197
+ F S + + + + IT G+L Y + +D I GL +LH
Sbjct: 65 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL-TTLDTVSCLRIVLSIASGLAHLHI 123
Query: 198 -----SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR------SVIGTPE 246
P I HRDLK NI V N G+ I DLGLA+ Q T + +GT
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKN-GQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 182
Query: 247 FMAPELYEEEYN-------ELVDIYSFGMCILEM 273
+MAPE+ +E + VDI++FG+ + E+
Sbjct: 183 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV--- 141
+G+GA+ V A+D + VA ++ + Q+ E+ +L + +N++
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 107
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
++ ++ K V ++T L + + + +H + D I + QIL GL Y+HS N
Sbjct: 108 DIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN- 164
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS-----VIGTPEFMAPE--LYE 254
++HRDLK N+ +N ++KI D GLA + + T + APE L
Sbjct: 165 -VLHRDLKPSNLLLNTT-XDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 222
Query: 255 EEYNELVDIYSFGMCILEMVT 275
+ Y + +DI+S G + EM++
Sbjct: 223 KGYTKSIDIWSVGCILAEMLS 243
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 129/304 (42%), Gaps = 60/304 (19%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V A D+ +G +VA K+ Q ++ Y E+ LLK ++ +NV+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIK--KLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 145 ---------KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVY 195
+++ D M T+L L+ +K I+ Q+L GL Y
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEK--------IQYLVYQMLKGLKY 141
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPE--LY 253
+HS ++HRDLK N+ VN + E+KI D GLA V+ T + APE L
Sbjct: 142 IHSAG--VVHRDLKPGNLAVNED-CELKILDFGLARHADAEMTGYVV-TRWYRAPEVILS 197
Query: 254 EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFK--KVTSGIKPASLAKVND---- 307
YN+ VDI+S G + EM+T + + Q+ + KVT + K+ND
Sbjct: 198 WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK 257
Query: 308 ----------------------PQIKGFIEKCL-VPASERLSAKDLLKDPFLQVENQKEP 344
PQ +EK L + +RL+A L PF EP
Sbjct: 258 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF------EP 311
Query: 345 ICDP 348
DP
Sbjct: 312 FRDP 315
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 103/213 (48%), Gaps = 21/213 (9%)
Query: 77 RYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLK 136
+Y + +G+G++ V A + I A ++ V D+ + E+ ++KSL
Sbjct: 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV----EDVDRFKQEIEIMKSLD 64
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV-----DIKVIKNWARQILH 191
N+++ Y+++ D+ + ++ EL T G L + R HK V +++K+ +L
Sbjct: 65 HPNIIRLYETFEDNTD--IYLVMELCTGGELFE-RVVHKRVFRESDAARIMKD----VLS 117
Query: 192 GLVYLHSHNPPIIHRDLKCDN--IFVNGNHGEVKIGDLGLAIAMQQ-PTARSVIGTPEFM 248
+ Y H N + HRDLK +N + +K+ D GLA + R+ +GTP ++
Sbjct: 118 AVAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYV 175
Query: 249 APELYEEEYNELVDIYSFGMCILEMVTFEYPYS 281
+P++ E Y D +S G+ + ++ P+S
Sbjct: 176 SPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFS 208
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E LG G F V+ + ++V + + Q +E +L+K L+ +V+
Sbjct: 14 ERLGAGQFGEVWMGYYN------GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 67
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NWARQILHGLVYLHSHN 200
Y ++ + +ITE +G+L + K + + + K + A QI G+ ++ N
Sbjct: 68 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 124
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE-LYEEE 256
IHRDL+ NI V+ KI D GLA I + TAR P ++ APE +
Sbjct: 125 --YIHRDLRAANILVSDTLS-CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 181
Query: 257 YNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 289
+ D++SFG+ + E+VT PY NP I
Sbjct: 182 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 215
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV--- 141
+G+GA+ V A+D + VA ++ + Q+ E+ +L + + +N++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLAFRHENIIGIN 89
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
++ ++ K V ++ +L + + + +H + D I + QIL GL Y+HS N
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN- 146
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS-----VIGTPEFMAPE--LYE 254
++HRDLK N+ +N ++KI D GLA + + T + APE L
Sbjct: 147 -VLHRDLKPSNLLLNTT-SDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 255 EEYNELVDIYSFGMCILEMVT 275
+ Y + +DI+S G + EM++
Sbjct: 205 KGYTKSIDIWSVGCILAEMLS 225
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 124/279 (44%), Gaps = 29/279 (10%)
Query: 71 EKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRV---KIDDVLQLPGDLQKLYS 127
EK+P + +LG G F +VY + VA V +I D +LP ++
Sbjct: 2 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 60
Query: 128 EVHLLKSLKD--DNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNW 185
EV LLK + V++ W + V ++ + +L + + + ++ +++
Sbjct: 61 EVVLLKKVSSGFSGVIRLL-DWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSF 119
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP 245
Q+L + H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT
Sbjct: 120 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 177
Query: 246 EFMAPEL--YEEEYNELVDIYSFGMCILEMVTFEYPYSECKN--PAQIF--KKVTSGIKP 299
+ PE Y + ++S G+ + +MV + P+ + Q+F ++V+S
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS---- 233
Query: 300 ASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQ 337
+ + I CL + S+R + +++ P++Q
Sbjct: 234 ---------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 263
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 78 YVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKD 137
++ + +G+G+F V++ D+ G + A +V+++ V ++ E+ L
Sbjct: 59 WMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLE-VFRV--------EELVACAGLSS 109
Query: 138 DNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLH 197
+V Y + + VN+ EL G+L Q K+ + + Q L GL YLH
Sbjct: 110 PRIVPLYGAVREGP--WVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLH 167
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP-------TARSVIGTPEFMAP 250
+ I+H D+K DN+ ++ + + D G A+ +Q T + GT MAP
Sbjct: 168 TRR--ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAP 225
Query: 251 E-LYEEEYNELVDIYSFGMCILEMVTFEYPYSE 282
E + + + VDI+S +L M+ +P+++
Sbjct: 226 EVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ 258
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 106/224 (47%), Gaps = 26/224 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDL--QKLYSEVHLLKSLKDDNVVK 142
LG G F V+ G ++V I + PG + + E ++K LK D +V+
Sbjct: 17 LGNGQFGEVW------MGTWNGNTKVAIKTLK--PGTMSPESFLEEAQIMKKLKHDKLVQ 68
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKV--IKNWARQILHGLVYLHSHN 200
Y ++ + ++TE G+L + K + +K+ + + A Q+ G+ Y+ N
Sbjct: 69 LYAVVSEE---PIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN 125
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE--LYEE 255
IHRDL+ NI V GN KI D GLA I + TAR P ++ APE LY
Sbjct: 126 --YIHRDLRSANILV-GNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGR 182
Query: 256 EYNELVDIYSFGMCILEMVT-FEYPYSECKNPAQIFKKVTSGIK 298
+ D++SFG+ + E+VT PY N ++ ++V G +
Sbjct: 183 -FTIKSDVWSFGILLTELVTKGRVPYPGMNN-REVLEQVERGYR 224
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 103/213 (48%), Gaps = 21/213 (9%)
Query: 77 RYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLK 136
+Y + +G+G++ V A + I A ++ V D+ + E+ ++KSL
Sbjct: 26 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV----EDVDRFKQEIEIMKSLD 81
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV-----DIKVIKNWARQILH 191
N+++ Y+++ D+ + ++ EL T G L + R HK V +++K+ +L
Sbjct: 82 HPNIIRLYETFEDNTD--IYLVMELCTGGELFE-RVVHKRVFRESDAARIMKD----VLS 134
Query: 192 GLVYLHSHNPPIIHRDLKCDN--IFVNGNHGEVKIGDLGLAIAMQ-QPTARSVIGTPEFM 248
+ Y H N + HRDLK +N + +K+ D GLA + R+ +GTP ++
Sbjct: 135 AVAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYV 192
Query: 249 APELYEEEYNELVDIYSFGMCILEMVTFEYPYS 281
+P++ E Y D +S G+ + ++ P+S
Sbjct: 193 SPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFS 225
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 27/220 (12%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G+G + VYKA + + ++ +I+ G E+ LL+ LK NV+
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGT----GISMSACREIALLRELKHPNVISLQ 84
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKKHK---------NVDIKVIKNWARQILHGLVY 195
K ++ + V ++ + + +L K H+ + ++K+ QIL G+ Y
Sbjct: 85 KVFLSHADRKVWLLFD-YAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHY 143
Query: 196 LHSHNPPIIHRDLKCDNIFVNG---NHGEVKIGDLGLAIAMQQPTA-----RSVIGTPEF 247
LH++ ++HRDLK NI V G G VKI D+G A P V+ T +
Sbjct: 144 LHANW--VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWY 201
Query: 248 MAPELY--EEEYNELVDIYSFGMCILEMVTFEYPYSECKN 285
APEL Y + +DI++ G E++T E P C+
Sbjct: 202 RAPELLLGARHYTKAIDIWAIGCIFAELLTSE-PIFHCRQ 240
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 105/217 (48%), Gaps = 12/217 (5%)
Query: 81 YDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNV 140
+ E LG GAF V A ++ G A VK L G + +E+ +L+ +K +N+
Sbjct: 26 FKETLGTGAFSEVVLAEEKATGKLFA---VKCIPKKALKGKESSIENEIAVLRKIKHENI 82
Query: 141 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
V + + + ++ +L + G L + K RQ+L + YLH
Sbjct: 83 VALED--IYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMG 140
Query: 201 PPIIHRDLKCDNI--FVNGNHGEVKIGDLGLA-IAMQQPTARSVIGTPEFMAPE-LYEEE 256
I+HRDLK +N+ + ++ I D GL+ + + + GTP ++APE L ++
Sbjct: 141 --IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKP 198
Query: 257 YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 293
Y++ VD +S G+ I ++ YP +N +++F+++
Sbjct: 199 YSKAVDCWSIGV-IAYILLCGYPPFYDENDSKLFEQI 234
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 136/302 (45%), Gaps = 50/302 (16%)
Query: 80 RYDEV--LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGD--LQKL-YSEVHLLKS 134
+Y+++ +G+G++ V+K + G VA I L+ D ++K+ E+ +LK
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVA-----IKKFLESEDDPVIKKIALREIRMLKQ 58
Query: 135 LKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLV 194
LK N+V + V +K+ ++++ E L + + + V ++K+ Q L +
Sbjct: 59 LKHPNLVNLLE--VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVN 116
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT--ARSVIGTPEFMAPEL 252
+ H HN IHRD+K +NI + H +K+ D G A + P+ + T + +PEL
Sbjct: 117 FCHKHN--CIHRDVKPENILIT-KHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPEL 173
Query: 253 Y--EEEYNELVDIYSFGMCILEMVTFE--YPYSECKNPAQIFKKVTSGIKPA-------- 300
+ +Y VD+++ G E+++ +P + + +K + P
Sbjct: 174 LVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTN 233
Query: 301 ---SLAKVNDPQ---------------IKGFIEKCL-VPASERLSAKDLLKDPFLQVENQ 341
S K+ DP+ G ++ CL + +ERL+ + LL P+ EN
Sbjct: 234 QYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYF--ENI 291
Query: 342 KE 343
+E
Sbjct: 292 RE 293
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 64/122 (52%), Gaps = 5/122 (4%)
Query: 177 VDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP 236
+ I+VIK + +L+ Y+H+ I HRD+K NI ++ N G VK+ D G + M
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNE-KNICHRDVKPSNILMDKN-GRVKLSDFGESEYMVDK 205
Query: 237 TARSVIGTPEFMAPELYEEE--YN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 293
+ GT EFM PE + E YN VDI+S G+C+ M P+S + ++F +
Sbjct: 206 KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNI 265
Query: 294 TS 295
+
Sbjct: 266 RT 267
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 125/285 (43%), Gaps = 51/285 (17%)
Query: 85 LGKGAFKTVYKAFDEFAGI------EVAWSRVKI--DDVLQLPGDLQKLYSEVHLLKSL- 135
LG+GAF V A E GI E VK+ DD + DL L SE+ ++K +
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATE--KDLSDLVSEMEMMKMIG 98
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY----------------RKKHKNVDI 179
K N++ + D V I E + GNLR+Y R + +
Sbjct: 99 KHKNIINLLGACTQDGPLYV--IVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTF 156
Query: 180 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-----IAMQ 234
K + + Q+ G+ YL S IHRDL N+ V N+ +KI D GLA I
Sbjct: 157 KDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMKIADFGLARDINNIDXX 213
Query: 235 QPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF---EYPYSECKNPAQIF 290
+ T + ++MAPE L++ Y D++SFG+ + E+ T YP + ++
Sbjct: 214 KKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 272
Query: 291 KKVTSGIKPASLAKVNDPQIKGFIEKCL--VPASERLSAKDLLKD 333
K+ KPA+ ++ + C VP S+R + K L++D
Sbjct: 273 KEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVED 312
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV--- 141
+G+GA+ V A+D + VA ++ + Q+ E+ +L + + +N++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLAFRHENIIGIN 89
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
++ ++ K V ++ +L + + + +H + D I + QIL GL Y+HS N
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN- 146
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS-----VIGTPEFMAPE--LYE 254
++HRDLK N+ +N ++KI D GLA + + T + APE L
Sbjct: 147 -VLHRDLKPSNLLLNTT-CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 255 EEYNELVDIYSFGMCILEMVT 275
+ Y + +DI+S G + EM++
Sbjct: 205 KGYTKSIDIWSVGCILAEMLS 225
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 78 YVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKD 137
++ + +G+G+F V++ D+ G + A +V+++ V ++ E+ L
Sbjct: 75 WMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLE-VFRV--------EELVACAGLSS 125
Query: 138 DNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLH 197
+V Y + + VN+ EL G+L Q K+ + + Q L GL YLH
Sbjct: 126 PRIVPLYGAVREGP--WVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLH 183
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP-------TARSVIGTPEFMAP 250
+ I+H D+K DN+ ++ + + D G A+ +Q T + GT MAP
Sbjct: 184 TRR--ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAP 241
Query: 251 E-LYEEEYNELVDIYSFGMCILEMVTFEYPYSE 282
E + + + VDI+S +L M+ +P+++
Sbjct: 242 EVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ 274
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 125/285 (43%), Gaps = 51/285 (17%)
Query: 85 LGKGAFKTVYKAFDEFAGI------EVAWSRVKI--DDVLQLPGDLQKLYSEVHLLKSL- 135
LG+GAF V A E GI E VK+ DD + DL L SE+ ++K +
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATE--KDLSDLVSEMEMMKMIG 98
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY----------------RKKHKNVDI 179
K N++ + D V I E + GNLR+Y R + +
Sbjct: 99 KHKNIINLLGACTQDGPLYV--IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 180 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-----IAMQ 234
K + + Q+ G+ YL S IHRDL N+ V N+ +KI D GLA I
Sbjct: 157 KDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMKIADFGLARDINNIDXX 213
Query: 235 QPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF---EYPYSECKNPAQIF 290
+ T + ++MAPE L++ Y D++SFG+ + E+ T YP + ++
Sbjct: 214 KKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 272
Query: 291 KKVTSGIKPASLAKVNDPQIKGFIEKCL--VPASERLSAKDLLKD 333
K+ KPA+ ++ + C VP S+R + K L++D
Sbjct: 273 KEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVED 312
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 31/212 (14%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G V+ A D VA ++ + D P ++ E+ +++ L DN+VK +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTD----PQSVKHALREIKIIRRLDHDNIVKVF 74
Query: 145 K-------SWVDDKKKTVNMITELFTSGNLRQYRKKH-KNV--DIKVIKNWAR----QIL 190
+ DD V +TEL + +++Y + NV +++ AR Q+L
Sbjct: 75 EILGPSGSQLTDD----VGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLL 130
Query: 191 HGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM-----QQPTARSVIGTP 245
GL Y+HS N ++HRDLK N+F+N +KIGD GLA M + + T
Sbjct: 131 RGLKYIHSAN--VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTK 188
Query: 246 EFMAPELY--EEEYNELVDIYSFGMCILEMVT 275
+ +P L Y + +D+++ G EM+T
Sbjct: 189 WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLT 220
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV--- 141
+G+GA+ V A+D + VA ++ + Q+ E+ +L + +N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
++ ++ K V ++ +L + + + +H + D I + QIL GL Y+HS N
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN- 148
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS-----VIGTPEFMAPE--LYE 254
++HRDLK N+ +N ++KI D GLA + + T + APE L
Sbjct: 149 -VLHRDLKPSNLLLNTT-CDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 206
Query: 255 EEYNELVDIYSFGMCILEMVT 275
+ Y + +DI+S G + EM++
Sbjct: 207 KGYTKSIDIWSVGCILAEMLS 227
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV--- 141
+G+GA+ V A+D + VA ++ + Q+ E+ +L + +N++
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 92
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
++ ++ K V ++ +L + + + +H + D I + QIL GL Y+HS N
Sbjct: 93 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN- 149
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS-----VIGTPEFMAPE--LYE 254
++HRDLK N+ +N ++KI D GLA + + T + APE L
Sbjct: 150 -VLHRDLKPSNLLLNTT-CDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 207
Query: 255 EEYNELVDIYSFGMCILEMVT 275
+ Y + +DI+S G + EM++
Sbjct: 208 KGYTKSIDIWSVGCILAEMLS 228
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 84 VLGKGAFKTVY----KAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDN 139
V+G+G++ V K D + V + DD D+ + +E H+ + +
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDD-----EDIDWVQTEKHVFEQASNHP 113
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
+ S + + + E G+L + ++ + + + + ++ +I L YLH
Sbjct: 114 FLVGLHSCFQTESRLF-FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 172
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE-EE 256
II+RDLK DN+ ++ + G +K+ D G+ +P T + GTP ++APE+ E+
Sbjct: 173 G--IIYRDLKLDNVLLD-SEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGED 229
Query: 257 YNELVDIYSFGMCILEMVTFEYPY---SECKNPAQ 288
Y VD ++ G+ + EM+ P+ NP Q
Sbjct: 230 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 264
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV--- 141
+G+GA+ V A+D + VA ++ + Q+ E+ +L + +N++
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 92
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
++ ++ K V ++ +L + + + +H + D I + QIL GL Y+HS N
Sbjct: 93 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN- 149
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS-----VIGTPEFMAPE--LYE 254
++HRDLK N+ +N ++KI D GLA + + T + APE L
Sbjct: 150 -VLHRDLKPSNLLLNTT-CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 207
Query: 255 EEYNELVDIYSFGMCILEMVT 275
+ Y + +DI+S G + EM++
Sbjct: 208 KGYTKSIDIWSVGCILAEMLS 228
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV--- 141
+G+GA+ V A+D + VA ++ + Q+ E+ +L + +N++
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 93
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
++ ++ K V ++ +L + + + +H + D I + QIL GL Y+HS N
Sbjct: 94 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN- 150
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS-----VIGTPEFMAPE--LYE 254
++HRDLK N+ +N ++KI D GLA + + T + APE L
Sbjct: 151 -VLHRDLKPSNLLLNTT-CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 208
Query: 255 EEYNELVDIYSFGMCILEMVT 275
+ Y + +DI+S G + EM++
Sbjct: 209 KGYTKSIDIWSVGCILAEMLS 229
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV--- 141
+G+GA+ V A+D + VA ++ + Q+ E+ +L + +N++
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 84
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
++ ++ K V ++ +L + + + +H + D I + QIL GL Y+HS N
Sbjct: 85 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN- 141
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS-----VIGTPEFMAPE--LYE 254
++HRDLK N+ +N ++KI D GLA + + T + APE L
Sbjct: 142 -VLHRDLKPSNLLLNTT-CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 199
Query: 255 EEYNELVDIYSFGMCILEMVT 275
+ Y + +DI+S G + EM++
Sbjct: 200 KGYTKSIDIWSVGCILAEMLS 220
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV--- 141
+G+GA+ V A+D + VA ++ + Q+ E+ +L + +N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
++ ++ K V ++ +L + + + +H + D I + QIL GL Y+HS N
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN- 148
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS-----VIGTPEFMAPE--LYE 254
++HRDLK N+ +N ++KI D GLA + + T + APE L
Sbjct: 149 -VLHRDLKPSNLLLNTT-CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 255 EEYNELVDIYSFGMCILEMVT 275
+ Y + +DI+S G + EM++
Sbjct: 207 KGYTKSIDIWSVGCILAEMLS 227
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV--- 141
+G+GA+ V A+D + VA ++ + Q+ E+ +L + +N++
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 85
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
++ ++ K V ++ +L + + + +H + D I + QIL GL Y+HS N
Sbjct: 86 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN- 142
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS-----VIGTPEFMAPE--LYE 254
++HRDLK N+ +N ++KI D GLA + + T + APE L
Sbjct: 143 -VLHRDLKPSNLLLNTT-CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 255 EEYNELVDIYSFGMCILEMVT 275
+ Y + +DI+S G + EM++
Sbjct: 201 KGYTKSIDIWSVGCILAEMLS 221
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV--- 141
+G+GA+ V A+D + VA ++ + Q+ E+ +L + +N++
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 85
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
++ ++ K V ++ +L + + + +H + D I + QIL GL Y+HS N
Sbjct: 86 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN- 142
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS-----VIGTPEFMAPE--LYE 254
++HRDLK N+ +N ++KI D GLA + + T + APE L
Sbjct: 143 -VLHRDLKPSNLLLNTT-CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 255 EEYNELVDIYSFGMCILEMVT 275
+ Y + +DI+S G + EM++
Sbjct: 201 KGYTKSIDIWSVGCILAEMLS 221
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV--- 141
+G+GA+ V A+D + VA ++ + Q+ E+ +L + +N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
++ ++ K V ++ +L + + + +H + D I + QIL GL Y+HS N
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN- 148
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS-----VIGTPEFMAPE--LYE 254
++HRDLK N+ +N ++KI D GLA + + T + APE L
Sbjct: 149 -VLHRDLKPSNLLLNTT-XDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 255 EEYNELVDIYSFGMCILEMVT 275
+ Y + +DI+S G + EM++
Sbjct: 207 KGYTKSIDIWSVGCILAEMLS 227
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 81 YDEVLGKGAFKTVY----KAFDEFAGIEVAWSRVKI--DDVLQLPGDLQKLYSEVH-LLK 133
Y ++LGKG F V KA + +++ V I D+V + + L + H L
Sbjct: 12 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT 71
Query: 134 SLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGL 193
+LK Y D+ + + E G L + + + + + + +I+ L
Sbjct: 72 ALK-------YAFQTHDR---LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL 121
Query: 194 VYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA--MQQPTARSVIGTPEFMAPE 251
YLHS + +++RD+K +N+ ++ + G +KI D GL T ++ GTPE++APE
Sbjct: 122 EYLHSRD--VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE 178
Query: 252 LYEE-EYNELVDIYSFGMCILEMVTFEYPY 280
+ E+ +Y VD + G+ + EM+ P+
Sbjct: 179 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV--- 141
+G+GA+ V A+D + VA ++ + Q+ E+ +L + +N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
++ ++ K V ++ +L + + + +H + D I + QIL GL Y+HS N
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN- 148
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS-----VIGTPEFMAPE--LYE 254
++HRDLK N+ +N ++KI D GLA + + T + APE L
Sbjct: 149 -VLHRDLKPSNLLLNTT-CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 255 EEYNELVDIYSFGMCILEMVT 275
+ Y + +DI+S G + EM++
Sbjct: 207 KGYTKSIDIWSVGCILAEMLS 227
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 17/232 (7%)
Query: 148 VDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRD 207
V D K V ++TEL G L + K + I + YLHS ++HRD
Sbjct: 89 VYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG--VVHRD 146
Query: 208 LKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA--RSVIGTPEFMAPELYEEE-YNELV 261
LK NI +GN ++I D G A ++ + T F+APE+ + + Y+E
Sbjct: 147 LKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGC 206
Query: 262 DIYSFGMCILEMVTFEYPYSE--CKNPAQIFKKVTSGIKPASLAKVN--DPQIKGFIEKC 317
DI+S G+ + M+ P++ P +I ++ SG S N K + K
Sbjct: 207 DIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKM 266
Query: 318 L-VPASERLSAKDLLKDPFLQVENQKEPICDPLKLPIQSLKMLRLPMSGPSS 368
L V +RL+AK +L+ P++ QK+ + +L Q L++++ M+ S
Sbjct: 267 LHVDPHQRLTAKQVLQHPWV---TQKDKLPQS-QLSHQDLQLVKGAMAATYS 314
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 128/304 (42%), Gaps = 60/304 (19%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA+ +V A D+ +G +VA K+ Q ++ Y E+ LLK ++ +NV+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIK--KLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 107
Query: 145 ---------KSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVY 195
+++ D M T+L + +K I+ Q+L GL Y
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEK--------IQYLVYQMLKGLKY 159
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPE--LY 253
+HS ++HRDLK N+ VN + E+KI D GLA V+ T + APE L
Sbjct: 160 IHSAG--VVHRDLKPGNLAVNED-CELKILDFGLARHADAEMTGYVV-TRWYRAPEVILS 215
Query: 254 EEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFK--KVTSGIKPASLAKVND---- 307
YN+ VDI+S G + EM+T + + Q+ + KVT + K+ND
Sbjct: 216 WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK 275
Query: 308 ----------------------PQIKGFIEKCL-VPASERLSAKDLLKDPFLQVENQKEP 344
PQ +EK L + +RL+A L PF EP
Sbjct: 276 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF------EP 329
Query: 345 ICDP 348
DP
Sbjct: 330 FRDP 333
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV--- 141
+G+GA+ V A+D + VA ++ + Q+ E+ +L + +N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYXQRTLREIKILLRFRHENIIGIN 91
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
++ ++ K V ++ +L + + + +H + D I + QIL GL Y+HS N
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN- 148
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS-----VIGTPEFMAPE--LYE 254
++HRDLK N+ +N ++KI D GLA + + T + APE L
Sbjct: 149 -VLHRDLKPSNLLLNTT-XDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 255 EEYNELVDIYSFGMCILEMVT 275
+ Y + +DI+S G + EM++
Sbjct: 207 KGYTKSIDIWSVGCILAEMLS 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV--- 141
+G+GA+ V A+D + VA ++ + Q+ E+ +L + +N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
++ ++ K V ++ +L + + + +H + D I + QIL GL Y+HS N
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN- 144
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS-----VIGTPEFMAPE--LYE 254
++HRDLK N+ +N ++KI D GLA + + T + APE L
Sbjct: 145 -VLHRDLKPSNLLLNTT-CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 255 EEYNELVDIYSFGMCILEMVT 275
+ Y + +DI+S G + EM++
Sbjct: 203 KGYTKSIDIWSVGCILAEMLS 223
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 81 YDEVLGKGAFKTVY----KAFDEFAGIEVAWSRVKI--DDVLQLPGDLQKLYSEVH-LLK 133
Y ++LGKG F V KA + +++ V I D+V + + L + H L
Sbjct: 9 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT 68
Query: 134 SLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGL 193
+LK Y D+ + + E G L + + + + + + +I+ L
Sbjct: 69 ALK-------YAFQTHDR---LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL 118
Query: 194 VYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA--MQQPTARSVIGTPEFMAPE 251
YLHS + +++RD+K +N+ ++ + G +KI D GL T ++ GTPE++APE
Sbjct: 119 EYLHSRD--VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE 175
Query: 252 LYEE-EYNELVDIYSFGMCILEMVTFEYPY 280
+ E+ +Y VD + G+ + EM+ P+
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV--- 141
+G+GA+ V A+D + VA ++ + Q+ E+ +L + +N++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 89
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
++ ++ K V ++ +L + + + +H + D I + QIL GL Y+HS N
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN- 146
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS-----VIGTPEFMAPE--LYE 254
++HRDLK N+ +N ++KI D GLA + + T + APE L
Sbjct: 147 -VLHRDLKPSNLLLNTT-CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 255 EEYNELVDIYSFGMCILEMVT 275
+ Y + +DI+S G + EM++
Sbjct: 205 KGYTKSIDIWSVGCILAEMLS 225
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 17/206 (8%)
Query: 79 VRYDEVLGKGAFKTVYKA-FDEFAG--IEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL 135
V + +LG+G F VY+ + G I VA K D L + +K SE ++K+L
Sbjct: 26 VVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLD---NKEKFMSEAVIMKNL 82
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKN-VDIKVIKNWARQILHGLV 194
++VK + +++ T +I EL+ G L Y +++KN + + + ++ QI +
Sbjct: 83 DHPHIVKLIG--IIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMA 139
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE 251
YL S N +HRD+ NI V VK+GD GL+ I + SV P ++M+PE
Sbjct: 140 YLESIN--CVHRDIAVRNILVASPEC-VKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 196
Query: 252 -LYEEEYNELVDIYSFGMCILEMVTF 276
+ + D++ F +C+ E+++F
Sbjct: 197 SINFRRFTTASDVWMFAVCMWEILSF 222
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 85/170 (50%), Gaps = 13/170 (7%)
Query: 127 SEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--N 184
+E +L+K L+ +V+ Y ++ + +ITE +G+L + K + + + K +
Sbjct: 57 AEANLMKQLQHQRLVRLYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 185 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ--QPTARSVI 242
A QI G+ ++ N IHRDL+ NI V+ KI D GLA ++ + TAR
Sbjct: 114 MAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLS-CKIADFGLARLIEDAEXTAREGA 170
Query: 243 GTP-EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 289
P ++ APE + + D++SFG+ + E+VT PY NP I
Sbjct: 171 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 81 YDEVLGKGAFKTVY----KAFDEFAGIEVAWSRVKI--DDVLQLPGDLQKLYSEVH-LLK 133
Y ++LGKG F V KA + +++ V I D+V + + L + H L
Sbjct: 9 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT 68
Query: 134 SLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGL 193
+LK Y D+ + + E G L + + + + + + +I+ L
Sbjct: 69 ALK-------YAFQTHDR---LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL 118
Query: 194 VYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA--MQQPTARSVIGTPEFMAPE 251
YLHS + +++RD+K +N+ ++ + G +KI D GL T ++ GTPE++APE
Sbjct: 119 EYLHSRD--VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE 175
Query: 252 LYEE-EYNELVDIYSFGMCILEMVTFEYPY 280
+ E+ +Y VD + G+ + EM+ P+
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV--- 141
+G+GA+ V A+D + VA ++ + Q+ E+ +L + +N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
++ ++ K V ++ +L + + + +H + D I + QIL GL Y+HS N
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN- 144
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS-----VIGTPEFMAPE--LYE 254
++HRDLK N+ +N ++KI D GLA + + T + APE L
Sbjct: 145 -VLHRDLKPSNLLLNTT-XDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 255 EEYNELVDIYSFGMCILEMVT 275
+ Y + +DI+S G + EM++
Sbjct: 203 KGYTKSIDIWSVGCILAEMLS 223
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV--- 141
+G+GA+ V A+D + VA ++ + Q+ E+ +L + +N++
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 95
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
++ ++ K V ++ +L + + + +H + D I + QIL GL Y+HS N
Sbjct: 96 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN- 152
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS-----VIGTPEFMAPE--LYE 254
++HRDLK N+ +N ++KI D GLA + + T + APE L
Sbjct: 153 -VLHRDLKPSNLLLNTT-CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 210
Query: 255 EEYNELVDIYSFGMCILEMVT 275
+ Y + +DI+S G + EM++
Sbjct: 211 KGYTKSIDIWSVGCILAEMLS 231
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV--- 141
+G+GA+ V A+D + VA ++ + Q+ E+ +L + +N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
++ ++ K V ++ +L + + + +H + D I + QIL GL Y+HS N
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN- 144
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS-----VIGTPEFMAPE--LYE 254
++HRDLK N+ +N ++KI D GLA + + T + APE L
Sbjct: 145 -VLHRDLKPSNLLLNTT-CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 255 EEYNELVDIYSFGMCILEMVT 275
+ Y + +DI+S G + EM++
Sbjct: 203 KGYTKSIDIWSVGCILAEMLS 223
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 125/285 (43%), Gaps = 51/285 (17%)
Query: 85 LGKGAFKTVYKAFDEFAGI------EVAWSRVKI--DDVLQLPGDLQKLYSEVHLLKSL- 135
LG+GAF V A E GI E VK+ DD + DL L SE+ ++K +
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATE--EDLSDLVSEMEMMKMIG 98
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY----------------RKKHKNVDI 179
K N++ + D V I E + GNLR+Y R + +
Sbjct: 99 KHKNIINLLGACTQDGPLYV--IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 180 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-----IAMQ 234
K + + Q+ G+ YL S IHRDL N+ V N+ +KI D GLA I
Sbjct: 157 KDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMKIADFGLARDINNIDYY 213
Query: 235 QPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF---EYPYSECKNPAQIF 290
+ T + ++MAPE L++ Y D++SFG+ + E+ T YP + ++
Sbjct: 214 KKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 272
Query: 291 KKVTSGIKPASLAKVNDPQIKGFIEKCL--VPASERLSAKDLLKD 333
K+ KPA+ ++ + C VP S+R + K L++D
Sbjct: 273 KEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVED 312
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV--- 141
+G+GA+ V A+D + VA ++ + Q+ E+ +L + +N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
++ ++ K V ++ +L + + + +H + D I + QIL GL Y+HS N
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSND--HICYFLYQILRGLKYIHSAN- 148
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS-----VIGTPEFMAPE--LYE 254
++HRDLK N+ +N ++KI D GLA + + T + APE L
Sbjct: 149 -VLHRDLKPSNLLLNTT-CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 255 EEYNELVDIYSFGMCILEMVT 275
+ Y + +DI+S G + EM++
Sbjct: 207 KGYTKSIDIWSVGCILAEMLS 227
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 125/285 (43%), Gaps = 51/285 (17%)
Query: 85 LGKGAFKTVYKAFDEFAGI------EVAWSRVKI--DDVLQLPGDLQKLYSEVHLLKSL- 135
LG+GAF V A E GI E VK+ DD + DL L SE+ ++K +
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATE--KDLSDLVSEMEMMKMIG 98
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY----------------RKKHKNVDI 179
K N++ + D V I E + GNLR+Y R + +
Sbjct: 99 KHKNIITLLGACTQDGPLYV--IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 180 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-----IAMQ 234
K + + Q+ G+ YL S IHRDL N+ V N+ +KI D GLA I
Sbjct: 157 KDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMKIADFGLARDINNIDYY 213
Query: 235 QPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF---EYPYSECKNPAQIF 290
+ T + ++MAPE L++ Y D++SFG+ + E+ T YP + ++
Sbjct: 214 KKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 272
Query: 291 KKVTSGIKPASLAKVNDPQIKGFIEKCL--VPASERLSAKDLLKD 333
K+ KPA+ ++ + C VP S+R + K L++D
Sbjct: 273 KEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVED 312
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 95/220 (43%), Gaps = 32/220 (14%)
Query: 76 GRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKS- 134
R V E +GKG + V++ + G VA VKI D Q + E + +
Sbjct: 7 ARQVALVECVGKGRYGEVWRGL--WHGESVA---VKIFS----SRDEQSWFRETEIYNTV 57
Query: 135 -LKDDNVVKFYKSWVDDKKKTVNM--ITELFTSGNL-----RQYRKKHKNVDIKVIKNWA 186
L+ DN++ F S + + + + IT G+L RQ + H + + V
Sbjct: 58 LLRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACG 117
Query: 187 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT------ARS 240
LH ++ P I HRD K N+ V N + I DLGLA+ Q +
Sbjct: 118 LAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNL-QCCIADLGLAVMHSQGSDYLDIGNNP 176
Query: 241 VIGTPEFMAPELYEE-------EYNELVDIYSFGMCILEM 273
+GT +MAPE+ +E E + DI++FG+ + E+
Sbjct: 177 RVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
E LG G F V+ + ++V + + Q +E +L+K L+ +V+
Sbjct: 15 ERLGAGQFGEVWMGYYN------GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 68
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NWARQILHGLVYLHSHN 200
Y ++ + +ITE +G+L + K + + + K + A QI G+ ++ N
Sbjct: 69 LYAV---VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 125
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE-LYEEE 256
IHR+L+ NI V+ KI D GLA I + TAR P ++ APE +
Sbjct: 126 --YIHRNLRAANILVSDTLS-CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 182
Query: 257 YNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 289
+ D++SFG+ + E+VT PY NP I
Sbjct: 183 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 216
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 125/285 (43%), Gaps = 51/285 (17%)
Query: 85 LGKGAFKTVYKAFDEFAGI------EVAWSRVKI--DDVLQLPGDLQKLYSEVHLLKSL- 135
LG+GAF V A E GI E VK+ DD + DL L SE+ ++K +
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATE--KDLSDLVSEMEMMKMIG 98
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY----------------RKKHKNVDI 179
K N++ + D V I E + GNLR+Y R + +
Sbjct: 99 KHKNIINLLGACTQDGPLYV--IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 180 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-----IAMQ 234
K + + Q+ G+ YL S IHRDL N+ V N+ +KI D GLA I
Sbjct: 157 KDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMKIADFGLARDINNIDYY 213
Query: 235 QPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF---EYPYSECKNPAQIF 290
+ T + ++MAPE L++ Y D++SFG+ + E+ T YP + ++
Sbjct: 214 KNTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 272
Query: 291 KKVTSGIKPASLAKVNDPQIKGFIEKCL--VPASERLSAKDLLKD 333
K+ KPA+ ++ + C VP S+R + K L++D
Sbjct: 273 KEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVED 312
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV--- 141
+G+GA+ V A+D + VA ++ + Q+ E+ +L + +N++
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 107
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
++ ++ K V ++ +L + + + +H + D I + QIL GL Y+HS N
Sbjct: 108 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN- 164
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS-----VIGTPEFMAPE--LYE 254
++HRDLK N+ +N ++KI D GLA + + T + APE L
Sbjct: 165 -VLHRDLKPSNLLLNTT-CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 222
Query: 255 EEYNELVDIYSFGMCILEMVT 275
+ Y + +DI+S G + EM++
Sbjct: 223 KGYTKSIDIWSVGCILAEMLS 243
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 17/206 (8%)
Query: 79 VRYDEVLGKGAFKTVYKA-FDEFAG--IEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL 135
V + +LG+G F VY+ + G I VA K D L + +K SE ++K+L
Sbjct: 14 VVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLD---NKEKFMSEAVIMKNL 70
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKN-VDIKVIKNWARQILHGLV 194
++VK + +++ T +I EL+ G L Y +++KN + + + ++ QI +
Sbjct: 71 DHPHIVKLIG--IIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMA 127
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE 251
YL S N +HRD+ NI V VK+GD GL+ I + SV P ++M+PE
Sbjct: 128 YLESIN--CVHRDIAVRNILVASPEC-VKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 184
Query: 252 -LYEEEYNELVDIYSFGMCILEMVTF 276
+ + D++ F +C+ E+++F
Sbjct: 185 SINFRRFTTASDVWMFAVCMWEILSF 210
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV--- 141
+G+GA+ V A+D + VA ++ + Q+ E+ +L + +N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
++ ++ K V ++ +L + + + +H + D I + QIL GL Y+HS N
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN- 144
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS-----VIGTPEFMAPE--LYE 254
++HRDLK N+ +N ++KI D GLA + + T + APE L
Sbjct: 145 -VLHRDLKPSNLLLNTT-XDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 255 EEYNELVDIYSFGMCILEMVT 275
+ Y + +DI+S G + EM++
Sbjct: 203 KGYTKSIDIWSVGCILAEMLS 223
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 125/285 (43%), Gaps = 51/285 (17%)
Query: 85 LGKGAFKTVYKAFDEFAGI------EVAWSRVKI--DDVLQLPGDLQKLYSEVHLLKSL- 135
LG+GAF V A E GI E VK+ DD + DL L SE+ ++K +
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATE--KDLSDLVSEMEMMKMIG 98
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY----------------RKKHKNVDI 179
K N++ + D V I E + GNLR+Y R + +
