Query 005023
Match_columns 718
No_of_seqs 328 out of 1448
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 13:02:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005023.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005023hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fp3_A N-acyl-D-glucosamine 2- 100.0 2.4E-35 8.1E-40 325.4 21.0 336 157-571 19-392 (402)
2 2gz6_A N-acetyl-D-glucosamine 100.0 2.2E-34 7.6E-39 315.7 21.4 252 215-597 19-272 (388)
3 2zbl_A Putative isomerase; N-a 100.0 1.2E-32 4.2E-37 306.1 25.1 305 157-602 17-355 (421)
4 3ira_A Conserved protein; meth 100.0 1.3E-33 4.3E-38 277.0 13.2 139 2-140 28-169 (173)
5 3gt5_A N-acetylglucosamine 2-e 99.9 6.6E-25 2.3E-29 242.5 23.1 259 211-596 13-281 (402)
6 1fp3_A N-acyl-D-glucosamine 2- 99.9 4.7E-23 1.6E-27 227.1 25.7 308 211-600 17-351 (402)
7 3gt5_A N-acetylglucosamine 2-e 99.9 2.3E-22 7.8E-27 222.2 21.7 337 157-571 15-388 (402)
8 2gz6_A N-acetyl-D-glucosamine 99.9 2.8E-21 9.5E-26 211.6 26.7 338 155-571 15-382 (388)
9 2zzr_A Unsaturated glucuronyl 99.9 1.2E-21 4E-26 214.9 22.8 256 187-599 74-346 (397)
10 2zbl_A Putative isomerase; N-a 99.9 3.3E-21 1.1E-25 214.2 23.1 249 225-599 27-289 (421)
11 2ahf_A Unsaturated glucuronyl 99.8 4.9E-20 1.7E-24 201.2 21.1 256 187-599 48-321 (377)
12 2dlx_A UBX domain-containing p 99.8 4.9E-19 1.7E-23 170.1 9.5 99 3-113 32-134 (153)
13 3k7x_A LIN0763 protein; Q92DQ0 99.7 2.4E-16 8.3E-21 170.8 26.6 241 186-595 51-298 (349)
14 3ph9_A Anterior gradient prote 99.6 2.2E-15 7.6E-20 144.3 9.0 108 3-119 34-146 (151)
15 3h7l_A Endoglucanase; dehydrog 99.5 5.9E-14 2E-18 159.9 17.7 147 417-597 251-397 (586)
16 3f9u_A Putative exported cytoc 99.4 1.4E-13 4.8E-18 133.0 9.1 111 3-119 37-170 (172)
17 3k7x_A LIN0763 protein; Q92DQ0 99.4 2.7E-12 9.4E-17 139.0 14.7 141 416-600 46-187 (349)
18 3pmm_A Putative cytoplasmic pr 99.3 2.2E-11 7.4E-16 133.5 17.3 177 379-600 20-207 (382)
19 2ahf_A Unsaturated glucuronyl 99.3 2.8E-10 9.6E-15 124.2 22.1 252 205-575 105-367 (377)
20 2zzr_A Unsaturated glucuronyl 99.2 2.1E-10 7.2E-15 125.8 19.3 211 205-530 131-348 (397)
21 3k11_A Putative glycosyl hydro 99.2 3.7E-11 1.3E-15 133.4 12.9 186 381-599 27-240 (445)
22 3fk8_A Disulphide isomerase; A 99.2 2E-11 7E-16 112.4 7.8 102 3-113 19-131 (133)
23 1nc5_A Hypothetical protein YT 99.1 2.8E-10 9.5E-15 124.3 14.0 142 414-600 36-180 (373)
24 2ju5_A Thioredoxin disulfide i 99.1 1.1E-10 3.8E-15 111.1 9.4 106 3-112 37-149 (154)
25 1nc5_A Hypothetical protein YT 99.1 2.9E-09 9.9E-14 116.2 20.9 258 182-598 42-314 (373)
26 3pmm_A Putative cytoplasmic pr 99.1 7.1E-09 2.4E-13 113.5 22.6 151 419-599 173-333 (382)
27 2kuc_A Putative disulphide-iso 99.0 2.8E-10 9.5E-15 104.0 7.7 81 3-91 17-102 (130)
28 2ec4_A FAS-associated factor 1 99.0 5.2E-10 1.8E-14 109.8 9.9 109 3-118 41-171 (178)
29 3k11_A Putative glycosyl hydro 99.0 6.8E-09 2.3E-13 115.3 18.3 268 181-599 82-365 (445)
30 2fwh_A Thiol:disulfide interch 98.9 1.8E-09 6.1E-14 99.9 8.9 90 13-113 31-126 (134)
31 2lst_A Thioredoxin; structural 98.5 1.1E-10 3.9E-15 106.8 0.0 96 3-112 9-113 (130)
32 3dml_A Putative uncharacterize 98.7 8.9E-09 3.1E-13 93.9 3.7 81 19-115 27-110 (116)
33 2l57_A Uncharacterized protein 98.6 5.3E-08 1.8E-12 88.4 6.0 72 8-90 21-97 (126)
34 1nsw_A Thioredoxin, TRX; therm 98.5 5.9E-08 2E-12 84.7 5.2 75 4-90 8-85 (105)
35 3hxs_A Thioredoxin, TRXP; elec 98.5 9.2E-08 3.1E-12 88.4 6.7 74 12-96 50-126 (141)
36 2l5l_A Thioredoxin; structural 98.5 1.3E-07 4.5E-12 87.3 7.5 74 12-96 37-113 (136)
37 3tco_A Thioredoxin (TRXA-1); d 98.5 1.5E-07 5E-12 82.3 7.3 77 3-91 11-90 (109)
38 1ep7_A Thioredoxin CH1, H-type 98.5 1.5E-07 5.1E-12 83.1 7.3 75 4-90 15-92 (112)
39 2trx_A Thioredoxin; electron t 98.5 2.9E-07 1E-11 80.6 8.1 71 8-90 15-88 (108)
40 1dby_A Chloroplast thioredoxin 98.5 2.9E-07 9.9E-12 80.5 7.9 86 9-112 15-104 (107)
41 2voc_A Thioredoxin; electron t 98.5 3E-07 1E-11 81.7 7.8 74 4-90 9-85 (112)
42 1ti3_A Thioredoxin H, PTTRXH1; 98.4 3.7E-07 1.3E-11 80.5 8.1 93 3-114 16-111 (113)
43 3ul3_B Thioredoxin, thioredoxi 98.4 1.1E-07 3.7E-12 86.9 4.3 75 4-90 33-110 (128)
44 2i4a_A Thioredoxin; acidophIle 98.4 3.4E-07 1.2E-11 79.8 7.4 70 9-90 16-88 (107)
45 2yzu_A Thioredoxin; redox prot 98.4 2.7E-07 9.2E-12 80.5 6.3 75 4-90 9-86 (109)
46 1oaz_A Thioredoxin 1; immune s 98.4 1.1E-07 3.9E-12 86.7 3.9 74 8-90 16-103 (123)
47 3f3q_A Thioredoxin-1; His TAG, 98.4 4E-07 1.4E-11 80.7 7.4 76 3-91 14-92 (109)
48 1sen_A Thioredoxin-like protei 98.4 5E-07 1.7E-11 86.7 8.6 78 3-90 36-118 (164)
49 3gnj_A Thioredoxin domain prot 98.4 6.2E-07 2.1E-11 78.8 8.4 75 4-90 12-90 (111)
50 1fb6_A Thioredoxin M; electron 98.4 5.4E-07 1.9E-11 78.2 7.5 86 9-112 14-103 (105)
51 1xfl_A Thioredoxin H1; AT3G510 98.4 4.6E-07 1.6E-11 82.5 7.2 75 3-90 28-105 (124)
52 1w4v_A Thioredoxin, mitochondr 98.4 6E-07 2E-11 80.8 7.5 71 8-90 26-99 (119)
53 1t00_A Thioredoxin, TRX; redox 98.4 5.8E-07 2E-11 79.4 7.1 72 7-90 17-91 (112)
54 3h7l_A Endoglucanase; dehydrog 98.4 4.2E-06 1.4E-10 95.6 15.8 184 207-526 190-397 (586)
55 2vlu_A Thioredoxin, thioredoxi 98.4 6.3E-07 2.1E-11 80.5 7.4 74 4-90 25-101 (122)
56 2dml_A Protein disulfide-isome 98.4 1.1E-06 3.7E-11 79.8 8.9 68 9-87 31-101 (130)
57 2vm1_A Thioredoxin, thioredoxi 98.3 6.8E-07 2.3E-11 79.4 7.1 75 3-90 18-95 (118)
58 2dj1_A Protein disulfide-isome 98.3 8.4E-07 2.9E-11 81.7 7.8 74 4-89 25-104 (140)
59 3zzx_A Thioredoxin; oxidoreduc 98.3 6.7E-07 2.3E-11 79.6 6.5 67 11-90 18-87 (105)
60 1thx_A Thioredoxin, thioredoxi 98.3 1.2E-06 4.1E-11 77.3 8.0 69 10-90 22-93 (115)
61 2o8v_B Thioredoxin 1; disulfid 98.3 7.5E-07 2.6E-11 81.7 6.9 71 8-90 35-108 (128)
62 2e0q_A Thioredoxin; electron t 98.3 9.3E-07 3.2E-11 76.1 7.0 75 3-90 6-83 (104)
63 3qfa_C Thioredoxin; protein-pr 98.3 9.2E-07 3.2E-11 79.4 7.0 75 4-91 20-99 (116)
64 3die_A Thioredoxin, TRX; elect 98.3 7.4E-07 2.5E-11 77.5 6.2 74 4-90 11-87 (106)
65 1wmj_A Thioredoxin H-type; str 98.3 7.5E-07 2.6E-11 80.7 6.3 75 3-90 26-103 (130)
66 3d22_A TRXH4, thioredoxin H-ty 98.3 1E-06 3.4E-11 81.3 6.9 74 4-90 37-113 (139)
67 3hz4_A Thioredoxin; NYSGXRC, P 98.3 2.2E-06 7.4E-11 79.6 9.1 71 8-90 19-92 (140)
68 3p2a_A Thioredoxin 2, putative 98.3 1.4E-06 4.9E-11 81.3 7.9 75 4-90 46-123 (148)
69 3d6i_A Monothiol glutaredoxin- 98.3 1.5E-06 5E-11 76.8 7.5 68 11-90 19-90 (112)
70 4euy_A Uncharacterized protein 98.3 3.5E-07 1.2E-11 80.3 3.3 80 4-96 9-92 (105)
71 3aps_A DNAJ homolog subfamily 98.3 1E-06 3.4E-11 79.2 6.3 71 7-88 15-88 (122)
72 3m9j_A Thioredoxin; oxidoreduc 98.3 1.6E-06 5.6E-11 75.2 7.3 74 4-90 9-87 (105)
73 2ppt_A Thioredoxin-2; thiredox 98.2 2.2E-06 7.4E-11 81.5 8.3 75 4-90 55-132 (155)
74 2i1u_A Thioredoxin, TRX, MPT46 98.2 8.1E-07 2.8E-11 79.4 4.8 72 7-90 24-98 (121)
75 1x5d_A Protein disulfide-isome 98.2 2.4E-06 8.2E-11 77.6 8.0 69 9-89 21-96 (133)
76 2f51_A Thioredoxin; electron t 98.2 1.3E-06 4.5E-11 78.7 6.2 75 5-91 14-95 (118)
77 1gh2_A Thioredoxin-like protei 98.2 2.3E-06 7.7E-11 75.1 7.5 73 5-90 11-88 (107)
78 2oe3_A Thioredoxin-3; electron 98.2 1.2E-06 4E-11 78.6 5.7 75 3-90 20-97 (114)
79 1xwb_A Thioredoxin; dimerizati 98.2 2E-06 6.7E-11 74.7 7.0 75 4-90 9-88 (106)
80 2j23_A Thioredoxin; immune pro 98.2 1.2E-06 4.3E-11 79.0 5.7 75 4-90 24-102 (121)
81 1mek_A Protein disulfide isome 98.2 1.2E-06 4.1E-11 77.7 5.1 75 3-89 14-94 (120)
82 2wz9_A Glutaredoxin-3; protein 98.2 2.5E-06 8.4E-11 80.5 7.3 74 4-90 21-99 (153)
83 3gix_A Thioredoxin-like protei 98.2 2E-06 6.7E-11 81.3 6.5 74 4-89 12-90 (149)
84 1r26_A Thioredoxin; redox-acti 98.1 3.8E-06 1.3E-10 76.7 7.7 74 4-90 28-104 (125)
85 2av4_A Thioredoxin-like protei 98.1 2.6E-06 8.8E-11 81.4 6.4 74 4-89 30-108 (160)
86 2dj3_A Protein disulfide-isome 98.1 3.7E-06 1.3E-10 76.6 7.3 65 12-87 24-93 (133)
87 3apq_A DNAJ homolog subfamily 98.1 5E-06 1.7E-10 82.6 8.6 75 4-90 105-182 (210)
88 1syr_A Thioredoxin; SGPP, stru 98.1 2.9E-06 9.9E-11 75.2 6.0 75 3-90 16-93 (112)
89 1qgv_A Spliceosomal protein U5 98.1 4.1E-06 1.4E-10 78.4 7.3 67 12-90 22-91 (142)
90 2vim_A Thioredoxin, TRX; thior 98.1 5.5E-06 1.9E-10 71.6 7.5 74 4-90 8-86 (104)
91 2l6c_A Thioredoxin; oxidoreduc 98.1 2.9E-06 9.9E-11 75.2 5.8 79 5-97 12-94 (110)
92 3qou_A Protein YBBN; thioredox 98.1 4.7E-06 1.6E-10 86.5 8.2 67 12-90 25-94 (287)
93 2xc2_A Thioredoxinn; oxidoredu 98.1 6.6E-06 2.2E-10 73.4 8.0 72 4-90 22-99 (117)
94 1nho_A Probable thioredoxin; b 98.0 5.4E-06 1.8E-10 69.1 5.7 57 18-88 9-65 (85)
95 2pu9_C TRX-F, thioredoxin F-ty 98.0 7.9E-06 2.7E-10 72.0 7.1 66 12-90 23-92 (111)
96 2yj7_A LPBCA thioredoxin; oxid 97.3 7.7E-07 2.6E-11 77.0 0.0 71 8-90 14-87 (106)
97 2djj_A PDI, protein disulfide- 98.0 5.2E-06 1.8E-10 74.2 5.4 68 6-87 17-93 (121)
98 3cxg_A Putative thioredoxin; m 98.0 5.7E-06 2E-10 76.2 5.6 65 12-90 39-110 (133)
99 1fo5_A Thioredoxin; disulfide 98.0 7.4E-06 2.5E-10 68.2 5.6 57 18-88 10-66 (85)
100 3uvt_A Thioredoxin domain-cont 97.9 1.7E-05 5.8E-10 69.3 7.5 70 5-90 14-92 (111)
101 1x5e_A Thioredoxin domain cont 97.9 9.5E-06 3.2E-10 73.3 6.0 59 19-89 31-90 (126)
102 3hcz_A Possible thiol-disulfid 97.9 2.7E-05 9.1E-10 71.5 9.1 100 7-117 25-145 (148)
103 3dxb_A Thioredoxin N-terminall 97.9 1.2E-05 4E-10 80.8 7.2 74 5-90 21-98 (222)
104 1faa_A Thioredoxin F; electron 97.9 1.4E-05 4.9E-10 71.8 7.0 66 12-90 36-105 (124)
105 1v98_A Thioredoxin; oxidoreduc 97.9 1.5E-05 5E-10 73.6 6.8 73 6-90 43-118 (140)
106 1zma_A Bacterocin transport ac 97.9 4.8E-06 1.6E-10 74.5 3.3 79 4-90 20-101 (118)
107 2dj0_A Thioredoxin-related tra 97.9 2.9E-05 1E-09 71.4 8.4 75 12-98 25-110 (137)
108 1ks8_A Endo-B-1,4-glucanase; c 97.9 6E-05 2.1E-09 83.7 12.0 240 229-605 48-294 (433)
109 1z6n_A Hypothetical protein PA 97.8 1.1E-05 3.6E-10 78.1 4.7 91 12-118 53-146 (167)
110 2lja_A Putative thiol-disulfid 97.8 4.9E-05 1.7E-09 70.3 9.1 81 8-91 25-124 (152)
111 3or5_A Thiol:disulfide interch 97.8 2.7E-05 9.2E-10 73.1 7.1 83 6-91 27-132 (165)
112 3gzk_A Cellulase; fold from GH 97.8 8.7E-05 3E-09 84.5 12.5 90 415-522 242-334 (537)
113 2b1k_A Thiol:disulfide interch 97.8 2.2E-05 7.5E-10 74.4 6.3 92 11-114 49-159 (168)
114 3raz_A Thioredoxin-related pro 97.8 2.1E-05 7.1E-10 73.3 6.0 83 6-91 17-121 (151)
115 3h79_A Thioredoxin-like protei 97.8 5.6E-05 1.9E-09 68.4 8.5 66 11-87 31-104 (127)
116 2b5x_A YKUV protein, TRXY; thi 97.8 4.9E-05 1.7E-09 69.5 8.2 79 6-91 22-126 (148)
117 3ewl_A Uncharacterized conserv 97.8 2.7E-05 9.2E-10 71.4 6.2 84 8-91 22-125 (142)
118 1lu4_A Soluble secreted antige 97.8 3E-05 1E-09 70.0 6.4 79 7-89 18-113 (136)
119 2f9s_A Thiol-disulfide oxidore 97.8 4.7E-05 1.6E-09 70.6 7.9 82 7-91 20-119 (151)
120 4evm_A Thioredoxin family prot 97.8 2.6E-05 8.7E-10 70.0 5.6 82 7-91 16-120 (138)
121 3idv_A Protein disulfide-isome 97.8 3.6E-05 1.2E-09 77.2 7.3 76 3-90 22-103 (241)
122 2qgv_A Hydrogenase-1 operon pr 97.7 1.5E-05 5.1E-10 74.9 4.0 79 6-96 27-112 (140)
123 3e6u_A LANC-like protein 1; al 97.7 0.0013 4.4E-08 72.4 20.0 274 251-595 73-367 (411)
124 3gl3_A Putative thiol:disulfid 97.7 0.00013 4.5E-09 67.4 10.3 89 6-97 21-128 (152)
125 1zzo_A RV1677; thioredoxin fol 97.7 5.1E-05 1.7E-09 68.3 7.0 79 7-89 19-115 (136)
126 1ia6_A Cellulase CEL9M; cellul 97.7 0.00029 9.8E-09 78.4 14.3 182 228-521 49-237 (441)
127 1wou_A Thioredoxin -related pr 97.7 4.1E-05 1.4E-09 69.3 6.2 75 5-91 14-107 (123)
128 3kcm_A Thioredoxin family prot 97.7 7.8E-05 2.7E-09 69.1 7.9 101 6-113 21-141 (154)
129 3kh7_A Thiol:disulfide interch 97.7 8.5E-05 2.9E-09 71.5 8.2 86 5-96 50-154 (176)
130 1a8l_A Protein disulfide oxido 97.7 7.1E-05 2.4E-09 74.5 7.7 75 4-90 124-206 (226)
131 1kng_A Thiol:disulfide interch 97.6 0.00012 4E-09 67.9 8.4 82 4-91 33-133 (156)
132 2h30_A Thioredoxin, peptide me 97.6 2.5E-05 8.5E-10 73.3 3.6 21 71-91 117-137 (164)
133 1ilo_A Conserved hypothetical 97.6 4.8E-05 1.6E-09 62.2 4.5 61 17-95 6-66 (77)
134 3hdc_A Thioredoxin family prot 97.6 0.0001 3.5E-09 69.2 7.2 80 8-98 36-139 (158)
135 2lrn_A Thiol:disulfide interch 97.6 0.00019 6.6E-09 66.7 9.0 80 9-91 25-125 (152)
136 3emx_A Thioredoxin; structural 97.6 6.1E-05 2.1E-09 69.3 5.4 83 5-97 25-114 (135)
137 3erw_A Sporulation thiol-disul 97.6 6.4E-05 2.2E-09 68.5 5.4 82 12-96 33-136 (145)
138 1i5g_A Tryparedoxin II; electr 97.6 0.0001 3.5E-09 67.9 6.7 82 6-91 21-125 (144)
139 3ha9_A Uncharacterized thiored 97.6 0.0001 3.5E-09 69.5 6.9 83 7-96 31-150 (165)
140 3fkf_A Thiol-disulfide oxidore 97.5 0.00024 8.2E-09 65.0 9.0 80 10-92 30-131 (148)
141 2qsi_A Putative hydrogenase ex 97.5 0.00012 4.1E-09 68.4 6.2 74 12-97 32-111 (137)
142 3idv_A Protein disulfide-isome 97.5 0.00018 6.3E-09 71.9 7.6 75 4-90 138-218 (241)
143 2ls5_A Uncharacterized protein 96.6 1.8E-05 6.3E-10 74.2 0.0 103 6-115 26-148 (159)
144 1clc_A Endoglucanase CELD; EC: 97.4 0.0013 4.3E-08 76.5 15.3 90 415-522 286-378 (639)
145 1o8x_A Tryparedoxin, TRYX, TXN 97.4 0.00023 7.7E-09 65.7 7.3 79 8-90 23-124 (146)
146 3eyt_A Uncharacterized protein 97.4 0.00017 5.9E-09 67.2 6.4 84 5-91 20-133 (158)
147 1o73_A Tryparedoxin; electron 97.4 0.00024 8.3E-09 65.0 7.1 81 7-91 22-125 (144)
148 2es7_A Q8ZP25_salty, putative 97.4 5.8E-05 2E-09 70.9 2.5 72 6-90 27-105 (142)
149 1tf4_A T. fusca endo/EXO-cellu 97.3 0.0017 5.8E-08 74.9 14.8 85 417-521 152-240 (605)
150 3eur_A Uncharacterized protein 97.3 0.00018 6.2E-09 66.1 5.4 82 11-92 29-130 (142)
151 3lor_A Thiol-disulfide isomera 97.3 0.00034 1.1E-08 65.2 7.2 21 71-91 116-136 (160)
152 3lwa_A Secreted thiol-disulfid 97.3 0.00037 1.3E-08 66.9 7.6 82 7-91 53-162 (183)
153 3s9f_A Tryparedoxin; thioredox 97.3 0.00034 1.2E-08 66.5 7.1 82 7-91 42-145 (165)
154 1ttz_A Conserved hypothetical 97.3 0.0002 7E-09 61.5 5.0 60 17-97 6-65 (87)
155 2e7p_A Glutaredoxin; thioredox 97.3 0.00026 8.8E-09 62.8 5.8 73 5-90 12-85 (116)
156 3q6o_A Sulfhydryl oxidase 1; p 97.3 0.00043 1.5E-08 70.1 8.1 65 10-85 27-99 (244)
157 3kp8_A Vkorc1/thioredoxin doma 97.3 5.1E-05 1.8E-09 67.5 0.8 69 4-90 3-78 (106)
158 1g87_A Endocellulase 9G; endog 97.2 0.0096 3.3E-07 68.7 19.5 183 228-520 48-237 (614)
159 2dbc_A PDCL2, unnamed protein 97.2 0.00072 2.5E-08 62.2 8.3 62 13-90 30-94 (135)
160 2l5o_A Putative thioredoxin; s 97.2 0.00027 9.2E-09 65.3 5.4 80 8-90 23-121 (153)
161 2ywm_A Glutaredoxin-like prote 97.2 0.00048 1.7E-08 68.7 6.9 70 5-89 127-200 (229)
162 3f8u_A Protein disulfide-isome 97.2 0.0004 1.4E-08 77.4 6.8 68 8-87 365-437 (481)
163 3ia1_A THIO-disulfide isomeras 97.2 0.00052 1.8E-08 63.6 6.3 75 14-91 31-125 (154)
164 2xfg_A Endoglucanase 1; hydrol 97.1 0.0049 1.7E-07 68.8 15.3 182 229-520 70-259 (466)
165 2r2j_A Thioredoxin domain-cont 97.1 0.00047 1.6E-08 74.8 6.8 74 4-89 13-95 (382)
166 1jfu_A Thiol:disulfide interch 97.1 0.0013 4.3E-08 63.2 9.2 80 9-91 56-159 (186)
167 1sji_A Calsequestrin 2, calseq 97.1 0.00051 1.8E-08 73.5 6.0 74 4-89 19-102 (350)
168 2k8s_A Thioredoxin; dimer, str 97.0 0.00022 7.6E-09 59.4 2.2 59 17-92 7-69 (80)
169 2lus_A Thioredoxion; CR-Trp16, 96.1 0.0001 3.5E-09 67.3 0.0 80 11-93 23-126 (143)
170 3fw2_A Thiol-disulfide oxidore 97.0 0.0029 9.8E-08 58.4 9.8 80 10-92 30-133 (150)
171 2b5e_A Protein disulfide-isome 97.0 0.0011 3.8E-08 74.3 8.1 73 4-88 22-98 (504)
172 3ga4_A Dolichyl-diphosphooligo 96.9 0.00094 3.2E-08 65.1 6.1 58 21-89 55-117 (178)
173 4fo5_A Thioredoxin-like protei 96.9 0.002 6.9E-08 59.0 8.0 77 9-91 28-129 (143)
174 2lrt_A Uncharacterized protein 96.9 0.0021 7.2E-08 59.9 7.7 78 11-91 33-129 (152)
175 2hze_A Glutaredoxin-1; thiored 96.8 0.0023 7.9E-08 57.1 7.0 80 1-90 7-87 (114)
176 2yik_A Endoglucanase; hydrolas 96.8 0.0089 3.1E-07 69.0 13.5 86 418-521 219-306 (611)
177 2cvb_A Probable thiol-disulfid 96.7 0.0027 9.2E-08 61.1 7.5 80 9-91 29-132 (188)
178 2v8i_A Pectate lyase; periplas 96.7 0.7 2.4E-05 50.6 26.3 152 410-597 292-460 (543)
179 2ht9_A Glutaredoxin-2; thiored 96.7 0.0015 5.2E-08 61.4 5.2 73 4-90 40-114 (146)
180 3t58_A Sulfhydryl oxidase 1; o 96.7 0.0035 1.2E-07 71.1 9.1 69 10-89 27-106 (519)
181 2djk_A PDI, protein disulfide- 96.7 0.0034 1.2E-07 57.4 7.4 71 8-89 18-93 (133)
182 3ed3_A Protein disulfide-isome 96.6 0.0028 9.4E-08 66.6 7.0 71 5-86 26-102 (298)
183 3iv4_A Putative oxidoreductase 96.6 0.0033 1.1E-07 56.6 6.5 78 4-91 15-96 (112)
184 2b5e_A Protein disulfide-isome 96.6 0.0033 1.1E-07 70.5 7.9 65 10-88 373-443 (504)
185 3f8u_A Protein disulfide-isome 96.5 0.0022 7.4E-08 71.5 6.1 73 5-89 10-88 (481)
186 2cq9_A GLRX2 protein, glutared 96.5 0.0046 1.6E-07 56.7 7.2 72 4-89 18-91 (130)
187 2ywi_A Hypothetical conserved 96.5 0.0037 1.3E-07 60.3 6.8 22 71-92 126-147 (196)
188 2hyx_A Protein DIPZ; thioredox 96.5 0.0038 1.3E-07 67.3 7.5 81 8-91 77-180 (352)
189 2hls_A Protein disulfide oxido 96.5 0.0038 1.3E-07 63.5 7.1 58 19-90 147-208 (243)
190 3qcp_A QSOX from trypanosoma b 96.4 0.002 6.7E-08 72.0 4.9 66 11-87 40-116 (470)
191 1kte_A Thioltransferase; redox 96.4 0.0057 1.9E-07 53.1 6.7 73 4-89 3-79 (105)
192 3apo_A DNAJ homolog subfamily 96.4 0.0041 1.4E-07 73.6 7.4 71 8-90 670-743 (780)
193 2rli_A SCO2 protein homolog, m 96.3 0.0083 2.8E-07 56.3 7.8 78 11-91 24-145 (171)
194 2c0g_A ERP29 homolog, windbeut 96.3 0.0056 1.9E-07 62.8 6.9 69 5-87 25-105 (248)
195 2fgx_A Putative thioredoxin; N 96.2 0.0039 1.3E-07 55.7 4.8 58 19-91 37-94 (107)
196 2vup_A Glutathione peroxidase- 96.2 0.012 4.1E-07 56.9 8.7 21 71-91 140-166 (190)
197 1a0r_P Phosducin, MEKA, PP33; 96.2 0.003 1E-07 64.7 4.5 65 12-90 132-199 (245)
198 2p5q_A Glutathione peroxidase 96.2 0.016 5.6E-07 54.1 9.1 18 74-91 129-149 (170)
199 1a8l_A Protein disulfide oxido 96.1 0.0087 3E-07 59.1 7.3 56 20-88 32-90 (226)
200 2ywm_A Glutaredoxin-like prote 96.1 0.016 5.5E-07 57.5 9.3 55 21-83 33-89 (229)
201 3cmi_A Peroxiredoxin HYR1; thi 96.1 0.011 3.8E-07 55.9 7.7 21 71-91 123-149 (171)
202 2ri9_A Mannosyl-oligosaccharid 96.1 0.23 7.7E-06 55.5 19.1 119 451-578 313-448 (475)
203 3rhb_A ATGRXC5, glutaredoxin-C 96.1 0.0069 2.3E-07 53.7 5.7 74 4-89 10-84 (113)
204 3uem_A Protein disulfide-isome 96.1 0.0052 1.8E-07 65.6 5.7 63 10-85 264-331 (361)
205 3apo_A DNAJ homolog subfamily 96.1 0.0064 2.2E-07 72.0 7.0 74 4-89 124-200 (780)
206 2ggt_A SCO1 protein homolog, m 96.1 0.0066 2.3E-07 56.5 5.7 79 10-91 20-142 (164)
207 3c1r_A Glutaredoxin-1; oxidize 96.0 0.015 5.1E-07 52.3 7.6 76 4-89 16-93 (118)
208 2lqo_A Putative glutaredoxin R 96.0 0.015 5.1E-07 50.3 7.2 59 18-91 10-69 (92)
209 3us3_A Calsequestrin-1; calciu 95.9 0.0079 2.7E-07 64.9 6.2 77 4-89 21-104 (367)
210 1hyu_A AHPF, alkyl hydroperoxi 95.8 0.011 3.7E-07 66.9 7.2 58 19-91 126-183 (521)
211 3e6u_A LANC-like protein 1; al 95.8 0.069 2.4E-06 58.6 13.3 77 421-527 294-370 (411)
212 3h8q_A Thioredoxin reductase 3 95.8 0.014 4.6E-07 52.2 6.3 73 4-89 8-81 (114)
213 1x9d_A Endoplasmic reticulum m 95.8 0.44 1.5E-05 53.8 19.8 288 241-605 162-475 (538)
214 1hcu_A Alpha-1,2-mannosidase; 95.8 0.29 1E-05 55.0 18.2 260 245-578 169-467 (503)
215 3kp9_A Vkorc1/thioredoxin doma 95.7 0.0085 2.9E-07 62.9 5.0 69 3-89 189-262 (291)
216 1ia6_A Cellulase CEL9M; cellul 95.6 0.18 6E-06 55.9 15.4 110 171-287 50-194 (441)
217 2trc_P Phosducin, MEKA, PP33; 95.5 0.0038 1.3E-07 62.6 1.7 64 13-90 120-186 (217)
218 1wjk_A C330018D20RIK protein; 95.5 0.007 2.4E-07 52.8 3.1 52 19-89 24-77 (100)
219 1nxc_A Mannosyl-oligosaccharid 95.4 0.55 1.9E-05 52.4 18.9 286 243-608 100-412 (478)
220 2yan_A Glutaredoxin-3; oxidore 95.4 0.038 1.3E-06 48.3 7.5 69 5-89 9-83 (105)
221 3u5r_E Uncharacterized protein 95.3 0.034 1.2E-06 55.2 7.9 23 71-93 139-161 (218)
222 2k6v_A Putative cytochrome C o 95.3 0.016 5.6E-07 54.2 5.3 17 74-91 136-152 (172)
223 3nzn_A Glutaredoxin; structura 95.2 0.039 1.3E-06 48.0 7.0 69 11-89 20-89 (103)
224 1h75_A Glutaredoxin-like prote 95.0 0.04 1.4E-06 45.1 6.2 56 17-89 6-61 (81)
225 3drn_A Peroxiredoxin, bacterio 94.9 0.051 1.8E-06 50.7 7.5 76 12-91 27-126 (161)
226 1dl2_A Class I alpha-1,2-manno 94.9 2.2 7.6E-05 47.9 21.8 284 242-605 93-434 (511)
227 3dwv_A Glutathione peroxidase- 94.8 0.027 9.3E-07 54.3 5.4 19 73-91 143-164 (187)
228 3msz_A Glutaredoxin 1; alpha-b 94.6 0.025 8.4E-07 47.1 4.0 59 17-89 9-72 (89)
229 1x9d_A Endoplasmic reticulum m 94.6 0.046 1.6E-06 61.7 7.3 101 491-597 168-269 (538)
230 1eej_A Thiol:disulfide interch 94.6 0.074 2.5E-06 52.7 8.1 33 71-113 177-209 (216)
231 3evi_A Phosducin-like protein 94.6 0.048 1.6E-06 49.1 6.1 62 14-91 24-88 (118)
232 1fov_A Glutaredoxin 3, GRX3; a 94.6 0.074 2.5E-06 43.4 6.7 57 17-89 6-62 (82)
233 1xvq_A Thiol peroxidase; thior 94.5 0.16 5.5E-06 48.2 10.0 32 77-114 130-164 (175)
234 1ks8_A Endo-B-1,4-glucanase; c 94.5 2.3 7.7E-05 46.9 20.5 110 171-287 48-191 (433)
235 1ego_A Glutaredoxin; electron 94.5 0.034 1.2E-06 45.9 4.5 63 17-90 6-70 (85)
236 4hde_A SCO1/SENC family lipopr 94.4 0.11 3.8E-06 49.4 8.4 43 9-54 28-79 (170)
237 2v8i_A Pectate lyase; periplas 94.4 0.1 3.4E-06 57.1 8.8 91 421-539 378-470 (543)
238 2obi_A PHGPX, GPX-4, phospholi 94.4 0.043 1.5E-06 52.4 5.5 16 76-91 150-165 (183)
239 1nxc_A Mannosyl-oligosaccharid 94.4 0.066 2.3E-06 59.8 7.7 102 491-597 104-207 (478)
240 2qc7_A ERP31, ERP28, endoplasm 94.4 0.072 2.5E-06 54.2 7.4 70 5-87 14-94 (240)
241 1xvw_A Hypothetical protein RV 94.3 0.097 3.3E-06 48.4 7.6 39 71-114 111-156 (160)
242 2bmx_A Alkyl hydroperoxidase C 94.3 0.052 1.8E-06 52.6 5.9 21 71-91 122-147 (195)
243 3l4n_A Monothiol glutaredoxin- 94.2 0.091 3.1E-06 48.1 7.1 76 3-89 4-81 (127)
244 1t3b_A Thiol:disulfide interch 94.2 0.03 1E-06 55.5 4.1 32 71-112 177-208 (211)
245 3ctg_A Glutaredoxin-2; reduced 94.2 0.055 1.9E-06 49.5 5.6 76 4-89 28-105 (129)
246 2f8a_A Glutathione peroxidase 94.1 0.15 5.1E-06 50.3 9.0 17 75-91 172-188 (208)
247 3qmx_A Glutaredoxin A, glutare 94.1 0.11 3.7E-06 45.1 7.0 57 17-89 21-78 (99)
248 3gyk_A 27KDA outer membrane pr 94.0 0.12 4.2E-06 48.7 7.8 32 71-113 140-171 (175)
249 1dl2_A Class I alpha-1,2-manno 93.9 0.053 1.8E-06 61.0 5.9 103 491-598 98-208 (511)
250 1hcu_A Alpha-1,2-mannosidase; 93.8 0.44 1.5E-05 53.5 13.1 175 416-603 100-284 (503)
251 2g0d_A Nisin biosynthesis prot 93.8 0.78 2.7E-05 49.7 14.8 131 418-590 209-352 (409)
252 1r7h_A NRDH-redoxin; thioredox 93.8 0.079 2.7E-06 42.4 5.2 56 17-89 6-61 (75)
253 3kij_A Probable glutathione pe 93.8 0.19 6.5E-06 47.8 8.8 81 8-91 33-151 (180)
254 1zye_A Thioredoxin-dependent p 93.6 0.05 1.7E-06 54.1 4.5 22 71-92 136-163 (220)
255 3hd5_A Thiol:disulfide interch 93.5 0.22 7.5E-06 48.0 8.9 37 71-115 147-184 (195)
256 3ic4_A Glutaredoxin (GRX-1); s 93.5 0.08 2.7E-06 44.6 5.0 62 17-89 17-78 (92)
257 1wik_A Thioredoxin-like protei 93.5 0.1 3.6E-06 45.8 5.9 70 4-89 6-81 (109)
258 4gqc_A Thiol peroxidase, perox 93.5 0.18 6.2E-06 47.6 8.0 37 76-116 121-158 (164)
259 1xzo_A BSSCO, hypothetical pro 93.5 0.14 4.6E-06 47.9 7.0 19 73-91 133-151 (174)
260 2ri9_A Mannosyl-oligosaccharid 93.4 7.2 0.00025 43.4 21.9 280 241-607 80-413 (475)
261 1v58_A Thiol:disulfide interch 93.2 0.042 1.4E-06 55.6 3.2 37 71-113 195-231 (241)
262 2g0d_A Nisin biosynthesis prot 93.2 0.65 2.2E-05 50.3 12.9 145 451-598 153-314 (409)
263 1we0_A Alkyl hydroperoxide red 93.1 0.1 3.6E-06 49.9 5.7 17 75-91 118-134 (187)
264 1uul_A Tryparedoxin peroxidase 93.1 0.092 3.1E-06 51.1 5.4 18 75-92 126-143 (202)
265 2h01_A 2-Cys peroxiredoxin; th 93.1 0.032 1.1E-06 53.9 1.9 22 71-92 111-137 (192)
266 3h93_A Thiol:disulfide interch 93.0 0.15 5.2E-06 49.0 6.8 37 71-116 148-185 (192)
267 2klx_A Glutaredoxin; thioredox 93.0 0.097 3.3E-06 43.9 4.7 54 18-89 12-66 (89)
268 2v1m_A Glutathione peroxidase; 92.9 0.22 7.6E-06 46.1 7.5 17 75-91 132-148 (169)
269 1w6k_A Lanosterol synthase; cy 92.8 3 0.0001 49.0 18.5 83 208-297 406-502 (732)
270 2khp_A Glutaredoxin; thioredox 92.6 0.18 6E-06 42.4 5.8 57 17-89 11-67 (92)
271 1zof_A Alkyl hydroperoxide-red 92.5 0.11 3.8E-06 50.3 4.9 22 71-92 113-139 (198)
272 1qmv_A Human thioredoxin perox 92.3 0.19 6.6E-06 48.5 6.4 35 75-114 124-159 (197)
273 3ipz_A Monothiol glutaredoxin- 92.2 0.32 1.1E-05 42.8 7.2 70 4-89 9-84 (109)
274 2i81_A 2-Cys peroxiredoxin; st 92.1 0.14 4.6E-06 50.7 5.1 22 71-92 132-158 (213)
275 2hls_A Protein disulfide oxido 91.6 0.45 1.5E-05 48.0 8.4 60 12-82 24-93 (243)
276 2wci_A Glutaredoxin-4; redox-a 91.5 0.08 2.7E-06 49.0 2.5 71 3-89 25-101 (135)
277 3ztl_A Thioredoxin peroxidase; 91.3 0.21 7.3E-06 49.5 5.6 18 75-92 159-176 (222)
278 1ut9_A Cellulose 1,4-beta-cell 91.2 0.47 1.6E-05 54.7 9.1 85 419-521 291-381 (609)
279 2p31_A CL683, glutathione pero 91.2 0.11 3.7E-06 49.6 3.2 43 9-54 45-91 (181)
280 2jsy_A Probable thiol peroxida 91.2 0.42 1.4E-05 44.5 7.3 36 76-115 128-164 (167)
281 2wem_A Glutaredoxin-related pr 91.1 0.28 9.7E-06 44.1 5.6 71 3-89 10-87 (118)
282 3gkn_A Bacterioferritin comigr 91.1 0.68 2.3E-05 42.7 8.6 17 76-92 125-141 (163)
283 3zyw_A Glutaredoxin-3; metal b 90.8 0.57 1.9E-05 41.5 7.3 70 4-89 7-82 (111)
284 2gs3_A PHGPX, GPX-4, phospholi 90.5 0.36 1.2E-05 46.1 6.1 16 76-91 152-167 (185)
285 3gx8_A Monothiol glutaredoxin- 90.3 0.36 1.2E-05 43.5 5.7 69 4-89 7-85 (121)
286 3a2v_A Probable peroxiredoxin; 90.2 0.58 2E-05 47.7 7.7 37 75-115 123-159 (249)
287 2b7k_A SCO1 protein; metalloch 89.5 0.98 3.3E-05 43.7 8.5 15 77-91 146-160 (200)
288 1wzz_A Probable endoglucanase; 89.0 5.2 0.00018 42.4 14.2 180 384-596 17-201 (334)
289 1aba_A Glutaredoxin; electron 88.9 0.66 2.3E-05 38.6 5.9 61 17-90 5-77 (87)
290 3me7_A Putative uncharacterize 88.3 1.3 4.4E-05 41.6 8.2 16 75-90 126-141 (170)
291 3gzk_A Cellulase; fold from GH 88.3 2.8 9.7E-05 47.4 12.3 115 171-288 137-285 (537)
292 3hz8_A Thiol:disulfide interch 87.5 1.4 4.8E-05 42.5 8.1 33 71-114 150-182 (193)
293 2sqc_A Squalene-hopene cyclase 87.5 16 0.00056 41.9 18.3 131 154-297 330-487 (631)
294 2c0d_A Thioredoxin peroxidase 87.4 0.52 1.8E-05 46.9 5.0 18 75-92 145-162 (221)
295 3p7x_A Probable thiol peroxida 87.4 0.62 2.1E-05 43.5 5.3 35 76-114 129-164 (166)
296 2rem_A Disulfide oxidoreductas 86.4 2.1 7.3E-05 40.6 8.6 32 71-113 151-182 (193)
297 4g2e_A Peroxiredoxin; redox pr 85.9 1.2 4E-05 41.4 6.3 35 76-114 119-154 (157)
298 3ixr_A Bacterioferritin comigr 85.2 2.2 7.4E-05 40.4 7.9 17 76-92 141-157 (179)
299 3gv1_A Disulfide interchange p 84.8 0.76 2.6E-05 42.9 4.3 33 71-113 105-137 (147)
300 1t1v_A SH3BGRL3, SH3 domain-bi 84.8 0.85 2.9E-05 38.6 4.3 60 17-89 7-71 (93)
301 2znm_A Thiol:disulfide interch 84.7 1.7 5.9E-05 41.4 7.0 19 13-31 22-43 (195)
302 2i3y_A Epididymal secretory gl 84.0 4.9 0.00017 39.6 10.2 15 77-91 178-192 (215)
303 2r37_A Glutathione peroxidase 83.9 3.4 0.00012 40.4 8.9 15 77-91 160-174 (207)
304 2a4v_A Peroxiredoxin DOT5; yea 83.3 2.2 7.6E-05 39.2 6.9 20 71-91 107-132 (159)
305 2ct6_A SH3 domain-binding glut 82.3 0.91 3.1E-05 40.0 3.6 61 18-89 14-83 (111)
306 2wul_A Glutaredoxin related pr 81.9 1.6 5.5E-05 39.3 5.1 60 3-79 10-77 (118)
307 1nm3_A Protein HI0572; hybrid, 81.9 3 0.0001 41.4 7.7 57 17-90 175-231 (241)
308 3keb_A Probable thiol peroxida 81.8 3.2 0.00011 41.6 7.7 38 76-116 137-174 (224)
309 1clc_A Endoglucanase CELD; EC: 81.6 42 0.0015 38.6 18.1 163 414-593 195-378 (639)
310 1psq_A Probable thiol peroxida 80.3 1.9 6.5E-05 39.9 5.3 37 76-115 126-162 (163)
311 1gxm_A Pectate lyase; mechanis 80.1 1.6 5.5E-05 46.1 5.1 41 254-295 76-116 (332)
312 3uem_A Protein disulfide-isome 79.6 2.2 7.7E-05 44.9 6.2 58 19-87 144-205 (361)
313 3tjj_A Peroxiredoxin-4; thiore 77.8 2 6.8E-05 43.7 4.9 18 75-92 181-198 (254)
314 2jad_A Yellow fluorescent prot 76.2 2.1 7.3E-05 45.9 4.7 75 5-89 253-329 (362)
315 1wzz_A Probable endoglucanase; 75.8 6.4 0.00022 41.7 8.3 97 419-534 109-209 (334)
316 2yzh_A Probable thiol peroxida 75.7 2.1 7.1E-05 39.9 4.0 36 76-114 133-168 (171)
317 1w6k_A Lanosterol synthase; cy 75.6 23 0.00078 41.5 13.6 157 419-597 390-569 (732)
318 2xfg_A Endoglucanase 1; hydrol 75.2 55 0.0019 36.1 15.9 118 451-591 112-259 (466)
319 1n8j_A AHPC, alkyl hydroperoxi 75.1 4.7 0.00016 38.4 6.4 16 76-91 118-133 (186)
320 1r76_A Pectate lyase; A-helica 74.2 2.9 9.8E-05 45.5 5.1 41 254-295 151-194 (408)
321 1g87_A Endocellulase 9G; endog 73.7 62 0.0021 37.0 16.4 117 451-591 91-237 (614)
322 2z07_A Putative uncharacterize 73.7 18 0.00061 39.0 11.4 51 414-479 237-287 (420)
323 2okx_A Rhamnosidase B; alpha b 73.7 18 0.00062 43.7 12.5 113 413-539 625-751 (956)
324 4eo3_A Bacterioferritin comigr 71.3 9.5 0.00032 40.0 8.2 73 76-164 102-174 (322)
325 3qpm_A Peroxiredoxin; oxidored 71.0 5.4 0.00019 39.9 6.0 18 75-92 167-184 (240)
326 1ulv_A Glucodextranase; GH fam 70.2 63 0.0022 39.3 16.1 70 455-527 348-420 (1020)
327 3cih_A Putative alpha-rhamnosi 69.2 16 0.00056 42.7 10.5 111 414-538 382-508 (739)
328 2pn8_A Peroxiredoxin-4; thiore 69.2 4.7 0.00016 39.4 5.0 18 75-92 138-155 (211)
329 3zrd_A Thiol peroxidase; oxido 67.9 3.5 0.00012 39.9 3.7 34 76-113 165-199 (200)
330 2x8g_A Thioredoxin glutathione 67.8 7.5 0.00026 44.1 7.0 73 4-89 9-82 (598)
331 2jg0_A Periplasmic trehalase; 67.4 24 0.00084 39.6 11.0 94 415-530 305-402 (535)
332 1v5d_A Chitosanase; chitosan d 67.3 30 0.001 37.2 11.3 128 458-598 98-231 (386)
333 2yik_A Endoglucanase; hydrolas 67.3 64 0.0022 36.9 14.6 124 451-591 152-305 (611)
334 1ut9_A Cellulose 1,4-beta-cell 64.7 58 0.002 37.2 13.6 80 206-287 226-329 (609)
335 1v7w_A Chitobiose phosphorylas 63.0 33 0.0011 40.3 11.5 115 419-537 429-554 (807)
336 1v5d_A Chitosanase; chitosan d 63.0 11 0.00038 40.7 6.8 94 419-527 138-231 (386)
337 2okx_A Rhamnosidase B; alpha b 61.1 1.9E+02 0.0064 34.7 17.9 135 455-599 595-740 (956)
338 2z07_A Putative uncharacterize 60.4 28 0.00097 37.4 9.6 41 499-540 246-288 (420)
339 2h6f_B Protein farnesyltransfe 59.8 14 0.00049 40.5 7.1 119 157-299 75-195 (437)
340 2vn4_A Glucoamylase; hydrolase 59.8 1E+02 0.0034 35.1 14.4 92 419-526 190-291 (599)
341 3qde_A Cellobiose phosphorylas 59.4 65 0.0022 38.1 13.1 115 408-531 413-559 (811)
342 3a0o_A Oligo alginate lyase; a 59.2 1.9E+02 0.0066 33.6 17.2 27 255-281 209-235 (776)
343 1ulv_A Glucodextranase; GH fam 56.3 1.2E+02 0.0041 36.9 14.9 112 154-287 283-420 (1020)