Sbjct: 99 KHKNIIHLLGACTQDGPLYV--IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 180 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-----IAMQ 234
K + + Q+ G+ YL S IHRDL N+ V N+ +KI D GLA I
Sbjct: 157 KDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMKIADFGLARDINNIDYY 213
Query: 235 QPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF---EYPYSECKNPAQIF 290
+ T + ++MAPE L++ Y D++SFG+ + E+ T YP + ++
Sbjct: 214 KKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 272
Query: 291 KKVTSGIKPASLAKVNDPQIKGFIEKCL--VPASERLSAKDLLKD 333
K+ KPA+ ++ + C VP S+R + K L++D
Sbjct: 273 KEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVED 312
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV--- 141
+G+GA+ V A+D + VA ++ + Q+ E+ +L + +N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKIS---PFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNP 201
++ ++ K V ++ +L + + + +H + D I + QIL GL Y+HS N
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICYFLYQILRGLKYIHSAN- 144
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS-----VIGTPEFMAPE--LYE 254
++HRDLK N+ +N ++KI D GLA + + T + APE L
Sbjct: 145 -VLHRDLKPSNLLLNTT-XDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 255 EEYNELVDIYSFGMCILEMVT 275
+ Y + +DI+S G + EM++
Sbjct: 203 KGYTKSIDIWSVGCILAEMLS 223
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 118/275 (42%), Gaps = 19/275 (6%)
Query: 80 RYDEV--LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKD 137
RY ++ +G GA V AFD GI VA K+ Q ++ Y E+ LLK +
Sbjct: 25 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVK--KLSRPFQNQTHAKRAYRELVLLKCVNH 82
Query: 138 DNVVKFYKSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGL 193
N++ + K + V ++ EL NL Q H +D + + Q+L G+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQV--IHMELDHERMSYLLYQMLCGI 139
Query: 194 VYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-IAMQQPTARSVIGTPEFMAPE- 251
+LHS IIHRDLK NI V + +KI D GLA A + T + APE
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLARTACTNFMMTPYVVTRYYRAPEV 196
Query: 252 LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTS-GIKPASLAKVNDPQI 310
+ Y VDI+S G + E+V + + Q K + G A P +
Sbjct: 197 ILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTV 256
Query: 311 KGFIEKCLVPASERLSAKDLLKDPFLQVENQKEPI 345
+ ++E P + ++L D E++++ I
Sbjct: 257 RNYVEN--RPKYPGIKFEELFPDWIFPSESERDKI 289
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 123/279 (44%), Gaps = 29/279 (10%)
Query: 71 EKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRV---KIDDVLQLPGDLQKLYS 127
EK+P + +LG G F +VY + VA V +I D +LP ++
Sbjct: 37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 95
Query: 128 EVHLLKSLKD--DNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNW 185
EV LLK + V++ W + V ++ +L + + + ++ +++
Sbjct: 96 EVVLLKKVSSGFSGVIRLL-DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 154
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP 245
Q+L + H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT
Sbjct: 155 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 212
Query: 246 EFMAPEL--YEEEYNELVDIYSFGMCILEMVTFEYPYSECKN--PAQIF--KKVTSGIKP 299
+ PE Y + ++S G+ + +MV + P+ + Q+F ++V+S
Sbjct: 213 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS---- 268
Query: 300 ASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQ 337
+ + I CL + S+R + +++ P++Q
Sbjct: 269 ---------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 298
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 123/279 (44%), Gaps = 29/279 (10%)
Query: 71 EKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRV---KIDDVLQLPGDLQKLYS 127
EK+P + +LG G F +VY + VA V +I D +LP ++
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 89
Query: 128 EVHLLKSLKD--DNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNW 185
EV LLK + V++ W + V ++ +L + + + ++ +++
Sbjct: 90 EVVLLKKVSSGFSGVIRLL-DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP 245
Q+L + H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT
Sbjct: 149 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 206
Query: 246 EFMAPEL--YEEEYNELVDIYSFGMCILEMVTFEYPYSECKN--PAQIF--KKVTSGIKP 299
+ PE Y + ++S G+ + +MV + P+ + Q+F ++V+S
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSS---- 262
Query: 300 ASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQ 337
+ + I CL + S+R + +++ P++Q
Sbjct: 263 ---------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 84 VLGKGAFKTVY----KAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDN 139
V+G+G++ V K D ++V + DD D+ + +E H+ + +
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDD-----EDIDWVQTEKHVFEQASNHP 81
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
+ S + + + E G+L + ++ + + + + ++ +I L YLH
Sbjct: 82 FLVGLHSCFQTESRLF-FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 140
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE-EE 256
II+RDLK DN+ ++ + G +K+ D G+ +P T GTP ++APE+ E+
Sbjct: 141 G--IIYRDLKLDNVLLD-SEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED 197
Query: 257 YNELVDIYSFGMCILEMVTFEYPY---SECKNPAQ 288
Y VD ++ G+ + EM+ P+ NP Q
Sbjct: 198 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 232
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 123/279 (44%), Gaps = 29/279 (10%)
Query: 71 EKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRV---KIDDVLQLPGDLQKLYS 127
EK+P + +LG G F +VY + VA V +I D +LP ++
Sbjct: 45 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 103
Query: 128 EVHLLKSLKD--DNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNW 185
EV LLK + V++ W + V ++ +L + + + ++ +++
Sbjct: 104 EVVLLKKVSSGFSGVIRLL-DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 162
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP 245
Q+L + H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT
Sbjct: 163 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 220
Query: 246 EFMAPEL--YEEEYNELVDIYSFGMCILEMVTFEYPYSECKN--PAQIF--KKVTSGIKP 299
+ PE Y + ++S G+ + +MV + P+ + Q+F ++V+S
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS---- 276
Query: 300 ASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQ 337
+ + I CL + S+R + +++ P++Q
Sbjct: 277 ---------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 17/206 (8%)
Query: 79 VRYDEVLGKGAFKTVYKA-FDEFAG--IEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL 135
V + +LG+G F VY+ + G I VA K D L + +K SE ++K+L
Sbjct: 10 VVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLD---NKEKFMSEAVIMKNL 66
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKN-VDIKVIKNWARQILHGLV 194
++VK + +++ T +I EL+ G L Y +++KN + + + ++ QI +
Sbjct: 67 DHPHIVKLIG--IIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMA 123
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE 251
YL S N +HRD+ NI V VK+GD GL+ I + SV P ++M+PE
Sbjct: 124 YLESIN--CVHRDIAVRNILVASPEC-VKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 180
Query: 252 -LYEEEYNELVDIYSFGMCILEMVTF 276
+ + D++ F +C+ E+++F
Sbjct: 181 SINFRRFTTASDVWMFAVCMWEILSF 206
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 123/279 (44%), Gaps = 29/279 (10%)
Query: 71 EKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRV---KIDDVLQLPGDLQKLYS 127
EK+P + +LG G F +VY + VA V +I D +LP ++
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 88
Query: 128 EVHLLKSLKD--DNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNW 185
EV LLK + V++ W + V ++ +L + + + ++ +++
Sbjct: 89 EVVLLKKVSSGFSGVIRLL-DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP 245
Q+L + H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT
Sbjct: 148 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 205
Query: 246 EFMAPEL--YEEEYNELVDIYSFGMCILEMVTFEYPYSECKN--PAQIF--KKVTSGIKP 299
+ PE Y + ++S G+ + +MV + P+ + Q+F ++V+S
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSS---- 261
Query: 300 ASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQ 337
+ + I CL + S+R + +++ P++Q
Sbjct: 262 ---------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 84 VLGKGAFKTVY----KAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDN 139
V+G+G++ V K D ++V + DD D+ + +E H+ + +
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDD-----EDIDWVQTEKHVFEQASNHP 66
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
+ S + + + E G+L + ++ + + + + ++ +I L YLH
Sbjct: 67 FLVGLHSCFQTESRLF-FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 125
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE-EE 256
II+RDLK DN+ ++ + G +K+ D G+ +P T GTP ++APE+ E+
Sbjct: 126 G--IIYRDLKLDNVLLD-SEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED 182
Query: 257 YNELVDIYSFGMCILEMVTFEYPY---SECKNPAQ 288
Y VD ++ G+ + EM+ P+ NP Q
Sbjct: 183 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 217
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 123/279 (44%), Gaps = 29/279 (10%)
Query: 71 EKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRV---KIDDVLQLPGDLQKLYS 127
EK+P + +LG G F +VY + VA V +I D +LP ++
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 89
Query: 128 EVHLLKSLKD--DNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNW 185
EV LLK + V++ W + V ++ +L + + + ++ +++
Sbjct: 90 EVVLLKKVSSGFSGVIRLL-DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP 245
Q+L + H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT
Sbjct: 149 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 206
Query: 246 EFMAPEL--YEEEYNELVDIYSFGMCILEMVTFEYPYSECKN--PAQIF--KKVTSGIKP 299
+ PE Y + ++S G+ + +MV + P+ + Q+F ++V+S
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSS---- 262
Query: 300 ASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQ 337
+ + I CL + S+R + +++ P++Q
Sbjct: 263 ---------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 84 VLGKGAFKTVY----KAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDN 139
V+G+G++ V K D ++V + DD D+ + +E H+ + +
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDD-----EDIDWVQTEKHVFEQASNHP 70
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
+ S + + + E G+L + ++ + + + + ++ +I L YLH
Sbjct: 71 FLVGLHSCFQTESRLF-FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 129
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--TARSVIGTPEFMAPELYE-EE 256
II+RDLK DN+ ++ + G +K+ D G+ +P T GTP ++APE+ E+
Sbjct: 130 G--IIYRDLKLDNVLLD-SEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED 186
Query: 257 YNELVDIYSFGMCILEMVTFEYPY---SECKNPAQ 288
Y VD ++ G+ + EM+ P+ NP Q
Sbjct: 187 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 221
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 123/279 (44%), Gaps = 29/279 (10%)
Query: 71 EKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRV---KIDDVLQLPGDLQKLYS 127
EK+P + +LG G F +VY + VA V +I D +LP ++
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 76
Query: 128 EVHLLKSLKD--DNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNW 185
EV LLK + V++ W + V ++ +L + + + ++ +++
Sbjct: 77 EVVLLKKVSSGFSGVIRLL-DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP 245
Q+L + H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT
Sbjct: 136 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 193
Query: 246 EFMAPEL--YEEEYNELVDIYSFGMCILEMVTFEYPYSECKN--PAQIF--KKVTSGIKP 299
+ PE Y + ++S G+ + +MV + P+ + Q+F ++V+S
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS---- 249
Query: 300 ASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQ 337
+ + I CL + S+R + +++ P++Q
Sbjct: 250 ---------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 279
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 127/281 (45%), Gaps = 33/281 (11%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDL--QKLYSEVHLLKSLK 136
+R + LG+G F V+ G +RV I + PG + + E ++K L+
Sbjct: 269 LRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLR 320
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLV 194
+ +V+ Y ++ + ++TE + G+L + K K + + + + A QI G+
Sbjct: 321 HEKLVQLYAVVSEEP---IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 377
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE 251
Y+ N +HRDL+ NI V G + K+ D GLA I + TAR P ++ APE
Sbjct: 378 YVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 434
Query: 252 --LYEEEYNELVDIYSFGMCILEMVT-FEYPYSECKNPAQIFKKVTSGIK----PASLAK 304
LY + D++SFG+ + E+ T PY N ++ +V G + P
Sbjct: 435 AALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCPPECPES 492
Query: 305 VNDPQIKGFI-EKCLVPASERLSAKDLLKDPFLQVENQKEP 344
++D + + E P E L A L+D F E Q +P
Sbjct: 493 LHDLMCQCWRKEPEERPTFEYLQA--FLEDYFTSTEPQXQP 531
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 11/217 (5%)
Query: 71 EKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRV---KIDDVLQLPGDLQKLYS 127
EK+P + +LG G F +VY + VA V +I D +LP ++
Sbjct: 45 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 103
Query: 128 EVHLLKSLKD--DNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNW 185
EV LLK + V++ W + V ++ +L + + + ++ +++
Sbjct: 104 EVVLLKKVSSGFSGVIRLL-DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 162
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP 245
Q+L + H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT
Sbjct: 163 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 220
Query: 246 EFMAPEL--YEEEYNELVDIYSFGMCILEMVTFEYPY 280
+ PE Y + ++S G+ + +MV + P+
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 257
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 123/279 (44%), Gaps = 29/279 (10%)
Query: 71 EKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRV---KIDDVLQLPGDLQKLYS 127
EK+P + +LG G F +VY + VA V +I D +LP ++
Sbjct: 17 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 75
Query: 128 EVHLLKSLKD--DNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNW 185
EV LLK + V++ W + V ++ +L + + + ++ +++
Sbjct: 76 EVVLLKKVSSGFSGVIRLL-DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 134
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP 245
Q+L + H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT
Sbjct: 135 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 192
Query: 246 EFMAPEL--YEEEYNELVDIYSFGMCILEMVTFEYPYSECKN--PAQIF--KKVTSGIKP 299
+ PE Y + ++S G+ + +MV + P+ + Q+F ++V+S
Sbjct: 193 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS---- 248
Query: 300 ASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQ 337
+ + I CL + S+R + +++ P++Q
Sbjct: 249 ---------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 278
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 123/279 (44%), Gaps = 29/279 (10%)
Query: 71 EKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRV---KIDDVLQLPGDLQKLYS 127
EK+P + +LG G F +VY + VA V +I D +LP ++
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 61
Query: 128 EVHLLKSLKD--DNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNW 185
EV LLK + V++ W + V ++ +L + + + ++ +++
Sbjct: 62 EVVLLKKVSSGFSGVIRLL-DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 120
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP 245
Q+L + H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT
Sbjct: 121 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 178
Query: 246 EFMAPEL--YEEEYNELVDIYSFGMCILEMVTFEYPYSECKN--PAQIF--KKVTSGIKP 299
+ PE Y + ++S G+ + +MV + P+ + Q+F ++V+S
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS---- 234
Query: 300 ASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQ 337
+ + I CL + S+R + +++ P++Q
Sbjct: 235 ---------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 123/279 (44%), Gaps = 29/279 (10%)
Query: 71 EKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRV---KIDDVLQLPGDLQKLYS 127
EK+P + +LG G F +VY + VA V +I D +LP ++
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 88
Query: 128 EVHLLKSLKD--DNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNW 185
EV LLK + V++ W + V ++ +L + + + ++ +++
Sbjct: 89 EVVLLKKVSSGFSGVIRLL-DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP 245
Q+L + H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT
Sbjct: 148 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 205
Query: 246 EFMAPEL--YEEEYNELVDIYSFGMCILEMVTFEYPYSECKN--PAQIF--KKVTSGIKP 299
+ PE Y + ++S G+ + +MV + P+ + Q+F ++V+S
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSS---- 261
Query: 300 ASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQ 337
+ + I CL + S+R + +++ P++Q
Sbjct: 262 ---------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 11/217 (5%)
Query: 71 EKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRV---KIDDVLQLPGDLQKLYS 127
EK+P + +LG G F +VY + VA V +I D +LP ++
Sbjct: 17 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 75
Query: 128 EVHLLKSLKD--DNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNW 185
EV LLK + V++ W + V ++ +L + + + ++ +++
Sbjct: 76 EVVLLKKVSSGFSGVIRLL-DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 134
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP 245
Q+L + H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT
Sbjct: 135 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 192
Query: 246 EFMAPEL--YEEEYNELVDIYSFGMCILEMVTFEYPY 280
+ PE Y + ++S G+ + +MV + P+
Sbjct: 193 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 229
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 11/217 (5%)
Query: 71 EKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRV---KIDDVLQLPGDLQKLYS 127
EK+P + +LG G F +VY + VA V +I D +LP ++
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 76
Query: 128 EVHLLKSLKD--DNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNW 185
EV LLK + V++ W + V ++ +L + + + ++ +++
Sbjct: 77 EVVLLKKVSSGFSGVIRLL-DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP 245
Q+L + H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT
Sbjct: 136 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 193
Query: 246 EFMAPEL--YEEEYNELVDIYSFGMCILEMVTFEYPY 280
+ PE Y + ++S G+ + +MV + P+
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDL--QKLYSEVHLLKSLK 136
+R + LG+G F V+ G +RV I + PG + + E ++K L+
Sbjct: 10 LRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLR 61
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLV 194
+ +V+ Y ++ + ++TE + G+L + K K + + + + A QI G+
Sbjct: 62 HEKLVQLYAV---VSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 118
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE 251
Y+ N +HRDL+ NI V G + K+ D GLA I + TAR P ++ APE
Sbjct: 119 YVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPE 175
Query: 252 --LYEEEYNELVDIYSFGMCILEMVT 275
LY + D++SFG+ + E+ T
Sbjct: 176 AALY-GRFTIKSDVWSFGILLTELTT 200
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 25/260 (9%)
Query: 52 FLSGMLGTAEPPDADSDFV-EKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAG----IEVA 106
+ G +G+ +P A F E PS V +V+G G F VYK + + + VA
Sbjct: 21 YFQGAMGS-DPNQAVLKFTTEIHPS--CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVA 77
Query: 107 WSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGN 166
+K + D E ++ N+++ V K K + +ITE +G
Sbjct: 78 IKTLKAGYTEKQRVDF---LGEAGIMGQFSHHNIIRL--EGVISKYKPMMIITEYMENGA 132
Query: 167 LRQY-RKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIG 225
L ++ R+K + + R I G+ YL + N +HRDL NI VN N K+
Sbjct: 133 LDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN--YVHRDLAARNILVNSNL-VCKVS 189
Query: 226 DLGLAIAMQ-QPTARSVIGTPE----FMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EY 278
D GL+ ++ P A + + APE + ++ D++SFG+ + E++T+ E
Sbjct: 190 DFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGER 249
Query: 279 PYSECKNPAQIFKKVTSGIK 298
PY E N ++ K + G +
Sbjct: 250 PYWELSN-HEVMKAINDGFR 268
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 39/218 (17%)
Query: 83 EVLGKGAFKTVYKA--FDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNV 140
EV +G F V+KA +E+ +++ +Q Q Y EV+ L +K +N+
Sbjct: 30 EVKARGRFGCVWKAQLLNEYVAVKIF--------PIQDKQSWQNEY-EVYSLPGMKHENI 80
Query: 141 VKFYKSWVDDKKKT-----VNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVY 195
++F + +K+ T + +IT G+L + K + V + + A + GL Y
Sbjct: 81 LQFIGA---EKRGTSVDVDLWLITAFHEKGSLSDFLKANV-VSWNELCHIAETMARGLAY 136
Query: 196 LH--------SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA----RSVIG 243
LH H P I HRD+K N+ + N I D GLA+ + + +G
Sbjct: 137 LHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC-IADFGLALKFEAGKSAGDTHGQVG 195
Query: 244 TPEFMAPELYEEEYN------ELVDIYSFGMCILEMVT 275
T +MAPE+ E N +D+Y+ G+ + E+ +
Sbjct: 196 TRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 125/285 (43%), Gaps = 51/285 (17%)
Query: 85 LGKGAFKTVYKAFDEFAGI------EVAWSRVKI--DDVLQLPGDLQKLYSEVHLLKSL- 135
LG+GAF V A E GI E VK+ DD + DL L SE+ ++K +
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATE--KDLSDLVSEMEMMKMIG 98
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY----------------RKKHKNVDI 179
K N++ + D V I E + GNLR+Y R + +
Sbjct: 99 KHKNIINLLGACTQDGPLYV--IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 180 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-----IAMQ 234
K + + Q+ G+ YL S IHRDL N+ V N+ ++I D GLA I
Sbjct: 157 KDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMRIADFGLARDINNIDYY 213
Query: 235 QPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF---EYPYSECKNPAQIF 290
+ T + ++MAPE L++ Y D++SFG+ + E+ T YP + ++
Sbjct: 214 KKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 272
Query: 291 KKVTSGIKPASLAKVNDPQIKGFIEKCL--VPASERLSAKDLLKD 333
K+ KPA+ ++ + C VP S+R + K L++D
Sbjct: 273 KEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVED 312
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 11/217 (5%)
Query: 71 EKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRV---KIDDVLQLPGDLQKLYS 127
EK+P + +LG G F +VY + VA V +I D +LP ++
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 89
Query: 128 EVHLLKSLKD--DNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNW 185
EV LLK + V++ W + V ++ +L + + + ++ +++
Sbjct: 90 EVVLLKKVSSGFSGVIRLL-DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP 245
Q+L + H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT
Sbjct: 149 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 206
Query: 246 EFMAPEL--YEEEYNELVDIYSFGMCILEMVTFEYPY 280
+ PE Y + ++S G+ + +MV + P+
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 21/234 (8%)
Query: 148 VDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRD 207
V D K V ++TEL G L + K + I + YLHS ++HRD
Sbjct: 89 VYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG--VVHRD 146
Query: 208 LKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTARSVIGTP----EFMAPELYEEE-YNE 259
LK NI +GN ++I D G A ++ ++ TP F+APE+ + + Y+E
Sbjct: 147 LKPSNILYVDESGNPECLRICDFGFAKQLR--AENGLLMTPCYTANFVAPEVLKRQGYDE 204
Query: 260 LVDIYSFGMCILEMVTFEYPYSE--CKNPAQIFKKVTSGIKPASLAKVN--DPQIKGFIE 315
DI+S G+ + M+ P++ P +I ++ SG S N K +
Sbjct: 205 GCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVS 264
Query: 316 KCL-VPASERLSAKDLLKDPFLQVENQKEPICDPLKLPIQSLKMLRLPMSGPSS 368
K L V +RL+AK +L+ P++ QK+ + +L Q L++++ M+ S
Sbjct: 265 KMLHVDPHQRLTAKQVLQHPWV---TQKDKLPQS-QLSHQDLQLVKGAMAATYS 314
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 81 YDEVLGKGAFKTVY----KAFDEFAGIEVAWSRVKI--DDVLQLPGDLQKLYSEVH-LLK 133
Y ++LGKG F V KA + +++ V I D+V + + L + H L
Sbjct: 9 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT 68
Query: 134 SLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGL 193
+LK Y D+ + + E G L + + + + + + +I+ L
Sbjct: 69 ALK-------YAFQTHDR---LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL 118
Query: 194 VYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA--MQQPTARSVIGTPEFMAPE 251
YLHS + +++RD+K +N+ ++ + G +KI D GL T + GTPE++APE
Sbjct: 119 EYLHSRD--VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 252 LYEE-EYNELVDIYSFGMCILEMVTFEYPY 280
+ E+ +Y VD + G+ + EM+ P+
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 11/217 (5%)
Query: 71 EKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRV---KIDDVLQLPGDLQKLYS 127
EK+P + +LG G F +VY + VA V +I D +LP ++
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 76
Query: 128 EVHLLKSLKD--DNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNW 185
EV LLK + V++ W + V ++ +L + + + ++ +++
Sbjct: 77 EVVLLKKVSSGFSGVIRLL-DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP 245
Q+L + H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT
Sbjct: 136 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 193
Query: 246 EFMAPEL--YEEEYNELVDIYSFGMCILEMVTFEYPY 280
+ PE Y + ++S G+ + +MV + P+
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 81 YDEVLGKGAFKTVY----KAFDEFAGIEVAWSRVKI--DDVLQLPGDLQKLYSEVH-LLK 133
Y ++LGKG F V KA + +++ V I D+V + + L + H L
Sbjct: 9 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT 68
Query: 134 SLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGL 193
+LK Y D+ + + E G L + + + + + + +I+ L
Sbjct: 69 ALK-------YAFQTHDR---LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL 118
Query: 194 VYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA--MQQPTARSVIGTPEFMAPE 251
YLHS + +++RD+K +N+ ++ + G +KI D GL T + GTPE++APE
Sbjct: 119 EYLHSRD--VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 252 LYEE-EYNELVDIYSFGMCILEMVTFEYPY 280
+ E+ +Y VD + G+ + EM+ P+
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 123/279 (44%), Gaps = 29/279 (10%)
Query: 71 EKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRV---KIDDVLQLPGDLQKLYS 127
EK+P + +LG G F +VY + VA V +I D +LP ++
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 88
Query: 128 EVHLLKSLKD--DNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNW 185
EV LLK + V++ W + V ++ +L + + + ++ +++
Sbjct: 89 EVVLLKKVSSGFSGVIRLL-DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP 245
Q+L + H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT
Sbjct: 148 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 205
Query: 246 EFMAPEL--YEEEYNELVDIYSFGMCILEMVTFEYPYSECKN--PAQIF--KKVTSGIKP 299
+ PE Y + ++S G+ + +MV + P+ + Q+F ++V+S
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS---- 261
Query: 300 ASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQ 337
+ + I CL + S+R + +++ P++Q
Sbjct: 262 ---------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 106/230 (46%), Gaps = 29/230 (12%)
Query: 82 DEVLGKGAF----KTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKD 137
D+ LG+G+F K V+K ++ +++ R++ + QK + + L +
Sbjct: 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRME--------ANTQKEITALKLCEG--H 65
Query: 138 DNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLH 197
N+VK ++ + D + ++ EL G L + KK K+ R+++ + H
Sbjct: 66 PNIVKLHEVFHD--QLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVS--H 121
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFM----APELY 253
H+ ++HRDLK +N+ + ++I + A +P + TP F APEL
Sbjct: 122 MHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELL 181
Query: 254 EEE-YNELVDIYSFGMCILEMVTFEYPYSE------CKNPAQIFKKVTSG 296
+ Y+E D++S G+ + M++ + P+ C + +I KK+ G
Sbjct: 182 NQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG 231
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 11/217 (5%)
Query: 71 EKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRV---KIDDVLQLPGDLQKLYS 127
EK+P + +LG G F +VY + VA V +I D +LP ++
Sbjct: 50 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 108
Query: 128 EVHLLKSLKD--DNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNW 185
EV LLK + V++ W + V ++ +L + + + ++ +++
Sbjct: 109 EVVLLKKVSSGFSGVIRLL-DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 167
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP 245
Q+L + H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT
Sbjct: 168 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 225
Query: 246 EFMAPEL--YEEEYNELVDIYSFGMCILEMVTFEYPY 280
+ PE Y + ++S G+ + +MV + P+
Sbjct: 226 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 262
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 11/217 (5%)
Query: 71 EKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRV---KIDDVLQLPGDLQKLYS 127
EK+P + +LG G F +VY + VA V +I D +LP ++
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 89
Query: 128 EVHLLKSLKD--DNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNW 185
EV LLK + V++ W + V ++ +L + + + ++ +++
Sbjct: 90 EVVLLKKVSSGFSGVIRLL-DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP 245
Q+L + H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT
Sbjct: 149 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 206
Query: 246 EFMAPEL--YEEEYNELVDIYSFGMCILEMVTFEYPY 280
+ PE Y + ++S G+ + +MV + P+
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 130/298 (43%), Gaps = 49/298 (16%)
Query: 78 YVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLK- 136
Y E+LG+GA+ V A G E A VKI + Q +++ EV L +
Sbjct: 14 YKLTSELLGEGAYAKVQGAVSLQNGKEYA---VKIIEK-QAGHSRSRVFREVETLYQCQG 69
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYL 196
+ N+++ + + DD + ++ E G++ + +K K+ + + R + L +L
Sbjct: 70 NKNILELIEFFEDDTR--FYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFL 127
Query: 197 HSHNPPIIHRDLKCDNIFVNGNH--GEVKIGDLGLAIAMQ---------QPTARSVIGTP 245
H+ I HRDLK +NI VKI D L M+ P + G+
Sbjct: 128 HTKG--IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSA 185
Query: 246 EFMAPELYE------EEYNELVDIYSFGMCILEMVTFEYPY----------------SEC 283
E+MAPE+ E Y++ D++S G+ + M++ P+ C
Sbjct: 186 EYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVC 245
Query: 284 KNPAQIFKKVTSG---IKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQ 337
+N ++F+ + G A ++ + K I K LV A +RLSA +L+ P++Q
Sbjct: 246 QN--KLFESIQEGKYEFPDKDWAHISS-EAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%), Gaps = 31/219 (14%)
Query: 79 VRYDEVLGKGAFKTVYKA-FDEFAGIEVAWSRVKIDDVLQLPGDL--QKLYSEVHLLKSL 135
++ ++ LG G F V+ A +++ + V + PG + + +E +++K+L
Sbjct: 184 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMK---------PGSMSVEAFLAEANVMKTL 234
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NWARQILHGL 193
+ D +VK + K+ + +ITE G+L + K + + K +++ QI G+
Sbjct: 235 QHDKLVKLHAVVT---KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGM 291
Query: 194 VYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-IAMQQPTARSVIGTPEFMAPEL 252
++ N IHRDL+ NI V+ + KI D GLA + + P ++ APE
Sbjct: 292 AFIEQRN--YIHRDLRAANILVSASL-VCKIADFGLARVGAKFPI--------KWTAPEA 340
Query: 253 YE-EEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 289
+ D++SFG+ ++E+VT+ PY NP I
Sbjct: 341 INFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 379
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 123/279 (44%), Gaps = 29/279 (10%)
Query: 71 EKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRV---KIDDVLQLPGDLQKLYS 127
EK+P + +LG G F +VY + VA V +I D +LP ++
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 61
Query: 128 EVHLLKSLKD--DNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNW 185
EV LLK + V++ W + V ++ +L + + + ++ +++
Sbjct: 62 EVVLLKKVSSGFSGVIRLL-DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 120
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP 245
Q+L + H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT
Sbjct: 121 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 178
Query: 246 EFMAPEL--YEEEYNELVDIYSFGMCILEMVTFEYPYSECKN--PAQIF--KKVTSGIKP 299
+ PE Y + ++S G+ + +MV + P+ + Q+F ++V+S
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS---- 234
Query: 300 ASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQ 337
+ + I CL + S+R + +++ P++Q
Sbjct: 235 ---------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 123/279 (44%), Gaps = 29/279 (10%)
Query: 71 EKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRV---KIDDVLQLPGDLQKLYS 127
EK+P + +LG G F +VY + VA V +I D +LP ++
Sbjct: 2 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 60
Query: 128 EVHLLKSLKD--DNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNW 185
EV LLK + V++ W + V ++ +L + + + ++ +++
Sbjct: 61 EVVLLKKVSSGFSGVIRLL-DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 119
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP 245
Q+L + H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT
Sbjct: 120 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 177
Query: 246 EFMAPEL--YEEEYNELVDIYSFGMCILEMVTFEYPYSECKN--PAQIF--KKVTSGIKP 299
+ PE Y + ++S G+ + +MV + P+ + Q+F ++V+S
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS---- 233
Query: 300 ASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQ 337
+ + I CL + S+R + +++ P++Q
Sbjct: 234 ---------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 263
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 11/217 (5%)
Query: 71 EKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRV---KIDDVLQLPGDLQKLYS 127
EK+P + +LG G F +VY + VA V +I D +LP ++
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 88
Query: 128 EVHLLKSLKD--DNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNW 185
EV LLK + V++ W + V ++ +L + + + ++ +++
Sbjct: 89 EVVLLKKVSSGFSGVIRLL-DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP 245
Q+L + H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT
Sbjct: 148 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 205
Query: 246 EFMAPEL--YEEEYNELVDIYSFGMCILEMVTFEYPY 280
+ PE Y + ++S G+ + +MV + P+
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 76 GRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL 135
R + E +GKG F V++ ++ G EVA VKI + ++ +E++ L
Sbjct: 41 ARTIVLQESIGKGRFGEVWRG--KWRGEEVA---VKIFSSREERSWFRE--AEIYQTVML 93
Query: 136 KDDNVVKFYKSWVDDKKK----TVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILH 191
+ +N++ F + D+K + ++++ G+L Y ++ V ++ + A
Sbjct: 94 RHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTAS 150
Query: 192 GLVYLHSH------NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT------AR 239
GL +LH P I HRDLK NI V N G I DLGLA+ T
Sbjct: 151 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHDSATDTIDIAPN 209
Query: 240 SVIGTPEFMAPELYEEEYN-------ELVDIYSFGMCILEM 273
+GT +MAPE+ ++ N + DIY+ G+ E+
Sbjct: 210 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 123/279 (44%), Gaps = 29/279 (10%)
Query: 71 EKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRV---KIDDVLQLPGDLQKLYS 127
EK+P + +LG G F +VY + VA V +I D +LP ++
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 61
Query: 128 EVHLLKSLKD--DNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNW 185
EV LLK + V++ W + V ++ +L + + + ++ +++
Sbjct: 62 EVVLLKKVSSGFSGVIRLL-DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 120
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP 245
Q+L + H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT
Sbjct: 121 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 178
Query: 246 EFMAPEL--YEEEYNELVDIYSFGMCILEMVTFEYPYSECKN--PAQIF--KKVTSGIKP 299
+ PE Y + ++S G+ + +MV + P+ + Q+F ++V+S
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS---- 234
Query: 300 ASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQ 337
+ + I CL + S+R + +++ P++Q
Sbjct: 235 ---------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+V+G G+F VY+A +G VA I VLQ D + E+ +++ L N+V+
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQ---DKRFKNRELQIMRKLDHCNIVR 111
Query: 143 ----FYKSWVDDKKKTVNMITELFTSGNLR---QYRKKHKNVDIKVIKNWARQILHGLVY 195
FY S + +N++ + R Y + + + + +K + Q+ L Y
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPELY 253
+HS I HRD+K N+ ++ + +K+ D G A + +P S I + + APEL
Sbjct: 172 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICSRYYRAPELI 228
Query: 254 --EEEYNELVDIYSFGMCILEMV 274
+Y +D++S G + E++
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELL 251
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+V+G G+F VY+A +G VA I VLQ D + E+ +++ L N+V+
Sbjct: 62 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQ---DKRFKNRELQIMRKLDHCNIVR 113
Query: 143 ----FYKSWVDDKKKTVNMITELFTSGNLR---QYRKKHKNVDIKVIKNWARQILHGLVY 195
FY S + +N++ + R Y + + + + +K + Q+ L Y
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 173
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPELY 253
+HS I HRD+K N+ ++ + +K+ D G A + +P S I + + APEL
Sbjct: 174 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICSRYYRAPELI 230
Query: 254 --EEEYNELVDIYSFGMCILEMV 274
+Y +D++S G + E++
Sbjct: 231 FGATDYTSSIDVWSAGCVLAELL 253
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+V+G G+F VY+A +G VA I VLQ D + E+ +++ L N+V+
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQ---DKRFKNRELQIMRKLDHCNIVR 111
Query: 143 ----FYKSWVDDKKKTVNMITELFTSGNLR---QYRKKHKNVDIKVIKNWARQILHGLVY 195
FY S + +N++ + R Y + + + + +K + Q+ L Y
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPELY 253
+HS I HRD+K N+ ++ + +K+ D G A + +P S I + + APEL
Sbjct: 172 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICSRYYRAPELI 228
Query: 254 --EEEYNELVDIYSFGMCILEMV 274
+Y +D++S G + E++
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELL 251
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+V+G G+F VY+A +G VA I VLQ D + E+ +++ L N+V+
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQ---DKRFKNRELQIMRKLDHCNIVR 115
Query: 143 ----FYKSWVDDKKKTVNMITELFTSGNLR---QYRKKHKNVDIKVIKNWARQILHGLVY 195
FY S + +N++ + R Y + + + + +K + Q+ L Y
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 175
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPELY 253
+HS I HRD+K N+ ++ + +K+ D G A + +P S I + + APEL
Sbjct: 176 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICSRYYRAPELI 232
Query: 254 --EEEYNELVDIYSFGMCILEMV 274
+Y +D++S G + E++
Sbjct: 233 FGATDYTSSIDVWSAGCVLAELL 255
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 11/217 (5%)
Query: 71 EKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRV---KIDDVLQLPGDLQKLYS 127
EK+P + +LG G F +VY + VA V +I D +LP ++
Sbjct: 25 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 83
Query: 128 EVHLLKSLKD--DNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNW 185
EV LLK + V++ W + V ++ +L + + + ++ +++
Sbjct: 84 EVVLLKKVSSGFSGVIRLL-DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 142
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP 245
Q+L + H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT
Sbjct: 143 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 200
Query: 246 EFMAPEL--YEEEYNELVDIYSFGMCILEMVTFEYPY 280
+ PE Y + ++S G+ + +MV + P+
Sbjct: 201 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 237
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 76 GRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL 135
R + E +GKG F V++ ++ G EVA VKI + ++ +E++ L
Sbjct: 28 ARTIVLQESIGKGRFGEVWRG--KWRGEEVA---VKIFSSREERSWFRE--AEIYQTVML 80
Query: 136 KDDNVVKFYKSWVDDKKK----TVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILH 191
+ +N++ F + D+K + ++++ G+L Y ++ V ++ + A
Sbjct: 81 RHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTAS 137
Query: 192 GLVYLHSH------NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT------AR 239
GL +LH P I HRDLK NI V N G I DLGLA+ T
Sbjct: 138 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHDSATDTIDIAPN 196
Query: 240 SVIGTPEFMAPELYEEEYN-------ELVDIYSFGMCILEM 273
+GT +MAPE+ ++ N + DIY+ G+ E+
Sbjct: 197 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 81 YDEVLGKGAFKTVY----KAFDEFAGIEVAWSRVKI--DDVLQLPGDLQKLYSEVH-LLK 133
Y ++LGKG F V KA + +++ V I D+V + + L + H L
Sbjct: 14 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT 73
Query: 134 SLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGL 193
+LK Y D+ + + E G L + + + + + + +I+ L
Sbjct: 74 ALK-------YAFQTHDR---LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL 123
Query: 194 VYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA--MQQPTARSVIGTPEFMAPE 251
YLHS + +++RD+K +N+ ++ + G +KI D GL T + GTPE++APE
Sbjct: 124 EYLHSRD--VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 180
Query: 252 LYEE-EYNELVDIYSFGMCILEMVTFEYPY 280
+ E+ +Y VD + G+ + EM+ P+
Sbjct: 181 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHG 192
+SL+ N+V+F + + + M E + G L + + + +Q++ G
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVM--EYASGGELFERICNAGRFSEDEARFFFQQLISG 127
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVNGNHG-EVKIGDLGLAIA-MQQPTARSVIGTPEFMAP 250
+ Y H+ + HRDLK +N ++G+ +KI D G + A + +S +GTP ++AP
Sbjct: 128 VSYAHAMQ--VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAP 185
Query: 251 E-LYEEEYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 293
E L ++EY+ ++ D++S G+ + M+ YP+ + + P K +
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 81 YDEVLGKGAFKTVY----KAFDEFAGIEVAWSRVKI--DDVLQLPGDLQKLYSEVH-LLK 133
Y ++LGKG F V KA + +++ V I D+V + + L + H L
Sbjct: 9 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT 68
Query: 134 SLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGL 193
+LK Y D+ + + E G L + + + + + + +I+ L
Sbjct: 69 ALK-------YAFQTHDR---LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL 118
Query: 194 VYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA--MQQPTARSVIGTPEFMAPE 251
YLHS + +++RD+K +N+ ++ + G +KI D GL T + GTPE++APE
Sbjct: 119 EYLHSRD--VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 252 LYEE-EYNELVDIYSFGMCILEMVTFEYPY 280
+ E+ +Y VD + G+ + EM+ P+
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 84 VLGKGAFKTVYKAFDEFA-GIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+LG+G F VYK A G VA R+K + G+LQ +EV ++ N+++
Sbjct: 45 ILGRGGFGKVYKG--RLADGTLVAVKRLK--EERXQGGELQ-FQTEVEMISMAVHRNLLR 99
Query: 143 FYKSWVDDKKKTVNMITELFTSGN----LRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 198
+ ++ ++ +G+ LR+ + +D + A GL YLH
Sbjct: 100 LRGFCMTPTERL--LVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHD 157
Query: 199 H-NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM---QQPTARSVIGTPEFMAPE-LY 253
H +P IIHRD+K NI ++ E +GD GLA M +V GT +APE L
Sbjct: 158 HCDPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLS 216
Query: 254 EEEYNELVDIYSFGMCILEMVTFEYPY 280
+ +E D++ +G+ +LE++T + +
Sbjct: 217 TGKSSEKTDVFGYGVMLLELITGQRAF 243
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 76 GRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL 135
R + E +GKG F V++ ++ G EVA VKI + ++ +E++ L
Sbjct: 3 ARTIVLQESIGKGRFGEVWRG--KWRGEEVA---VKIFSSREERSWFRE--AEIYQTVML 55
Query: 136 KDDNVVKFYKSWVDDKKK----TVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILH 191
+ +N++ F + D+K + ++++ G+L Y ++ V ++ + A
Sbjct: 56 RHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTAS 112
Query: 192 GLVYLHSH------NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT------AR 239
GL +LH P I HRDLK NI V N G I DLGLA+ T
Sbjct: 113 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHDSATDTIDIAPN 171
Query: 240 SVIGTPEFMAPELYEEEYN-------ELVDIYSFGMCILEM 273
+GT +MAPE+ ++ N + DIY+ G+ E+
Sbjct: 172 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+V+G G+F VY+A +G VA I VLQ D + E+ +++ L N+V+
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQ---DKRFKNRELQIMRKLDHCNIVR 105
Query: 143 ----FYKSWVDDKKKTVNMITELFTSGNLR---QYRKKHKNVDIKVIKNWARQILHGLVY 195
FY S + +N++ + R Y + + + + +K + Q+ L Y
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 165
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPELY 253
+HS I HRD+K N+ ++ + +K+ D G A + +P S I + + APEL
Sbjct: 166 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICSRYYRAPELI 222
Query: 254 --EEEYNELVDIYSFGMCILEMV 274
+Y +D++S G + E++
Sbjct: 223 FGATDYTSSIDVWSAGCVLAELL 245
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 97/203 (47%), Gaps = 8/203 (3%)
Query: 81 YDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNV 140
Y ++LGKG F V ++ G A +K +V+ ++ +E +L++ + +
Sbjct: 152 YLKLLGKGTFGKVILVKEKATGRYYAMKILK-KEVIVAKDEVAHTLTENRVLQNSRHPFL 210
Query: 141 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
S+ + + + E G L + + + + + +I+ L YLHS
Sbjct: 211 TALKYSFQTHDR--LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 268
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA--MQQPTARSVIGTPEFMAPELYEE-EY 257
+++RDLK +N+ ++ + G +KI D GL T ++ GTPE++APE+ E+ +Y
Sbjct: 269 N-VVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDY 326
Query: 258 NELVDIYSFGMCILEMVTFEYPY 280
VD + G+ + EM+ P+
Sbjct: 327 GRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+V+G G+F VY+A +G VA I VLQ D + E+ +++ L N+V+
Sbjct: 105 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQ---DKRFKNRELQIMRKLDHCNIVR 156
Query: 143 ----FYKSWVDDKKKTVNMITELFTSGNLR---QYRKKHKNVDIKVIKNWARQILHGLVY 195
FY S + +N++ + R Y + + + + +K + Q+ L Y
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPELY 253
+HS I HRD+K N+ ++ + +K+ D G A + +P S I + + APEL
Sbjct: 217 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICSRYYRAPELI 273
Query: 254 --EEEYNELVDIYSFGMCILEMV 274
+Y +D++S G + E++
Sbjct: 274 FGATDYTSSIDVWSAGCVLAELL 296
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 128/289 (44%), Gaps = 49/289 (16%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDL--QKLYSEVHLLKSLK 136
+R + LG+G F V+ G +RV I + PG++ + E ++K L+
Sbjct: 187 LRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLK--PGNMSPEAFLQEAQVMKKLR 238
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLV 194
+ +V+ Y ++ + ++TE + G+L + K K + + + + A QI G+
Sbjct: 239 HEKLVQLYAVVSEEP---IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 295
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE 251
Y+ N +HRDL+ NI V G + K+ D GL I + TAR P ++ APE
Sbjct: 296 YVERMN--YVHRDLRAANILV-GENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPE 352
Query: 252 --LYEEEYNELVDIYSFGMCILEMVT-FEYPYSECKNPAQIFKKVTSGIK-------PAS 301
LY + D++SFG+ + E+ T PY N ++ +V G + P S
Sbjct: 353 AALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCPPECPES 410
Query: 302 LAKV------NDPQIKGFIEKCLVPASERLSAKDLLKDPFLQVENQKEP 344
L + DP+ + P E L A L+D F E Q +P
Sbjct: 411 LHDLMCQCWRKDPEER--------PTFEYLQA--FLEDYFTSTEPQXQP 449
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 128/284 (45%), Gaps = 31/284 (10%)
Query: 76 GRYVRYD--EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ----LPGDLQKL---- 125
G Y Y+ E+LG+G V + + E A VKI DV ++Q+L
Sbjct: 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYA---VKIIDVTGGGSFSAEEVQELREAT 70
Query: 126 YSEVHLLKSLKDD-NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKN 184
EV +L+ + N+++ ++ + ++ +L G L Y + + K +
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTY--ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK 128
Query: 185 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ-QPTARSVIG 243
R +L + LH N I+HRDLK +NI ++ + +K+ D G + + RSV G
Sbjct: 129 IMRALLEVICALHKLN--IVHRDLKPENILLDDDMN-IKLTDFGFSCQLDPGEKLRSVCG 185
Query: 244 TPEFMAPELYEEE-------YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
TP ++APE+ E Y + VD++S G+ + ++ P+ K + + + SG
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ-MLMLRMIMSG 244
Query: 297 IKPASLAKVND--PQIKGFIEKCL-VPASERLSAKDLLKDPFLQ 337
+ +D +K + + L V +R +A++ L PF Q
Sbjct: 245 NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 123/279 (44%), Gaps = 29/279 (10%)
Query: 71 EKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRV---KIDDVLQLPGDLQKLYS 127
EK+P + +LG G F +VY + VA V +I D +LP ++
Sbjct: 1 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPM 59
Query: 128 EVHLLKSLKD--DNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNW 185
EV LLK + V++ W + V ++ +L + + + ++ +++
Sbjct: 60 EVVLLKKVSSGFSGVIRLL-DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 118
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP 245
Q+L + H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT
Sbjct: 119 FWQVLEAV--RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR 176
Query: 246 EFMAPEL--YEEEYNELVDIYSFGMCILEMVTFEYPYSECKN--PAQIF--KKVTSGIKP 299
+ PE Y + ++S G+ + +MV + P+ + Q+F ++V+S
Sbjct: 177 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS---- 232
Query: 300 ASLAKVNDPQIKGFIEKCL-VPASERLSAKDLLKDPFLQ 337
+ + I CL + S+R + +++ P++Q
Sbjct: 233 ---------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 262
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 76 GRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL 135
R + E +GKG F V++ ++ G EVA VKI + ++ +E++ L
Sbjct: 2 ARTIVLQESIGKGRFGEVWRG--KWRGEEVA---VKIFSSREERSWFRE--AEIYQTVML 54
Query: 136 KDDNVVKFYKSWVDDKKK----TVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILH 191
+ +N++ F + D+K + ++++ G+L Y ++ V ++ + A
Sbjct: 55 RHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTAS 111
Query: 192 GLVYLHSH------NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT------AR 239
GL +LH P I HRDLK NI V N G I DLGLA+ T
Sbjct: 112 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHDSATDTIDIAPN 170
Query: 240 SVIGTPEFMAPELYEEEYN-------ELVDIYSFGMCILEM 273
+GT +MAPE+ ++ N + DIY+ G+ E+
Sbjct: 171 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 76 GRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL 135
R + E +GKG F V++ ++ G EVA VKI + ++ +E++ L
Sbjct: 8 ARTIVLQESIGKGRFGEVWRG--KWRGEEVA---VKIFSSREERSWFRE--AEIYQTVML 60
Query: 136 KDDNVVKFYKSWVDDKKK----TVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILH 191
+ +N++ F + D+K + ++++ G+L Y ++ V ++ + A
Sbjct: 61 RHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTAS 117
Query: 192 GLVYLHSH------NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT------AR 239
GL +LH P I HRDLK NI V N G I DLGLA+ T
Sbjct: 118 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHDSATDTIDIAPN 176
Query: 240 SVIGTPEFMAPELYEEEYN-------ELVDIYSFGMCILEM 273
+GT +MAPE+ ++ N + DIY+ G+ E+
Sbjct: 177 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 96/203 (47%), Gaps = 8/203 (3%)
Query: 81 YDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNV 140
Y ++LGKG F V ++ G A +K +V+ ++ +E +L++ + +
Sbjct: 14 YLKLLGKGTFGKVILVKEKATGRYYAMKILK-KEVIVAKDEVAHTLTENRVLQNSRHPFL 72
Query: 141 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
S+ + + + E G L + + + + + +I+ L YLHS
Sbjct: 73 TALKYSFQTHDR--LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 130
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA--MQQPTARSVIGTPEFMAPELYEE-EY 257
+++RDLK +N+ ++ + G +KI D GL T + GTPE++APE+ E+ +Y
Sbjct: 131 N-VVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDY 188
Query: 258 NELVDIYSFGMCILEMVTFEYPY 280
VD + G+ + EM+ P+
Sbjct: 189 GRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 15/201 (7%)
Query: 148 VDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRD 207
V D K V ++TEL G L + K + I + YLH+ ++HRD
Sbjct: 84 VYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG--VVHRD 141
Query: 208 LKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTA--RSVIGTPEFMAPELYEEE-YNELV 261
LK NI +GN ++I D G A ++ + T F+APE+ E + Y+
Sbjct: 142 LKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAAC 201
Query: 262 DIYSFGMCILEMVTFEYPYSECKN--PAQIFKKVTSG---IKPASLAKVNDPQIKGFIEK 316
DI+S G+ + M+T P++ + P +I ++ SG + V+D K + K
Sbjct: 202 DIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTA-KDLVSK 260
Query: 317 CL-VPASERLSAKDLLKDPFL 336
L V +RL+A +L+ P++
Sbjct: 261 MLHVDPHQRLTAALVLRHPWI 281
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 124/285 (43%), Gaps = 51/285 (17%)
Query: 85 LGKGAFKTVYKAFDEFAGI------EVAWSRVKI--DDVLQLPGDLQKLYSEVHLLKSL- 135
LG+G F V A E GI E VK+ DD + DL L SE+ ++K +
Sbjct: 89 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATE--KDLSDLVSEMEMMKMIG 144
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY----------------RKKHKNVDI 179
K N++ + D V I E + GNLR+Y R + +
Sbjct: 145 KHKNIINLLGACTQDGPLYV--IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 202
Query: 180 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-----IAMQ 234
K + + Q+ G+ YL S IHRDL N+ V N+ +KI D GLA I
Sbjct: 203 KDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMKIADFGLARDINNIDYY 259
Query: 235 QPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF---EYPYSECKNPAQIF 290
+ T + ++MAPE L++ Y D++SFG+ + E+ T YP + ++
Sbjct: 260 KKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 318
Query: 291 KKVTSGIKPASLAKVNDPQIKGFIEKCL--VPASERLSAKDLLKD 333
K+ KPA+ ++ + C VP S+R + K L++D
Sbjct: 319 KEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVED 358
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 49/225 (21%)
Query: 83 EVLGKGAFKTVYK-AFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKS--LKDDN 139
E++G+G + VYK + DE VA VK+ + Q +E ++ + ++ DN
Sbjct: 19 ELIGRGRYGAVYKGSLDERP---VA---VKVFSF----ANRQNFINEKNIYRVPLMEHDN 68
Query: 140 VVKFYKSWVDDKKKTVN------MITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGL 193
+ +F V D++ T + ++ E + +G+L +Y H + + + A + GL
Sbjct: 69 IARFI---VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCR-LAHSVTRGL 124
Query: 194 VYLHS-------HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM----------QQP 236
YLH+ + P I HRDL N+ V N G I D GL++ + +
Sbjct: 125 AYLHTELPRGDHYKPAISHRDLNSRNVLVK-NDGTCVISDFGLSMRLTGNRLVRPGEEDN 183
Query: 237 TARSVIGTPEFMAPELYEEEYN--------ELVDIYSFGMCILEM 273
A S +GT +MAPE+ E N + VD+Y+ G+ E+
Sbjct: 184 AAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 97/203 (47%), Gaps = 8/203 (3%)
Query: 81 YDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNV 140
Y ++LGKG F V ++ G A +K +V+ ++ +E +L++ + +
Sbjct: 155 YLKLLGKGTFGKVILVKEKATGRYYAMKILK-KEVIVAKDEVAHTLTENRVLQNSRHPFL 213
Query: 141 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
S+ + + + E G L + + + + + +I+ L YLHS
Sbjct: 214 TALKYSFQTHDR--LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 271
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA--MQQPTARSVIGTPEFMAPELYEE-EY 257
+++RDLK +N+ ++ + G +KI D GL T ++ GTPE++APE+ E+ +Y
Sbjct: 272 N-VVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDY 329
Query: 258 NELVDIYSFGMCILEMVTFEYPY 280
VD + G+ + EM+ P+
Sbjct: 330 GRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 76 GRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL 135
R + E +GKG F V++ ++ G EVA VKI + ++ +E++ L
Sbjct: 5 ARTIVLQESIGKGRFGEVWRG--KWRGEEVA---VKIFSSREERSWFRE--AEIYQTVML 57
Query: 136 KDDNVVKFYKSWVDDKKK----TVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILH 191
+ +N++ F + D+K + ++++ G+L Y ++ V ++ + A
Sbjct: 58 RHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTAS 114
Query: 192 GLVYLHSH------NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT------AR 239
GL +LH P I HRDLK NI V N G I DLGLA+ T
Sbjct: 115 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN-GTCCIADLGLAVRHDSATDTIDIAPN 173
Query: 240 SVIGTPEFMAPELYEEEYN-------ELVDIYSFGMCILEM 273
+GT +MAPE+ ++ N + DIY+ G+ E+
Sbjct: 174 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 128/289 (44%), Gaps = 49/289 (16%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDL--QKLYSEVHLLKSLK 136
+R + LG+G F V+ G +RV I + PG + + E ++K L+
Sbjct: 20 LRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLR 71
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLV 194
+ +V+ Y ++ + ++TE + G+L + K K + + + + A QI G+
Sbjct: 72 HEKLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE 251
Y+ N +HRDL+ NI V G + K+ D GLA I + TAR P ++ APE
Sbjct: 129 YVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 252 --LYEEEYNELVDIYSFGMCILEMVT-FEYPYSECKNPAQIFKKVTSGIK-------PAS 301
LY + D++SFG+ + E+ T PY N ++ +V G + P S
Sbjct: 186 AALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCPPECPES 243
Query: 302 LAKV------NDPQIKGFIEKCLVPASERLSAKDLLKDPFLQVENQKEP 344
L + DP+ + P E L A L+D F E Q +P
Sbjct: 244 LHDLMCQCWRKDPEER--------PTFEYLQA--FLEDYFTSTEPQYQP 282
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 127/281 (45%), Gaps = 33/281 (11%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDL--QKLYSEVHLLKSLK 136
+R + LG+G F V+ G +RV I + PG + + E ++K L+
Sbjct: 186 LRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLR 237
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLV 194
+ +V+ Y ++ + ++TE + G+L + K K + + + + A QI G+
Sbjct: 238 HEKLVQLYAVVSEEP---IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 294
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE 251
Y+ N +HRDL+ NI V G + K+ D GLA I + TAR P ++ APE
Sbjct: 295 YVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 351
Query: 252 --LYEEEYNELVDIYSFGMCILEMVT-FEYPYSECKNPAQIFKKVTSGIK----PASLAK 304
LY + D++SFG+ + E+ T PY N ++ +V G + P
Sbjct: 352 AALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCPPECPES 409
Query: 305 VNDPQIKGFI-EKCLVPASERLSAKDLLKDPFLQVENQKEP 344
++D + + E P E L A L+D F E Q +P
Sbjct: 410 LHDLMCQCWRKEPEERPTFEYLQA--FLEDYFTSTEPQXQP 448
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 128/289 (44%), Gaps = 49/289 (16%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDL--QKLYSEVHLLKSLK 136
+R + LG+G F V+ G +RV I + PG + + E ++K L+
Sbjct: 9 LRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLR 60
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLV 194
+ +V+ Y ++ + ++TE + G+L + K K + + + + A QI G+
Sbjct: 61 HEKLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 117
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE 251
Y+ N +HRDL+ NI V G + K+ D GLA I + TAR P ++ APE
Sbjct: 118 YVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 174
Query: 252 --LYEEEYNELVDIYSFGMCILEMVT-FEYPYSECKNPAQIFKKVTSGIK-------PAS 301
LY + D++SFG+ + E+ T PY N ++ +V G + P S
Sbjct: 175 AALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCPPECPES 232
Query: 302 LAKV------NDPQIKGFIEKCLVPASERLSAKDLLKDPFLQVENQKEP 344
L + DP+ + P E L A L+D F E Q +P
Sbjct: 233 LHDLMCQCWRKDPEER--------PTFEYLQA--FLEDYFTSTEPQYQP 271
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 96/203 (47%), Gaps = 8/203 (3%)
Query: 81 YDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNV 140
Y ++LGKG F V ++ G A +K +V+ ++ +E +L++ + +
Sbjct: 12 YLKLLGKGTFGKVILVKEKATGRYYAMKILK-KEVIVAKDEVAHTLTENRVLQNSRHPFL 70
Query: 141 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
S+ + + + E G L + + + + + +I+ L YLHS
Sbjct: 71 TALKYSFQTHDR--LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 128
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA--MQQPTARSVIGTPEFMAPELYEE-EY 257
+++RDLK +N+ ++ + G +KI D GL T + GTPE++APE+ E+ +Y
Sbjct: 129 N-VVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDY 186
Query: 258 NELVDIYSFGMCILEMVTFEYPY 280
VD + G+ + EM+ P+
Sbjct: 187 GRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 124/285 (43%), Gaps = 51/285 (17%)
Query: 85 LGKGAFKTVYKAFDEFAGI------EVAWSRVKI--DDVLQLPGDLQKLYSEVHLLKSL- 135
LG+G F V A E GI E VK+ DD + DL L SE+ ++K +
Sbjct: 35 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATE--KDLSDLVSEMEMMKMIG 90
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY----------------RKKHKNVDI 179
K N++ + D V I E + GNLR+Y R + +
Sbjct: 91 KHKNIINLLGACTQDGPLYV--IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 148
Query: 180 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-----IAMQ 234
K + + Q+ G+ YL S IHRDL N+ V N+ +KI D GLA I
Sbjct: 149 KDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMKIADFGLARDINNIDYY 205
Query: 235 QPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF---EYPYSECKNPAQIF 290
+ T + ++MAPE L++ Y D++SFG+ + E+ T YP + ++
Sbjct: 206 KKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 264
Query: 291 KKVTSGIKPASLAKVNDPQIKGFIEKCL--VPASERLSAKDLLKD 333
K+ KPA+ ++ + C VP S+R + K L++D
Sbjct: 265 KEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVED 304
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 124/285 (43%), Gaps = 51/285 (17%)
Query: 85 LGKGAFKTVYKAFDEFAGI------EVAWSRVKI--DDVLQLPGDLQKLYSEVHLLKSL- 135
LG+G F V A E GI E VK+ DD + DL L SE+ ++K +
Sbjct: 32 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATE--KDLSDLVSEMEMMKMIG 87
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY----------------RKKHKNVDI 179
K N++ + D V I E + GNLR+Y R + +
Sbjct: 88 KHKNIINLLGACTQDGPLYV--IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 145
Query: 180 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-----IAMQ 234
K + + Q+ G+ YL S IHRDL N+ V N+ +KI D GLA I
Sbjct: 146 KDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMKIADFGLARDINNIDYY 202
Query: 235 QPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF---EYPYSECKNPAQIF 290
+ T + ++MAPE L++ Y D++SFG+ + E+ T YP + ++
Sbjct: 203 KKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 261
Query: 291 KKVTSGIKPASLAKVNDPQIKGFIEKCL--VPASERLSAKDLLKD 333
K+ KPA+ ++ + C VP S+R + K L++D
Sbjct: 262 KEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVED 301
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 128/289 (44%), Gaps = 49/289 (16%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDL--QKLYSEVHLLKSLK 136
+R + LG+G F V+ G +RV I + PG + + E ++K L+
Sbjct: 11 LRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLR 62
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLV 194
+ +V+ Y ++ + ++TE + G+L + K K + + + + A QI G+
Sbjct: 63 HEKLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 119
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE 251
Y+ N +HRDL+ NI V G + K+ D GLA I + TAR P ++ APE
Sbjct: 120 YVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 176
Query: 252 --LYEEEYNELVDIYSFGMCILEMVT-FEYPYSECKNPAQIFKKVTSGIK-------PAS 301
LY + D++SFG+ + E+ T PY N ++ +V G + P S
Sbjct: 177 AALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCPPECPES 234
Query: 302 LAKV------NDPQIKGFIEKCLVPASERLSAKDLLKDPFLQVENQKEP 344
L + DP+ + P E L A L+D F E Q +P
Sbjct: 235 LHDLMCQCWRKDPEER--------PTFEYLQA--FLEDYFTSTEPQYQP 273
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 86/167 (51%), Gaps = 12/167 (7%)
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHG 192
+SL+ N+V+F + + + M E + G L + + + +Q++ G
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVM--EYASGGELFERICNAGRFSEDEARFFFQQLISG 127
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVNGNHG-EVKIGDLGLA---IAMQQPTARSVIGTPEFM 248
+ Y H+ + HRDLK +N ++G+ +KI D G + + QP +S +GTP ++
Sbjct: 128 VSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP--KSTVGTPAYI 183
Query: 249 APE-LYEEEYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 293
APE L ++EY+ ++ D++S G+ + M+ YP+ + + P K +
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 124/285 (43%), Gaps = 51/285 (17%)
Query: 85 LGKGAFKTVYKAFDEFAGI------EVAWSRVKI--DDVLQLPGDLQKLYSEVHLLKSL- 135
LG+G F V A E GI E VK+ DD + DL L SE+ ++K +
Sbjct: 30 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATE--KDLSDLVSEMEMMKMIG 85
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY----------------RKKHKNVDI 179
K N++ + D V I E + GNLR+Y R + +
Sbjct: 86 KHKNIINLLGACTQDGPLYV--IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 143
Query: 180 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-----IAMQ 234
K + + Q+ G+ YL S IHRDL N+ V N+ +KI D GLA I
Sbjct: 144 KDLVSCTYQLARGMEYLASQK--CIHRDLTARNVLVTENN-VMKIADFGLARDINNIDYY 200
Query: 235 QPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF---EYPYSECKNPAQIF 290
+ T + ++MAPE L++ Y D++SFG+ + E+ T YP + ++
Sbjct: 201 KKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 259
Query: 291 KKVTSGIKPASLAKVNDPQIKGFIEKCL--VPASERLSAKDLLKD 333
K+ KPA+ ++ + C VP S+R + K L++D
Sbjct: 260 KEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVED 299
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+V+G G+F VY+A +G VA I VLQ D + E+ +++ L N+V+
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQ---DKRFKNRELQIMRKLDHCNIVR 89
Query: 143 ----FYKSWVDDKKKTVNMITELFTSGNLR---QYRKKHKNVDIKVIKNWARQILHGLVY 195
FY S + +N++ + R Y + + + + +K + Q+ L Y
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPELY 253
+HS I HRD+K N+ ++ + +K+ D G A + +P S I + + APEL
Sbjct: 150 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICSRYYRAPELI 206
Query: 254 --EEEYNELVDIYSFGMCILEMV 274
+Y +D++S G + E++
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELL 229
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+V+G G+F VY+A +G VA I VLQ D + E+ +++ L N+V+
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQ---DKRFKNRELQIMRKLDHCNIVR 89
Query: 143 ----FYKSWVDDKKKTVNMITELFTSGNLR---QYRKKHKNVDIKVIKNWARQILHGLVY 195
FY S + +N++ + R Y + + + + +K + Q+ L Y
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPELY 253
+HS I HRD+K N+ ++ + +K+ D G A + +P S I + + APEL
Sbjct: 150 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICSRYYRAPELI 206
Query: 254 --EEEYNELVDIYSFGMCILEMV 274
+Y +D++S G + E++
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELL 229
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+V+G G+F VY+A +G VA I VLQ D + E+ +++ L N+V+
Sbjct: 45 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQ---DKRFKNRELQIMRKLDHCNIVR 96
Query: 143 ----FYKSWVDDKKKTVNMITELFTSGNLR---QYRKKHKNVDIKVIKNWARQILHGLVY 195
FY S + +N++ + R Y + + + + +K + Q+ L Y
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 156
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPELY 253
+HS I HRD+K N+ ++ + +K+ D G A + +P S I + + APEL
Sbjct: 157 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICSRYYRAPELI 213
Query: 254 --EEEYNELVDIYSFGMCILEMV 274
+Y +D++S G + E++
Sbjct: 214 FGATDYTSSIDVWSAGCVLAELL 236
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 111/249 (44%), Gaps = 19/249 (7%)
Query: 131 LLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQIL 190
+LKS +V+ + +++ + + M EL + + ++ + +++ I+
Sbjct: 77 VLKSHDCPYIVQCFGTFITNTDVFIAM--ELMGTCAEKLKKRMQGPIPERILGKMTVAIV 134
Query: 191 HGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR-SVIGTPEFMA 249
L YL + +IHRD+K NI ++ G++K+ D G++ + A+ G +MA
Sbjct: 135 KALYYLKEKHG-VIHRDVKPSNILLD-ERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMA 192
Query: 250 PELYEE------EYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG---IKPA 300
PE + +Y+ D++S G+ ++E+ T ++PY CK ++ KV + P
Sbjct: 193 PERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPG 252
Query: 301 SLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKDPFLQVENQKEPICDPLKLPIQSLKML 359
+ D Q F++ CL +R LL+ F++ E D +
Sbjct: 253 HMGFSGDFQ--SFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLE--VDVASWFKDVMAKT 308
Query: 360 RLPMSGPSS 368
P SGPSS
Sbjct: 309 ESPRSGPSS 317
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 96/203 (47%), Gaps = 8/203 (3%)
Query: 81 YDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNV 140
Y ++LGKG F V ++ G A +K +V+ ++ +E +L++ + +
Sbjct: 13 YLKLLGKGTFGKVILVKEKATGRYYAMKILK-KEVIVAKDEVAHTLTENRVLQNSRHPFL 71
Query: 141 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
S+ + + + E G L + + + + + +I+ L YLHS
Sbjct: 72 TALKYSFQTHDR--LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 129
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA--MQQPTARSVIGTPEFMAPELYEE-EY 257
+++RDLK +N+ ++ + G +KI D GL T + GTPE++APE+ E+ +Y
Sbjct: 130 N-VVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDY 187
Query: 258 NELVDIYSFGMCILEMVTFEYPY 280
VD + G+ + EM+ P+
Sbjct: 188 GRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+V+G G+F VY+A +G VA I VLQ D + E+ +++ L N+V+
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQ---DKRFKNRELQIMRKLDHCNIVR 82
Query: 143 ----FYKSWVDDKKKTVNMITELFTSGNLR---QYRKKHKNVDIKVIKNWARQILHGLVY 195
FY S + +N++ + R Y + + + + +K + Q+ L Y
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 142
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPELY 253
+HS I HRD+K N+ ++ + +K+ D G A + +P S I + + APEL
Sbjct: 143 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICSRYYRAPELI 199
Query: 254 --EEEYNELVDIYSFGMCILEMV 274
+Y +D++S G + E++
Sbjct: 200 FGATDYTSSIDVWSAGCVLAELL 222
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+V+G G+F VY+A +G VA I VLQ D + E+ +++ L N+V+
Sbjct: 34 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQ---DKRFKNRELQIMRKLDHCNIVR 85
Query: 143 ----FYKSWVDDKKKTVNMITELFTSGNLR---QYRKKHKNVDIKVIKNWARQILHGLVY 195
FY S + +N++ + R Y + + + + +K + Q+ L Y
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 145
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPELY 253
+HS I HRD+K N+ ++ + +K+ D G A + +P S I + + APEL
Sbjct: 146 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICSRYYRAPELI 202
Query: 254 --EEEYNELVDIYSFGMCILEMV 274
+Y +D++S G + E++
Sbjct: 203 FGATDYTSSIDVWSAGCVLAELL 225
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDL--QKLYSEVHLLKSLK 136
+R + LG+G F V+ G +RV I + PG + + E ++K L+
Sbjct: 13 LRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLR 64
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLV 194
+ +V+ Y ++ + ++TE + G+L + K K + + + + A QI G+
Sbjct: 65 HEKLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 121
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE 251
Y+ N +HRDL+ NI V G + K+ D GLA I + TAR P ++ APE
Sbjct: 122 YVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 178
Query: 252 --LYEEEYNELVDIYSFGMCILEMVT 275
LY + D++SFG+ + E+ T
Sbjct: 179 AALY-GRFTIKSDVWSFGILLTELTT 203
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 21/209 (10%)
Query: 79 VRYDEVLGKGAFKTVYKAF----DEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKS 134
+R +VLG GAF TVYK E I VA +K+ P +++ E +++
Sbjct: 19 LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVA---IKVLRENTSPKANKEILDEAYVMAG 75
Query: 135 LKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNWARQILHGL 193
+ V + + TV ++T+L G L + R+ + + + NW QI G+
Sbjct: 76 VGSPYVSRLLGICL---TSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGM 132
Query: 194 VYLHSHNPPIIHRDLKCDNIFVNG-NHGEVKIGDLGLA----IAMQQPTARSVIGTPEFM 248
YL ++HRDL N+ V NH VKI D GLA I + A ++M
Sbjct: 133 SYLEDVR--LVHRDLAARNVLVKSPNH--VKITDFGLARLLDIDETEYHADGGKVPIKWM 188
Query: 249 APE-LYEEEYNELVDIYSFGMCILEMVTF 276
A E + + D++S+G+ + E++TF
Sbjct: 189 ALESILRRRFTHQSDVWSYGVTVWELMTF 217
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+V+G G+F VY+A +G VA I VLQ D + E+ +++ L N+V+
Sbjct: 30 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQ---DKRFKNRELQIMRKLDHCNIVR 81
Query: 143 ----FYKSWVDDKKKTVNMITELFTSGNLR---QYRKKHKNVDIKVIKNWARQILHGLVY 195
FY S + +N++ + R Y + + + + +K + Q+ L Y
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 141
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPELY 253
+HS I HRD+K N+ ++ + +K+ D G A + +P S I + + APEL
Sbjct: 142 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICSRYYRAPELI 198
Query: 254 --EEEYNELVDIYSFGMCILEMV 274
+Y +D++S G + E++
Sbjct: 199 FGATDYTSSIDVWSAGCVLAELL 221
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 86/167 (51%), Gaps = 12/167 (7%)
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHG 192
+SL+ N+V+F + + + M E + G L + + + +Q++ G
Sbjct: 69 RSLRHPNIVRFKEVILTPTHLAIVM--EYASGGELFERICNAGRFSEDEARFFFQQLISG 126
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVNGNHG-EVKIGDLGLA---IAMQQPTARSVIGTPEFM 248
+ Y H+ + HRDLK +N ++G+ +KI D G + + QP +S +GTP ++
Sbjct: 127 VSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP--KSTVGTPAYI 182
Query: 249 APE-LYEEEYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 293
APE L ++EY+ ++ D++S G+ + M+ YP+ + + P K +
Sbjct: 183 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 229
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+V+G G+F VY+A +G VA I VLQ D + E+ +++ L N+V+
Sbjct: 39 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQ---DKRFKNRELQIMRKLDHCNIVR 90
Query: 143 ----FYKSWVDDKKKTVNMITELFTSGNLR---QYRKKHKNVDIKVIKNWARQILHGLVY 195
FY S + +N++ + R Y + + + + +K + Q+ L Y
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 150
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPELY 253
+HS I HRD+K N+ ++ + +K+ D G A + +P S I + + APEL
Sbjct: 151 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICSRYYRAPELI 207
Query: 254 --EEEYNELVDIYSFGMCILEMV 274
+Y +D++S G + E++
Sbjct: 208 FGATDYTSSIDVWSAGCVLAELL 230
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+V+G G+F VY+A +G VA I VLQ D + E+ +++ L N+V+
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQ---DKRFKNRELQIMRKLDHCNIVR 77
Query: 143 ----FYKSWVDDKKKTVNMITELFTSGNLR---QYRKKHKNVDIKVIKNWARQILHGLVY 195
FY S + +N++ + R Y + + + + +K + Q+ L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPELY 253
+HS I HRD+K N+ ++ + +K+ D G A + +P S I + + APEL
Sbjct: 138 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICSRYYRAPELI 194
Query: 254 --EEEYNELVDIYSFGMCILEMV 274
+Y +D++S G + E++
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELL 217
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDL--QKLYSEVHLLKSLK 136
+R + LG+G F V+ G +RV I + PG + + E ++K L+
Sbjct: 186 LRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLR 237
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLV 194
+ +V+ Y ++ + ++TE + G+L + K K + + + + A QI G+
Sbjct: 238 HEKLVQLYAVVSEEP---IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 294
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE 251
Y+ N +HRDL+ NI V G + K+ D GLA I + TAR P ++ APE
Sbjct: 295 YVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 351
Query: 252 --LYEEEYNELVDIYSFGMCILEMVT 275
LY + D++SFG+ + E+ T
Sbjct: 352 AALY-GRFTIKSDVWSFGILLTELTT 376
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+V+G G+F VY+A +G VA I VLQ D + E+ +++ L N+V+
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQ---DKRFKNRELQIMRKLDHCNIVR 77
Query: 143 ----FYKSWVDDKKKTVNMITELFTSGNLR---QYRKKHKNVDIKVIKNWARQILHGLVY 195
FY S + +N++ + R Y + + + + +K + Q+ L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPELY 253
+HS I HRD+K N+ ++ + +K+ D G A + +P S I + + APEL
Sbjct: 138 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICSRYYRAPELI 194
Query: 254 --EEEYNELVDIYSFGMCILEMV 274
+Y +D++S G + E++
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELL 217
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+V+G G+F VY+A +G VA I VLQ D + E+ +++ L N+V+
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQ---DKRFKNRELQIMRKLDHCNIVR 77
Query: 143 ----FYKSWVDDKKKTVNMITELFTSGNLR---QYRKKHKNVDIKVIKNWARQILHGLVY 195
FY S + +N++ + R Y + + + + +K + Q+ L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPELY 253
+HS I HRD+K N+ ++ + +K+ D G A + +P S I + + APEL
Sbjct: 138 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICSRYYRAPELI 194
Query: 254 --EEEYNELVDIYSFGMCILEMV 274
+Y +D++S G + E++
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELL 217
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+V+G G+F VY+A +G VA I VLQ D + E+ +++ L N+V+
Sbjct: 27 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQ---DKRFKNRELQIMRKLDHCNIVR 78
Query: 143 ----FYKSWVDDKKKTVNMITELFTSGNLR---QYRKKHKNVDIKVIKNWARQILHGLVY 195
FY S + +N++ + R Y + + + + +K + Q+ L Y
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 138
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPELY 253
+HS I HRD+K N+ ++ + +K+ D G A + +P S I + + APEL
Sbjct: 139 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICSRYYRAPELI 195
Query: 254 --EEEYNELVDIYSFGMCILEMV 274
+Y +D++S G + E++
Sbjct: 196 FGATDYTSSIDVWSAGCVLAELL 218
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 124/285 (43%), Gaps = 51/285 (17%)
Query: 85 LGKGAFKTVYKAFDEFAGI------EVAWSRVKI--DDVLQLPGDLQKLYSEVHLLKSL- 135
LG+GAF V A E GI E VK+ DD + DL L SE+ ++K +
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATE--KDLSDLVSEMEMMKMIG 98
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY----------------RKKHKNVDI 179
K N++ + D V I + GNLR+Y R + +
Sbjct: 99 KHKNIINLLGACTQDGPLYV--IVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 180 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-----IAMQ 234
K + + Q+ G+ YL S IHRDL N+ V N+ +KI D GLA I
Sbjct: 157 KDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMKIADFGLARDINNIDYY 213
Query: 235 QPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF---EYPYSECKNPAQIF 290
+ T + ++MAPE L++ Y D++SFG+ + E+ T YP + ++
Sbjct: 214 KKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 272
Query: 291 KKVTSGIKPASLAKVNDPQIKGFIEKCL--VPASERLSAKDLLKD 333
K+ KPA+ ++ + C VP S+R + K L++D
Sbjct: 273 KEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVED 312
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 73 DPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLL 132
D RY + + +G+GA+ V A+D VA ++ + Q+ E+ +L
Sbjct: 40 DVGPRYTQL-QYIGEGAYGMVSSAYDHVRKTRVAIKKI---SPFEHQTYCQRTLREIQIL 95
Query: 133 KSLKDDNVV---KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQI 189
+ +NV+ ++ + + V ++ +L + + + + + D I + QI
Sbjct: 96 LRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSND--HICYFLYQI 153
Query: 190 LHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT------ARSVIG 243
L GL Y+HS N ++HRDLK N+ +N ++KI D GLA + P +
Sbjct: 154 LRGLKYIHSAN--VLHRDLKPSNLLINTT-CDLKICDFGLA-RIADPEHDHTGFLTEXVA 209
Query: 244 TPEFMAPE--LYEEEYNELVDIYSFGMCILEMVT 275
T + APE L + Y + +DI+S G + EM++
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 21/202 (10%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV- 141
+V+G G+F V++A V V I VLQ D + E+ +++ +K NVV
Sbjct: 46 KVIGNGSFGVVFQA------KLVESDEVAIKKVLQ---DKRFKNRELQIMRIVKHPNVVD 96
Query: 142 --KFYKSWVDDKKKT-VNMITELFTSGNLR---QYRKKHKNVDIKVIKNWARQILHGLVY 195
F+ S D K + +N++ E R Y K + + + +IK + Q+L L Y
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAY 156
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-IAMQQPTARSVIGTPEFMAPELY- 253
+HS I HRD+K N+ ++ G +K+ D G A I + S I + + APEL
Sbjct: 157 IHSIG--ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIF 214
Query: 254 -EEEYNELVDIYSFGMCILEMV 274
Y +DI+S G + E++
Sbjct: 215 GATNYTTNIDIWSTGCVMAELM 236
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 22/203 (10%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+V+G G+F VY+A +G VA I VLQ G K E+ +++ L N+V+
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQ--GKAFK-NRELQIMRKLDHCNIVR 77
Query: 143 ----FYKSWVDDKKKTVNMITELFTSGNLR---QYRKKHKNVDIKVIKNWARQILHGLVY 195
FY S + +N++ + + R Y + + + + +K + Q+ L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPELY 253
+HS I HRD+K N+ ++ + +K+ D G A + +P S I + + APEL
Sbjct: 138 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICSRYYRAPELI 194
Query: 254 --EEEYNELVDIYSFGMCILEMV 274
+Y +D++S G + E++
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELL 217
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 128/289 (44%), Gaps = 49/289 (16%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDL--QKLYSEVHLLKSLK 136
+R + LG+G F V+ G +RV I + PG + + E ++K ++
Sbjct: 20 LRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKIR 71
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLV 194
+ +V+ Y ++ + ++TE + G+L + K K + + + + A QI G+
Sbjct: 72 HEKLVQLYAV---VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE 251
Y+ N +HRDL+ NI V G + K+ D GLA I + TAR P ++ APE
Sbjct: 129 YVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 252 --LYEEEYNELVDIYSFGMCILEMVT-FEYPYSECKNPAQIFKKVTSGIK-------PAS 301
LY + D++SFG+ + E+ T PY N ++ +V G + P S
Sbjct: 186 AALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCPPECPES 243
Query: 302 LAKV------NDPQIKGFIEKCLVPASERLSAKDLLKDPFLQVENQKEP 344
L + DP+ + P E L A L+D F E Q +P
Sbjct: 244 LHDLMCQCWRKDPEER--------PTFEYLQA--FLEDYFTSTEPQYQP 282
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 78/149 (52%), Gaps = 14/149 (9%)
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
VV+ + ++ DDK + M+ E G+L + +V K K + +++ L +HS
Sbjct: 137 VVQLFCAFQDDK--YLYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSM 193
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT---ARSVIGTPEFMAPELYEEE 256
+IHRD+K DN+ ++ HG +K+ D G + M + + +GTP++++PE+ + +
Sbjct: 194 G--LIHRDVKPDNMLLD-KHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQ 250
Query: 257 -----YNELVDIYSFGMCILEMVTFEYPY 280
Y D +S G+ + EM+ + P+
Sbjct: 251 GGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 127/289 (43%), Gaps = 49/289 (16%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDL--QKLYSEVHLLKSLK 136