344 3rrs_A Cellobiose phosphorylas 55.6 95 0.0032 36.8 13.6 59 455-515 382-445 (822)
345 1u6t_A SH3 domain-binding glut 55.5 12 0.00041 33.7 4.6 40 19-62 7-47 (121)
346 2wfc_A Peroxiredoxin 5, PRDX5; 55.4 9.1 0.00031 35.8 4.0 15 76-91 124-138 (167)
347 3ren_A Glycosyl hydrolase, fam 55.4 14 0.00049 39.3 5.9 120 458-597 82-202 (350)
348 3ren_A Glycosyl hydrolase, fam 54.4 27 0.00093 37.2 7.8 86 419-526 117-202 (350)
349 1wu4_A Xylanase Y; (alpla/alph 53.9 1.2E+02 0.0042 32.6 13.1 190 376-597 18-232 (396)
350 3uma_A Hypothetical peroxiredo 52.6 14 0.00047 35.3 4.8 35 76-112 149-183 (184)
351 4fxk_B Complement C4-A alpha c 52.0 3.1E+02 0.011 31.8 17.3 77 207-297 364-440 (767)
352 3rrs_A Cellobiose phosphorylas 50.5 85 0.0029 37.2 12.1 116 408-531 420-566 (822)
353 1hzf_A Complement factor C4A; 50.0 74 0.0025 33.6 10.6 115 156-288 92-227 (367)
354 1un2_A DSBA, thiol-disulfide i 49.8 5.3 0.00018 38.8 1.4 45 13-57 113-160 (197)
355 2v2g_A Peroxiredoxin 6; oxidor 47.1 25 0.00086 34.9 5.9 37 75-115 126-162 (233)
356 3qde_A Cellobiose phosphorylas 47.0 1.9E+02 0.0066 34.1 14.4 59 455-515 375-438 (811)
357 4acq_A Alpha-2-macroglobulin; 46.6 1.3E+02 0.0046 37.9 13.7 80 208-297 980-1059(1451)
358 3cu7_A Complement C5; Mg domai 46.5 5.1E+02 0.018 33.1 19.3 76 208-296 1044-1119(1676)
359 1prx_A HORF6; peroxiredoxin, h 46.3 63 0.0022 31.6 8.7 36 76-115 131-166 (224)
360 4fnv_A Heparinase III protein, 45.8 1.3E+02 0.0043 35.0 12.4 91 417-531 261-359 (702)
361 3t72_q RNA polymerase sigma fa 45.7 52 0.0018 28.3 6.9 29 371-399 41-69 (99)
362 1qqf_A Protein (complement C3D 45.5 23 0.00077 35.9 5.4 79 206-297 33-111 (277)
363 1kwf_A Endoglucanase A; hydrol 43.9 1.7E+02 0.0059 31.0 12.2 124 458-597 82-214 (363)
364 1h12_A Endo-1,4-beta-xylanase; 42.9 68 0.0023 34.7 8.9 123 458-596 97-237 (405)
365 1qqf_A Protein (complement C3D 42.2 2.7E+02 0.0092 27.7 13.2 121 156-289 39-172 (277)
366 1r76_A Pectate lyase; A-helica 42.1 3E+02 0.01 29.8 13.6 74 493-576 150-226 (408)
367 1h12_A Endo-1,4-beta-xylanase; 41.6 40 0.0014 36.5 6.8 94 419-534 147-245 (405)
368 1kwf_A Endoglucanase A; hydrol 41.5 41 0.0014 35.9 6.8 93 419-528 123-216 (363)
369 3qxf_A Endoglucanase; cellulas 41.4 33 0.0011 36.6 6.0 75 458-532 53-135 (355)
370 2wy7_A Complement C3D fragment 41.1 28 0.00097 35.9 5.4 78 207-297 50-127 (310)
371 1gai_A Glucoamylase-471; hydro 41.1 3.6E+02 0.012 29.6 14.5 47 419-480 189-235 (472)
372 2a6h_F RNA polymerase sigma fa 40.3 47 0.0016 36.1 7.2 64 324-409 353-422 (423)
373 2fba_A Glucoamylase Glu1; (alp 40.0 2E+02 0.0068 31.8 12.4 190 206-527 88-330 (492)
374 1tty_A Sigma-A, RNA polymerase 39.4 57 0.002 26.8 6.1 55 323-399 10-68 (87)
375 3mng_A Peroxiredoxin-5, mitoch 38.3 27 0.00092 32.9 4.3 36 75-112 137-172 (173)
376 1xcc_A 1-Cys peroxiredoxin; un 38.2 45 0.0016 32.5 6.2 36 76-115 128-163 (220)
377 3qxf_A Endoglucanase; cellulas 38.0 46 0.0016 35.4 6.4 89 419-526 98-190 (355)
378 1nm3_A Protein HI0572; hybrid, 37.2 39 0.0013 33.1 5.5 16 75-91 124-139 (241)
379 3q7a_B Farnesyltransferase bet 37.0 1.9E+02 0.0066 32.3 11.5 27 152-179 106-132 (520)
380 2wy7_A Complement C3D fragment 36.7 3.5E+02 0.012 27.4 13.5 121 156-289 55-188 (310)
381 2pwj_A Mitochondrial peroxired 36.7 29 0.001 32.3 4.3 16 12-27 42-61 (171)
382 2sqc_A Squalene-hopene cyclase 36.7 71 0.0024 36.5 8.3 95 418-536 314-417 (631)
383 2p0v_A Hypothetical protein BT 35.1 2.7E+02 0.0092 30.8 12.1 113 490-602 178-319 (489)
384 2axo_A Hypothetical protein AT 33.0 53 0.0018 33.6 5.8 63 19-90 51-126 (270)
385 1hzf_A Complement factor C4A; 32.8 71 0.0024 33.8 7.0 77 207-297 87-163 (367)
386 2jg0_A Periplasmic trehalase; 32.3 46 0.0016 37.4 5.6 49 492-540 306-361 (535)
387 3f4s_A Alpha-DSBA1, putative u 32.2 24 0.00083 34.8 3.0 21 71-91 167-187 (226)
388 1wu4_A Xylanase Y; (alpla/alph 31.2 67 0.0023 34.6 6.5 101 419-534 131-239 (396)
389 2o8x_A Probable RNA polymerase 31.0 41 0.0014 25.8 3.7 29 371-399 33-61 (70)
390 3hug_A RNA polymerase sigma fa 30.7 44 0.0015 27.6 4.0 30 371-400 55-84 (92)
391 1q98_A Thiol peroxidase, TPX; 30.3 21 0.00073 32.7 2.1 34 76-113 130-164 (165)
392 1v7w_A Chitobiose phosphorylas 30.3 3.3E+02 0.011 31.7 12.8 51 418-480 505-558 (807)
393 3tdg_A DSBG, putative uncharac 29.9 29 0.001 35.6 3.2 28 11-44 145-175 (273)
394 3gkx_A Putative ARSC family re 29.5 25 0.00087 31.2 2.3 60 16-89 8-68 (120)
395 1l9z_H Sigma factor SIGA; heli 29.3 52 0.0018 36.1 5.2 53 324-398 368-424 (438)
396 1s3c_A Arsenate reductase; ARS 29.1 18 0.00062 33.2 1.3 61 16-90 6-67 (141)
397 1tp9_A Peroxiredoxin, PRX D (t 28.5 37 0.0013 31.0 3.4 16 76-92 128-143 (162)
398 3cih_A Putative alpha-rhamnosi 26.8 84 0.0029 36.6 6.8 56 417-484 456-514 (739)
399 4gl3_A Putative glucoamylase; 26.3 2E+02 0.0067 31.3 9.1 92 419-525 58-163 (424)
400 2p7v_B Sigma-70, RNA polymeras 26.2 41 0.0014 26.1 2.8 29 371-399 27-55 (68)
401 2p0v_A Hypothetical protein BT 25.6 3.7E+02 0.013 29.8 11.1 103 419-532 183-324 (489)
402 1n4q_B Geranyltransferase type 25.4 1.7E+02 0.0059 31.2 8.4 123 157-303 69-218 (377)
403 3l9v_A Putative thiol-disulfid 25.0 25 0.00085 33.3 1.5 36 19-54 23-58 (189)
404 1ku3_A Sigma factor SIGA; heli 24.9 67 0.0023 25.2 3.9 28 371-398 32-59 (73)
405 3c68_A Uncharacterized protein 24.8 75 0.0026 37.3 5.8 44 497-540 561-608 (761)
406 3p2c_A Putative glycosyl hydro 24.7 4.8E+02 0.016 28.6 11.7 112 491-602 162-301 (463)
407 1g9g_A Cellulase CEL48F; proce 24.5 6.3E+02 0.022 28.2 12.4 112 254-473 415-537 (629)
408 1z3e_A Regulatory protein SPX; 24.3 43 0.0015 30.0 2.9 59 17-89 6-65 (132)
409 1tf4_A T. fusca endo/EXO-cellu 24.2 4.5E+02 0.016 29.7 12.1 65 229-298 49-117 (605)
410 2jpc_A SSRB; DNA binding prote 24.1 77 0.0026 23.6 4.0 29 371-399 15-43 (61)
411 3fz4_A Putative arsenate reduc 23.8 37 0.0013 30.1 2.3 59 17-89 8-67 (120)
412 3sbc_A Peroxiredoxin TSA1; alp 23.1 1.4E+02 0.0046 29.4 6.5 36 76-115 143-178 (216)
413 3qt9_A Putative uncharacterize 23.1 5.4E+02 0.019 27.9 11.7 112 491-602 134-273 (427)
414 2dbs_A Hypothetical protein TT 22.2 71 0.0024 26.2 3.4 53 37-90 23-75 (90)
415 3q6o_A Sulfhydryl oxidase 1; p 22.1 65 0.0022 31.4 4.0 21 71-91 201-221 (244)
416 1z6m_A Conserved hypothetical 21.3 52 0.0018 30.2 3.0 14 19-32 36-49 (175)
417 3qry_B Putative uncharacterize 21.2 5.6E+02 0.019 27.8 11.3 111 491-602 133-273 (426)
418 3c68_A Uncharacterized protein 20.8 1.2E+02 0.0043 35.4 6.6 51 417-479 554-607 (761)
419 1gxm_A Pectate lyase; mechanis 20.7 6.5E+02 0.022 26.3 11.4 74 493-576 75-148 (332)
420 3mzy_A RNA polymerase sigma-H 20.7 80 0.0027 28.0 4.1 30 371-400 126-155 (164)
421 3l78_A Regulatory protein SPX; 20.4 44 0.0015 29.5 2.1 61 16-90 4-65 (120)
No 1
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=100.00 E-value=2.4e-35 Score=325.43 Aligned_cols=336 Identities=10% Similarity=-0.026 Sum_probs=251.8
Q ss_pred HHHHHHHHH-hcccccCCCCCC------CCCCCChhHHHH----HHHhhhhhcccCCCCCCHHHHHHHHHHHHHHHhCCC
Q 005023 157 LRLCAEQLS-KSYDSRFGGFGS------APKFPRPVEIQM----MLYHSKKLEDTGKSGEASEGQKMVLFTLQCMAKGGI 225 (718)
Q Consensus 157 ~~~~~~~l~-~~~D~~~GGfg~------apKFP~~~~l~~----Ll~~~~~~~~~~~~~~~~~~~~~~~~TL~~m~~gGi 225 (718)
++.++.+|. ..+|+++|||++ .|| |.+..+.+ |+.++....... ..+++..+++|.+|++.|.+++
T Consensus 19 ~~~~l~~w~~~~~D~~~GGf~~~~~~dg~~~-~~~k~l~~nar~l~~~a~a~~~~~-~~~~~~~l~~A~~~~~fl~~~~- 95 (402)
T 1fp3_A 19 LDRVMAFWLEHSHDREHGGFFTCLGRDGRVY-DDLKYVWLQGRQVWMYCRLYRKLE-RFHRPELLDAAKAGGEFLLRHA- 95 (402)
T ss_dssp HHHHHHHHHHHSBCTTTSSBCCCBCTTSCBS-CCCEEHHHHHHHHHHHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHhhccCCCCCCCCEeeEECCCCCCC-CCccchhhhHHHHHHHHHHHHHhc-ccCCHHHHHHHHHHHHHHHHhc-
Confidence 467788898 799999999976 788 76654544 555543221100 0135899999999999999966
Q ss_pred cccCCC-cEEEEecCCCCCCCCCcchHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHhcc-CCCCceeeeccCCc
Q 005023 226 HDHVGG-GFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMI-GPGGEIFSAEDADS 303 (718)
Q Consensus 226 ~D~v~G-GF~RYsvD~~W~vPHFEKmLyDnA~ll~~ya~Ay~~t~~~~y~~~A~~~~~~l~~~m~-~p~Ggf~sa~DADs 303 (718)
+|+.|| ||| ||+|.+|.+||++|||||||+++.+|+++|++|+++.|++.|+++++++++++. +++| +|++.|++.
T Consensus 96 ~d~~gg~g~~-~s~d~dg~~~~~~~~lyd~af~~~a~~~~~~atgd~~~~~~A~~l~~~~~~~~~d~~~G-~f~~~~~~~ 173 (402)
T 1fp3_A 96 RVAPPEKKCA-FVLTRDGRPVKVQRSIFSECFYTMAMNELWRVTAEARYQSEAVDMMDQIVHWVREDPSG-LGRPQLPGA 173 (402)
T ss_dssp BSSTTSCCBC-SEECTTSCEEECCSSSHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTCGGG-GCCCCCTTS
T ss_pred cCcCCCCceE-EEECCCCCccccccchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhccCCCc-ccCccccCc
Confidence 999988 999 899999999999999999999999999999999999999999999999999998 6655 567666542
Q ss_pred ccccCcccccCCceEeechHHHHHHhchhHHHHHH---HhcccCCCCcCCCCCCCCCCccCCcceeeccCCchHHHHhcC
Q 005023 304 AETEGATRKKEGAFYVWTSKEVEDILGEHAILFKE---HYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLG 380 (718)
Q Consensus 304 ~~~~~~~~~~EG~yY~Wt~~Ei~~~L~~~~~~~~~---~~~v~~~Gn~~~~~~~dp~~~~eg~nvL~~~~~~~~~a~~~g 380 (718)
.+ .+|. + ..-.....+.+ .+.+++++
T Consensus 174 ~~-------~~~~----~------~~m~~~~~~l~l~~l~~~~~~~---------------------------------- 202 (402)
T 1fp3_A 174 VA-------SESM----A------VPMMLLCLVEQLGEEDEELAGR---------------------------------- 202 (402)
T ss_dssp CC-------EEET----H------HHHHHHHHHHHHHTTCHHHHHH----------------------------------
T ss_pred cC-------CCCc----c------hHHHHHHHHHHHHHHHHhcCcH----------------------------------
Confidence 11 0000 0 00001112222 22222110
Q ss_pred CCHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhch----HH--------H---HHHHHHHHHHHhhhhhhhhcccCCC
Q 005023 381 MPLEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSW----NG--------L---VISSFARASKILKSEAESAMFNFPV 445 (718)
Q Consensus 381 ~~~~~~~~~l~~~r~~L~~~R~~R~~P~~Ddkilt~W----Ng--------l---~I~ALa~A~~~~~d~~~~~~~~~~~ 445 (718)
-.+.+++.++.++++ ++.|.+|..+++|. +| |. . ..+.|+++++++++
T Consensus 203 -~~~~a~~~~~~~~~~-~~~~~~~~~e~~d~----dw~~~~~~~g~~~~pgh~ie~~wlL~~a~~~~~~----------- 265 (402)
T 1fp3_A 203 -YAQLGHWCARRILQH-VQRDGQAVLENVSE----DGEELSGCLGRHQNPGHALEAGWFLLRHSSRSGD----------- 265 (402)
T ss_dssp -THHHHHHHHHHHHTT-EETTTTEECSEEET----TSCBCCHHHHHEECHHHHHHHHHHHHHHHHHTTC-----------
T ss_pred -HHHHHHHHHHHHHHH-hCcCCCeEEEEECC----CCCccCCCCCCCCCCCcHHHHHHHHHHHHHHcCC-----------
Confidence 024566777888888 88899999999885 36 22 1 34489999999998
Q ss_pred CCCChHHHHHHHHHHHHHH-HHhccccCCCeEEEe-ecCCCCC-----CCCCcccHHHHHHHHHHHHHHcCChHHHHHHH
Q 005023 446 VGSDRKEYMEVAESAASFI-RRHLYDEQTHRLQHS-FRNGPSK-----APGFLDDYAFLISGLLDLYEFGSGTKWLVWAI 518 (718)
Q Consensus 446 ~~~~~~~~l~~A~~~~~~l-~~~~~d~~~g~l~~~-~~~g~~~-----~~~~l~DyA~li~all~LYeaTgd~~~L~~A~ 518 (718)
++|++.|+++++++ .+++|+++.|+++++ +.+|.+. ....++.+|.+|.|++.||++|||++||++|.
T Consensus 266 -----~~~l~~A~~~~~~~~~~~~~d~~~gg~~~~~~~~g~~~~~l~d~~~~~W~qaea~~a~l~ly~~tgd~~yl~~a~ 340 (402)
T 1fp3_A 266 -----AKLRAHVIDTFLLLPFRSGWDADHGGLFYFQDADGLCPTQLEWAMKLWWPHSEAMIAFLMGYSESGDPALLRLFY 340 (402)
T ss_dssp -----HHHHHHHHHHHTHHHHHHHBCTTTCSBCSCEETTSCCCSSTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred -----hHHHHHHHHHHHHHHHHHhccCCCCCEEEeecCCCCccccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 89999999999999 999999765667665 6777752 22334455688999999999999999999999
Q ss_pred HHHHHHHHhcccccCCccccCCCCCCccccccccCCCCCCCChHHHHHHHHHH
Q 005023 519 ELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVR 571 (718)
Q Consensus 519 ~L~~~~~~~F~D~~~Gg~f~t~~~~~~l~~r~k~~~D~a~PS~ns~~a~~Llr 571 (718)
++++.+.++|+|+++|+||++...+..+....|. .-+.+|.+|..|+..+++
T Consensus 341 ~~~~~~~~~f~D~~~G~w~~~~~~~g~~~~~~k~-~~~k~~yH~~r~~~~~~~ 392 (402)
T 1fp3_A 341 QVAEYTFRQFRDPEYGEWFGYLNREGKVALTIKG-GPFKGCFHVPRCLAMCEE 392 (402)
T ss_dssp HHHHHHHHHTBCTTTSSBCCEECTTSCEEECCSS-CSSCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHhCcCCCCCceEeeECCCcCCCCCCCC-CCCCCCCccHHHHHHHHH
Confidence 9999999999999999999987766655544333 356789999987765543
No 2
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=100.00 E-value=2.2e-34 Score=315.68 Aligned_cols=252 Identities=12% Similarity=0.043 Sum_probs=200.6
Q ss_pred HHHHHHHhCCCcccCCCcE-EEEecCCCCCCCCCcchHHHHHHHHHHHHHHHHc-cCChHHHHHHHHHHHHHHHhccCCC
Q 005023 215 FTLQCMAKGGIHDHVGGGF-HRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSL-TKDVFYSYICRDILDYLRRDMIGPG 292 (718)
Q Consensus 215 ~TL~~m~~gGi~D~v~GGF-~RYsvD~~W~vPHFEKmLyDnA~ll~~ya~Ay~~-t~~~~y~~~A~~~~~~l~~~m~~p~ 292 (718)
..|.-- ...++|| +||| +||++|.. .+|| ||||||||++|++|++||++ ++++.|+++|+++++||+++|++++
T Consensus 19 ~~l~fw-~~~~~D~-~GGf~~~~~~d~~-~~~~-eK~l~~nar~i~~~a~a~~~~~~~~~~~~~A~~~~~~l~~~~~~~~ 94 (388)
T 2gz6_A 19 DVLPFW-ENHSLDS-EGGYFTCLDRQGK-VYDT-DKFIWLQNRQVWTFSMLCNQLEKRENWLKIARNGAKFLAQHGRDDE 94 (388)
T ss_dssp THHHHH-HHHCBCT-TSSBCCEEBTTSC-EEEC-CEEHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHSBCTT
T ss_pred hHHHHH-HhcCCCC-CCCEEeEECCCCC-cCCc-chhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCCCC
Confidence 344433 3368999 9995 79999998 8898 99999999999999999999 8999999999999999999999999
Q ss_pred CceeeeccCCcccccCcccccCCceEeechHHHHHHhchhHHHHHHHhcccCCCCcCCCCCCCCCCccCCcceeeccCCc
Q 005023 293 GEIFSAEDADSAETEGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDS 372 (718)
Q Consensus 293 Ggf~sa~DADs~~~~~~~~~~EG~yY~Wt~~Ei~~~L~~~~~~~~~~~~v~~~Gn~~~~~~~dp~~~~eg~nvL~~~~~~ 372 (718)
||||+++|+|+.+
T Consensus 95 Gg~~~~~d~dg~~------------------------------------------------------------------- 107 (388)
T 2gz6_A 95 GNWYFALTRGGEP------------------------------------------------------------------- 107 (388)
T ss_dssp SCBCSEECTTSCB-------------------------------------------------------------------
T ss_pred CCEEEEEcCCCCc-------------------------------------------------------------------
Confidence 9999999988621
Q ss_pred hHHHHhcCCCHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhchHHHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHH
Q 005023 373 SASASKLGMPLEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLVISSFARASKILKSEAESAMFNFPVVGSDRKE 452 (718)
Q Consensus 373 ~~~a~~~g~~~~~~~~~l~~~r~~L~~~R~~R~~P~~Ddkilt~WNgl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~ 452 (718)
+|++..+.+||++|.||+++++++++ ++
T Consensus 108 ------------------------------------~~~~~~~~~~af~i~al~~~y~~tg~----------------~~ 135 (388)
T 2gz6_A 108 ------------------------------------LVQPYNIFSDCFAAMAFSQYALASGE----------------EW 135 (388)
T ss_dssp ------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHCC----------------HH
T ss_pred ------------------------------------ccCCcchHHHHHHHHHHHHHHHHhCC----------------HH
Confidence 01112344799999999999999998 89
Q ss_pred HHHHHHHHHHHHHHhccccCCCeEEEeecCCCCCCCCCcccHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhccccc
Q 005023 453 YMEVAESAASFIRRHLYDEQTHRLQHSFRNGPSKAPGFLDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDRE 532 (718)
Q Consensus 453 ~l~~A~~~~~~l~~~~~d~~~g~l~~~~~~g~~~~~~~l~DyA~li~all~LYeaTgd~~~L~~A~~L~~~~~~~F~D~~ 532 (718)
|++.|++++++|.++++++ +|.+.+.+.++.+ ..+ ++++++++.++++||++|+|++|++.|.++++.+.++|+|++
T Consensus 136 ~l~~A~~~~~~i~~~~~d~-~g~~~~~~~~~~~-~~~-~~~~~~~~~all~l~~~t~d~~~~~~A~~~~~~~~~~~~~~~ 212 (388)
T 2gz6_A 136 AKDVAMQAYNNVLRRKDNP-KGKYTKTYPGTRP-MKA-LAVPMILANLTLEMEWLLPQETLENVLAATVQEVMGDFLDQE 212 (388)
T ss_dssp HHHHHHHHHHHHHTC---------------CCC-CEE-THHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHTTEETT
T ss_pred HHHHHHHHHHHHHHHhcCC-CcccCcccCCCCC-CCC-CCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhccC
Confidence 9999999999999999875 4554444554442 333 889999999999999999999999999999999999999988
Q ss_pred CCccccCCCCCCccccccccCCCCCCCChHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHH
Q 005023 533 GGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAGSKSDYYRQNAEHSLAVFET 597 (718)
Q Consensus 533 ~Gg~f~t~~~~~~l~~r~k~~~D~a~PS~ns~~a~~LlrL~~lt~~~~~~~y~e~a~~~l~~~~~ 597 (718)
+|++......+...+ .++..|...||+|+.++.+|++++.+||+ +.|++.|++++..+..
T Consensus 213 ~g~~~e~~~~~w~~~--~~~~~~~~~pgh~~e~a~lL~~~~~~tgd---~~~~~~A~~~~~~~~~ 272 (388)
T 2gz6_A 213 QGLMYENVAPDGSHI--DCFEGRLINPGHGIEAMWFIMDIARRKND---SKTINQAVDVVLNILN 272 (388)
T ss_dssp TTEECSEECTTSCCC--CSTTTTEECHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCC--CCcccCcCCCCHHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHHH
Confidence 887632211122222 44556789999999999999999999985 8999999999988753
No 3
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=100.00 E-value=1.2e-32 Score=306.15 Aligned_cols=305 Identities=13% Similarity=0.036 Sum_probs=247.4
Q ss_pred HHHHHHHHHhcccccCCCCCC-------CCCCCChhHHHH-HHH-hhhhhcccCCCCCCHHHHHHHHHHHHHHHhCCCcc
Q 005023 157 LRLCAEQLSKSYDSRFGGFGS-------APKFPRPVEIQM-MLY-HSKKLEDTGKSGEASEGQKMVLFTLQCMAKGGIHD 227 (718)
Q Consensus 157 ~~~~~~~l~~~~D~~~GGfg~-------apKFP~~~~l~~-Ll~-~~~~~~~~~~~~~~~~~~~~~~~TL~~m~~gGi~D 227 (718)
+..++.++...+|++ ||+. .|.++.-..++- ++. +..... .+++..+++|.+|++.|.++ ++|
T Consensus 17 ~~~ll~f~~~~~d~~--GF~~ld~~g~~~~~~~k~~~~nar~i~~~a~a~~-----~g~~~~l~~A~~~~~fl~~~-~~D 88 (421)
T 2zbl_A 17 TDRIFNFGKNAVVPT--GFGWLGNKGQIKEEMGTHLWITARMLHVYSVAAS-----MGRPGAYDLVDHGIKAMNGA-LRD 88 (421)
T ss_dssp HHHHHHHHGGGEETT--EECCBCTTSCBCGGGCEEHHHHHHHHHHHHHHHH-----TTCTTHHHHHHHHHHHHTTT-TBC
T ss_pred HHHHHHHHHhCcCCC--CcceECCCCCCCCCchhhHHHHHHHHHHHHHHHH-----cCChhHHHHHHHHHHHHHHh-ccC
Confidence 344556777888998 6853 355555444442 222 222111 23578999999999999996 999
Q ss_pred cCCCcEEEEecCCCCCCCCCcchHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHhccCC-CCceeeeccCCcccc
Q 005023 228 HVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMIGP-GGEIFSAEDADSAET 306 (718)
Q Consensus 228 ~v~GGF~RYsvD~~W~vPHFEKmLyDnA~ll~~ya~Ay~~t~~~~y~~~A~~~~~~l~~~m~~p-~Ggf~sa~DADs~~~ 306 (718)
+.+|||| ||+|++|.+|| ||||||||+++.+|++ |++|+++.|++.|+++++++.++|+++ +||||++.|+|+.+
T Consensus 89 ~~~GG~~-~s~d~dg~~~~-~k~lyd~Af~i~al~~-~~~tg~~~~l~~a~~~~~~l~~~~~d~~~Ggf~~~~d~d~~~- 164 (421)
T 2zbl_A 89 KKYGGWY-ACVNDQGVVDA-SKQGYQHFFALLGAAS-AVTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFSQ- 164 (421)
T ss_dssp TTTSSBC-SEEETTEEEEC-CEEHHHHHHHHHHHHH-HHTTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTTSCS-
T ss_pred cCCCeEE-EEeCCCCCcCC-chhHHHHHHHHHHHHH-HHHhCCccHHHHHHHHHHHHHHHhccCCCCCeeeeecCCCCc-
Confidence 9999999 99999999999 9999999999999999 999999999999999999999999998 79999999998731
Q ss_pred cCcccccCCceEeechHHHHHHhchhHHHHHHHhcccCCCCcCCCCCCCCCCccCCcceeeccCCchHHHHhcCCCHHHH
Q 005023 307 EGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLEKY 386 (718)
Q Consensus 307 ~~~~~~~EG~yY~Wt~~Ei~~~L~~~~~~~~~~~~v~~~Gn~~~~~~~dp~~~~eg~nvL~~~~~~~~~a~~~g~~~~~~ 386 (718)
.| +
T Consensus 165 ------~~-----------------------------------------------~------------------------ 167 (421)
T 2zbl_A 165 ------TE-----------------------------------------------D------------------------ 167 (421)
T ss_dssp ------BC-----------------------------------------------S------------------------
T ss_pred ------cc-----------------------------------------------c------------------------
Confidence 10 0
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCchhhhchHHHH--HHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHH
Q 005023 387 LNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLV--ISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFI 464 (718)
Q Consensus 387 ~~~l~~~r~~L~~~R~~R~~P~~Ddkilt~WNgl~--I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l 464 (718)
...||+.| +.+|+++++++++ ++|++.|+++++++
T Consensus 168 ---------------------------~~~~n~~m~~~~al~~l~~~tgd----------------~~~~~~A~~~~~~~ 204 (421)
T 2zbl_A 168 ---------------------------YRGGNANMHAVEAFLIVYDVTHD----------------KKWLDRALRIASVI 204 (421)
T ss_dssp ---------------------------CEEHHHHHHHHHHHHHHHHTTCC----------------THHHHHHHHHHHHH
T ss_pred ---------------------------cCCCcHHHHHHHHHHHHHHhhCC----------------HHHHHHHHHHHHHH
Confidence 02488866 9999999999998 78999999999999
Q ss_pred HHhccccCCCeEEEeecCCCCCCCCC-ccc-----------HHHH---HHHHHHHHHHc---CC--h-HHHHHHHHHHHH
Q 005023 465 RRHLYDEQTHRLQHSFRNGPSKAPGF-LDD-----------YAFL---ISGLLDLYEFG---SG--T-KWLVWAIELQNT 523 (718)
Q Consensus 465 ~~~~~d~~~g~l~~~~~~g~~~~~~~-l~D-----------yA~l---i~all~LYeaT---gd--~-~~L~~A~~L~~~ 523 (718)
..++.++.+|++.+.+.++.....++ ++| |++. ++.|+++|+++ ++ + .|++.|+++++.
T Consensus 205 ~~~~~~~~~~~l~~~f~~~~~~~~~~~~dd~~~r~~~~~~~pgh~iE~~wlLl~~~~~~~~~~~~~~~~~l~~A~~l~~~ 284 (421)
T 2zbl_A 205 IHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHA 284 (421)
T ss_dssp CCCCCGGGTTCCCCEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHH
T ss_pred HHHhccCCCCchhhhcCCccccchhccCCCcccccccCCCCCChHHHHHHHHHHHHHHcccccccchHHHHHHHHHHHHH
Confidence 99998866678887777664434343 555 8887 77899999999 56 5 899999999999
Q ss_pred HHHhccccc-CCccccCCCCCCccccccccCCCCCCCChHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHhh
Q 005023 524 QDELFLDRE-GGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAGSKSDYYRQNAEHSLAVFETRLKDM 602 (718)
Q Consensus 524 ~~~~F~D~~-~Gg~f~t~~~~~~l~~r~k~~~D~a~PS~ns~~a~~LlrL~~lt~~~~~~~y~e~a~~~l~~~~~~i~~~ 602 (718)
+.+++||++ .||+|.+...++.++.|.|.. ..|+.++.+|++|+++||+ +.|.+.++++++.+...+...
T Consensus 285 ~~~~g~d~~~~GG~~~~~~~~g~~~~~~k~~------w~~aea~~all~l~~~tgd---~~yl~~a~~~~~~~~~~~~d~ 355 (421)
T 2zbl_A 285 TIRDAWAPDGADGFVYSVDWDGKPIVRERVR------WPIVEAMGTAYALYTLTDD---SQYEEWYQKWWDYCIKYLMDY 355 (421)
T ss_dssp HHHHHBSCSSSSSBCSCBCTTSCBSCCCEEH------HHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHTBCT
T ss_pred HHHHhcCCCCCCcEEEeecCCCCccCCCccc------HHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHhCCCC
Confidence 999999988 678777766556666666655 4589999999999999996 899999999999998877654
No 4
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=100.00 E-value=1.3e-33 Score=277.04 Aligned_cols=139 Identities=42% Similarity=0.876 Sum_probs=133.4
Q ss_pred chhHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCc
Q 005023 2 GRRSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPL 78 (718)
Q Consensus 2 ~~~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~ 78 (718)
+++++++|++++||||+ ++||||||+|++++|++++|++.+|++||.||||+|++|++++.||.++|+++|++|||+
T Consensus 28 ~~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g~Pt 107 (173)
T 3ira_A 28 GEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPDIDNIYMTVCQIILGRGGWPL 107 (173)
T ss_dssp SHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCHHHHHHHHHHHHHHHSCCCSSE
T ss_pred CHHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcccCcHHHHHHHHHHHHcCCCCCcc
Confidence 57899999999999965 699999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCceeecccccCCCCCCCcccHHHHHHHHHHHHhhcHHHHHHHHHHHHHHHHHHhh
Q 005023 79 SVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRKVKDAWDKKRDMLAQSGAFAIEQLSEALS 140 (718)
Q Consensus 79 ~vfl~p~g~p~~~~~y~p~~~~~~~~~f~~~L~~i~~~w~~~~~~~~~~a~~~~~~l~~~~~ 140 (718)
+||++|+|+|++++||+|+++.+++++|+++|++|.+.|+++|++|.+.|.+|+++|++...
T Consensus 108 ~v~l~~dG~~v~~~ty~p~~~~~~~~~f~~~L~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (173)
T 3ira_A 108 NIIMTPGKKPFFAGTYIPKNTRFNQIGMLELVPRIKEIWEQQHEEVLDSAEKITSTIQEMIK 169 (173)
T ss_dssp EEEECTTSCEEEEESSCCSSCBTTBCCHHHHHHHHHHHHHHSHHHHHHHHHHTCSHHHHHHH
T ss_pred eeeECCCCCceeeeeeCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999987544
No 5
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=99.93 E-value=6.6e-25 Score=242.51 Aligned_cols=259 Identities=15% Similarity=0.100 Sum_probs=196.7
Q ss_pred HHHHHHHHHHHhCCCcccCCCcEEEEecCCCCC-CCCCcchHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHhcc
Q 005023 211 KMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWH-VPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMI 289 (718)
Q Consensus 211 ~~~~~TL~~m~~gGi~D~v~GGF~RYsvD~~W~-vPHFEKmLyDnA~ll~~ya~Ay~~t~~~~y~~~A~~~~~~l~~~m~ 289 (718)
..+...|.--...+ .| .+|||+.+ .|.+|. +||+||||++||++|++|+.||++++++.|+++|+++++||.++|+
T Consensus 13 ~~~~~~l~fw~~~~-~D-~~GGf~~~-l~~dg~~~~~~~k~l~~n~r~i~~~a~a~~~~g~~~~l~~A~~~~~fl~~~~~ 89 (402)
T 3gt5_A 13 THISDTMAFYHPRC-ID-SAGGFFHY-FRDDGSIYNATHRHLVSSTRFVFNYAMAYLQFGTAEYLDAVHHGLSYVRDVHR 89 (402)
T ss_dssp HHHHHHHHHHTTTT-BC-TTSSBCCE-ECTTSCEEESSEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTB
T ss_pred HHHHHHHHHHHhcC-CC-CCcCeeeE-ECCCCCCCCCCchhHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHhCc
Confidence 34455555544333 57 58999963 344454 7999999999999999999999999999999999999999999999
Q ss_pred CCC-CceeeeccCCcccccCcccccCCceEeechHHHHHHhchhHHHHHHHhcccCCCCcCCCCCCCCCCccCCcceeec
Q 005023 290 GPG-GEIFSAEDADSAETEGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIE 368 (718)
Q Consensus 290 ~p~-Ggf~sa~DADs~~~~~~~~~~EG~yY~Wt~~Ei~~~L~~~~~~~~~~~~v~~~Gn~~~~~~~dp~~~~eg~nvL~~ 368 (718)
+++ ||||++. .|..+.
T Consensus 90 d~~~Gg~~~~~-~dG~~~-------------------------------------------------------------- 106 (402)
T 3gt5_A 90 NPATGGYAWTL-CDDRVE-------------------------------------------------------------- 106 (402)
T ss_dssp CTTTSCBCSEE-ETTEEE--------------------------------------------------------------
T ss_pred cCCCCcEEEEe-eCCCCC--------------------------------------------------------------
Confidence 998 9999987 443110
Q ss_pred cCCchHHHHhcCCCHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhchHHHHHHHHHHHHHHhhhhhhhhcccCCCCCC
Q 005023 369 LNDSSASASKLGMPLEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLVISSFARASKILKSEAESAMFNFPVVGS 448 (718)
Q Consensus 369 ~~~~~~~a~~~g~~~~~~~~~l~~~r~~L~~~R~~R~~P~~Ddkilt~WNgl~I~ALa~A~~~~~d~~~~~~~~~~~~~~ 448 (718)
|....+..++++|.||++ +.++++
T Consensus 107 -----------------------------------------~~~~~lyd~Af~i~al~~-~~~tgd-------------- 130 (402)
T 3gt5_A 107 -----------------------------------------DDTNHCYGLAFVMLAYSC-GLKVGI-------------- 130 (402)
T ss_dssp -----------------------------------------ECCEEHHHHHHHHHHHHH-HHHTTC--------------
T ss_pred -----------------------------------------cCCcchHHHHHHHHHHHH-HHHhCC--------------
Confidence 001112346999999999 566887
Q ss_pred ChHHHHHHHHHHHHHHHHhccccCCCeEEEeecCC-CCCCCCCcccHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh
Q 005023 449 DRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNG-PSKAPGFLDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDEL 527 (718)
Q Consensus 449 ~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~~g-~~~~~~~l~DyA~li~all~LYeaTgd~~~L~~A~~L~~~~~~~ 527 (718)
++|++.|+++++.|.++++|+++|.++.++..+ ........++++.++++++.||++|+|++|+++|.++++.+.++
T Consensus 131 --~~~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~~~~~~~~~~n~~m~l~eall~L~~~tgd~~~~~~a~~l~~~~~~~ 208 (402)
T 3gt5_A 131 --KQAREWMDETWCLLERHFWDAEYGLYKDEADAQWNFTRYRGQNANMHMCEAMLAAYEASGEQRYLERALVLADRITRR 208 (402)
T ss_dssp --TTHHHHHHHHHHHHHHHTEETTTTEECCEECTTCCBCSCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTH
T ss_pred --hhHHHHHHHHHHHHHHHhcCCcCCCchhhhCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence 789999999999999999998767655344322 21112457788999999999999999999999999999999999
Q ss_pred cccccCCc---cccCCCCC-Ccc-ccccccC--CCCCCCChHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHH
Q 005023 528 FLDREGGG---YFNTTGED-PSV-LLRVKED--HDGAEPSGNSVSVINLVRLASIVAGSKSDYYRQNAEHSLAVFE 596 (718)
Q Consensus 528 F~D~~~Gg---~f~t~~~~-~~l-~~r~k~~--~D~a~PS~ns~~a~~LlrL~~lt~~~~~~~y~e~a~~~l~~~~ 596 (718)
|+|+++|. +|+..... ... ..+++.. -++..|+++..+++.|++++.++++ +.|.+.|.+++....
T Consensus 209 f~~~~~g~l~e~~~~dw~~~~~~~~~~~~~~~~~~~~~pGH~iE~awlLl~~~~~~~~---~~~~~~A~~l~~~~~ 281 (402)
T 3gt5_A 209 QAAKADGLVWEHYDMRWEVDWDYNRDNPKHLFRPWGFQPGHQTEWAKLLLILDRYIEV---EWLVPVARSLFDVAV 281 (402)
T ss_dssp HHHTTTTSCCSEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHCCC---TTHHHHHHHHHHHHH
T ss_pred hhCccCCeeEEEECCCCCCccccccCCcccccCcCCCCCChHHHHHHHHHHHHHhhCc---HHHHHHHHHHHHHHH
Confidence 99988776 44432210 000 1111111 1568899999999999999999985 679999999877653
No 6
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=99.91 E-value=4.7e-23 Score=227.12 Aligned_cols=308 Identities=13% Similarity=0.025 Sum_probs=214.4
Q ss_pred HHHHHHHHHHHhCCCcccCCCcEEE-EecCCCCCCCCCcchHHHHHHHHHHHHHHHHcc---CChHHHHHHHHHHHHHHH
Q 005023 211 KMVLFTLQCMAKGGIHDHVGGGFHR-YSVDERWHVPHFEKMLYDQGQLANVYLDAFSLT---KDVFYSYICRDILDYLRR 286 (718)
Q Consensus 211 ~~~~~TL~~m~~gGi~D~v~GGF~R-YsvD~~W~vPHFEKmLyDnA~ll~~ya~Ay~~t---~~~~y~~~A~~~~~~l~~ 286 (718)
+.....|..... +++|+++|||++ |++| ...+| ++|||++||++|++|+.||+++ +++.|+++|+++++||.+
T Consensus 17 ~~~~~~l~~w~~-~~~D~~~GGf~~~~~~d-g~~~~-~~k~l~~nar~l~~~a~a~~~~~~~~~~~~l~~A~~~~~fl~~ 93 (402)
T 1fp3_A 17 QELDRVMAFWLE-HSHDREHGGFFTCLGRD-GRVYD-DLKYVWLQGRQVWMYCRLYRKLERFHRPELLDAAKAGGEFLLR 93 (402)
T ss_dssp HHHHHHHHHHHH-HSBCTTTSSBCCCBCTT-SCBSC-CCEEHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhc-cCCCCCCCCEeeEECCC-CCCCC-CccchhhhHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHH
Confidence 334556666554 699999999965 4444 33566 7999999999999999999997 999999999999999999
Q ss_pred hccCCCC--ceeeeccCCcccccCcccccCCceEeechHHHHHHhchh--HHH-------HHHHhcccCCCCcCCCCCCC
Q 005023 287 DMIGPGG--EIFSAEDADSAETEGATRKKEGAFYVWTSKEVEDILGEH--AIL-------FKEHYYLKPTGNCDLSRMSD 355 (718)
Q Consensus 287 ~m~~p~G--gf~sa~DADs~~~~~~~~~~EG~yY~Wt~~Ei~~~L~~~--~~~-------~~~~~~v~~~Gn~~~~~~~d 355 (718)
.|++++| |||++.|+|+.+.+..+.-...+||+|...|+.++.++. .+. +.+.|...+.|.+.
T Consensus 94 ~~~d~~gg~g~~~s~d~dg~~~~~~~~lyd~af~~~a~~~~~~atgd~~~~~~A~~l~~~~~~~~~d~~~G~f~------ 167 (402)
T 1fp3_A 94 HARVAPPEKKCAFVLTRDGRPVKVQRSIFSECFYTMAMNELWRVTAEARYQSEAVDMMDQIVHWVREDPSGLGR------ 167 (402)
T ss_dssp HTBSSTTSCCBCSEECTTSCEEECCSSSHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTCGGGGCC------
T ss_pred hccCcCCCCceEEEECCCCCccccccchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhccCCCcccC------
Confidence 9999874 899999999876554455566899999999999998853 112 22222212334321
Q ss_pred CCCccCCcceeeccCCchHHHHhcCCCHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhchHHHH--HHHHHH---HHH
Q 005023 356 PHNEFKGKNVLIELNDSSASASKLGMPLEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLV--ISSFAR---ASK 430 (718)
Q Consensus 356 p~~~~eg~nvL~~~~~~~~~a~~~g~~~~~~~~~l~~~r~~L~~~R~~R~~P~~Ddkilt~WNgl~--I~ALa~---A~~ 430 (718)
.. .+ |...+.++|+.| +.++.. ++.
T Consensus 168 ------~~------------------------------------------~~--~~~~~~~~~~~m~~~~~~l~l~~l~~ 197 (402)
T 1fp3_A 168 ------PQ------------------------------------------LP--GAVASESMAVPMMLLCLVEQLGEEDE 197 (402)
T ss_dssp ------CC------------------------------------------CT--TSCCEEETHHHHHHHHHHHHHHTTCH
T ss_pred ------cc------------------------------------------cc--CccCCCCcchHHHHHHHHHHHHHHHH
Confidence 00 00 011223446644 445655 456
Q ss_pred HhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEee-cCCCCCC--CCCcccHHHHHH---HHHHH
Q 005023 431 ILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSF-RNGPSKA--PGFLDDYAFLIS---GLLDL 504 (718)
Q Consensus 431 ~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~-~~g~~~~--~~~l~DyA~li~---all~L 504 (718)
+.++ .|++.|.++++.+.++ +++.+|++...+ .++.+.. .+..-.+++.|+ .|+++
T Consensus 198 ~~~~-----------------~~~~~a~~~~~~~~~~-~~~~~~~~~e~~d~dw~~~~~~~g~~~~pgh~ie~~wlL~~a 259 (402)
T 1fp3_A 198 ELAG-----------------RYAQLGHWCARRILQH-VQRDGQAVLENVSEDGEELSGCLGRHQNPGHALEAGWFLLRH 259 (402)
T ss_dssp HHHH-----------------HTHHHHHHHHHHHHTT-EETTTTEECSEEETTSCBCCHHHHHEECHHHHHHHHHHHHHH
T ss_pred hcCc-----------------HHHHHHHHHHHHHHHH-hCcCCCeEEEEECCCCCccCCCCCCCCCCCcHHHHHHHHHHH
Confidence 6543 4899999999999988 887777765543 3332211 122245565454 79999
Q ss_pred HHHcCChHHHHHHHHHHHHH-HHhcccccCCccccCCCCCCccccccccCCCCCCCChHHHHHHHHHHHHHHhCCCCchH
Q 005023 505 YEFGSGTKWLVWAIELQNTQ-DELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAGSKSDY 583 (718)
Q Consensus 505 YeaTgd~~~L~~A~~L~~~~-~~~F~D~~~Gg~f~t~~~~~~l~~r~k~~~D~a~PS~ns~~a~~LlrL~~lt~~~~~~~ 583 (718)
+++++++.|++.|+++++.+ .++.||++.|+++.+...+...+. .-+. +...-.+++.++.+++.|+++|++ +.
T Consensus 260 ~~~~~~~~~l~~A~~~~~~~~~~~~~d~~~gg~~~~~~~~g~~~~-~l~d-~~~~~W~qaea~~a~l~ly~~tgd---~~ 334 (402)
T 1fp3_A 260 SSRSGDAKLRAHVIDTFLLLPFRSGWDADHGGLFYFQDADGLCPT-QLEW-AMKLWWPHSEAMIAFLMGYSESGD---PA 334 (402)
T ss_dssp HHHTTCHHHHHHHHHHHTHHHHHHHBCTTTCSBCSCEETTSCCCS-STTT-TCEEHHHHHHHHHHHHHHHHHHCC---HH
T ss_pred HHHcCChHHHHHHHHHHHHHHHHHhccCCCCCEEEeecCCCCccc-cCcC-CCcCcHHHHHHHHHHHHHHHHhCC---HH
Confidence 99999999999999999999 999999875666654222222111 0001 122235778899999999999996 88
Q ss_pred HHHHHHHHHHHHHHHHH
Q 005023 584 YRQNAEHSLAVFETRLK 600 (718)
Q Consensus 584 y~e~a~~~l~~~~~~i~ 600 (718)
|.+.|+++.+.+...+.
T Consensus 335 yl~~a~~~~~~~~~~f~ 351 (402)
T 1fp3_A 335 LLRLFYQVAEYTFRQFR 351 (402)
T ss_dssp HHHHHHHHHHHHHHHTB
T ss_pred HHHHHHHHHHHHHHhCc
Confidence 99999998888766553
No 7
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=99.89 E-value=2.3e-22 Score=222.21 Aligned_cols=337 Identities=12% Similarity=0.028 Sum_probs=235.9
Q ss_pred HHHHHHHHH-hcccccCCCCCC--------CCCCCChhHHH--HHHHhhhhhcccCCCCCCHHHHHHHHHHHHHHHhCCC
Q 005023 157 LRLCAEQLS-KSYDSRFGGFGS--------APKFPRPVEIQ--MMLYHSKKLEDTGKSGEASEGQKMVLFTLQCMAKGGI 225 (718)
Q Consensus 157 ~~~~~~~l~-~~~D~~~GGfg~--------apKFP~~~~l~--~Ll~~~~~~~~~~~~~~~~~~~~~~~~TL~~m~~gGi 225 (718)
++.++.+|. ...| ++|||.+ .|.++....++ ++.-+..... ..+++..+++|.++++.|.. .+
T Consensus 15 ~~~~l~fw~~~~~D-~~GGf~~~l~~dg~~~~~~~k~l~~n~r~i~~~a~a~~----~~g~~~~l~~A~~~~~fl~~-~~ 88 (402)
T 3gt5_A 15 ISDTMAFYHPRCID-SAGGFFHYFRDDGSIYNATHRHLVSSTRFVFNYAMAYL----QFGTAEYLDAVHHGLSYVRD-VH 88 (402)
T ss_dssp HHHHHHHHTTTTBC-TTSSBCCEECTTSCEEESSEEEHHHHHHHHHHHHHHHH----HHCCHHHHHHHHHHHHHHHH-TT
T ss_pred HHHHHHHHHhcCCC-CCcCeeeEECCCCCCCCCCchhHHHHHHHHHHHHHHHH----hhCChHHHHHHHHHHHHHHH-hC
Confidence 466788885 5789 6999974 24555544333 2222222211 12468999999999999987 68
Q ss_pred cccCCCcEEEEecCCCCCCCCCcchHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHhccCCC-CceeeeccCCcc
Q 005023 226 HDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMIGPG-GEIFSAEDADSA 304 (718)
Q Consensus 226 ~D~v~GGF~RYsvD~~W~vPHFEKmLyDnA~ll~~ya~Ay~~t~~~~y~~~A~~~~~~l~~~m~~p~-Ggf~sa~DADs~ 304 (718)
+|..+|||+ +++ +++.+...+|++||+|++|.++++ |..|+++.|++.|+++++++++.+++|+ |||+.+.+.|..
T Consensus 89 ~d~~~Gg~~-~~~-~dG~~~~~~~~lyd~Af~i~al~~-~~~tgd~~~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~~~ 165 (402)
T 3gt5_A 89 RNPATGGYA-WTL-CDDRVEDDTNHCYGLAFVMLAYSC-GLKVGIKQAREWMDETWCLLERHFWDAEYGLYKDEADAQWN 165 (402)
T ss_dssp BCTTTSCBC-SEE-ETTEEEECCEEHHHHHHHHHHHHH-HHHTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTTCC
T ss_pred ccCCCCcEE-EEe-eCCCCCcCCcchHHHHHHHHHHHH-HHHhCChhHHHHHHHHHHHHHHHhcCCcCCCchhhhCCCCC
Confidence 998779988 477 777766789999999999999999 6679999999999999999999999987 555545554421
Q ss_pred cccCcccccCCceEeechHHHHHHhchh---HHHHHHHhcccCCCCcCCCCCCCCCCccCCcceeeccCCchHHHHhcCC
Q 005023 305 ETEGATRKKEGAFYVWTSKEVEDILGEH---AILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGM 381 (718)
Q Consensus 305 ~~~~~~~~~EG~yY~Wt~~Ei~~~L~~~---~~~~~~~~~v~~~Gn~~~~~~~dp~~~~eg~nvL~~~~~~~~~a~~~g~ 381 (718)
. + .+= + .... ...+.+.|.++.+. .+
T Consensus 166 -~-------~-~~~--~-------~n~~m~l~eall~L~~~tgd~---------------------------~~------ 194 (402)
T 3gt5_A 166 -F-------T-RYR--G-------QNANMHMCEAMLAAYEASGEQ---------------------------RY------ 194 (402)
T ss_dssp -B-------C-SCE--E-------HHHHHHHHHHHHHHHHHHCCH---------------------------HH------
T ss_pred -C-------C-CCC--C-------CCHHHHHHHHHHHHHHhhCCH---------------------------HH------
Confidence 0 0 000 0 0000 11233333333211 11
Q ss_pred CHHHHHHHHHHHHHHHHhhhccCCCCCCCc--hhh------------------hchHHHHHHHHHHHHHHhhhhhhhhcc
Q 005023 382 PLEKYLNILGECRRKLFDVRSKRPRPHLDD--KVI------------------VSWNGLVISSFARASKILKSEAESAMF 441 (718)
Q Consensus 382 ~~~~~~~~l~~~r~~L~~~R~~R~~P~~Dd--kil------------------t~WNgl~I~ALa~A~~~~~d~~~~~~~ 441 (718)
.+..++.++.+.+++.+....+..-++|. +.+ -+-+.-..+.|.++++++++
T Consensus 195 -~~~a~~l~~~~~~~f~~~~~g~l~e~~~~dw~~~~~~~~~~~~~~~~~~~~~pGH~iE~awlLl~~~~~~~~------- 266 (402)
T 3gt5_A 195 -LERALVLADRITRRQAAKADGLVWEHYDMRWEVDWDYNRDNPKHLFRPWGFQPGHQTEWAKLLLILDRYIEV------- 266 (402)
T ss_dssp -HHHHHHHHHHHHTHHHHTTTTSCCSEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHCCC-------
T ss_pred -HHHHHHHHHHHHHHhhCccCCeeEEEECCCCCCccccccCCcccccCcCCCCCChHHHHHHHHHHHHHhhCc-------
Confidence 13345566666777776555554444432 111 12233356679999999887
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEe-ecCCCC-CCCCCcccHHHHHHHHHHHHHHcCChHHHHHHHH
Q 005023 442 NFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHS-FRNGPS-KAPGFLDDYAFLISGLLDLYEFGSGTKWLVWAIE 519 (718)
Q Consensus 442 ~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~-~~~g~~-~~~~~l~DyA~li~all~LYeaTgd~~~L~~A~~ 519 (718)
++|++.|++++++..++.||++.|+++.. ..+|.+ ...+.+++++..|.|++.||++|||++|+++|.+
T Consensus 267 ---------~~~~~~A~~l~~~~~~~gwd~~~Gg~~~~~d~~g~~~~~~k~~W~qaEal~a~l~ly~~tgd~~yl~~a~~ 337 (402)
T 3gt5_A 267 ---------EWLVPVARSLFDVAVARSWDAVRGGLCYGFAPDGTICDDDKYFWVQAESLAAAALLATRSGDERYWQWYDR 337 (402)
T ss_dssp ---------TTHHHHHHHHHHHHHHHHBCTTTCSBCSEECTTSCEEECCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred ---------HHHHHHHHHHHHHHHHhcccCCCCcEEEEEcCCCCeeeCCcceeHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 68999999999999999999877777655 455654 5568899999999999999999999999999999
Q ss_pred HHHHHHHhcccccCCccccCCCCCCccccccccCCCCCCCChHHHHHHHHHH
Q 005023 520 LQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVR 571 (718)
Q Consensus 520 L~~~~~~~F~D~~~Gg~f~t~~~~~~l~~r~k~~~D~a~PS~ns~~a~~Llr 571 (718)
+++.+.++|.|++.|+||+.-..+..+....|. .-+..|.++..|+..+++
T Consensus 338 ~~~~~~~~~~D~~~G~W~~~l~~dg~~~~~~k~-~~~K~~YH~~~a~~e~~~ 388 (402)
T 3gt5_A 338 LWAYAWQHMVDHRYGAWYRLLDGDNRKYNDEKS-PAGKTDYHTMGACHEVLN 388 (402)
T ss_dssp HHHHHHHHTBCTTTCSBCSEECTTSCBCCSCCB-CTTCSSHHHHHHHHHHHT
T ss_pred HHHHHHHhCcCCCCCeEEEEECCCCCCCCCCCC-CCCCCCccHHHHHHHHHH
Confidence 999999999999999999865555544433332 245678888887776654
No 8
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=99.88 E-value=2.8e-21 Score=211.60 Aligned_cols=338 Identities=12% Similarity=0.043 Sum_probs=220.9
Q ss_pred HHHHHHHHHH-HhcccccCCCC-CC---CCC-CCC--hhHHH--HHHHhhhhhcccCCCCCCHHHHHHHHHHHHHHHhCC
Q 005023 155 NALRLCAEQL-SKSYDSRFGGF-GS---APK-FPR--PVEIQ--MMLYHSKKLEDTGKSGEASEGQKMVLFTLQCMAKGG 224 (718)
Q Consensus 155 ~~~~~~~~~l-~~~~D~~~GGf-g~---apK-FP~--~~~l~--~Ll~~~~~~~~~~~~~~~~~~~~~~~~TL~~m~~gG 224 (718)
.+.+.++..| ...+|+ +||| .. ..+ .|. -...+ ++.-+...... ..+++..+++|.++++.|.+ -
T Consensus 15 ~l~~~~l~fw~~~~~D~-~GGf~~~~~~d~~~~~~eK~l~~nar~i~~~a~a~~~---~~~~~~~~~~A~~~~~~l~~-~ 89 (388)
T 2gz6_A 15 ALLNDVLPFWENHSLDS-EGGYFTCLDRQGKVYDTDKFIWLQNRQVWTFSMLCNQ---LEKRENWLKIARNGAKFLAQ-H 89 (388)
T ss_dssp HHHHTHHHHHHHHCBCT-TSSBCCEEBTTSCEEECCEEHHHHHHHHHHHHHHHHH---TCCCHHHHHHHHHHHHHHHH-H
T ss_pred HHHHhHHHHHHhcCCCC-CCCEEeEECCCCCcCCcchhHHHHHHHHHHHHHHHHH---hcCCHHHHHHHHHHHHHHHH-h
Confidence 3455677888 668999 9996 22 233 122 11111 22222221111 02468999999999999988 5
Q ss_pred CcccCCCcEEEEecCCCCCCCCCcchHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHhccCCCCceeeeccCCcc
Q 005023 225 IHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMIGPGGEIFSAEDADSA 304 (718)
Q Consensus 225 i~D~v~GGF~RYsvD~~W~vPHFEKmLyDnA~ll~~ya~Ay~~t~~~~y~~~A~~~~~~l~~~m~~p~Ggf~sa~DADs~ 304 (718)
++|. .|||+ +++|.+..+..-.|.+|+||++|.+++++|++|+++.|++.|+++++++++.+.+++ |++.....+..
T Consensus 90 ~~~~-~Gg~~-~~~d~dg~~~~~~~~~~~~af~i~al~~~y~~tg~~~~l~~A~~~~~~i~~~~~d~~-g~~~~~~~~~~ 166 (388)
T 2gz6_A 90 GRDD-EGNWY-FALTRGGEPLVQPYNIFSDCFAAMAFSQYALASGEEWAKDVAMQAYNNVLRRKDNPK-GKYTKTYPGTR 166 (388)
T ss_dssp SBCT-TSCBC-SEECTTSCBCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTC---------------CC
T ss_pred cCCC-CCCEE-EEEcCCCCcccCCcchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCC-cccCcccCCCC
Confidence 5676 58999 588888877666899999999999999999999999999999999999999998765 55543221210
Q ss_pred cccCcccccCCceEeechHHHHHHhchhH---HHHHHHhcccCCCCcCCCCCCCCCCccCCcceeeccCCchHHHHhcCC
Q 005023 305 ETEGATRKKEGAFYVWTSKEVEDILGEHA---ILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGM 381 (718)
Q Consensus 305 ~~~~~~~~~EG~yY~Wt~~Ei~~~L~~~~---~~~~~~~~v~~~Gn~~~~~~~dp~~~~eg~nvL~~~~~~~~~a~~~g~ 381 (718)
+ ..| +.... ..+.+.|.++.+ +.+.
T Consensus 167 ~-------~~~-------------~~~~~~~~~all~l~~~t~d---------------------------~~~~----- 194 (388)
T 2gz6_A 167 P-------MKA-------------LAVPMILANLTLEMEWLLPQ---------------------------ETLE----- 194 (388)
T ss_dssp C-------CEE-------------THHHHHHHHHHHHTGGGSCH---------------------------HHHH-----
T ss_pred C-------CCC-------------CCHHHHHHHHHHHHHHHcCC---------------------------HHHH-----
Confidence 0 000 00111 111222222210 0010
Q ss_pred CHHHHHHHHHHHHHHHHhhhccCCCCCCC-----------chhhhchHHHHHHHHHHHHHHhhhhhhhhcccCCCCCCCh
Q 005023 382 PLEKYLNILGECRRKLFDVRSKRPRPHLD-----------DKVIVSWNGLVISSFARASKILKSEAESAMFNFPVVGSDR 450 (718)
Q Consensus 382 ~~~~~~~~l~~~r~~L~~~R~~R~~P~~D-----------dkilt~WNgl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~ 450 (718)
+...+.++.+.+++.+....+..+++| +.+.-+-|..+++.|.++++++++
T Consensus 195 --~~A~~~~~~~~~~~~~~~~g~~~e~~~~~w~~~~~~~~~~~~pgh~~e~a~lL~~~~~~tgd---------------- 256 (388)
T 2gz6_A 195 --NVLAATVQEVMGDFLDQEQGLMYENVAPDGSHIDCFEGRLINPGHGIEAMWFIMDIARRKND---------------- 256 (388)
T ss_dssp --HHHHHHHHHHHHTTEETTTTEECSEECTTSCCCCSTTTTEECHHHHHHHHHHHHHHHHHTTC----------------
T ss_pred --HHHHHHHHHHHHHHhccCCCeEEEEECCCCCCCCCcccCcCCCCHHHHHHHHHHHHHHHcCC----------------
Confidence 122334444444444444344433322 223334456678899999999998
Q ss_pred HHHHHHHHHHHHHHHHhccccCCCeEEEe-ecCCCCC-----CCCCcccHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 005023 451 KEYMEVAESAASFIRRHLYDEQTHRLQHS-FRNGPSK-----APGFLDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQ 524 (718)
Q Consensus 451 ~~~l~~A~~~~~~l~~~~~d~~~g~l~~~-~~~g~~~-----~~~~l~DyA~li~all~LYeaTgd~~~L~~A~~L~~~~ 524 (718)
++|++.|+++++++.++.|+++.|++++. ..+|.+. ..+.++.+|..+.|++.+|++|||++|+++|.++++.+
T Consensus 257 ~~~~~~A~~~~~~~~~~g~d~~~Gg~~~~~~~~g~~~~~~~~~~~~~W~qae~i~a~~~ly~~tgd~~yl~~a~~~~~~~ 336 (388)
T 2gz6_A 257 SKTINQAVDVVLNILNFAWDNEYGGLYYFMDAAGHPPQQLEWDQKLWWVHLESLVALAMGYRLTGRDACWAWYQKMHDYS 336 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHBCTTTCSBCSCEETTSCCCSCTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCCEEEeecCCCCccccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 79999999999999999999876777765 4556653 34566779999999999999999999999999999999
Q ss_pred HHhcccccCCccccCCCCCCccccccccCCCCCCCChHHHHHHHHHH
Q 005023 525 DELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVR 571 (718)
Q Consensus 525 ~~~F~D~~~Gg~f~t~~~~~~l~~r~k~~~D~a~PS~ns~~a~~Llr 571 (718)
.++|.|+++|+||+.-..+..+....| ..-+..|.++..++..+++
T Consensus 337 ~~~~~D~~~G~w~~~l~~~g~~~~~~~-~~~~K~~YH~~~~~~~~~~ 382 (388)
T 2gz6_A 337 WQHFADPEYGEWFGYLNRRGEVLLNLK-GGKWKGCFHVPRAMYLCWQ 382 (388)
T ss_dssp HHHHBCTTTSSBCCEECTTSCBSSCBS-CCSSCSSSHHHHHHHHHHH
T ss_pred HHhCcCCCCCceEEeeCCCcCCCCcCC-CCCCCCCcchHHHHHHHHH
Confidence 999999999999987655554443222 2234579999887765443
No 9
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=99.88 E-value=1.2e-21 Score=214.91 Aligned_cols=256 Identities=13% Similarity=0.059 Sum_probs=195.8
Q ss_pred HHHHHHhhhhhcccCCCCCCHHHHHHHHHHHHHHHhCCCcccCCCcEEEEecCCCCCCCCCcchHHHHHHHHHH-HHHHH
Q 005023 187 IQMMLYHSKKLEDTGKSGEASEGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANV-YLDAF 265 (718)
Q Consensus 187 l~~Ll~~~~~~~~~~~~~~~~~~~~~~~~TL~~m~~gGi~D~v~GGF~RYsvD~~W~vPHFEKmLyDnA~ll~~-ya~Ay 265 (718)
.-.|+..+..++ ++..++.+..-.+.+..+ +-.++ ..+--|-+++... |..+|
T Consensus 74 ~G~lw~~ye~Tg-------d~~~~~~a~~~~~~l~~~-~~~~~------------------~~~~HD~GF~~~~s~~~~y 127 (397)
T 2zzr_A 74 TGCLWLAYEYNQ-------DKKLKNIAHKNVLSFLNR-INNRI------------------ALDHHDLGFLYTPSCTAEY 127 (397)
T ss_dssp HHHHHHHHHHHC-------CHHHHHHHHHHHHHHHHH-HHTTC------------------SCCSSTHHHHHTTTHHHHH
T ss_pred HHHHHHHHHHHC-------CHHHHHHHHHHHHHHHHh-hhhcc------------------cCCCCCchHHHHHHHHHHH
Confidence 345666665553 578888887777777652 22221 1111135555555 89999
Q ss_pred HccCChHHHHHHHHHHHHHHHhccCCCCceeeeccCCcccccCcccccCCceEeechHHHHHHhchhHHHHHHHhcccCC
Q 005023 266 SLTKDVFYSYICRDILDYLRRDMIGPGGEIFSAEDADSAETEGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPT 345 (718)
Q Consensus 266 ~~t~~~~y~~~A~~~~~~l~~~m~~p~Ggf~sa~DADs~~~~~~~~~~EG~yY~Wt~~Ei~~~L~~~~~~~~~~~~v~~~ 345 (718)
++|+|+.|++++.+++++|...+ +|.+||..+-+....
T Consensus 128 ~ltg~~~~~~~~~~aA~~L~~r~-~~~~g~iqsw~~~~~----------------------------------------- 165 (397)
T 2zzr_A 128 RINGDVKALEATIKAADKLMERY-QEKGGFIQAWGELGY----------------------------------------- 165 (397)
T ss_dssp HHHCCHHHHHHHHHHHHHHHTTE-ETTTTEECCSSSTTC-----------------------------------------
T ss_pred HHhCCHHHHHHHHHHHHHHHHHh-CcCCCEEEecccCCC-----------------------------------------
Confidence 99999999999999999999988 778888776432110
Q ss_pred CCcCCCCCCCCCCccCCcceeeccCCchHHHHhcCCCHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhchHHHHHHHH
Q 005023 346 GNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLVISSF 425 (718)
Q Consensus 346 Gn~~~~~~~dp~~~~eg~nvL~~~~~~~~~a~~~g~~~~~~~~~l~~~r~~L~~~R~~R~~P~~Ddkilt~WNgl~I~AL 425 (718)
+ .++ +.++ .|.|.|.+|
T Consensus 166 ----------~---~~~--------------------------------------------~~iI------D~~mni~~L 182 (397)
T 2zzr_A 166 ----------K---EHY--------------------------------------------RLII------DCLLNIQLL 182 (397)
T ss_dssp ----------G---GGC--------------------------------------------EEET------THHHHTHHH
T ss_pred ----------C---CCC--------------------------------------------ceee------chHhHHHHH
Confidence 0 000 1112 347789999
Q ss_pred HHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEeec----CCCCC----CCCCcccH---
Q 005023 426 ARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFR----NGPSK----APGFLDDY--- 494 (718)
Q Consensus 426 a~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~----~g~~~----~~~~l~Dy--- 494 (718)
++|++++|+ ++|++.|++.++++.++++++ +|+++|+++ +|.+. ..|+++||
T Consensus 183 ~~A~~~~gd----------------~~y~~~A~~ha~~~l~~~~r~-dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~Wa 245 (397)
T 2zzr_A 183 FFAYEQTGD----------------EKYRQVAVNHFYASANNVVRD-DSSAFHTFYFDPETGEPLKGVTRQGYSDESSWA 245 (397)
T ss_dssp HHHHHHHCC----------------HHHHHHHHHHHHHHHHHTBCT-TSCBCSEEEECTTTCCEEEEECTTSSSTTSCBH
T ss_pred HHHHHHhCC----------------HHHHHHHHHHHHHHHHhCcCC-CCCeEEEEEeeCCCCCcccCCcccccCcchhhH
Confidence 999999998 899999999999999999875 589999976 78763 78999997
Q ss_pred ---HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcccccCCccccCCCCCCccccccccCCCCCCCChHHHHHHHHHH
Q 005023 495 ---AFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVR 571 (718)
Q Consensus 495 ---A~li~all~LYeaTgd~~~L~~A~~L~~~~~~~F~D~~~Gg~f~t~~~~~~l~~r~k~~~D~a~PS~ns~~a~~Llr 571 (718)
||+|.|++++|++|+|++||+.|+++++.++++|- .+++.||++..++ ++.++++ ||+||++|.+|++
T Consensus 246 RGqAw~i~gl~~lY~~T~d~~yL~~A~~la~~~l~~~~-~d~~pywdt~~~~--~~~~~~D------~Sa~aiaA~~Ll~ 316 (397)
T 2zzr_A 246 RGQAWGIYGIPLSYRKMKDYQQIILFKGMTNYFLNRLP-EDKVSYWDLIFTD--GSGQPRD------TSATATAVCGIHE 316 (397)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTCC-TTSCCBSBTTCCT--TSCCCBC------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhH-HhCCccccCCCCC--CCCCcCC------CCHHHHHHHHHHH
Confidence 99999999999999999999999999999999993 2334488886543 3455554 9999999999999
Q ss_pred HHHHhCCCCchH--HHHHHHHHHHHHHHHH
Q 005023 572 LASIVAGSKSDY--YRQNAEHSLAVFETRL 599 (718)
Q Consensus 572 L~~lt~~~~~~~--y~e~a~~~l~~~~~~i 599 (718)
|+++|++..... |++.|+++|+.+.+..
T Consensus 317 L~~~~~~~~~~~~~Y~~~A~~~l~~l~~~y 346 (397)
T 2zzr_A 317 MLKYLPEVDPDKETYKYAMHTMLRSLIEQY 346 (397)
T ss_dssp HHTTSCTTCTTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhcCccchhhHHHHHHHHHHHHHHHHHH
Confidence 999997522356 9999999999987653
No 10
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=99.87 E-value=3.3e-21 Score=214.17 Aligned_cols=249 Identities=10% Similarity=0.033 Sum_probs=188.4
Q ss_pred CcccCCCcEEEEecCCCCC-CCCCcchHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHhccCCC-CceeeeccCC
Q 005023 225 IHDHVGGGFHRYSVDERWH-VPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMIGPG-GEIFSAEDAD 302 (718)
Q Consensus 225 i~D~v~GGF~RYsvD~~W~-vPHFEKmLyDnA~ll~~ya~Ay~~t~~~~y~~~A~~~~~~l~~~m~~p~-Ggf~sa~DAD 302 (718)
..|+. ||+ ++|.+|. +|++|||+++||++|++|+.||+ ++++.|+++|+++++||.+.|++++ ||||.+.|+|
T Consensus 27 ~~d~~--GF~--~ld~~g~~~~~~~k~~~~nar~i~~~a~a~~-~g~~~~l~~A~~~~~fl~~~~~D~~~GG~~~s~d~d 101 (421)
T 2zbl_A 27 AVVPT--GFG--WLGNKGQIKEEMGTHLWITARMLHVYSVAAS-MGRPGAYDLVDHGIKAMNGALRDKKYGGWYACVNDQ 101 (421)
T ss_dssp GEETT--EEC--CBCTTSCBCGGGCEEHHHHHHHHHHHHHHHH-TTCTTHHHHHHHHHHHHTTTTBCTTTSSBCSEEETT
T ss_pred CcCCC--Ccc--eECCCCCCCCCchhhHHHHHHHHHHHHHHHH-cCChhHHHHHHHHHHHHHHhccCcCCCeEEEEeCCC
Confidence 67988 785 9999996 79999999999999999999998 9999999999999999999999987 8999998877
Q ss_pred cccccCcccccCCceEeechHHHHHHhchhHHHHHHHhcccCCCCcCCCCCCCCCCccCCcceeeccCCchHHHHhcCCC
Q 005023 303 SAETEGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMP 382 (718)
Q Consensus 303 s~~~~~~~~~~EG~yY~Wt~~Ei~~~L~~~~~~~~~~~~v~~~Gn~~~~~~~dp~~~~eg~nvL~~~~~~~~~a~~~g~~ 382 (718)
..+.
T Consensus 102 g~~~---------------------------------------------------------------------------- 105 (421)
T 2zbl_A 102 GVVD---------------------------------------------------------------------------- 105 (421)
T ss_dssp EEEE----------------------------------------------------------------------------
T ss_pred CCcC----------------------------------------------------------------------------
Confidence 5210
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhchHHHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHH
Q 005023 383 LEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAAS 462 (718)
Q Consensus 383 ~~~~~~~l~~~r~~L~~~R~~R~~P~~Ddkilt~WNgl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~ 462 (718)
++|. ..-|+++|.|++. ++++++ ++|++.|+++.+
T Consensus 106 ---------------------------~~k~-lyd~Af~i~al~~-~~~tg~----------------~~~l~~a~~~~~ 140 (421)
T 2zbl_A 106 ---------------------------ASKQ-GYQHFFALLGAAS-AVTTGH----------------PEARKLLDYTIE 140 (421)
T ss_dssp ---------------------------CCEE-HHHHHHHHHHHHH-HHTTTC----------------TTHHHHHHHHHH
T ss_pred ---------------------------Cchh-HHHHHHHHHHHHH-HHHhCC----------------ccHHHHHHHHHH
Confidence 0111 1125999999999 899988 789999999999
Q ss_pred HHHHhccccCCCeEEEee-cCCCC-CCCCCcccHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcccccCCccccCC
Q 005023 463 FIRRHLYDEQTHRLQHSF-RNGPS-KAPGFLDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDREGGGYFNTT 540 (718)
Q Consensus 463 ~l~~~~~d~~~g~l~~~~-~~g~~-~~~~~l~DyA~li~all~LYeaTgd~~~L~~A~~L~~~~~~~F~D~~~Gg~f~t~ 540 (718)
++.+++++++.|+++.+. .++++ .....++.+++++.+++.+|++|++++|+++|.++++.+..++.+..+|......
T Consensus 141 ~l~~~~~d~~~Ggf~~~~d~d~~~~~~~~~~n~~m~~~~al~~l~~~tgd~~~~~~A~~~~~~~~~~~~~~~~~~l~~~f 220 (421)
T 2zbl_A 141 VIEKYFWSEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASVIIHDVARNGDYRVNEHF 220 (421)
T ss_dssp HHHHHTEETTTTEECCEECTTSCSBCSCEEHHHHHHHHHHHHHHHHTTCCTHHHHHHHHHHHHHCCCCCGGGTTCCCCEE
T ss_pred HHHHHhccCCCCCeeeeecCCCCcccccCCCcHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhccCCCCchhhhc
Confidence 999999998677777664 33322 1224456777889999999999999999999999999999999886655432211
Q ss_pred CCCCcccccc-cc-CCCC-----CCCChHHHHHHHHHHHHHHhCCCCc--h-HHHHHHHHHHHHHHHHH
Q 005023 541 GEDPSVLLRV-KE-DHDG-----AEPSGNSVSVINLVRLASIVAGSKS--D-YYRQNAEHSLAVFETRL 599 (718)
Q Consensus 541 ~~~~~l~~r~-k~-~~D~-----a~PS~ns~~a~~LlrL~~lt~~~~~--~-~y~e~a~~~l~~~~~~i 599 (718)
.++...+... .+ ..+- ..|.+.-.+++.|++++.+++...+ + .|.+.|.++........
T Consensus 221 ~~~~~~~~~~~~dd~~~r~~~~~~~pgh~iE~~wlLl~~~~~~~~~~~~~~~~~l~~A~~l~~~~~~~g 289 (421)
T 2zbl_A 221 DSQWNPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHATIRDA 289 (421)
T ss_dssp CTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHH
T ss_pred CCccccchhccCCCcccccccCCCCCChHHHHHHHHHHHHHHcccccccchHHHHHHHHHHHHHHHHHh
Confidence 1121111100 11 0111 2477777788999999999942101 3 79999988887764433
No 11
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=99.84 E-value=4.9e-20 Score=201.23 Aligned_cols=256 Identities=18% Similarity=0.158 Sum_probs=193.9
Q ss_pred HHHHHHhhhhhcccCCCCCCHHHHHHHHHHHHHHHhCCCcccCCCcEEEEecCCCCCCCCCcchHHHHHHHHH-HHHHHH
Q 005023 187 IQMMLYHSKKLEDTGKSGEASEGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLAN-VYLDAF 265 (718)
Q Consensus 187 l~~Ll~~~~~~~~~~~~~~~~~~~~~~~~TL~~m~~gGi~D~v~GGF~RYsvD~~W~vPHFEKmLyDnA~ll~-~ya~Ay 265 (718)
.-.|+..+..++ ++..++.+..-.+.+..+ +-.++.-.- .|-+.+.. .|..+|
T Consensus 48 ~g~lw~~ye~Tg-------d~~~~~~a~~~~~~l~~~-~~~~~~~~~------------------HD~Gf~~~~s~~~~y 101 (377)
T 2ahf_A 48 SGILWLCYEYTG-------DEQYREGAVRTVASFRER-LDRFENLDH------------------HNIGFLYSLSAKAQW 101 (377)
T ss_dssp HHHHHHHHHHHC-------CHHHHHHHHHHHHHHHHH-HTTTTTCCB------------------STHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHhC-------CHHHHHHHHHHHHHHHHh-hhcccCCCC------------------CCchHhhHHHHHHHH
Confidence 345666665553 578888888777777652 222322111 13566664 789999
Q ss_pred HccCChHHHHHHHHHHHHHHHhccCCCCceeeeccCCcccccCcccccCCceEeechHHHHHHhchhHHHHHHHhcccCC
Q 005023 266 SLTKDVFYSYICRDILDYLRRDMIGPGGEIFSAEDADSAETEGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPT 345 (718)
Q Consensus 266 ~~t~~~~y~~~A~~~~~~l~~~m~~p~Ggf~sa~DADs~~~~~~~~~~EG~yY~Wt~~Ei~~~L~~~~~~~~~~~~v~~~ 345 (718)
++|+|+.|++++.++.++|...+. |.+||..+-+.-. ..
T Consensus 102 ~ltg~~~~~~~~~~aA~~L~~r~~-~~~g~i~sw~~~~----------------------------------------~~ 140 (377)
T 2ahf_A 102 IVEKDESARKLALDAADVLMRRWR-ADAGIIQAWGPKG----------------------------------------DP 140 (377)
T ss_dssp HHHCCHHHHHHHHHHHHHHHTTEE-TTTTEECCBSSTT----------------------------------------CT
T ss_pred HHhCCHHHHHHHHHHHHHHHHhCC-CCCCeEEeccCCC----------------------------------------CC
Confidence 999999999999999999999875 6766655422100 00
Q ss_pred CCcCCCCCCCCCCccCCcceeeccCCchHHHHhcCCCHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhchHHHHHHHH
Q 005023 346 GNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLVISSF 425 (718)
Q Consensus 346 Gn~~~~~~~dp~~~~eg~nvL~~~~~~~~~a~~~g~~~~~~~~~l~~~r~~L~~~R~~R~~P~~Ddkilt~WNgl~I~AL 425 (718)
+| .|. .++|. -|||.+|
T Consensus 141 ~~-------------~~~--------------------------------------------~iID~------mmni~~L 157 (377)
T 2ahf_A 141 EN-------------GGR--------------------------------------------IIIDC------LLNLPLL 157 (377)
T ss_dssp TT-------------TTE--------------------------------------------EEGGG------GGGHHHH
T ss_pred CC-------------Cce--------------------------------------------EEech------HHHHHHH
Confidence 00 011 12222 5789999
Q ss_pred HHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEeec----CCCC----CCCCCcccH---
Q 005023 426 ARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFR----NGPS----KAPGFLDDY--- 494 (718)
Q Consensus 426 a~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~----~g~~----~~~~~l~Dy--- 494 (718)
++|++++|+ ++|++.|++.++++.++++++ +|+++|+++ +|.+ ...|+++||
T Consensus 158 ~~A~~~~gd----------------~~y~~~A~~~a~~~l~~~~r~-dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~Wa 220 (377)
T 2ahf_A 158 LWAGEQTGD----------------PEYRRVAEAHALKSRRFLVRG-DDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWT 220 (377)
T ss_dssp HHHHHHHCC----------------THHHHHHHHHHHHHHHHTBBT-TSCBCSEEEECTTTCCEEEEECSSSSSTTSCBH
T ss_pred HHHHHHhCC----------------HHHHHHHHHHHHHHHHhCcCC-CCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhH
Confidence 999999998 899999999999999999885 579999987 8877 778999996
Q ss_pred ---HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcccccCC-ccccCCCCCCccccccccCCCCCCCChHHHHHHHHH
Q 005023 495 ---AFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDREGG-GYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLV 570 (718)
Q Consensus 495 ---A~li~all~LYeaTgd~~~L~~A~~L~~~~~~~F~D~~~G-g~f~t~~~~~~l~~r~k~~~D~a~PS~ns~~a~~Ll 570 (718)
|++|.|++++|++|++++||+.|+++++.++++| ++.| .||++.. +.++.+++ .||+||+++.+|+
T Consensus 221 RGqAw~i~gl~~ly~~T~d~~yL~~A~~la~~~l~~~--~~d~~pywd~~~--~~~~~~~~------d~Sa~aiaA~~Ll 290 (377)
T 2ahf_A 221 RGQAWGIYGFALNSRYLGNADLLETAKRMARHFLARV--PEDGVVYWDFEV--PQEPSSYR------DSSASAITACGLL 290 (377)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTC--CTTSSCBSBTTS--CCCTTSCB------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCChHHHHHHHHHHHHHHHhh--HHhCCcccccCC--CccCCCcc------CCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999 3444 4888754 33445554 3999999999999
Q ss_pred HHHHHhCCC--CchHHHHHHHHHHHHHHHHH
Q 005023 571 RLASIVAGS--KSDYYRQNAEHSLAVFETRL 599 (718)
Q Consensus 571 rL~~lt~~~--~~~~y~e~a~~~l~~~~~~i 599 (718)
+|+++++.. .++.|++.|+++++.+.+..
T Consensus 291 ~L~~~~~~~~~~~~~Y~~~A~~~l~~l~~~y 321 (377)
T 2ahf_A 291 EIASQLDESDPERQRFIDAAKTTVTALRDGY 321 (377)
T ss_dssp HHHHTSCTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhcCccccchHHHHHHHHHHHHHHHHHH
Confidence 999999621 13679999999999986643
No 12
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.77 E-value=4.9e-19 Score=170.11 Aligned_cols=99 Identities=14% Similarity=0.275 Sum_probs=80.4
Q ss_pred hhHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcE
Q 005023 3 RRSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLS 79 (718)
Q Consensus 3 ~~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~ 79 (718)
++|+++||+++|+||+ ++||+|||+|++++|+||+|+++||+|||.|+||+++ |+ ...+++ .++..|+|+.
T Consensus 32 ~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~-~~-~~~l~~----~y~v~~~P~~ 105 (153)
T 2dlx_A 32 ETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDS-EE-GQRYIQ----FYKLGDFPYV 105 (153)
T ss_dssp HHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSS-HH-HHHHHH----HHTCCSSSEE
T ss_pred HHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCC-Hh-HHHHHH----HcCCCCCCEE
Confidence 5899999999999976 4899999999999999999999999999999999965 33 233333 3688999999
Q ss_pred EEeCCC-CceeecccccCCCCCCCcccHHHHHHHH
Q 005023 80 VFLSPD-LKPLMGGTYFPPEDKYGRPGFKTILRKV 113 (718)
Q Consensus 80 vfl~p~-g~p~~~~~y~p~~~~~~~~~f~~~L~~i 113 (718)
+|++|+ |+++...++++++ .|++.|+++
T Consensus 106 ~fld~~~G~~l~~~~g~~~~------~fl~~L~~~ 134 (153)
T 2dlx_A 106 SILDPRTGQKLVEWHQLDVS------SFLDQVTGF 134 (153)
T ss_dssp EEECTTTCCCCEEESSCCHH------HHHHHHHHH
T ss_pred EEEeCCCCcEeeecCCCCHH------HHHHHHHHH
Confidence 999999 8887643444443 677777654
No 13
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=99.74 E-value=2.4e-16 Score=170.81 Aligned_cols=241 Identities=15% Similarity=0.096 Sum_probs=180.0
Q ss_pred HHHHHHHhhhhhcccCCCCCCHHHHHHHHHHHHHHHhCCCcccCCCcEEEEecCCCCCCCCCcchHHHHHHHHHHHHHHH
Q 005023 186 EIQMMLYHSKKLEDTGKSGEASEGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAF 265 (718)
Q Consensus 186 ~l~~Ll~~~~~~~~~~~~~~~~~~~~~~~~TL~~m~~gGi~D~v~GGF~RYsvD~~W~vPHFEKmLyDnA~ll~~ya~Ay 265 (718)
.+..|+.++..++ ++..++++.++++.+.. ..+|.+ ++ ..+-|+|.++.++.++|
T Consensus 51 ~~~~l~d~~~~tg-------d~~y~~~a~~~~~~~~~-----~~~~~~----------~~---~~~DD~a~~~la~~~ay 105 (349)
T 3k7x_A 51 LVEVRLDAYLRTK-------KQADLEVAEKTYLHNKN-----RNGGTL----------IH---DFYDDMLWNALAAYRLY 105 (349)
T ss_dssp HHHHHHHHHHHHC-------CHHHHHHHHHHHHHHHH-----HTTSSS----------CC---SBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-------CHHHHHHHHHHHHHHHh-----cCCCCC----------Cc---cCccHHHHHHHHHHHHH
Confidence 3456677776653 58899999999987764 112211 11 22568999999999999
Q ss_pred HccCChHHHHHHHHHHHHH-HHhccCC--CCceeeeccCCcccccCcccccCCceEeechHHHHHHhchhHHHHHHHhcc
Q 005023 266 SLTKDVFYSYICRDILDYL-RRDMIGP--GGEIFSAEDADSAETEGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYL 342 (718)
Q Consensus 266 ~~t~~~~y~~~A~~~~~~l-~~~m~~p--~Ggf~sa~DADs~~~~~~~~~~EG~yY~Wt~~Ei~~~L~~~~~~~~~~~~v 342 (718)
++|+++.|++.|+++.+++ .+. +++ +|||++..+.+
T Consensus 106 e~t~~~~yL~~A~~l~~~l~~~~-wd~~~gGGi~W~~~~~---------------------------------------- 144 (349)
T 3k7x_A 106 KATGKSIYLEDAQLVWQDLVDTG-WNDIMGGGFAWRRPQM---------------------------------------- 144 (349)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHT-BCSGGGSCBEEETTEE----------------------------------------
T ss_pred HHHCCchHHHHHHHHHHHHHHhC-CCCCCCCceEecCCCc----------------------------------------
Confidence 9999999999999999999 554 444 37777653210
Q ss_pred cCCCCcCCCCCCCCCCccCCcceeeccCCchHHHHhcCCCHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhchHHHHH
Q 005023 343 KPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLVI 422 (718)
Q Consensus 343 ~~~Gn~~~~~~~dp~~~~eg~nvL~~~~~~~~~a~~~g~~~~~~~~~l~~~r~~L~~~R~~R~~P~~Ddkilt~WNgl~I 422 (718)
..+| ++ -|++++
T Consensus 145 ------------------~~kn------------------------------------------------ai--sN~~~~ 156 (349)
T 3k7x_A 145 ------------------YYKN------------------------------------------------TP--VNAPFI 156 (349)
T ss_dssp ------------------EEEE------------------------------------------------HH--HHHHHH
T ss_pred ------------------cccc------------------------------------------------hh--hHHHHH
Confidence 0011 11 389999
Q ss_pred HHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEeec---CCCCC-CCCCcccHHHHH
Q 005023 423 SSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFR---NGPSK-APGFLDDYAFLI 498 (718)
Q Consensus 423 ~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~---~g~~~-~~~~l~DyA~li 498 (718)
.++++++++++| ++|++.|+++++|+.+++++++ |.++.... +|... ...+..+++++|
T Consensus 157 ~~la~l~~~tgd----------------~~Yl~~A~~~~~w~~~~l~d~~-g~v~Dg~~~~~~g~~~~~~~~tYnqg~~l 219 (349)
T 3k7x_A 157 ILSCWLYNELNE----------------TKYLEWAMKTYEWQTKVLVRED-GFVEDGINRLEDGTIDYEWKFTYNQGVYI 219 (349)
T ss_dssp HHHHHHHHHHCC----------------HHHHHHHHHHHHHHHHHHBCTT-SCBCCEECTTSSSCBCTTCCCHHHHHHHH
T ss_pred HHHHHHHHHhCC----------------HHHHHHHHHHHHHHHhcCCCCC-CeEecCCccCCCCccCCcCeeeHHHHHHH
Confidence 999999999998 8999999999999999999976 66654422 23222 247888999999
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHHhcccccCCccccCCCCCCccccccccCCCCCCCChHHHHHHHHHHHHHHhCC
Q 005023 499 SGLLDLYEFGSGTKWLVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAG 578 (718)
Q Consensus 499 ~all~LYeaTgd~~~L~~A~~L~~~~~~~F~D~~~Gg~f~t~~~~~~l~~r~k~~~D~a~PS~ns~~a~~LlrL~~lt~~ 578 (718)
.|++.||++|+|++||+.|++|++.++++|+. +|-+++. ..++..+|.++++++.|..|+.++..