+R + LG+G F V+ G +RV I + PG + + E ++K L+
Sbjct: 20 LRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLR 71
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLV 194
+ +V+ Y ++ + ++TE + G L + K K + + + + A QI G+
Sbjct: 72 HEKLVQLYAV---VSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE 251
Y+ N +HRDL+ NI V G + K+ D GLA I + TAR P ++ APE
Sbjct: 129 YVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 252 --LYEEEYNELVDIYSFGMCILEMVT-FEYPYSECKNPAQIFKKVTSGIK-------PAS 301
LY + D++SFG+ + E+ T PY N ++ +V G + P S
Sbjct: 186 AALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCPPECPES 243
Query: 302 LAKV------NDPQIKGFIEKCLVPASERLSAKDLLKDPFLQVENQKEP 344
L + DP+ + P E L A L+D F E Q +P
Sbjct: 244 LHDLMCQCWRKDPEER--------PTFEYLQA--FLEDYFTSTEPQYQP 282
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 124/285 (43%), Gaps = 51/285 (17%)
Query: 85 LGKGAFKTVYKAFDEFAGI------EVAWSRVKI--DDVLQLPGDLQKLYSEVHLLKSL- 135
LG+GAF V A E GI E VK+ DD + DL L SE+ ++K +
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATE--KDLSDLVSEMEMMKMIG 98
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY----------------RKKHKNVDI 179
K N++ + D V I + GNLR+Y R + +
Sbjct: 99 KHKNIINLLGACTQDGPLYV--IVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 180 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-----IAMQ 234
K + + Q+ G+ YL S IHRDL N+ V N+ +KI D GLA I
Sbjct: 157 KDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENN-VMKIADFGLARDINNIDYY 213
Query: 235 QPTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF---EYPYSECKNPAQIF 290
+ T + ++MAPE L++ Y D++SFG+ + E+ T YP + ++
Sbjct: 214 KKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 272
Query: 291 KKVTSGIKPASLAKVNDPQIKGFIEKCL--VPASERLSAKDLLKD 333
K+ KPA+ ++ + C VP S+R + K L++D
Sbjct: 273 KEGHRMDKPANCTN----ELYMMMRDCWHAVP-SQRPTFKQLVED 312
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 123/262 (46%), Gaps = 25/262 (9%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ----LPGDLQKLYSEVHLLKSLKDDNV 140
LG GAF V+ A D+ EV +K + VL+ L K+ E+ +L ++ N+
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 141 VKFYKSWVDDKKKTVNMITELFTSG-NLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
+K + + + ++ E SG +L + +H +D + RQ++ + YL
Sbjct: 92 IKVLD--IFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK 149
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTA-RSVIGTPEFMAPE-LYEEEY 257
+ IIHRD+K +NI + + +K+ D G A +++ + GT E+ APE L Y
Sbjct: 150 D--IIHRDIKDENIVIAEDF-TIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPY 206
Query: 258 N--ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
EL +++S G+ + +V E P+ E + + V + I P L ++ +
Sbjct: 207 RGPEL-EMWSLGVTLYTLVFEENPFCELE------ETVEAAIHPPYLV---SKELMSLVS 256
Query: 316 KCLVPASERLSA-KDLLKDPFL 336
L P ER + + L+ DP++
Sbjct: 257 GLLQPVPERRTTLEKLVTDPWV 278
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 22/203 (10%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+V+G G+F VY+A +G VA I VLQ D + E+ +++ L N+V+
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQ---DKRFKNRELQIMRKLDHCNIVR 77
Query: 143 ----FYKSWVDDKKKTVNMITELFTSGNLR---QYRKKHKNVDIKVIKNWARQILHGLVY 195
FY S +N++ + R Y + + + + +K + Q+ L Y
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPELY 253
+HS I HRD+K N+ ++ + +K+ D G A + +P S I + + APEL
Sbjct: 138 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICSRYYRAPELI 194
Query: 254 --EEEYNELVDIYSFGMCILEMV 274
+Y +D++S G + E++
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELL 217
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 16/198 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
LG G + VY + + VA +K D + ++++ E ++K +K N+V+
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEIKHPNLVQLL 94
Query: 145 KSWVDDKKKTVNMITELFTSGNLRQYRKK--HKNVDIKVIKNWARQILHGLVYLHSHNPP 202
V + ++TE GNL Y ++ + V V+ A QI + YL N
Sbjct: 95 G--VCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKN-- 150
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP---EFMAPE-LYEEEYN 258
IHRDL N V NH VK+ D GL+ M T + G ++ APE L ++
Sbjct: 151 FIHRDLAARNCLVGENH-VVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFS 209
Query: 259 ELVDIYSFGMCILEMVTF 276
D+++FG+ + E+ T+
Sbjct: 210 IKSDVWAFGVLLWEIATY 227
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 115/275 (41%), Gaps = 21/275 (7%)
Query: 80 RYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLP--GDLQKLYSEVHLLKSLK- 136
R +LGKG F TV+ ++VA + + VL D EV LL +
Sbjct: 34 RLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGA 93
Query: 137 ---DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGL 193
V++ W + ++ + ++ + +L Y + + + + Q++ +
Sbjct: 94 GGGHPGVIRLL-DWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAI 152
Query: 194 VYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPE-L 252
+ HS ++HRD+K +NI ++ G K+ D G + GT + PE +
Sbjct: 153 QHCHSRG--VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWI 210
Query: 253 YEEEYNEL-VDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIK 311
+Y+ L ++S G+ + +MV + P+ + + + + P A
Sbjct: 211 SRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVSPDCCA-------- 262
Query: 312 GFIEKCLVP-ASERLSAKDLLKDPFLQVENQKEPI 345
I +CL P S R S +++L DP++Q + P+
Sbjct: 263 -LIRRCLAPKPSSRPSLEEILLDPWMQTPAEDVPL 296
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 127/289 (43%), Gaps = 49/289 (16%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDL--QKLYSEVHLLKSLK 136
+R + LG+G F V+ G +RV I + PG + + E ++K L+
Sbjct: 20 LRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLR 71
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLV 194
+ +V+ Y ++ + ++ E + G+L + K K + + + + A QI G+
Sbjct: 72 HEKLVQLYAV---VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE 251
Y+ N +HRDL+ NI V G + K+ D GLA I + TAR P ++ APE
Sbjct: 129 YVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPE 185
Query: 252 --LYEEEYNELVDIYSFGMCILEMVT-FEYPYSECKNPAQIFKKVTSGIK-------PAS 301
LY + D++SFG+ + E+ T PY N ++ +V G + P S
Sbjct: 186 AALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCPPECPES 243
Query: 302 LAKV------NDPQIKGFIEKCLVPASERLSAKDLLKDPFLQVENQKEP 344
L + DP+ + P E L A L+D F E Q +P
Sbjct: 244 LHDLMCQCWRKDPEER--------PTFEYLQA--FLEDYFTSTEPQYQP 282
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 15/217 (6%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDD 138
V+ ++V+G G F V + G + +K + SE ++
Sbjct: 35 VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHP 94
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNWARQILHGLVYLH 197
NV+ V K V +ITE +G+L + R+ + + R I G+ YL
Sbjct: 95 NVIHL--EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA 152
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ----QPTARSVIGTP---EFMAP 250
N +HRDL NI VN N K+ D GL+ ++ PT S +G + AP
Sbjct: 153 DMN--YVHRDLAARNILVNSNL-VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 209
Query: 251 ELYE-EEYNELVDIYSFGMCILEMVTF-EYPYSECKN 285
E + ++ D++S+G+ + E++++ E PY + N
Sbjct: 210 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN 246
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 127/284 (44%), Gaps = 31/284 (10%)
Query: 76 GRYVRYD--EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ----LPGDLQKL---- 125
G Y Y+ E+LG+G V + + E A VKI DV ++Q+L
Sbjct: 1 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYA---VKIIDVTGGGSFSAEEVQELREAT 57
Query: 126 YSEVHLLKSLKDD-NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKN 184
EV +L+ + N+++ ++ + ++ +L G L Y + + K +
Sbjct: 58 LKEVDILRKVSGHPNIIQLKDTY--ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK 115
Query: 185 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ-QPTARSVIG 243
R +L + LH N I+HRDLK +NI ++ + +K+ D G + + R V G
Sbjct: 116 IMRALLEVICALHKLN--IVHRDLKPENILLDDDMN-IKLTDFGFSCQLDPGEKLREVCG 172
Query: 244 TPEFMAPELYEEE-------YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
TP ++APE+ E Y + VD++S G+ + ++ P+ K + + + SG
Sbjct: 173 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ-MLMLRMIMSG 231
Query: 297 IKPASLAKVND--PQIKGFIEKCL-VPASERLSAKDLLKDPFLQ 337
+ +D +K + + L V +R +A++ L PF Q
Sbjct: 232 NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 275
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 127/284 (44%), Gaps = 31/284 (10%)
Query: 76 GRYVRYD--EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ----LPGDLQKL---- 125
G Y Y+ E+LG+G V + + E A VKI DV ++Q+L
Sbjct: 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYA---VKIIDVTGGGSFSAEEVQELREAT 70
Query: 126 YSEVHLLKSLKDD-NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKN 184
EV +L+ + N+++ ++ + ++ +L G L Y + + K +
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTY--ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK 128
Query: 185 WARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ-QPTARSVIG 243
R +L + LH N I+HRDLK +NI ++ + +K+ D G + + R V G
Sbjct: 129 IMRALLEVICALHKLN--IVHRDLKPENILLDDDMN-IKLTDFGFSCQLDPGEKLREVCG 185
Query: 244 TPEFMAPELYEEE-------YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
TP ++APE+ E Y + VD++S G+ + ++ P+ K + + + SG
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ-MLMLRMIMSG 244
Query: 297 IKPASLAKVND--PQIKGFIEKCL-VPASERLSAKDLLKDPFLQ 337
+ +D +K + + L V +R +A++ L PF Q
Sbjct: 245 NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 23/166 (13%)
Query: 188 QILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ------------ 235
QI + +LHS ++HRDLK NIF + VK+GD GL AM Q
Sbjct: 172 QIAEAVEFLHSKG--LMHRDLKPSNIFFTMD-DVVKVGDFGLVTAMDQDEEEQTVLTPMP 228
Query: 236 --PTARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKK 292
T +GT +M+PE ++ Y+ VDI+S G+ + E++ Y +S +I
Sbjct: 229 AYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL---YSFSTQMERVRIITD 285
Query: 293 VTSGIKPASLAKVNDPQIKGFIEKCLVPA-SERLSAKDLLKDPFLQ 337
V +K L PQ ++ L P+ +ER A D++++ +
Sbjct: 286 V-RNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFE 330
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 118/266 (44%), Gaps = 29/266 (10%)
Query: 84 VLGKGAFKTVYKAFDEFAGIEVAWSRV---KIDDVLQLPGDLQKLYSEVHLLKSLKD--D 138
+LG G F +VY + VA V +I D +LP ++ EV LLK +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 69
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 198
V++ W + V ++ +L + + + ++ +++ Q+L + H
Sbjct: 70 GVIRLL-DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV--RHC 126
Query: 199 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL--YEEE 256
HN ++HRD+K +NI ++ N GE+K+ D G ++ GT + PE Y
Sbjct: 127 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRY 186
Query: 257 YNELVDIYSFGMCILEMVTFEYPYSECKN--PAQIF--KKVTSGIKPASLAKVNDPQIKG 312
+ ++S G+ + +MV + P+ + Q+F ++V+S + +
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSS-------------ECQH 233
Query: 313 FIEKCL-VPASERLSAKDLLKDPFLQ 337
I CL + S+R + +++ P++Q
Sbjct: 234 LIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+V+G G+F VY+A +G VA I VLQ G K E+ +++ L N+V+
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQ--GKAFK-NRELQIMRKLDHCNIVR 77
Query: 143 ----FYKSWVDDKKKTVNMITELFTSGNLR---QYRKKHKNVDIKVIKNWARQILHGLVY 195
FY S + +N++ + R Y + + + + +K + Q+ L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPELY 253
+HS I HRD+K N+ ++ + +K+ D G A + +P S I + + APEL
Sbjct: 138 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICSRYYRAPELI 194
Query: 254 --EEEYNELVDIYSFGMCILEMV 274
+Y +D++S G + E++
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELL 217
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+V+G G+F VY+A +G VA I VLQ G K E+ +++ L N+V+
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVA-----IKKVLQ--GKAFK-NRELQIMRKLDHCNIVR 77
Query: 143 ----FYKSWVDDKKKTVNMITELFTSGNLR---QYRKKHKNVDIKVIKNWARQILHGLVY 195
FY S + +N++ + R Y + + + + +K + Q+ L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPELY 253
+HS I HRD+K N+ ++ + +K+ D G A + +P S I + + APEL
Sbjct: 138 IHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICSRYYRAPELI 194
Query: 254 --EEEYNELVDIYSFGMCILEMV 274
+Y +D++S G + E++
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELL 217
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 18/207 (8%)
Query: 84 VLGKGAFKTVYKAFDEFA-GIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+LG+G F VYK A G VA R+K + G+LQ +EV ++ N+++
Sbjct: 37 ILGRGGFGKVYKG--RLADGXLVAVKRLKEERTQ--GGELQ-FQTEVEMISMAVHRNLLR 91
Query: 143 FYKSWVDDKKKTVNMITELFTSGN----LRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 198
+ ++ ++ +G+ LR+ + +D + A GL YLH
Sbjct: 92 LRGFCMTPTERL--LVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHD 149
Query: 199 H-NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM---QQPTARSVIGTPEFMAPE-LY 253
H +P IIHRD+K NI ++ E +GD GLA M +V G +APE L
Sbjct: 150 HCDPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLS 208
Query: 254 EEEYNELVDIYSFGMCILEMVTFEYPY 280
+ +E D++ +G+ +LE++T + +
Sbjct: 209 TGKSSEKTDVFGYGVMLLELITGQRAF 235
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 118/266 (44%), Gaps = 29/266 (10%)
Query: 84 VLGKGAFKTVYKAFDEFAGIEVAWSRV---KIDDVLQLPGDLQKLYSEVHLLKSLKD--D 138
+LG G F +VY + VA V +I D +LP ++ EV LLK +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 69
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 198
V++ W + V ++ +L + + + ++ +++ Q+L + H
Sbjct: 70 GVIRLL-DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV--RHC 126
Query: 199 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL--YEEE 256
HN ++HRD+K +NI ++ N GE+K+ D G ++ GT + PE Y
Sbjct: 127 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRY 186
Query: 257 YNELVDIYSFGMCILEMVTFEYPYSECKN--PAQIF--KKVTSGIKPASLAKVNDPQIKG 312
+ ++S G+ + +MV + P+ + Q+F ++V+S + +
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS-------------ECQH 233
Query: 313 FIEKCL-VPASERLSAKDLLKDPFLQ 337
I CL + S+R + +++ P++Q
Sbjct: 234 LIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 131/316 (41%), Gaps = 63/316 (19%)
Query: 84 VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKF 143
+LG+GA+ V A + G VA +++ D P + E+ +LK K +N++
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDK---PLFALRTLREIKILKHFKHENIITI 74
Query: 144 YKSWVDDKKKTVN---MITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ D + N +I EL + R + + D I+ + Q L + LH N
Sbjct: 75 FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDD--HIQYFIYQTLRAVKVLHGSN 132
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM------------QQPTARSVIGTPEFM 248
+IHRDLK N+ +N N ++K+ D GLA + QQ + T +
Sbjct: 133 --VIHRDLKPSNLLINSN-CDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYR 189
Query: 249 APE--LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQ----IFKKVTSGIKPASL 302
APE L +Y+ +D++S G CIL + P ++ IF + + L
Sbjct: 190 APEVMLTSAKYSRAMDVWSCG-CILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDL 248
Query: 303 AKVNDPQIKGFIEKC-LVPA--------------------------SERLSAKDLLKDPF 335
+ P+ + +I+ + PA ++R++AK+ L+ P+
Sbjct: 249 RCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308
Query: 336 LQV------ENQKEPI 345
LQ E + EPI
Sbjct: 309 LQTYHDPNDEPEGEPI 324
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDL--QKLYSEVHLLKSLK 136
+R + LG+G F V+ G +RV I + PG + + E ++K L+
Sbjct: 17 LRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLR 68
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLV 194
+ +V+ Y ++ + ++TE G+L + K K + + + + + QI G+
Sbjct: 69 HEKLVQLYAV---VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMA 125
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE 251
Y+ N +HRDL+ NI V G + K+ D GLA I + TAR P ++ APE
Sbjct: 126 YVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPE 182
Query: 252 --LYEEEYNELVDIYSFGMCILEMVT 275
LY + D++SFG+ + E+ T
Sbjct: 183 AALY-GRFTIKSDVWSFGILLTELTT 207
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 127/289 (43%), Gaps = 49/289 (16%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDL--QKLYSEVHLLKSLK 136
+R + LG+G F V+ G +RV I + PG + + E ++K L+
Sbjct: 20 LRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLR 71
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLV 194
+ +V+ Y ++ + ++ E + G+L + K K + + + + A QI G+
Sbjct: 72 HEKLVQLYAV---VSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE 251
Y+ N +HRDL+ NI V G + K+ D GLA I + TAR P ++ APE
Sbjct: 129 YVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 252 --LYEEEYNELVDIYSFGMCILEMVT-FEYPYSECKNPAQIFKKVTSGIK-------PAS 301
LY + D++SFG+ + E+ T PY N ++ +V G + P S
Sbjct: 186 AALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCPPECPES 243
Query: 302 LAKV------NDPQIKGFIEKCLVPASERLSAKDLLKDPFLQVENQKEP 344
L + DP+ + P E L A L+D F E Q +P
Sbjct: 244 LHDLMCQCWRKDPEER--------PTFEYLQA--FLEDYFTSTEPQYQP 282
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 127/289 (43%), Gaps = 49/289 (16%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDL--QKLYSEVHLLKSLK 136
+R + LG+G F V+ G +RV I + PG + + E ++K L+
Sbjct: 20 LRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLR 71
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLV 194
+ +V+ Y ++ + ++ E + G+L + K K + + + + A QI G+
Sbjct: 72 HEKLVQLYAV---VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE 251
Y+ N +HRDL+ NI V G + K+ D GLA I + TAR P ++ APE
Sbjct: 129 YVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 252 --LYEEEYNELVDIYSFGMCILEMVT-FEYPYSECKNPAQIFKKVTSGIK-------PAS 301
LY + D++SFG+ + E+ T PY N ++ +V G + P S
Sbjct: 186 AALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCPPECPES 243
Query: 302 LAKV------NDPQIKGFIEKCLVPASERLSAKDLLKDPFLQVENQKEP 344
L + DP+ + P E L A L+D F E Q +P
Sbjct: 244 LHDLMCQCWRKDPEER--------PTFEYLQA--FLEDYFTSTEPQYQP 282
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDL--QKLYSEVHLLKSLK 136
+R + LG+G F V+ G +RV I + PG + + E ++K L+
Sbjct: 17 LRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLR 68
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLV 194
+ +V+ Y ++ + ++TE G+L + K K + + + + + QI G+
Sbjct: 69 HEKLVQLYAVVSEEP---IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMA 125
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE 251
Y+ N +HRDL+ NI V G + K+ D GLA I + TAR P ++ APE
Sbjct: 126 YVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 182
Query: 252 --LYEEEYNELVDIYSFGMCILEMVT 275
LY + D++SFG+ + E+ T
Sbjct: 183 AALY-GRFTIKSDVWSFGILLTELTT 207
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 131/316 (41%), Gaps = 63/316 (19%)
Query: 84 VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKF 143
+LG+GA+ V A + G VA +++ D P + E+ +LK K +N++
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDK---PLFALRTLREIKILKHFKHENIITI 74
Query: 144 YKSWVDDKKKTVN---MITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ D + N +I EL + R + + D I+ + Q L + LH N
Sbjct: 75 FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDD--HIQYFIYQTLRAVKVLHGSN 132
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM------------QQPTARSVIGTPEFM 248
+IHRDLK N+ +N N ++K+ D GLA + QQ + T +
Sbjct: 133 --VIHRDLKPSNLLINSN-CDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYR 189
Query: 249 APE--LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQ----IFKKVTSGIKPASL 302
APE L +Y+ +D++S G CIL + P ++ IF + + L
Sbjct: 190 APEVMLTSAKYSRAMDVWSCG-CILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDL 248
Query: 303 AKVNDPQIKGFIEKC-LVPA--------------------------SERLSAKDLLKDPF 335
+ P+ + +I+ + PA ++R++AK+ L+ P+
Sbjct: 249 RCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308
Query: 336 LQV------ENQKEPI 345
LQ E + EPI
Sbjct: 309 LQTYHDPNDEPEGEPI 324
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 105/235 (44%), Gaps = 16/235 (6%)
Query: 61 EPPDADSDFVEKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPG 120
+P +A +F K+ YV+ +EV+G G F V + + G + + +K
Sbjct: 1 DPNEAVREFA-KEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTER 59
Query: 121 DLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDI 179
++ SE ++ + N+++ V V ++TE +G L + R +
Sbjct: 60 QRREFLSEASIMGQFEHPNIIRLEG--VVTNSMPVMILTEFMENGALDSFLRLNDGQFTV 117
Query: 180 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ---- 235
+ R I G+ YL + +HRDL NI VN N K+ D GL+ +++
Sbjct: 118 IQLVGMLRGIASGMRYLAEMS--YVHRDLAARNILVNSNL-VCKVSDFGLSRFLEENSSD 174
Query: 236 PTARSVIGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKN 285
PT S +G + APE + ++ D +S+G+ + E+++F E PY + N
Sbjct: 175 PTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN 229
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 126/281 (44%), Gaps = 33/281 (11%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDL--QKLYSEVHLLKSLK 136
+R + LG+G F V+ G +RV I + PG + + E ++K L+
Sbjct: 186 LRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLR 237
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLV 194
+ +V+ Y ++ + ++ E + G+L + K K + + + + A QI G+
Sbjct: 238 HEKLVQLYAVVSEEP---IYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 294
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE 251
Y+ N +HRDL+ NI V G + K+ D GLA I + TAR P ++ APE
Sbjct: 295 YVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 351
Query: 252 --LYEEEYNELVDIYSFGMCILEMVT-FEYPYSECKNPAQIFKKVTSGIK----PASLAK 304
LY + D++SFG+ + E+ T PY N ++ +V G + P
Sbjct: 352 AALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCPPECPES 409
Query: 305 VNDPQIKGFI-EKCLVPASERLSAKDLLKDPFLQVENQKEP 344
++D + + E P E L A L+D F E Q +P
Sbjct: 410 LHDLMCQCWRKEPEERPTFEYLQA--FLEDYFTSTEPQXQP 448
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 11/204 (5%)
Query: 84 VLGKGAFKTVYKAFDEFAGIEVAWSRV---KIDDVLQLPGDLQKLYSEVHLLKSLKD--D 138
+LG G F +VY + VA V +I D +LP ++ EV LLK +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-TRVPMEVVLLKKVSSGFS 69
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 198
V++ W + V ++ +L + + + ++ +++ Q+L + H
Sbjct: 70 GVIRLL-DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV--RHC 126
Query: 199 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL--YEEE 256
HN ++HRD+K +NI ++ N GE+K+ D G ++ GT + PE Y
Sbjct: 127 HNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRY 186
Query: 257 YNELVDIYSFGMCILEMVTFEYPY 280
+ ++S G+ + +MV + P+
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPF 210
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 133/314 (42%), Gaps = 44/314 (14%)
Query: 52 FLSGMLGTAEPPDADSDFVEKDPSGRYVRYDEVLGKGAFKTVYKA----FDEFAGIEVAW 107
+ GML + D + P R V + LG+GAF V A D+ V
Sbjct: 45 YFQGMLAGVSEYELPEDPRWELPRDRLV-LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTK 103
Query: 108 SRVKIDDVLQLPGDLQKLYSEVHLLKSL-KDDNVVKFYKSWVDDKKKTVNMITELFTSGN 166
VK+ DL L SE+ ++K + K N++ + D V I E + GN
Sbjct: 104 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV--IVEYASKGN 161
Query: 167 LRQYRKKHK----------------NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKC 210
LR+Y + + + K + + A Q+ G+ YL S IHRDL
Sbjct: 162 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAA 219
Query: 211 DNIFVNGNHGEVKIGDLGLA-----IAMQQPTARSVIGTPEFMAPE-LYEEEYNELVDIY 264
N+ V ++ +KI D GLA I + T + ++MAPE L++ Y D++
Sbjct: 220 RNVLVTEDN-VMKIADFGLARDIHHIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVW 277
Query: 265 SFGMCILEMVTF---EYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL--V 319
SFG+ + E+ T YP + ++ K+ KP++ ++ + C V
Sbjct: 278 SFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTN----ELYMMMRDCWHAV 333
Query: 320 PASERLSAKDLLKD 333
P S+R + K L++D
Sbjct: 334 P-SQRPTFKQLVED 346
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 33/219 (15%)
Query: 85 LGKGAFKTVYKA----FDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL-KDDN 139
LG+GAF V A D+ V VK+ DL L SE+ ++K + K N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK----------------NVDIKVIK 183
++ + D V I E + GNLR+Y + + + K +
Sbjct: 96 IINLLGACTQDGPLYV--IVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 184 NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-----IAMQQPTA 238
+ A Q+ G+ YL S IHRDL N+ V ++ +KI D GLA I + T
Sbjct: 154 SCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VMKIADFGLARDIHHIDXXKKTT 210
Query: 239 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 276
+ ++MAPE L++ Y D++SFG+ + E+ T
Sbjct: 211 NGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 248
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 131/316 (41%), Gaps = 63/316 (19%)
Query: 84 VLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKF 143
+LG+GA+ V A + G VA +++ D P + E+ +LK K +N++
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDK---PLFALRTLREIKILKHFKHENIITI 74
Query: 144 YKSWVDDKKKTVN---MITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ D + N +I EL + R + + D I+ + Q L + LH N
Sbjct: 75 FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDD--HIQYFIYQTLRAVKVLHGSN 132
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM------------QQPTARSVIGTPEFM 248
+IHRDLK N+ +N N ++K+ D GLA + QQ + T +
Sbjct: 133 --VIHRDLKPSNLLINSN-CDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYR 189
Query: 249 APE--LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQ----IFKKVTSGIKPASL 302
APE L +Y+ +D++S G CIL + P ++ IF + + L
Sbjct: 190 APEVMLTSAKYSRAMDVWSCG-CILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDL 248
Query: 303 AKVNDPQIKGFIEKC-LVPA--------------------------SERLSAKDLLKDPF 335
+ P+ + +I+ + PA ++R++AK+ L+ P+
Sbjct: 249 RCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308
Query: 336 LQV------ENQKEPI 345
LQ E + EPI
Sbjct: 309 LQTYHDPNDEPEGEPI 324
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 76/144 (52%), Gaps = 8/144 (5%)
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
VVK + ++ + K + +I + G+L K + +K + ++ GL +LHS
Sbjct: 92 VVKLHYAFQTEGK--LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSL 149
Query: 200 NPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM--QQPTARSVIGTPEFMAPELYEEE- 256
II+RDLK +NI ++ G +K+ D GL+ + A S GT E+MAPE+ +
Sbjct: 150 G--IIYRDLKPENILLD-EEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQG 206
Query: 257 YNELVDIYSFGMCILEMVTFEYPY 280
++ D +S+G+ + EM+T P+
Sbjct: 207 HSHSADWWSYGVLMFEMLTGSLPF 230
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 122/268 (45%), Gaps = 42/268 (15%)
Query: 65 ADSDFVEKDPSGRYVRYDEVLGK----GAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ--L 118
D+ + +DP + R + VLGK G F V KA ++ V + + +
Sbjct: 7 VDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS 66
Query: 119 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV- 177
P +L+ L SE ++LK + +V+K Y + D + +I E G+LR + ++ + V
Sbjct: 67 PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG--PLLLIVEYAKYGSLRGFLRESRKVG 124
Query: 178 ------------------DIKVIK-----NWARQILHGLVYLHSHNPPIIHRDLKCDNIF 214
D + + ++A QI G+ YL + ++HRDL NI
Sbjct: 125 PGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS--LVHRDLAARNIL 182
Query: 215 VNGNHGEVKIGDLGLAIAMQQPTA---RSVIGTP-EFMAPE-LYEEEYNELVDIYSFGMC 269
V ++KI D GL+ + + + RS P ++MA E L++ Y D++SFG+
Sbjct: 183 VAEGR-KMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 270 ILEMVTF-EYPYSECKNPAQIFKKVTSG 296
+ E+VT PY P ++F + +G
Sbjct: 242 LWEIVTLGGNPYPGIP-PERLFNLLKTG 268
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 148 VDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRD 207
V D K V ++TEL G L + K + I + YLH+ ++HRD
Sbjct: 84 VYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG--VVHRD 141
Query: 208 LKCDNIFV---NGNHGEVKIGDLGLAIAMQQPTARSVIGTP----EFMAPELYEEE-YNE 259
LK NI +GN ++I D G A Q ++ TP F+APE+ E + Y+
Sbjct: 142 LKPSNILYVDESGNPESIRICDFGF--AKQLRAENGLLXTPCYTANFVAPEVLERQGYDA 199
Query: 260 LVDIYSFGMCILEMVTFEYPYSECKN--PAQIFKKVTSG---IKPASLAKVNDPQIKGFI 314
DI+S G+ + +T P++ + P +I ++ SG + V+D K +
Sbjct: 200 ACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTA-KDLV 258
Query: 315 EKCL-VPASERLSAKDLLKDPFL 336
K L V +RL+A +L+ P++
Sbjct: 259 SKXLHVDPHQRLTAALVLRHPWI 281
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHG 192
+SL+ N+V+F + + + M E + G L + + + +Q++ G
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVM--EYASGGELFERICNAGRFSEDEARFFFQQLISG 127
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVNGNHG-EVKIGDLGLA---IAMQQPTARSVIGTPEFM 248
+ Y H+ + HRDLK +N ++G+ +KI G + + QP +S +GTP ++
Sbjct: 128 VSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQP--KSTVGTPAYI 183
Query: 249 APE-LYEEEYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 293
APE L ++EY+ ++ D++S G+ + M+ YP+ + + P K +
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 121/268 (45%), Gaps = 42/268 (15%)
Query: 65 ADSDFVEKDPSGRYVRYDEVLGK----GAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ--L 118
D+ + +DP + R + VLGK G F V KA ++ V + + +
Sbjct: 7 VDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS 66
Query: 119 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV- 177
P +L+ L SE ++LK + +V+K Y + D + +I E G+LR + ++ + V
Sbjct: 67 PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG--PLLLIVEYAKYGSLRGFLRESRKVG 124
Query: 178 ------------------DIKVIK-----NWARQILHGLVYLHSHNPPIIHRDLKCDNIF 214
D + + ++A QI G+ YL ++HRDL NI
Sbjct: 125 PGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--LVHRDLAARNIL 182
Query: 215 VNGNHGEVKIGDLGLAIAMQQPTA---RSVIGTP-EFMAPE-LYEEEYNELVDIYSFGMC 269
V ++KI D GL+ + + + RS P ++MA E L++ Y D++SFG+
Sbjct: 183 VAEGR-KMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 270 ILEMVTF-EYPYSECKNPAQIFKKVTSG 296
+ E+VT PY P ++F + +G
Sbjct: 242 LWEIVTLGGNPYPGIP-PERLFNLLKTG 268
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 126/289 (43%), Gaps = 49/289 (16%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDL--QKLYSEVHLLKSLK 136
+R + LG+G F V+ G +RV I + PG + + E ++K L+
Sbjct: 20 LRLEVKLGQGCFGEVW------MGTWNGTTRVAIKTLK--PGTMSPEAFLQEAQVMKKLR 71
Query: 137 DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLV 194
+ +V+ Y ++ + ++ E + G L + K K + + + + A QI G+
Sbjct: 72 HEKLVQLYAV---VSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTP-EFMAPE 251
Y+ N +HRDL+ NI V G + K+ D GLA I + TAR P ++ APE
Sbjct: 129 YVERMN--YVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 252 --LYEEEYNELVDIYSFGMCILEMVT-FEYPYSECKNPAQIFKKVTSGIK-------PAS 301
LY + D++SFG+ + E+ T PY N ++ +V G + P S
Sbjct: 186 AALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCPPECPES 243
Query: 302 LAKV------NDPQIKGFIEKCLVPASERLSAKDLLKDPFLQVENQKEP 344
L + DP+ + P E L A L+D F E Q +P
Sbjct: 244 LHDLMCQCWRKDPEER--------PTFEYLQA--FLEDYFTSTEPQYQP 282
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 121/268 (45%), Gaps = 42/268 (15%)
Query: 65 ADSDFVEKDPSGRYVRYDEVLGK----GAFKTVYKAFDEFAGIEVAWSRVKIDDVLQ--L 118
D+ + +DP + R + VLGK G F V KA ++ V + + +
Sbjct: 7 VDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS 66
Query: 119 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV- 177
P +L+ L SE ++LK + +V+K Y + D + +I E G+LR + ++ + V
Sbjct: 67 PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG--PLLLIVEYAKYGSLRGFLRESRKVG 124
Query: 178 ------------------DIKVIK-----NWARQILHGLVYLHSHNPPIIHRDLKCDNIF 214
D + + ++A QI G+ YL ++HRDL NI
Sbjct: 125 PGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--LVHRDLAARNIL 182
Query: 215 VNGNHGEVKIGDLGLAIAMQQPTA---RSVIGTP-EFMAPE-LYEEEYNELVDIYSFGMC 269
V ++KI D GL+ + + + RS P ++MA E L++ Y D++SFG+
Sbjct: 183 VAEGR-KMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 270 ILEMVTF-EYPYSECKNPAQIFKKVTSG 296
+ E+VT PY P ++F + +G
Sbjct: 242 LWEIVTLGGNPYPGIP-PERLFNLLKTG 268
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 15/218 (6%)
Query: 78 YVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKD 137
YV+ +EV+G G F V + + G + + +K ++ SE ++ +
Sbjct: 15 YVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEH 74
Query: 138 DNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNWARQILHGLVYL 196
N+++ V V ++TE +G L + R + + R I G+ YL
Sbjct: 75 PNIIRLEG--VVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL 132
Query: 197 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ----PTARSVIGTP---EFMA 249
+ +HRDL NI VN N K+ D GL+ +++ PT S +G + A
Sbjct: 133 AEMS--YVHRDLAARNILVNSNL-VCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTA 189
Query: 250 PE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKN 285
PE + ++ D +S+G+ + E+++F E PY + N
Sbjct: 190 PEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN 227
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 125/265 (47%), Gaps = 32/265 (12%)
Query: 83 EVLGKGAFKTVY---KAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDN 139
+VLG GA+ V+ K G A +K ++Q + +E +L+ ++
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 140 -VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 198
+V + ++ + K +++I + G L + + + ++ + +I+ L H
Sbjct: 120 FLVTLHYAFQTETK--LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIV--LALEHL 175
Query: 199 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA---IAMQQPTARSVIGTPEFMAPELY-- 253
H II+RD+K +NI ++ N G V + D GL+ +A + A GT E+MAP++
Sbjct: 176 HKLGIIYRDIKLENILLDSN-GHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRG 234
Query: 254 -EEEYNELVDIYSFGMCILEMVTFEYPYS---ECKNPAQIFKKVTSGIKPASLAKVNDPQ 309
+ +++ VD +S G+ + E++T P++ E + A+I +++ P PQ
Sbjct: 235 GDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY-------PQ 287
Query: 310 IKGFIEKCLVPASERLSAKDLLKDP 334
+ K L+ +RL L+KDP
Sbjct: 288 EMSALAKDLI---QRL----LMKDP 305
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 33/219 (15%)
Query: 85 LGKGAFKTVYKA----FDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL-KDDN 139
LG+GAF V A D+ V VK+ DL L SE+ ++K + K N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK----------------NVDIKVIK 183
++ + D V I E + GNLR+Y + + + K +
Sbjct: 96 IINLLGACTQDGPLYV--IVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 184 NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-----IAMQQPTA 238
+ A Q+ G+ YL S IHRDL N+ V ++ +KI D GLA I + T
Sbjct: 154 SCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VMKIADFGLARDIHHIDYYKKTT 210
Query: 239 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 276
+ ++MAPE L++ Y D++SFG+ + E+ T
Sbjct: 211 NGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 248
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 33/219 (15%)
Query: 85 LGKGAFKTVYKA----FDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL-KDDN 139
LG+GAF V A D+ V VK+ DL L SE+ ++K + K N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK----------------NVDIKVIK 183
++ + D V I E + GNLR+Y + + + K +
Sbjct: 88 IINLLGACTQDGPLYV--IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 184 NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-----IAMQQPTA 238
+ A Q+ G+ YL S IHRDL N+ V ++ +KI D GLA I + T
Sbjct: 146 SCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VMKIADFGLARDIHHIDYYKKTT 202
Query: 239 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 276
+ ++MAPE L++ Y D++SFG+ + E+ T
Sbjct: 203 NGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 240
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 33/219 (15%)
Query: 85 LGKGAFKTVYKA----FDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL-KDDN 139
LG+GAF V A D+ V VK+ DL L SE+ ++K + K N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK----------------NVDIKVIK 183
++ + D V I E + GNLR+Y + + + K +
Sbjct: 85 IINLLGACTQDGPLYV--IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 184 NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-----IAMQQPTA 238
+ A Q+ G+ YL S IHRDL N+ V ++ +KI D GLA I + T
Sbjct: 143 SCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VMKIADFGLARDIHHIDYYKKTT 199
Query: 239 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 276
+ ++MAPE L++ Y D++SFG+ + E+ T
Sbjct: 200 NGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 237
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 33/219 (15%)
Query: 85 LGKGAFKTVYKA----FDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL-KDDN 139
LG+GAF V A D+ V VK+ DL L SE+ ++K + K N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK----------------NVDIKVIK 183
++ + D V I E + GNLR+Y + + + K +
Sbjct: 96 IINLLGACTQDGPLYV--IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 184 NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-----IAMQQPTA 238
+ A Q+ G+ YL S IHRDL N+ V ++ +KI D GLA I + T
Sbjct: 154 SCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VMKIADFGLARDIHHIDYYKKTT 210
Query: 239 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 276
+ ++MAPE L++ Y D++SFG+ + E+ T
Sbjct: 211 NGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 248
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 33/219 (15%)
Query: 85 LGKGAFKTVYKA----FDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL-KDDN 139
LG+GAF V A D+ V VK+ DL L SE+ ++K + K N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK----------------NVDIKVIK 183
++ + D V I E + GNLR+Y + + + K +
Sbjct: 81 IINLLGACTQDGPLYV--IVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 184 NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-----IAMQQPTA 238
+ A Q+ G+ YL S IHRDL N+ V ++ +KI D GLA I + T
Sbjct: 139 SCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VMKIADFGLARDIHHIDYYKKTT 195
Query: 239 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 276
+ ++MAPE L++ Y D++SFG+ + E+ T
Sbjct: 196 NGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 233
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 20/221 (9%)
Query: 81 YDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNV 140
+ +VLG GAF V A D+ VA +K L G + +E+ +L +K N+
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQKLVA---IKCIAKKALEGKEGSMENEIAVLHKIKHPNI 78
Query: 141 VKFYKSWVDDKKKT---VNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLH 197
V +DD ++ + +I +L + G L + + Q+L + YLH
Sbjct: 79 VA-----LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH 133
Query: 198 SHNPPIIHRDLKCDNIFVNG--NHGEVKIGDLGLAIAMQQPTA--RSVIGTPEFMAPE-L 252
+ I+HRDLK +N+ ++ I D GL+ M+ P + + GTP ++APE L
Sbjct: 134 --DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMEDPGSVLSTACGTPGYVAPEVL 190
Query: 253 YEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 293
++ Y++ VD +S G+ I ++ YP +N A++F+++
Sbjct: 191 AQKPYSKAVDCWSIGV-IAYILLCGYPPFYDENDAKLFEQI 230
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 33/219 (15%)
Query: 85 LGKGAFKTVYKA----FDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL-KDDN 139
LG+GAF V A D+ V VK+ DL L SE+ ++K + K N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK----------------NVDIKVIK 183
++ + D V I E + GNLR+Y + + + K +
Sbjct: 89 IINLLGACTQDGPLYV--IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 184 NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-----IAMQQPTA 238
+ A Q+ G+ YL S IHRDL N+ V ++ +KI D GLA I + T
Sbjct: 147 SCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VMKIADFGLARDIHHIDYYKKTT 203
Query: 239 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 276
+ ++MAPE L++ Y D++SFG+ + E+ T
Sbjct: 204 NGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 241
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 14/218 (6%)
Query: 81 YDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNV 140
+ +VLG GAF V A D+ VA +K L G + +E+ +L +K N+
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQKLVA---IKCIAKEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 141 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
V + + + +I +L + G L + + Q+L + YLH +
Sbjct: 79 VALDDIY--ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH--D 134
Query: 201 PPIIHRDLKCDNIFVNG--NHGEVKIGDLGLAIAMQQPTA--RSVIGTPEFMAPE-LYEE 255
I+HRDLK +N+ ++ I D GL+ M+ P + + GTP ++APE L ++
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMEDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 256 EYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 293
Y++ VD +S G+ I ++ YP +N A++F+++
Sbjct: 194 PYSKAVDCWSIGV-IAYILLCGYPPFYDENDAKLFEQI 230
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 6/98 (6%)