T Consensus 220 ~g~~~LY~~T~d~~yl~~a~~l~~~~~~~f~~--~gi~~~~-------------~~~~D~~sFkgi~~r~L~~l~~~~p~ 284 (349)
T 3k7x_A 220 GANLELYRITKEAIYLDTANKTAAISLKELTE--DGIFKDE-------------GNGGDEGLFKGIFYRYFTDLIEETAN 284 (349)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEE--TTEECCC-------------CSSSGGGGHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhhCcHHHHHHHHHHHHHHHHHhcc--CCcccCC-------------CCCccHHHHHHHHHHHHHHHHHHCCh
Confidence 99999999999999999999999999999973 4433321 12466799999999999999999974
Q ss_pred CCchHHHHHHHHHHHHH
Q 005023 579 SKSDYYRQNAEHSLAVF 595 (718)
Q Consensus 579 ~~~~~y~e~a~~~l~~~ 595 (718)
+.|+...+...++.
T Consensus 285 ---~~~~~~l~~sa~aa 298 (349)
T 3k7x_A 285 ---KTYRDFVLNSCQIL 298 (349)
T ss_dssp ---HHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHH
Confidence 55555554444443
No 14
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.58 E-value=2.2e-15 Score=144.29 Aligned_cols=108 Identities=13% Similarity=0.275 Sum_probs=87.0
Q ss_pred hhHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcE
Q 005023 3 RRSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLS 79 (718)
Q Consensus 3 ~~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~ 79 (718)
++|+++|++++||||+ .+||+||+.|+..+++++++.+++|.+||.|+||.+ .+++... .++.|+|++
T Consensus 34 ~~al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e-~~~~~~~--------~~v~~~PT~ 104 (151)
T 3ph9_A 34 EEGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHE-TTDKNLS--------PDGQYVPRI 104 (151)
T ss_dssp HHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSC-CSCGGGC--------TTCCCSSEE
T ss_pred HHHHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCC-chhhHhh--------cCCCCCCEE
Confidence 5899999999999976 499999999999999999999999989999999954 4454322 567899999
Q ss_pred EEeCCCCceeec-ccccC-CCCCCCcccHHHHHHHHHHHHhh
Q 005023 80 VFLSPDLKPLMG-GTYFP-PEDKYGRPGFKTILRKVKDAWDK 119 (718)
Q Consensus 80 vfl~p~g~p~~~-~~y~p-~~~~~~~~~f~~~L~~i~~~w~~ 119 (718)
+|++|+|+++.. .|+.+ +.-.+...+|.++|+.+.++++.
T Consensus 105 ~f~~~~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~~~~al~~ 146 (151)
T 3ph9_A 105 MFVDPSLTVRADIAGRYSNRLYTYEPRDLPLLIENMKKALRL 146 (151)
T ss_dssp EEECTTSCBCTTCCCSCTTSTTCCCGGGHHHHHHHHHHHHSC
T ss_pred EEECCCCCEEEEEeCCcCCcccccchhhHHHHHHHHHHHHHH
Confidence 999999999863 24322 11224445899999999988764
No 15
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=99.55 E-value=5.9e-14 Score=159.86 Aligned_cols=147 Identities=16% Similarity=0.200 Sum_probs=121.8
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEeecCCCCCCCCCcccHHH
Q 005023 417 WNGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPSKAPGFLDDYAF 496 (718)
Q Consensus 417 WNgl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~~g~~~~~~~l~DyA~ 496 (718)
-||+||+|||.|++++.+.. ++.++||+.|+++++|+.++.. ++ +++|. .+++||| +
T Consensus 251 ~agl~aAALA~Asrvf~d~~-----------~~a~~~L~aA~~a~~fa~~~~~-----~y---~~~g~---~~~~De~-~ 307 (586)
T 3h7l_A 251 GGGVAIAALAAASRLGVHGE-----------YDQQKYRNAAENGYWHLKEHNT-----QY---LNDGE---ENIIDEY-C 307 (586)
T ss_dssp THHHHHHHHHHHTTSSSCSS-----------SCHHHHHHHHHHHHHHHHHHHH-----HH---STTSC---CCHHHHH-H
T ss_pred cHHHHHHHHHHHhcccCCCC-----------cChHHHHHHHHHHHHHHHhcCc-----cc---cCCCC---ccchhHH-H
Confidence 48999999999999965421 1137899999999999998842 11 23443 6889999 8
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcccccCCccccCCCCCCccccccccCCCCCCCChHHHHHHHHHHHHHHh
Q 005023 497 LISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIV 576 (718)
Q Consensus 497 li~all~LYeaTgd~~~L~~A~~L~~~~~~~F~D~~~Gg~f~t~~~~~~l~~r~k~~~D~a~PS~ns~~a~~LlrL~~lt 576 (718)
+++|+++||++|+|+.||+.|.++.+.+.++|++.+.|+||++..++ |.|+.+|++ .|++.+.+|++|..++
T Consensus 308 ~~WAA~eLy~ATgd~~YL~~a~~~a~~l~~~~~~~~~~g~~w~~~d~-----~~r~~~d~a---~~gl~~iaLl~l~~~~ 379 (586)
T 3h7l_A 308 ALLASVELFKATKETRYLEESRLWAQRLVARQMSDEQIQHFWSANQD-----GSRPYFHAA---EAGLPTIALCEYLAIE 379 (586)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTEECCSSCSSEEBSSSS-----SSSBCCCTT---TTTHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccCCccCCCcCCCccc-----CCccccccc---ccHHHHHHHHHhhhhc
Confidence 99999999999999999999999999999999988888999987654 688999987 6899999999999999
Q ss_pred CCCCchHHHHHHHHHHHHHHH
Q 005023 577 AGSKSDYYRQNAEHSLAVFET 597 (718)
Q Consensus 577 ~~~~~~~y~e~a~~~l~~~~~ 597 (718)
++ ..++++++++|.....
T Consensus 380 ~d---~~~~~~a~~~i~~~~d 397 (586)
T 3h7l_A 380 DD---SVQTESVKCIVNRACE 397 (586)
T ss_dssp CS---TTTTHHHHHHHHHHHH
T ss_pred CC---hHHHHHHHHHHHHHhh
Confidence 85 4567777777777655
No 16
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.45 E-value=1.4e-13 Score=132.97 Aligned_cols=111 Identities=16% Similarity=0.278 Sum_probs=88.1
Q ss_pred hhHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchH------------------H
Q 005023 3 RRSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVD------------------K 61 (718)
Q Consensus 3 ~~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d------------------~ 61 (718)
+++++.|++++|+||+ .+||++|+.|+.++|+++++.+.++++|+.|+||.++.+++. .
T Consensus 37 ~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (172)
T 3f9u_A 37 DLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKTPLTEPVKIMENGTERTLRTVGD 116 (172)
T ss_dssp HHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCCEEEEEEEEEETTEEEEEEEHHH
T ss_pred HHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcccccchhhhhhhcchhhhhhhhhh
Confidence 5789999999999977 499999999999999999999999999999999999887551 1
Q ss_pred HHHHHHHHhcCCCCCCcEEEeCCCCceeec-ccccC-CCCCCCcccHHHHHHHHHHHHhh
Q 005023 62 VYMTYVQALYGGGGWPLSVFLSPDLKPLMG-GTYFP-PEDKYGRPGFKTILRKVKDAWDK 119 (718)
Q Consensus 62 ~y~~~~q~~~g~~GwP~~vfl~p~g~p~~~-~~y~p-~~~~~~~~~f~~~L~~i~~~w~~ 119 (718)
.........+|+.|+|+++|++++|+++.. .+|.+ ++ .|.+.|+++.+.+++
T Consensus 117 ~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~------~l~~~l~~~l~~~~~ 170 (172)
T 3f9u_A 117 KWSYLQRVKFGANAQPFYVLIDNEGNPLNKSYAYDEDIS------KYINFLQTGLENYRK 170 (172)
T ss_dssp HHHHHHHHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHH------HHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHcCCCCcceEEEECCCCCEEeeccCCCCCHH------HHHHHHHHHHHHhhc
Confidence 111111124788999999999999999864 36665 33 688888887666654
No 17
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=99.38 E-value=2.7e-12 Score=138.99 Aligned_cols=141 Identities=17% Similarity=0.074 Sum_probs=118.0
Q ss_pred chHHHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEeecCCCCCCCCCcccHH
Q 005023 416 SWNGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPSKAPGFLDDYA 495 (718)
Q Consensus 416 ~WNgl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~~g~~~~~~~l~DyA 495 (718)
-||+.|+.+|..++++++| ++|++.|.+++.++...- ++.+ ..++.|||+
T Consensus 46 WW~a~~~~~l~d~~~~tgd----------------~~y~~~a~~~~~~~~~~~----~~~~----------~~~~~DD~a 95 (349)
T 3k7x_A 46 WWLAHLVEVRLDAYLRTKK----------------QADLEVAEKTYLHNKNRN----GGTL----------IHDFYDDML 95 (349)
T ss_dssp HHHHHHHHHHHHHHHHHCC----------------HHHHHHHHHHHHHHHHHT----TSSS----------CCSBHHHHH
T ss_pred cHHHHHHHHHHHHHHHhCC----------------HHHHHHHHHHHHHHHhcC----CCCC----------CccCccHHH
Confidence 5999999999999999998 899999999999987641 2211 356789999
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhccccc-CCccccCCCCCCccccccccCCCCCCCChHHHHHHHHHHHHH
Q 005023 496 FLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDRE-GGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLAS 574 (718)
Q Consensus 496 ~li~all~LYeaTgd~~~L~~A~~L~~~~~~~F~D~~-~Gg~f~t~~~~~~l~~r~k~~~D~a~PS~ns~~a~~LlrL~~ 574 (718)
|.+.+++++|++|++++||+.|+++++.+...+||+. +||+|++.. +..+++++ +|+.++.++.+|++
T Consensus 96 ~~~la~~~aye~t~~~~yL~~A~~l~~~l~~~~wd~~~gGGi~W~~~---------~~~~knai--sN~~~~~~la~l~~ 164 (349)
T 3k7x_A 96 WNALAAYRLYKATGKSIYLEDAQLVWQDLVDTGWNDIMGGGFAWRRP---------QMYYKNTP--VNAPFIILSCWLYN 164 (349)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCSGGGSCBEEETT---------EEEEEEHH--HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCchHHHHHHHHHHHHHHhCCCCCCCCceEecCC---------Cccccchh--hHHHHHHHHHHHHH
Confidence 9999999999999999999999999999954556654 788888642 12345544 89999999999999
Q ss_pred HhCCCCchHHHHHHHHHHHHHHHHHH
Q 005023 575 IVAGSKSDYYRQNAEHSLAVFETRLK 600 (718)
Q Consensus 575 lt~~~~~~~y~e~a~~~l~~~~~~i~ 600 (718)
+|++ +.|++.|++++.-+...+.
T Consensus 165 ~tgd---~~Yl~~A~~~~~w~~~~l~ 187 (349)
T 3k7x_A 165 ELNE---TKYLEWAMKTYEWQTKVLV 187 (349)
T ss_dssp HHCC---HHHHHHHHHHHHHHHHHHB
T ss_pred HhCC---HHHHHHHHHHHHHHHhcCC
Confidence 9996 8999999999998877653
No 18
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=99.32 E-value=2.2e-11 Score=133.52 Aligned_cols=177 Identities=12% Similarity=0.127 Sum_probs=137.7
Q ss_pred cCCCHHHHHHHHHHHHHHHHhhhcc------CCC--CCCCchhhhchH---HHHHHHHHHHHHHhhhhhhhhcccCCCCC
Q 005023 379 LGMPLEKYLNILGECRRKLFDVRSK------RPR--PHLDDKVIVSWN---GLVISSFARASKILKSEAESAMFNFPVVG 447 (718)
Q Consensus 379 ~g~~~~~~~~~l~~~r~~L~~~R~~------R~~--P~~Ddkilt~WN---gl~I~ALa~A~~~~~d~~~~~~~~~~~~~ 447 (718)
.+++.+++++.|+.++++|.+.|.. |.+ |.+|+|++++|| |+++.+|..+|+++||
T Consensus 20 ~~~~~~~~~~~l~~~~~~l~~~~~~~~~f~~~~~~~~~~d~k~~~~W~Wt~G~~~~gl~~~ye~Tgd------------- 86 (382)
T 3pmm_A 20 RFIARSELQALIRNVTQNLVNIKDESGQFLLRLDDGRVIDTKGWAGWEWTHGVGLYGIYQYYQQTGD------------- 86 (382)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHCCCTTCTTCEECTTSCEECSSSTTSCSHHHHHHHHHHHHHHHHHCC-------------
T ss_pred hcCCHHHHHHHHHHHHHHHHhccCccccccccCCccccccCCCCcCccccHHHHHHHHHHHHHHHCC-------------
Confidence 4678899999999999999999876 555 789999999999 9999999999999998
Q ss_pred CChHHHHHHHHHHHHHHHHhccccCCCeEEEeecCCCCCCCCCcccHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh
Q 005023 448 SDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPSKAPGFLDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDEL 527 (718)
Q Consensus 448 ~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~~g~~~~~~~l~DyA~li~all~LYeaTgd~~~L~~A~~L~~~~~~~ 527 (718)
++|++.|++.++.+.+. ++.+ ...+|++++ .+++++|+.|+|++|++.|+++++.+.+.
T Consensus 87 ---~~y~~~a~~~~~~~~~~-----~~~~------------~n~D~~~~~-~~l~~lY~~Tgd~~Yl~~a~~~ad~L~~~ 145 (382)
T 3pmm_A 87 ---IEMRDIIDRWFADRFAE-----GATT------------KNVNTMAPF-LTLAYRFEETGRMAYLPWLESWAEWAMHE 145 (382)
T ss_dssp ---HHHHHHHHHHHHHHHHH-----CCCC------------CCTTTTTTH-HHHHHHHHHHCCGGGHHHHHHHHHHHHHT
T ss_pred ---HHHHHHHHHHHHHHHcC-----CCCc------------CcccchHHH-HHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 89999999987755432 2211 245677665 48999999999999999999999999888
Q ss_pred cccccCCccccCCCCCCccccccccCCCCCCCChHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHH
Q 005023 528 FLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAGSKSDYYRQNAEHSLAVFETRLK 600 (718)
Q Consensus 528 F~D~~~Gg~f~t~~~~~~l~~r~k~~~D~a~PS~ns~~a~~LlrL~~lt~~~~~~~y~e~a~~~l~~~~~~i~ 600 (718)
+.+.+.|+|+....+... ...-..| +..+.+..|.+++++||+ +.|.+.|.+-+..+...+.
T Consensus 146 ~~r~~~Ggf~~~~~~~~~---~~~~WiD-----gl~M~~p~La~~~~~tgd---~~y~d~A~~q~~~~~~~l~ 207 (382)
T 3pmm_A 146 MPRTEQGGMQHMTLAEEN---HQQMWDD-----TLMMTVLPLAKIGKLLNR---PQYVEEATYQFLLHVQNLM 207 (382)
T ss_dssp SCBCGGGCBCCCCSSCCC---TTEEETT-----HHHHTHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHB
T ss_pred CCCCcCCCeeeecCCCCC---CCcEEec-----chhhhHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHcc
Confidence 888888888765321100 0001112 334566688999999996 8899999877777777664
No 19
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=99.26 E-value=2.8e-10 Score=124.21 Aligned_cols=252 Identities=15% Similarity=0.076 Sum_probs=174.8
Q ss_pred CCHHHHHHHHHHHHHHHhCCCcccCCCcEEEEecCCCCCCC-CCcchHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHH
Q 005023 205 EASEGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVP-HFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDY 283 (718)
Q Consensus 205 ~~~~~~~~~~~TL~~m~~gGi~D~v~GGF~RYsvD~~W~vP-HFEKmLyDnA~ll~~ya~Ay~~t~~~~y~~~A~~~~~~ 283 (718)
+++++++.+...-+.++. -|+. .+||.| +-+..- -| .--.+..||=++|.+++.|+++++|+.|+++|+..+++
T Consensus 105 g~~~~~~~~~~aA~~L~~--r~~~-~~g~i~-sw~~~~-~~~~~~~~iID~mmni~~L~~A~~~~gd~~y~~~A~~~a~~ 179 (377)
T 2ahf_A 105 KDESARKLALDAADVLMR--RWRA-DAGIIQ-AWGPKG-DPENGGRIIIDCLLNLPLLLWAGEQTGDPEYRRVAEAHALK 179 (377)
T ss_dssp CCHHHHHHHHHHHHHHHT--TEET-TTTEEC-CBSSTT-CTTTTTEEEGGGGGGHHHHHHHHHHHCCTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH--hCCC-CCCeEE-eccCCC-CCCCCceEEechHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 368999999999999887 4664 567776 322100 12 12368889999999999999999999999999999999
Q ss_pred HHHhccCCCCceeeeccCCcccccCcccccCCce-EeechHHHHHHhchhHHHHHHHhcccCCCCcCCCCCCCCCCccCC
Q 005023 284 LRRDMIGPGGEIFSAEDADSAETEGATRKKEGAF-YVWTSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKG 362 (718)
Q Consensus 284 l~~~m~~p~Ggf~sa~DADs~~~~~~~~~~EG~y-Y~Wt~~Ei~~~L~~~~~~~~~~~~v~~~Gn~~~~~~~dp~~~~eg 362 (718)
+++.+..++|.+|....-|. +.|.. .-|+
T Consensus 180 ~l~~~~r~dgs~~h~~~~D~---------~tG~~~~~~t----------------------------------------- 209 (377)
T 2ahf_A 180 SRRFLVRGDDSSYHTFYFDP---------ENGNAIRGGT----------------------------------------- 209 (377)
T ss_dssp HHHHTBBTTSCBCSEEEECT---------TTCCEEEEEC-----------------------------------------
T ss_pred HHHhCcCCCCCeEEEEEeeC---------CCCCeeeCCC-----------------------------------------
Confidence 99999988888877543332 01111 0011
Q ss_pred cceeeccCCchHHHHhcCCCHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhchHHHHHHHHHHHHHHhhhhhhhhccc
Q 005023 363 KNVLIELNDSSASASKLGMPLEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLVISSFARASKILKSEAESAMFN 442 (718)
Q Consensus 363 ~nvL~~~~~~~~~a~~~g~~~~~~~~~l~~~r~~L~~~R~~R~~P~~Ddkilt~WNgl~I~ALa~A~~~~~d~~~~~~~~ 442 (718)
...+.||..=+--+|.+|.||+.+++++++
T Consensus 210 ------------------------------------------~qG~~dds~WaRGqAw~i~gl~~ly~~T~d-------- 239 (377)
T 2ahf_A 210 ------------------------------------------HQGNTDGSTWTRGQAWGIYGFALNSRYLGN-------- 239 (377)
T ss_dssp ------------------------------------------SSSSSTTSCBHHHHHHHHHHHHHHHHHHTC--------
T ss_pred ------------------------------------------cCCcCCcchhHHHHHHHHHHHHHHHHHHCC--------
Confidence 112445543333479999999999999998
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhccccCCCe-EEEeecCCCCCCCCCcccHHHHHHHHHHHHHHcC-----ChHHHHH
Q 005023 443 FPVVGSDRKEYMEVAESAASFIRRHLYDEQTHR-LQHSFRNGPSKAPGFLDDYAFLISGLLDLYEFGS-----GTKWLVW 516 (718)
Q Consensus 443 ~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~-l~~~~~~g~~~~~~~l~DyA~li~all~LYeaTg-----d~~~L~~ 516 (718)
++||+.|+++++++.+++ +++|. ++++..+..+..+.-.+.-|-++.||++|++.++ +++|++.
T Consensus 240 --------~~yL~~A~~la~~~l~~~--~~d~~pywd~~~~~~~~~~~d~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~ 309 (377)
T 2ahf_A 240 --------ADLLETAKRMARHFLARV--PEDGVVYWDFEVPQEPSSYRDSSASAITACGLLEIASQLDESDPERQRFIDA 309 (377)
T ss_dssp --------HHHHHHHHHHHHHHHTTC--CTTSSCBSBTTSCCCTTSCBCHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHH
T ss_pred --------hHHHHHHHHHHHHHHHhh--HHhCCcccccCCCccCCCccCCCHHHHHHHHHHHHHHhcCccccchHHHHHH
Confidence 899999999999999998 34454 5543222222222334556788999999999996 7889999
Q ss_pred HHHHHHHHHHhccccc---CCccccCCCCCCccccccccCCCCCCCChHHHHHHHHHHHHHH
Q 005023 517 AIELQNTQDELFLDRE---GGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASI 575 (718)
Q Consensus 517 A~~L~~~~~~~F~D~~---~Gg~f~t~~~~~~l~~r~k~~~D~a~PS~ns~~a~~LlrL~~l 575 (718)
|+++++.+...+.... .+|......-+ .......|..+|.+..-.+++|.||...
T Consensus 310 A~~~l~~l~~~y~~~~~~~~~g~L~h~~~~----~~~~~~~d~~~~ygDy~~~Eal~r~~~~ 367 (377)
T 2ahf_A 310 AKTTVTALRDGYAERDDGEAEGFIRRGSYH----VRGGISPDDYTIWGDYYYLEALLRLERG 367 (377)
T ss_dssp HHHHHHHHHHHTBCCCCSSCCCSBSCBCSB----TTTTBSSSBCBHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcCCCCCCCeEEeccccc----CCCCCCCCcCccHHHHHHHHHHHHHHcC
Confidence 9999999988875432 22322211100 0001124677788888888888888763
No 20
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=99.23 E-value=2.1e-10 Score=125.80 Aligned_cols=211 Identities=11% Similarity=0.067 Sum_probs=156.7
Q ss_pred CCHHHHHHHHHHHHHHHhCCCcccCCCcEEEEecCCCCCCCCCcchHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHH
Q 005023 205 EASEGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYL 284 (718)
Q Consensus 205 ~~~~~~~~~~~TL~~m~~gGi~D~v~GGF~RYsvD~~W~vPHFEKmLyDnA~ll~~ya~Ay~~t~~~~y~~~A~~~~~~l 284 (718)
+++++++.+..+-+.++. -| +-.|||.| |.+..- -|.-..+..||-+-|.+++.|+++++|+.|+++|+..++++
T Consensus 131 g~~~~~~~~~~aA~~L~~--r~-~~~~g~iq-sw~~~~-~~~~~~~iID~~mni~~L~~A~~~~gd~~y~~~A~~ha~~~ 205 (397)
T 2zzr_A 131 GDVKALEATIKAADKLME--RY-QEKGGFIQ-AWGELG-YKEHYRLIIDCLLNIQLLFFAYEQTGDEKYRQVAVNHFYAS 205 (397)
T ss_dssp CCHHHHHHHHHHHHHHHT--TE-ETTTTEEC-CSSSTT-CGGGCEEETTHHHHTHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH--Hh-CcCCCEEE-ecccCC-CCCCCceeechHhHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 468899999999999987 56 44677776 443211 12223788999999999999999999999999999999999
Q ss_pred HHhccCCCCceeeeccCCcccccCcccccCCceE-eechHHHHHHhchhHHHHHHHhcccCCCCcCCCCCCCCCCccCCc
Q 005023 285 RRDMIGPGGEIFSAEDADSAETEGATRKKEGAFY-VWTSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGK 363 (718)
Q Consensus 285 ~~~m~~p~Ggf~sa~DADs~~~~~~~~~~EG~yY-~Wt~~Ei~~~L~~~~~~~~~~~~v~~~Gn~~~~~~~dp~~~~eg~ 363 (718)
++++..++|+.|....-|.. .|... -||
T Consensus 206 l~~~~r~dgs~~h~~~~d~~---------~G~~~~~~t------------------------------------------ 234 (397)
T 2zzr_A 206 ANNVVRDDSSAFHTFYFDPE---------TGEPLKGVT------------------------------------------ 234 (397)
T ss_dssp HHHTBCTTSCBCSEEEECTT---------TCCEEEEEC------------------------------------------
T ss_pred HHhCcCCCCCeEEEEEeeCC---------CCCcccCCc------------------------------------------
Confidence 99999888888887554421 11110 011
Q ss_pred ceeeccCCchHHHHhcCCCHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhchHHHHHHHHHHHHHHhhhhhhhhcccC
Q 005023 364 NVLIELNDSSASASKLGMPLEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLVISSFARASKILKSEAESAMFNF 443 (718)
Q Consensus 364 nvL~~~~~~~~~a~~~g~~~~~~~~~l~~~r~~L~~~R~~R~~P~~Ddkilt~WNgl~I~ALa~A~~~~~d~~~~~~~~~ 443 (718)
..-+.||..=+--+|.+|.||+.+|++++|
T Consensus 235 -----------------------------------------~qGy~dds~WaRGqAw~i~gl~~lY~~T~d--------- 264 (397)
T 2zzr_A 235 -----------------------------------------RQGYSDESSWARGQAWGIYGIPLSYRKMKD--------- 264 (397)
T ss_dssp -----------------------------------------TTSSSTTSCBHHHHHHHHHHHHHHHHHHCC---------
T ss_pred -----------------------------------------ccccCcchhhHHHHHHHHHHHHHHHHHHCC---------
Confidence 112445553333489999999999999998
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhccccCCCe-EEEeecCCCCCCCCCcccHHHHHHHHHHHHHHcCC---hH--HHHHH
Q 005023 444 PVVGSDRKEYMEVAESAASFIRRHLYDEQTHR-LQHSFRNGPSKAPGFLDDYAFLISGLLDLYEFGSG---TK--WLVWA 517 (718)
Q Consensus 444 ~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~-l~~~~~~g~~~~~~~l~DyA~li~all~LYeaTgd---~~--~L~~A 517 (718)
++||+.|+++++++.+++ +++|. ++.+..++.+..+.=.+.-|.++.||++|++.|++ .+ |++.|
T Consensus 265 -------~~yL~~A~~la~~~l~~~--~~d~~pywdt~~~~~~~~~~D~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A 335 (397)
T 2zzr_A 265 -------YQQIILFKGMTNYFLNRL--PEDKVSYWDLIFTDGSGQPRDTSATATAVCGIHEMLKYLPEVDPDKETYKYAM 335 (397)
T ss_dssp -------HHHHHHHHHHHHHHHHTC--CTTSCCBSBTTCCTTSCCCBCHHHHHHHHHHHHHHHTTSCTTCTTHHHHHHHH
T ss_pred -------HHHHHHHHHHHHHHHHhh--HHhCCccccCCCCCCCCCcCCCCHHHHHHHHHHHHHHhcCccchhhHHHHHHH
Confidence 899999999999999998 33454 55543332222222245577899999999999987 78 99999
Q ss_pred HHHHHHHHHhccc
Q 005023 518 IELQNTQDELFLD 530 (718)
Q Consensus 518 ~~L~~~~~~~F~D 530 (718)
+++++.+...+..
T Consensus 336 ~~~l~~l~~~y~~ 348 (397)
T 2zzr_A 336 HTMLRSLIEQYSN 348 (397)
T ss_dssp HHHHHHHHHHTBC
T ss_pred HHHHHHHHHHHhc
Confidence 9999998887654
No 21
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.23 E-value=3.7e-11 Score=133.38 Aligned_cols=186 Identities=11% Similarity=0.082 Sum_probs=136.5
Q ss_pred CCHHHHHHHHHHHHHHHHhhhccC------CCCCC--------------CchhhhchHHHHHHHHHHHHHHhhhhhhhhc
Q 005023 381 MPLEKYLNILGECRRKLFDVRSKR------PRPHL--------------DDKVIVSWNGLVISSFARASKILKSEAESAM 440 (718)
Q Consensus 381 ~~~~~~~~~l~~~r~~L~~~R~~R------~~P~~--------------Ddkilt~WNgl~I~ALa~A~~~~~d~~~~~~ 440 (718)
++.+++++.|+.+.++|-+.-..| ....+ +-......+|+|+.||+++++++||
T Consensus 27 ~~~~~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~Gv~l~gl~~ay~~Tgd------ 100 (445)
T 3k11_A 27 LTPEQVKKDIDRVFAYIDKETPARVVDKNTGKVITDYTAMGDEAQLERGAFRLASYEWGVTYSALIAAAETTGD------ 100 (445)
T ss_dssp CCHHHHHHHHHHHHHHHHHTSCCCEEETTTCCEECCTTTCCTTEEECCCSSCTTSHHHHHHHHHHHHHHHHHCC------
T ss_pred CCHHHHHHHHHHHHHHHhccCcceeecCCCCceeccccccccccccccCCcccCccCHHHHHHHHHHHHHHHCC------
Confidence 466788889998888887721111 01011 1111123469999999999999998
Q ss_pred ccCCCCCCChHHHHHHHHHHHHHHHHhc------cccCCCeEEEeecCCCCCCCCCcccHHHHHHHHHHHHHHcCChHHH
Q 005023 441 FNFPVVGSDRKEYMEVAESAASFIRRHL------YDEQTHRLQHSFRNGPSKAPGFLDDYAFLISGLLDLYEFGSGTKWL 514 (718)
Q Consensus 441 ~~~~~~~~~~~~~l~~A~~~~~~l~~~~------~d~~~g~l~~~~~~g~~~~~~~l~DyA~li~all~LYeaTgd~~~L 514 (718)
++|++.|++.++||.+++ ++. +|++.+.++++ . ..+++|||++++.+++++|++|++++|+
T Consensus 101 ----------~kY~~ya~~~~dfi~~~~p~~~~~~~~-~G~l~~~~r~~-~-~~~~LDD~g~~~~~Li~lY~~T~d~~yl 167 (445)
T 3k11_A 101 ----------KRYTDYVQNRFRFLAEVAPHFKRVYEE-KGKTDSQLLQI-L-TPHALDDAGAVCTAMIKLRLKDESLPVD 167 (445)
T ss_dssp ----------HHHHHHHHHHHHHHHHHHHHHHHHHHH-HSCCCHHHHHH-H-SCCSGGGTHHHHHHHHHHHHHCTTCCCH
T ss_pred ----------HHHHHHHHHHHHHHHhccchhhhhhhc-cCCeecccccc-c-CCCcchhHHHHHHHHHHHHHhcCCHHHH
Confidence 899999999999998753 343 57777777776 2 3789999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCccccCCCCCCccccccccCCCCCCCChHHHHHHHHHHHHHHhCCCCchH--HHHHHHHHH
Q 005023 515 VWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAGSKSDY--YRQNAEHSL 592 (718)
Q Consensus 515 ~~A~~L~~~~~~~F~D~~~Gg~f~t~~~~~~l~~r~k~~~D~a~PS~ns~~a~~LlrL~~lt~~~~~~~--y~e~a~~~l 592 (718)
+.|.++++.+.++|.+.++|+|+........+. .|+ ..+..--|.+++.+||+ +. |.+.|.+-+
T Consensus 168 ~~a~~~ad~L~~~~pRt~~Ggf~h~~~~~~q~W------iD~-----lyM~~pfla~~~~~tgd---~~~~y~d~A~~q~ 233 (445)
T 3k11_A 168 GLIQNYFDFIINKEYRLADGTFARNRPQRNTLW------LDD-----MFMGIPAVAQMSRYDKE---AKNKYLAEAVKQF 233 (445)
T ss_dssp HHHHHHHHHHHHTSCBCTTCCBCBCSSSTTEEE------THH-----HHHHHHHHHHHHHHCGG---GHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCceeecCCCCCceE------ecc-----hhhHHHHHHHHHHHHCC---cchHHHHHHHHHH
Confidence 999999999999999888898887532111111 121 22455568889999986 67 888887766
Q ss_pred HHHHHHH
Q 005023 593 AVFETRL 599 (718)
Q Consensus 593 ~~~~~~i 599 (718)
..+...+
T Consensus 234 ~~~~~~l 240 (445)
T 3k11_A 234 LQFADRM 240 (445)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 6665554
No 22
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.20 E-value=2e-11 Score=112.35 Aligned_cols=102 Identities=22% Similarity=0.452 Sum_probs=79.0
Q ss_pred hhHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecC---CCCcchHHHHHHHHHHhcCC---
Q 005023 3 RRSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDR---EERPDVDKVYMTYVQALYGG--- 73 (718)
Q Consensus 3 ~~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~---ee~pd~d~~y~~~~q~~~g~--- 73 (718)
+++++.|++++|++++ .+||++|+.|.. .|+++++++.++++++.|+||. ++.+++.+. +|+
T Consensus 19 ~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~-~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~--------~~v~~~ 89 (133)
T 3fk8_A 19 KKALAAGKRTHKPTLLVFGANWCTDCRALDK-SLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQA--------YGDPIQ 89 (133)
T ss_dssp HHHHHHHHHHTCCEEEEEECTTCHHHHHHHH-HHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHH--------TTCGGG
T ss_pred HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH-HhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHH--------hCCccC
Confidence 5788899999999976 389999999997 6999999999988999999999 666655444 678
Q ss_pred CCCCcEEEeCCCCceeec--ccccCCCCCCCcccHHHHHHHH
Q 005023 74 GGWPLSVFLSPDLKPLMG--GTYFPPEDKYGRPGFKTILRKV 113 (718)
Q Consensus 74 ~GwP~~vfl~p~g~p~~~--~~y~p~~~~~~~~~f~~~L~~i 113 (718)
.|+|+++|++++|+++.. ++.++.....+...+.+.|+++
T Consensus 90 ~~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 90 DGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp GCSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred CccceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHHh
Confidence 899999999999999863 3334333233344566666554
No 23
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=99.13 E-value=2.8e-10 Score=124.31 Aligned_cols=142 Identities=20% Similarity=0.236 Sum_probs=112.7
Q ss_pred hhch---HHHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEeecCCCCCCCCC
Q 005023 414 IVSW---NGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPSKAPGF 490 (718)
Q Consensus 414 lt~W---Ngl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~~g~~~~~~~ 490 (718)
-++| ||+++.+|.+++++++| ++|++.|++.++++. ++ +|++. ++.+ .
T Consensus 36 ~~~W~w~~G~~~~gl~~~y~~tgd----------------~~y~~~a~~~~~~~~----~~-~g~l~--~~~~------~ 86 (373)
T 1nc5_A 36 ANRWHYHQGVFLCGVLRLWEATGE----------------KRYFEYAKAYADLLI----DD-NGNLL--FRRD------E 86 (373)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHCC----------------HHHHHHHHHHHHHHB----CT-TCCBC--CCTT------C
T ss_pred CCCcchhHHHHHHHHHHHHHHhCC----------------HHHHHHHHHHHHHHh----CC-CCccc--CCCC------C
Confidence 5789 99999999999999998 899999999999874 32 35443 4443 2
Q ss_pred cccHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcccccCCccccCCCCCCccccccccCCCCCCCChHHHHHHHHH
Q 005023 491 LDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLV 570 (718)
Q Consensus 491 l~DyA~li~all~LYeaTgd~~~L~~A~~L~~~~~~~F~D~~~Gg~f~t~~~~~~l~~r~k~~~D~a~PS~ns~~a~~Ll 570 (718)
++||+ ++.++++||++|+|++|++.|+++.+.+..+| +.+.|+|+.+..... +...|+ ..+++..|.
T Consensus 87 lDd~~-~g~~ll~lY~~Tgd~~yl~~a~~la~~l~~~~-r~~~G~fw~~~~~~~------~~w~D~-----l~m~~p~L~ 153 (373)
T 1nc5_A 87 LDAIQ-AGLILFPLYEQTKDERYVKAAKRLRSLYGTLN-RTSEGGFWHKDGYPY------QMWLDG-----LYMGGPFAL 153 (373)
T ss_dssp GGGTG-GGGGHHHHHHHHCCHHHHHHHHHHHGGGGTSC-BCTTSCBCSCTTSTT------EEETHH-----HHHHHHHHH
T ss_pred cchHH-HHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcc-CCCCCCeeccCCCCC------eEEeCc-----HHHHHHHHH
Confidence 88998 67899999999999999999999999997777 666788877532211 112232 225677899
Q ss_pred HHHHHhCCCCchHHHHHHHHHHHHHHHHHH
Q 005023 571 RLASIVAGSKSDYYRQNAEHSLAVFETRLK 600 (718)
Q Consensus 571 rL~~lt~~~~~~~y~e~a~~~l~~~~~~i~ 600 (718)
+++++||+ ++|.+.|.+.+..+...+.
T Consensus 154 ~l~~~tgd---~~y~d~A~~~~~~~~~~l~ 180 (373)
T 1nc5_A 154 KYANLKQE---TELFDQVVLQESLMRKHTK 180 (373)
T ss_dssp HHHHHHTC---THHHHHHHHHHHHHHHHHB
T ss_pred HHHHHHCC---HHHHHHHHHHHHHHHHHhc
Confidence 99999996 7899999999999988874
No 24
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.13 E-value=1.1e-10 Score=111.06 Aligned_cols=106 Identities=15% Similarity=0.263 Sum_probs=78.6
Q ss_pred hhHHhhhhhcCCcEEE--E--cCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHH---HHHHhcCCCC
Q 005023 3 RRSFCGGTKTRRTHFL--I--NTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMT---YVQALYGGGG 75 (718)
Q Consensus 3 ~~a~~~Ak~e~K~ii~--y--~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~---~~q~~~g~~G 75 (718)
.++++.++.++|++++ + +||.+|+.|....++++++++..+.+|+.|+||.++.+++...+.. .+...+|+.|
T Consensus 37 ~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~ 116 (154)
T 2ju5_A 37 AEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTG 116 (154)
T ss_dssp HHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCCCC
Confidence 4678889999999865 3 7999999999999999999999988999999999988733211110 1112368899
Q ss_pred CCcEEEeCCCCceeecccccCCCCCCCcccHHHHHHH
Q 005023 76 WPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRK 112 (718)
Q Consensus 76 wP~~vfl~p~g~p~~~~~y~p~~~~~~~~~f~~~L~~ 112 (718)
+|+++|++++|+++...+|.|.. ...|.+.|++
T Consensus 117 ~Pt~~~~d~~G~~~~~~G~~~~~----~~~l~~~l~~ 149 (154)
T 2ju5_A 117 FPELVFIDAEGKQLARMGFEPGG----GAAYVSKVKS 149 (154)
T ss_dssp SSEEEEECTTCCEEEEECCCTTC----HHHHHHHHHH
T ss_pred CCEEEEEcCCCCEEEEecCCCCC----HHHHHHHHHH
Confidence 99999999999998643665322 2245555544
No 25
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=99.11 E-value=2.9e-09 Score=116.22 Aligned_cols=258 Identities=13% Similarity=0.127 Sum_probs=175.2
Q ss_pred CChhHHHHHHHhhhhhcccCCCCCCHHHHHHHHHHHHHHHhCCCcccCCCcEEEEecCCCCCCCCCcchHHHHHHHHHHH
Q 005023 182 PRPVEIQMMLYHSKKLEDTGKSGEASEGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVY 261 (718)
Q Consensus 182 P~~~~l~~Ll~~~~~~~~~~~~~~~~~~~~~~~~TL~~m~~gGi~D~v~GGF~RYsvD~~W~vPHFEKmLyDnA~ll~~y 261 (718)
++...+.-|+..+..+ ++++.++.+....+.+.. . +|... |..+ + + |+-.+..+|
T Consensus 42 ~~G~~~~gl~~~y~~t-------gd~~y~~~a~~~~~~~~~-----~-~g~l~-~~~~------~----l-Dd~~~g~~l 96 (373)
T 1nc5_A 42 HQGVFLCGVLRLWEAT-------GEKRYFEYAKAYADLLID-----D-NGNLL-FRRD------E----L-DAIQAGLIL 96 (373)
T ss_dssp HHHHHHHHHHHHHHHH-------CCHHHHHHHHHHHHHHBC-----T-TCCBC-CCTT------C----G-GGTGGGGGH
T ss_pred hHHHHHHHHHHHHHHh-------CCHHHHHHHHHHHHHHhC-----C-CCccc-CCCC------C----c-chHHHHHHH
Confidence 4455566677766654 358899999999888742 2 23222 2211 1 3 322367789
Q ss_pred HHHHHccCChHHHHHHHHHHHHHHHhccCCCCceeeeccCCcccccCcccccCCceEeechHHHHHHhchhHHHHHHHhc
Q 005023 262 LDAFSLTKDVFYSYICRDILDYLRRDMIGPGGEIFSAEDADSAETEGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYY 341 (718)
Q Consensus 262 a~Ay~~t~~~~y~~~A~~~~~~l~~~m~~p~Ggf~sa~DADs~~~~~~~~~~EG~yY~Wt~~Ei~~~L~~~~~~~~~~~~ 341 (718)
++.|++|+|+.|++.|.+..++|......++|||+...+ +. .-+|
T Consensus 97 l~lY~~Tgd~~yl~~a~~la~~l~~~~r~~~G~fw~~~~-~~-------------~~~w--------------------- 141 (373)
T 1nc5_A 97 FPLYEQTKDERYVKAAKRLRSLYGTLNRTSEGGFWHKDG-YP-------------YQMW--------------------- 141 (373)
T ss_dssp HHHHHHHCCHHHHHHHHHHHGGGGTSCBCTTSCBCSCTT-ST-------------TEEE---------------------
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHhccCCCCCCeeccCC-CC-------------CeEE---------------------
Confidence 999999999999999999999997755555677754210 00 0001
Q ss_pred ccCCCCcCCCCCCCCCCccCCcceeeccCCchHHHHhcCCCHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhchHHHH
Q 005023 342 LKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLV 421 (718)
Q Consensus 342 v~~~Gn~~~~~~~dp~~~~eg~nvL~~~~~~~~~a~~~g~~~~~~~~~l~~~r~~L~~~R~~R~~P~~Ddkilt~WNgl~ 421 (718)
.| . ..+.
T Consensus 142 -------------------------------------------------------------------~D-~-----l~m~ 148 (373)
T 1nc5_A 142 -------------------------------------------------------------------LD-G-----LYMG 148 (373)
T ss_dssp -------------------------------------------------------------------TH-H-----HHHH
T ss_pred -------------------------------------------------------------------eC-c-----HHHH
Confidence 11 1 1245
Q ss_pred HHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEeecCCCC----------CCCCCc
Q 005023 422 ISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPS----------KAPGFL 491 (718)
Q Consensus 422 I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~~g~~----------~~~~~l 491 (718)
+..|+++++++|| ++|++.|.+.+....++++|+++|.++|.+..... ......
T Consensus 149 ~p~L~~l~~~tgd----------------~~y~d~A~~~~~~~~~~l~D~~tGl~~h~~~~~~~~~w~d~~tg~~~~~Wa 212 (373)
T 1nc5_A 149 GPFALKYANLKQE----------------TELFDQVVLQESLMRKHTKDAKTGLFYHAWDEAKKMPWANEETGCSPEFWA 212 (373)
T ss_dssp HHHHHHHHHHHTC----------------THHHHHHHHHHHHHHHHHBCTTTSCBCSEEETTCCSTTSCTTTCBCSCCBH
T ss_pred HHHHHHHHHHHCC----------------HHHHHHHHHHHHHHHHHhcCCCCCCEEeecCCccccccccccCCCCCCccc
Confidence 7789999999998 79999999999999999999999988887643210 001112
Q ss_pred ccHHHHHHHHHHHHHH-----cCChHHHHHHHHHHHHHHHhcccccCCccccCCCCCCccccccccCCCCCCCChHHHHH
Q 005023 492 DDYAFLISGLLDLYEF-----GSGTKWLVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSV 566 (718)
Q Consensus 492 ~DyA~li~all~LYea-----Tgd~~~L~~A~~L~~~~~~~F~D~~~Gg~f~t~~~~~~l~~r~k~~~D~a~PS~ns~~a 566 (718)
-..++.+.|++++|+. ++++.|++.++++++.+..+. ++++|.|...- +.+.... .-.+-|+.++++
T Consensus 213 Rg~gW~~~gl~~~l~~lp~~~~~~~~~~~~~~~~a~~l~~~q-~~~dG~W~~~l-d~~~~~~------~~~EsSatA~~a 284 (373)
T 1nc5_A 213 RSIGWYVMSLADMIEELPKKHPNRHVWKNTLQDMIKSICRYQ-DKETGLWYQIV-DKGDRSD------NWLESSGSCLYM 284 (373)
T ss_dssp HHHHHHHHHHHHHGGGSCTTCHHHHHHHHHHHHHHHHHHTTS-CTTTSCCBSBT-TCTTSTT------CCBCHHHHHHHH
T ss_pred chHhHHHHHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHhc-CCCCCceeeec-CCCCCCC------CCccccHHHHHH
Confidence 2678999999999998 688899999999999998766 65566444211 1111000 013457888888
Q ss_pred HHHHHHHHHhCCCCchHHHHHHHHHHHHHHHH
Q 005023 567 INLVRLASIVAGSKSDYYRQNAEHSLAVFETR 598 (718)
Q Consensus 567 ~~LlrL~~lt~~~~~~~y~e~a~~~l~~~~~~ 598 (718)
-.|+++.+.--. ++.|++.|++.++.+...
T Consensus 285 y~l~~g~~~g~l--~~~Y~~~a~k~~~~l~~~ 314 (373)
T 1nc5_A 285 YAIAKGINKGYL--DRAYETTLLKAYQGLIQH 314 (373)
T ss_dssp HHHHHHHHHTSS--CGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCC--cHHHHHHHHHHHHHHHHh
Confidence 889888755211 268999999999887553
No 26
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=99.09 E-value=7.1e-09 Score=113.51 Aligned_cols=151 Identities=16% Similarity=0.183 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEeec-CCCC--CCCCCcccHH
Q 005023 419 GLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFR-NGPS--KAPGFLDDYA 495 (718)
Q Consensus 419 gl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~-~g~~--~~~~~l~DyA 495 (718)
.|.+-.|+++++++|| ++|++.|.+-+....++++|+++|.++|.+. .|.. ......-..+
T Consensus 173 ~M~~p~La~~~~~tgd----------------~~y~d~A~~q~~~~~~~l~D~~tGl~~h~~~~~~~~~~~~~~WaRG~g 236 (382)
T 3pmm_A 173 MMTVLPLAKIGKLLNR----------------PQYVEEATYQFLLHVQNLMDRETGLWFHGWNYEGRHNFARARWARGNS 236 (382)
T ss_dssp HHTHHHHHHHHHHTTC----------------HHHHHHHHHHHHHHHHHHBCTTTSCBCSEEETTTTBCTTCCCBHHHHH
T ss_pred hhhHHHHHHHHHHHCC----------------HHHHHHHHHHHHHHHHHccCCCCCCeeeeccCCCCCCCCcceeccccc
Confidence 3556789999999998 8999999999999999999999999999863 3321 1222334789
Q ss_pred HHHHHHHHHHHH-------cCChHHHHHHHHHHHHHHHhcccccCCccccCCCCCCccccccccCCCCCCCChHHHHHHH
Q 005023 496 FLISGLLDLYEF-------GSGTKWLVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVIN 568 (718)
Q Consensus 496 ~li~all~LYea-------Tgd~~~L~~A~~L~~~~~~~F~D~~~Gg~f~t~~~~~~l~~r~k~~~D~a~PS~ns~~a~~ 568 (718)
+.+.|+.+.|+. ++++.+++.++++++.+.++- + ++|.|+... ++++ ...+-|+.|+++-.
T Consensus 237 W~~~gl~~~l~~l~~p~~~~~~~~~~~~~~~~a~~~~~~q-~-~~G~W~~~~-d~~~---------~y~EsSatA~~ay~ 304 (382)
T 3pmm_A 237 WLTMVIPDFLELVDLPEGNAVRRYLITVLDAQIAALAECQ-D-DSGLWHTLL-DDPH---------SYLEASATAGFAYG 304 (382)
T ss_dssp HHHHHHHHHHHHHCCCTTCHHHHHHHHHHHHHHHHHHHHC-C-TTSCEESBT-TCTT---------SCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCcchhhHHHHHHHHHHHHHHHHHcC-C-CCCChhhcc-CCCC---------CCccccHHHHHHHH
Confidence 999999999998 567789999999999998865 5 466555332 2221 12346888899999
Q ss_pred HHHHHHHhCCCCchHHHHHHHHHHHHHHHHH
Q 005023 569 LVRLASIVAGSKSDYYRQNAEHSLAVFETRL 599 (718)
Q Consensus 569 LlrL~~lt~~~~~~~y~e~a~~~l~~~~~~i 599 (718)
|++..+.--. ++.|++.|+++++.+...+
T Consensus 305 ll~~~~~g~l--~~~Y~~~a~ka~~~l~~~i 333 (382)
T 3pmm_A 305 ILKAVRKRYV--GQHYAGVAEKAIRGIVQNI 333 (382)
T ss_dssp HHHHHHTTSS--CGGGHHHHHHHHHHHHHTB
T ss_pred HHHHHHcCCC--cHHHHHHHHHHHHHHHhhC
Confidence 9998883111 2679999999999887654
No 27
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.04 E-value=2.8e-10 Score=103.99 Aligned_cols=81 Identities=22% Similarity=0.381 Sum_probs=67.9
Q ss_pred hhHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCC--CcchHHHHHHHHHHhcCCCCCC
Q 005023 3 RRSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREE--RPDVDKVYMTYVQALYGGGGWP 77 (718)
Q Consensus 3 ~~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee--~pd~d~~y~~~~q~~~g~~GwP 77 (718)
+++++.++.++|++++ .+||++|+.|....++++++++.++.+|+.++||.++ .+++.+. +|+.|+|
T Consensus 17 ~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~--------~~v~~~P 88 (130)
T 2kuc_A 17 PEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKK--------YGVHAYP 88 (130)
T ss_dssp HHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHH--------TTCCSSC
T ss_pred HHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHH--------cCCCCCC
Confidence 4677888888999876 3899999999999999999999999999999999985 3333222 6889999
Q ss_pred cEEEeCCCCceeec
Q 005023 78 LSVFLSPDLKPLMG 91 (718)
Q Consensus 78 ~~vfl~p~g~p~~~ 91 (718)
+++|++++|+++..
T Consensus 89 t~~~~d~~G~~~~~ 102 (130)
T 2kuc_A 89 TLLFINSSGEVVYR 102 (130)
T ss_dssp EEEEECTTSCEEEE
T ss_pred EEEEECCCCcEEEE
Confidence 99999999998853
No 28
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.04 E-value=5.2e-10 Score=109.76 Aligned_cols=109 Identities=11% Similarity=0.134 Sum_probs=83.0
Q ss_pred hhHHhhh----hhcCCcEEEE---cCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHH---------HH
Q 005023 3 RRSFCGG----TKTRRTHFLI---NTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYM---------TY 66 (718)
Q Consensus 3 ~~a~~~A----k~e~K~ii~y---~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~---------~~ 66 (718)
++|+++| |+++|++++| ++|.+|++|.+++|.|++|.++||+|||...+|.+.. +.-..++ .+
T Consensus 41 ~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~nfV~w~~dv~~~-e~~~~~~~~~~~~~g~~~ 119 (178)
T 2ec4_A 41 EAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTKD-SNRARFLTMCNRHFGSVV 119 (178)
T ss_dssp HHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHHTEEEEEEECCSH-HHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHcCEEEEEEeCCCc-hhhhhhhhhhhhhhHHHH
Confidence 6899999 9999999886 8999999999999999999999999999999999874 3222111 12
Q ss_pred HHHh--cCCCCCCcEEEeCCCCc---eee-cccccCCCCCCCcccHHHHHHHHHHHHh
Q 005023 67 VQAL--YGGGGWPLSVFLSPDLK---PLM-GGTYFPPEDKYGRPGFKTILRKVKDAWD 118 (718)
Q Consensus 67 ~q~~--~g~~GwP~~vfl~p~g~---p~~-~~~y~p~~~~~~~~~f~~~L~~i~~~w~ 118 (718)
++.+ .+..++|+.+|++|.+. .+. ..|+.+++ .|++.|..+.+.|+
T Consensus 120 a~~~~~~~~~~~P~l~ii~~~~~~~~vl~~~~G~~~~~------~ll~~L~~~~e~~~ 171 (178)
T 2ec4_A 120 AQTIRTQKTDQFPLFLIIMGKRSSNEVLNVIQGNTTVD------ELMMRLMAAMEIFT 171 (178)
T ss_dssp HHHHHHSCSTTCSEEEEECCCSSCCCEEEEECSCCCHH------HHHHHHHHHHHHHH
T ss_pred HHHHhhcCCCCCCeEEEEEcCCCceEEEEEEeCCCCHH------HHHHHHHHHHHHhh
Confidence 2222 47789999999999864 332 23555554 68887777766665
No 29
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.00 E-value=6.8e-09 Score=115.27 Aligned_cols=268 Identities=12% Similarity=0.124 Sum_probs=188.6
Q ss_pred CCChhHHHHHHHhhhhhcccCCCCCCHHHHHHHHHHHHHHHhCC-----CcccCCCcE-EEEecCCCCCCCCCcchHHHH
Q 005023 181 FPRPVEIQMMLYHSKKLEDTGKSGEASEGQKMVLFTLQCMAKGG-----IHDHVGGGF-HRYSVDERWHVPHFEKMLYDQ 254 (718)
Q Consensus 181 FP~~~~l~~Ll~~~~~~~~~~~~~~~~~~~~~~~~TL~~m~~gG-----i~D~v~GGF-~RYsvD~~W~vPHFEKmLyDn 254 (718)
+|+...+.-|++.+..+ ++++.++.+.+..+.+..+- .+|. +|+. +||.- +.-|+ .|-|.
T Consensus 82 y~~Gv~l~gl~~ay~~T-------gd~kY~~ya~~~~dfi~~~~p~~~~~~~~-~G~l~~~~r~---~~~~~---~LDD~ 147 (445)
T 3k11_A 82 YEWGVTYSALIAAAETT-------GDKRYTDYVQNRFRFLAEVAPHFKRVYEE-KGKTDSQLLQ---ILTPH---ALDDA 147 (445)
T ss_dssp HHHHHHHHHHHHHHHHH-------CCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HSCCCHHHHH---HHSCC---SGGGT
T ss_pred cCHHHHHHHHHHHHHHH-------CCHHHHHHHHHHHHHHHhccchhhhhhhc-cCCeeccccc---ccCCC---cchhH
Confidence 56666777777777765 35888888888887665410 2233 2333 33321 12244 47789
Q ss_pred HHHHHHHHHHHHccCChHHHHHHHHHHHHHHHhcc-CCCCceeeeccCCcccccCcccccCCceEeechHHHHHHhchhH
Q 005023 255 GQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMI-GPGGEIFSAEDADSAETEGATRKKEGAFYVWTSKEVEDILGEHA 333 (718)
Q Consensus 255 A~ll~~ya~Ay~~t~~~~y~~~A~~~~~~l~~~m~-~p~Ggf~sa~DADs~~~~~~~~~~EG~yY~Wt~~Ei~~~L~~~~ 333 (718)
|.++.++.++|+.|+++.|++.|.+.++||.+.+. .++|||+.. +.. + .-+|-
T Consensus 148 g~~~~~Li~lY~~T~d~~yl~~a~~~ad~L~~~~pRt~~Ggf~h~---~~~---------~--~q~Wi------------ 201 (445)
T 3k11_A 148 GAVCTAMIKLRLKDESLPVDGLIQNYFDFIINKEYRLADGTFARN---RPQ---------R--NTLWL------------ 201 (445)
T ss_dssp HHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHTSCBCTTCCBCBC---SSS---------T--TEEET------------
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHcCCCCCCCceeec---CCC---------C--CceEe------------
Confidence 99999999999999999999999999999999874 567888763 100 0 00111
Q ss_pred HHHHHHhcccCCCCcCCCCCCCCCCccCCcceeeccCCchHHHHhcCCCHHHHHHHHHHHHHHHHhhhccCCCCCCCchh
Q 005023 334 ILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLEKYLNILGECRRKLFDVRSKRPRPHLDDKV 413 (718)
Q Consensus 334 ~~~~~~~~v~~~Gn~~~~~~~dp~~~~eg~nvL~~~~~~~~~a~~~g~~~~~~~~~l~~~r~~L~~~R~~R~~P~~Ddki 413 (718)
|.
T Consensus 202 ----------------------------------------------------------------------------D~-- 203 (445)
T 3k11_A 202 ----------------------------------------------------------------------------DD-- 203 (445)
T ss_dssp ----------------------------------------------------------------------------HH--
T ss_pred ----------------------------------------------------------------------------cc--
Confidence 10
Q ss_pred hhchHHHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHH--HHHHHHHHHHHHHHhccccCCCeEEEeecCCCCCCC--C
Q 005023 414 IVSWNGLVISSFARASKILKSEAESAMFNFPVVGSDRKE--YMEVAESAASFIRRHLYDEQTHRLQHSFRNGPSKAP--G 489 (718)
Q Consensus 414 lt~WNgl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~--~l~~A~~~~~~l~~~~~d~~~g~l~~~~~~g~~~~~--~ 489 (718)
..|.+--|++++.++++ ++ |++.|.+-+....++++|+++|.++|.+........ .
T Consensus 204 ----lyM~~pfla~~~~~tgd----------------~~~~y~d~A~~q~~~~~~~l~D~~tGL~~Hg~~~~~~~~~~~~ 263 (445)
T 3k11_A 204 ----MFMGIPAVAQMSRYDKE----------------AKNKYLAEAVKQFLQFADRMFIPEKGLYRHGWVESSTDHPAFC 263 (445)
T ss_dssp ----HHHHHHHHHHHHHHCGG----------------GHHHHHHHHHHHHHHHHHHHEETTTTEECSEEETTCSSCCCCC
T ss_pred ----hhhHHHHHHHHHHHHCC----------------cchHHHHHHHHHHHHHHHhcccCCCCCEeeeecCCCCCCCcce
Confidence 13556789999999998 67 999999999999999999999999998754322112 2
Q ss_pred CcccHHHHHHHHHHHHHH-----cCChHHHHHHHHHHHHHHHhcccccCCccccCCCCCCccccccccCCCCCCCChHHH
Q 005023 490 FLDDYAFLISGLLDLYEF-----GSGTKWLVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSV 564 (718)
Q Consensus 490 ~l~DyA~li~all~LYea-----Tgd~~~L~~A~~L~~~~~~~F~D~~~Gg~f~t~~~~~~l~~r~k~~~D~a~PS~ns~ 564 (718)
..-..++.+.|++++++. ++.+.+++..+++++.+..+- + ++|.|+...+ ++. -..+-|+.|+
T Consensus 264 WaRGnGW~~~gl~~~l~~lp~~~~~r~~l~~~~~~~a~~l~~~Q-~-~~G~W~~vld-~~~---------~y~EsSaTAm 331 (445)
T 3k11_A 264 WARANGWALLTACELLDVLPEDYPQRPKVMDYFRAHVRGVTALQ-S-GEGFWHQLLD-CND---------SYLETSATAI 331 (445)
T ss_dssp BHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHTTC-C-TTSCEESBTT-CTT---------SCEEHHHHHH
T ss_pred ecccchHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHhC-C-CCCchhhccC-CCC---------CCCCccHHHH
Confidence 233689999999999997 667789999999999998754 5 3665554322 111 1235688888
Q ss_pred HHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHH
Q 005023 565 SVINLVRLASIVAGSKSDYYRQNAEHSLAVFETRL 599 (718)
Q Consensus 565 ~a~~LlrL~~lt~~~~~~~y~e~a~~~l~~~~~~i 599 (718)
++-.|++..+. |--..+.|+..|++.++.+...+
T Consensus 332 faygllkgvr~-G~Ld~~~Y~~~A~ka~~~L~~~i 365 (445)
T 3k11_A 332 YVYCLAHAINK-GWIDAIAYGPVAQLGWHAVAGKI 365 (445)
T ss_dssp HHHHHHHHHHH-TSSCHHHHHHHHHHHHHHHHTTB
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHhC
Confidence 88899888775 32112579999999999876543
No 30
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=98.94 E-value=1.8e-09 Score=99.94 Aligned_cols=90 Identities=20% Similarity=0.243 Sum_probs=68.6
Q ss_pred CCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCcee
Q 005023 13 RRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPL 89 (718)
Q Consensus 13 ~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p~ 89 (718)
+|++++ .+||.+|+.|....|+++++++.++ +++.++||.++..+-.....+ -+|+.|+|+++|++++|+++
T Consensus 31 ~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~-~~~~~~vd~~~~~~~~~~l~~----~~~v~~~Pt~~~~d~~G~~v 105 (134)
T 2fwh_A 31 GKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA-DTVLLQANVTANDAQDVALLK----HLNVLGLPTILFFDGQGQEH 105 (134)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT-TSEEEEEECTTCCHHHHHHHH----HTTCCSSSEEEEECTTSCBC
T ss_pred CCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc-CcEEEEEeCCCCcchHHHHHH----HcCCCCCCEEEEECCCCCEe
Confidence 788866 3899999999999999999999887 499999999776443333222 26889999999999999997
Q ss_pred --e-cccccCCCCCCCcccHHHHHHHH
Q 005023 90 --M-GGTYFPPEDKYGRPGFKTILRKV 113 (718)
Q Consensus 90 --~-~~~y~p~~~~~~~~~f~~~L~~i 113 (718)
. ..++.+++ .|.+.|+.+
T Consensus 106 ~~~~~~G~~~~~------~l~~~l~~~ 126 (134)
T 2fwh_A 106 PQARVTGFMDAE------TFSAHLRDR 126 (134)
T ss_dssp GGGCBCSCCCHH------HHHHHHHHC
T ss_pred eeeeeeeccCHH------HHHHHHHhc
Confidence 2 34555543 466665543
No 31
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.45 E-value=1.1e-10 Score=106.77 Aligned_cols=96 Identities=25% Similarity=0.349 Sum_probs=74.4
Q ss_pred hhHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCC--CCcchHHHHHHHHHHhcCCCCCC
Q 005023 3 RRSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDRE--ERPDVDKVYMTYVQALYGGGGWP 77 (718)
Q Consensus 3 ~~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~e--e~pd~d~~y~~~~q~~~g~~GwP 77 (718)
+++++.|++++|++|+ .+||++|+.|....|.++++++.++.+|+.++||.+ +.+++.+. +|+.|+|
T Consensus 9 ~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~--------~~v~~~P 80 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARR--------YRVPGTP 80 (130)
Confidence 4688999999999866 489999999999999999999999998999999984 55555444 5678999
Q ss_pred cEEEeCCC-Cce--eec-ccccCCCCCCCcccHHHHHHH
Q 005023 78 LSVFLSPD-LKP--LMG-GTYFPPEDKYGRPGFKTILRK 112 (718)
Q Consensus 78 ~~vfl~p~-g~p--~~~-~~y~p~~~~~~~~~f~~~L~~ 112 (718)
+++|++|+ |++ +.. .++.+++ .|.+.|++
T Consensus 81 t~~~~d~~~G~~~~~~~~~G~~~~~------~l~~~l~~ 113 (130)
T 2lst_A 81 TFVFLVPKAGAWEEVGRLFGSRPRA------EFLKELRQ 113 (130)
Confidence 99999985 887 532 3445543 45555543
No 32
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=98.66 E-value=8.9e-09 Score=93.90 Aligned_cols=81 Identities=11% Similarity=0.046 Sum_probs=62.9
Q ss_pred EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCC--cchHHHHHHHHHHhcCCCCCCcEEEeCCCCceeec-cccc
Q 005023 19 INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREER--PDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLMG-GTYF 95 (718)
Q Consensus 19 y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~--pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p~~~-~~y~ 95 (718)
..||.||+.|+++++.+.++.+.+. .+..++||+++. +++... +++.|.||.||+. +|+++.. .+|.
T Consensus 27 A~wC~~Ck~~~~~i~~~~~~~a~~~-~~~l~~vdv~~~~~~~la~~--------~~V~g~PT~i~f~-~G~ev~Ri~G~~ 96 (116)
T 3dml_A 27 QPGCLYCARWDAEIAPQYPLTDEGR-AAPVQRLQMRDPLPPGLELA--------RPVTFTPTFVLMA-GDVESGRLEGYP 96 (116)
T ss_dssp CTTCHHHHHHHHHTTTTGGGSHHHH-HSCEEEEETTSCCCTTCBCS--------SCCCSSSEEEEEE-TTEEEEEEECCC
T ss_pred CCCCHHHHHHHHHHHhhHHHhhhcc-cceEEEEECCCCCchhHHHH--------CCCCCCCEEEEEE-CCEEEeeecCCC
Confidence 4899999999999999988766654 355666666664 455543 5788999999999 9999864 4788
Q ss_pred CCCCCCCcccHHHHHHHHHH
Q 005023 96 PPEDKYGRPGFKTILRKVKD 115 (718)
Q Consensus 96 p~~~~~~~~~f~~~L~~i~~ 115 (718)
|++ .|++.|+++..
T Consensus 97 ~~~------~f~~~L~~~l~ 110 (116)
T 3dml_A 97 GED------FFWPMLARLIG 110 (116)
T ss_dssp CHH------HHHHHHHHHHH
T ss_pred CHH------HHHHHHHHHHh
Confidence 876 79888887643
No 33
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=98.57 E-value=5.3e-08 Score=88.42 Aligned_cols=72 Identities=22% Similarity=0.280 Sum_probs=57.8
Q ss_pred hhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEec--CCCCcchHHHHHHHHHHhcCCCCCCcEEEe
Q 005023 8 GGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVD--REERPDVDKVYMTYVQALYGGGGWPLSVFL 82 (718)
Q Consensus 8 ~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD--~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl 82 (718)
.+.+++|++++ .+||++|+.|.... .++++.++.++..++|| .++.+++.+. +|+.|+|+++|+
T Consensus 21 ~~~~~~k~~lv~f~a~wC~~C~~~~~~l---~~~~~~~~~~v~~~~v~~~~d~~~~~~~~--------~~v~~~Pt~~~~ 89 (126)
T 2l57_A 21 EEAKEGIPTIIMFKTDTCPYCVEMQKEL---SYVSKEREGKFNIYYARLEEEKNIDLAYK--------YDANIVPTTVFL 89 (126)
T ss_dssp TTCCSSSCEEEEEECSSCHHHHHHHHHH---HHHHHHSSSSCEEEEEETTSSHHHHHHHH--------TTCCSSSEEEEE
T ss_pred HHHhCCCcEEEEEECCCCccHHHHHHHH---HHHHHHhcCCeEEEEEeCCCCchHHHHHH--------cCCcceeEEEEE
Confidence 56678888866 38999999998754 56777776779999999 7776555443 688999999999
Q ss_pred CCCCceee
Q 005023 83 SPDLKPLM 90 (718)
Q Consensus 83 ~p~g~p~~ 90 (718)
+++|+++.
T Consensus 90 ~~~G~~~~ 97 (126)
T 2l57_A 90 DKEGNKFY 97 (126)
T ss_dssp CTTCCEEE
T ss_pred CCCCCEEE
Confidence 99999875
No 34
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=98.54 E-value=5.9e-08 Score=84.69 Aligned_cols=75 Identities=17% Similarity=0.269 Sum_probs=60.9
Q ss_pred hHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEE
Q 005023 4 RSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSV 80 (718)
Q Consensus 4 ~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~v 80 (718)
+.++.+.+++|+++. .+||++|+.|.... .++++.+..++..++||.++.+++.+. +|..|+|+.+
T Consensus 8 ~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l---~~~~~~~~~~v~~~~v~~~~~~~~~~~--------~~v~~~Pt~~ 76 (105)
T 1nsw_A 8 ANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVL---EEFAEAHADKVTVAKLNVDENPETTSQ--------FGIMSIPTLI 76 (105)
T ss_dssp TTHHHHHSSSSCEEEEEECTTCHHHHHHHHHH---HHHHHHSTTTCEEEEEETTTCHHHHHH--------TTCCSSSEEE
T ss_pred HhHHHHHhCCCcEEEEEECCCCHHHHHHHHHH---HHHHHHhcCCcEEEEEECcCCHHHHHH--------cCCccccEEE
Confidence 456777888899865 38999999998653 567777777799999999998766554 6889999999
Q ss_pred EeCCCCceee
Q 005023 81 FLSPDLKPLM 90 (718)
Q Consensus 81 fl~p~g~p~~ 90 (718)
|+ ++|+++.
T Consensus 77 ~~-~~G~~~~ 85 (105)
T 1nsw_A 77 LF-KGGRPVK 85 (105)
T ss_dssp EE-ETTEEEE
T ss_pred EE-eCCeEEE
Confidence 99 8999875
No 35
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=98.53 E-value=9.2e-08 Score=88.45 Aligned_cols=74 Identities=15% Similarity=0.236 Sum_probs=60.1
Q ss_pred cCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCce
Q 005023 12 TRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKP 88 (718)
Q Consensus 12 e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p 88 (718)
.+|++++ .+||++|+.|.... .++++.++.++..++||.++.+++.+. +|+.|+|+++|++++|++
T Consensus 50 ~~k~vlv~f~a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~--------~~v~~~Pt~~~~~~~g~~ 118 (141)
T 3hxs_A 50 GDKPAIVDFYADWCGPCKMVAPIL---EELSKEYAGKIYIYKVNVDKEPELARD--------FGIQSIPTIWFVPMKGEP 118 (141)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHH---HHHHHHTTTTCEEEEEETTTCHHHHHH--------TTCCSSSEEEEECSSSCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHH---HHHHHHhcCceEEEEEECCCCHHHHHH--------cCCCCcCEEEEEeCCCCE
Confidence 5788866 38999999998654 777888887899999999998876654 688999999999999998
Q ss_pred eecccccC
Q 005023 89 LMGGTYFP 96 (718)
Q Consensus 89 ~~~~~y~p 96 (718)
....++.+
T Consensus 119 ~~~~G~~~ 126 (141)
T 3hxs_A 119 QVNMGALS 126 (141)
T ss_dssp EEEESCCC
T ss_pred EEEeCCCC
Confidence 75444444
No 36
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=98.52 E-value=1.3e-07 Score=87.34 Aligned_cols=74 Identities=22% Similarity=0.364 Sum_probs=58.0
Q ss_pred cCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCce
Q 005023 12 TRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKP 88 (718)
Q Consensus 12 e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p 88 (718)
.+|++++ .+||++|+.|... | .++++.++.++..++||.++.+++.+. +|+.|+|+++|++++|++
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~-l--~~l~~~~~~~v~~~~vd~~~~~~l~~~--------~~v~~~Pt~~~~~~~G~~ 105 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPI-L--DELAKEYDGQIVIYKVDTEKEQELAGA--------FGIRSIPSILFIPMEGKP 105 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHH-H--HHHHHHTTTTCEEEEEETTTCHHHHHH--------TTCCSSCEEEEECSSSCC
T ss_pred CCCEEEEEEECCcCHHHHHHHHH-H--HHHHHHhcCCEEEEEEeCCCCHHHHHH--------cCCCCCCEEEEECCCCcE
Confidence 5788765 3899999999864 3 567777777899999999998766554 688999999999999998
Q ss_pred eecccccC
Q 005023 89 LMGGTYFP 96 (718)
Q Consensus 89 ~~~~~y~p 96 (718)
+...++.+
T Consensus 106 ~~~~G~~~ 113 (136)
T 2l5l_A 106 EMAQGAMP 113 (136)
T ss_dssp EEEESCCC
T ss_pred EEEeCCCC
Confidence 74333343
No 37
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.52 E-value=1.5e-07 Score=82.30 Aligned_cols=77 Identities=14% Similarity=0.212 Sum_probs=62.0
Q ss_pred hhHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcE
Q 005023 3 RRSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLS 79 (718)
Q Consensus 3 ~~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~ 79 (718)
.+.++.+.+++|++++ .+||.+|+.|... | .++++.+..++..++||.++.|++.+. +|..|+|+.
T Consensus 11 ~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~-~--~~~~~~~~~~~~~~~v~~~~~~~~~~~--------~~i~~~Pt~ 79 (109)
T 3tco_A 11 EENFDEVIRNNKLVLVDCWAEWCAPCHLYEPI-Y--KKVAEKYKGKAVFGRLNVDENQKIADK--------YSVLNIPTT 79 (109)
T ss_dssp TTTHHHHHHHSSEEEEEEECTTCHHHHHHHHH-H--HHHHHHTTTTSEEEEEETTTCHHHHHH--------TTCCSSSEE
T ss_pred HHHHHHHHhcCCeEEEEEECCCCHHHHhhhHH-H--HHHHHHhCCCceEEEEccccCHHHHHh--------cCcccCCEE
Confidence 4567777888999866 3899999999853 2 456677776799999999999877654 688999999
Q ss_pred EEeCCCCceeec
Q 005023 80 VFLSPDLKPLMG 91 (718)
Q Consensus 80 vfl~p~g~p~~~ 91 (718)
+|+ ++|+++..
T Consensus 80 ~~~-~~g~~~~~ 90 (109)
T 3tco_A 80 LIF-VNGQLVDS 90 (109)
T ss_dssp EEE-ETTEEEEE
T ss_pred EEE-cCCcEEEe
Confidence 999 99998853
No 38
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=98.52 E-value=1.5e-07 Score=83.08 Aligned_cols=75 Identities=16% Similarity=0.184 Sum_probs=57.9
Q ss_pred hHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEE
Q 005023 4 RSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSV 80 (718)
Q Consensus 4 ~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~v 80 (718)
++++.+++++|++++ .+||++|+.|... | .++++.+..++..++||.++.+++.+. +|+.|+|+.+
T Consensus 15 ~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~-l--~~~~~~~~~~~~~~~vd~~~~~~~~~~--------~~v~~~Pt~~ 83 (112)
T 1ep7_A 15 AQLAKGKEEHKPIVVDFTATWCGPCKMIAPL-F--ETLSNDYAGKVIFLKVDVDAVAAVAEA--------AGITAMPTFH 83 (112)
T ss_dssp HHHHHHHHHTCCEEEEEECTTCHHHHHHHHH-H--HHHHHHTTTTSEEEEEETTTTHHHHHH--------HTCCBSSEEE
T ss_pred HHHHhhcccCCeEEEEEECCCCHHHHHHHHH-H--HHHHHHcCCCeEEEEEECCchHHHHHH--------cCCCcccEEE
Confidence 455555556898865 3899999999864 3 457777766899999999998776654 5788999977
Q ss_pred EeCCCCceee
Q 005023 81 FLSPDLKPLM 90 (718)
Q Consensus 81 fl~p~g~p~~ 90 (718)
|+ ++|+++.
T Consensus 84 ~~-~~G~~~~ 92 (112)
T 1ep7_A 84 VY-KDGVKAD 92 (112)
T ss_dssp EE-ETTEEEE
T ss_pred EE-ECCeEEE
Confidence 77 7999875
No 39
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=98.48 E-value=2.9e-07 Score=80.61 Aligned_cols=71 Identities=14% Similarity=0.242 Sum_probs=57.9
Q ss_pred hhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCC
Q 005023 8 GGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSP 84 (718)
Q Consensus 8 ~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p 84 (718)
...+++|++++ .+||++|+.|... | .++++.++.++..++||.++.|++.+. +|..|+|+.+|+ +
T Consensus 15 ~~~~~~~~~~v~f~~~~C~~C~~~~~~-l--~~~~~~~~~~~~~~~v~~~~~~~~~~~--------~~v~~~Pt~~~~-~ 82 (108)
T 2trx_A 15 DVLKADGAILVDFWAEWCGPCKMIAPI-L--DEIADEYQGKLTVAKLNIDQNPGTAPK--------YGIRGIPTLLLF-K 82 (108)
T ss_dssp HTTTCSSEEEEEEECTTCHHHHHHHHH-H--HHHHHHTTTTEEEEEEETTTCTTHHHH--------TTCCSSSEEEEE-E
T ss_pred HHHhcCCeEEEEEECCCCHhHHHHHHH-H--HHHHHHhCCCcEEEEEECCCCHHHHHH--------cCCcccCEEEEE-e
Confidence 34567888865 4899999999865 3 567777777799999999999887665 688999999999 8
Q ss_pred CCceee
Q 005023 85 DLKPLM 90 (718)
Q Consensus 85 ~g~p~~ 90 (718)
+|+++.
T Consensus 83 ~G~~~~ 88 (108)
T 2trx_A 83 NGEVAA 88 (108)
T ss_dssp TTEEEE
T ss_pred CCEEEE
Confidence 999875
No 40
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=98.47 E-value=2.9e-07 Score=80.51 Aligned_cols=86 Identities=16% Similarity=0.215 Sum_probs=63.1
Q ss_pred hhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCC
Q 005023 9 GTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPD 85 (718)
Q Consensus 9 Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~ 85 (718)
.++++|+++. .+||++|+.|.... .++++.++.++..++||.++.+++.+. +|..|+|+.+|+ ++
T Consensus 15 ~~~~~~~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~~v~~~~~~~~~~~--------~~v~~~Pt~~~~-~~ 82 (107)
T 1dby_A 15 VLESSVPVLVDFWAPWCGPCRIIAPVV---DEIAGEYKDKLKCVKLNTDESPNVASE--------YGIRSIPTIMVF-KG 82 (107)
T ss_dssp TTTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTCEEEEEETTTCHHHHHH--------HTCCSSCEEEEE-SS
T ss_pred HhcCCCcEEEEEECCCCHhHHHHHHHH---HHHHHHhCCceEEEEEECCCCHHHHHH--------CCCCcCCEEEEE-eC
Confidence 4567888865 48999999998643 567777777799999999998776554 578899998887 79
Q ss_pred Cceeec-ccccCCCCCCCcccHHHHHHH
Q 005023 86 LKPLMG-GTYFPPEDKYGRPGFKTILRK 112 (718)
Q Consensus 86 g~p~~~-~~y~p~~~~~~~~~f~~~L~~ 112 (718)
|+++.. .++.+.+ .+.+.|++
T Consensus 83 G~~~~~~~G~~~~~------~l~~~l~~ 104 (107)
T 1dby_A 83 GKKCETIIGAVPKA------TIVQTVEK 104 (107)
T ss_dssp SSEEEEEESCCCHH------HHHHHHHH
T ss_pred CEEEEEEeCCCCHH------HHHHHHHH
Confidence 998753 3444432 45555544
No 41
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=98.46 E-value=3e-07 Score=81.75 Aligned_cols=74 Identities=19% Similarity=0.231 Sum_probs=60.5
Q ss_pred hHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEE
Q 005023 4 RSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSV 80 (718)
Q Consensus 4 ~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~v 80 (718)
+.++++. ++|++++ .+||++|+.|.... .++++.++.++..++||.++.+++.+. +|+.|+|+++
T Consensus 9 ~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l---~~~~~~~~~~v~~~~vd~~~~~~l~~~--------~~v~~~Pt~~ 76 (112)
T 2voc_A 9 QSFSAET-SEGVVLADFWAPWCGPSKMIAPVL---EELDQEMGDKLKIVKIDVDENQETAGK--------YGVMSIPTLL 76 (112)
T ss_dssp TTHHHHH-SSSEEEEEEECTTBGGGGGHHHHH---HHHHHHHTTTCEEEEEETTTCCSHHHH--------TTCCSBSEEE
T ss_pred HHHHHHh-CCCEEEEEEECCCCHHHHHHHHHH---HHHHHHhCCCcEEEEEECCCCHHHHHH--------cCCCcccEEE
Confidence 3455555 7888865 38999999998654 678888877899999999999887665 6789999999
Q ss_pred EeCCCCceee
Q 005023 81 FLSPDLKPLM 90 (718)
Q Consensus 81 fl~p~g~p~~ 90 (718)
|+ ++|+++.
T Consensus 77 ~~-~~G~~~~ 85 (112)
T 2voc_A 77 VL-KDGEVVE 85 (112)
T ss_dssp EE-ETTEEEE
T ss_pred EE-eCCEEEE
Confidence 99 9999875
No 42
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=98.45 E-value=3.7e-07 Score=80.48 Aligned_cols=93 Identities=22% Similarity=0.282 Sum_probs=65.2
Q ss_pred hhHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcE
Q 005023 3 RRSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLS 79 (718)
Q Consensus 3 ~~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~ 79 (718)
++.++.|+.++|++++ .+||++|+.|... | .++++... ++..++||.++.+++.+. +|..|+|+.
T Consensus 16 ~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~-l--~~~~~~~~-~v~~~~v~~~~~~~~~~~--------~~v~~~Pt~ 83 (113)
T 1ti3_A 16 KEHFEKGKGSQKLIVVDFTASWCPPCKMIAPI-F--AELAKKFP-NVTFLKVDVDELKAVAEE--------WNVEAMPTF 83 (113)
T ss_dssp HHHHHHHTTSSSEEEEEEECSSCHHHHHHHHH-H--HHHHHHCS-SEEEEEEETTTCHHHHHH--------HHCSSTTEE
T ss_pred HHHHHHhhhcCCeEEEEEECCCCHHHHHHHHH-H--HHHHHhCC-CcEEEEEEccccHHHHHh--------CCCCcccEE
Confidence 3566777777999865 3899999999853 2 34444443 688899999998877655 467899999
Q ss_pred EEeCCCCceeecccccCCCCCCCcccHHHHHHHHH
Q 005023 80 VFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRKVK 114 (718)
Q Consensus 80 vfl~p~g~p~~~~~y~p~~~~~~~~~f~~~L~~i~ 114 (718)
+|+ ++|+++....-..++ .+.+.|+++.
T Consensus 84 ~~~-~~G~~~~~~~g~~~~------~l~~~l~~~~ 111 (113)
T 1ti3_A 84 IFL-KDGKLVDKTVGADKD------GLPTLVAKHA 111 (113)
T ss_dssp EEE-ETTEEEEEEECCCTT------HHHHHHHHHH
T ss_pred EEE-eCCEEEEEEecCCHH------HHHHHHHHhh
Confidence 888 799987532112332 5777776553
No 43
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=98.44 E-value=1.1e-07 Score=86.94 Aligned_cols=75 Identities=16% Similarity=0.264 Sum_probs=61.7
Q ss_pred hHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEE
Q 005023 4 RSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSV 80 (718)
Q Consensus 4 ~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~v 80 (718)
+.++.+..++|++++ .+||++|+.|.... .++++.++.++..++||.++.+++.+. +|+.|+|+++
T Consensus 33 ~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l---~~~~~~~~~~v~~~~vd~d~~~~l~~~--------~~v~~~Pt~~ 101 (128)
T 3ul3_B 33 NIINGVNMKNTVIVLYFFAKWCQACTMQSTEM---DKLQKYYGKRIYLLKVDLDKNESLARK--------FSVKSLPTII 101 (128)
T ss_dssp SSSSBTTSCCSEEEEEEECTTCHHHHHHHHHH---HHHHHHHGGGEEEEEEEGGGCHHHHHH--------TTCCSSSEEE
T ss_pred cHHHHHHccCCEEEEEEECCCCHHHHHHhHHH---HHHHHHhcCCeEEEEEECCCCHHHHHH--------cCCCCcCEEE
Confidence 345667788999876 38999999998754 678888888899999999998866554 6889999999
Q ss_pred EeCCCCceee
Q 005023 81 FLSPDLKPLM 90 (718)
Q Consensus 81 fl~p~g~p~~ 90 (718)
|+ .+|+.+.
T Consensus 102 ~~-~~G~~~~ 110 (128)
T 3ul3_B 102 LL-KNKTMLA 110 (128)
T ss_dssp EE-ETTEEEE
T ss_pred EE-ECCEEEE
Confidence 99 7999875
No 44
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=98.44 E-value=3.4e-07 Score=79.76 Aligned_cols=70 Identities=16% Similarity=0.214 Sum_probs=57.5
Q ss_pred hhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCC
Q 005023 9 GTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPD 85 (718)
Q Consensus 9 Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~ 85 (718)
..+++|+++. .+||++|+.|.... .++++.+..++..++||.++.+++.+. +|..|+|+.+|+ ++
T Consensus 16 ~~~~~~~~lv~f~~~~C~~C~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~--------~~v~~~Pt~~~~-~~ 83 (107)
T 2i4a_A 16 VLKASGLVLVDFWAEWCGPCKMIGPAL---GEIGKEFAGKVTVAKVNIDDNPETPNA--------YQVRSIPTLMLV-RD 83 (107)
T ss_dssp TTTCSSEEEEEEECTTCHHHHHHHHHH---HHHHHHHTTSEEEEEEETTTCCHHHHH--------TTCCSSSEEEEE-ET
T ss_pred HHhCCCEEEEEEECCCChhHHHHhHHH---HHHHHHhCCcEEEEEEECCCCHHHHHh--------cCCCccCEEEEE-eC
Confidence 3467888865 48999999998653 578888877899999999998876654 678999999999 89
Q ss_pred Cceee
Q 005023 86 LKPLM 90 (718)
Q Consensus 86 g~p~~ 90 (718)
|+++.
T Consensus 84 G~~~~ 88 (107)
T 2i4a_A 84 GKVID 88 (107)
T ss_dssp TEEEE
T ss_pred CEEEE
Confidence 99885
No 45
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=98.42 E-value=2.7e-07 Score=80.47 Aligned_cols=75 Identities=19% Similarity=0.289 Sum_probs=60.5
Q ss_pred hHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEE
Q 005023 4 RSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSV 80 (718)
Q Consensus 4 ~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~v 80 (718)
+.++++.+++|++++ .+||++|+.|... | .++++.+..++..++||.++.+++.+. +|..|+|+.+
T Consensus 9 ~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~-l--~~~~~~~~~~~~~~~v~~~~~~~~~~~--------~~v~~~Pt~~ 77 (109)
T 2yzu_A 9 QNFDETLGQHPLVLVDFWAEWCAPCRMIAPI-L--EEIAKEYEGKLLVAKLDVDENPKTAMR--------YRVMSIPTVI 77 (109)
T ss_dssp TTHHHHHHHCSEEEEEEECTTCHHHHHHHHH-H--HHHHHHTBTTBEEEEEETTTCHHHHHH--------TTCCSSSEEE
T ss_pred hHHHHHhcCCCeEEEEEECCCCHHHHHhhHH-H--HHHHHHhhCceEEEEEECCCCHhHHHh--------CCCCcCCEEE
Confidence 445667778899865 3899999999864 3 567777877899999999998766554 6889999999
Q ss_pred EeCCCCceee
Q 005023 81 FLSPDLKPLM 90 (718)
Q Consensus 81 fl~p~g~p~~ 90 (718)
|+ ++|+++.
T Consensus 78 ~~-~~g~~~~ 86 (109)
T 2yzu_A 78 LF-KDGQPVE 86 (109)
T ss_dssp EE-ETTEEEE
T ss_pred EE-eCCcEee
Confidence 99 8999875
No 46
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=98.42 E-value=1.1e-07 Score=86.70 Aligned_cols=74 Identities=12% Similarity=0.185 Sum_probs=52.0
Q ss_pred hhhhcCCcEEE---EcCCchhhhhhccccC---c--------HHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCC
Q 005023 8 GGTKTRRTHFL---INTCHWCHVMEVESFE---D--------EGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGG 73 (718)
Q Consensus 8 ~Ak~e~K~ii~---y~~C~wChvM~~esf~---d--------~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~ 73 (718)
..++++|++++ .+||+||..|+++.|. . .++++.+..++..++||.++.+++.+. +|+
T Consensus 16 ~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~~l~~~--------~~v 87 (123)
T 1oaz_A 16 DVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPK--------YGI 87 (123)
T ss_dssp HTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCTTTGGG--------GTC
T ss_pred HHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHH--------cCC
Confidence 44678899866 3899955555555554 2 345555655799999999999988765 688
Q ss_pred CCCCcEEEeCCCCceee
Q 005023 74 GGWPLSVFLSPDLKPLM 90 (718)
Q Consensus 74 ~GwP~~vfl~p~g~p~~ 90 (718)
.|+|+.+|+ ++|+++.
T Consensus 88 ~~~Pt~~~~-~~G~~~~ 103 (123)
T 1oaz_A 88 RGIPTLLLF-KNGEVAA 103 (123)
T ss_dssp CBSSEEEEE-ESSSEEE
T ss_pred CccCEEEEE-ECCEEEE
Confidence 999999999 9999875
No 47
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=98.41 E-value=4e-07 Score=80.73 Aligned_cols=76 Identities=14% Similarity=0.134 Sum_probs=58.8
Q ss_pred hhHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcE
Q 005023 3 RRSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLS 79 (718)
Q Consensus 3 ~~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~ 79 (718)
.+-++++.+++|++++ .+||.+|+.|.... .++++.+ .++..++||.++.+++.+. +|+.|+|+.
T Consensus 14 ~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l---~~l~~~~-~~~~~~~vd~~~~~~l~~~--------~~v~~~Pt~ 81 (109)
T 3f3q_A 14 ASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMI---EKFSEQY-PQADFYKLDVDELGDVAQK--------NEVSAMPTL 81 (109)
T ss_dssp HHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHH---HHHHHHC-TTSEEEEEETTTCHHHHHH--------TTCCSSSEE
T ss_pred HHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHH---HHHHHHC-CCCEEEEEECCCCHHHHHH--------cCCCccCEE
Confidence 3567888889999976 38999999998533 4444444 3478889999998876554 688999999
Q ss_pred EEeCCCCceeec
Q 005023 80 VFLSPDLKPLMG 91 (718)
Q Consensus 80 vfl~p~g~p~~~ 91 (718)
+|+. +|+++..
T Consensus 82 ~~~~-~G~~~~~ 92 (109)
T 3f3q_A 82 LLFK-NGKEVAK 92 (109)
T ss_dssp EEEE-TTEEEEE
T ss_pred EEEE-CCEEEEE
Confidence 9997 9998753
No 48
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=98.41 E-value=5e-07 Score=86.73 Aligned_cols=78 Identities=21% Similarity=0.307 Sum_probs=56.2
Q ss_pred hhHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCC--CCCC
Q 005023 3 RRSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGG--GGWP 77 (718)
Q Consensus 3 ~~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~--~GwP 77 (718)
+++++.+..++|++|+ .+||.+|+.|.. .|++-....-.+-.||.|.+|.++.+ +... ++. .++|
T Consensus 36 ~~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p-~l~~~~~~~~~~~~~~~v~~d~~~~~-~~~~--------~~~~~~~~P 105 (164)
T 1sen_A 36 EDGKKEAAASGLPLMVIIHKSWCGACKALKP-KFAESTEISELSHNFVMVNLEDEEEP-KDED--------FSPDGGYIP 105 (164)
T ss_dssp HHHHHHHHHHTCCEEEEEECTTCHHHHHHHH-HHHTCHHHHHHHTTSEEEEEEGGGSC-SCGG--------GCTTCSCSS
T ss_pred HHHHHHHHhcCCeEEEEEECCCCHHHHHHHH-HHHHHHHHhhcCCeEEEEEecCCchH-HHHH--------hcccCCcCC
Confidence 4678889999999976 389999999997 45553222224567888888765542 3222 344 5699
Q ss_pred cEEEeCCCCceee
Q 005023 78 LSVFLSPDLKPLM 90 (718)
Q Consensus 78 ~~vfl~p~g~p~~ 90 (718)
+++|++++|+++.
T Consensus 106 t~~~~d~~G~~~~ 118 (164)
T 1sen_A 106 RILFLDPSGKVHP 118 (164)
T ss_dssp EEEEECTTSCBCT
T ss_pred eEEEECCCCCEEE
Confidence 9999999999885
No 49
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=98.41 E-value=6.2e-07 Score=78.79 Aligned_cols=75 Identities=17% Similarity=0.188 Sum_probs=59.7
Q ss_pred hHHhhhh-hcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcE
Q 005023 4 RSFCGGT-KTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLS 79 (718)
Q Consensus 4 ~a~~~Ak-~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~ 79 (718)
+.++.+. +++|++++ .+||+.|+.|.... .++++.++.++..++||.++.|++.+. +|+.|+|+.