Query: 187 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNH--GEVKIGDLGLAIAMQQPTA-RSVIG 243
+QIL G+ YLH +N I+H DLK NI ++ + G++KI D G++ + R ++G
Sbjct: 138 KQILEGVYYLHQNN--IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMG 195
Query: 244 TPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPY 280
TPE++APE+ + D+++ G+ ++T P+
Sbjct: 196 TPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPF 233
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGD------LQKLYSEVHLL 132
+R +VLG G F TV+K G +KI +++ D Q + + +
Sbjct: 33 LRKLKVLGSGVFGTVHKGVWIPEG-----ESIKIPVCIKVIEDKSGRQSFQAVTDHMLAI 87
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKN-VDIKVIKNWARQILH 191
SL ++V+ ++ ++T+ G+L + ++H+ + +++ NW QI
Sbjct: 88 GSLDHAHIVRLLGLC---PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAK 144
Query: 192 GLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVI----GTP-E 246
G+ YL H ++HR+L N+ + + +V++ D G+A + P + ++ TP +
Sbjct: 145 GMYYLEEHG--MVHRNLAARNVLLK-SPSQVQVADFGVA-DLLPPDDKQLLYSEAKTPIK 200
Query: 247 FMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYS 281
+MA E ++ +Y D++S+G+ + E++TF PY+
Sbjct: 201 WMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYA 237
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA----MQQPTARSV 241
A+ +G+ +LH ++ IHRD+K NI ++ KI D GLA A Q +
Sbjct: 139 AQGAANGINFLHENHH--IHRDIKSANILLDEAF-TAKISDFGLARASEKFAQTVMXSRI 195
Query: 242 IGTPEFMAPELYEEEYNELVDIYSFGMCILEMVT 275
+GT +MAPE E DIYSFG+ +LE++T
Sbjct: 196 VGTTAYMAPEALRGEITPKSDIYSFGVVLLEIIT 229
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 20/221 (9%)
Query: 81 YDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNV 140
+ +VLG GAF V A D+ VA +K L G + +E+ +L +K N+
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQKLVA---IKCIAKEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 141 VKFYKSWVDDKKKT---VNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLH 197
V +DD ++ + +I +L + G L + + Q+L + YLH
Sbjct: 79 VA-----LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH 133
Query: 198 SHNPPIIHRDLKCDNIFVNG--NHGEVKIGDLGLAIAMQQPTA--RSVIGTPEFMAPE-L 252
+ I+HRDLK +N+ ++ I D GL+ M+ P + + GTP ++APE L
Sbjct: 134 --DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMEDPGSVLSTACGTPGYVAPEVL 190
Query: 253 YEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 293
++ Y++ VD +S G+ I ++ YP +N A++F+++
Sbjct: 191 AQKPYSKAVDCWSIGV-IAYILLCGYPPFYDENDAKLFEQI 230
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 103/249 (41%), Gaps = 16/249 (6%)
Query: 59 TAEPPDADSDFVEKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQL 118
T E P K+ + D+V+G G F V + + +K V
Sbjct: 27 TFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 119 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVD 178
+ E ++ N+++ V K K V ++TE +G+L + +KH +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRL--EGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQ 143
Query: 179 IKVIK--NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP 236
VI+ R I G+ YL +HRDL NI +N N K+ D GLA ++
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNL-VCKVSDFGLARVLEDD 200
Query: 237 -----TARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 289
T R + +PE + ++ D++S+G+ + E++++ E PY E N +
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDV 259
Query: 290 FKKVTSGIK 298
K V G +
Sbjct: 260 IKAVDEGYR 268
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 20/221 (9%)
Query: 81 YDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNV 140
+ +VLG GAF V A D+ VA +K L G + +E+ +L +K N+
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQKLVA---IKCIAKEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 141 VKFYKSWVDDKKKT---VNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLH 197
V +DD ++ + +I +L + G L + + Q+L + YLH
Sbjct: 79 VA-----LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH 133
Query: 198 SHNPPIIHRDLKCDNIFVNG--NHGEVKIGDLGLAIAMQQPTA--RSVIGTPEFMAPE-L 252
+ I+HRDLK +N+ ++ I D GL+ M+ P + + GTP ++APE L
Sbjct: 134 --DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMEDPGSVLSTACGTPGYVAPEVL 190
Query: 253 YEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 293
++ Y++ VD +S G+ I ++ YP +N A++F+++
Sbjct: 191 AQKPYSKAVDCWSIGV-IAYILLCGYPPFYDENDAKLFEQI 230
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 12/169 (7%)
Query: 123 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKV 181
+K E ++ ++VK ++ V +I EL T G LR + + K ++D+
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKFSLDLAS 112
Query: 182 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV 241
+ +A Q+ L YL S +HRD+ N+ V+ N VK+GD GL+ M+ T
Sbjct: 113 LILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTXXKA 169
Query: 242 IGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEY-PYSECKN 285
++MAPE + + D++ FG+C+ E++ P+ KN
Sbjct: 170 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 218
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 92/214 (42%), Gaps = 36/214 (16%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLK-DDNVVKF 143
LGKGA+ V+K+ D G VA KI D Q D Q+ + E+ +L L +N+V
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVK--KIFDAFQNSTDAQRTFREIMILTELSGHENIVNL 74
Query: 144 YKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNW-ARQILHGLVYLHSHNPP 202
D + V ++ + + R N+ V K + Q++ + YLHS
Sbjct: 75 LNVLRADNDRDVYLVFDYMETDLHAVIR---ANILEPVHKQYVVYQLIKVIKYLHSGG-- 129
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM-----------------------QQPTAR 239
++HRD+K NI +N VK+ D GL+ + QP
Sbjct: 130 LLHRDMKPSNILLNA-ECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILT 188
Query: 240 SVIGTPEFMAPE--LYEEEYNELVDIYSFGMCIL 271
+ T + APE L +Y + +D++S G CIL
Sbjct: 189 DYVATRWYRAPEILLGSTKYTKGIDMWSLG-CIL 221
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA----MQQPTARSV 241
A+ +G+ +LH ++ IHRD+K NI ++ KI D GLA A Q +
Sbjct: 139 AQGAANGINFLHENHH--IHRDIKSANILLDEAF-TAKISDFGLARASEKFAQTVMXXRI 195
Query: 242 IGTPEFMAPELYEEEYNELVDIYSFGMCILEMVT 275
+GT +MAPE E DIYSFG+ +LE++T
Sbjct: 196 VGTTAYMAPEALRGEITPKSDIYSFGVVLLEIIT 229
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 105/216 (48%), Gaps = 24/216 (11%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGD------LQKLYSEVHLL 132
+R +VLG G F TV+K G +KI +++ D Q + + +
Sbjct: 15 LRKLKVLGSGVFGTVHKGVWIPEG-----ESIKIPVCIKVIEDKSGRQSFQAVTDHMLAI 69
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKN-VDIKVIKNWARQILH 191
SL ++V+ ++ ++T+ G+L + ++H+ + +++ NW QI
Sbjct: 70 GSLDHAHIVRLLGLC---PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAK 126
Query: 192 GLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM---QQPTARSVIGTP-EF 247
G+ YL H ++HR+L N+ + + +V++ D G+A + + S TP ++
Sbjct: 127 GMYYLEEHG--MVHRNLAARNVLLK-SPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKW 183
Query: 248 MAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYS 281
MA E ++ +Y D++S+G+ + E++TF PY+
Sbjct: 184 MALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYA 219
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 33/219 (15%)
Query: 85 LGKGAFKTVYKA----FDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL-KDDN 139
LG+GAF V A D+ V VK+ DL L SE+ ++K + K N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK----------------NVDIKVIK 183
++ + D V I E + GNLR+Y + + + K +
Sbjct: 96 IINLLGACTQDGPLYV--IVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 184 NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-----IAMQQPTA 238
+ A Q+ G+ YL S IHRDL N+ V ++ +KI D GLA I + T
Sbjct: 154 SCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDN-VMKIADFGLARDIHHIDYYKKTT 210
Query: 239 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 276
+ ++MAPE L++ Y D++SFG+ + E+ T
Sbjct: 211 NGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 248
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 41/241 (17%)
Query: 85 LGKGAFKTVYKAFDEFAGIE-------VAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKD 137
LG+GAF V+ A E + VA +K D L D Q+ E LL +L+
Sbjct: 23 LGEGAFGKVFLA--ECYNLSPTKDKMLVAVKALK-DPTLAARKDFQR---EAELLTNLQH 76
Query: 138 DNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKH----------------KNVDIKV 181
+++VKFY D + M+ E G+L ++ + H + +
Sbjct: 77 EHIVKFYGVCGDG--DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 134
Query: 182 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV 241
+ + A QI G+VYL S + +HRDL N V N VKIGD G++ + V
Sbjct: 135 MLHIASQIASGMVYLASQH--FVHRDLATRNCLVGANL-LVKIGDFGMSRDVYSTDYYRV 191
Query: 242 IGTP----EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQIFKKVTS 295
G +M PE + ++ D++SFG+ + E+ T+ + P+ + N ++ + +T
Sbjct: 192 GGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN-TEVIECITQ 250
Query: 296 G 296
G
Sbjct: 251 G 251
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 126/282 (44%), Gaps = 33/282 (11%)
Query: 22 RLQTSPFHPQFLKTKNIKPIIA-----VFFLVAVWFLS-------GMLGTAEPPDADSD- 68
+++ +P P+ + ++ + A +F ++FL GM G D D
Sbjct: 25 KVKATPMTPEQAMKQYMQKLTAFEHHEIFSYPEIYFLGLNAKKRQGMTGGPNNGGYDDDQ 84
Query: 69 --FVEKDPSGRYVRYD--EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQK 124
+V+ RY+ +V+GKG+F V KA+D VA V+ + +
Sbjct: 85 GSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEI 144
Query: 125 LYSEVHLLKSLKDD--NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK--NVDIK 180
E HL K KD+ NV+ +++ + + M EL S NL + KK+K +
Sbjct: 145 RILE-HLRKQDKDNTMNVIHMLENFTF--RNHICMTFELL-SMNLYELIKKNKFQGFSLP 200
Query: 181 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFV--NGNHGEVKIGDLGLAIAMQQPTA 238
+++ +A IL L LH + IIH DLK +NI + G G +K+ D G + Q
Sbjct: 201 LVRKFAHSILQCLDALHKNR--IIHCDLKPENILLKQQGRSG-IKVIDFGSSCYEHQ-RV 256
Query: 239 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 279
+ I + + APE + Y +D++S G CIL + YP
Sbjct: 257 YTXIQSRFYRAPEVILGARYGMPIDMWSLG-CILAELLTGYP 297
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA----MQQPTARSV 241
A+ +G+ +LH ++ IHRD+K NI ++ KI D GLA A Q +
Sbjct: 133 AQGAANGINFLHENHH--IHRDIKSANILLDEAF-TAKISDFGLARASEKFAQXVMXXRI 189
Query: 242 IGTPEFMAPELYEEEYNELVDIYSFGMCILEMVT 275
+GT +MAPE E DIYSFG+ +LE++T
Sbjct: 190 VGTTAYMAPEALRGEITPKSDIYSFGVVLLEIIT 223
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 84 VLGKGAFKTVY---KAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNV 140
VLGKG + V+ K G A +K +++ D +E ++L+ +K +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 141 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
V ++ K + +I E + G L ++ + +I L +LH
Sbjct: 84 VDLIYAFQTGGK--LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPE-LYEEEY 257
II+RDLK +NI +N + G VK+ D GL + GT E+MAPE L +
Sbjct: 142 --IIYRDLKPENIMLN-HQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGH 198
Query: 258 NELVDIYSFGMCILEMVTFEYPYS 281
N VD +S G + +M+T P++
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPFT 222
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 126/282 (44%), Gaps = 33/282 (11%)
Query: 22 RLQTSPFHPQFLKTKNIKPIIA-----VFFLVAVWFLS-------GMLGTAEPPDADSD- 68
+++ +P P+ + ++ + A +F ++FL GM G D D
Sbjct: 25 KVKATPMTPEQAMKQYMQKLTAFEHHEIFSYPEIYFLGLNAKKRQGMTGGPNNGGYDDDQ 84
Query: 69 --FVEKDPSGRYVRYD--EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQK 124
+V+ RY+ +V+GKG+F V KA+D VA V+ + +
Sbjct: 85 GSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEI 144
Query: 125 LYSEVHLLKSLKDD--NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK--NVDIK 180
E HL K KD+ NV+ +++ + + M EL S NL + KK+K +
Sbjct: 145 RILE-HLRKQDKDNTMNVIHMLENFTF--RNHICMTFELL-SMNLYELIKKNKFQGFSLP 200
Query: 181 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFV--NGNHGEVKIGDLGLAIAMQQPTA 238
+++ +A IL L LH + IIH DLK +NI + G G +K+ D G + Q
Sbjct: 201 LVRKFAHSILQCLDALHKNR--IIHCDLKPENILLKQQGRSG-IKVIDFGSSCYEHQ-RV 256
Query: 239 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 279
+ I + + APE + Y +D++S G CIL + YP
Sbjct: 257 YTXIQSRFYRAPEVILGARYGMPIDMWSLG-CILAELLTGYP 297
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Query: 197 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM--QQPTARSVIGTPEFMAPELYE 254
H H+ II+RDLK +NI ++ G +K+ D GL+ + A S GT E+MAPE+
Sbjct: 142 HLHSLGIIYRDLKPENILLD-EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 200
Query: 255 EE-YNELVDIYSFGMCILEMVTFEYPY 280
+ + D +SFG+ + EM+T P+
Sbjct: 201 RRGHTQSADWWSFGVLMFEMLTGTLPF 227
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Query: 197 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM--QQPTARSVIGTPEFMAPELYE 254
H H+ II+RDLK +NI ++ G +K+ D GL+ + A S GT E+MAPE+
Sbjct: 141 HLHSLGIIYRDLKPENILLD-EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 199
Query: 255 EE-YNELVDIYSFGMCILEMVTFEYPY 280
+ + D +SFG+ + EM+T P+
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 15/217 (6%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDD 138
V+ ++V+G G F V + G + +K + SE ++
Sbjct: 9 VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHP 68
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNWARQILHGLVYLH 197
NV+ V K V +ITE +G+L + R+ + + R I G+ YL
Sbjct: 69 NVIHL--EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA 126
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ----QPTARSVIGTP---EFMAP 250
N +HR L NI VN N K+ D GL+ ++ PT S +G + AP
Sbjct: 127 DMN--YVHRALAARNILVNSNL-VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 183
Query: 251 ELYE-EEYNELVDIYSFGMCILEMVTF-EYPYSECKN 285
E + ++ D++S+G+ + E++++ E PY + N
Sbjct: 184 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN 220
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 103/249 (41%), Gaps = 16/249 (6%)
Query: 59 TAEPPDADSDFVEKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQL 118
T E P K+ + D+V+G G F V + + +K V
Sbjct: 27 TFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 119 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVD 178
+ E ++ N+++ V K K V ++TE +G+L + +KH +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEG--VVTKSKPVMIVTEXMENGSLDSFLRKH-DAQ 143
Query: 179 IKVIK--NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP 236
VI+ R I G+ YL +HRDL NI +N N K+ D GL+ ++
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGA--VHRDLAARNILINSNL-VCKVSDFGLSRVLEDD 200
Query: 237 -----TARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 289
T R + +PE + ++ D++S+G+ + E++++ E PY E N +
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDV 259
Query: 290 FKKVTSGIK 298
K V G +
Sbjct: 260 IKAVDEGYR 268
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 18/208 (8%)
Query: 82 DEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVV 141
+ + G+G F TV ++ G+ VA I V+Q P + + L L N+V
Sbjct: 28 ERMAGQGTFGTVQLGKEKSTGMSVA-----IKKVIQDPRFRNRELQIMQDLAVLHHPNIV 82
Query: 142 K----FYKSWVDDKKKT-VNMITELFTSG---NLRQYRKKHKNVDIKVIKNWARQILHGL 193
+ FY D++ +N++ E R Y ++ +IK + Q++ +
Sbjct: 83 QLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSI 142
Query: 194 VYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPE 251
LH + + HRD+K N+ VN G +K+ D G A ++ +P + I + + APE
Sbjct: 143 GCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNV-AYICSRYYRAPE 201
Query: 252 LY--EEEYNELVDIYSFGMCILEMVTFE 277
L + Y VDI+S G EM+ E
Sbjct: 202 LIFGNQHYTTAVDIWSVGCIFAEMMLGE 229
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 103/249 (41%), Gaps = 16/249 (6%)
Query: 59 TAEPPDADSDFVEKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQL 118
T E P K+ + D+V+G G F V + + +K V
Sbjct: 27 TFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 119 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVD 178
+ E ++ N+++ V K K V ++TE +G+L + +KH +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRL--EGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQ 143
Query: 179 IKVIK--NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP 236
VI+ R I G+ YL +HRDL NI +N N K+ D GL+ ++
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMG--FVHRDLAARNILINSNL-VCKVSDFGLSRVLEDD 200
Query: 237 -----TARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 289
T R + +PE + ++ D++S+G+ + E++++ E PY E N +
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDV 259
Query: 290 FKKVTSGIK 298
K V G +
Sbjct: 260 IKAVDEGYR 268
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 91/200 (45%), Gaps = 22/200 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA V A+D VA K+ Q ++ Y E+ L+K + N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ K + V ++ EL NL Q + +D + + Q+L G+ +LHS
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE-----FMAPE-LYE 254
IIHRDLK NI V + +KI D GLA + S + TPE + APE +
Sbjct: 147 --IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPEVVTRYYRAPEVILG 199
Query: 255 EEYNELVDIYSFGMCILEMV 274
Y E VDI+S G + EM+
Sbjct: 200 MGYKENVDIWSVGCIMGEMI 219
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 20/218 (9%)
Query: 74 PSGRYVRYDEVLGKGAFKTVYKAF---DEFAGIEVAWSRV-KIDDVLQLPGDLQKLYSEV 129
PS V ++EV+G+G F VY ++ I A + +I D+ G++ + +E
Sbjct: 26 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI----GEVSQFLTEG 81
Query: 130 HLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNWARQ 188
++K NV+ + + + ++ G+LR + R + N +K + + Q
Sbjct: 82 IIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 140
Query: 189 ILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP--- 245
+ G+ YL S +HRDL N ++ VK+ D GLA M SV
Sbjct: 141 VAKGMKYLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEXXSVHNKTGAK 197
Query: 246 ---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 279
++MA E L +++ D++SFG+ + E++T P
Sbjct: 198 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Query: 197 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM--QQPTARSVIGTPEFMAPELYE 254
H H+ II+RDLK +NI ++ G +K+ D GL+ + A S GT E+MAPE+
Sbjct: 141 HLHSLGIIYRDLKPENILLD-EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 199
Query: 255 EE-YNELVDIYSFGMCILEMVTFEYPY 280
+ + D +SFG+ + EM+T P+
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 123 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKV 181
+K E ++ ++VK ++ V +I EL T G LR + + K ++D+
Sbjct: 84 EKFLQEALTMRQFDHPHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKYSLDLAS 140
Query: 182 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT---A 238
+ +A Q+ L YL S +HRD+ N+ V+ N VK+GD GL+ M+ T A
Sbjct: 141 LILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKA 197
Query: 239 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEY-PYSECKN 285
++MAPE + + D++ FG+C+ E++ P+ KN
Sbjct: 198 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 246
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 84/167 (50%), Gaps = 12/167 (7%)
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHG 192
+SL+ N+V+F + + + M E + G L + + + +Q++ G
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVM--EYASGGELFERICNAGRFSEDEARFFFQQLISG 127
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVNGNHG-EVKIGDLGLA---IAMQQPTARSVIGTPEFM 248
+ Y H+ + HRDLK +N ++G+ +KI G + + QP + +GTP ++
Sbjct: 128 VSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQP--KDTVGTPAYI 183
Query: 249 APE-LYEEEYN-ELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKV 293
APE L ++EY+ ++ D++S G+ + M+ YP+ + + P K +
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 12/169 (7%)
Query: 123 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKV 181
+K E ++ ++VK ++ V +I EL T G LR + + K ++D+
Sbjct: 61 EKFLQEALTMRQFDHPHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKYSLDLAS 117
Query: 182 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV 241
+ +A Q+ L YL S +HRD+ N+ V+ N VK+GD GL+ M+ T
Sbjct: 118 LILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKA 174
Query: 242 IGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEY-PYSECKN 285
++MAPE + + D++ FG+C+ E++ P+ KN
Sbjct: 175 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 223
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 12/169 (7%)
Query: 123 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKV 181
+K E ++ ++VK ++ V +I EL T G LR + + K ++D+
Sbjct: 59 EKFLQEALTMRQFDHPHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKYSLDLAS 115
Query: 182 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV 241
+ +A Q+ L YL S +HRD+ N+ V+ N VK+GD GL+ M+ T
Sbjct: 116 LILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKA 172
Query: 242 IGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEY-PYSECKN 285
++MAPE + + D++ FG+C+ E++ P+ KN
Sbjct: 173 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 221
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 123 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKV 181
+K E ++ ++VK ++ V +I EL T G LR + + K ++D+
Sbjct: 58 EKFLQEALTMRQFDHPHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKYSLDLAS 114
Query: 182 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT---A 238
+ +A Q+ L YL S +HRD+ N+ V+ N VK+GD GL+ M+ T A
Sbjct: 115 LILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKA 171
Query: 239 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEY-PYSECKN 285
++MAPE + + D++ FG+C+ E++ P+ KN
Sbjct: 172 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 220
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 103/249 (41%), Gaps = 16/249 (6%)
Query: 59 TAEPPDADSDFVEKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQL 118
T E P K+ + D+V+G G F V + + +K V
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 119 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVD 178
+ E ++ N+++ V K K V ++TE +G+L + +KH +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRL--EGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQ 143
Query: 179 IKVIK--NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP 236
VI+ R I G+ YL +HRDL NI +N N K+ D GL+ ++
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNL-VCKVSDFGLSRVLEDD 200
Query: 237 -----TARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 289
T R + +PE + ++ D++S+G+ + E++++ E PY E N +
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDV 259
Query: 290 FKKVTSGIK 298
K V G +
Sbjct: 260 IKAVDEGYR 268
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 103/249 (41%), Gaps = 16/249 (6%)
Query: 59 TAEPPDADSDFVEKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQL 118
T E P K+ + D+V+G G F V + + +K V
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 119 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVD 178
+ E ++ N+++ V K K V ++TE +G+L + +KH +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRL--EGVVTKSKPVMIVTEXMENGSLDSFLRKH-DAQ 143
Query: 179 IKVIK--NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP 236
VI+ R I G+ YL +HRDL NI +N N K+ D GL+ ++
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNL-VCKVSDFGLSRVLEDD 200
Query: 237 -----TARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 289
T R + +PE + ++ D++S+G+ + E++++ E PY E N +
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDV 259
Query: 290 FKKVTSGIK 298
K V G +
Sbjct: 260 IKAVDEGYR 268
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 123 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKV 181
+K E ++ ++VK ++ V +I EL T G LR + + K ++D+
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKYSLDLAS 112
Query: 182 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT---A 238
+ +A Q+ L YL S +HRD+ N+ V+ N VK+GD GL+ M+ T A
Sbjct: 113 LILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKA 169
Query: 239 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEY-PYSECKN 285
++MAPE + + D++ FG+C+ E++ P+ KN
Sbjct: 170 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 218
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 103/249 (41%), Gaps = 16/249 (6%)
Query: 59 TAEPPDADSDFVEKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQL 118
T E P K+ + D+V+G G F V + + +K V
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 119 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVD 178
+ E ++ N+++ V K K V ++TE +G+L + +KH +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRL--EGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQ 143
Query: 179 IKVIK--NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP 236
VI+ R I G+ YL +HRDL NI +N N K+ D GL+ ++
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNL-VCKVSDFGLSRVLEDD 200
Query: 237 -----TARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 289
T R + +PE + ++ D++S+G+ + E++++ E PY E N +
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDV 259
Query: 290 FKKVTSGIK 298
K V G +
Sbjct: 260 IKAVDEGYR 268
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 123 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKV 181
+K E ++ ++VK ++ V +I EL T G LR + + K ++D+
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKYSLDLAS 112
Query: 182 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT---A 238
+ +A Q+ L YL S +HRD+ N+ V+ N VK+GD GL+ M+ T A
Sbjct: 113 LILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKA 169
Query: 239 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEY-PYSECKN 285
++MAPE + + D++ FG+C+ E++ P+ KN
Sbjct: 170 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 218
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 12/169 (7%)
Query: 123 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKV 181
+K E ++ ++VK ++ V +I EL T G LR + + K ++D+
Sbjct: 53 EKFLQEALTMRQFDHPHIVKLIGVITEN---PVWIIMELCTLGELRSFLQVRKYSLDLAS 109
Query: 182 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV 241
+ +A Q+ L YL S +HRD+ N+ V+ N VK+GD GL+ M+ T
Sbjct: 110 LILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKA 166
Query: 242 IGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEY-PYSECKN 285
++MAPE + + D++ FG+C+ E++ P+ KN
Sbjct: 167 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 215
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 109/233 (46%), Gaps = 29/233 (12%)
Query: 63 PDADSDFVEKDPSGRYVRYDEV--LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPG 120
P D VE +Y+++ +G+G F V+KA G +VA +V +++ + G
Sbjct: 2 PAKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN--EKEG 59
Query: 121 DLQKLYSEVHLLKSLKDDNVVKFYK------SWVDDKKKTVNMITELFTSGNLRQYRKKH 174
E+ +L+ LK +NVV + S + K ++ ++ + F +L
Sbjct: 60 FPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFD-FCEHDLAGLLS-- 116
Query: 175 KNVDIKV----IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA 230
NV +K IK + +L+GL Y+H + I+HRD+K N+ + + G +K+ D GLA
Sbjct: 117 -NVLVKFTLSEIKRVMQMLLNGLYYIHRNK--ILHRDMKAANVLITRD-GVLKLADFGLA 172
Query: 231 IAM-----QQPTA-RSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMVT 275
A QP + + T + PEL E +Y +D++ G + EM T
Sbjct: 173 RAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 103/249 (41%), Gaps = 16/249 (6%)
Query: 59 TAEPPDADSDFVEKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQL 118
T E P K+ + D+V+G G F V + + +K V
Sbjct: 27 TFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 119 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVD 178
+ E ++ N+++ V K K V ++TE +G+L + +KH +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRL--EGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQ 143
Query: 179 IKVIK--NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP 236
VI+ R I G+ YL +HRDL NI +N N K+ D GL+ ++
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNL-VCKVSDFGLSRVLEDD 200
Query: 237 -----TARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 289
T R + +PE + ++ D++S+G+ + E++++ E PY E N +
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDV 259
Query: 290 FKKVTSGIK 298
K V G +
Sbjct: 260 IKAVDEGYR 268
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 11/204 (5%)
Query: 84 VLGKGAFKTVY---KAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNV 140
VLGKG + V+ K G A +K +++ D +E ++L+ +K +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 141 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
V ++ K + +I E + G L ++ + +I L +LH
Sbjct: 84 VDLIYAFQTGGK--LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPE-LYEEEY 257
II+RDLK +NI +N + G VK+ D GL GT E+MAPE L +
Sbjct: 142 --IIYRDLKPENIMLN-HQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGH 198
Query: 258 NELVDIYSFGMCILEMVTFEYPYS 281
N VD +S G + +M+T P++
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPFT 222
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 103/249 (41%), Gaps = 16/249 (6%)
Query: 59 TAEPPDADSDFVEKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQL 118
T E P K+ + D+V+G G F V + + +K V
Sbjct: 25 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 84
Query: 119 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVD 178
+ E ++ N+++ V K K V ++TE +G+L + +KH +
Sbjct: 85 EKQRRDFLGEASIMGQFDHPNIIRL--EGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQ 141
Query: 179 IKVIK--NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP 236
VI+ R I G+ YL +HRDL NI +N N K+ D GL+ ++
Sbjct: 142 FTVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNL-VCKVSDFGLSRVLEDD 198
Query: 237 -----TARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 289
T R + +PE + ++ D++S+G+ + E++++ E PY E N +
Sbjct: 199 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDV 257
Query: 290 FKKVTSGIK 298
K V G +
Sbjct: 258 IKAVDEGYR 266
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 103/249 (41%), Gaps = 16/249 (6%)
Query: 59 TAEPPDADSDFVEKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQL 118
T E P K+ + D+V+G G F V + + +K V
Sbjct: 27 TFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 119 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVD 178
+ E ++ N+++ V K K V ++TE +G+L + +KH +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRL--EGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQ 143
Query: 179 IKVIK--NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP 236
VI+ R I G+ YL +HRDL NI +N N K+ D GL+ ++
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNL-VCKVSDFGLSRVLEDD 200
Query: 237 -----TARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 289
T R + +PE + ++ D++S+G+ + E++++ E PY E N +
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDV 259
Query: 290 FKKVTSGIK 298
K V G +
Sbjct: 260 IKAVDEGYR 268
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 102/249 (40%), Gaps = 16/249 (6%)
Query: 59 TAEPPDADSDFVEKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQL 118
T E P K+ + D+V+G G F V + + +K V
Sbjct: 27 TFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 119 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVD 178
+ E ++ N+++ V K K V ++TE +G+L + +KH +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRL--EGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQ 143
Query: 179 IKVIK--NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP 236
VI+ R I G+ YL +HRDL NI +N N K+ D GL ++
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNL-VCKVSDFGLGRVLEDD 200
Query: 237 -----TARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 289
T R + +PE + ++ D++S+G+ + E++++ E PY E N +
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDV 259
Query: 290 FKKVTSGIK 298
K V G +
Sbjct: 260 IKAVDEGYR 268
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 123/295 (41%), Gaps = 67/295 (22%)
Query: 83 EVLGKGAFKTVYKA--FDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKS--LKDD 138
E+ +G F V+KA ++F +++ LQ D Q SE + + +K +
Sbjct: 21 EIKARGRFGCVWKAQLMNDFVAVKIF--------PLQ---DKQSWQSEREIFSTPGMKHE 69
Query: 139 NVVKFYKSWVDDKKKTVNMITELFT------SGNLRQYRKKHKNVDIKVIKNWARQILHG 192
N+++F + +K+ N+ EL+ G+L Y K + + + + A + G
Sbjct: 70 NLLQF----IAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNI-ITWNELCHVAETMSRG 124
Query: 193 LVYLH---------SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ--QPTA--R 239
L YLH H P I HRD K N+ + + V + D GLA+ + +P
Sbjct: 125 LSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAV-LADFGLAVRFEPGKPPGDTH 183
Query: 240 SVIGTPEFMAPELYEEEYN------ELVDIYSFGMCILEMVT---------------FE- 277
+GT +MAPE+ E N +D+Y+ G+ + E+V+ FE
Sbjct: 184 GQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEE 243
Query: 278 ----YPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL-VPASERLSA 327
+P E + KK+ IK L Q+ IE+C A RLSA
Sbjct: 244 EIGQHPSLEELQEVVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWDHDAEARLSA 298
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 111/237 (46%), Gaps = 34/237 (14%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGD-LQKLYSEVHLLKSLKDDNVV 141
E++GKG F VY + G EVA +++ D+ + D L+ EV + + +NVV
Sbjct: 39 ELIGKGRFGQVYHG--RWHG-EVA---IRLIDIERDNEDQLKAFKREVMAYRQTRHENVV 92
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV-DIKVIKNWARQILHGLVYLHSHN 200
F + + + +IT L L + K V D+ + A++I+ G+ YLH+
Sbjct: 93 LFMGACMSPPH--LAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG 150
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLG-------LAIAMQQPTARSVIGTPEFMAPELY 253
I+H+DLK N+F ++G+V I D G L ++ R G +APE+
Sbjct: 151 --ILHKDLKSKNVFY--DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEII 206
Query: 254 EE----------EYNELVDIYSFGMCILEMVTFEYPYSECKNPAQ-IFKKVTSGIKP 299
+ +++ D+++ G E+ E+P+ PA+ I ++ +G+KP
Sbjct: 207 RQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFK--TQPAEAIIWQMGTGMKP 261
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 20/218 (9%)
Query: 74 PSGRYVRYDEVLGKGAFKTVYKAF---DEFAGIEVAWSRV-KIDDVLQLPGDLQKLYSEV 129
PS V ++EV+G+G F VY ++ I A + +I D+ G++ + +E
Sbjct: 45 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI----GEVSQFLTEG 100
Query: 130 HLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNWARQ 188
++K NV+ + + + ++ G+LR + R + N +K + + Q
Sbjct: 101 IIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 159
Query: 189 ILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP--- 245
+ G+ YL S +HRDL N ++ VK+ D GLA M SV
Sbjct: 160 VAKGMKYLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNKTGAK 216
Query: 246 ---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 279
++MA E L +++ D++SFG+ + E++T P
Sbjct: 217 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 109/233 (46%), Gaps = 29/233 (12%)
Query: 63 PDADSDFVEKDPSGRYVRYDEV--LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPG 120
P D VE +Y+++ +G+G F V+KA G +VA +V +++ + G
Sbjct: 2 PAKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN--EKEG 59
Query: 121 DLQKLYSEVHLLKSLKDDNVVKFYK------SWVDDKKKTVNMITELFTSGNLRQYRKKH 174
E+ +L+ LK +NVV + S + K ++ ++ + F +L
Sbjct: 60 FPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFD-FCEHDLAGLLS-- 116
Query: 175 KNVDIKV----IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA 230
NV +K IK + +L+GL Y+H + I+HRD+K N+ + + G +K+ D GLA
Sbjct: 117 -NVLVKFTLSEIKRVMQMLLNGLYYIHRNK--ILHRDMKAANVLITRD-GVLKLADFGLA 172
Query: 231 IAM-----QQPTA-RSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMVT 275
A QP + + T + PEL E +Y +D++ G + EM T
Sbjct: 173 RAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 12/169 (7%)
Query: 123 QKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-NVDIKV 181
+K E ++ ++VK ++ V +I EL T G LR + + K ++D+
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVITEN---PVWIIMELCTLGELRSFLQVRKFSLDLAS 492
Query: 182 IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV 241
+ +A Q+ L YL S +HRD+ N+ V+ N VK+GD GL+ M+ T
Sbjct: 493 LILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTYYKA 549
Query: 242 IGTP---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEY-PYSECKN 285
++MAPE + + D++ FG+C+ E++ P+ KN
Sbjct: 550 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 598
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 20/218 (9%)
Query: 74 PSGRYVRYDEVLGKGAFKTVYKAF---DEFAGIEVAWSRV-KIDDVLQLPGDLQKLYSEV 129
PS V ++EV+G+G F VY ++ I A + +I D+ G++ + +E
Sbjct: 46 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI----GEVSQFLTEG 101
Query: 130 HLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNWARQ 188
++K NV+ + + + ++ G+LR + R + N +K + + Q
Sbjct: 102 IIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 160
Query: 189 ILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP--- 245
+ G+ YL S +HRDL N ++ VK+ D GLA M SV
Sbjct: 161 VAKGMKYLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNKTGAK 217
Query: 246 ---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 279
++MA E L +++ D++SFG+ + E++T P
Sbjct: 218 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 20/218 (9%)
Query: 74 PSGRYVRYDEVLGKGAFKTVYKAF---DEFAGIEVAWSRV-KIDDVLQLPGDLQKLYSEV 129
PS V ++EV+G+G F VY ++ I A + +I D+ G++ + +E
Sbjct: 19 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI----GEVSQFLTEG 74
Query: 130 HLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNWARQ 188
++K NV+ + + + ++ G+LR + R + N +K + + Q
Sbjct: 75 IIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 133
Query: 189 ILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP--- 245
+ G+ YL S +HRDL N ++ VK+ D GLA M SV
Sbjct: 134 VAKGMKYLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNKTGAK 190
Query: 246 ---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 279
++MA E L +++ D++SFG+ + E++T P
Sbjct: 191 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 124/282 (43%), Gaps = 33/282 (11%)
Query: 22 RLQTSPFHPQFLKTKNIKPIIA-----VFFLVAVWFLS-------GMLGTAEPPDADSD- 68
+++ +P P+ + ++ + A +F ++FL GM G D D
Sbjct: 25 KVKATPMTPEQAMKQYMQKLTAFEHHEIFSYPEIYFLGLNAKKRQGMTGGPNNGGYDDDQ 84
Query: 69 --FVEKDPSGRYVRYD--EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQK 124
+V+ RY+ +V+GKG F V KA+D VA V+ + +
Sbjct: 85 GSYVQVPHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEI 144
Query: 125 LYSEVHLLKSLKDD--NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK--NVDIK 180
E HL K KD+ NV+ +++ + + M EL S NL + KK+K +
Sbjct: 145 RILE-HLRKQDKDNTMNVIHMLENFTF--RNHICMTFELL-SMNLYELIKKNKFQGFSLP 200
Query: 181 VIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFV--NGNHGEVKIGDLGLAIAMQQPTA 238
+++ +A IL L LH + IIH DLK +NI + G G +K+ D G + Q
Sbjct: 201 LVRKFAHSILQCLDALHKNR--IIHCDLKPENILLKQQGRSG-IKVIDFGSSCYEHQ-RV 256
Query: 239 RSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 279
I + + APE + Y +D++S G CIL + YP
Sbjct: 257 YXXIQSRFYRAPEVILGARYGMPIDMWSLG-CILAELLTGYP 297
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 20/218 (9%)
Query: 74 PSGRYVRYDEVLGKGAFKTVYKAF---DEFAGIEVAWSRV-KIDDVLQLPGDLQKLYSEV 129
PS V ++EV+G+G F VY ++ I A + +I D+ G++ + +E
Sbjct: 27 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI----GEVSQFLTEG 82
Query: 130 HLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNWARQ 188
++K NV+ + + + ++ G+LR + R + N +K + + Q
Sbjct: 83 IIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 141
Query: 189 ILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP--- 245
+ G+ YL S +HRDL N ++ VK+ D GLA M SV
Sbjct: 142 VAKGMKYLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNKTGAK 198
Query: 246 ---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 279
++MA E L +++ D++SFG+ + E++T P
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 109/233 (46%), Gaps = 29/233 (12%)
Query: 63 PDADSDFVEKDPSGRYVRYDEV--LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPG 120
P D VE +Y+++ +G+G F V+KA G +VA +V +++ + G
Sbjct: 2 PAKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN--EKEG 59
Query: 121 DLQKLYSEVHLLKSLKDDNVVKFYK------SWVDDKKKTVNMITELFTSGNLRQYRKKH 174
E+ +L+ LK +NVV + S + K ++ ++ + F +L
Sbjct: 60 FPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFD-FCEHDLAGLLS-- 116
Query: 175 KNVDIKV----IKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA 230
NV +K IK + +L+GL Y+H + I+HRD+K N+ + + G +K+ D GLA
Sbjct: 117 -NVLVKFTLSEIKRVMQMLLNGLYYIHRNK--ILHRDMKAANVLITRD-GVLKLADFGLA 172
Query: 231 IAM-----QQPTA-RSVIGTPEFMAPELY--EEEYNELVDIYSFGMCILEMVT 275
A QP + + T + PEL E +Y +D++ G + EM T
Sbjct: 173 RAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA V A+D VA K+ Q ++ Y E+ L+K + N++
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ K + V ++ EL NL Q + +D + + Q+L G+ +LHS
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG 184
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP-----EFMAPE-LYE 254
IIHRDLK NI V + +KI D GLA + S + TP + APE +
Sbjct: 185 --IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILG 237
Query: 255 EEYNELVDIYSFGMCILEMV 274
Y E VDI+S G + EMV
Sbjct: 238 MGYKENVDIWSVGCIMGEMV 257
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 109/252 (43%), Gaps = 44/252 (17%)
Query: 59 TAEPPDADSDFVEKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQL 118
TA P SD+ + P +R+ ++G G++ V +A+D+ VA KI V +
Sbjct: 39 TASMPRPHSDW--QIPDRYEIRH--LIGTGSYGHVCEAYDKLEKRVVAIK--KILRVFED 92
Query: 119 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVD---DKKKTVNMITELFTSGNLRQYRKKHK 175
D +++ E+ +L L D+VVK + +K + ++ E+ S + +R
Sbjct: 93 LIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVY 152
Query: 176 NVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 235
++ IK +L G+ Y+HS I+HRDLK N VN + VK+ D GLA +
Sbjct: 153 LTELH-IKTLLYNLLVGVKYVHSAG--ILHRDLKPANCLVNQD-CSVKVCDFGLARTVDY 208
Query: 236 PT--------------------------ARSVIG---TPEFMAPE--LYEEEYNELVDIY 264
P R + G T + APE L +E Y E +D++
Sbjct: 209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVW 268
Query: 265 SFGMCILEMVTF 276
S G E++
Sbjct: 269 SIGCIFAELLNM 280
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 27/209 (12%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G+G F V+KA G +VA +V +++ + G E+ +L+ LK +NVV
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMEN--EKEGFPITALREIKILQLLKHENVVNLI 82
Query: 145 K------SWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKV----IKNWARQILHGLV 194
+ S + K ++ ++ + F +L NV +K IK + +L+GL
Sbjct: 83 EICRTKASPYNRCKGSIYLVFD-FCEHDLAGLLS---NVLVKFTLSEIKRVMQMLLNGLY 138
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM-----QQPTA-RSVIGTPEFM 248
Y+H + I+HRD+K N+ + + G +K+ D GLA A QP + + T +
Sbjct: 139 YIHRNK--ILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 195
Query: 249 APELY--EEEYNELVDIYSFGMCILEMVT 275
PEL E +Y +D++ G + EM T
Sbjct: 196 PPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA V A+D VA K+ Q ++ Y E+ L+K + N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ K + V ++ EL NL Q + +D + + Q+L G+ +LHS
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLXQVIQM--ELDHERMSYLLYQMLXGIKHLHSAG 146
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP-----EFMAPE-LYE 254
IIHRDLK NI V + +KI D GLA + S + TP + APE +
Sbjct: 147 --IIHRDLKPSNIVVKSD-XTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 255 EEYNELVDIYSFGMCILEMV 274
Y E VDI+S G + EMV
Sbjct: 200 MGYKENVDIWSVGCIMGEMV 219
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 20/218 (9%)
Query: 74 PSGRYVRYDEVLGKGAFKTVYKAF---DEFAGIEVAWSRV-KIDDVLQLPGDLQKLYSEV 129
PS V ++EV+G+G F VY ++ I A + +I D+ G++ + +E
Sbjct: 25 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI----GEVSQFLTEG 80
Query: 130 HLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNWARQ 188
++K NV+ + + + ++ G+LR + R + N +K + + Q
Sbjct: 81 IIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 139
Query: 189 ILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP--- 245
+ G+ YL S +HRDL N ++ VK+ D GLA M SV
Sbjct: 140 VAKGMKYLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNKTGAK 196
Query: 246 ---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 279
++MA E L +++ D++SFG+ + E++T P
Sbjct: 197 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA V A+D VA K+ Q ++ Y E+ L+K + N++
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ K + V ++ EL NL Q + +D + + Q+L G+ +LHS
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELM-DANLXQVIQM--ELDHERMSYLLYQMLXGIKHLHSAG 139
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP-----EFMAPE-LYE 254
IIHRDLK NI V + +KI D GLA + S + TP + APE +
Sbjct: 140 --IIHRDLKPSNIVVKSD-XTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILG 192
Query: 255 EEYNELVDIYSFGMCILEMV 274
Y E VDI+S G + EMV
Sbjct: 193 MGYKENVDIWSVGCIMGEMV 212
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA V A+D VA K+ Q ++ Y E+ L+K + N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ K + V ++ EL NL Q + +D + + Q+L G+ +LHS
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLXQVIQM--ELDHERMSYLLYQMLXGIKHLHSAG 146
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP-----EFMAPE-LYE 254
IIHRDLK NI V + +KI D GLA + S + TP + APE +
Sbjct: 147 --IIHRDLKPSNIVVKSD-XTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 255 EEYNELVDIYSFGMCILEMV 274
Y E VDI+S G + EMV
Sbjct: 200 MGYKENVDIWSVGCIMGEMV 219
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 98/229 (42%), Gaps = 16/229 (6%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDD 138
+ D+V+G G F V + + +K V + E ++
Sbjct: 35 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 94
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NWARQILHGLVYL 196
N+++ V K K V ++TE +G+L + +KH + VI+ R I G+ YL
Sbjct: 95 NIIRLEG--VVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYL 151
Query: 197 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP-----TARSVIGTPEFMAPE 251
+HRDL NI +N N K+ D GL+ ++ T R + +PE
Sbjct: 152 SDMG--YVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 208
Query: 252 -LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQIFKKVTSGIK 298
+ ++ D++S+G+ + E++++ E PY E N + K V G +
Sbjct: 209 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGYR 256
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 98/229 (42%), Gaps = 16/229 (6%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDD 138
+ D+V+G G F V + + +K V + E ++
Sbjct: 18 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NWARQILHGLVYL 196
N+++ V K K V ++TE +G+L + +KH + VI+ R I G+ YL
Sbjct: 78 NIIRLEG--VVTKSKPVMIVTEXMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYL 134
Query: 197 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP-----TARSVIGTPEFMAPE 251
+HRDL NI +N N K+ D GL+ ++ T R + +PE
Sbjct: 135 SDMG--YVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 191
Query: 252 -LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQIFKKVTSGIK 298
+ ++ D++S+G+ + E++++ E PY E N + K V G +
Sbjct: 192 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGYR 239
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 101/245 (41%), Gaps = 51/245 (20%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQL-PGDLQKLYSEVHLLKSLKDDNVVKF 143
+G+G++ V A + A + + + Q+ P D++++ +EV L+K L N+ +
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 144 YKSWVDDKKKTVNM-------------------------------------ITELFTSGN 166
Y+ + D++ + M E +G+
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 167 LRQYRKKHKNVDI-KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHG-EVKI 224
+ +R+ V K+I N RQI L YLH N I HRD+K +N + N E+K+
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLH--NQGICHRDIKPENFLFSTNKSFEIKL 211
Query: 225 GDLGLAIAMQQPT------ARSVIGTPEFMAPELY---EEEYNELVDIYSFGMCILEMVT 275
D GL+ + + GTP F+APE+ E Y D +S G+ + ++
Sbjct: 212 VDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLM 271
Query: 276 FEYPY 280
P+
Sbjct: 272 GAVPF 276
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 91/200 (45%), Gaps = 22/200 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA V A+D VA K+ Q ++ Y E+ L+K + N++
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ K + V ++ EL NL Q + +D + + Q+L G+ +LHS
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLSQVIQM--ELDHERMSYLLYQMLVGIKHLHSAG 146
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP-----EFMAPE-LYE 254
IIHRDLK NI V + +KI D GLA + S + TP + APE +
Sbjct: 147 --IIHRDLKPSNIVVKSD-ATLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 255 EEYNELVDIYSFGMCILEMV 274
Y E VDI+S G+ + EM+
Sbjct: 200 MGYKENVDIWSVGVIMGEMI 219
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 20/218 (9%)
Query: 74 PSGRYVRYDEVLGKGAFKTVYKAF---DEFAGIEVAWSRV-KIDDVLQLPGDLQKLYSEV 129
PS V ++EV+G+G F VY ++ I A + +I D+ G++ + +E
Sbjct: 22 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI----GEVSQFLTEG 77
Query: 130 HLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNWARQ 188
++K NV+ + + + ++ G+LR + R + N +K + + Q
Sbjct: 78 IIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 136
Query: 189 ILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP--- 245
+ G+ YL S +HRDL N ++ VK+ D GLA M SV
Sbjct: 137 VAKGMKYLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNKTGAK 193
Query: 246 ---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 279
++MA E L +++ D++SFG+ + E++T P
Sbjct: 194 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 20/218 (9%)
Query: 74 PSGRYVRYDEVLGKGAFKTVYKAF---DEFAGIEVAWSRV-KIDDVLQLPGDLQKLYSEV 129
PS V ++EV+G+G F VY ++ I A + +I D+ G++ + +E
Sbjct: 24 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI----GEVSQFLTEG 79
Query: 130 HLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNWARQ 188
++K NV+ + + + ++ G+LR + R + N +K + + Q
Sbjct: 80 IIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 138
Query: 189 ILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP--- 245
+ G+ YL S +HRDL N ++ VK+ D GLA M SV
Sbjct: 139 VAKGMKYLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNKTGAK 195
Query: 246 ---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 279
++MA E L +++ D++SFG+ + E++T P
Sbjct: 196 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 98/229 (42%), Gaps = 16/229 (6%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDD 138
+ D+V+G G F V + + +K V + E ++
Sbjct: 18 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK--NWARQILHGLVYL 196
N+++ V K K V ++TE +G+L + +KH + VI+ R I G+ YL
Sbjct: 78 NIIRLEG--VVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYL 134
Query: 197 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP-----TARSVIGTPEFMAPE 251
+HRDL NI +N N K+ D GL+ ++ T R + +PE
Sbjct: 135 SDMG--YVHRDLAARNILINSNL-VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 191
Query: 252 -LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQIFKKVTSGIK 298
+ ++ D++S+G+ + E++++ E PY E N + K V G +
Sbjct: 192 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGYR 239
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 20/218 (9%)
Query: 74 PSGRYVRYDEVLGKGAFKTVYKAF---DEFAGIEVAWSRV-KIDDVLQLPGDLQKLYSEV 129
PS V ++EV+G+G F VY ++ I A + +I D+ G++ + +E
Sbjct: 27 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI----GEVSQFLTEG 82
Query: 130 HLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNWARQ 188
++K NV+ + + + ++ G+LR + R + N +K + + Q
Sbjct: 83 IIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 141
Query: 189 ILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP--- 245
+ G+ YL S +HRDL N ++ VK+ D GLA M SV
Sbjct: 142 VAKGMKYLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNKTGAK 198
Query: 246 ---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 279
++MA E L +++ D++SFG+ + E++T P
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 199 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA-MQQPTARS--VIGTPEFMAPELYEE 255
H +HRD+K DNI ++ N G +++ D G + M+ T +S +GTP++++PE+ +
Sbjct: 192 HQLHYVHRDIKPDNILMDMN-GHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQA 250
Query: 256 ------EYNELVDIYSFGMCILEMVTFEYPY---SECKNPAQIFKKVTSGIKPASLAKVN 306
Y D +S G+C+ EM+ E P+ S + +I P + V+
Sbjct: 251 MEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVS 310
Query: 307 DPQIKGFIEKCLVPASERLSA---KDLLKDPFL 336
+ K I + + RL +D K PF
Sbjct: 311 E-NAKDLIRRLICSREHRLGQNGIEDFKKHPFF 342
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 20/218 (9%)
Query: 74 PSGRYVRYDEVLGKGAFKTVYKAF---DEFAGIEVAWSRV-KIDDVLQLPGDLQKLYSEV 129
PS V ++EV+G+G F VY ++ I A + +I D+ G++ + +E
Sbjct: 26 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI----GEVSQFLTEG 81
Query: 130 HLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNWARQ 188
++K NV+ + + + ++ G+LR + R + N +K + + Q
Sbjct: 82 IIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 140
Query: 189 ILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP--- 245
+ G+ YL S +HRDL N ++ VK+ D GLA M SV
Sbjct: 141 VAKGMKYLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEYYSVHNKTGAK 197
Query: 246 ---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 279
++MA E L +++ D++SFG+ + E++T P
Sbjct: 198 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 186 ARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA----MQQPTARSV 241
A+ +G+ +LH ++ IHRD+K NI ++ KI D GLA A Q +
Sbjct: 130 AQGAANGINFLHENHH--IHRDIKSANILLDEAF-TAKISDFGLARASEKFAQXVXXSRI 186
Query: 242 IGTPEFMAPELYEEEYNELVDIYSFGMCILEMVT 275
+GT + APE E DIYSFG+ +LE++T
Sbjct: 187 VGTTAYXAPEALRGEITPKSDIYSFGVVLLEIIT 220
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA V A+D VA K+ Q ++ Y E+ L+K + N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ K + V ++ EL NL Q + +D + + Q+L G+ +LHS
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLSQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP-----EFMAPE-LYE 254
IIHRDLK NI V + +KI D GLA + S + TP + APE +
Sbjct: 147 --IIHRDLKPSNIVVKSD-ATLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 255 EEYNELVDIYSFGMCILEMV 274
Y E VDI+S G + EM+
Sbjct: 200 MGYKENVDIWSVGCIMGEMI 219
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 91/200 (45%), Gaps = 22/200 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA V A+D VA K+ Q ++ Y E+ L+K + N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ K + V ++ EL NL Q + +D + + Q+L G+ +LHS
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLSQVIQM--ELDHERMSYLLYQMLVGIKHLHSAG 146
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP-----EFMAPE-LYE 254
IIHRDLK NI V + +KI D GLA + S + TP + APE +
Sbjct: 147 --IIHRDLKPSNIVVKSD-ATLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 255 EEYNELVDIYSFGMCILEMV 274
Y E VDI+S G+ + EM+
Sbjct: 200 MGYKENVDIWSVGVIMGEMI 219
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 77/153 (50%), Gaps = 22/153 (14%)
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR----QILHGLVY 195
VV+ + ++ DD+ + M+ E G+L + V + WAR +++ L
Sbjct: 131 VVQLFYAFQDDR--YLYMVMEYMPGGDLVNLMSNYD-----VPEKWARFYTAEVVLALDA 183
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP---TARSVIGTPEFMAPEL 252
+HS IHRD+K DN+ ++ + G +K+ D G + M + + +GTP++++PE+
Sbjct: 184 IHSMG--FIHRDVKPDNMLLDKS-GHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEV 240
Query: 253 YEEE-----YNELVDIYSFGMCILEMVTFEYPY 280
+ + Y D +S G+ + EM+ + P+
Sbjct: 241 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA V A+D VA K+ Q ++ Y E+ L+K + N++
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ K + V ++ EL NL Q + +D + + Q+L G+ +LHS
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG 184
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP-----EFMAPE-LYE 254
IIHRDLK NI V + +KI D GLA + S + TP + APE +
Sbjct: 185 --IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILG 237
Query: 255 EEYNELVDIYSFGMCILEMV 274
Y E VDI+S G + EMV
Sbjct: 238 MGYKENVDIWSVGCIMGEMV 257
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 20/218 (9%)
Query: 74 PSGRYVRYDEVLGKGAFKTVYKAF---DEFAGIEVAWSRV-KIDDVLQLPGDLQKLYSEV 129
PS V ++EV+G+G F VY ++ I A + +I D+ G++ + +E
Sbjct: 86 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI----GEVSQFLTEG 141
Query: 130 HLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNWARQ 188
++K NV+ + + + ++ G+LR + R + N +K + + Q
Sbjct: 142 IIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 200
Query: 189 ILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP--- 245
+ G+ +L S +HRDL N ++ VK+ D GLA M SV
Sbjct: 201 VAKGMKFLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFDSVHNKTGAK 257
Query: 246 ---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 279
++MA E L +++ D++SFG+ + E++T P
Sbjct: 258 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA V A+D VA K+ Q ++ Y E+ L+K + N++
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ K + V ++ EL NL Q + +D + + Q+L G+ +LHS
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG 147
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP-----EFMAPE-LYE 254
IIHRDLK NI V + +KI D GLA + S + TP + APE +
Sbjct: 148 --IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILG 200
Query: 255 EEYNELVDIYSFGMCILEMV 274
Y E VDI+S G + EMV
Sbjct: 201 MGYKENVDIWSVGCIMGEMV 220
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 77/153 (50%), Gaps = 22/153 (14%)
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR----QILHGLVY 195
VV+ + ++ DD+ + M+ E G+L + V + WAR +++ L
Sbjct: 136 VVQLFYAFQDDR--YLYMVMEYMPGGDLVNLMSNYD-----VPEKWARFYTAEVVLALDA 188
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP---TARSVIGTPEFMAPEL 252
+HS IHRD+K DN+ ++ + G +K+ D G + M + + +GTP++++PE+
Sbjct: 189 IHSMG--FIHRDVKPDNMLLDKS-GHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEV 245
Query: 253 YEEE-----YNELVDIYSFGMCILEMVTFEYPY 280
+ + Y D +S G+ + EM+ + P+
Sbjct: 246 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 30/195 (15%)
Query: 199 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP-TARS--VIGTPEFMAPELYEE 255
H +HRD+K DN+ ++ N G +++ D G + M T +S +GTP++++PE+ +
Sbjct: 208 HQLHYVHRDIKPDNVLLDVN-GHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQA 266
Query: 256 ------EYNELVDIYSFGMCILEMVTFEYPY---SECKNPAQIFKKVTSGIKPASLAKVN 306
+Y D +S G+C+ EM+ E P+ S + +I P+ + V+
Sbjct: 267 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVS 326
Query: 307 DPQIKGFIEKCLVPASERLSA---KDLLKDPFLQVENQKEPICDPLKLPIQSLKMLRLP- 362
+ + K I++ + RL +D K F + N + I++L+ +P
Sbjct: 327 E-EAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLNWEN---------IRNLEAPYIPD 376
Query: 363 MSGP---SSMDIDSD 374
+S P S+ D+D D
Sbjct: 377 VSSPSDTSNFDVDDD 391
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 102/252 (40%), Gaps = 16/252 (6%)
Query: 56 MLGTAEPPDADSDFVEKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDV 115
M T E P+ K+ + + V+G G F V + G +K V
Sbjct: 1 MPHTYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKV 60
Query: 116 LQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK 175
+ E ++ N++ V K K V ++TE +G+L + KK+
Sbjct: 61 GYTEKQRRDFLGEASIMGQFDHPNIIHL--EGVVTKSKPVMIVTEYMENGSLDTFLKKND 118
Query: 176 NVDIKVIK--NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAM 233
VI+ R I G+ YL +HRDL NI +N N K+ D GL+ +
Sbjct: 119 G-QFTVIQLVGMLRGISAGMKYLSDMG--YVHRDLAARNILINSNL-VCKVSDFGLSRVL 174
Query: 234 QQP-----TARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNP 286
+ T R + APE + ++ D++S+G+ + E+V++ E PY E N
Sbjct: 175 EDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTN- 233
Query: 287 AQIFKKVTSGIK 298
+ K V G +
Sbjct: 234 QDVIKAVEEGYR 245
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 89/215 (41%), Gaps = 35/215 (16%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL-KDDNVV 141
E +G G F +V+K G A R K L D Q EV+ L + +VV
Sbjct: 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSK--KPLAGSVDEQNALREVYAHAVLGQHSHVV 74
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNL-----RQYRKKHKNVDIKVIKNWARQILHGLVYL 196
+++ +W +D + E G+L YR + + +K+ Q+ GL Y+
Sbjct: 75 RYFSAWAEDDHMLIQ--NEYCNGGSLADAISENYRIMSYFKEAE-LKDLLLQVGRGLRYI 131
Query: 197 HSHNPPIIHRDLKCDNIFVN------------------GNHGEVKIGDLGLAIAMQQPTA 238
HS + ++H D+K NIF++ N KIGDLG + P
Sbjct: 132 HSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV 189
Query: 239 RSVIGTPEFMAPELYEEEYNEL--VDIYSFGMCIL 271
G F+A E+ +E Y L DI++ + ++
Sbjct: 190 EE--GDSRFLANEVLQENYTHLPKADIFALALTVV 222
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 30/195 (15%)
Query: 199 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP-TARS--VIGTPEFMAPELYEE 255
H +HRD+K DN+ ++ N G +++ D G + M T +S +GTP++++PE+ +
Sbjct: 192 HQLHYVHRDIKPDNVLLDVN-GHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQA 250
Query: 256 ------EYNELVDIYSFGMCILEMVTFEYPY---SECKNPAQIFKKVTSGIKPASLAKVN 306
+Y D +S G+C+ EM+ E P+ S + +I P+ + V+
Sbjct: 251 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVS 310
Query: 307 DPQIKGFIEKCLVPASERLSA---KDLLKDPFLQVENQKEPICDPLKLPIQSLKMLRLP- 362
+ + K I++ + RL +D K F + N + I++L+ +P
Sbjct: 311 E-EAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLNWEN---------IRNLEAPYIPD 360
Query: 363 MSGP---SSMDIDSD 374
+S P S+ D+D D
Sbjct: 361 VSSPSDTSNFDVDDD 375
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 77/153 (50%), Gaps = 22/153 (14%)
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWAR----QILHGLVY 195
VV+ + ++ DD+ + M+ E G+L + V + WAR +++ L
Sbjct: 136 VVQLFYAFQDDR--YLYMVMEYMPGGDLVNLMSNYD-----VPEKWARFYTAEVVLALDA 188
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP---TARSVIGTPEFMAPEL 252
+HS IHRD+K DN+ ++ + G +K+ D G + M + + +GTP++++PE+
Sbjct: 189 IHSMG--FIHRDVKPDNMLLDKS-GHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEV 245
Query: 253 YEEE-----YNELVDIYSFGMCILEMVTFEYPY 280
+ + Y D +S G+ + EM+ + P+
Sbjct: 246 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA V A+D VA K+ Q ++ Y E+ L+K + N++
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ K + V ++ EL NL Q + +D + + Q+L G+ +LHS
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG 140
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP-----EFMAPE-LYE 254
IIHRDLK NI V + +KI D GLA + S + TP + APE +
Sbjct: 141 --IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILG 193
Query: 255 EEYNELVDIYSFGMCILEMV 274
Y E VDI+S G + EMV
Sbjct: 194 MGYKENVDIWSVGCIMGEMV 213
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA V A+D VA K+ Q ++ Y E+ L+K + N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ K + V ++ EL NL Q + +D + + Q+L G+ +LHS
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP-----EFMAPE-LYE 254
IIHRDLK NI V + +KI D GLA + S + TP + APE +
Sbjct: 147 --IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 255 EEYNELVDIYSFGMCILEMV 274
Y E VDI+S G + EMV
Sbjct: 200 MGYKENVDIWSVGCIMGEMV 219
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 89/215 (41%), Gaps = 35/215 (16%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL-KDDNVV 141
E +G G F +V+K G A R K L D Q EV+ L + +VV
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSK--KPLAGSVDEQNALREVYAHAVLGQHSHVV 72
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNL-----RQYRKKHKNVDIKVIKNWARQILHGLVYL 196
+++ +W +D + E G+L YR + + +K+ Q+ GL Y+
Sbjct: 73 RYFSAWAEDDHMLIQ--NEYCNGGSLADAISENYRIMSYFKEAE-LKDLLLQVGRGLRYI 129
Query: 197 HSHNPPIIHRDLKCDNIFVN------------------GNHGEVKIGDLGLAIAMQQPTA 238
HS + ++H D+K NIF++ N KIGDLG + P
Sbjct: 130 HSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV 187
Query: 239 RSVIGTPEFMAPELYEEEYNEL--VDIYSFGMCIL 271
G F+A E+ +E Y L DI++ + ++
Sbjct: 188 EE--GDSRFLANEVLQENYTHLPKADIFALALTVV 220
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA V A+D VA K+ Q ++ Y E+ L+K + N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ K + V ++ EL NL Q + +D + + Q+L G+ +LHS
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP-----EFMAPE-LYE 254
IIHRDLK NI V + +KI D GLA + S + TP + APE +
Sbjct: 147 --IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 255 EEYNELVDIYSFGMCILEMV 274
Y E VDI+S G + EMV
Sbjct: 200 MGYKENVDIWSVGCIMGEMV 219
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA V A+D VA K+ Q ++ Y E+ L+K + N++
Sbjct: 31 IGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 88
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ K + V ++ EL NL Q + +D + + Q+L G+ +LHS
Sbjct: 89 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG 145
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP-----EFMAPE-LYE 254
IIHRDLK NI V + +KI D GLA + S + TP + APE +
Sbjct: 146 --IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILG 198
Query: 255 EEYNELVDIYSFGMCILEMV 274
Y E VDI+S G + EMV
Sbjct: 199 MGYKENVDIWSVGCIMGEMV 218
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 100/204 (49%), Gaps = 21/204 (10%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+ +GKG F V ++ G +VA +K D Q +E ++ L+ N+V+
Sbjct: 27 QTIGKGEFGDVM--LGDYRGNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQ 78
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNV-DIKVIKNWARQILHGLVYLHSHN 200
V++K + ++TE G+L Y R + ++V + ++ + + YL +N
Sbjct: 79 LLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 137
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPE-LYEEEY 257
+HRDL N+ V+ ++ K+ D GL + Q T + + ++ APE L E+++
Sbjct: 138 --FVHRDLAARNVLVSEDN-VAKVSDFGLTKEASSTQDTGKLPV---KWTAPEALREKKF 191
Query: 258 NELVDIYSFGMCILEMVTF-EYPY 280
+ D++SFG+ + E+ +F PY
Sbjct: 192 STKSDVWSFGILLWEIYSFGRVPY 215
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA V A+D VA K+ Q ++ Y E+ L+K + N++
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ K + V ++ EL NL Q + +D + + Q+L G+ +LHS
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG 147
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP-----EFMAPE-LYE 254
IIHRDLK NI V + +KI D GLA + S + TP + APE +
Sbjct: 148 --IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILG 200
Query: 255 EEYNELVDIYSFGMCILEMV 274
Y E VDI+S G + EMV
Sbjct: 201 MGYKENVDIWSVGCIMGEMV 220
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 89/215 (41%), Gaps = 35/215 (16%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL-KDDNVV 141
E +G G F +V+K G A R K L D Q EV+ L + +VV
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSK--KPLAGSVDEQNALREVYAHAVLGQHSHVV 72
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNL-----RQYRKKHKNVDIKVIKNWARQILHGLVYL 196
+++ +W +D + E G+L YR + + +K+ Q+ GL Y+
Sbjct: 73 RYFSAWAEDDHMLIQ--NEYCNGGSLADAISENYRIMSYFKEAE-LKDLLLQVGRGLRYI 129
Query: 197 HSHNPPIIHRDLKCDNIFVN------------------GNHGEVKIGDLGLAIAMQQPTA 238
HS + ++H D+K NIF++ N KIGDLG + P
Sbjct: 130 HSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV 187
Query: 239 RSVIGTPEFMAPELYEEEYNEL--VDIYSFGMCIL 271
G F+A E+ +E Y L DI++ + ++
Sbjct: 188 EE--GDSRFLANEVLQENYTHLPKADIFALALTVV 220
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA V A+D VA K+ Q ++ Y E+ L+K + N++
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ K + V ++ EL NL Q + +D + + Q+L G+ +LHS
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG 140
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP-----EFMAPE-LYE 254
IIHRDLK NI V + +KI D GLA + S + TP + APE +
Sbjct: 141 --IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILG 193
Query: 255 EEYNELVDIYSFGMCILEMV 274
Y E VDI+S G + EMV
Sbjct: 194 MGYKENVDIWSVGCIMGEMV 213
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA V A+D VA K+ Q ++ Y E+ L+K + N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ K + V ++ EL NL Q + +D + + Q+L G+ +LHS
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLXQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP-----EFMAPE-LYE 254
IIHRDLK NI V + +KI D GLA + S + TP + APE +
Sbjct: 147 --IIHRDLKPSNIVVKSD-XTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 255 EEYNELVDIYSFGMCILEMV 274
Y E VDI+S G + EMV
Sbjct: 200 MGYKENVDIWSVGCIMGEMV 219
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 89/215 (41%), Gaps = 35/215 (16%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL-KDDNVV 141
E +G G F +V+K G A R K L D Q EV+ L + +VV
Sbjct: 13 EKIGSGEFGSVFKCVKRLDGCIYAIKRSK--KPLAGSVDEQNALREVYAHAVLGQHSHVV 70
Query: 142 KFYKSWVDDKKKTVNMITELFTSGNL-----RQYRKKHKNVDIKVIKNWARQILHGLVYL 196
+++ +W +D + E G+L YR + + +K+ Q+ GL Y+
Sbjct: 71 RYFSAWAEDDHMLIQ--NEYCNGGSLADAISENYRIMSYFKEAE-LKDLLLQVGRGLRYI 127
Query: 197 HSHNPPIIHRDLKCDNIFVN------------------GNHGEVKIGDLGLAIAMQQPTA 238
HS + ++H D+K NIF++ N KIGDLG + P
Sbjct: 128 HSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV 185
Query: 239 RSVIGTPEFMAPELYEEEYNEL--VDIYSFGMCIL 271
G F+A E+ +E Y L DI++ + ++
Sbjct: 186 EE--GDSRFLANEVLQENYTHLPKADIFALALTVV 218
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA V A+D VA K+ Q ++ Y E+ L+K + N++
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ K + V ++ EL NL Q + +D + + Q+L G+ +LHS
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG 139
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP-----EFMAPE-LYE 254
IIHRDLK NI V + +KI D GLA + S + TP + APE +
Sbjct: 140 --IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILG 192
Query: 255 EEYNELVDIYSFGMCILEMV 274
Y E VDI+S G + EMV
Sbjct: 193 MGYKENVDIWSVGCIMGEMV 212
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 22/201 (10%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA V A+D VA K+ Q ++ Y E+ L+K + N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ K + V ++ EL NL Q + +D + + Q+L G+ +LHS
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE-----FMAPE-LYE 254
IIHRDLK NI V + +KI D GLA + S + PE + APE +
Sbjct: 147 --IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMEPEVVTRYYRAPEVILG 199
Query: 255 EEYNELVDIYSFGMCILEMVT 275
Y E VDI+S G + EMV
Sbjct: 200 MGYKENVDIWSVGCIMGEMVC 220
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA V A+D VA K+ Q ++ Y E+ L+K + N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ K + V ++ EL NL Q + +D + + Q+L G+ +LHS
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLSQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP-----EFMAPE-LYE 254
IIHRDLK NI V + +KI D GLA + S + TP + APE +
Sbjct: 147 --IIHRDLKPSNIVVKSD-ATLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 255 EEYNELVDIYSFGMCILEMV 274
Y E VDI+S G + EM+
Sbjct: 200 MGYKENVDIWSVGCIMGEMI 219
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVL-QLPGDLQKLYSEVHLLKSLKDD----- 138
LG G F TV+ A D VA V+ D V + D KL V+ + K+D
Sbjct: 27 LGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGAN 86
Query: 139 NVVKFYKSWVDDKKKTVN--MITELFTSGNLRQYRK-KHKNVDIKVIKNWARQILHGLVY 195
+++K + V+ M+ E+ L +K +H+ + + +K ++Q+L GL Y
Sbjct: 87 HILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDY 146
Query: 196 LHSHNPPIIHRDLKCDNIFVN-----GNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAP 250
+H IIH D+K +N+ + N ++KI DLG A + S I T E+ +P
Sbjct: 147 MHR-RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNS-IQTREYRSP 204
Query: 251 E-LYEEEYNELVDIYSFGMCILEMVTFEYPY 280
E L + DI+S I E++T ++ +
Sbjct: 205 EVLLGAPWGCGADIWSTACLIFELITGDFLF 235
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 100/204 (49%), Gaps = 21/204 (10%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+ +GKG F V ++ G +VA +K D Q +E ++ L+ N+V+
Sbjct: 199 QTIGKGEFGDV--MLGDYRGNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQ 250
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNV-DIKVIKNWARQILHGLVYLHSHN 200
V++K + ++TE G+L Y R + ++V + ++ + + YL +N
Sbjct: 251 LLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 309
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPE-LYEEEY 257
+HRDL N+ V+ ++ K+ D GL + Q T + + ++ APE L E+++
Sbjct: 310 --FVHRDLAARNVLVSEDN-VAKVSDFGLTKEASSTQDTGKLPV---KWTAPEALREKKF 363
Query: 258 NELVDIYSFGMCILEMVTF-EYPY 280
+ D++SFG+ + E+ +F PY
Sbjct: 364 STKSDVWSFGILLWEIYSFGRVPY 387
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA V A+D VA K+ Q ++ Y E+ L+K + N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ K + V ++ EL NL Q + +D + + Q+L G+ +LHS
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLSQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP-----EFMAPE-LYE 254
IIHRDLK NI V + +KI D GLA + S + TP + APE +
Sbjct: 147 --IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 255 EEYNELVDIYSFGMCILEMV 274
Y E VDI+S G + EM+
Sbjct: 200 MGYKENVDIWSVGCIMGEMI 219
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 105/237 (44%), Gaps = 28/237 (11%)
Query: 55 GMLGTAEPPDADSDF--VEKDPSGRYV--RYDEV--LGKGAFKTVYKAFDEFAGIEVAWS 108
G LG+ D++F VE S V RY + +G GA V A+D VA
Sbjct: 1 GPLGSMSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIK 60
Query: 109 RVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKK----KTVNMITELFTS 164
K+ Q ++ Y E+ L+K + N++ + K + V ++ EL
Sbjct: 61 --KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-D 117
Query: 165 GNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKI 224
NL Q + +D + + Q+L G+ +LHS IIHRDLK NI V + +KI
Sbjct: 118 ANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKI 172
Query: 225 GDLGLAIAMQQPTARSVIGTP-----EFMAPE-LYEEEYNELVDIYSFGMCILEMVT 275
D GLA + S + TP + APE + Y E VD++S G + EMV
Sbjct: 173 LDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVC 225
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA V A+D VA K+ Q ++ Y E+ L+K + N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ K + V ++ EL NL Q + +D + + Q+L G+ +LHS
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLSQVIQM--ELDHERMSYLLYQMLVGIKHLHSAG 146
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP-----EFMAPE-LYE 254
IIHRDLK NI V + +KI D GLA + S + TP + APE +
Sbjct: 147 --IIHRDLKPSNIVVKSD-ATLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 255 EEYNELVDIYSFGMCILEMV 274
Y E VDI+S G + EM+
Sbjct: 200 MGYKENVDIWSVGCIMGEMI 219
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 100/204 (49%), Gaps = 21/204 (10%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+ +GKG F V ++ G +VA +K D Q +E ++ L+ N+V+
Sbjct: 12 QTIGKGEFGDV--MLGDYRGNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQ 63
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNV-DIKVIKNWARQILHGLVYLHSHN 200
V++K + ++TE G+L Y R + ++V + ++ + + YL +N
Sbjct: 64 LLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 122
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPE-LYEEEY 257
+HRDL N+ V+ ++ K+ D GL + Q T + + ++ APE L E+++
Sbjct: 123 --FVHRDLAARNVLVSEDN-VAKVSDFGLTKEASSTQDTGKLPV---KWTAPEALREKKF 176
Query: 258 NELVDIYSFGMCILEMVTF-EYPY 280
+ D++SFG+ + E+ +F PY
Sbjct: 177 STKSDVWSFGILLWEIYSFGRVPY 200
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVL-QLPGDLQKLYSEVHLLKSLKDD----- 138
LG G F TV+ A D VA V+ D V + D KL V+ + K+D
Sbjct: 27 LGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGAN 86
Query: 139 NVVKFYKSWVDDKKKTVN--MITELFTSGNLRQYRK-KHKNVDIKVIKNWARQILHGLVY 195
+++K + V+ M+ E+ L +K +H+ + + +K ++Q+L GL Y
Sbjct: 87 HILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDY 146
Query: 196 LHSHNPPIIHRDLKCDNIFVN-----GNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAP 250
+H IIH D+K +N+ + N ++KI DLG A + S I T E+ +P
Sbjct: 147 MHR-RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNS-IQTREYRSP 204
Query: 251 E-LYEEEYNELVDIYSFGMCILEMVTFEYPY 280
E L + DI+S I E++T ++ +
Sbjct: 205 EVLLGAPWGCGADIWSTACLIFELITGDFLF 235
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 106/232 (45%), Gaps = 26/232 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQK-LYSEVHLLKSLKDDNVVKF 143
LG+GAF V+ A E V + + + +K + E LL +L+ +++VKF
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 144 YKSWVDDKKKTVNMITELFTSGNLRQYRKKH-------------KNVDIKVIKNWARQIL 190
Y V+ + M+ E G+L ++ + H + + + A+QI
Sbjct: 81 YGVCVEGDP--LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIA 138
Query: 191 HGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP----E 246
G+VYL S + +HRDL N V G + VKIGD G++ + V G
Sbjct: 139 AGMVYLASQH--FVHRDLATRNCLV-GENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 195
Query: 247 FMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQIFKKVTSG 296
+M PE + ++ D++S G+ + E+ T+ + P+ + N ++ + +T G
Sbjct: 196 WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN-NEVIECITQG 246
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 20/218 (9%)
Query: 74 PSGRYVRYDEVLGKGAFKTVYKAF---DEFAGIEVAWSRV-KIDDVLQLPGDLQKLYSEV 129
PS V ++EV+G+G F VY ++ I A + +I D+ G++ + +E
Sbjct: 32 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI----GEVSQFLTEG 87
Query: 130 HLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNWARQ 188
++K NV+ + + + ++ G+LR + R + N +K + + Q
Sbjct: 88 IIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 146
Query: 189 ILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP--- 245
+ G+ +L S +HRDL N ++ VK+ D GLA M SV
Sbjct: 147 VAKGMKFLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFDSVHNKTGAK 203
Query: 246 ---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 279
++MA E L +++ D++SFG+ + E++T P
Sbjct: 204 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 20/218 (9%)
Query: 74 PSGRYVRYDEVLGKGAFKTVYKAF---DEFAGIEVAWSRV-KIDDVLQLPGDLQKLYSEV 129
PS V ++EV+G+G F VY ++ I A + +I D+ G++ + +E
Sbjct: 27 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI----GEVSQFLTEG 82
Query: 130 HLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNWARQ 188
++K NV+ + + + ++ G+LR + R + N +K + + Q
Sbjct: 83 IIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 141
Query: 189 ILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP--- 245
+ G+ +L S +HRDL N ++ VK+ D GLA M SV
Sbjct: 142 VAKGMKFLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFDSVHNKTGAK 198
Query: 246 ---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 279
++MA E L +++ D++SFG+ + E++T P
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 21/204 (10%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+ +GKG F V ++ G +VA +K D Q +E ++ L+ N+V+
Sbjct: 18 QTIGKGEFGDVM--LGDYRGNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQ 69
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNV-DIKVIKNWARQILHGLVYLHSHN 200
V++K + ++TE G+L Y R + ++V + ++ + + YL +N
Sbjct: 70 LLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 128
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLA--IAMQQPTARSVIGTPEFMAPE-LYEEEY 257
+HRDL N+ V+ ++ K+ D GL + Q T + + ++ APE L E +
Sbjct: 129 --FVHRDLAARNVLVSEDN-VAKVSDFGLTKEASSTQDTGKLPV---KWTAPEALREAAF 182
Query: 258 NELVDIYSFGMCILEMVTF-EYPY 280
+ D++SFG+ + E+ +F PY
Sbjct: 183 STKSDVWSFGILLWEIYSFGRVPY 206
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 39/225 (17%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVK--IDDVLQLPGDLQKLYSEVHLLKSLKDDNV 140
++G+G++ VY A+D+ VA +V +D++ D +++ E+ +L LK D +
Sbjct: 32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLI----DCKRILREITILNRLKSDYI 87
Query: 141 VKFYKSWVDD---KKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLH 197
++ Y + D K + ++ E+ S +L++ K + + IK +L G ++H
Sbjct: 88 IRLYDLIIPDDLLKFDELYIVLEIADS-DLKKLFKTPIFLTEEHIKTILYNLLLGENFIH 146
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE----------- 246
IIHRDLK N +N + VK+ D GLA + +++ E
Sbjct: 147 ESG--IIHRDLKPANCLLNQD-CSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKN 203
Query: 247 -------------FMAPE--LYEEEYNELVDIYSFGMCILEMVTF 276
+ APE L +E Y + +DI+S G E++
Sbjct: 204 LKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNM 248
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 124/272 (45%), Gaps = 25/272 (9%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVK 142
+V+G+GAF V + G A + D+L+ G++ E +L + + +
Sbjct: 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKR-GEVSCFREERDVLVNGDRRWITQ 125
Query: 143 FYKSWVDDKKKTVNMITELFTSGNLRQYRKKH-KNVDIKVIKNWARQILHGLVYLHSHNP 201
+ ++ D+ + ++ E + G+L K + + ++ + + +I+ + +H
Sbjct: 126 LHFAFQDEN--YLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLG- 182
Query: 202 PIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ-PTARSV--IGTPEFMAPELYEEEYN 258
+HRD+K DNI ++ G +++ D G + ++ T RS+ +GTP++++PE+ +
Sbjct: 183 -YVHRDIKPDNILLD-RCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGG 240
Query: 259 EL--------VDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVND--- 307
D ++ G+ EM + P+ + A+ + K+ + SL V++
Sbjct: 241 GPGTGSYGPECDWWALGVFAYEMFYGQTPFY-ADSTAETYGKIVHYKEHLSLPLVDEGVP 299
Query: 308 PQIKGFIEKCLVPASERL---SAKDLLKDPFL 336
+ + FI++ L P RL A D PF
Sbjct: 300 EEARDFIQRLLCPPETRLGRGGAGDFRTHPFF 331
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA V A+D VA K+ Q ++ Y E+ L+K + N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ K + V ++ EL NL Q + +D + + Q+L G+ +LHS
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP-----EFMAPE-LYE 254
IIHRDLK NI V + +KI D GLA + S + TP + APE +
Sbjct: 147 --IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 255 EEYNELVDIYSFGMCILEMV 274
Y E VDI+S G + EM+
Sbjct: 200 MGYKENVDIWSVGCIMGEMI 219
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA V A+D VA K+ Q ++ Y E+ L+K + N++