T Consensus 12 ~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~---~~~~~~~~~~v~~~~vd~~~~~~l~~~--------~~v~~~Pt~ 80 (111)
T 3gnj_A 12 NTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVL---EELRLNYEESFGFYYVDVEEEKTLFQR--------FSLKGVPQI 80 (111)
T ss_dssp HHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHH---HHHHHHTTTTSEEEEEETTTCHHHHHH--------TTCCSSCEE
T ss_pred HHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHH---HHHHHHcCCceEEEEEECCcChhHHHh--------cCCCcCCEE
Confidence 4455555 67888865 48999999998644 677777777799999999998876654 688999999
Q ss_pred EEeCCCCceee
Q 005023 80 VFLSPDLKPLM 90 (718)
Q Consensus 80 vfl~p~g~p~~ 90 (718)
+|+ .+|+++.
T Consensus 81 ~~~-~~g~~~~ 90 (111)
T 3gnj_A 81 LYF-KDGEYKG 90 (111)
T ss_dssp EEE-ETTEEEE
T ss_pred EEE-ECCEEEE
Confidence 999 7899874
No 50
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=98.39 E-value=5.4e-07 Score=78.19 Aligned_cols=86 Identities=14% Similarity=0.197 Sum_probs=62.8
Q ss_pred hhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCC
Q 005023 9 GTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPD 85 (718)
Q Consensus 9 Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~ 85 (718)
.++.+|+++. .+||++|+.|.... .++++.++.++..++||.++.|++.+. +|..|+|+.+|+ ++
T Consensus 14 ~~~~~~~~~v~f~~~~C~~C~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~--------~~v~~~Pt~~~~-~~ 81 (105)
T 1fb6_A 14 VLESEVPVMVDFWAPWCGPCKLIAPVI---DELAKEYSGKIAVYKLNTDEAPGIATQ--------YNIRSIPTVLFF-KN 81 (105)
T ss_dssp TTTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTCEEEEEETTTCHHHHHH--------TTCCSSSEEEEE-ET
T ss_pred HhcCCCcEEEEEECCCChHHHHHHHHH---HHHHHHhcCceEEEEEcCcchHHHHHh--------CCCCcccEEEEE-eC
Confidence 4456888865 48999999998653 567777877799999999998766554 678999998777 79
Q ss_pred Cceeec-ccccCCCCCCCcccHHHHHHH
Q 005023 86 LKPLMG-GTYFPPEDKYGRPGFKTILRK 112 (718)
Q Consensus 86 g~p~~~-~~y~p~~~~~~~~~f~~~L~~ 112 (718)
|+++.. .++.+++ .|.+.|++
T Consensus 82 g~~~~~~~G~~~~~------~l~~~l~~ 103 (105)
T 1fb6_A 82 GERKESIIGAVPKS------TLTDSIEK 103 (105)
T ss_dssp TEEEEEEEECCCHH------HHHHHHHH
T ss_pred CeEEEEEecCCCHH------HHHHHHHh
Confidence 998753 3444432 45555543
No 51
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=98.38 E-value=4.6e-07 Score=82.54 Aligned_cols=75 Identities=21% Similarity=0.260 Sum_probs=57.6
Q ss_pred hhHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcE
Q 005023 3 RRSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLS 79 (718)
Q Consensus 3 ~~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~ 79 (718)
+++++.|++++|++++ .+||.+|+.|... | .++++.+. ++..++||.++.+++.+. +|+.|+|+.
T Consensus 28 ~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~-l--~~l~~~~~-~v~~~~vd~d~~~~l~~~--------~~v~~~Pt~ 95 (124)
T 1xfl_A 28 NEQLQKANESKTLVVVDFTASWCGPCRFIAPF-F--ADLAKKLP-NVLFLKVDTDELKSVASD--------WAIQAMPTF 95 (124)
T ss_dssp HHHHHHHHHTTCEEEEEEECTTCHHHHHHHHH-H--HHHHHHCS-SEEEEEEETTTSHHHHHH--------TTCCSSSEE
T ss_pred HHHHHHhhhcCCEEEEEEECCCCHHHHHHHHH-H--HHHHHHCC-CcEEEEEECccCHHHHHH--------cCCCccCEE
Confidence 3567777778999866 3899999999854 3 34555443 689999999988766554 688999998
Q ss_pred EEeCCCCceee
Q 005023 80 VFLSPDLKPLM 90 (718)
Q Consensus 80 vfl~p~g~p~~ 90 (718)
+|+ ++|+++.
T Consensus 96 ~~~-~~G~~~~ 105 (124)
T 1xfl_A 96 MFL-KEGKILD 105 (124)
T ss_dssp EEE-ETTEEEE
T ss_pred EEE-ECCEEEE
Confidence 887 8999875
No 52
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=98.37 E-value=6e-07 Score=80.83 Aligned_cols=71 Identities=14% Similarity=0.181 Sum_probs=55.8
Q ss_pred hhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCC
Q 005023 8 GGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSP 84 (718)
Q Consensus 8 ~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p 84 (718)
..++++|++++ .+||++|+.|... | .++++.+..++..++||.++.+++.+. +|+.|+|+.+|+ +
T Consensus 26 ~v~~~~k~vlv~f~a~~C~~C~~~~~~-l--~~~~~~~~~~v~~~~vd~d~~~~l~~~--------~~v~~~Pt~~~~-~ 93 (119)
T 1w4v_A 26 RVVNSETPVVVDFHAQWCGPCKILGPR-L--EKMVAKQHGKVVMAKVDIDDHTDLAIE--------YEVSAVPTVLAM-K 93 (119)
T ss_dssp HTTTCSSCEEEEEECTTCHHHHHHHHH-H--HHHHHHTTTSSEEEEEETTTTHHHHHH--------TTCCSSSEEEEE-E
T ss_pred HHHcCCCcEEEEEECCCCHHHHHHHHH-H--HHHHHHhcCCeEEEEEeCCCCHHHHHH--------cCCCcccEEEEE-e
Confidence 34567888865 3899999999864 3 456667766799999999988765544 688999999999 8
Q ss_pred CCceee
Q 005023 85 DLKPLM 90 (718)
Q Consensus 85 ~g~p~~ 90 (718)
+|+++.
T Consensus 94 ~G~~~~ 99 (119)
T 1w4v_A 94 NGDVVD 99 (119)
T ss_dssp TTEEEE
T ss_pred CCcEEE
Confidence 999875
No 53
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=98.36 E-value=5.8e-07 Score=79.37 Aligned_cols=72 Identities=17% Similarity=0.191 Sum_probs=56.1
Q ss_pred hhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeC
Q 005023 7 CGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLS 83 (718)
Q Consensus 7 ~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~ 83 (718)
+...+++|+++. .+||++|+.|... | .++++.+..++..++||.++.+++.+. +|..|+|+.+|+
T Consensus 17 ~~~~~~~~~~vv~f~~~~C~~C~~~~~~-l--~~~~~~~~~~~~~~~v~~~~~~~~~~~--------~~v~~~Pt~~~~- 84 (112)
T 1t00_A 17 QDVLKNDKPVLVDFWAAWCGPCRQIAPS-L--EAIAAEYGDKIEIVKLNIDENPGTAAK--------YGVMSIPTLNVY- 84 (112)
T ss_dssp HHTTTCSSCEEEEEECTTCHHHHHHHHH-H--HHHHHHTTTTCEEEEEETTTCHHHHHH--------TTCCSSSEEEEE-
T ss_pred HHHhhCCCeEEEEEECCCCHhHHhcCHH-H--HHHHHHhcCCeEEEEEEcCCCHHHHHh--------CCCCcccEEEEE-
Confidence 445567888865 4899999999864 3 457777766799999999998776554 688999998877
Q ss_pred CCCceee
Q 005023 84 PDLKPLM 90 (718)
Q Consensus 84 p~g~p~~ 90 (718)
++|+++.
T Consensus 85 ~~G~~~~ 91 (112)
T 1t00_A 85 QGGEVAK 91 (112)
T ss_dssp ETTEEEE
T ss_pred eCCEEEE
Confidence 7999875
No 54
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=98.36 E-value=4.2e-06 Score=95.56 Aligned_cols=184 Identities=13% Similarity=0.096 Sum_probs=130.3
Q ss_pred HHHHHHHHHHHHHHHhCCCcccCCCcEEEEecCCCCCCCCCcchH-------------------HHHHHHHHHHHHHHHc
Q 005023 207 SEGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKML-------------------YDQGQLANVYLDAFSL 267 (718)
Q Consensus 207 ~~~~~~~~~TL~~m~~gGi~D~v~GGF~RYsvD~~W~vPHFEKmL-------------------yDnA~ll~~ya~Ay~~ 267 (718)
+++++.+.--++-|.+ +++. .|+|| +.|...|.-+.-+..+ --|++++.+++.|+++
T Consensus 190 ~~lldE~rWg~D~llk--m~~~-~g~~y-~qVgd~W~~d~~~R~~~~~~~~~~~~~~~y~~~~~~~agl~aAALA~Asrv 265 (586)
T 3h7l_A 190 TRLIEEALFGADFLVR--MQNE-KGFFY-MTVFDKWSKDTAQREICAYETQLGHKFDDYQAGFRQGGGVAIAALAAASRL 265 (586)
T ss_dssp HHHHHHHHHHHHHHHH--TBCT-TSCBB-CEEECTTCCCGGGCEEEEEETTTTEEESCCBCCGGGTHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHh--cccC-CCeEE-EEecCCCCCCCCccccccccCCCCCCCcceecCCCCcHHHHHHHHHHHhcc
Confidence 5889999999999988 7765 56777 5665557532111100 1389999999999999
Q ss_pred -----cCChHHHHHHHHHHHHHHHhccCCCCceeeeccCCcccccCcccccCCceEeechHHHHHHhchhHHHHHHHhcc
Q 005023 268 -----TKDVFYSYICRDILDYLRRDMIGPGGEIFSAEDADSAETEGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYL 342 (718)
Q Consensus 268 -----t~~~~y~~~A~~~~~~l~~~m~~p~Ggf~sa~DADs~~~~~~~~~~EG~yY~Wt~~Ei~~~L~~~~~~~~~~~~v 342 (718)
.+.+.|++.|+++.+|+.+++. .|+. |.++
T Consensus 266 f~d~~~~a~~~L~aA~~a~~fa~~~~~----~y~~--~g~~--------------------------------------- 300 (586)
T 3h7l_A 266 GVHGEYDQQKYRNAAENGYWHLKEHNT----QYLN--DGEE--------------------------------------- 300 (586)
T ss_dssp SSCSSSCHHHHHHHHHHHHHHHHHHHH----HHST--TSCC---------------------------------------
T ss_pred cCCCCcChHHHHHHHHHHHHHHHhcCc----cccC--CCCc---------------------------------------
Confidence 5557889999999999998752 1210 0000
Q ss_pred cCCCCcCCCCCCCCCCccCCcceeeccCCchHHHHhcCCCHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhchHHHHH
Q 005023 343 KPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLVI 422 (718)
Q Consensus 343 ~~~Gn~~~~~~~dp~~~~eg~nvL~~~~~~~~~a~~~g~~~~~~~~~l~~~r~~L~~~R~~R~~P~~Ddkilt~WNgl~I 422 (718)
| +.||. .++
T Consensus 301 ---~-------------------------------------------------------------~~De~-------~~~ 309 (586)
T 3h7l_A 301 ---N-------------------------------------------------------------IIDEY-------CAL 309 (586)
T ss_dssp ---C-------------------------------------------------------------HHHHH-------HHH
T ss_pred ---c-------------------------------------------------------------chhHH-------HHH
Confidence 0 11222 479
Q ss_pred HHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEeecCCCCCCCCCcccHHHHHHHHH
Q 005023 423 SSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPSKAPGFLDDYAFLISGLL 502 (718)
Q Consensus 423 ~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~~g~~~~~~~l~DyA~li~all 502 (718)
+|.++.++++++ +.||+.|+..++.+.+++++.+.++++++..++.....-.....+..+.+|+
T Consensus 310 WAA~eLy~ATgd----------------~~YL~~a~~~a~~l~~~~~~~~~~g~~w~~~d~~~r~~~d~a~~gl~~iaLl 373 (586)
T 3h7l_A 310 LASVELFKATKE----------------TRYLEESRLWAQRLVARQMSDEQIQHFWSANQDGSRPYFHAAEAGLPTIALC 373 (586)
T ss_dssp HHHHHHHHHHCC----------------HHHHHHHHHHHHHHHTTEECCSSCSSEEBSSSSSSSBCCCTTTTTHHHHHHH
T ss_pred HHHHHHHHHhCC----------------HHHHHHHHHHHHHHHHhccCCccCCCcCCCcccCCcccccccccHHHHHHHH
Confidence 999999999998 8999999999999999998766677777643432211111113466788999
Q ss_pred HHHHHcCChHHHHHHHHHHHHHHH
Q 005023 503 DLYEFGSGTKWLVWAIELQNTQDE 526 (718)
Q Consensus 503 ~LYeaTgd~~~L~~A~~L~~~~~~ 526 (718)
.+..++++..+.+.|+++.....+
T Consensus 374 ~l~~~~~d~~~~~~a~~~i~~~~d 397 (586)
T 3h7l_A 374 EYLAIEDDSVQTESVKCIVNRACE 397 (586)
T ss_dssp HHHHHCCSTTTTHHHHHHHHHHHH
T ss_pred HhhhhcCChHHHHHHHHHHHHHhh
Confidence 999999999888888887776655
No 55
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=98.36 E-value=6.3e-07 Score=80.50 Aligned_cols=74 Identities=18% Similarity=0.270 Sum_probs=56.5
Q ss_pred hHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEE
Q 005023 4 RSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSV 80 (718)
Q Consensus 4 ~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~v 80 (718)
+.+..|++++|++++ .+||++|+.|.. .|+ ++++.+.. +..++||.++.+++.+. +|+.|+|+.+
T Consensus 25 ~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~-~l~--~~~~~~~~-~~~~~vd~~~~~~~~~~--------~~v~~~Pt~~ 92 (122)
T 2vlu_A 25 MQIEEANTAKKLVVIDFTASWCGPCRIMAP-VFA--DLAKKFPN-AVFLKVDVDELKPIAEQ--------FSVEAMPTFL 92 (122)
T ss_dssp HHHHHHHHTTCCEEEEEECTTCHHHHHHHH-HHH--HHHHHCTT-SEEEEEETTTCHHHHHH--------TTCCSSSEEE
T ss_pred HHHHHhhccCCEEEEEEECCCCHHHHHHHH-HHH--HHHHHCCC-cEEEEEECCCCHHHHHH--------cCCCcccEEE
Confidence 456666778999866 389999999986 343 45555544 88999999998776554 6889999987
Q ss_pred EeCCCCceee
Q 005023 81 FLSPDLKPLM 90 (718)
Q Consensus 81 fl~p~g~p~~ 90 (718)
|+ ++|+++.
T Consensus 93 ~~-~~G~~~~ 101 (122)
T 2vlu_A 93 FM-KEGDVKD 101 (122)
T ss_dssp EE-ETTEEEE
T ss_pred EE-eCCEEEE
Confidence 77 8999874
No 56
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.35 E-value=1.1e-06 Score=79.84 Aligned_cols=68 Identities=16% Similarity=0.263 Sum_probs=55.7
Q ss_pred hhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCC
Q 005023 9 GTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPD 85 (718)
Q Consensus 9 Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~ 85 (718)
..+++|++++ .+||++|+.|.... .++++.+..++..++||.++.+++.+. +++.|+|+++|++++
T Consensus 31 ~~~~~~~~lv~f~a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~vd~~~~~~l~~~--------~~v~~~Pt~~~~~~~ 99 (130)
T 2dml_A 31 VIQSDGLWLVEFYAPWCGHCQRLTPEW---KKAATALKDVVKVGAVNADKHQSLGGQ--------YGVQGFPTIKIFGAN 99 (130)
T ss_dssp TTTCSSCEEEEEECTTCSTTGGGHHHH---HHHHHHTTTTSEEEEEETTTCHHHHHH--------HTCCSSSEEEEESSC
T ss_pred HhcCCCeEEEEEECCCCHHHHhhCHHH---HHHHHHhcCceEEEEEeCCCCHHHHHH--------cCCCccCEEEEEeCC
Confidence 4467888865 38999999998754 678888877789999999998776554 578899999999998
Q ss_pred Cc
Q 005023 86 LK 87 (718)
Q Consensus 86 g~ 87 (718)
|+
T Consensus 100 ~~ 101 (130)
T 2dml_A 100 KN 101 (130)
T ss_dssp TT
T ss_pred CC
Confidence 87
No 57
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=98.34 E-value=6.8e-07 Score=79.40 Aligned_cols=75 Identities=24% Similarity=0.339 Sum_probs=56.5
Q ss_pred hhHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcE
Q 005023 3 RRSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLS 79 (718)
Q Consensus 3 ~~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~ 79 (718)
+++++.|++++|++++ .+||++|+.|... | .++++... ++..++||.++.+++.+. +|..|+|+.
T Consensus 18 ~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~-l--~~~~~~~~-~~~~~~v~~~~~~~~~~~--------~~v~~~Pt~ 85 (118)
T 2vm1_A 18 DTHMANGKDTGKLVIIDFTASWCGPCRVIAPV-F--AEYAKKFP-GAIFLKVDVDELKDVAEA--------YNVEAMPTF 85 (118)
T ss_dssp HHHHHHHHHHTCCEEEEEECTTCHHHHHHHHH-H--HHHHHHCT-TSEEEEEETTTSHHHHHH--------TTCCSBSEE
T ss_pred HHHHHhcccCCCEEEEEEECCCCHhHHHHhHH-H--HHHHHHCC-CcEEEEEEcccCHHHHHH--------cCCCcCcEE
Confidence 3567777778999865 3899999999853 2 33444433 688999999988766554 678899998
Q ss_pred EEeCCCCceee
Q 005023 80 VFLSPDLKPLM 90 (718)
Q Consensus 80 vfl~p~g~p~~ 90 (718)
+|+ ++|+++.
T Consensus 86 ~~~-~~g~~~~ 95 (118)
T 2vm1_A 86 LFI-KDGEKVD 95 (118)
T ss_dssp EEE-ETTEEEE
T ss_pred EEE-eCCeEEE
Confidence 888 7999874
No 58
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.34 E-value=8.4e-07 Score=81.69 Aligned_cols=74 Identities=20% Similarity=0.276 Sum_probs=57.2
Q ss_pred hHHhhhhhcCCcEEEE---cCCchhhhhhccccCcHHHHHHhhcc---cEEEEecCCCCcchHHHHHHHHHHhcCCCCCC
Q 005023 4 RSFCGGTKTRRTHFLI---NTCHWCHVMEVESFEDEGVAKLLNDW---FVSIKVDREERPDVDKVYMTYVQALYGGGGWP 77 (718)
Q Consensus 4 ~a~~~Ak~e~K~ii~y---~~C~wChvM~~esf~d~~va~~ln~~---Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP 77 (718)
+.++++.+++|++|++ +||.+|+.|.... .++++.+... ++.++||.++.+++.+. +|+.|+|
T Consensus 25 ~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~--------~~v~~~P 93 (140)
T 2dj1_A 25 GNFDNFVADKDTVLLEFYAPWCGHCKQFAPEY---EKIASTLKDNDPPIAVAKIDATSASMLASK--------FDVSGYP 93 (140)
T ss_dssp TTHHHHHTTCSEEEEEECCTTCHHHHTTHHHH---HHHHHHHHSSSSCCEEEEECTTTCHHHHHH--------TTCCSSS
T ss_pred HhHHHHHhcCCeEEEEEECCCCHHHHHhhHHH---HHHHHHHhccCCceEEEEEeCcccHHHHHH--------CCCCccC
Confidence 4566777788998763 8999999998643 3566666654 99999999998666554 6788999
Q ss_pred cEEEeCCCCcee
Q 005023 78 LSVFLSPDLKPL 89 (718)
Q Consensus 78 ~~vfl~p~g~p~ 89 (718)
+++|+ .+|++.
T Consensus 94 t~~~~-~~G~~~ 104 (140)
T 2dj1_A 94 TIKIL-KKGQAV 104 (140)
T ss_dssp EEEEE-ETTEEE
T ss_pred eEEEE-ECCcEE
Confidence 99999 789843
No 59
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=98.32 E-value=6.7e-07 Score=79.65 Aligned_cols=67 Identities=18% Similarity=0.233 Sum_probs=53.0
Q ss_pred hcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCc
Q 005023 11 KTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLK 87 (718)
Q Consensus 11 ~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~ 87 (718)
..+|++++ .+||+.|+.|.... .++++.. .+.+.++||.++.|++.+. +|+.|+||.+|+ .+|+
T Consensus 18 ~~~k~vvv~F~a~wC~~C~~~~p~~---~~~~~~~-~~~~~~~vd~d~~~~l~~~--------~~V~~~PT~~~~-~~G~ 84 (105)
T 3zzx_A 18 AGNKLVVIDFYATWCGPCKMIAPKL---EELSQSM-SDVVFLKVDVDECEDIAQD--------NQIACMPTFLFM-KNGQ 84 (105)
T ss_dssp TTTSEEEEEEECTTCHHHHHHHHHH---HHHHHHC-TTEEEEEEETTTCHHHHHH--------TTCCBSSEEEEE-ETTE
T ss_pred cCCCEEEEEEECCCCCCccCCCcch---hhhhhcc-CCeEEEEEecccCHHHHHH--------cCCCeecEEEEE-ECCE
Confidence 34788876 49999999998643 3466554 4588999999999988765 688999998887 6999
Q ss_pred eee
Q 005023 88 PLM 90 (718)
Q Consensus 88 p~~ 90 (718)
++.
T Consensus 85 ~v~ 87 (105)
T 3zzx_A 85 KLD 87 (105)
T ss_dssp EEE
T ss_pred EEE
Confidence 985
No 60
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=98.32 E-value=1.2e-06 Score=77.33 Aligned_cols=69 Identities=19% Similarity=0.251 Sum_probs=56.0
Q ss_pred hhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCC
Q 005023 10 TKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDL 86 (718)
Q Consensus 10 k~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g 86 (718)
.+.+|++++ .+||++|+.|... | .++++.+..++..++||.++.+++.+. +|..++|+.+|+ ++|
T Consensus 22 ~~~~~~~lv~f~~~~C~~C~~~~~~-l--~~~~~~~~~~v~~~~v~~~~~~~~~~~--------~~v~~~Pt~~~~-~~G 89 (115)
T 1thx_A 22 LKAEQPVLVYFWASWCGPCQLMSPL-I--NLAANTYSDRLKVVKLEIDPNPTTVKK--------YKVEGVPALRLV-KGE 89 (115)
T ss_dssp TTCSSCEEEEEECTTCTTHHHHHHH-H--HHHHHHTTTTCEEEEEESTTCHHHHHH--------TTCCSSSEEEEE-ETT
T ss_pred hcCCceEEEEEECCCCHHHHHhHHH-H--HHHHHHhCCcEEEEEEEcCCCHHHHHH--------cCCCceeEEEEE-cCC
Confidence 467888865 3899999999864 3 577777776799999999998766544 688999999999 899
Q ss_pred ceee
Q 005023 87 KPLM 90 (718)
Q Consensus 87 ~p~~ 90 (718)
+++.
T Consensus 90 ~~~~ 93 (115)
T 1thx_A 90 QILD 93 (115)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9875
No 61
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=98.32 E-value=7.5e-07 Score=81.69 Aligned_cols=71 Identities=13% Similarity=0.172 Sum_probs=57.7
Q ss_pred hhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCC
Q 005023 8 GGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSP 84 (718)
Q Consensus 8 ~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p 84 (718)
...+.+|++++ .+||.+|+.|.... .++++.++.++..++||.++.+++.+. +|+.|+|+.+|+ +
T Consensus 35 ~~~~~~k~vlv~F~a~wC~~C~~~~p~l---~~l~~~~~~~v~~~~vd~~~~~~l~~~--------~~v~~~Pt~~~~-~ 102 (128)
T 2o8v_B 35 DVLKADGAILVDFWAEWCGPAKMIAPIL---DEIADEYQGKLTVAKLNIDQNPGTAPK--------YGIRGIPTLLLF-K 102 (128)
T ss_dssp HTTTCSSEEEEEEECSSCHHHHHTHHHH---HHHHHHTTTTEEEEEEETTTCCTTSGG--------GTCCSSSEEEEE-E
T ss_pred HHHhcCCEEEEEEECCCCHHHHHHhHHH---HHHHHHhcCCeEEEEEECCCCHHHHHH--------cCCCccCEEEEE-e
Confidence 34567888865 38999999998643 567777777799999999999887665 678999999999 8
Q ss_pred CCceee
Q 005023 85 DLKPLM 90 (718)
Q Consensus 85 ~g~p~~ 90 (718)
+|+++.
T Consensus 103 ~G~~~~ 108 (128)
T 2o8v_B 103 NGEVAA 108 (128)
T ss_dssp TTEEEE
T ss_pred CCEEEE
Confidence 999875
No 62
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=98.31 E-value=9.3e-07 Score=76.15 Aligned_cols=75 Identities=20% Similarity=0.313 Sum_probs=57.9
Q ss_pred hhHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcE
Q 005023 3 RRSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLS 79 (718)
Q Consensus 3 ~~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~ 79 (718)
.+.++++.+++|+++. .+||++|+.|... | .++++.+.. +..++||.++.+++.+. +|..|+|+.
T Consensus 6 ~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~-~--~~~~~~~~~-~~~~~v~~~~~~~~~~~--------~~v~~~Pt~ 73 (104)
T 2e0q_A 6 SKNFDSFLASHEIAVVDFWAEWCAPCLILAPI-I--EELAEDYPQ-VGFGKLNSDENPDIAAR--------YGVMSLPTV 73 (104)
T ss_dssp TTTHHHHHHHSSEEEEEEECTTCHHHHHHHHH-H--HHHHHHCTT-SEEEEEETTTCHHHHHH--------TTCCSSCEE
T ss_pred HHHHHHHHhcCCcEEEEEECCCChhHHHHhHH-H--HHHHHHcCC-ceEEEEECCCCHHHHHh--------CCccccCEE
Confidence 3456677778898865 3899999999853 3 346666655 88999999998766554 678899999
Q ss_pred EEeCCCCceee
Q 005023 80 VFLSPDLKPLM 90 (718)
Q Consensus 80 vfl~p~g~p~~ 90 (718)
+|+ ++|+++.
T Consensus 74 ~~~-~~g~~~~ 83 (104)
T 2e0q_A 74 IFF-KDGEPVD 83 (104)
T ss_dssp EEE-ETTEEEE
T ss_pred EEE-ECCeEhh
Confidence 999 8999875
No 63
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=98.30 E-value=9.2e-07 Score=79.39 Aligned_cols=75 Identities=11% Similarity=0.123 Sum_probs=55.4
Q ss_pred hHHhhhhh--cCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCc
Q 005023 4 RSFCGGTK--TRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPL 78 (718)
Q Consensus 4 ~a~~~Ak~--e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~ 78 (718)
+.++++.+ ++|++++ .+||.+|+.|.... .++++.+.. +..++||.++.+++.+. +|+.|+|+
T Consensus 20 ~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l---~~l~~~~~~-v~~~~vd~d~~~~l~~~--------~~v~~~Pt 87 (116)
T 3qfa_C 20 TAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFF---HSLSEKYSN-VIFLEVDVDDCQDVASE--------CEVKSMPT 87 (116)
T ss_dssp HHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHH---HHHHTTCTT-SEEEEEETTTTHHHHHH--------TTCCSSSE
T ss_pred HHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHH---HHHHHHCCC-CEEEEEECCCCHHHHHH--------cCCccccE
Confidence 44555555 7888866 38999999998532 234444433 88999999998877655 68899999
Q ss_pred EEEeCCCCceeec
Q 005023 79 SVFLSPDLKPLMG 91 (718)
Q Consensus 79 ~vfl~p~g~p~~~ 91 (718)
.+|+ .+|+++..
T Consensus 88 ~~~~-~~G~~~~~ 99 (116)
T 3qfa_C 88 FQFF-KKGQKVGE 99 (116)
T ss_dssp EEEE-SSSSEEEE
T ss_pred EEEE-eCCeEEEE
Confidence 9998 79998753
No 64
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=98.30 E-value=7.4e-07 Score=77.46 Aligned_cols=74 Identities=18% Similarity=0.249 Sum_probs=58.9
Q ss_pred hHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEE
Q 005023 4 RSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSV 80 (718)
Q Consensus 4 ~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~v 80 (718)
+.++.+. ++|++++ .+||++|+.|.... .++++.++..+..++||.++.|++.+. +|..|+|+.+
T Consensus 11 ~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~--------~~v~~~Pt~~ 78 (106)
T 3die_A 11 ADFDSKV-ESGVQLVDFWATACGPCKMIAPVL---EELAADYEGKADILKLDVDENPSTAAK--------YEVMSIPTLI 78 (106)
T ss_dssp TTHHHHS-CSSEEEEEEECSBCHHHHHHHHHH---HHHHHHTTTTCEEEEEETTTCHHHHHH--------TTCCSBSEEE
T ss_pred HHHHHHh-cCCcEEEEEECCCCHHHHHHhHHH---HHHHHHhcCCcEEEEEECCcCHHHHHh--------CCCcccCEEE
Confidence 3455555 7888865 48999999998654 677778877789999999998876654 6889999999
Q ss_pred EeCCCCceee
Q 005023 81 FLSPDLKPLM 90 (718)
Q Consensus 81 fl~p~g~p~~ 90 (718)
|+. +|+++.
T Consensus 79 ~~~-~G~~~~ 87 (106)
T 3die_A 79 VFK-DGQPVD 87 (106)
T ss_dssp EEE-TTEEEE
T ss_pred EEe-CCeEEE
Confidence 995 999875
No 65
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=98.29 E-value=7.5e-07 Score=80.69 Aligned_cols=75 Identities=20% Similarity=0.251 Sum_probs=56.5
Q ss_pred hhHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcE
Q 005023 3 RRSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLS 79 (718)
Q Consensus 3 ~~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~ 79 (718)
++.++.+++++|++|+ .+||++|+.|... | .++++.+. ++..++||.++.+++.+. +|+.++|+.
T Consensus 26 ~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~-l--~~~~~~~~-~v~~~~v~~~~~~~~~~~--------~~v~~~Pt~ 93 (130)
T 1wmj_A 26 DAQMTKAKEAGKVVIIDFTASWCGPCRFIAPV-F--AEYAKKFP-GAVFLKVDVDELKEVAEK--------YNVEAMPTF 93 (130)
T ss_dssp HHHHHHHHTTTCBCBEECCSSSCSCSSSSHHH-H--HHHHHHCT-TBCCEECCTTTSGGGHHH--------HTCCSSCCC
T ss_pred HHHHHHHhhcCCEEEEEEECCCChhHHHHHHH-H--HHHHHHCC-CCEEEEEeccchHHHHHH--------cCCCccceE
Confidence 3567777778999866 3899999999853 2 23444443 588889999998887665 578899998
Q ss_pred EEeCCCCceee
Q 005023 80 VFLSPDLKPLM 90 (718)
Q Consensus 80 vfl~p~g~p~~ 90 (718)
+|+ ++|+++.
T Consensus 94 ~~~-~~g~~~~ 103 (130)
T 1wmj_A 94 LFI-KDGAEAD 103 (130)
T ss_dssp CBC-TTTTCCB
T ss_pred EEE-eCCeEEE
Confidence 877 8999874
No 66
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=98.28 E-value=1e-06 Score=81.28 Aligned_cols=74 Identities=11% Similarity=0.135 Sum_probs=57.0
Q ss_pred hHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEE
Q 005023 4 RSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSV 80 (718)
Q Consensus 4 ~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~v 80 (718)
+++..++.++|++++ .+||++|+.|... | .++++.. .++..++||.++.+++.+. +|+.|+|+.+
T Consensus 37 ~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~-l--~~l~~~~-~~v~~~~v~~~~~~~~~~~--------~~v~~~Pt~~ 104 (139)
T 3d22_A 37 QKLSEASRDGKIVLANFSARWCGPSRQIAPY-Y--IELSENY-PSLMFLVIDVDELSDFSAS--------WEIKATPTFF 104 (139)
T ss_dssp HHHHHHHHHTCCEEEEEECTTCHHHHHHHHH-H--HHHHHHC-TTSEEEEEETTTSHHHHHH--------TTCCEESEEE
T ss_pred HHHHHHhhcCCEEEEEEECCCCHHHHHHHHH-H--HHHHHHC-CCCEEEEEeCcccHHHHHH--------cCCCcccEEE
Confidence 456677778999865 3899999999854 2 3444444 3688999999998776554 6889999998
Q ss_pred EeCCCCceee
Q 005023 81 FLSPDLKPLM 90 (718)
Q Consensus 81 fl~p~g~p~~ 90 (718)
|+ ++|+++.
T Consensus 105 ~~-~~G~~~~ 113 (139)
T 3d22_A 105 FL-RDGQQVD 113 (139)
T ss_dssp EE-ETTEEEE
T ss_pred EE-cCCeEEE
Confidence 88 8999885
No 67
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=98.27 E-value=2.2e-06 Score=79.60 Aligned_cols=71 Identities=21% Similarity=0.281 Sum_probs=58.7
Q ss_pred hhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCC
Q 005023 8 GGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSP 84 (718)
Q Consensus 8 ~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p 84 (718)
...+++|++++ .+||.+|+.|.... .++++.+..++..++||.++.+++.+. +|+.|+|+.+|+ .
T Consensus 19 ~~~~~~~~vlv~F~a~wC~~C~~~~~~l---~~l~~~~~~~v~~~~vd~~~~~~l~~~--------~~v~~~Pt~~~~-~ 86 (140)
T 3hz4_A 19 QVEDSKKPVVVMFYSPACPYCKAMEPYF---EEYAKEYGSSAVFGRINIATNPWTAEK--------YGVQGTPTFKFF-C 86 (140)
T ss_dssp HTTTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTSEEEEEETTTCHHHHHH--------HTCCEESEEEEE-E
T ss_pred HHHhCCCcEEEEEECCCChhHHHHHHHH---HHHHHHhCCceEEEEEECCcCHhHHHH--------CCCCcCCEEEEE-e
Confidence 66677899866 38999999999754 778888888899999999998877654 578999988888 7
Q ss_pred CCceee
Q 005023 85 DLKPLM 90 (718)
Q Consensus 85 ~g~p~~ 90 (718)
+|+++.
T Consensus 87 ~G~~~~ 92 (140)
T 3hz4_A 87 HGRPVW 92 (140)
T ss_dssp TTEEEE
T ss_pred CCcEEE
Confidence 999874
No 68
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=98.27 E-value=1.4e-06 Score=81.29 Aligned_cols=75 Identities=12% Similarity=0.064 Sum_probs=60.6
Q ss_pred hHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEE
Q 005023 4 RSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSV 80 (718)
Q Consensus 4 ~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~v 80 (718)
+.++.+.+++|++++ .+||.+|+.|.... .++++.++.++..++||.++.+++.+. +|+.|+|+.+
T Consensus 46 ~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l---~~~~~~~~~~~~~~~vd~~~~~~l~~~--------~~v~~~Pt~~ 114 (148)
T 3p2a_A 46 ETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIF---AETAAERAGKVRFVKVNTEAEPALSTR--------FRIRSIPTIM 114 (148)
T ss_dssp TTHHHHTTCSSCEEEEEECSSCHHHHHHHHHH---HHHHHHTTTTCEEEEEETTTCHHHHHH--------TTCCSSSEEE
T ss_pred HHHHHHHhcCCcEEEEEECCCCHHHHHHHHHH---HHHHHHcCCceEEEEEECcCCHHHHHH--------CCCCccCEEE
Confidence 456667788999876 38999999998543 567777777899999999999877655 6889999999
Q ss_pred EeCCCCceee
Q 005023 81 FLSPDLKPLM 90 (718)
Q Consensus 81 fl~p~g~p~~ 90 (718)
|+ .+|+.+.
T Consensus 115 ~~-~~G~~~~ 123 (148)
T 3p2a_A 115 LY-RNGKMID 123 (148)
T ss_dssp EE-ETTEEEE
T ss_pred EE-ECCeEEE
Confidence 88 5999875
No 69
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=98.27 E-value=1.5e-06 Score=76.84 Aligned_cols=68 Identities=13% Similarity=0.229 Sum_probs=49.8
Q ss_pred hcCCcEEE---EcCCchhhhhhccccCcHHHHHHh-hcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCC
Q 005023 11 KTRRTHFL---INTCHWCHVMEVESFEDEGVAKLL-NDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDL 86 (718)
Q Consensus 11 ~e~K~ii~---y~~C~wChvM~~esf~d~~va~~l-n~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g 86 (718)
+.+|++++ .+||++|+.|... | .++++.+ +.++..++||.++.+++.+. +|+.|+|+.+|+ .+|
T Consensus 19 ~~~~~~~v~f~a~wC~~C~~~~~~-~--~~~~~~~~~~~~~~~~vd~~~~~~~~~~--------~~v~~~Pt~~~~-~~G 86 (112)
T 3d6i_A 19 AGDKLIVLYFHTSWAEPCKALKQV-F--EAISNEPSNSNVSFLSIDADENSEISEL--------FEISAVPYFIII-HKG 86 (112)
T ss_dssp TTTCCEEEEEECCC--CHHHHHHH-H--HHHHHCGGGTTSEEEEEETTTCHHHHHH--------TTCCSSSEEEEE-ETT
T ss_pred cCCCEEEEEEECCCCHHHHHHHHH-H--HHHHHhcCCCCEEEEEEecccCHHHHHH--------cCCCcccEEEEE-ECC
Confidence 34888865 4899999999853 2 3444443 45699999999998766554 688999999988 699
Q ss_pred ceee
Q 005023 87 KPLM 90 (718)
Q Consensus 87 ~p~~ 90 (718)
+++.
T Consensus 87 ~~~~ 90 (112)
T 3d6i_A 87 TILK 90 (112)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9885
No 70
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=98.26 E-value=3.5e-07 Score=80.30 Aligned_cols=80 Identities=13% Similarity=0.219 Sum_probs=51.8
Q ss_pred hHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEE
Q 005023 4 RSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSV 80 (718)
Q Consensus 4 ~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~v 80 (718)
+.++++.+++|++++ .+||+.|+.|.... .++++.+ .++..++||.++.|++.+. +|+.|+|+.+
T Consensus 9 ~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~---~~~~~~~-~~~~~~~vd~~~~~~l~~~--------~~v~~~Pt~~ 76 (105)
T 4euy_A 9 EELATYIEEQQLVLLFIKTENCGVCDVMLRKV---NYVLENY-NYVEKIEILLQDMQEIAGR--------YAVFTGPTVL 76 (105)
T ss_dssp -CCSSSTTCSSEEEEEEEESSCHHHHHHHHHH---HHHHHTC-TTEEEEEEEECCC-----------------CCCCEEE
T ss_pred HHHHHHHhcCCCEEEEEeCCCCcchHHHHHHH---HHHHHHc-CCceEEEEECCCCHHHHHh--------cCCCCCCEEE
Confidence 345566678999876 49999999998532 3444444 3689999999999987665 4678999999
Q ss_pred EeCCCCceeec-ccccC
Q 005023 81 FLSPDLKPLMG-GTYFP 96 (718)
Q Consensus 81 fl~p~g~p~~~-~~y~p 96 (718)
|+. +|+++.. .++.+
T Consensus 77 ~~~-~G~~~~~~~g~~~ 92 (105)
T 4euy_A 77 LFY-NGKEILRESRFIS 92 (105)
T ss_dssp EEE-TTEEEEEEESSCC
T ss_pred EEe-CCeEEEEEeCCcC
Confidence 995 9998753 34444
No 71
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=98.26 E-value=1e-06 Score=79.16 Aligned_cols=71 Identities=17% Similarity=0.183 Sum_probs=57.3
Q ss_pred hhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeC
Q 005023 7 CGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLS 83 (718)
Q Consensus 7 ~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~ 83 (718)
+...+++|++++ .+||++|+.|... | .++++.+..++..++||.++.+++.+. +|+.|+|+.+|++
T Consensus 15 ~~~~~~~~~~lv~f~a~~C~~C~~~~~~-~--~~~~~~~~~~~~~~~vd~~~~~~~~~~--------~~v~~~Pt~~~~~ 83 (122)
T 3aps_A 15 EKVLQGKTHWVVDFYAPWCGPCQNFAPE-F--ELLARMIKGKVRAGKVDCQAYPQTCQK--------AGIKAYPSVKLYQ 83 (122)
T ss_dssp HHTTTCSSCEEEEEECTTCHHHHHHHHH-H--HHHHHHHTTTCEEEEEETTTCHHHHHH--------TTCCSSSEEEEEE
T ss_pred HHHhcCCCeEEEEEECCCCHHHHHHHHH-H--HHHHHHhcCCeEEEEEeCcCCHHHHHH--------cCCCccceEEEEe
Confidence 456677888866 3899999999964 3 567888877899999999998766554 6889999999998
Q ss_pred CCCce
Q 005023 84 PDLKP 88 (718)
Q Consensus 84 p~g~p 88 (718)
+.|+.
T Consensus 84 ~~~~~ 88 (122)
T 3aps_A 84 YERAK 88 (122)
T ss_dssp EEGGG
T ss_pred CCCcc
Confidence 88774
No 72
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=98.25 E-value=1.6e-06 Score=75.25 Aligned_cols=74 Identities=12% Similarity=0.147 Sum_probs=55.7
Q ss_pred hHHhhhhh--cCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCc
Q 005023 4 RSFCGGTK--TRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPL 78 (718)
Q Consensus 4 ~a~~~Ak~--e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~ 78 (718)
+.++++.+ ++|++++ .+||+.|+.|.... .++++... ++..++||.++.|++.+. +|..|+|+
T Consensus 9 ~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~---~~~~~~~~-~~~~~~vd~~~~~~~~~~--------~~v~~~Pt 76 (105)
T 3m9j_A 9 TAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFF---HSLSEKYS-NVIFLEVDVDDCQDVASE--------SEVKSMPT 76 (105)
T ss_dssp HHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHH---HHHHHHST-TSEEEEEETTTCHHHHHH--------TTCCBSSE
T ss_pred HHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHH---HHHHHHcc-CeEEEEEEhhhhHHHHHH--------cCCCcCcE
Confidence 34455555 6888865 49999999998643 34555554 488999999998876654 68899999
Q ss_pred EEEeCCCCceee
Q 005023 79 SVFLSPDLKPLM 90 (718)
Q Consensus 79 ~vfl~p~g~p~~ 90 (718)
.+|+ .+|+.+.
T Consensus 77 ~~~~-~~g~~~~ 87 (105)
T 3m9j_A 77 FQFF-KKGQKVG 87 (105)
T ss_dssp EEEE-ETTEEEE
T ss_pred EEEE-ECCeEEE
Confidence 9999 7899875
No 73
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=98.23 E-value=2.2e-06 Score=81.46 Aligned_cols=75 Identities=17% Similarity=0.226 Sum_probs=60.4
Q ss_pred hHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEE
Q 005023 4 RSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSV 80 (718)
Q Consensus 4 ~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~v 80 (718)
+.++...+.+|++++ .+||++|+.|... | .++++.+..++..++||.++.|++.+. +|+.++|+.+
T Consensus 55 ~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~-l--~~la~~~~~~v~~~~vd~~~~~~l~~~--------~~i~~~Pt~~ 123 (155)
T 2ppt_A 55 AILARAERDDLPLLVDFWAPWCGPCRQMAPQ-F--QAAAATLAGQVRLAKIDTQAHPAVAGR--------HRIQGIPAFI 123 (155)
T ss_dssp HHHHHHTTCSSCEEEEEECTTCHHHHHHHHH-H--HHHHHHHTTTCEEEEEETTTSTHHHHH--------TTCCSSSEEE
T ss_pred HHHHHHHhCCCcEEEEEECCCCHHHHHHHHH-H--HHHHHHccCCEEEEEEeCCccHHHHHH--------cCCCcCCEEE
Confidence 445555567888866 3899999999864 4 478888877799999999999877655 6889999999
Q ss_pred EeCCCCceee
Q 005023 81 FLSPDLKPLM 90 (718)
Q Consensus 81 fl~p~g~p~~ 90 (718)
|+ ++|+++.
T Consensus 124 ~~-~~G~~~~ 132 (155)
T 2ppt_A 124 LF-HKGRELA 132 (155)
T ss_dssp EE-ETTEEEE
T ss_pred EE-eCCeEEE
Confidence 98 7999874
No 74
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=98.22 E-value=8.1e-07 Score=79.43 Aligned_cols=72 Identities=14% Similarity=0.243 Sum_probs=57.3
Q ss_pred hhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeC
Q 005023 7 CGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLS 83 (718)
Q Consensus 7 ~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~ 83 (718)
+...+++|++++ .+||++|+.|... | .++++.++.++..++||.++.+++.+. +|..|+|+.+|+
T Consensus 24 ~~~~~~~~~~lv~f~~~~C~~C~~~~~~-~--~~~~~~~~~~~~~~~v~~~~~~~~~~~--------~~i~~~Pt~~~~- 91 (121)
T 2i1u_A 24 TDVLSSNKPVLVDFWATWCGPCKMVAPV-L--EEIATERATDLTVAKLDVDTNPETARN--------FQVVSIPTLILF- 91 (121)
T ss_dssp HHTTTCSSCEEEEEECTTCHHHHHHHHH-H--HHHHHHTTTTCEEEEEETTTCHHHHHH--------TTCCSSSEEEEE-
T ss_pred HHHHhCCCcEEEEEECCCCHHHHHHHHH-H--HHHHHHhcCCeEEEEEECCCCHHHHHh--------cCCCcCCEEEEE-
Confidence 445677888865 3899999999975 3 577777877799999999998776554 688999999888
Q ss_pred CCCceee
Q 005023 84 PDLKPLM 90 (718)
Q Consensus 84 p~g~p~~ 90 (718)
++|+++.