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 90
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ K + V ++ EL NL Q + +D + + Q+L G+ +LHS
Sbjct: 91 NVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG 147
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP-----EFMAPE-LYE 254
IIHRDLK NI V + +KI D GLA + S + TP + APE +
Sbjct: 148 --IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILG 200
Query: 255 EEYNELVDIYSFGMCILEMV 274
Y E VDI+S G + EM+
Sbjct: 201 MGYKENVDIWSVGCIMGEMI 220
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 20/218 (9%)
Query: 74 PSGRYVRYDEVLGKGAFKTVYKAF---DEFAGIEVAWSRV-KIDDVLQLPGDLQKLYSEV 129
PS V ++EV+G+G F VY ++ I A + +I D+ G++ + +E
Sbjct: 28 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI----GEVSQFLTEG 83
Query: 130 HLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNWARQ 188
++K NV+ + + + ++ G+LR + R + N +K + + Q
Sbjct: 84 IIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 142
Query: 189 ILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP--- 245
+ G+ +L S +HRDL N ++ VK+ D GLA M SV
Sbjct: 143 VAKGMKFLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMLDKEFDSVHNKTGAK 199
Query: 246 ---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 279
++MA E L +++ D++SFG+ + E++T P
Sbjct: 200 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 20/218 (9%)
Query: 74 PSGRYVRYDEVLGKGAFKTVYKAF---DEFAGIEVAWSRV-KIDDVLQLPGDLQKLYSEV 129
PS V ++EV+G+G F VY ++ I A + +I D+ G++ + +E
Sbjct: 28 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI----GEVSQFLTEG 83
Query: 130 HLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNWARQ 188
++K NV+ + + + ++ G+LR + R + N +K + + Q
Sbjct: 84 IIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 142
Query: 189 ILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP--- 245
+ G+ +L S +HRDL N ++ VK+ D GLA M SV
Sbjct: 143 VAKGMKFLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFDSVHNKTGAK 199
Query: 246 ---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 279
++MA E L +++ D++SFG+ + E++T P
Sbjct: 200 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 20/218 (9%)
Query: 74 PSGRYVRYDEVLGKGAFKTVYKAF---DEFAGIEVAWSRV-KIDDVLQLPGDLQKLYSEV 129
PS V ++EV+G+G F VY ++ I A + +I D+ G++ + +E
Sbjct: 27 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI----GEVSQFLTEG 82
Query: 130 HLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNWARQ 188
++K NV+ + + + ++ G+LR + R + N +K + + Q
Sbjct: 83 IIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 141
Query: 189 ILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP--- 245
+ G+ +L S +HRDL N ++ VK+ D GLA M SV
Sbjct: 142 VAKGMKFLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFDSVHNKTGAK 198
Query: 246 ---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 279
++MA E L +++ D++SFG+ + E++T P
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA V A+D VA K+ Q ++ Y E+ L+K + N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIK--KLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ K + V ++ EL NL Q + +D + + Q+L G+ +LHS
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP-----EFMAPE-LYE 254
IIHRDLK NI V + +KI D GLA + S + TP + APE +
Sbjct: 147 --IIHRDLKPSNIVVKSD-XTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 255 EEYNELVDIYSFGMCILEMV 274
Y E VDI+S G + EMV
Sbjct: 200 MGYKENVDIWSVGCIMGEMV 219
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA V A+D VA K+ Q ++ Y E+ L+K + N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ K + V ++ EL NL Q + +D + + Q+L G+ +LHS
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP-----EFMAPE-LYE 254
IIHRDLK NI V + +KI D GLA + S + TP + APE +
Sbjct: 147 --IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 255 EEYNELVDIYSFGMCILEMV 274
Y E VDI+S G + EM+
Sbjct: 200 MGYKENVDIWSVGCIMGEMI 219
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 90/201 (44%), Gaps = 22/201 (10%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA V A+D VA K+ Q ++ Y E+ L+K + N++
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ K + V ++ EL NL Q + +D + + Q+L G+ +LHS
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG 146
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPE-----FMAPE-LYE 254
IIHRDLK NI V + +KI D GLA + S + PE + APE +
Sbjct: 147 --IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMEPEVVTRYYRAPEVILG 199
Query: 255 EEYNELVDIYSFGMCILEMVT 275
Y E VD++S G + EMV
Sbjct: 200 MGYKENVDLWSVGCIMGEMVC 220
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 20/218 (9%)
Query: 74 PSGRYVRYDEVLGKGAFKTVYKAF---DEFAGIEVAWSRV-KIDDVLQLPGDLQKLYSEV 129
PS V ++EV+G+G F VY ++ I A + +I D+ G++ + +E
Sbjct: 25 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI----GEVSQFLTEG 80
Query: 130 HLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNWARQ 188
++K NV+ + + + ++ G+LR + R + N +K + + Q
Sbjct: 81 IIMKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 139
Query: 189 ILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP--- 245
+ G+ +L S +HRDL N ++ VK+ D GLA M SV
Sbjct: 140 VAKGMKFLASKK--FVHRDLAARNCMLDEKF-TVKVADFGLARDMYDKEFDSVHNKTGAK 196
Query: 246 ---EFMAPE-LYEEEYNELVDIYSFGMCILEMVTFEYP 279
++MA E L +++ D++SFG+ + E++T P
Sbjct: 197 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 88/196 (44%), Gaps = 14/196 (7%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA V A+D VA K+ Q ++ Y E+ L+K + N++
Sbjct: 34 IGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 91
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ K + V ++ EL NL Q + +D + + Q+L G+ +LHS
Sbjct: 92 NVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG 148
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLA-IAMQQPTARSVIGTPEFMAPE-LYEEEYN 258
IIHRDLK NI V + +KI D GLA A + T + APE + Y
Sbjct: 149 --IIHRDLKPSNIVVKSD-CTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMGYK 205
Query: 259 ELVDIYSFGMCILEMV 274
E VDI+S G + EM+
Sbjct: 206 ENVDIWSVGCIMGEMI 221
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 102/248 (41%), Gaps = 14/248 (5%)
Query: 59 TAEPPDADSDFVEKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQL 118
T E P+ K+ ++ ++V+G G F V + G +K
Sbjct: 11 TFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYT 70
Query: 119 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNV 177
+ SE ++ N++ V K K V +ITE +G+L + RK
Sbjct: 71 DKQRRDFLSEASIMGQFDHPNIIHL--EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRF 128
Query: 178 DIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP- 236
+ + R I G+ YL + +HRDL NI VN N K+ D G++ ++
Sbjct: 129 TVIQLVGMLRGIGSGMKYLSDMSA--VHRDLAARNILVNSNL-VCKVSDFGMSRVLEDDP 185
Query: 237 ----TARSVIGTPEFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQIF 290
T R + APE + ++ D++S+G+ + E++++ E PY + N +
Sbjct: 186 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-QDVI 244
Query: 291 KKVTSGIK 298
K + G +
Sbjct: 245 KAIEEGYR 252
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 142/335 (42%), Gaps = 91/335 (27%)
Query: 82 DEVLGKGAFKTVYKAFDEFAGIEVAWSRVKID--DVLQLPGDLQKLYSEVHLLKSLKDD- 138
+++LG G+ TV F G VA R+ ID D+ + E+ LL D
Sbjct: 20 EKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDFCDIALM---------EIKLLTESDDHP 69
Query: 139 NVVKFYKSWVDDKKKTVNM------ITELFTSGNLRQYRKKHKNVDIKVIKNW-----AR 187
NV+++Y S D+ + + + +L S N+ + ++K+ K + R
Sbjct: 70 NVIRYYCSETTDRFLYIALELCNLNLQDLVESKNV-------SDENLKLQKEYNPISLLR 122
Query: 188 QILHGLVYLHSHNPPIIHRDLKCDNIFVN------------GNHGEVKIGDLGLAIAMQ- 234
QI G+ +LHS IIHRDLK NI V+ + + I D GL +
Sbjct: 123 QIASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Query: 235 -QPTARSVI----GTPEFMAPELYEEEYN--------ELVDIYSFGMCILEMVTFEYPYS 281
Q + R+ + GT + APEL EE N +DI+S G C+ F Y S
Sbjct: 181 GQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMG-CV-----FYYILS 234
Query: 282 ECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE----KCLVPASERLSAKDLLKDPFLQ 337
+ K+P G K + + + I+G KCL S A DL+ Q
Sbjct: 235 KGKHPF--------GDKYSRESNI----IRGIFSLDEMKCLHDRSLIAEATDLIS----Q 278
Query: 338 VENQKEPICDPLKLPIQSLKMLRLPMSGPSSMDID 372
+ + DPLK P ++K+LR P+ P S ++
Sbjct: 279 MIDH-----DPLKRP-TAMKVLRHPLFWPKSKKLE 307
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 134/304 (44%), Gaps = 51/304 (16%)
Query: 75 SGR----YVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQ-KLYSEV 129
SGR Y ++VLG+GA V + E A VKI + + PG ++ +++ EV
Sbjct: 7 SGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYA---VKI--IEKQPGHIRSRVFREV 61
Query: 130 HLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQI 189
+L + V + +++ + ++ E G++ + K ++ + + +
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDR-FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDV 120
Query: 190 LHGLVYLHSHNPPIIHRDLKCDNIFVN--GNHGEVKIGDLGLAIAMQ---------QPTA 238
L +LH N I HRDLK +NI VKI D GL ++ P
Sbjct: 121 ASALDFLH--NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPEL 178
Query: 239 RSVIGTPEFMAPELYE---EE---YNELVDIYSFGMCILEMVTFEYP------YSEC--- 283
+ G+ E+MAPE+ E EE Y++ D++S G+ IL ++ YP S+C
Sbjct: 179 LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGV-ILYILLSGYPPFVGRCGSDCGWD 237
Query: 284 ---KNPA---QIFKKVTSG---IKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKD 333
PA +F+ + G A ++ K I K LV A +RLSA +L+
Sbjct: 238 RGEACPACQNMLFESIQEGKYEFPDKDWAHIS-CAAKDLISKLLVRDAKQRLSAAQVLQH 296
Query: 334 PFLQ 337
P++Q
Sbjct: 297 PWVQ 300
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 90/201 (44%), Gaps = 22/201 (10%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFY 144
+G GA V A+D VA K+ Q ++ Y E+ L+K + N++
Sbjct: 26 IGSGAQGIVCAAYDAILERNVAIK--KLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 83
Query: 145 KSWVDDKK----KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHN 200
+ K + V ++ EL NL Q + +D + + Q+L G+ +LHS
Sbjct: 84 NVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG 140
Query: 201 PPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP-----EFMAPE-LYE 254
IIHRDLK NI V + +KI D GLA + S + TP + APE +
Sbjct: 141 --IIHRDLKPSNIVVKSD-CTLKILDFGLA----RTAGTSFMMTPYVVTRYYRAPEVILG 193
Query: 255 EEYNELVDIYSFGMCILEMVT 275
Y E VD++S G + EMV
Sbjct: 194 MGYKENVDLWSVGCIMGEMVC 214
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 102/254 (40%), Gaps = 17/254 (6%)
Query: 59 TAEPPDADSDFVEKDPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQL 118
T E P+ K+ ++ + V+G G F V + G +K V
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 119 PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVD 178
+ E ++ NVV V + K V ++ E +G L + +KH
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHL--EGVVTRGKPVMIVIEFMENGALDAFLRKHDG-Q 141
Query: 179 IKVIK--NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP 236
VI+ R I G+ YL +HRDL NI VN N K+ D GL+ ++
Sbjct: 142 FTVIQLVGMLRGIAAGMRYLADMG--YVHRDLAARNILVNSNL-VCKVSDFGLSRVIEDD 198
Query: 237 TARSVIGTP-----EFMAPELYE-EEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQI 289
T + APE + ++ D++S+G+ + E++++ E PY + N +
Sbjct: 199 PEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-QDV 257
Query: 290 FKKVTSGIK-PASL 302
K + G + PA +
Sbjct: 258 IKAIEEGYRLPAPM 271
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 112/251 (44%), Gaps = 34/251 (13%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQL--PGDLQKLYSEVHLLKSLKDDNV 140
++LG+GA V++ + G A +K+ + + P D+Q E +LK L N+
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFA---IKVFNNISFLRPVDVQ--MREFEVLKKLNHKNI 69
Query: 141 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV------DIKVIKNWARQILHGLV 194
VK + + + +I E G+L ++ N + ++ R ++ G+
Sbjct: 70 VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIV---LRDVVGGMN 126
Query: 195 YLHSHNPPIIHRDLKCDNIF-VNGNHGE--VKIGDLGLAIAMQQPTA-RSVIGTPEFMAP 250
+L + I+HR++K NI V G G+ K+ D G A ++ S+ GT E++ P
Sbjct: 127 HLRENG--IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHP 184
Query: 251 ELYE---------EEYNELVDIYSFGMCILEMVTFEYPYSECKNP---AQIFKKVTSGIK 298
++YE ++Y VD++S G+ T P+ + P ++ K+ +G
Sbjct: 185 DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244
Query: 299 PASLAKVNDPQ 309
+++ V +
Sbjct: 245 SGAISGVQKAE 255
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 20/148 (13%)
Query: 197 HSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPEL--YE 254
H HN ++HRD+K +NI ++ N GE+K+ D G ++ GT + PE Y
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH 231
Query: 255 EEYNELVDIYSFGMCILEMVTFEYPYSECKN--PAQIF--KKVTSGIKPASLAKVNDPQI 310
+ ++S G+ + +MV + P+ + Q+F ++V+S +
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS-------------EC 278
Query: 311 KGFIEKCL-VPASERLSAKDLLKDPFLQ 337
+ I CL + S+R + +++ P++Q
Sbjct: 279 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 111/251 (44%), Gaps = 34/251 (13%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQL--PGDLQKLYSEVHLLKSLKDDNV 140
++LG+GA V++ + G A +K+ + + P D+Q E +LK L N+
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFA---IKVFNNISFLRPVDVQ--MREFEVLKKLNHKNI 69
Query: 141 VKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV------DIKVIKNWARQILHGLV 194
VK + + + +I E G+L ++ N + ++ R ++ G+
Sbjct: 70 VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIV---LRDVVGGMN 126
Query: 195 YLHSHNPPIIHRDLKCDNIF-VNGNHGE--VKIGDLGLAIAMQQPTA-RSVIGTPEFMAP 250
+L + I+HR++K NI V G G+ K+ D G A ++ + GT E++ P
Sbjct: 127 HLRENG--IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHP 184
Query: 251 ELYE---------EEYNELVDIYSFGMCILEMVTFEYPYSECKNP---AQIFKKVTSGIK 298
++YE ++Y VD++S G+ T P+ + P ++ K+ +G
Sbjct: 185 DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244
Query: 299 PASLAKVNDPQ 309
+++ V +
Sbjct: 245 SGAISGVQKAE 255
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ-----PTARSVIGTPEFMAPEL 252
SH IIHRD+K NI ++ + VK+ D G+A A+ +VIGT ++++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNA-VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 253 YE-EEYNELVDIYSFGMCILEMVTFEYPYS 281
+ + D+YS G + E++T E P++
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP-----TARSVIGTPEFMAPEL 252
SH IIHRD+K NI ++ + VK+ D G+A A+ +VIGT ++++PE
Sbjct: 132 SHQNGIIHRDVKPANILISATNA-VKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQ 190
Query: 253 YE-EEYNELVDIYSFGMCILEMVTFEYPYS 281
+ + D+YS G + E++T E P++
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ-----PTARSVIGTPEFMAPEL 252
SH IIHRD+K NI ++ + VK+ D G+A A+ +VIGT ++++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNA-VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 253 YE-EEYNELVDIYSFGMCILEMVTFEYPYS 281
+ + D+YS G + E++T E P++
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ-----PTARSVIGTPEFMAPEL 252
SH IIHRD+K NI ++ + VK+ D G+A A+ +VIGT ++++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNA-VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 253 YE-EEYNELVDIYSFGMCILEMVTFEYPYS 281
+ + D+YS G + E++T E P++
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ-----PTARSVIGTPEFMAPEL 252
SH IIHRD+K NI ++ + VK+ D G+A A+ +VIGT ++++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNA-VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 253 YE-EEYNELVDIYSFGMCILEMVTFEYPYS 281
+ + D+YS G + E++T E P++
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ-----PTARSVIGTPEFMAPEL 252
SH IIHRD+K NI ++ + VK+ D G+A A+ +VIGT ++++PE
Sbjct: 149 SHQNGIIHRDVKPANIMISATNA-VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 207
Query: 253 YE-EEYNELVDIYSFGMCILEMVTFEYPYS 281
+ + D+YS G + E++T E P++
Sbjct: 208 ARGDSVDARSDVYSLGCVLYEVLTGEPPFT 237
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 143/332 (43%), Gaps = 85/332 (25%)
Query: 82 DEVLGKGAFKTVYKAFDEFAGIEVAWSRVKID--DVLQLPGDLQKLYSEVHLLKSLKDD- 138
+++LG G+ TV F G VA R+ ID D+ + E+ LL D
Sbjct: 20 EKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDFCDIALM---------EIKLLTESDDHP 69
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV---DIKVIKNW-----ARQIL 190
NV+++Y S D+ + + EL + NL Q + KNV ++K+ K + RQI
Sbjct: 70 NVIRYYCSETTDRFLYIAL--EL-CNLNL-QDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 191 HGLVYLHSHNPPIIHRDLKCDNIFVN------------GNHGEVKIGDLGLAIAMQ--QP 236
G+ +LHS IIHRDLK NI V+ + + I D GL + Q
Sbjct: 126 SGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 183
Query: 237 TARSVI----GTPEFMAPELYEEEYN--------ELVDIYSFGMCILEMVTFEYPYSECK 284
R + GT + APEL EE N +DI+S G C+ F Y S+ K
Sbjct: 184 XFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMG-CV-----FYYILSKGK 237
Query: 285 NPAQIFKKVTSGIKPASLAKVNDPQIKGFIE----KCLVPASERLSAKDLLKDPFLQVEN 340
+P G K + + + I+G KCL S A DL+ Q+ +
Sbjct: 238 HPF--------GDKYSRESNI----IRGIFSLDEMKCLHDRSLIAEATDLIS----QMID 281
Query: 341 QKEPICDPLKLPIQSLKMLRLPMSGPSSMDID 372
DPLK P ++K+LR P+ P S ++
Sbjct: 282 H-----DPLKRP-TAMKVLRHPLFWPKSKKLE 307
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 139/331 (41%), Gaps = 87/331 (26%)
Query: 82 DEVLGKGAFKTVYKAFDEFAGIEVAWSRVKID--DVLQLPGDLQKLYSEVHLLKSLKDD- 138
+++LG G+ TV F G VA R+ ID D+ + E+ LL D
Sbjct: 38 EKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDFCDIALM---------EIKLLTESDDHP 87
Query: 139 NVVKFYKSWVDDKKKTVNM------ITELFTSGNLRQYRKKHKNVDIKVIKNW-----AR 187
NV+++Y S D+ + + + +L S N+ + ++K+ K + R
Sbjct: 88 NVIRYYCSETTDRFLYIALELCNLNLQDLVESKNV-------SDENLKLQKEYNPISLLR 140
Query: 188 QILHGLVYLHSHNPPIIHRDLKCDNIFVN------------GNHGEVKIGDLGLAIAMQ- 234
QI G+ +LHS IIHRDLK NI V+ + + I D GL +
Sbjct: 141 QIASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 198
Query: 235 -QPTARSVI----GTPEFMAPELYEE----EYNELVDIYSFGMCILEMVTFEYPYSECKN 285
Q R + GT + APEL EE +DI+S G C+ F Y S+ K+
Sbjct: 199 GQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMG-CV-----FYYILSKGKH 252
Query: 286 PAQIFKKVTSGIKPASLAKVNDPQIKGFIE----KCLVPASERLSAKDLLKDPFLQVENQ 341
P G K + + + I+G KCL S A DL+ Q+ +
Sbjct: 253 PF--------GDKYSRESNI----IRGIFSLDEMKCLHDRSLIAEATDLIS----QMIDH 296
Query: 342 KEPICDPLKLPIQSLKMLRLPMSGPSSMDID 372
DPLK P ++K+LR P+ P S ++
Sbjct: 297 -----DPLKRP-TAMKVLRHPLFWPKSKKLE 321
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 139/331 (41%), Gaps = 87/331 (26%)
Query: 82 DEVLGKGAFKTVYKAFDEFAGIEVAWSRVKID--DVLQLPGDLQKLYSEVHLLKSLKDD- 138
+++LG G+ TV F G VA R+ ID D+ + E+ LL D
Sbjct: 38 EKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDFCDIALM---------EIKLLTESDDHP 87
Query: 139 NVVKFYKSWVDDKKKTVNM------ITELFTSGNLRQYRKKHKNVDIKVIKNW-----AR 187
NV+++Y S D+ + + + +L S N+ + ++K+ K + R
Sbjct: 88 NVIRYYCSETTDRFLYIALELCNLNLQDLVESKNV-------SDENLKLQKEYNPISLLR 140
Query: 188 QILHGLVYLHSHNPPIIHRDLKCDNIFVN------------GNHGEVKIGDLGLAIAMQ- 234
QI G+ +LHS IIHRDLK NI V+ + + I D GL +
Sbjct: 141 QIASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 198
Query: 235 -QPTARSVI----GTPEFMAPELYEE----EYNELVDIYSFGMCILEMVTFEYPYSECKN 285
Q R + GT + APEL EE +DI+S G C+ F Y S+ K+
Sbjct: 199 GQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMG-CV-----FYYILSKGKH 252
Query: 286 PAQIFKKVTSGIKPASLAKVNDPQIKGFIE----KCLVPASERLSAKDLLKDPFLQVENQ 341
P G K + + + I+G KCL S A DL+ Q+ +
Sbjct: 253 PF--------GDKYSRESNI----IRGIFSLDEMKCLHDRSLIAEATDLIS----QMIDH 296
Query: 342 KEPICDPLKLPIQSLKMLRLPMSGPSSMDID 372
DPLK P ++K+LR P+ P S ++
Sbjct: 297 -----DPLKRP-TAMKVLRHPLFWPKSKKLE 321
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 96/228 (42%), Gaps = 14/228 (6%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDD 138
++ ++V+G G F V + G +K + SE ++
Sbjct: 10 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 69
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNWARQILHGLVYLH 197
N++ V K K V +ITE +G+L + RK + + R I G+ YL
Sbjct: 70 NIIHL--EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS 127
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP-----TARSVIGTPEFMAPE- 251
+ +HRDL NI VN N K+ D G++ ++ T R + APE
Sbjct: 128 DMS--YVHRDLAARNILVNSNL-VCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 184
Query: 252 LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQIFKKVTSGIK 298
+ ++ D++S+G+ + E++++ E PY + N + K + G +
Sbjct: 185 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-QDVIKAIEEGYR 231
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 44/242 (18%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVK--IDDVLQLPGDLQKLYSEVHLLKSLKDDNV 140
++G+G++ VY A+D+ A VA +V +D++ D +++ E+ +L LK D +
Sbjct: 34 HLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLI----DCKRILREITILNRLKSDYI 89
Query: 141 VKFYKSWVDD---KKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLH 197
++ + + + K + ++ E+ S +L++ K + + +K +L G ++H
Sbjct: 90 IRLHDLIIPEDLLKFDELYIVLEIADS-DLKKLFKTPIFLTEQHVKTILYNLLLGEKFIH 148
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQ----------------------- 234
IIHRDLK N +N + VKI D GLA +
Sbjct: 149 ESG--IIHRDLKPANCLLNQD-CSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPH 205
Query: 235 ----QPTARSVIGTPEFMAPE--LYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQ 288
+ S + T + APE L +E Y +DI+S G E++ S NP
Sbjct: 206 NKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMM--KSHINNPTN 263
Query: 289 IF 290
F
Sbjct: 264 RF 265
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 96/228 (42%), Gaps = 14/228 (6%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDD 138
++ ++V+G G F V + G +K + SE ++
Sbjct: 16 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 75
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIKNWARQILHGLVYLH 197
N++ V K K V +ITE +G+L + RK + + R I G+ YL
Sbjct: 76 NIIHL--EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS 133
Query: 198 SHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP-----TARSVIGTPEFMAPE- 251
+ +HRDL NI VN N K+ D G++ ++ T R + APE
Sbjct: 134 DMS--YVHRDLAARNILVNSNL-VCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 190
Query: 252 LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQIFKKVTSGIK 298
+ ++ D++S+G+ + E++++ E PY + N + K + G +
Sbjct: 191 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-QDVIKAIEEGYR 237
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 101/232 (43%), Gaps = 48/232 (20%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPG------DLQKLYSEVHLLKSL- 135
+ LG G+F V + FD +G R + VLQ P D+ K+ V+++K +
Sbjct: 13 KTLGTGSFGIVCEVFDIESG-----KRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVD 67
Query: 136 ------------------------KDDNVVKFYKSWVDD--KKKTVNMITELFTSG---N 166
K++ V +KS + + + K +N+I E
Sbjct: 68 YFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKV 127
Query: 167 LRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGD 226
L+ + + +++ + +I + Q+ + ++HS I HRD+K N+ VN +K+ D
Sbjct: 128 LKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLG--ICHRDIKPQNLLVNSKDNTLKLCD 185
Query: 227 LGLAIAMQQPTARSV--IGTPEFMAPELY--EEEYNELVDIYSFGMCILEMV 274
G A + P+ SV I + + APEL EY +D++S G E++
Sbjct: 186 FGSAKKL-IPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELI 236
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDD-NVVKF 143
LG+G + V++A + +V +K P K+ E+ +L++L+ N++
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILK-------PVKKNKIKREIKILENLRGGPNIITL 97
Query: 144 YKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPI 203
D +T ++ E + + +Q + + DI+ + +IL L Y HS I
Sbjct: 98 ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF---YMYEILKALDYCHSMG--I 152
Query: 204 IHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EEEYNEL 260
+HRD+K N+ ++ H ++++ D GLA +V + + F PEL + Y+
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 261 VDIYSFGMCILEMVTFEYPY 280
+D++S G + M+ + P+
Sbjct: 213 LDMWSLGCMLASMIFRKEPF 232
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 129/279 (46%), Gaps = 23/279 (8%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYS-EVHLLKSLKDDNVV 141
E LG+G F V++ +E + + + +++ G Q L E+ +L + N++
Sbjct: 11 EDLGRGEFGIVHRC------VETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNIL 64
Query: 142 KFYKSWVDDKKKTVNMITELFTSG--NLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSH 199
++S+ + + + MI E F SG + ++ + I ++ Q+ L +LHSH
Sbjct: 65 HLHESF--ESMEELVMIFE-FISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH 121
Query: 200 NPPIIHRDLKCDNIFVNGNHGE-VKIGDLGLAIAMQ-QPTARSVIGTPEFMAPELYEEE- 256
N I H D++ +NI +KI + G A ++ R + PE+ APE+++ +
Sbjct: 122 N--IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDV 179
Query: 257 YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKG--FI 314
+ D++S G + +++ P+ N QI + + + + I+ F+
Sbjct: 180 VSTATDMWSLGTLVYVLLSGINPFLAETNQ-QIIENIMNAEYTFDEEAFKEISIEAMDFV 238
Query: 315 EKCLVPASE-RLSAKDLLKDPFL--QVENQKEPICDPLK 350
++ LV + R++A + L+ P+L ++E + LK
Sbjct: 239 DRLLVKERKSRMTASEALQHPWLKQKIERVSTKVIRTLK 277
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 133/304 (43%), Gaps = 51/304 (16%)
Query: 75 SGR----YVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQ-KLYSEV 129
SGR Y ++VLG+GA V + E A VKI + + PG ++ +++ EV
Sbjct: 7 SGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYA---VKI--IEKQPGHIRSRVFREV 61
Query: 130 HLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQI 189
+L + V + +++ + ++ E G++ + K ++ + + +
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDR-FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDV 120
Query: 190 LHGLVYLHSHNPPIIHRDLKCDNIFVN--GNHGEVKIGDLGLAIAMQ---------QPTA 238
L +LH N I HRDLK +NI VKI D L ++ P
Sbjct: 121 ASALDFLH--NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPEL 178
Query: 239 RSVIGTPEFMAPELYE---EE---YNELVDIYSFGMCILEMVTFEYP------YSEC--- 283
+ G+ E+MAPE+ E EE Y++ D++S G+ IL ++ YP S+C
Sbjct: 179 LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGV-ILYILLSGYPPFVGRCGSDCGWD 237
Query: 284 ---KNPA---QIFKKVTSG---IKPASLAKVNDPQIKGFIEKCLVP-ASERLSAKDLLKD 333
PA +F+ + G A ++ K I K LV A +RLSA +L+
Sbjct: 238 RGEACPACQNMLFESIQEGKYEFPDKDWAHIS-CAAKDLISKLLVRDAKQRLSAAQVLQH 296
Query: 334 PFLQ 337
P++Q
Sbjct: 297 PWVQ 300
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 30/229 (13%)
Query: 72 KDPSGRYVRYDEVLGKGAFKTVYKA--FDEFAGIEVAWSRVK-IDDVLQLPGDLQKLYSE 128
K+ S VR+ E LG+ F VYK F G + +K + D + P ++ E
Sbjct: 21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR-EEFRHE 79
Query: 129 VHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY---RKKHKNV----DIKV 181
L L+ NVV V K + ++MI + G+L ++ R H +V D +
Sbjct: 80 AMLRARLQHPNVVCLLG--VVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 137
Query: 182 IK---------NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA 232
+K + QI G+ YL SH+ ++H+DL N+ V + VKI DLGL
Sbjct: 138 VKSALEPPDFVHLVAQIAAGMEYLSSHH--VVHKDLATRNVLVY-DKLNVKISDLGLFRE 194
Query: 233 MQQPTARSVIGTP----EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 276
+ ++G +MAPE + +++ DI+S+G+ + E+ ++
Sbjct: 195 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSY 243
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 30/229 (13%)
Query: 72 KDPSGRYVRYDEVLGKGAFKTVYKA--FDEFAGIEVAWSRVK-IDDVLQLPGDLQKLYSE 128
K+ S VR+ E LG+ F VYK F G + +K + D + P ++ E
Sbjct: 4 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR-EEFRHE 62
Query: 129 VHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY---RKKHKNV----DIKV 181
L L+ NVV V K + ++MI + G+L ++ R H +V D +
Sbjct: 63 AMLRARLQHPNVVCLLG--VVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120
Query: 182 IK---------NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIA 232
+K + QI G+ YL SH+ ++H+DL N+ V + VKI DLGL
Sbjct: 121 VKSALEPPDFVHLVAQIAAGMEYLSSHH--VVHKDLATRNVLVY-DKLNVKISDLGLFRE 177
Query: 233 MQQPTARSVIGTP----EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF 276
+ ++G +MAPE + +++ DI+S+G+ + E+ ++
Sbjct: 178 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSY 226
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 104/232 (44%), Gaps = 20/232 (8%)
Query: 73 DPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLL 132
DPS + + + +G G F V+ G + +V I + + + E ++
Sbjct: 6 DPSE--LTFVQEIGSGQFGLVH------LGYWLNKDKVAIKTIREGAMSEEDFIEEAEVM 57
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV-DIKVIKNWARQILH 191
L +V+ Y V ++ + ++TE G L Y + + + + + +
Sbjct: 58 MKLSHPKLVQLYG--VCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 115
Query: 192 GLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP---EFM 248
G+ YL +IHRDL N V G + +K+ D G+ + S GT ++
Sbjct: 116 GMAYLE--EACVIHRDLAARNCLV-GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA 172
Query: 249 APELYE-EEYNELVDIYSFGMCILEMVT-FEYPYSECKNPAQIFKKVTSGIK 298
+PE++ Y+ D++SFG+ + E+ + + PY E ++ +++ + +++G +
Sbjct: 173 SPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY-ENRSNSEVVEDISTGFR 223
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 102/231 (44%), Gaps = 26/231 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLP-----GDLQKLYSEVHLLKSLKDDN 139
LG GAF VY+ + +G+ S +++ V LP D E ++ L N
Sbjct: 39 LGHGAFGEVYEG--QVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKLNHQN 95
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-------NVDIKVIKNWARQILHG 192
+V+ + + + + EL G+L+ + ++ + ++ + + + AR I G
Sbjct: 96 IVRCIGVSLQSLPRFI--LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVN--GNHGEVKIGDLGLAIAMQQPTARSVIGTP----E 246
YL ++ IHRD+ N + G KIGD G+A + + + G +
Sbjct: 154 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 211
Query: 247 FMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+M PE + E + D +SFG+ + E+ + Y K+ ++ + VTSG
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 262
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 102/231 (44%), Gaps = 26/231 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLP-----GDLQKLYSEVHLLKSLKDDN 139
LG GAF VY+ + +G+ S +++ V LP D E ++ L N
Sbjct: 53 LGHGAFGEVYEG--QVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKLNHQN 109
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-------NVDIKVIKNWARQILHG 192
+V+ + + + + EL G+L+ + ++ + ++ + + + AR I G
Sbjct: 110 IVRCIGVSLQSLPRFI--LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVN--GNHGEVKIGDLGLAIAMQQPTARSVIGTP----E 246
YL ++ IHRD+ N + G KIGD G+A + + + G +
Sbjct: 168 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 247 FMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+M PE + E + D +SFG+ + E+ + Y K+ ++ + VTSG
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 276
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 23/198 (11%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEV-HLLKSLKDDNVV 141
+VLG G V + F G + A L+L D K EV H ++ ++V
Sbjct: 35 QVLGLGVNGKVLECFHRRTGQKCA---------LKLLYDSPKARQEVDHHWQASGGPHIV 85
Query: 142 KFYKSW--VDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILH----GLVY 195
+ + K+ + +I E G L + + + D + A +I+ + +
Sbjct: 86 CILDVYENMHHGKRCLLIIMECMEGGEL--FSRIQERGDQAFTEREAAEIMRDIGTAIQF 143
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGE--VKIGDLGLAIAMQQPTARSVIGTPEFMAPE-L 252
LHSHN I HRD+K +N+ + +K+ D G A Q ++ TP ++APE L
Sbjct: 144 LHSHN--IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVL 201
Query: 253 YEEEYNELVDIYSFGMCI 270
E+Y++ D++S G+ +
Sbjct: 202 GPEKYDKSCDMWSLGVIM 219
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 23/198 (11%)
Query: 83 EVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEV-HLLKSLKDDNVV 141
+VLG G V + F G + A L+L D K EV H ++ ++V
Sbjct: 16 QVLGLGVNGKVLECFHRRTGQKCA---------LKLLYDSPKARQEVDHHWQASGGPHIV 66
Query: 142 KFYKSW--VDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILH----GLVY 195
+ + K+ + +I E G L + + + D + A +I+ + +
Sbjct: 67 CILDVYENMHHGKRCLLIIMECMEGGEL--FSRIQERGDQAFTEREAAEIMRDIGTAIQF 124
Query: 196 LHSHNPPIIHRDLKCDNIFVNGNHGE--VKIGDLGLAIAMQQPTARSVIGTPEFMAPE-L 252
LHSHN I HRD+K +N+ + +K+ D G A Q ++ TP ++APE L
Sbjct: 125 LHSHN--IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVL 182
Query: 253 YEEEYNELVDIYSFGMCI 270
E+Y++ D++S G+ +
Sbjct: 183 GPEKYDKSCDMWSLGVIM 200
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 43/214 (20%)
Query: 150 DKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK-NWARQI------LHGLVYLHSHNPP 202
D++ + +I + +GNL+++ D+ + +W +++ GL YLH+
Sbjct: 105 DERNEMILIYKYMENGNLKRHLY---GSDLPTMSMSWEQRLEICIGAARGLHYLHTR--A 159
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLA---IAMQQPTARSVI-GTPEFMAPELY-EEEY 257
IIHRD+K NI ++ N KI D G++ + Q V+ GT ++ PE + +
Sbjct: 160 IIHRDVKSINILLDENFVP-KITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRL 218
Query: 258 NELVDIYSFGMCIL---------------EMVTFEYPYSECKNPAQIFKKV----TSGIK 298
E D+YSFG+ + EMV E N Q+ + V I+
Sbjct: 219 TEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIR 278
Query: 299 PASLAKVNDPQIKGFIEKCLVPASE-RLSAKDLL 331
P SL K D + KCL +SE R S D+L
Sbjct: 279 PESLRKFGDTAV-----KCLALSSEDRPSMGDVL 307
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 101/231 (43%), Gaps = 26/231 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLP-----GDLQKLYSEVHLLKSLKDDN 139
LG GAF VY+ + +G+ S +++ V LP D E ++ N
Sbjct: 53 LGHGAFGEVYEG--QVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFNHQN 109
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-------NVDIKVIKNWARQILHG 192
+V+ + + + M EL G+L+ + ++ + ++ + + + AR I G
Sbjct: 110 IVRCIGVSLQSLPRFILM--ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVN--GNHGEVKIGDLGLAIAMQQPTARSVIGTP----E 246
YL ++ IHRD+ N + G KIGD G+A + + + G +
Sbjct: 168 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 247 FMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+M PE + E + D +SFG+ + E+ + Y K+ ++ + VTSG
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 276
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 101/231 (43%), Gaps = 26/231 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLP-----GDLQKLYSEVHLLKSLKDDN 139
LG GAF VY+ + +G+ S +++ V LP D E ++ N
Sbjct: 38 LGHGAFGEVYEG--QVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFNHQN 94
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-------NVDIKVIKNWARQILHG 192
+V+ + + + M EL G+L+ + ++ + ++ + + + AR I G
Sbjct: 95 IVRCIGVSLQSLPRFILM--ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 152
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVN--GNHGEVKIGDLGLAIAMQQPTARSVIGTP----E 246
YL ++ IHRD+ N + G KIGD G+A + + + G +
Sbjct: 153 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 210
Query: 247 FMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+M PE + E + D +SFG+ + E+ + Y K+ ++ + VTSG
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 261
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 43/214 (20%)
Query: 150 DKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIK-NWARQI------LHGLVYLHSHNPP 202
D++ + +I + +GNL+++ D+ + +W +++ GL YLH+
Sbjct: 105 DERNEMILIYKYMENGNLKRHLY---GSDLPTMSMSWEQRLEICIGAARGLHYLHTR--A 159
Query: 203 IIHRDLKCDNIFVNGNHGEVKIGDLGLA---IAMQQPTARSVI-GTPEFMAPELY-EEEY 257
IIHRD+K NI ++ N KI D G++ + Q V+ GT ++ PE + +
Sbjct: 160 IIHRDVKSINILLDENFVP-KITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRL 218
Query: 258 NELVDIYSFGMCIL---------------EMVTFEYPYSECKNPAQIFKKV----TSGIK 298
E D+YSFG+ + EMV E N Q+ + V I+
Sbjct: 219 TEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIR 278
Query: 299 PASLAKVNDPQIKGFIEKCLVPASE-RLSAKDLL 331
P SL K D + KCL +SE R S D+L
Sbjct: 279 PESLRKFGDTAV-----KCLALSSEDRPSMGDVL 307
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 101/231 (43%), Gaps = 26/231 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLP-----GDLQKLYSEVHLLKSLKDDN 139
LG GAF VY+ + +G+ S +++ V LP D E ++ N
Sbjct: 39 LGHGAFGEVYEG--QVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFNHQN 95
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-------NVDIKVIKNWARQILHG 192
+V+ + + + + EL G+L+ + ++ + ++ + + + AR I G
Sbjct: 96 IVRCIGVSLQSLPRFI--LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVN--GNHGEVKIGDLGLAIAMQQPTARSVIGTP----E 246
YL ++ IHRD+ N + G KIGD G+A + + + G +
Sbjct: 154 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 211
Query: 247 FMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+M PE + E + D +SFG+ + E+ + Y K+ ++ + VTSG
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 262
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 101/231 (43%), Gaps = 26/231 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLP-----GDLQKLYSEVHLLKSLKDDN 139
LG GAF VY+ + +G+ S +++ V LP D E ++ N
Sbjct: 30 LGHGAFGEVYEG--QVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFNHQN 86
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-------NVDIKVIKNWARQILHG 192
+V+ + + + + EL G+L+ + ++ + ++ + + + AR I G
Sbjct: 87 IVRCIGVSLQSLPRFI--LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 144
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVN--GNHGEVKIGDLGLAIAMQQPTARSVIGTP----E 246
YL ++ IHRD+ N + G KIGD G+A + + + G +
Sbjct: 145 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 202
Query: 247 FMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+M PE + E + D +SFG+ + E+ + Y K+ ++ + VTSG
Sbjct: 203 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 253
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 101/231 (43%), Gaps = 26/231 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLP-----GDLQKLYSEVHLLKSLKDDN 139
LG GAF VY+ + +G+ S +++ V LP D E ++ N
Sbjct: 39 LGHGAFGEVYEG--QVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFNHQN 95
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-------NVDIKVIKNWARQILHG 192
+V+ + + + + EL G+L+ + ++ + ++ + + + AR I G
Sbjct: 96 IVRCIGVSLQSLPRFI--LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVN--GNHGEVKIGDLGLAIAMQQPTARSVIGTP----E 246
YL ++ IHRD+ N + G KIGD G+A + + + G +
Sbjct: 154 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVK 211
Query: 247 FMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+M PE + E + D +SFG+ + E+ + Y K+ ++ + VTSG
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 262
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 101/231 (43%), Gaps = 26/231 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLP-----GDLQKLYSEVHLLKSLKDDN 139
LG GAF VY+ + +G+ S +++ V LP D E ++ N
Sbjct: 53 LGHGAFGEVYEG--QVSGMPNDPSPLQVA-VKTLPEVYSEQDELDFLMEALIISKFNHQN 109
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-------NVDIKVIKNWARQILHG 192
+V+ + + + + EL G+L+ + ++ + ++ + + + AR I G
Sbjct: 110 IVRCIGVSLQSLPRFI--LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVN--GNHGEVKIGDLGLAIAMQQPTARSVIGTP----E 246
YL ++ IHRD+ N + G KIGD G+A + + + G +
Sbjct: 168 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 247 FMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+M PE + E + D +SFG+ + E+ + Y K+ ++ + VTSG
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 276
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 101/231 (43%), Gaps = 26/231 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLP-----GDLQKLYSEVHLLKSLKDDN 139
LG GAF VY+ + +G+ S +++ V LP D E ++ N
Sbjct: 38 LGHGAFGEVYEG--QVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFNHQN 94
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-------NVDIKVIKNWARQILHG 192
+V+ + + + + EL G+L+ + ++ + ++ + + + AR I G
Sbjct: 95 IVRCIGVSLQSLPRFI--LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 152
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVN--GNHGEVKIGDLGLAIAMQQPTARSVIGTP----E 246
YL ++ IHRD+ N + G KIGD G+A + + + G +
Sbjct: 153 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 210
Query: 247 FMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+M PE + E + D +SFG+ + E+ + Y K+ ++ + VTSG
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 261
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 101/231 (43%), Gaps = 26/231 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLP-----GDLQKLYSEVHLLKSLKDDN 139
LG GAF VY+ + +G+ S +++ V LP D E ++ N
Sbjct: 55 LGHGAFGEVYEG--QVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFNHQN 111
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-------NVDIKVIKNWARQILHG 192
+V+ + + + + EL G+L+ + ++ + ++ + + + AR I G
Sbjct: 112 IVRCIGVSLQSLPRFI--LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 169
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVN--GNHGEVKIGDLGLAIAMQQPTARSVIGTP----E 246
YL ++ IHRD+ N + G KIGD G+A + + + G +