T Consensus 92 ~~g~~~~ 98 (121)
T 2i1u_A 92 KDGQPVK 98 (121)
T ss_dssp ETTEEEE
T ss_pred ECCEEEE
Confidence 5999875
No 75
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.22 E-value=2.4e-06 Score=77.62 Aligned_cols=69 Identities=16% Similarity=0.173 Sum_probs=55.1
Q ss_pred hhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhh----cccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEE
Q 005023 9 GTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLN----DWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVF 81 (718)
Q Consensus 9 Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln----~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vf 81 (718)
..+.+|++++ .+||++|+.|.... .++++.++ .++..++||.++.+++.+. +++.|+|+++|
T Consensus 21 ~~~~~~~~lv~f~a~wC~~C~~~~~~~---~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~--------~~v~~~Pt~~~ 89 (133)
T 1x5d_A 21 VLDSEDVWMVEFYAPWCGHCKNLEPEW---AAAASEVKEQTKGKVKLAAVDATVNQVLASR--------YGIRGFPTIKI 89 (133)
T ss_dssp TTTSSSEEEEEEECTTCHHHHTHHHHH---HHHHHHHHHHTTTSEEEEEEETTTCCHHHHH--------HTCCSSSEEEE
T ss_pred HhcCCCeEEEEEECCCCHHHHhhcHHH---HHHHHHHHhhcCCcEEEEEEECCCCHHHHHh--------CCCCeeCeEEE
Confidence 3466888865 38999999999654 46777776 6799999999998877665 57889999999
Q ss_pred eCCCCcee
Q 005023 82 LSPDLKPL 89 (718)
Q Consensus 82 l~p~g~p~ 89 (718)
+++ |+.+
T Consensus 90 ~~~-g~~~ 96 (133)
T 1x5d_A 90 FQK-GESP 96 (133)
T ss_dssp EET-TEEE
T ss_pred EeC-CCce
Confidence 987 7755
No 76
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=98.22 E-value=1.3e-06 Score=78.72 Aligned_cols=75 Identities=17% Similarity=0.221 Sum_probs=57.6
Q ss_pred HHh-hhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEE
Q 005023 5 SFC-GGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSV 80 (718)
Q Consensus 5 a~~-~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~v 80 (718)
.+. ..++++|++++ .+||.+|+.|.... .++++.+ .++..++||.++.+++.+. +|+.|+|+.+
T Consensus 14 ~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l---~~l~~~~-~~v~~~~vd~~~~~~~~~~--------~~i~~~Pt~~ 81 (118)
T 2f51_A 14 ALLNRIKEAPGLVLVDFFATWCGPCQRLGQIL---PSIAEAN-KDVTFIKVDVDKNGNAADA--------YGVSSIPALF 81 (118)
T ss_dssp HHHHHHHHCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHC-TTSEEEEEETTTCHHHHHH--------TTCCSSSEEE
T ss_pred HHHHHHHhCCCEEEEEEECCCCHHHHHHHHHH---HHHHHHC-CCeEEEEEECCCCHHHHHh--------cCCCCCCEEE
Confidence 344 45567888865 38999999998653 5667666 6799999999998776554 6789999999
Q ss_pred EeCC---CCceeec
Q 005023 81 FLSP---DLKPLMG 91 (718)
Q Consensus 81 fl~p---~g~p~~~ 91 (718)
|+.. +|+++..
T Consensus 82 ~~~~~~~~G~~~~~ 95 (118)
T 2f51_A 82 FVKKEGNEIKTLDQ 95 (118)
T ss_dssp EEEEETTEEEEEEE
T ss_pred EEeCCCCcceEEEe
Confidence 9976 4888753
No 77
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=98.22 E-value=2.3e-06 Score=75.07 Aligned_cols=73 Identities=12% Similarity=0.102 Sum_probs=54.8
Q ss_pred HHhhhh--hcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcE
Q 005023 5 SFCGGT--KTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLS 79 (718)
Q Consensus 5 a~~~Ak--~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~ 79 (718)
.+.++. +++|+++. .+||++|+.|.... .++++.+ .++..++||.++.+++.+. +|..|+|+.
T Consensus 11 ~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~---~~~~~~~-~~~~~~~vd~~~~~~~~~~--------~~v~~~Pt~ 78 (107)
T 1gh2_A 11 DFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAF---SSMSNKY-PQAVFLEVDVHQCQGTAAT--------NNISATPTF 78 (107)
T ss_dssp GHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHH---HHHHHHC-TTSEEEEEETTTSHHHHHH--------TTCCSSSEE
T ss_pred HHHHHHHhCCCCEEEEEEECCCChhhHHHHHHH---HHHHHHC-CCcEEEEEECccCHHHHHh--------cCCCcccEE
Confidence 344444 46888865 48999999998643 3455555 4689999999998776554 688999998
Q ss_pred EEeCCCCceee
Q 005023 80 VFLSPDLKPLM 90 (718)
Q Consensus 80 vfl~p~g~p~~ 90 (718)
+|+ .+|+.+.
T Consensus 79 ~~~-~~G~~~~ 88 (107)
T 1gh2_A 79 QFF-RNKVRID 88 (107)
T ss_dssp EEE-ETTEEEE
T ss_pred EEE-ECCeEEE
Confidence 888 7999875
No 78
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=98.21 E-value=1.2e-06 Score=78.60 Aligned_cols=75 Identities=20% Similarity=0.229 Sum_probs=57.3
Q ss_pred hhHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcE
Q 005023 3 RRSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLS 79 (718)
Q Consensus 3 ~~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~ 79 (718)
.+.++.+.+++|++++ .+||.+|+.|... | .++++.+.. +..++||.++.+++.+. +|+.|+|+.
T Consensus 20 ~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~-l--~~~~~~~~~-v~~~~vd~~~~~~l~~~--------~~v~~~Pt~ 87 (114)
T 2oe3_A 20 LTEFRNLIKQNDKLVIDFYATWCGPCKMMQPH-L--TKLIQAYPD-VRFVKCDVDESPDIAKE--------CEVTAMPTF 87 (114)
T ss_dssp HHHHHHHHHHCSEEEEEEECTTCHHHHHTHHH-H--HHHHHHCTT-SEEEEEETTTCHHHHHH--------TTCCSBSEE
T ss_pred HHHHHHHHhCCCEEEEEEECCCCHHHHHHHHH-H--HHHHHHCCC-CEEEEEECCCCHHHHHH--------CCCCcccEE
Confidence 3567778888999866 3899999999854 3 345555443 88899999998776554 578999998
Q ss_pred EEeCCCCceee
Q 005023 80 VFLSPDLKPLM 90 (718)
Q Consensus 80 vfl~p~g~p~~ 90 (718)
+|+ ++|+++.
T Consensus 88 ~~~-~~G~~~~ 97 (114)
T 2oe3_A 88 VLG-KDGQLIG 97 (114)
T ss_dssp EEE-ETTEEEE
T ss_pred EEE-eCCeEEE
Confidence 887 8999874
No 79
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=98.21 E-value=2e-06 Score=74.72 Aligned_cols=75 Identities=21% Similarity=0.296 Sum_probs=56.6
Q ss_pred hHHhhhhh--cCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCc
Q 005023 4 RSFCGGTK--TRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPL 78 (718)
Q Consensus 4 ~a~~~Ak~--e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~ 78 (718)
+.++.+.+ ++|+++. .+||++|+.|... | .++++.++.++..++||.++.+++.+. +|..|+|+
T Consensus 9 ~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~-l--~~~~~~~~~~~~~~~v~~~~~~~~~~~--------~~v~~~Pt 77 (106)
T 1xwb_A 9 ADLDGQLTKASGKLVVLDFFATWCGPCKMISPK-L--VELSTQFADNVVVLKVDVDECEDIAME--------YNISSMPT 77 (106)
T ss_dssp HHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHH-H--HHHHHHTTTTEEEEEEETTTCHHHHHH--------TTCCSSSE
T ss_pred HHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHH-H--HHHHHHhCCCeEEEEEeccchHHHHHH--------cCCCcccE
Confidence 34444444 6888865 3899999999864 4 457777767799999999998776554 68899999
Q ss_pred EEEeCCCCceee
Q 005023 79 SVFLSPDLKPLM 90 (718)
Q Consensus 79 ~vfl~p~g~p~~ 90 (718)
.+|+ ++|+.+.
T Consensus 78 ~~~~-~~G~~~~ 88 (106)
T 1xwb_A 78 FVFL-KNGVKVE 88 (106)
T ss_dssp EEEE-ETTEEEE
T ss_pred EEEE-cCCcEEE
Confidence 7777 7999875
No 80
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=98.21 E-value=1.2e-06 Score=79.05 Aligned_cols=75 Identities=19% Similarity=0.220 Sum_probs=57.3
Q ss_pred hHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcc-cEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcE
Q 005023 4 RSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDW-FVSIKVDREERPDVDKVYMTYVQALYGGGGWPLS 79 (718)
Q Consensus 4 ~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~-Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~ 79 (718)
+.++++.+++|++++ .+||++|+.|... | .++++.+... +..++||.++.+++.+. +|+.|+|+.
T Consensus 24 ~~f~~~l~~~k~vvv~f~a~~C~~C~~~~~~-l--~~l~~~~~~~~v~~~~vd~d~~~~~~~~--------~~v~~~Pt~ 92 (121)
T 2j23_A 24 DQFKQVTGGDKVVVIDFWATWCGPCKMIGPV-F--EKISDTPAGDKVGFYKVDVDEQSQIAQE--------VGIRAMPTF 92 (121)
T ss_dssp HHHHHHHSSSSCEEEEEECTTCSTHHHHHHH-H--HHHHTSTHHHHSEEEEEETTTCHHHHHH--------HTCCSSSEE
T ss_pred HHHHHHHcCCCEEEEEEECCCCHhHHHHHHH-H--HHHHHHCcCCcEEEEEEECcCCHHHHHH--------cCCCcccEE
Confidence 567777788998865 3899999999854 3 3455555433 89999999998776554 578899999
Q ss_pred EEeCCCCceee
Q 005023 80 VFLSPDLKPLM 90 (718)
Q Consensus 80 vfl~p~g~p~~ 90 (718)
+|+ ++|+++.
T Consensus 93 ~~~-~~G~~~~ 102 (121)
T 2j23_A 93 VFF-KNGQKID 102 (121)
T ss_dssp EEE-ETTEEEE
T ss_pred EEE-ECCeEEe
Confidence 888 6999875
No 81
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=98.19 E-value=1.2e-06 Score=77.67 Aligned_cols=75 Identities=21% Similarity=0.345 Sum_probs=57.5
Q ss_pred hhHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhh---cccEEEEecCCCCcchHHHHHHHHHHhcCCCCC
Q 005023 3 RRSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLN---DWFVSIKVDREERPDVDKVYMTYVQALYGGGGW 76 (718)
Q Consensus 3 ~~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln---~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~Gw 76 (718)
.+.++++.+++|++++ .+||++|+.|.... .++++.+. .+++.++||.++.+++.+. +|..|+
T Consensus 14 ~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~---~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~--------~~v~~~ 82 (120)
T 1mek_A 14 KSNFAEALAAHKYLLVEFYAPWCGHCKALAPEY---AKAAGKLKAEGSEIRLAKVDATEESDLAQQ--------YGVRGY 82 (120)
T ss_dssp TTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHH---HHHHHTTTTTCCCCBCEEEETTTCCSSHHH--------HTCCSS
T ss_pred hhhHHHHHccCCeEEEEEECCCCHHHHHhhHHH---HHHHHHHhccCCcEEEEEEcCCCCHHHHHH--------CCCCcc
Confidence 3456677788998865 48999999998643 24555554 3688999999999887665 578899
Q ss_pred CcEEEeCCCCcee
Q 005023 77 PLSVFLSPDLKPL 89 (718)
Q Consensus 77 P~~vfl~p~g~p~ 89 (718)
|+.+|+ ++|+.+
T Consensus 83 Pt~~~~-~~g~~~ 94 (120)
T 1mek_A 83 PTIKFF-RNGDTA 94 (120)
T ss_dssp SEEEEE-ESSCSS
T ss_pred cEEEEE-eCCCcC
Confidence 999999 688865
No 82
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=98.18 E-value=2.5e-06 Score=80.53 Aligned_cols=74 Identities=18% Similarity=0.188 Sum_probs=56.3
Q ss_pred hHHhhhhhc--CCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCc
Q 005023 4 RSFCGGTKT--RRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPL 78 (718)
Q Consensus 4 ~a~~~Ak~e--~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~ 78 (718)
+.++.+.++ +|++|+ .+||.+|+.|.... .++++.. .++..++||.++.+++.+. +|+.|+|+
T Consensus 21 ~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l---~~l~~~~-~~v~~~~vd~~~~~~l~~~--------~~v~~~Pt 88 (153)
T 2wz9_A 21 GQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVM---AELAKEL-PQVSFVKLEAEGVPEVSEK--------YEISSVPT 88 (153)
T ss_dssp HHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHH---HHHHHHC-TTSEEEEEETTTSHHHHHH--------TTCCSSSE
T ss_pred HHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHH---HHHHHHc-CCeEEEEEECCCCHHHHHH--------cCCCCCCE
Confidence 445556666 888866 38999999998542 3444443 4699999999998776554 68899999
Q ss_pred EEEeCCCCceee
Q 005023 79 SVFLSPDLKPLM 90 (718)
Q Consensus 79 ~vfl~p~g~p~~ 90 (718)
++|++ +|+++.
T Consensus 89 ~~~~~-~G~~~~ 99 (153)
T 2wz9_A 89 FLFFK-NSQKID 99 (153)
T ss_dssp EEEEE-TTEEEE
T ss_pred EEEEE-CCEEEE
Confidence 99999 999874
No 83
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=98.17 E-value=2e-06 Score=81.28 Aligned_cols=74 Identities=9% Similarity=0.031 Sum_probs=56.8
Q ss_pred hHHhhhh--hcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCc
Q 005023 4 RSFCGGT--KTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPL 78 (718)
Q Consensus 4 ~a~~~Ak--~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~ 78 (718)
+.++++. +++|++++ .+||..|+.|.... .++++.++..+..++||.++.|++.+. +++.|+|+
T Consensus 12 ~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l---~~l~~~~~~~~~~~~vd~d~~~~l~~~--------~~v~~~Pt 80 (149)
T 3gix_A 12 KEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDIL---SKTSSDLSKMAAIYLVDVDQTAVYTQY--------FDISYIPS 80 (149)
T ss_dssp HHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHH---HHHHTTTTTTEEEEEEETTTCCHHHHH--------TTCCSSSE
T ss_pred HHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHH---HHHHHHccCceEEEEEECCcCHHHHHH--------cCCCccCe
Confidence 3455554 46899876 38999999998643 245555666699999999999987765 67899999
Q ss_pred EEEeCCCCcee
Q 005023 79 SVFLSPDLKPL 89 (718)
Q Consensus 79 ~vfl~p~g~p~ 89 (718)
++ +.++|+++
T Consensus 81 ~~-~~~~G~~v 90 (149)
T 3gix_A 81 TV-FFFNGQHM 90 (149)
T ss_dssp EE-EEETTEEE
T ss_pred EE-EEECCeEE
Confidence 99 66789988
No 84
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=98.15 E-value=3.8e-06 Score=76.72 Aligned_cols=74 Identities=16% Similarity=0.071 Sum_probs=57.4
Q ss_pred hHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEE
Q 005023 4 RSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSV 80 (718)
Q Consensus 4 ~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~v 80 (718)
+.++++.+++|++++ .+||.+|+.|... | .++++.+ .++..++||.++.+++.+. +|+.|+|+.+
T Consensus 28 ~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~-l--~~l~~~~-~~v~~~~vd~d~~~~l~~~--------~~v~~~Pt~~ 95 (125)
T 1r26_A 28 EQFRNIMSEDILTVAWFTAVWCGPCKTIERP-M--EKIAYEF-PTVKFAKVDADNNSEIVSK--------CRVLQLPTFI 95 (125)
T ss_dssp HHHHHHHHSSSCEEEEEECTTCHHHHHTHHH-H--HHHHHHC-TTSEEEEEETTTCHHHHHH--------TTCCSSSEEE
T ss_pred HHHHHHHccCCEEEEEEECCcCHhHHHHHHH-H--HHHHHHC-CCCEEEEEECCCCHHHHHH--------cCCCcccEEE
Confidence 556667788898866 3899999999864 3 3455555 4699999999998876654 6789999988
Q ss_pred EeCCCCceee
Q 005023 81 FLSPDLKPLM 90 (718)
Q Consensus 81 fl~p~g~p~~ 90 (718)
|+ ++|+++.
T Consensus 96 i~-~~G~~~~ 104 (125)
T 1r26_A 96 IA-RSGKMLG 104 (125)
T ss_dssp EE-ETTEEEE
T ss_pred EE-eCCeEEE
Confidence 77 8999874
No 85
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=98.13 E-value=2.6e-06 Score=81.44 Aligned_cols=74 Identities=19% Similarity=0.141 Sum_probs=57.5
Q ss_pred hHHhhhh--hcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCc
Q 005023 4 RSFCGGT--KTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPL 78 (718)
Q Consensus 4 ~a~~~Ak--~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~ 78 (718)
+.++++- +++|||++ .+||..|+.|+. +| +++|+......+.+|||.||.|++... +|+.+.||
T Consensus 30 ~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~P-vl--eelA~e~~~~v~f~kVDVDe~~e~a~~--------y~V~siPT 98 (160)
T 2av4_A 30 WAVDQAIVNEDERLVCIRFGHDYDPDCMKMDE-LL--YKVADDIKNFCVIYLVDITEVPDFNTM--------YELYDPVS 98 (160)
T ss_dssp HHHHHHHHHCSSSEEEEEEECTTSHHHHHHHH-HH--HHHHHHHTTTEEEEEEETTTCCTTTTT--------TTCCSSEE
T ss_pred HHHHHHHHhcCCCEEEEEEECCCChhHHHHHH-HH--HHHHHHccCCcEEEEEECCCCHHHHHH--------cCCCCCCE
Confidence 3455544 46888865 599999999994 44 457777655578889999999999876 78899999
Q ss_pred EEEeCCCCcee
Q 005023 79 SVFLSPDLKPL 89 (718)
Q Consensus 79 ~vfl~p~g~p~ 89 (718)
.+|+- +|+.+
T Consensus 99 ~~fFk-~G~~v 108 (160)
T 2av4_A 99 VMFFY-RNKHM 108 (160)
T ss_dssp EEEEE-TTEEE
T ss_pred EEEEE-CCEEE
Confidence 98885 78887
No 86
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.13 E-value=3.7e-06 Score=76.56 Aligned_cols=65 Identities=18% Similarity=0.312 Sum_probs=52.1
Q ss_pred cCCcEEE---EcCCchhhhhhccccCcHHHHHHhh--cccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCC
Q 005023 12 TRRTHFL---INTCHWCHVMEVESFEDEGVAKLLN--DWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDL 86 (718)
Q Consensus 12 e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln--~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g 86 (718)
++|++++ .+||++|+.|... | .++++.+. .+++.++||.++.+.+.+. +++.|+|+++|+++.+
T Consensus 24 ~~~~vlv~f~a~wC~~C~~~~p~-~--~~~~~~~~~~~~~~~~~vd~~~~~~~~~~--------~~v~~~Pt~~~~~~g~ 92 (133)
T 2dj3_A 24 PKKDVLIEFYAPWCGHCKQLEPI-Y--TSLGKKYKGQKDLVIAKMDATANDITNDQ--------YKVEGFPTIYFAPSGD 92 (133)
T ss_dssp TTSEEEEEECCTTCSHHHHHHHH-H--HHHHHHHTTSSSEEEEEECTTTSCCCCSS--------CCCSSSSEEEEECTTC
T ss_pred CCCcEEEEEECCCChhHHHHHHH-H--HHHHHHhcCCCCEEEEEecCCcCHHHHhh--------cCCCcCCEEEEEeCCC
Confidence 5888866 3899999999965 4 45777776 4699999999998877543 6889999999998766
Q ss_pred c
Q 005023 87 K 87 (718)
Q Consensus 87 ~ 87 (718)
+
T Consensus 93 ~ 93 (133)
T 2dj3_A 93 K 93 (133)
T ss_dssp T
T ss_pred c
Confidence 4
No 87
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=98.12 E-value=5e-06 Score=82.64 Aligned_cols=75 Identities=15% Similarity=0.212 Sum_probs=60.3
Q ss_pred hHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEE
Q 005023 4 RSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSV 80 (718)
Q Consensus 4 ~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~v 80 (718)
+.++.+..++|++|+ .+||++|+.|.... .++++.++.+++.++||.++.+++.+. +|+.|+|+++
T Consensus 105 ~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~---~~l~~~~~~~v~~~~vd~~~~~~l~~~--------~~v~~~Pt~~ 173 (210)
T 3apq_A 105 REFDAAVNSGELWFVNFYSPGCSHCHDLAPTW---REFAKEVDGLLRIGAVNCGDDRMLCRM--------KGVNSYPSLF 173 (210)
T ss_dssp HHHHHHHHHSCCEEEEEECTTCHHHHHHHHHH---HHHHHHTBTTBEEEEEETTTCHHHHHH--------TTCCSSSEEE
T ss_pred HHHHHHHccCCcEEEEEeCCCChhHHHHHHHH---HHHHHHhcCceEEEEEECCccHHHHHH--------cCCCcCCeEE
Confidence 456666678899866 38999999998643 578888877899999999998766554 6889999999
Q ss_pred EeCCCCceee
Q 005023 81 FLSPDLKPLM 90 (718)
Q Consensus 81 fl~p~g~p~~ 90 (718)
|+ ++|+++.
T Consensus 174 ~~-~~G~~~~ 182 (210)
T 3apq_A 174 IF-RSGMAAV 182 (210)
T ss_dssp EE-CTTSCCE
T ss_pred EE-ECCCcee
Confidence 99 8999764
No 88
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=98.11 E-value=2.9e-06 Score=75.22 Aligned_cols=75 Identities=17% Similarity=0.116 Sum_probs=56.7
Q ss_pred hhHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcE
Q 005023 3 RRSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLS 79 (718)
Q Consensus 3 ~~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~ 79 (718)
.+-++++.+++|++++ .+||++|+.|.... .++++... ++..++||.++.+++.+. +|+.|+|+.
T Consensus 16 ~~~f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l---~~l~~~~~-~v~~~~vd~~~~~~~~~~--------~~v~~~Pt~ 83 (112)
T 1syr_A 16 QAEFDSIISQNELVIVDFFAEWCGPCKRIAPFY---EECSKTYT-KMVFIKVDVDEVSEVTEK--------ENITSMPTF 83 (112)
T ss_dssp HHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHH---HHHHHHCT-TSEEEEEETTTTHHHHHH--------TTCCSSSEE
T ss_pred HHHHHHHHccCCeEEEEEECCCCHHHHHHHHHH---HHHHHHcC-CCEEEEEECCCCHHHHHH--------cCCCcccEE
Confidence 3556777788999865 38999999998643 44555543 589999999988765544 688999997
Q ss_pred EEeCCCCceee
Q 005023 80 VFLSPDLKPLM 90 (718)
Q Consensus 80 vfl~p~g~p~~ 90 (718)
+|+ .+|+.+.
T Consensus 84 ~~~-~~G~~~~ 93 (112)
T 1syr_A 84 KVY-KNGSSVD 93 (112)
T ss_dssp EEE-ETTEEEE
T ss_pred EEE-ECCcEEE
Confidence 776 6999875
No 89
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=98.11 E-value=4.1e-06 Score=78.44 Aligned_cols=67 Identities=22% Similarity=0.192 Sum_probs=54.4
Q ss_pred cCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCce
Q 005023 12 TRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKP 88 (718)
Q Consensus 12 e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p 88 (718)
++|++++ .+||+.|+.|.... .++++.+..++..++||.++.+++.+. +|+.|+|+++|+ .+|++
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l---~~l~~~~~~~v~~~~vd~d~~~~~~~~--------~~i~~~Pt~~~~-~~G~~ 89 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVL---YSIAEKVKNFAVIYLVDITEVPDFNKM--------YELYDPCTVMFF-FRNKH 89 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHH---HHHHHHHTTTEEEEEEETTTCCTTTTS--------SCSCSSCEEEEE-ETTEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHH---HHHHHHhCCCeEEEEEccccCHHHHHH--------cCCCCCCEEEEE-ECCcE
Confidence 5888866 48999999998643 467777766799999999999987665 688999999998 58888
Q ss_pred ee
Q 005023 89 LM 90 (718)
Q Consensus 89 ~~ 90 (718)
+.
T Consensus 90 v~ 91 (142)
T 1qgv_A 90 IM 91 (142)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 90
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=98.11 E-value=5.5e-06 Score=71.58 Aligned_cols=74 Identities=20% Similarity=0.209 Sum_probs=54.4
Q ss_pred hHHhhhhh--cCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCc
Q 005023 4 RSFCGGTK--TRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPL 78 (718)
Q Consensus 4 ~a~~~Ak~--e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~ 78 (718)
+.++++.+ ++|++++ .+||++|+.|... | .++++... ++..++||.++.|++.+. +|..++|+
T Consensus 8 ~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~-l--~~~~~~~~-~~~~~~v~~~~~~~~~~~--------~~v~~~Pt 75 (104)
T 2vim_A 8 ADLEKLINENKGRLIVVDFFAQWCGPCRNIAPK-V--EALAKEIP-EVEFAKVDVDQNEEAAAK--------YSVTAMPT 75 (104)
T ss_dssp HHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHH-H--HHHHHHCT-TSEEEEEETTTCHHHHHH--------TTCCSSSE
T ss_pred HHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHH-H--HHHHHHCC-CCEEEEEeccCCHHHHHH--------cCCccccE
Confidence 34555555 6888865 4899999999864 3 34555543 688999999998776554 67889999
Q ss_pred EEEeCCCCceee
Q 005023 79 SVFLSPDLKPLM 90 (718)
Q Consensus 79 ~vfl~p~g~p~~ 90 (718)
.+|+. +|+++.
T Consensus 76 ~~~~~-~g~~~~ 86 (104)
T 2vim_A 76 FVFIK-DGKEVD 86 (104)
T ss_dssp EEEEE-TTEEEE
T ss_pred EEEEe-CCcEEE
Confidence 88775 999875
No 91
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=98.10 E-value=2.9e-06 Score=75.25 Aligned_cols=79 Identities=23% Similarity=0.252 Sum_probs=55.0
Q ss_pred HHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEE
Q 005023 5 SFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVF 81 (718)
Q Consensus 5 a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vf 81 (718)
.+ .+.+++|++++ .+||++|+.|... | .++++.. .++..++||.++.+++.+. +|+.|+|+.+|
T Consensus 12 ~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~-l--~~~~~~~-~~v~~~~vd~~~~~~l~~~--------~~v~~~Pt~~~ 78 (110)
T 2l6c_A 12 GM-AHFEGLSDAIVFFHKNLCPHCKNMEKV-L--DKFGARA-PQVAISSVDSEARPELMKE--------LGFERVPTLVF 78 (110)
T ss_dssp SH-HHHTTCSEEEEEEECSSCSTHHHHHHH-H--HHHHTTC-TTSCEEEEEGGGCHHHHHH--------TTCCSSCEEEE
T ss_pred HH-HHHHcCCCEEEEEECCCCHhHHHHHHH-H--HHHHHHC-CCcEEEEEcCcCCHHHHHH--------cCCcccCEEEE
Confidence 35 45667788765 3899999999742 2 2222222 2477888999888776554 68899999999
Q ss_pred eCCCCceeec-ccccCC
Q 005023 82 LSPDLKPLMG-GTYFPP 97 (718)
Q Consensus 82 l~p~g~p~~~-~~y~p~ 97 (718)
+ ++|+++.. .+++++
T Consensus 79 ~-~~G~~v~~~~G~~~~ 94 (110)
T 2l6c_A 79 I-RDGKVAKVFSGIMNP 94 (110)
T ss_dssp E-ESSSEEEEEESCCCH
T ss_pred E-ECCEEEEEEcCCCCH
Confidence 9 89998853 355554
No 92
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.10 E-value=4.7e-06 Score=86.46 Aligned_cols=67 Identities=15% Similarity=0.232 Sum_probs=55.4
Q ss_pred cCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCce
Q 005023 12 TRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKP 88 (718)
Q Consensus 12 e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p 88 (718)
.+|+||+ .+||++|+.|.... .++++.++.+++.++||.++.|++.+. +|+.|+|+++|+ .+|++
T Consensus 25 ~~~~v~v~f~a~wC~~C~~~~p~~---~~~~~~~~~~~~~~~vd~~~~~~~~~~--------~~v~~~Pt~~~~-~~G~~ 92 (287)
T 3qou_A 25 MTTPVLFYFWSERSQHCLQLTPIL---ESLAAQYNGQFILAKLDCDAEQMIAAQ--------FGLRAIPTVYLF-QNGQP 92 (287)
T ss_dssp TTSCEEEEEECTTCTTTTTTHHHH---HHHHHHHTSSSEEEEEETTTCHHHHHT--------TTCCSSSEEEEE-ETTEE
T ss_pred CCCeEEEEEECCCChHHHHHHHHH---HHHHHHcCCCeEEEEEeCccCHHHHHH--------cCCCCCCeEEEE-ECCEE
Confidence 4888876 38999999998643 577777877899999999999876654 688999999999 79998
Q ss_pred ee
Q 005023 89 LM 90 (718)
Q Consensus 89 ~~ 90 (718)
+.
T Consensus 93 ~~ 94 (287)
T 3qou_A 93 VD 94 (287)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 93
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=98.09 E-value=6.6e-06 Score=73.37 Aligned_cols=72 Identities=11% Similarity=0.125 Sum_probs=52.2
Q ss_pred hHHhhhhh--cCCcEEE---EcCCchhhhhhccccCcHHHHHHhhc-ccEEEEecCCCCcchHHHHHHHHHHhcCCCCCC
Q 005023 4 RSFCGGTK--TRRTHFL---INTCHWCHVMEVESFEDEGVAKLLND-WFVSIKVDREERPDVDKVYMTYVQALYGGGGWP 77 (718)
Q Consensus 4 ~a~~~Ak~--e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~-~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP 77 (718)
+.++...+ ++|++++ .+||++|+.|.. .+.++.++ ++..++||.++.+++.+. +|+.|+|
T Consensus 22 ~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~------~~~~~~~~~~~~~~~vd~~~~~~~~~~--------~~v~~~P 87 (117)
T 2xc2_A 22 GDLESLLEQHKNKLVVVDFFATWCGPCKTIAP------LFKELSEKYDAIFVKVDVDKLEETARK--------YNISAMP 87 (117)
T ss_dssp THHHHHHHHTTTSCEEEEEECTTCHHHHHHHH------HHHHHHTTSSSEEEEEETTTSHHHHHH--------TTCCSSS
T ss_pred HHHHHHHHhCCCCEEEEEEECCCCHhHHHHhH------HHHHHHHHcCcEEEEEECCccHHHHHH--------cCCCccc
Confidence 33444444 6888865 389999999984 33333333 688899999988776554 6889999
Q ss_pred cEEEeCCCCceee
Q 005023 78 LSVFLSPDLKPLM 90 (718)
Q Consensus 78 ~~vfl~p~g~p~~ 90 (718)
+.+|+ ++|+.+.
T Consensus 88 t~~~~-~~G~~~~ 99 (117)
T 2xc2_A 88 TFIAI-KNGEKVG 99 (117)
T ss_dssp EEEEE-ETTEEEE
T ss_pred eEEEE-eCCcEEE
Confidence 98777 7999874
No 94
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=98.03 E-value=5.4e-06 Score=69.11 Aligned_cols=57 Identities=18% Similarity=0.134 Sum_probs=46.5
Q ss_pred EEcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCce
Q 005023 18 LINTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKP 88 (718)
Q Consensus 18 ~y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p 88 (718)
..+||++|+.|... + .++++.++.++..++||.++.+++.+. +|..|+|+.+| +|++
T Consensus 9 ~~~~C~~C~~~~~~-l--~~~~~~~~~~~~~~~vd~~~~~~~~~~--------~~v~~~Pt~~~---~G~~ 65 (85)
T 1nho_A 9 TSPTCPYCPMAIEV-V--DEAKKEFGDKIDVEKIDIMVDREKAIE--------YGLMAVPAIAI---NGVV 65 (85)
T ss_dssp SCSSSCCSTTHHHH-H--HHHHHHHCSSCCEEEECTTTCGGGGGG--------TCSSCSSEEEE---TTTE
T ss_pred ECCCCcchHHHHHH-H--HHHHHHhcCCeEEEEEECCCCHHHHHh--------CCceeeCEEEE---CCEE
Confidence 35899999999863 3 456666766899999999999887654 68899999988 8988
No 95
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=98.03 E-value=7.9e-06 Score=72.02 Aligned_cols=66 Identities=17% Similarity=0.124 Sum_probs=48.4
Q ss_pred cCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCC-CCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCc
Q 005023 12 TRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDRE-ERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLK 87 (718)
Q Consensus 12 e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~e-e~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~ 87 (718)
.+|++++ .+||++|+.|... | .++++.+. ++..++||.+ +.+++.+. +|..|+|+ +++.++|+
T Consensus 23 ~~~~vlv~f~a~wC~~C~~~~~~-l--~~~~~~~~-~v~~~~vd~~~~~~~~~~~--------~~v~~~Pt-~~~~~~G~ 89 (111)
T 2pu9_C 23 GDKPVVLDMFTQWCGPSKAMAPK-Y--EKLAEEYL-DVIFLKLDCNQENKTLAKE--------LGIRVVPT-FKILKENS 89 (111)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHH-H--HHHHHHCT-TSEEEEEECSSTTHHHHHH--------HCCSBSSE-EEEESSSS
T ss_pred CCCEEEEEEECCcCHhHHHHCHH-H--HHHHHHCC-CeEEEEEecCcchHHHHHH--------cCCCeeeE-EEEEeCCc
Confidence 5788865 3899999999864 2 34555544 4888999997 56655544 57899999 55669999
Q ss_pred eee
Q 005023 88 PLM 90 (718)
Q Consensus 88 p~~ 90 (718)
++.
T Consensus 90 ~~~ 92 (111)
T 2pu9_C 90 VVG 92 (111)
T ss_dssp EEE
T ss_pred EEE
Confidence 874
No 96
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=97.26 E-value=7.7e-07 Score=76.95 Aligned_cols=71 Identities=18% Similarity=0.264 Sum_probs=54.9
Q ss_pred hhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCC
Q 005023 8 GGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSP 84 (718)
Q Consensus 8 ~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p 84 (718)
..++++|+++. .+||++|+.|... + .++++.+..++..++||.++.+++.+. +|..++|+.+|+ +
T Consensus 14 ~~~~~~~~~~v~f~~~~C~~C~~~~~~-~--~~~~~~~~~~~~~~~v~~~~~~~~~~~--------~~v~~~Pt~~~~-~ 81 (106)
T 2yj7_A 14 EVLKSDKPVLVDFWAPWCGPCRMIAPI-I--EELAKEYEGKVKVVKVNVDENPNTAAQ--------YGIRSIPTLLLF-K 81 (106)
Confidence 44567788755 4899999999864 3 556667766788889999988776654 467899999999 8
Q ss_pred CCceee
Q 005023 85 DLKPLM 90 (718)
Q Consensus 85 ~g~p~~ 90 (718)
+|+.+.
T Consensus 82 ~g~~~~ 87 (106)
T 2yj7_A 82 NGQVVD 87 (106)
Confidence 999874
No 97
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=98.00 E-value=5.2e-06 Score=74.17 Aligned_cols=68 Identities=18% Similarity=0.288 Sum_probs=52.8
Q ss_pred Hhhh-hhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhc-----ccEEEEecCCCCcchHHHHHHHHHHhcCCCCC
Q 005023 6 FCGG-TKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLND-----WFVSIKVDREERPDVDKVYMTYVQALYGGGGW 76 (718)
Q Consensus 6 ~~~A-k~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~-----~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~Gw 76 (718)
+.+. .+++|++++ .+||++|+.|... | .++++.+.. ++..++||.++.+ + ++ ++.|+
T Consensus 17 f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~-~--~~~~~~~~~~~~~~~v~~~~vd~~~~~-~-------~~---~v~~~ 82 (121)
T 2djj_A 17 YNEIVLDDTKDVLIEFYAPWCGHCKALAPK-Y--EELGALYAKSEFKDRVVIAKVDATAND-V-------PD---EIQGF 82 (121)
T ss_dssp TTTSSSCTTSCEEEEEECSSCTTHHHHHHH-H--HHHHHHHTTSSCTTSSEEEEEETTTSC-C-------SS---CCSSS
T ss_pred HHHHhhcCCCCEEEEEECCCCHhHHHhhHH-H--HHHHHHHhhcccCCceEEEEEECcccc-c-------cc---ccCcC
Confidence 3444 357888866 3899999999874 4 477888765 7999999999876 2 12 78899
Q ss_pred CcEEEeCCCCc
Q 005023 77 PLSVFLSPDLK 87 (718)
Q Consensus 77 P~~vfl~p~g~ 87 (718)
|+++|+++.|+
T Consensus 83 Pt~~~~~~~~~ 93 (121)
T 2djj_A 83 PTIKLYPAGAK 93 (121)
T ss_dssp SEEEEECSSCT
T ss_pred CeEEEEeCcCC
Confidence 99999998877
No 98
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=97.99 E-value=5.7e-06 Score=76.24 Aligned_cols=65 Identities=12% Similarity=0.192 Sum_probs=47.0
Q ss_pred cCCcEEE---EcCCchhhhhhccccCcHHHHHHhhc-ccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEe-CCCC
Q 005023 12 TRRTHFL---INTCHWCHVMEVESFEDEGVAKLLND-WFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFL-SPDL 86 (718)
Q Consensus 12 e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~-~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl-~p~g 86 (718)
.+|++|+ .+||++|+.|.. .+.++.++ .++.++||.++.+++.+. +|+.|+|+++|+ +++|
T Consensus 39 ~~k~vvv~F~a~wC~~C~~~~p------~l~~l~~~~~v~~~~vd~~~~~~l~~~--------~~v~~~Pt~~~~~~~~g 104 (133)
T 3cxg_A 39 QNSSIVIKFGAVWCKPCNKIKE------YFKNQLNYYYVTLVDIDVDIHPKLNDQ--------HNIKALPTFEFYFNLNN 104 (133)
T ss_dssp CCSEEEEEEECTTCHHHHHTHH------HHHGGGGTEECEEEEEETTTCHHHHHH--------TTCCSSSEEEEEEEETT
T ss_pred CCCEEEEEEECCCCHHHHHHHH------HHHHHHHhcCEEEEEEeccchHHHHHh--------cCCCCCCEEEEEEecCC
Confidence 3678765 389999999863 33333332 378889999998776554 688999999999 5677
Q ss_pred c--eee
Q 005023 87 K--PLM 90 (718)
Q Consensus 87 ~--p~~ 90 (718)
+ ++.
T Consensus 105 ~g~~~~ 110 (133)
T 3cxg_A 105 EWVLVH 110 (133)
T ss_dssp EEEEEE
T ss_pred CeEEEE
Confidence 7 553
No 99
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=97.98 E-value=7.4e-06 Score=68.25 Aligned_cols=57 Identities=21% Similarity=0.191 Sum_probs=45.6
Q ss_pred EEcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCce
Q 005023 18 LINTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKP 88 (718)
Q Consensus 18 ~y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p 88 (718)
..+||++|+.|... + .++++..+.++..++||.++.+++.+. +|..|+|+.+| +|++
T Consensus 10 ~~~~C~~C~~~~~~-l--~~~~~~~~~~~~~~~vd~~~~~~~~~~--------~~v~~~Pt~~~---~G~~ 66 (85)
T 1fo5_A 10 TSPMCPHCPAAKRV-V--EEVANEMPDAVEVEYINVMENPQKAME--------YGIMAVPTIVI---NGDV 66 (85)
T ss_dssp ECCCSSCCCTHHHH-H--HHHHHHCSSSEEEEEEESSSSCCTTTS--------TTTCCSSEEEE---TTEE
T ss_pred eCCCCCchHHHHHH-H--HHHHHHcCCceEEEEEECCCCHHHHHH--------CCCcccCEEEE---CCEE
Confidence 35899999999853 3 456666666789999999999887665 57889999988 8987
No 100
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=97.94 E-value=1.7e-05 Score=69.27 Aligned_cols=70 Identities=16% Similarity=0.240 Sum_probs=51.7
Q ss_pred HHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhc------ccEEEEecCCCCcchHHHHHHHHHHhcCCCC
Q 005023 5 SFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLND------WFVSIKVDREERPDVDKVYMTYVQALYGGGG 75 (718)
Q Consensus 5 a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~------~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~G 75 (718)
.+++..+ +|++++ .+||++|+.|.. .+.++..+ ++..++||.++.+++.+. +|+.+
T Consensus 14 ~~~~~~~-~~~~lv~f~~~~C~~C~~~~~------~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~--------~~v~~ 78 (111)
T 3uvt_A 14 NFDDTIA-EGITFIKFYAPWCGHCKTLAP------TWEELSKKEFPGLAGVKIAEVDCTAERNICSK--------YSVRG 78 (111)
T ss_dssp THHHHHH-SSEEEEEEECSSCHHHHHHHH------HHHHHHTCCCCC-CCEEEEEEETTTCHHHHHH--------TTCCS
T ss_pred hHHHHhc-CCcEEEEEECCCChhHHHhhH------HHHHHHHHhhccCCceEEEEEeccccHhHHHh--------cCCCc
Confidence 4455555 777765 489999999884 44444433 578889999998876554 68899
Q ss_pred CCcEEEeCCCCceee
Q 005023 76 WPLSVFLSPDLKPLM 90 (718)
Q Consensus 76 wP~~vfl~p~g~p~~ 90 (718)
+|+.+|+ ++|+.+.
T Consensus 79 ~Pt~~~~-~~g~~~~ 92 (111)
T 3uvt_A 79 YPTLLLF-RGGKKVS 92 (111)
T ss_dssp SSEEEEE-ETTEEEE
T ss_pred ccEEEEE-eCCcEEE
Confidence 9998888 7888764
No 101
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.94 E-value=9.5e-06 Score=73.32 Aligned_cols=59 Identities=22% Similarity=0.163 Sum_probs=46.7
Q ss_pred EcCCchhhhhhccccCcHHHHHHhhc-ccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCcee
Q 005023 19 INTCHWCHVMEVESFEDEGVAKLLND-WFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPL 89 (718)
Q Consensus 19 y~~C~wChvM~~esf~d~~va~~ln~-~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p~ 89 (718)
.+||++|+.|.... .++++.+.. ++..++||.++.+++.+. +++.|+|+++|+ ++|++.
T Consensus 31 a~wC~~C~~~~p~~---~~~~~~~~~~~v~~~~vd~~~~~~~~~~--------~~v~~~Pt~~~~-~~G~~~ 90 (126)
T 1x5e_A 31 APWCPACQNLQPEW---ESFAEWGEDLEVNIAKVDVTEQPGLSGR--------FIINALPTIYHC-KDGEFR 90 (126)
T ss_dssp CSSCHHHHHHHHHH---HHHHHHHGGGTCEEEEEETTTCHHHHHH--------TTCCSSSEEEEE-ETTEEE
T ss_pred CCCCHHHHHHhHHH---HHHHHHhccCCeEEEEEECcCCHHHHHH--------cCCcccCEEEEE-eCCeEE
Confidence 48999999998643 346666654 799999999988776554 678999999999 899964
No 102
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=97.93 E-value=2.7e-05 Score=71.47 Aligned_cols=100 Identities=8% Similarity=0.007 Sum_probs=63.5
Q ss_pred hhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhc-ccEEEEecCCCCcchHHHHHHH----------------
Q 005023 7 CGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLND-WFVSIKVDREERPDVDKVYMTY---------------- 66 (718)
Q Consensus 7 ~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~-~Fv~vkvD~ee~pd~d~~y~~~---------------- 66 (718)
..+.-.+|++++ .+||+.|+.|....- ++.+.+.+ ++..|.|+.++.++.-..|.+.
T Consensus 25 ~l~~~~gk~vll~f~~~~C~~C~~~~~~l~---~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 101 (148)
T 3hcz_A 25 YLYDVQAKYTILFFWDSQCGHCQQETPKLY---DWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHT 101 (148)
T ss_dssp CGGGCCCSEEEEEEECGGGCTTCSHHHHHH---HHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCC
T ss_pred EhHHcCCCEEEEEEECCCCccHHHHHHHHH---HHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccch
Confidence 344456888865 489999998874221 24444443 4777778777665533322221
Q ss_pred -HHHhcCCCCCCcEEEeCCCCceeecccccCCCCCCCcccHHHHHHHHHHHH
Q 005023 67 -VQALYGGGGWPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRKVKDAW 117 (718)
Q Consensus 67 -~q~~~g~~GwP~~vfl~p~g~p~~~~~y~p~~~~~~~~~f~~~L~~i~~~w 117 (718)
+...+|..++|++++++++|+++.... . .+.+.++++.+.+.-
T Consensus 102 ~~~~~~~i~~~P~~~lid~~G~i~~~~~--g------~~~~~~~l~~l~~~l 145 (148)
T 3hcz_A 102 DFKITYDIYATPVLYVLDKNKVIIAKRI--G------YENLDDFLVQYEKSL 145 (148)
T ss_dssp CHHHHHCCCSSCEEEEECTTCBEEEESC--C------GGGHHHHHHHHHHHH
T ss_pred hHHHhcCcCCCCEEEEECCCCcEEEecC--C------HHHHHHHHHHHHHHh
Confidence 223468899999999999999986431 1 235777777665543
No 103
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=97.93 E-value=1.2e-05 Score=80.81 Aligned_cols=74 Identities=16% Similarity=0.239 Sum_probs=59.4
Q ss_pred HHhh-hhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEE
Q 005023 5 SFCG-GTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSV 80 (718)
Q Consensus 5 a~~~-Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~v 80 (718)
.+.. ..+++|++++ .+||.+|+.|.... .++++.++.++..++||.++.+++.+. +|+.|+|+.+
T Consensus 21 ~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l---~~l~~~~~~~v~~~~vd~d~~~~l~~~--------~~v~~~Pt~~ 89 (222)
T 3dxb_A 21 SFDTDVLKADGAILVDFWAEWCGPCKMIAPIL---DEIADEYQGKLTVAKLNIDQNPGTAPK--------YGIRGIPTLL 89 (222)
T ss_dssp THHHHHTTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTCEEEEEETTTCTTTGGG--------GTCCSBSEEE
T ss_pred HHHHHHHhcCCEEEEEEECCcCHHHHHHHHHH---HHHHHHhcCCcEEEEEECCCCHHHHHH--------cCCCcCCEEE
Confidence 3444 3567898876 38999999998644 677888887899999999999988765 6889999998
Q ss_pred EeCCCCceee
Q 005023 81 FLSPDLKPLM 90 (718)
Q Consensus 81 fl~p~g~p~~ 90 (718)
|+. +|+.+.