Sbjct: 170 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 227
Query: 247 FMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+M PE + E + D +SFG+ + E+ + Y K+ ++ + VTSG
Sbjct: 228 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 278
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 101/231 (43%), Gaps = 26/231 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLP-----GDLQKLYSEVHLLKSLKDDN 139
LG GAF VY+ + +G+ S +++ V LP D E ++ N
Sbjct: 45 LGHGAFGEVYEG--QVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFNHQN 101
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-------NVDIKVIKNWARQILHG 192
+V+ + + + + EL G+L+ + ++ + ++ + + + AR I G
Sbjct: 102 IVRCIGVSLQSLPRFI--LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 159
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVN--GNHGEVKIGDLGLAIAMQQPTARSVIGTP----E 246
YL ++ IHRD+ N + G KIGD G+A + + + G +
Sbjct: 160 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 217
Query: 247 FMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+M PE + E + D +SFG+ + E+ + Y K+ ++ + VTSG
Sbjct: 218 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 268
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 153 KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 212
+T ++ E + + +Q R+ + DI+ + +IL L Y HS I+HRD+K N
Sbjct: 107 RTPALVFEHVNNTDFKQLRQTLTDYDIRF---YMYEILKALDYCHSMG--IMHRDVKPHN 161
Query: 213 IFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EEEYNELVDIYSFGMC 269
+ ++ H ++++ D GLA +V + + F PEL + Y+ +D++S G
Sbjct: 162 VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM 221
Query: 270 ILEMVTFEYPY 280
+ M+ + P+
Sbjct: 222 LASMIFRKEPF 232
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 103/232 (44%), Gaps = 20/232 (8%)
Query: 73 DPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLL 132
DPS + + + +G G F V+ G + +V I + + + E ++
Sbjct: 5 DPSE--LTFVQEIGSGQFGLVH------LGYWLNKDKVAIKTIREGAMSEEDFIEEAEVM 56
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV-DIKVIKNWARQILH 191
L +V+ Y V ++ + ++ E G L Y + + + + + +
Sbjct: 57 MKLSHPKLVQLYG--VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 114
Query: 192 GLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP---EFM 248
G+ YL +IHRDL N V G + +K+ D G+ + S GT ++
Sbjct: 115 GMAYLE--EASVIHRDLAARNCLV-GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA 171
Query: 249 APELYE-EEYNELVDIYSFGMCILEMVT-FEYPYSECKNPAQIFKKVTSGIK 298
+PE++ Y+ D++SFG+ + E+ + + PY E ++ +++ + +++G +
Sbjct: 172 SPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY-ENRSNSEVVEDISTGFR 222
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 101/231 (43%), Gaps = 26/231 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLP-----GDLQKLYSEVHLLKSLKDDN 139
LG GAF VY+ + +G+ S +++ V LP D E ++ N
Sbjct: 65 LGHGAFGEVYEG--QVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFNHQN 121
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-------NVDIKVIKNWARQILHG 192
+V+ + + + + EL G+L+ + ++ + ++ + + + AR I G
Sbjct: 122 IVRCIGVSLQSLPRFI--LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 179
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVN--GNHGEVKIGDLGLAIAMQQPTARSVIGTP----E 246
YL ++ IHRD+ N + G KIGD G+A + + + G +
Sbjct: 180 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 237
Query: 247 FMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+M PE + E + D +SFG+ + E+ + Y K+ ++ + VTSG
Sbjct: 238 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 288
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 100/231 (43%), Gaps = 26/231 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLP-----GDLQKLYSEVHLLKSLKDDN 139
LG GAF VY+ + +G+ S +++ V LP D E ++ N
Sbjct: 79 LGHGAFGEVYEG--QVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFNHQN 135
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-------NVDIKVIKNWARQILHG 192
+V+ + + + + EL G+L+ + ++ + ++ + + + AR I G
Sbjct: 136 IVRCIGVSLQSLPRFI--LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 193
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVN--GNHGEVKIGDLGLAIAMQQPTARSVIGTP----E 246
YL ++ IHRD+ N + G KIGD G+A + + G +
Sbjct: 194 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 251
Query: 247 FMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+M PE + E + D +SFG+ + E+ + Y K+ ++ + VTSG
Sbjct: 252 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 302
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 103/232 (44%), Gaps = 20/232 (8%)
Query: 73 DPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLL 132
DPS + + + +G G F V+ G + +V I + + + E ++
Sbjct: 5 DPSE--LTFVQEIGSGQFGLVH------LGYWLNKDKVAIKTIREGAMSEEDFIEEAEVM 56
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV-DIKVIKNWARQILH 191
L +V+ Y V ++ + ++ E G L Y + + + + + +
Sbjct: 57 MKLSHPKLVQLYG--VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 114
Query: 192 GLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP---EFM 248
G+ YL +IHRDL N V G + +K+ D G+ + S GT ++
Sbjct: 115 GMAYLE--EACVIHRDLAARNCLV-GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA 171
Query: 249 APELYE-EEYNELVDIYSFGMCILEMVT-FEYPYSECKNPAQIFKKVTSGIK 298
+PE++ Y+ D++SFG+ + E+ + + PY E ++ +++ + +++G +
Sbjct: 172 SPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY-ENRSNSEVVEDISTGFR 222
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 103/232 (44%), Gaps = 20/232 (8%)
Query: 73 DPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLL 132
DPS + + + +G G F V+ G + +V I + + + E ++
Sbjct: 3 DPSE--LTFVQEIGSGQFGLVH------LGYWLNKDKVAIKTIREGAMSEEDFIEEAEVM 54
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV-DIKVIKNWARQILH 191
L +V+ Y V ++ + ++ E G L Y + + + + + +
Sbjct: 55 MKLSHPKLVQLYG--VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 112
Query: 192 GLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP---EFM 248
G+ YL +IHRDL N V G + +K+ D G+ + S GT ++
Sbjct: 113 GMAYLE--EACVIHRDLAARNCLV-GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA 169
Query: 249 APELYE-EEYNELVDIYSFGMCILEMVT-FEYPYSECKNPAQIFKKVTSGIK 298
+PE++ Y+ D++SFG+ + E+ + + PY E ++ +++ + +++G +
Sbjct: 170 SPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY-ENRSNSEVVEDISTGFR 220
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 102/232 (43%), Gaps = 20/232 (8%)
Query: 73 DPSGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLL 132
DPS + + + +G G F V+ G + +V I + + + E ++
Sbjct: 8 DPSE--LTFVQEIGSGQFGLVH------LGYWLNKDKVAIKTIREGAMSEEDFIEEAEVM 59
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV-DIKVIKNWARQILH 191
L +V+ Y V ++ + ++ E G L Y + + + + + +
Sbjct: 60 MKLSHPKLVQLYG--VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 117
Query: 192 GLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP---EFM 248
G+ YL +IHRDL N V N +K+ D G+ + S GT ++
Sbjct: 118 GMAYLE--EACVIHRDLAARNCLVGENQ-VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA 174
Query: 249 APELYE-EEYNELVDIYSFGMCILEMVT-FEYPYSECKNPAQIFKKVTSGIK 298
+PE++ Y+ D++SFG+ + E+ + + PY E ++ +++ + +++G +
Sbjct: 175 SPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY-ENRSNSEVVEDISTGFR 225
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 100/231 (43%), Gaps = 26/231 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLP-----GDLQKLYSEVHLLKSLKDDN 139
LG GAF VY+ + +G+ S +++ V LP D E ++ N
Sbjct: 56 LGHGAFGEVYEG--QVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFNHQN 112
Query: 140 VVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHK-------NVDIKVIKNWARQILHG 192
+V+ + + + + EL G+L+ + ++ + ++ + + + AR I G
Sbjct: 113 IVRCIGVSLQSLPRFI--LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 170
Query: 193 LVYLHSHNPPIIHRDLKCDNIFVN--GNHGEVKIGDLGLAIAMQQPTARSVIGTP----E 246
YL ++ IHRD+ N + G KIGD G+A + + G +
Sbjct: 171 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 228
Query: 247 FMAPELYEEE-YNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSG 296
+M PE + E + D +SFG+ + E+ + Y K+ ++ + VTSG
Sbjct: 229 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 279
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 8/145 (5%)
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 198
N++K + D KT ++ E + + +Q + + DI+ + ++L L Y HS
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFDIRF---YMYELLKALDYCHS 150
Query: 199 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EE 255
I+HRD+K N+ ++ ++++ D GLA +V + + F PEL +
Sbjct: 151 KG--IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQ 208
Query: 256 EYNELVDIYSFGMCILEMVTFEYPY 280
Y+ +D++S G + M+ P+
Sbjct: 209 MYDYSLDMWSLGCMLASMIFRREPF 233
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 8/145 (5%)
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 198
N++K + D KT ++ E + + +Q + + DI+ + ++L L Y HS
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFDIRF---YMYELLKALDYCHS 155
Query: 199 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EE 255
I+HRD+K N+ ++ ++++ D GLA +V + + F PEL +
Sbjct: 156 KG--IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQ 213
Query: 256 EYNELVDIYSFGMCILEMVTFEYPY 280
Y+ +D++S G + M+ P+
Sbjct: 214 MYDYSLDMWSLGCMLASMIFRREPF 238
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 82/177 (46%), Gaps = 12/177 (6%)
Query: 128 EVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNV-DIKVIKNWA 186
E ++ L +V+ Y V ++ + ++ E G L Y + + + + +
Sbjct: 72 EAEVMMKLSHPKLVQLYG--VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMC 129
Query: 187 RQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIGTP- 245
+ G+ YL +IHRDL N V N +K+ D G+ + S GT
Sbjct: 130 LDVCEGMAYLE--EACVIHRDLAARNCLVGENQ-VIKVSDFGMTRFVLDDQYTSSTGTKF 186
Query: 246 --EFMAPELYE-EEYNELVDIYSFGMCILEMVT-FEYPYSECKNPAQIFKKVTSGIK 298
++ +PE++ Y+ D++SFG+ + E+ + + PY E ++ +++ + +++G +
Sbjct: 187 PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY-ENRSNSEVVEDISTGFR 242
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 127/297 (42%), Gaps = 48/297 (16%)
Query: 74 PSGRYVRY-DEVLGKGAFKTVYKAFDEFAGIEVAWSRV--------KIDDVLQLPGDLQK 124
P R V + D V+GKG F VY E+ I+ A +R+ +I ++ Q+ L+
Sbjct: 17 PHERVVTHSDRVIGKGHFGVVYHG--EY--IDQAQNRIQCAIKSLSRITEMQQVEAFLR- 71
Query: 125 LYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQY-RKKHKNVDIKVIK 183
E L++ L NV+ + + +++ G+L Q+ R +N +K +
Sbjct: 72 ---EGLLMRGLNHPNVLALIGIML-PPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLI 127
Query: 184 NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA---------IAMQ 234
++ Q+ G+ YL +HRDL N ++ + VK+ D GLA Q
Sbjct: 128 SFGLQVARGMEYLAEQK--FVHRDLAARNCMLDESF-TVKVADFGLARDILDREYYSVQQ 184
Query: 235 QPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVT 294
AR + + + Y + D++SFG+ + E++T P +P + +
Sbjct: 185 HRHARLPVKWTALESLQTY--RFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLA 242
Query: 295 SGIK-------PASLAKV------NDPQIKGFIEKCLVPASERLSAKDLLKDPFLQV 338
G + P SL +V DP ++ + LV E++ + LL D ++Q+
Sbjct: 243 QGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTF-RVLVGEVEQIVSA-LLGDHYVQL 297
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 149 DDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDL 208
D +T ++ E + + +Q + + DI+ + +IL L Y HS I+HRD+
Sbjct: 103 DPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF---YMYEILKALDYCHSMG--IMHRDV 157
Query: 209 KCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EEEYNELVDIYS 265
K N+ ++ H ++++ D GLA +V + + F PEL + Y+ +D++S
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 217
Query: 266 FGMCILEMVTFEYPY 280
G + M+ + P+
Sbjct: 218 LGCMLASMIFRKEPF 232
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 109/245 (44%), Gaps = 37/245 (15%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGI--EVAWSRVK----IDDVLQLPGDLQKLYSEVHLL 132
+++ +V+G+G F V KA + G+ + A R+K DD G+L+ L H
Sbjct: 27 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH-- 84
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIK---VIKNW---- 185
N++ + + + + + E GNL + +K + ++ I N
Sbjct: 85 ----HPNIINLLGAC--EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 138
Query: 186 --ARQILH-------GLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP 236
++Q+LH G+ YL IHRDL NI V N+ KI D GL+ +
Sbjct: 139 LSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGENY-VAKIADFGLSRGQEVY 195
Query: 237 TARSVIGTP-EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQIFKKV 293
+++ P +MA E L Y D++S+G+ + E+V+ PY A++++K+
Sbjct: 196 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG-MTCAELYEKL 254
Query: 294 TSGIK 298
G +
Sbjct: 255 PQGYR 259
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 109/245 (44%), Gaps = 37/245 (15%)
Query: 79 VRYDEVLGKGAFKTVYKAFDEFAGI--EVAWSRVK----IDDVLQLPGDLQKLYSEVHLL 132
+++ +V+G+G F V KA + G+ + A R+K DD G+L+ L H
Sbjct: 17 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH-- 74
Query: 133 KSLKDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIK---VIKNW---- 185
N++ + + + + + E GNL + +K + ++ I N
Sbjct: 75 ----HPNIINLLGAC--EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 128
Query: 186 --ARQILH-------GLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP 236
++Q+LH G+ YL IHRDL NI V N+ KI D GL+ +
Sbjct: 129 LSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGENY-VAKIADFGLSRGQEVY 185
Query: 237 TARSVIGTP-EFMAPE-LYEEEYNELVDIYSFGMCILEMVTF-EYPYSECKNPAQIFKKV 293
+++ P +MA E L Y D++S+G+ + E+V+ PY A++++K+
Sbjct: 186 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG-MTCAELYEKL 244
Query: 294 TSGIK 298
G +
Sbjct: 245 PQGYR 249
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 149 DDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDL 208
D +T ++ E + + +Q + + DI+ + +IL L Y HS I+HRD+
Sbjct: 108 DPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF---YMYEILKALDYCHSMG--IMHRDV 162
Query: 209 KCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EEEYNELVDIYS 265
K N+ ++ H ++++ D GLA +V + + F PEL + Y+ +D++S
Sbjct: 163 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 222
Query: 266 FGMCILEMVTFEYPY 280
G + M+ + P+
Sbjct: 223 LGCMLASMIFRKEPF 237
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 153 KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 212
+T ++ E + + +Q + + DI+ + +IL L Y HS I+HRD+K N
Sbjct: 107 RTPALVFEHVNNTDFKQLYQTLTDYDIRF---YMYEILKALDYCHSMG--IMHRDVKPHN 161
Query: 213 IFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EEEYNELVDIYSFGMC 269
+ ++ H ++++ D GLA +V + + F PEL + Y+ +D++S G
Sbjct: 162 VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM 221
Query: 270 ILEMVTFEYPY 280
+ M+ + P+
Sbjct: 222 LASMIFRKEPF 232
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 153 KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 212
+T ++ E + + +Q + + DI+ + +IL L Y HS I+HRD+K N
Sbjct: 106 RTPALVFEHVNNTDFKQLYQTLTDYDIRF---YMYEILKALDYCHSMG--IMHRDVKPHN 160
Query: 213 IFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EEEYNELVDIYSFGMC 269
+ ++ H ++++ D GLA +V + + F PEL + Y+ +D++S G
Sbjct: 161 VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM 220
Query: 270 ILEMVTFEYPY 280
+ M+ + P+
Sbjct: 221 LASMIFRKEPF 231
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 153 KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 212
+T ++ E + + +Q + + DI+ + +IL L Y HS I+HRD+K N
Sbjct: 107 RTPALVFEHVNNTDFKQLYQTLTDYDIRF---YMYEILKALDYCHSMG--IMHRDVKPHN 161
Query: 213 IFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EEEYNELVDIYSFGMC 269
+ ++ H ++++ D GLA +V + + F PEL + Y+ +D++S G
Sbjct: 162 VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM 221
Query: 270 ILEMVTFEYPY 280
+ M+ + P+
Sbjct: 222 LASMIFRKEPF 232
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 153 KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 212
+T ++ E + + +Q + + DI+ + +IL L Y HS I+HRD+K N
Sbjct: 107 RTPALVFEHVNNTDFKQLYQTLTDYDIRF---YMYEILKALDYCHSMG--IMHRDVKPHN 161
Query: 213 IFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EEEYNELVDIYSFGMC 269
+ ++ H ++++ D GLA +V + + F PEL + Y+ +D++S G
Sbjct: 162 VLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM 221
Query: 270 ILEMVTFEYPY 280
+ M+ + P+
Sbjct: 222 LASMIFRKEPF 232
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 153 KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 212
+T ++ E + + +Q + + DI+ + +IL L Y HS I+HRD+K N
Sbjct: 107 RTPALVFEHVNNTDFKQLYQTLTDYDIRF---YMYEILKALDYCHSMG--IMHRDVKPHN 161
Query: 213 IFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EEEYNELVDIYSFGMC 269
+ ++ H ++++ D GLA +V + + F PEL + Y+ +D++S G
Sbjct: 162 VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM 221
Query: 270 ILEMVTFEYPY 280
+ M+ + P+
Sbjct: 222 LASMIFRKEPF 232
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 153 KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 212
+T ++ E + + +Q + + DI+ + +IL L Y HS I+HRD+K N
Sbjct: 107 RTPALVFEHVNNTDFKQLYQTLTDYDIRF---YMYEILKALDYCHSMG--IMHRDVKPHN 161
Query: 213 IFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EEEYNELVDIYSFGMC 269
+ ++ H ++++ D GLA +V + + F PEL + Y+ +D++S G
Sbjct: 162 VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM 221
Query: 270 ILEMVTFEYPY 280
+ M+ + P+
Sbjct: 222 LASMIFRKEPF 232
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 153 KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 212
+T ++ E + + +Q + + DI+ + +IL L Y HS I+HRD+K N
Sbjct: 107 RTPALVFEHVNNTDFKQLYQTLTDYDIRF---YMYEILKALDYCHSMG--IMHRDVKPHN 161
Query: 213 IFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EEEYNELVDIYSFGMC 269
+ ++ H ++++ D GLA +V + + F PEL + Y+ +D++S G
Sbjct: 162 VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM 221
Query: 270 ILEMVTFEYPY 280
+ M+ + P+
Sbjct: 222 LASMIFRKEPF 232
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 153 KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 212
+T ++ E + + +Q + + DI+ + +IL L Y HS I+HRD+K N
Sbjct: 106 RTPALVFEHVNNTDFKQLYQTLTDYDIRF---YMYEILKALDYCHSMG--IMHRDVKPHN 160
Query: 213 IFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EEEYNELVDIYSFGMC 269
+ ++ H ++++ D GLA +V + + F PEL + Y+ +D++S G
Sbjct: 161 VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM 220
Query: 270 ILEMVTFEYPY 280
+ M+ + P+
Sbjct: 221 LASMIFRKEPF 231
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 25/213 (11%)
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 198
N+VK D KT ++I E + + + + DI+ + ++L L Y HS
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY---YIYELLKALDYCHS 164
Query: 199 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELYE--E 255
I+HRD+K N+ ++ ++++ D GLA +V + + F PEL +
Sbjct: 165 QG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 222
Query: 256 EYNELVDIYSFGMCILEMV----TFEYPYSECKNPAQIFKKVTSGIKPASLAKVN---DP 308
+Y+ +D++S G M+ F Y + +I K + + A L K DP
Sbjct: 223 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIELDP 282
Query: 309 QIKGFIEKCLVPASERLSAKDLLKDPFLQVENQ 341
Q++ + R S K LK F+ +NQ
Sbjct: 283 QLEALV--------GRHSRKPWLK--FMNADNQ 305
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 153 KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 212
+T ++ E + + +Q + + DI+ + +IL L Y HS I+HRD+K N
Sbjct: 107 RTPALVFEHVNNTDFKQLYQTLTDYDIRF---YMYEILKALDYCHSMG--IMHRDVKPHN 161
Query: 213 IFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EEEYNELVDIYSFGMC 269
+ ++ H ++++ D GLA +V + + F PEL + Y+ +D++S G
Sbjct: 162 VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM 221
Query: 270 ILEMVTFEYPY 280
+ M+ + P+
Sbjct: 222 LASMIFRKEPF 232
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 153 KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 212
+T ++ E + + +Q + + DI+ + +IL L Y HS I+HRD+K N
Sbjct: 105 RTPALVFEHVNNTDFKQLYQTLTDYDIRF---YMYEILKALDYCHSMG--IMHRDVKPHN 159
Query: 213 IFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EEEYNELVDIYSFGMC 269
+ ++ H ++++ D GLA +V + + F PEL + Y+ +D++S G
Sbjct: 160 VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM 219
Query: 270 ILEMVTFEYPY 280
+ M+ + P+
Sbjct: 220 LASMIFRKEPF 230
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 153 KTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDN 212
+T ++ E + + +Q + + DI+ + +IL L Y HS I+HRD+K N
Sbjct: 107 RTPALVFEHVNNTDFKQLYQTLTDYDIRF---YMYEILKALDYCHSMG--IMHRDVKPHN 161
Query: 213 IFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELY--EEEYNELVDIYSFGMC 269
+ ++ H ++++ D GLA +V + + F PEL + Y+ +D++S G
Sbjct: 162 VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM 221
Query: 270 ILEMVTFEYPY 280
+ M+ + P+
Sbjct: 222 LASMIFRKEPF 232
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 72/169 (42%), Gaps = 11/169 (6%)
Query: 156 NMITELFTSGNLRQYRKKHKN--VDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNI 213
+IT G+L + N VD +A + G+ +LH+ P I L ++
Sbjct: 85 TLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSV 144
Query: 214 FVNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELY----EEEYNELVDIYSFGMC 269
++ + +I + + Q P + P ++APE E+ D++SF +
Sbjct: 145 MIDEDM-TARISMADVKFSFQSP---GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVL 200
Query: 270 ILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCL 318
+ E+VT E P+++ N K G++P ++ P + ++ C+
Sbjct: 201 LWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGIS-PHVSKLMKICM 248
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 25/213 (11%)
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 198
N+VK D KT ++I E + + + + DI+ + ++L L Y HS
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY---YIYELLKALDYCHS 145
Query: 199 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELYE--E 255
I+HRD+K N+ ++ ++++ D GLA +V + + F PEL +
Sbjct: 146 QG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 203
Query: 256 EYNELVDIYSFGMCILEMV----TFEYPYSECKNPAQIFKKVTSGIKPASLAKVN---DP 308
+Y+ +D++S G M+ F Y + +I K + + L K DP
Sbjct: 204 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 263
Query: 309 QIKGFIEKCLVPASERLSAKDLLKDPFLQVENQ 341
Q++ + R S K LK F+ +NQ
Sbjct: 264 QLEALV--------GRHSRKPWLK--FMNADNQ 286
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 25/213 (11%)
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 198
N+VK D KT ++I E + + + + DI+ + ++L L Y HS
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY---YIYELLKALDYCHS 143
Query: 199 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELYE--E 255
I+HRD+K N+ ++ ++++ D GLA +V + + F PEL +
Sbjct: 144 QG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 256 EYNELVDIYSFGMCILEMV----TFEYPYSECKNPAQIFKKVTSGIKPASLAKVN---DP 308
+Y+ +D++S G M+ F Y + +I K + + L K DP
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 261
Query: 309 QIKGFIEKCLVPASERLSAKDLLKDPFLQVENQ 341
Q++ + R S K LK F+ +NQ
Sbjct: 262 QLEALV--------GRHSRKPWLK--FMNADNQ 284
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 25/213 (11%)
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 198
N+VK D KT ++I E + + + + DI+ + ++L L Y HS
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY---YIYELLKALDYCHS 143
Query: 199 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELYE--E 255
I+HRD+K N+ ++ ++++ D GLA +V + + F PEL +
Sbjct: 144 QG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 256 EYNELVDIYSFGMCILEMV----TFEYPYSECKNPAQIFKKVTSGIKPASLAKVN---DP 308
+Y+ +D++S G M+ F Y + +I K + + L K DP
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 261
Query: 309 QIKGFIEKCLVPASERLSAKDLLKDPFLQVENQ 341
Q++ + R S K LK F+ +NQ
Sbjct: 262 QLEALV--------GRHSRKPWLK--FMNADNQ 284
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 25/213 (11%)
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 198
N+VK D KT ++I E + + + + DI+ + ++L L Y HS
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY---YIYELLKALDYCHS 143
Query: 199 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELYE--E 255
I+HRD+K N+ ++ ++++ D GLA +V + + F PEL +
Sbjct: 144 QG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 256 EYNELVDIYSFGMCILEMV----TFEYPYSECKNPAQIFKKVTSGIKPASLAKVN---DP 308
+Y+ +D++S G M+ F Y + +I K + + L K DP
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 261
Query: 309 QIKGFIEKCLVPASERLSAKDLLKDPFLQVENQ 341
Q++ + R S K LK F+ +NQ
Sbjct: 262 QLEALV--------GRHSRKPWLK--FMNADNQ 284
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 25/213 (11%)
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 198
N+VK D KT ++I E + + + + DI+ + ++L L Y HS
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY---YIYELLKALDYCHS 143
Query: 199 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELYE--E 255
I+HRD+K N+ ++ ++++ D GLA +V + + F PEL +
Sbjct: 144 QG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 256 EYNELVDIYSFGMCILEMV----TFEYPYSECKNPAQIFKKVTSGIKPASLAKVN---DP 308
+Y+ +D++S G M+ F Y + +I K + + L K DP
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 261
Query: 309 QIKGFIEKCLVPASERLSAKDLLKDPFLQVENQ 341
Q++ + R S K LK F+ +NQ
Sbjct: 262 QLEALV--------GRHSRKPWLK--FMNADNQ 284
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 198
N+VK D KT ++I E + + + + DI+ + ++L L Y HS
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY---YIYELLKALDYCHS 144
Query: 199 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELYE--E 255
I+HRD+K N+ ++ ++++ D GLA +V + + F PEL +
Sbjct: 145 QG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 202
Query: 256 EYNELVDIYSFGMCILEMVTFEYPY 280
+Y+ +D++S G M+ + P+
Sbjct: 203 DYDYSLDMWSLGCMFAGMIFRKEPF 227
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 25/213 (11%)
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 198
N+VK D KT ++I E + + + + DI+ + ++L L Y HS
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY---YIYELLKALDYCHS 144
Query: 199 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELYE--E 255
I+HRD+K N+ ++ ++++ D GLA +V + + F PEL +
Sbjct: 145 QG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 202
Query: 256 EYNELVDIYSFGMCILEMV----TFEYPYSECKNPAQIFKKVTSGIKPASLAKVN---DP 308
+Y+ +D++S G M+ F Y + +I K + + L K DP
Sbjct: 203 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 262
Query: 309 QIKGFIEKCLVPASERLSAKDLLKDPFLQVENQ 341
Q++ + R S K LK F+ +NQ
Sbjct: 263 QLEALV--------GRHSRKPWLK--FMNADNQ 285
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 25/213 (11%)
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 198
N+VK D KT ++I E + + + + DI+ + ++L L Y HS
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY---YIYELLKALDYCHS 143
Query: 199 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELYE--E 255
I+HRD+K N+ ++ ++++ D GLA +V + + F PEL +
Sbjct: 144 QG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 256 EYNELVDIYSFGMCILEMV----TFEYPYSECKNPAQIFKKVTSGIKPASLAKVN---DP 308
+Y+ +D++S G M+ F Y + +I K + + L K DP
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 261
Query: 309 QIKGFIEKCLVPASERLSAKDLLKDPFLQVENQ 341
Q++ + R S K LK F+ +NQ
Sbjct: 262 QLEALV--------GRHSRKPWLK--FMNADNQ 284
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 25/213 (11%)
Query: 139 NVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHS 198
N+VK D KT ++I E + + + + DI+ + ++L L Y HS
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY---YIYELLKALDYCHS 143
Query: 199 HNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSV-IGTPEFMAPELYE--E 255
I+HRD+K N+ ++ ++++ D GLA +V + + F PEL +
Sbjct: 144 QG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 256 EYNELVDIYSFGMCILEMV----TFEYPYSECKNPAQIFKKVTSGIKPASLAKVN---DP 308
+Y+ +D++S G M+ F Y + +I K + + L K DP
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 261
Query: 309 QIKGFIEKCLVPASERLSAKDLLKDPFLQVENQ 341
Q++ + R S K LK F+ +NQ
Sbjct: 262 QLEALV--------GRHSRKPWLK--FMNADNQ 284
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 24/106 (22%)
Query: 184 NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARSVIG 243
+++ Q+ G+ +L S IHRDL NI ++ N+ VKI D GL AR +
Sbjct: 203 SYSFQVARGMEFLSSRK--CIHRDLAARNILLSENN-VVKICDFGL--------ARDIYK 251
Query: 244 TPEF------------MAPE-LYEEEYNELVDIYSFGMCILEMVTF 276
P++ MAPE ++++ Y+ D++S+G+ + E+ +
Sbjct: 252 NPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSL 297
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 23/205 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRV-------KIDDVLQLPGDLQKLYSEVHLLKSLKD 137
+ G++ V D GI VA RV + ++L +++ E+ LL
Sbjct: 30 ISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 138 DNVVKFYKSWVDDKKKTVN---MITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLV 194
N++ +V ++ ++ ++TEL + + + + + I+ + IL GL
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLH 148
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS----VIGTPEFMAP 250
LH ++HRDL NI + N ++ I D LA ++ TA + + + AP
Sbjct: 149 VLHE--AGVVHRDLHPGNILLADN-NDITICDFNLA---REDTADANKTHYVTHRWYRAP 202
Query: 251 ELYEE--EYNELVDIYSFGMCILEM 273
EL + + +LVD++S G + EM
Sbjct: 203 ELVMQFKGFTKLVDMWSAGCVMAEM 227
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 23/205 (11%)
Query: 85 LGKGAFKTVYKAFDEFAGIEVAWSRV-------KIDDVLQLPGDLQKLYSEVHLLKSLKD 137
+ G++ V D GI VA RV + ++L +++ E+ LL
Sbjct: 30 ISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 138 DNVVKFYKSWVDDKKKTVN---MITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLV 194
N++ +V ++ ++ ++TEL + + + + + I+ + IL GL
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLH 148
Query: 195 YLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTARS----VIGTPEFMAP 250
LH ++HRDL NI + N ++ I D LA ++ TA + + + AP
Sbjct: 149 VLHE--AGVVHRDLHPGNILLADN-NDITICDFNLA---REDTADANKTHYVTHRWYRAP 202
Query: 251 ELYEE--EYNELVDIYSFGMCILEM 273
EL + + +LVD++S G + EM
Sbjct: 203 ELVMQFKGFTKLVDMWSAGCVMAEM 227
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 7/109 (6%)
Query: 171 RKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLA 230
R K + + + + +IL L YLHS +++ DLK +NI + ++K+ DLG
Sbjct: 173 RSKGQKLPVAEAIAYLLEILPALSYLHSIG--LVYNDLKPENIMLTEE--QLKLIDLGAV 228
Query: 231 IAMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMVTFEYP 279
+ + + GTP F APE+ DIY+ G L +T + P
Sbjct: 229 SRIN--SFGYLYGTPGFQAPEIVRTGPTVATDIYTVGRT-LAALTLDLP 274
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 26/156 (16%)
Query: 75 SGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKS 134
+GRY LG G F TV+ +D VA VK + E+ LLK
Sbjct: 30 NGRY-HVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVK-----SAQHYTETALDEIKLLKC 83
Query: 135 LKD--------DNVVKFYKSWVDDKKKT------VNMITELFTSGNLRQYRK-KHKNVDI 179
+++ D VV+ +DD K + V M+ E+ L+ K ++ + +
Sbjct: 84 VRESDPSDPNKDMVVQL----IDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPV 139
Query: 180 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFV 215
+ +K+ RQ+L GL YLHS IIH D+K +NI +
Sbjct: 140 RCVKSIIRQVLQGLDYLHS-KCKIIHTDIKPENILM 174
>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle
Checkpoint Kinase Bub
Length = 365
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 15/150 (10%)
Query: 77 RYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLK 136
+ V +LG+GAF VY+A + A ++ K +Q P + + Y L++ LK
Sbjct: 65 KLVYVHHLLGEGAFAQVYEATQ--GDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLK 122
Query: 137 ---DDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKV-----IKNWARQ 188
+KFY + + ++ EL++ G L +KN KV + ++A +
Sbjct: 123 PSMQHMFMKFYSAHLFQNGSV--LVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMR 180
Query: 189 ILHGLVYLHSHNPPIIHRDLKCDNIFVNGN 218
+L+ + H+ IIH D+K DN F+ GN
Sbjct: 181 MLYMIE--QVHDCEIIHGDIKPDN-FILGN 207
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 66/167 (39%), Gaps = 11/167 (6%)
Query: 157 MITELFTSGNLRQYRKKHKN--VDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIF 214
+IT G+L + N VD +A G +LH+ P I L ++
Sbjct: 86 LITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHALNSRSVX 145
Query: 215 VNGNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELY----EEEYNELVDIYSFGMCI 270
++ + +I + + Q P P ++APE E+ D +SF + +
Sbjct: 146 IDED-XTARISXADVKFSFQSPGRXY---APAWVAPEALQKKPEDTNRRSADXWSFAVLL 201
Query: 271 LEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKC 317
E+VT E P+++ N K G++P ++ P + + C
Sbjct: 202 WELVTREVPFADLSNXEIGXKVALEGLRPTIPPGIS-PHVSKLXKIC 247
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 11/157 (7%)
Query: 76 GRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL 135
G R +G G+F +Y D AG EVA +K++ V +L+ E + K +
Sbjct: 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVA---IKLECV---KTKHPQLHIESKIYKMM 61
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVY 195
+ + + W + M+ EL + + +K + A Q++ + Y
Sbjct: 62 QGGVGIPTIR-WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEY 120
Query: 196 LHSHNPPIIHRDLKCDNIFVN-GNHGE-VKIGDLGLA 230
+HS N IHRD+K DN + G G V I D GLA
Sbjct: 121 IHSKN--FIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 18/160 (11%)
Query: 75 SGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKS 134
+GRY LG G F TV+ ++D VA VK + + E+ LLKS
Sbjct: 36 NGRY-HVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYT-----ETALDEIRLLKS 89
Query: 135 LKD----DNVVKFYKSWVDDKKKT------VNMITELFTSGNLRQYRK-KHKNVDIKVIK 183
+++ D + +DD K + + M+ E+ L+ K ++ + + +K
Sbjct: 90 VRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVK 149
Query: 184 NWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 223
+Q+L GL YLH+ IIH D+K +NI ++ N ++
Sbjct: 150 KIIQQVLQGLDYLHT-KCRIIHTDIKPENILLSVNEQYIR 188
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 11/157 (7%)
Query: 76 GRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL 135
G R +G G+F +Y D AG EVA +K++ V +L+ E + K +
Sbjct: 6 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVA---IKLECV---KTKHPQLHIESKIYKMM 59
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVY 195
+ + + W + M+ EL + + +K + A Q++ + Y
Sbjct: 60 QGGVGIPTIR-WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEY 118
Query: 196 LHSHNPPIIHRDLKCDNIFVN-GNHGE-VKIGDLGLA 230
+HS N IHRD+K DN + G G V I D GLA
Sbjct: 119 IHSKN--FIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 153
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 26/164 (15%)
Query: 75 SGRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKS 134
+GRY LG G F TV+ ++D VA VK + + E+ LLKS
Sbjct: 20 NGRY-HVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYT-----ETALDEIRLLKS 73
Query: 135 LKDDN--------VVKFYKSWVDDKKKT------VNMITELFTSGNLRQYRK-KHKNVDI 179
+++ + VV+ +DD K + + M+ E+ L+ K ++ + +
Sbjct: 74 VRNSDPNDPNREMVVQL----LDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPL 129
Query: 180 KVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVK 223
+K +Q+L GL YLH+ IIH D+K +NI ++ N ++
Sbjct: 130 PCVKKIIQQVLQGLDYLHT-KCRIIHTDIKPENILLSVNEQYIR 172
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 205 HRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPTAR---SVIGTPEFMAPELYEEEYNEL- 260
HRD+K +NI V+ + + D G+A A + +GT + APE + E +
Sbjct: 157 HRDVKPENILVSADDFAYLV-DFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYR 215
Query: 261 VDIYSFGMCILEMVTFEYPY 280
DIY+ + E +T PY
Sbjct: 216 ADIYALTCVLYECLTGSPPY 235
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 11/157 (7%)
Query: 76 GRYVRYDEVLGKGAFKTVYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSL 135
G R +G G+F +Y + +G EVA +K++ V +L+ E K +
Sbjct: 8 GNKYRLGRKIGSGSFGDIYLGANIASGEEVA---IKLECV---KTKHPQLHIESKFYKMM 61
Query: 136 KDDNVVKFYKSWVDDKKKTVNMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVY 195
+ + K W + M+ EL + + +K + A Q++ + Y
Sbjct: 62 QGGVGIPSIK-WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEY 120
Query: 196 LHSHNPPIIHRDLKCDNIFVN-GNHGE-VKIGDLGLA 230
+HS N IHRD+K DN + G G V I D GLA
Sbjct: 121 IHSKN--FIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155
>pdb|3PPV|A Chain A, Crystal Structure Of An Engineered Vwf A2 Domain (N1493c
And C1670s)
Length = 196
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 242 IGTPEFMAPELYEEEYNELVDIY--SFGMCILE---MVTFEYPYSECKNPAQIFKKV 293
IG +F + + EE + +D+ S + +L+ MVT EYP+SE ++ I ++V
Sbjct: 23 IGEADFNRSKEFMEEVIQRMDVGQDSIHVTVLQYSYMVTVEYPFSEAQSKGDILQRV 79
>pdb|3PPX|A Chain A, Crystal Structure Of The N1602a Mutant Of An Engineered
Vwf A2 Domain (N1493c And C1670s)
Length = 196
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 242 IGTPEFMAPELYEEEYNELVDIY--SFGMCILE---MVTFEYPYSECKNPAQIFKKV 293
IG +F + + EE + +D+ S + +L+ MVT EYP+SE ++ I ++V
Sbjct: 23 IGEADFNRSKEFMEEVIQRMDVGQDSIHVTVLQYSYMVTVEYPFSEAQSKGDILQRV 79
>pdb|3PPW|A Chain A, Crystal Structure Of The D1596a Mutant Of An Engineered
Vwf A2 Domain (N1493c And C1670s)
Length = 196
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 242 IGTPEFMAPELYEEEYNELVDIY--SFGMCILE---MVTFEYPYSECKNPAQIFKKV 293
IG +F + + EE + +D+ S + +L+ MVT EYP+SE ++ I ++V
Sbjct: 23 IGEADFNRSKEFMEEVIQRMDVGQDSIHVTVLQYSYMVTVEYPFSEAQSKGDILQRV 79
>pdb|3PPY|A Chain A, Crystal Structure Of The D1596aN1602A DOUBLE MUTANT OF AN
ENGINEERED Vwf A2 Domain (N1493c And C1670s)
Length = 196
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 242 IGTPEFMAPELYEEEYNELVDIY--SFGMCILE---MVTFEYPYSECKNPAQIFKKV 293
IG +F + + EE + +D+ S + +L+ MVT EYP+SE ++ I ++V
Sbjct: 23 IGEADFNRSKEFMEEVIQRMDVGQDSIHVTVLQYSYMVTVEYPFSEAQSKGDILQRV 79
>pdb|3GXB|A Chain A, Crystal Structure Of Vwf A2 Domain
pdb|3GXB|B Chain B, Crystal Structure Of Vwf A2 Domain
Length = 184
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 242 IGTPEFMAPELYEEEYNELVDIY--SFGMCILE---MVTFEYPYSECKNPAQIFKKV 293
IG +F + + EE + +D+ S + +L+ MVT EYP+SE ++ I ++V
Sbjct: 15 IGEADFNRSKEFMEEVIQRMDVGQDSIHVTVLQYSYMVTVEYPFSEAQSKGDILQRV 71
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 30/153 (19%), Positives = 65/153 (42%), Gaps = 24/153 (15%)
Query: 175 KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIF--VNGNHGEVKIGDLGLAIA 232
+ + +K + A Q+++ + ++HS + +HRD+K DN + +V I D GLA
Sbjct: 98 RKLSLKTVLMLADQMINRVEFVHSKS--FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK 155
Query: 233 MQQPTA---------RSVIGTPEFMAPELYEE-EYNELVDIYSFGMCILEMVTFEYPYSE 282
+ + +++ GT + + + E + D+ S G ++ + P+
Sbjct: 156 YRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 215
Query: 283 CKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 315
K +G K K+++ ++ IE
Sbjct: 216 LK----------AGTKKQKYEKISEKKVATSIE 238
>pdb|4G68|C Chain C, Biochemical And Structural Insights Into Xylan Utilization
By The Thermophilic Bacteriumcaldanaerobius
Polysaccharolyticus
Length = 432
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 471 IDYLIMKLLPGWK-PSYDYSSSGALSFYSVSPILGNGKTSTPSPWD 515
+DYLI LP WK + D S L ++ I+ N K S P+ WD
Sbjct: 349 MDYLIATGLPAWKYDNIDQSKVDPLEIQIMNNIVANAKGSVPA-WD 393
>pdb|4G68|B Chain B, Biochemical And Structural Insights Into Xylan Utilization
By The Thermophilic Bacteriumcaldanaerobius
Polysaccharolyticus
Length = 432
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 471 IDYLIMKLLPGWK-PSYDYSSSGALSFYSVSPILGNGKTSTPSPWD 515
+DYLI LP WK + D S L ++ I+ N K S P+ WD
Sbjct: 349 MDYLIATGLPAWKYDNIDQSKVDPLEIQIMNNIVANAKGSVPA-WD 393
>pdb|4G68|A Chain A, Biochemical And Structural Insights Into Xylan Utilization
By The Thermophilic Bacteriumcaldanaerobius
Polysaccharolyticus
Length = 456
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 471 IDYLIMKLLPGWK-PSYDYSSSGALSFYSVSPILGNGKTSTPSPWD 515
+DYLI LP WK + D S L ++ I+ N K S P+ WD
Sbjct: 373 MDYLIATGLPAWKYDNIDQSKVDPLEIQIMNNIVANAKGSVPA-WD 417
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.136 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,774,142
Number of Sequences: 62578
Number of extensions: 941782
Number of successful extensions: 4766
Number of sequences better than 100.0: 983
Number of HSP's better than 100.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 795
Number of HSP's that attempted gapping in prelim test: 2961
Number of HSP's gapped (non-prelim): 1051
length of query: 719
length of database: 14,973,337
effective HSP length: 106
effective length of query: 613
effective length of database: 8,340,069
effective search space: 5112462297
effective search space used: 5112462297
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)