T Consensus 90 ~~~-~G~~~~ 98 (222)
T 3dxb_A 90 LFK-NGEVAA 98 (222)
T ss_dssp EEE-TTEEEE
T ss_pred EEE-CCeEEE
Confidence 885 898874
No 104
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=97.92 E-value=1.4e-05 Score=71.77 Aligned_cols=66 Identities=18% Similarity=0.130 Sum_probs=47.7
Q ss_pred cCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCC-CCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCc
Q 005023 12 TRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDRE-ERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLK 87 (718)
Q Consensus 12 e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~e-e~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~ 87 (718)
++|++++ .+||++|+.|.... .++++... +++.++||.+ +.+++.+. +|..|+|+.+| .++|+
T Consensus 36 ~~~~~vv~f~a~wC~~C~~~~~~l---~~~~~~~~-~~~~~~vd~~~~~~~~~~~--------~~v~~~Pt~~~-~~~G~ 102 (124)
T 1faa_A 36 GDKPVVLDMFTQWCGPCKAMAPKY---EKLAEEYL-DVIFLKLDCNQENKTLAKE--------LGIRVVPTFKI-LKENS 102 (124)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHH---HHHHHHCT-TSEEEEEECSSTTHHHHHH--------HCCSSSSEEEE-EETTE
T ss_pred CCCEEEEEEECCcCHhHHHHhHHH---HHHHHHCC-CCEEEEEecCcchHHHHHH--------cCCCeeeEEEE-EeCCc
Confidence 6788865 38999999998642 34555443 4888899987 55655543 58899999555 48999
Q ss_pred eee
Q 005023 88 PLM 90 (718)
Q Consensus 88 p~~ 90 (718)
++.
T Consensus 103 ~~~ 105 (124)
T 1faa_A 103 VVG 105 (124)
T ss_dssp EEE
T ss_pred EEE
Confidence 874
No 105
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=97.91 E-value=1.5e-05 Score=73.65 Aligned_cols=73 Identities=19% Similarity=0.299 Sum_probs=51.8
Q ss_pred HhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEe
Q 005023 6 FCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFL 82 (718)
Q Consensus 6 ~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl 82 (718)
+..+..+++.+++ .+||++|+.|... | .++++.+..++..++||.++.+++.+. +|..|+|+.+|+
T Consensus 43 ~~~~~~~~~~vvv~f~~~~C~~C~~~~~~-l--~~l~~~~~~~v~~~~vd~~~~~~l~~~--------~~v~~~Pt~~~~ 111 (140)
T 1v98_A 43 FAQEVAGAPLTLVDFFAPWCGPCRLVSPI-L--EELARDHAGRLKVVKVNVDEHPGLAAR--------YGVRSVPTLVLF 111 (140)
T ss_dssp ------CCCEEEEEEECTTCHHHHHHHHH-H--HHHHHHTTTTEEEEEEETTTCHHHHHH--------TTCCSSSEEEEE
T ss_pred HHHHHHcCCCEEEEEECCCCHHHHHHHHH-H--HHHHHHccCceEEEEEECCCCHHHHHH--------CCCCccCEEEEE
Confidence 4444333333543 4899999999864 3 467777776799999999998776554 578899999988
Q ss_pred CCCCceee
Q 005023 83 SPDLKPLM 90 (718)
Q Consensus 83 ~p~g~p~~ 90 (718)
++|+++.
T Consensus 112 -~~G~~~~ 118 (140)
T 1v98_A 112 -RRGAPVA 118 (140)
T ss_dssp -ETTEEEE
T ss_pred -eCCcEEE
Confidence 7999874
No 106
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=97.90 E-value=4.8e-06 Score=74.48 Aligned_cols=79 Identities=18% Similarity=0.216 Sum_probs=50.4
Q ss_pred hHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEE
Q 005023 4 RSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSV 80 (718)
Q Consensus 4 ~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~v 80 (718)
+.++.+.+++|++++ .+||++|+.|.... .++++..+..++.| |.++..+++.. ...++ -+|+.|+|+.+
T Consensus 20 ~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~l---~~~~~~~~~~v~~~--~~~~~~~~~~~-~~~~~-~~~i~~~Pt~~ 92 (118)
T 1zma_A 20 VRAQEALDKKETATFFIGRKTCPYCRKFAGTL---SGVVAETKAHIYFI--NSEEPSQLNDL-QAFRS-RYGIPTVPGFV 92 (118)
T ss_dssp HHHHHHHHTTCCEEEEEECTTCHHHHHHHHHH---HHHHHHHCCCCEEE--ETTCGGGHHHH-HHHHH-HHTCCSSCEEE
T ss_pred HHHHHHHhCCCeEEEEEECCCCccHHHHHHHH---HHHHHhcCCeEEEE--ECCCcCcHHHH-HHHHH-HcCCCCCCeEE
Confidence 456667778888865 48999999998532 24555444445444 44444444432 11222 26889999999
Q ss_pred EeCCCCceee
Q 005023 81 FLSPDLKPLM 90 (718)
Q Consensus 81 fl~p~g~p~~ 90 (718)
|+ .+|+.+.
T Consensus 93 ~~-~~G~~~~ 101 (118)
T 1zma_A 93 HI-TDGQINV 101 (118)
T ss_dssp EE-ETTEEEE
T ss_pred EE-ECCEEEE
Confidence 98 4898874
No 107
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.88 E-value=2.9e-05 Score=71.40 Aligned_cols=75 Identities=19% Similarity=0.107 Sum_probs=55.1
Q ss_pred cCCcEEE---EcCCchhhhhhccccCcHHHHHHhhc-ccEEEEecCCCCcchHHHHHHHHHHhcCCC------CCCcEEE
Q 005023 12 TRRTHFL---INTCHWCHVMEVESFEDEGVAKLLND-WFVSIKVDREERPDVDKVYMTYVQALYGGG------GWPLSVF 81 (718)
Q Consensus 12 e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~-~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~------GwP~~vf 81 (718)
++|++++ .+||+.|+.|... | .++++.++. ++..++||.++.|++.+. +++. ++|+.+|
T Consensus 25 ~~~~vlv~f~a~wC~~C~~~~p~-~--~~l~~~~~~~~v~~~~vd~~~~~~~~~~--------~~v~~~~~~~~~Pt~~~ 93 (137)
T 2dj0_A 25 KRVTWIVEFFANWSNDCQSFAPI-Y--ADLSLKYNCTGLNFGKVDVGRYTDVSTR--------YKVSTSPLTKQLPTLIL 93 (137)
T ss_dssp TTSCEEEEECCTTCSTTTTTHHH-H--HHHHHHHCSSSCEEEECCTTTCHHHHHH--------TTCCCCSSSSCSSEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHH-H--HHHHHHhCCCCeEEEEEeCccCHHHHHH--------ccCcccCCcCCCCEEEE
Confidence 3457765 3899999999864 3 467777763 799999999998876554 5666 9999999
Q ss_pred eCCCCceeec-ccccCCC
Q 005023 82 LSPDLKPLMG-GTYFPPE 98 (718)
Q Consensus 82 l~p~g~p~~~-~~y~p~~ 98 (718)
+ .+|+++.. .++.+.+
T Consensus 94 ~-~~G~~~~~~~G~~~~~ 110 (137)
T 2dj0_A 94 F-QGGKEAMRRPQIDKKG 110 (137)
T ss_dssp E-SSSSEEEEESCBCSSS
T ss_pred E-ECCEEEEEecCcCchH
Confidence 9 79998742 3445543
No 108
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=97.86 E-value=6e-05 Score=83.66 Aligned_cols=240 Identities=17% Similarity=0.181 Sum_probs=137.6
Q ss_pred CCCcEEEEecCCCCCCCCCcchHHHHHHHHHHHHH---HHHcc-CChHHHHHHHHHHHHHHHhccCCCCceeeec-cCCc
Q 005023 229 VGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLD---AFSLT-KDVFYSYICRDILDYLRRDMIGPGGEIFSAE-DADS 303 (718)
Q Consensus 229 v~GGF~RYsvD~~W~vPHFEKmLyDnA~ll~~ya~---Ay~~t-~~~~y~~~A~~~~~~l~~~m~~p~Ggf~sa~-DADs 303 (718)
+-||+| |..=.+-+---|-|....|++.|.+ +|... +-+..++.++-.++||++ |+.++|+||.-. |.+.
T Consensus 48 l~GGwy----DAGD~~Ky~~p~a~t~~~L~w~~~e~~~~~~~~~~~~d~ldeikwg~D~llk-~~~~~g~~y~qVgd~~~ 122 (433)
T 1ks8_A 48 LTGGYF----DAGDFVKFGFPMAYTATVLAWGLIDFEAGYSSAGALDDGRKAVKWATDYFIK-AHTSQNEFYGQVGQGDA 122 (433)
T ss_dssp CCCSBC----CSSSCCEEHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHH-HCCBTTBEEEEESCHHH
T ss_pred CCCcee----ECCCCCeeccchHHHHHHHHHHHHHhHHhhhcCCchHHHHHHHHHHHHHHHH-hccCCCcEEEEeCCCCc
Confidence 567777 4433444445688888888888877 34433 348899999999999998 777788888743 2211
Q ss_pred ccccCcccccCCceEeechHHHHHHhchhHHHHHHHhcccCCCCcCCCCCCCCCCccCCcceeeccCCchHHHHhcCCCH
Q 005023 304 AETEGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPL 383 (718)
Q Consensus 304 ~~~~~~~~~~EG~yY~Wt~~Ei~~~L~~~~~~~~~~~~v~~~Gn~~~~~~~dp~~~~eg~nvL~~~~~~~~~a~~~g~~~ 383 (718)
+ + ..|..-| + +. ..+.+..+.
T Consensus 123 D-------h-----~~w~~Pe-------~--------------------~~------~~R~~y~~~-------------- 143 (433)
T 1ks8_A 123 D-------H-----AFWGRPE-------D--------------------MT------MARPAYKID-------------- 143 (433)
T ss_dssp H-------H-----TCCSCGG-------G--------------------CC------SCCCEEEEC--------------
T ss_pred C-------C-----cccCCHh-------h--------------------CC------CCCceeecc--------------
Confidence 0 0 0122100 0 00 001111000
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCCchhhhchHHHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHH
Q 005023 384 EKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASF 463 (718)
Q Consensus 384 ~~~~~~l~~~r~~L~~~R~~R~~P~~Ddkilt~WNgl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~ 463 (718)
..+|. |+-.+.+++|||.|++++++- ...| ..++|+.|+++++|
T Consensus 144 --------------------~~~pg------s~~a~~~AAalA~as~vfk~~--D~~y--------A~~~L~~A~~~~~f 187 (433)
T 1ks8_A 144 --------------------TSRPG------SDLAGETAAALAAASIVFRNV--DGTY--------SNNLLTHARQLFDF 187 (433)
T ss_dssp --------------------SSSCC------HHHHHHHHHHHHHHHHHTTTT--CHHH--------HHHHHHHHHHHHHH
T ss_pred --------------------CCCCc------cHHHHHHHHHHHHHHHhcccc--CHHH--------HHHHHHHHHHHHHH
Confidence 01222 334588999999999999751 1111 15789999999999
Q ss_pred HHHhccccCCCeEEEeecCCCC--CCCCCcccHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcccccCCccccCCC
Q 005023 464 IRRHLYDEQTHRLQHSFRNGPS--KAPGFLDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDREGGGYFNTTG 541 (718)
Q Consensus 464 l~~~~~d~~~g~l~~~~~~g~~--~~~~~l~DyA~li~all~LYeaTgd~~~L~~A~~L~~~~~~~F~D~~~Gg~f~t~~ 541 (718)
..++- |.+..+..++.. ...++.| .+++|.++||.+|||+.|++.|++....+.. ....++|.+
T Consensus 188 a~~~~-----~~y~~~~~~~~~~Y~ss~~~D---E~~WAAa~Ly~aTgd~~Yl~~~~~~~~~~~~---~~~~~~~~W--- 253 (433)
T 1ks8_A 188 ANNYR-----GKYSDSITDARNFYASADYRD---ELVWAAAWLYRATNDNTYLNTAESLYDEFGL---QNWGGGLNW--- 253 (433)
T ss_dssp HHHSC-----CCHHHHSGGGGGTSCCCCTHH---HHHHHHHHHHHHHCCHHHHHHHHHHHHHTTG---GGSCCCCCS---
T ss_pred HHHCC-----CcccCCCCcCCCCCCCCCccc---HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCc---CcCcCCcCc---
Confidence 98752 111000000000 1133334 4588999999999999999999986543211 001112222
Q ss_pred CCCccccccccCCCCCCCChHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHhhhhh
Q 005023 542 EDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAGSKSDYYRQNAEHSLAVFETRLKDMAMA 605 (718)
Q Consensus 542 ~~~~l~~r~k~~~D~a~PS~ns~~a~~LlrL~~lt~~~~~~~y~e~a~~~l~~~~~~i~~~p~~ 605 (718)
|+. .+...+.|+.+++. ..|++.++..+..+...+...|.+
T Consensus 254 -------------d~~-------~~g~~~lla~~~~~---~~~~~~~~~~~~~~~~~~~~tp~G 294 (433)
T 1ks8_A 254 -------------DSK-------VSGVQVLLAKLTNK---QAYKDTVQSYVNYLINNQQKTPKG 294 (433)
T ss_dssp -------------SCC-------HHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHTSCBCTTS
T ss_pred -------------cch-------hhHHHHHHhhccCh---HHHHHHHHHHHHHHHhcCCcCCCC
Confidence 111 01123335666664 789988888887776655555554
No 109
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=97.83 E-value=1.1e-05 Score=78.11 Aligned_cols=91 Identities=14% Similarity=0.103 Sum_probs=60.4
Q ss_pred cCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCce
Q 005023 12 TRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKP 88 (718)
Q Consensus 12 e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p 88 (718)
.+|+++. .+||+.|+.|.. .+ .++++. +.++..++||+++.|++...|.. .|+.++|+++|++.+|++
T Consensus 53 ~~k~vvv~F~A~WC~pC~~~~P-~l--~~l~~~-~~~v~~~~v~~d~~~~~~~~~~~-----~~v~~iPt~i~~~~~G~~ 123 (167)
T 1z6n_A 53 ERRYRLLVAGEMWCPDCQINLA-AL--DFAQRL-QPNIELAIISKGRAEDDLRQRLA-----LERIAIPLVLVLDEEFNL 123 (167)
T ss_dssp CSCEEEEEECCTTCHHHHHHHH-HH--HHHHHH-CTTEEEEEECHHHHHHHTTTTTT-----CSSCCSSEEEEECTTCCE
T ss_pred CCCEEEEEEECCCChhHHHHHH-HH--HHHHHH-CCCcEEEEEECCCCHHHHHHHHH-----cCCCCcCeEEEECCCCCE
Confidence 4677655 499999999874 22 123332 34678889999988776554432 357899999999999998
Q ss_pred eecccccCCCCCCCcccHHHHHHHHHHHHh
Q 005023 89 LMGGTYFPPEDKYGRPGFKTILRKVKDAWD 118 (718)
Q Consensus 89 ~~~~~y~p~~~~~~~~~f~~~L~~i~~~w~ 118 (718)
+...+..|. ...+.++.....|.
T Consensus 124 ~~~~g~~p~-------~~~~~i~~~~~~~~ 146 (167)
T 1z6n_A 124 LGRFVERPQ-------AVLDGGPQALAAYK 146 (167)
T ss_dssp EEEEESSCH-------HHHHHCHHHHHHHH
T ss_pred EEEEcCCCH-------HHHHhHHHHHHHHH
Confidence 743333443 35555556666664
No 110
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=97.83 E-value=4.9e-05 Score=70.34 Aligned_cols=81 Identities=11% Similarity=0.054 Sum_probs=50.9
Q ss_pred hhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhh-cccEEEEecCCCCcchHHHHHH---------------HHH
Q 005023 8 GGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLN-DWFVSIKVDREERPDVDKVYMT---------------YVQ 68 (718)
Q Consensus 8 ~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln-~~Fv~vkvD~ee~pd~d~~y~~---------------~~q 68 (718)
.+.-.+|++++ .+||.+|+.+..+. .++.+.+. +++..|.|+.+..++.-..|.+ .+.
T Consensus 25 l~~~~gk~~lv~f~~~~C~~C~~~~~~l---~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 101 (152)
T 2lja_A 25 LADLKGKYIYIDVWATWCGPCRGELPAL---KELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFM 101 (152)
T ss_dssp STTTTTSEEEEEECCSSCCGGGGTHHHH---HHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHH
T ss_pred HHHcCCCEEEEEEECCcCHhHHHHhHHH---HHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHH
Confidence 34446788865 48999999876432 23444443 3467777776665422111111 112
Q ss_pred HhcCCCCCCcEEEeCCCCceeec
Q 005023 69 ALYGGGGWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 69 ~~~g~~GwP~~vfl~p~g~p~~~ 91 (718)
..+|..|+|+++|++++|+.+..
T Consensus 102 ~~~~v~~~P~~~lid~~G~i~~~ 124 (152)
T 2lja_A 102 DAYLINGIPRFILLDRDGKIISA 124 (152)
T ss_dssp HHTTCCSSCCEEEECTTSCEEES
T ss_pred HHcCcCCCCEEEEECCCCeEEEc
Confidence 23688999999999999999874
No 111
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=97.82 E-value=2.7e-05 Score=73.06 Aligned_cols=83 Identities=18% Similarity=0.174 Sum_probs=54.8
Q ss_pred HhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhh-cccEEEEecCCCCcchHHHHHHH--------------H
Q 005023 6 FCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLN-DWFVSIKVDREERPDVDKVYMTY--------------V 67 (718)
Q Consensus 6 ~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln-~~Fv~vkvD~ee~pd~d~~y~~~--------------~ 67 (718)
+..+.-.+|++++ .+||+.|+.|..+. .++.+.+. +++..|.|+.++.++.-..|.+. .
T Consensus 27 ~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l---~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (165)
T 3or5_A 27 FSSASLKGKAYIVNFFATWCPPCRSEIPDM---VQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELI 103 (165)
T ss_dssp EEGGGGTTCEEEEEEECTTSHHHHHHHHHH---HHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHH
T ss_pred echhHcCCCEEEEEEEcCcCHHHHHHHHHH---HHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHH
Confidence 3444556888865 48999999987543 23444444 34778888877766554444321 1
Q ss_pred HHhc-----CCCCCCcEEEeCCCCceeec
Q 005023 68 QALY-----GGGGWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 68 q~~~-----g~~GwP~~vfl~p~g~p~~~ 91 (718)
+.+. |..++|++++++++|+.+..
T Consensus 104 ~~~~~~~~~~i~~~P~~~lid~~G~i~~~ 132 (165)
T 3or5_A 104 RAFNGYIDGGITGIPTSFVIDASGNVSGV 132 (165)
T ss_dssp HHHHTTSTTCSCSSSEEEEECTTSBEEEE
T ss_pred HHHhhhhccCCCCCCeEEEECCCCcEEEE
Confidence 1111 78899999999999999854
No 112
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=97.81 E-value=8.7e-05 Score=84.51 Aligned_cols=90 Identities=13% Similarity=0.163 Sum_probs=63.6
Q ss_pred hchHHHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEeec---CCCCCCCCCc
Q 005023 415 VSWNGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFR---NGPSKAPGFL 491 (718)
Q Consensus 415 t~WNgl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~---~g~~~~~~~l 491 (718)
|++++.+++|||.|++++++- ...| ..++|+.|+++++|+.++... +++.-. .|.-...++.
T Consensus 242 t~~~~~~AAalA~as~vf~~~--D~~y--------A~~~L~~A~~~~~fa~~~~~~-----~~~~~~~~~~~~Y~~~~~~ 306 (537)
T 3gzk_A 242 YAATATFCAAMAHAALVYRPF--DPAL--------SSCCADAARRAYAWLGAHEMQ-----PFHNPDGILTGEYGDAELR 306 (537)
T ss_dssp HHHHHHHHHHHHHHHHHHTTT--CHHH--------HHHHHHHHHHHHHHHHTSCCC-----CCCCCTTCCSCCCCCSCCH
T ss_pred CcHHHHHHHHHHHHHHhhccc--CHHH--------HHHHHHHHHHHHHHHHhcccc-----cccCCcccccCCcCCCccc
Confidence 568999999999999999861 0011 157899999999999886421 111000 0000113555
Q ss_pred ccHHHHHHHHHHHHHHcCChHHHHHHHHHHH
Q 005023 492 DDYAFLISGLLDLYEFGSGTKWLVWAIELQN 522 (718)
Q Consensus 492 ~DyA~li~all~LYeaTgd~~~L~~A~~L~~ 522 (718)
|+ +++|.++||++|+|+.||+.|.++..
T Consensus 307 De---l~wAA~~Ly~aTgd~~Yl~~a~~~~~ 334 (537)
T 3gzk_A 307 DE---LLWASCALLRMTGDSAWARVCEPLLD 334 (537)
T ss_dssp HH---HHHHHHHHHHHHCCGGGHHHHHHHHH
T ss_pred hH---HHHHHHHHHHHhCCHHHHHHHHHhhh
Confidence 55 78999999999999999999998764
No 113
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=97.81 E-value=2.2e-05 Score=74.37 Aligned_cols=92 Identities=9% Similarity=0.116 Sum_probs=56.0
Q ss_pred hcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHH---------------HHHHhcC
Q 005023 11 KTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMT---------------YVQALYG 72 (718)
Q Consensus 11 ~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~---------------~~q~~~g 72 (718)
..+|++++ .+||++|+.|. |.+.++.++++..|.|+.++.++.-..|.+ .....+|
T Consensus 49 ~~gk~vll~F~a~~C~~C~~~~------~~l~~l~~~~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 122 (168)
T 2b1k_A 49 TQGKPVLLNVWATWCPTCRAEH------QYLNQLSAQGIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLG 122 (168)
T ss_dssp CCSSCEEEEEECTTCHHHHHHH------HHHHHHHHTTCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHT
T ss_pred cCCCEEEEEEECCCCHHHHHHH------HHHHHHHHCCCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcC
Confidence 46788765 48999999876 456666665666666665443321111111 0111258
Q ss_pred CCCCCcEEEeCCCCceeec-ccccCCCCCCCcccHHHHHHHHH
Q 005023 73 GGGWPLSVFLSPDLKPLMG-GTYFPPEDKYGRPGFKTILRKVK 114 (718)
Q Consensus 73 ~~GwP~~vfl~p~g~p~~~-~~y~p~~~~~~~~~f~~~L~~i~ 114 (718)
+.|+|++++++++|+++.. .++.+++ .+.+.|+++.
T Consensus 123 v~~~P~~~lid~~G~i~~~~~g~~~~~------~l~~~l~~~l 159 (168)
T 2b1k_A 123 VYGAPETFLIDGNGIIRYRHAGDLNPR------VWEEEIKPLW 159 (168)
T ss_dssp CCSSSEEEEECTTSBEEEEEESCCCHH------HHHHTTHHHH
T ss_pred ccccCEEEEECCCCeEEEEEeCCCCHH------HHHHHHHHHH
Confidence 8899999999999999853 2444432 4555554443
No 114
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=97.80 E-value=2.1e-05 Score=73.26 Aligned_cols=83 Identities=11% Similarity=0.078 Sum_probs=51.3
Q ss_pred HhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHh-hcccEEEEecCCCCcchHHHHH----------------H
Q 005023 6 FCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLL-NDWFVSIKVDREERPDVDKVYM----------------T 65 (718)
Q Consensus 6 ~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~l-n~~Fv~vkvD~ee~pd~d~~y~----------------~ 65 (718)
+..+.-.+|++++ .+||..|+.|..+ + .++.+.+ ++++..|.|+.++.+++.+... .
T Consensus 17 ~~l~~~~gk~vlv~F~a~wC~~C~~~~~~-l--~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (151)
T 3raz_A 17 QSLQSLKAPVRIVNLWATWCGPCRKEMPA-M--SKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSR 93 (151)
T ss_dssp ECGGGCCSSEEEEEEECTTCHHHHHHHHH-H--HHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHH
T ss_pred ecHHHhCCCEEEEEEEcCcCHHHHHHHHH-H--HHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchH
Confidence 3445557888866 4899999998743 1 1222333 3457777777765433322211 0
Q ss_pred HHHHhcC--CCCCCcEEEeCCCCceeec
Q 005023 66 YVQALYG--GGGWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 66 ~~q~~~g--~~GwP~~vfl~p~g~p~~~ 91 (718)
.+...+| ..|+|+++|++++|++...
T Consensus 94 ~~~~~~~~~v~~~P~~~lid~~G~i~~~ 121 (151)
T 3raz_A 94 NFMKTYGNTVGVLPFTVVEAPKCGYRQT 121 (151)
T ss_dssp HHHHTTTCCSCCSSEEEEEETTTTEEEE
T ss_pred HHHHHhCCccCCCCEEEEECCCCcEEEE
Confidence 0112256 7899999999999998754
No 115
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=97.79 E-value=5.6e-05 Score=68.44 Aligned_cols=66 Identities=17% Similarity=0.218 Sum_probs=49.9
Q ss_pred hcCCcEEE---EcCCchhhhhhccccCcHHHHHHh-----hcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEe
Q 005023 11 KTRRTHFL---INTCHWCHVMEVESFEDEGVAKLL-----NDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFL 82 (718)
Q Consensus 11 ~e~K~ii~---y~~C~wChvM~~esf~d~~va~~l-----n~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl 82 (718)
+++|++++ .+||+.|+.|.. .|+ ++++.+ +.+++.++||.++.+++.+. +++.|+|+.+|+
T Consensus 31 ~~~~~vlv~F~a~wC~~C~~~~p-~~~--~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~--------~~v~~~Pt~~~~ 99 (127)
T 3h79_A 31 DPEKDVFVLYYVPWSRHSVAAMR-LWD--DLSMSQSQKRNHLTFVAARIDGEKYPDVIER--------MRVSGFPTMRYY 99 (127)
T ss_dssp CTTCEEEEEEECTTCHHHHHHHH-HHH--HHHHHHHTSTTTTTEEEEEEETTTCHHHHHH--------TTCCSSSEEEEE
T ss_pred CCCCCEEEEEECCccHHHHHHhH-HHH--HHHHHHHhcccCCCeEEEEEEccccHhHHHh--------cCCccCCEEEEE
Confidence 45888876 389999999986 332 344333 35689999999998877655 678999999999
Q ss_pred CCCCc
Q 005023 83 SPDLK 87 (718)
Q Consensus 83 ~p~g~ 87 (718)
.+.++
T Consensus 100 ~~g~~ 104 (127)
T 3h79_A 100 TRIDK 104 (127)
T ss_dssp CSSCS
T ss_pred eCCCC
Confidence 87665
No 116
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=97.79 E-value=4.9e-05 Score=69.53 Aligned_cols=79 Identities=10% Similarity=0.074 Sum_probs=50.4
Q ss_pred HhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcc-----------------------h
Q 005023 6 FCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPD-----------------------V 59 (718)
Q Consensus 6 ~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd-----------------------~ 59 (718)
+..+...+|++++ .+||+.|+.+..+. .++++.+.+.+..|.|+.+..++ -
T Consensus 22 ~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l---~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 98 (148)
T 2b5x_A 22 TREQLIGEKPTLIHFWSISCHLCKEAMPQV---NEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDS 98 (148)
T ss_dssp CHHHHTTTSCEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECS
T ss_pred cchhhcCCCEEEEEEEcCCCHHHHHHhHHH---HHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECC
Confidence 3444556788765 48999999987532 24555555446666666543211 1
Q ss_pred HHHHHHHHHHhcCCCCCCcEEEeCCCCceeec
Q 005023 60 DKVYMTYVQALYGGGGWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 60 d~~y~~~~q~~~g~~GwP~~vfl~p~g~p~~~ 91 (718)
+... ...+|..|+|++++++++|+.+..
T Consensus 99 ~~~~----~~~~~v~~~P~~~lid~~G~i~~~ 126 (148)
T 2b5x_A 99 DHAL----TDAFENEYVPAYYVFDKTGQLRHF 126 (148)
T ss_dssp SCHH----HHHTCCCCSSEEEEECTTCBEEEE
T ss_pred chhH----HHHhCCCCCCEEEEECCCCcEEEE
Confidence 1111 112688999999999999999863
No 117
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=97.77 E-value=2.7e-05 Score=71.37 Aligned_cols=84 Identities=13% Similarity=0.153 Sum_probs=58.9
Q ss_pred hhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhh-cccEEEEecCCCCcchHHHHHHH--------------HHH
Q 005023 8 GGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLN-DWFVSIKVDREERPDVDKVYMTY--------------VQA 69 (718)
Q Consensus 8 ~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln-~~Fv~vkvD~ee~pd~d~~y~~~--------------~q~ 69 (718)
.+.-.+|++++ .+||+.|+.+...--+.+++.+.+. +++..|.|+.++.++.-..|.+. ...
T Consensus 22 l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 101 (142)
T 3ewl_A 22 MSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRT 101 (142)
T ss_dssp GGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHH
T ss_pred hhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhh
Confidence 34446888876 4899999998776666777777765 45777777777655443322210 011
Q ss_pred --hcCCCCCCcEEEeCCCCceeec
Q 005023 70 --LYGGGGWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 70 --~~g~~GwP~~vfl~p~g~p~~~ 91 (718)
.+|+.++|++++++++|+++++
T Consensus 102 ~~~~~v~~~P~~~lid~~G~i~~~ 125 (142)
T 3ewl_A 102 RQLYDIRATPTIYLLDGRKRVILK 125 (142)
T ss_dssp TTCSCCCSSSEEEEECTTCBEEEC
T ss_pred HHHcCCCCCCeEEEECCCCCEEec
Confidence 4788999999999999999874
No 118
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=97.77 E-value=3e-05 Score=70.05 Aligned_cols=79 Identities=15% Similarity=0.155 Sum_probs=50.5
Q ss_pred hhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHH--------------HHHH
Q 005023 7 CGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMT--------------YVQA 69 (718)
Q Consensus 7 ~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~--------------~~q~ 69 (718)
..+...+|++++ .+||..|+.|..+. .++++.+. ++..|.|+.++.++.-..|.+ ....
T Consensus 18 ~l~~~~~k~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 93 (136)
T 1lu4_A 18 DGASLQGKPAVLWFWTPWCPFCNAEAPSL---SQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWA 93 (136)
T ss_dssp EGGGGTTSCEEEEEECTTCHHHHHHHHHH---HHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHH
T ss_pred cHHHhCCCEEEEEEECCcChhHHHHHHHH---HHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHH
Confidence 344456788765 48999999977432 23444444 677777777664322221111 1112
Q ss_pred hcCCCCCCcEEEeCCCCcee
Q 005023 70 LYGGGGWPLSVFLSPDLKPL 89 (718)
Q Consensus 70 ~~g~~GwP~~vfl~p~g~p~ 89 (718)
.+|..++|+++|++++|+..
T Consensus 94 ~~~i~~~P~~~lid~~G~i~ 113 (136)
T 1lu4_A 94 RYNVPWQPAFVFYRADGTST 113 (136)
T ss_dssp HTTCCSSSEEEEECTTSCEE
T ss_pred hcCCCCCCEEEEECCCCcEE
Confidence 36889999999999999987
No 119
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=97.77 E-value=4.7e-05 Score=70.60 Aligned_cols=82 Identities=16% Similarity=0.090 Sum_probs=50.9
Q ss_pred hhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhh-cccEEEEecCCCCcchHHHHHH--------------HHH
Q 005023 7 CGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLN-DWFVSIKVDREERPDVDKVYMT--------------YVQ 68 (718)
Q Consensus 7 ~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln-~~Fv~vkvD~ee~pd~d~~y~~--------------~~q 68 (718)
..+.-.+|++++ ++||.+|+.|.... .++.+.+. +++..|.|+.++.++.-..|.+ .+.
T Consensus 20 ~l~~~~gk~vlv~F~~~~C~~C~~~~~~l---~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 96 (151)
T 2f9s_A 20 ELSDLKGKGVFLNFWGTWCEPCKKEFPYM---ANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVL 96 (151)
T ss_dssp EGGGGTTSEEEEEEECTTCHHHHHHHHHH---HHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHH
T ss_pred EHHHcCCCEEEEEEECCCCHHHHHHHHHH---HHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHH
Confidence 344456788765 48999999987533 22444443 3466666666554422221111 112
Q ss_pred HhcCCCCCCcEEEeCCCCceeec
Q 005023 69 ALYGGGGWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 69 ~~~g~~GwP~~vfl~p~g~p~~~ 91 (718)
..+|..|+|+++|++++|+.+..
T Consensus 97 ~~~~v~~~P~~~lid~~G~i~~~ 119 (151)
T 2f9s_A 97 DAYDVSPLPTTFLINPEGKVVKV 119 (151)
T ss_dssp HHTTCCSSCEEEEECTTSEEEEE
T ss_pred HhcCCCCCCeEEEECCCCcEEEE
Confidence 23688999999999999999864
No 120
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=97.76 E-value=2.6e-05 Score=70.04 Aligned_cols=82 Identities=17% Similarity=0.219 Sum_probs=51.2
Q ss_pred hhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCC-----CcchHHHHHH-------------
Q 005023 7 CGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREE-----RPDVDKVYMT------------- 65 (718)
Q Consensus 7 ~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee-----~pd~d~~y~~------------- 65 (718)
..+.-.+|++++ ++||+.|+.|..+. .++.+..++++..|.|+... .++.-..|.+
T Consensus 16 ~l~~~~gk~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 92 (138)
T 4evm_A 16 RLSDYKGKKVYLKFWASWCSICLASLPDT---DEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDP 92 (138)
T ss_dssp EGGGGTTSEEEEEECCTTCHHHHHHHHHH---HHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECT
T ss_pred EHHHhCCCEEEEEEEcCcCHHHHHHHHHH---HHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECc
Confidence 344456888865 48999999887543 44555556678888884221 1110000000
Q ss_pred --HHHHhcCCCCCCcEEEeCCCCceeec
Q 005023 66 --YVQALYGGGGWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 66 --~~q~~~g~~GwP~~vfl~p~g~p~~~ 91 (718)
.+...+|..|+|++++++++|+.+..
T Consensus 93 ~~~~~~~~~v~~~P~~~lid~~G~i~~~ 120 (138)
T 4evm_A 93 SGKLLETYGVRSYPTQAFIDKEGKLVKT 120 (138)
T ss_dssp TCHHHHHTTCCSSSEEEEECTTCCEEEE
T ss_pred chHHHHHcCcccCCeEEEECCCCcEEEe
Confidence 01123688999999999999998854
No 121
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=97.76 E-value=3.6e-05 Score=77.16 Aligned_cols=76 Identities=20% Similarity=0.279 Sum_probs=58.4
Q ss_pred hhHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcc---cEEEEecCCCCcchHHHHHHHHHHhcCCCCC
Q 005023 3 RRSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDW---FVSIKVDREERPDVDKVYMTYVQALYGGGGW 76 (718)
Q Consensus 3 ~~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~---Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~Gw 76 (718)
.+.++.+.+++|++++ .+||+.|+.|...- .++++.+... ++.++||.++.+++.+. +|+.|+
T Consensus 22 ~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~---~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~--------~~v~~~ 90 (241)
T 3idv_A 22 DANFDNFVADKDTVLLEFYAPWCGHCKQFAPEY---EKIANILKDKDPPIPVAKIDATSASVLASR--------FDVSGY 90 (241)
T ss_dssp TTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHH---HHHHHHHHTSSSCCCEEEEETTTCHHHHHH--------TTCCSS
T ss_pred ccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHH---HHHHHHHhhcCCceEEEEEeccCCHHHHHh--------cCCCcC
Confidence 3456777888999876 38999999998643 4556666544 89999999998776554 688999
Q ss_pred CcEEEeCCCCceee
Q 005023 77 PLSVFLSPDLKPLM 90 (718)
Q Consensus 77 P~~vfl~p~g~p~~ 90 (718)
|+.+|+. +|+++.
T Consensus 91 Pt~~~~~-~g~~~~ 103 (241)
T 3idv_A 91 PTIKILK-KGQAVD 103 (241)
T ss_dssp SEEEEEE-TTEEEE
T ss_pred CEEEEEc-CCCccc
Confidence 9999985 677773
No 122
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=97.75 E-value=1.5e-05 Score=74.86 Aligned_cols=79 Identities=9% Similarity=0.048 Sum_probs=56.3
Q ss_pred HhhhhhcCCcEEEEcCCchh-----hhhhccccCcHHHHHHhhcc-cEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcE
Q 005023 6 FCGGTKTRRTHFLINTCHWC-----HVMEVESFEDEGVAKLLNDW-FVSIKVDREERPDVDKVYMTYVQALYGGGGWPLS 79 (718)
Q Consensus 6 ~~~Ak~e~K~ii~y~~C~wC-----hvM~~esf~d~~va~~ln~~-Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~ 79 (718)
+++--+.++++++..||.|| +.|.- ++ +++++.+... +..+|||.|+.|++... +|+.|+||.
T Consensus 27 F~~~v~~~~~vlVdF~a~~crCgpCk~iaP-vl--eela~e~~g~~v~~~KVdvDe~~~lA~~--------ygV~sIPTl 95 (140)
T 2qgv_A 27 LDDWLTQAPDGVVLLSSDPKRTPEVSDNPV-MI--GELLHEFPDYTWQVAIADLEQSEAIGDR--------FGAFRFPAT 95 (140)
T ss_dssp HHHHHHTCSSEEEEECCCTTTCTTTTHHHH-HH--HHHHTTCTTSCCEEEECCHHHHHHHHHH--------HTCCSSSEE
T ss_pred HHHHHhCCCCEEEEEeCCcccCCcHHHHHh-HH--HHHHHHcCCCeEEEEEEECCCCHHHHHH--------cCCccCCEE
Confidence 34333577888887656664 46764 22 4455555545 88999999999998887 688999999
Q ss_pred EEeCCCCceeec-ccccC
Q 005023 80 VFLSPDLKPLMG-GTYFP 96 (718)
Q Consensus 80 vfl~p~g~p~~~-~~y~p 96 (718)
+|+. +|+++.. .+..|
T Consensus 96 ilFk-~G~~v~~~~G~~~ 112 (140)
T 2qgv_A 96 LVFT-GGNYRGVLNGIHP 112 (140)
T ss_dssp EEEE-TTEEEEEEESCCC
T ss_pred EEEE-CCEEEEEEecCCC
Confidence 9885 9999864 35455
No 123
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=97.74 E-value=0.0013 Score=72.43 Aligned_cols=274 Identities=12% Similarity=0.115 Sum_probs=149.7
Q ss_pred HHH-HHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHhccCCCCceeeeccCCcccccCcccccCCceEeechHHHHHHh
Q 005023 251 LYD-QGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMIGPGGEIFSAEDADSAETEGATRKKEGAFYVWTSKEVEDIL 329 (718)
Q Consensus 251 LyD-nA~ll~~ya~Ay~~t~~~~y~~~A~~~~~~l~~~m~~p~Ggf~sa~DADs~~~~~~~~~~EG~yY~Wt~~Ei~~~L 329 (718)
||+ .+-++..|+..|++|+|+.|++.|.++++.+.+.+.+..-+|+. |.-|..|+ ...+...+
T Consensus 73 lY~G~~Gia~~l~~l~~~t~d~~yl~~a~~~l~~~~~~l~~~~~~~~~--------------G~aG~l~~--l~~ly~~~ 136 (411)
T 3e6u_A 73 GYTGWAGIAVLYLHLYDVFGDPAYLQLAHGYVKQSLNCLTKRSITFLC--------------GDAGPLAV--AAVLYHKM 136 (411)
T ss_dssp SSSSHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCCSCCCCTTT--------------STHHHHHH--HHHHHHHT
T ss_pred eeeChHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccCCcccc--------------CcHHHHHH--HHHHHHHh
Confidence 444 67789999999999999999999999999998877543323332 23344443 33344455
Q ss_pred chh--H-HHHHHHhcc---cCCCCcCCCCCCCCCCccCCcc-eeeccCCchHHHHhcC---CCHHHHHHHHHHHHHHHHh
Q 005023 330 GEH--A-ILFKEHYYL---KPTGNCDLSRMSDPHNEFKGKN-VLIELNDSSASASKLG---MPLEKYLNILGECRRKLFD 399 (718)
Q Consensus 330 ~~~--~-~~~~~~~~v---~~~Gn~~~~~~~dp~~~~eg~n-vL~~~~~~~~~a~~~g---~~~~~~~~~l~~~r~~L~~ 399 (718)
+++ + +++.+.-.+ ..+.+ ...+.|.. ++.. +-.+.+..+ +....+.+..+.+.+....
T Consensus 137 g~~~~a~~~~~~l~~~~~~~~~~~---------~dll~G~AG~l~a---Ll~L~~~~~~~~~~~~~i~~i~~~ii~~g~~ 204 (411)
T 3e6u_A 137 NNEKQAEDCITRLIHLNKIDPHAP---------NEMLYGRIGYIYA---LLFVNKNFGVEKIPQSHIQQICETILTSGEN 204 (411)
T ss_dssp TCHHHHHHHHHHHHGGGGGCTTCC---------SSTTTSHHHHHHH---HHHHHHHHSSCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcccccCC---------hhhhcCcHHHHHH---HHHHHHHcCCccchHHHHHHHHHHHHHHHHH
Confidence 532 1 122222221 11111 11122321 0100 001111111 1111122222222111110
Q ss_pred -hhccC---CCCC---CCchhhhch-HHH--HHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhcc
Q 005023 400 -VRSKR---PRPH---LDDKVIVSW-NGL--VISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLY 469 (718)
Q Consensus 400 -~R~~R---~~P~---~Ddkilt~W-Ngl--~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~ 469 (718)
.+..+ ..|. ..++..++| .|. ++.+|+++++.+++ +++++.++++.+++.+...
T Consensus 205 ~~~~~~~~~~~pl~~~w~~~~~~G~aHG~aGI~~~Ll~~~~~~~~----------------~~~~~~i~~~l~~l~~~~~ 268 (411)
T 3e6u_A 205 LARKRNFTAKSPLMYEWYQEYYVGAAHGLAGIYYYLMQPSLQVSQ----------------GKLHSLVKPSVDYVCQLKF 268 (411)
T ss_dssp HHHHTTTTTTCSCCCCBTTBCBCSTTTSHHHHHHHHTCGGGCCCH----------------HHHHHTHHHHHHHHHHTCC
T ss_pred HHHhccccCCCCcceeecCccCCcccccHHHHHHHHHHHHhhcCh----------------HHHHHHHHHHHHHHHHhhc
Confidence 11111 2221 012222222 111 36678888777776 7899999999999998765
Q ss_pred ccCCCeEEEeecCCCCCCCCCcccHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcccccCCccccCCCCCCccccc
Q 005023 470 DEQTHRLQHSFRNGPSKAPGFLDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLR 549 (718)
Q Consensus 470 d~~~g~l~~~~~~g~~~~~~~l~DyA~li~all~LYeaTgd~~~L~~A~~L~~~~~~~F~D~~~Gg~f~t~~~~~~l~~r 549 (718)
. +|.+..+..++......+...-+=.+.+++.++++++|++|++.|++..+.+.+. | +.. .
T Consensus 269 ~--~g~wp~~~~~~~~~~~~wChG~~Gi~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~------g-~~~---~------- 329 (411)
T 3e6u_A 269 P--SGNYPPCIGDNRDLLVHWCHGAPGVIYMLIQAYKVFREEKYLCDAYQCADVIWQY------G-LLK---K------- 329 (411)
T ss_dssp T--TSCCCSBTTCCCCCCCSSSSSHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH------C-SBT---T-------
T ss_pred c--CCCCCCCCCcccCccccccCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc------C-ccC---C-------
Confidence 3 2422111111222233556667778899999999999999999999988766542 1 100 0
Q ss_pred cccCCCCCCCChHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHH
Q 005023 550 VKEDHDGAEPSGNSVSVINLVRLASIVAGSKSDYYRQNAEHSLAVF 595 (718)
Q Consensus 550 ~k~~~D~a~PS~ns~~a~~LlrL~~lt~~~~~~~y~e~a~~~l~~~ 595 (718)
+...=-|.+=.+..|+++++.|++ +.|+++|.+++...
T Consensus 330 -----~~~lChG~aG~~~~ll~~~~~t~~---~~~~~~A~~~~~~~ 367 (411)
T 3e6u_A 330 -----GYGLCHGSAGNAYAFLTLYNLTQD---MKYLYRACKFAEWC 367 (411)
T ss_dssp -----CSCSTTSHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHH
T ss_pred -----CCceecChHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHH
Confidence 112233556667789999999986 89999998776653
No 124
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=97.73 E-value=0.00013 Score=67.40 Aligned_cols=89 Identities=18% Similarity=0.240 Sum_probs=55.3
Q ss_pred HhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhc-ccEEEEecCCCCcchHHHHHH--------------HH
Q 005023 6 FCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLND-WFVSIKVDREERPDVDKVYMT--------------YV 67 (718)
Q Consensus 6 ~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~-~Fv~vkvD~ee~pd~d~~y~~--------------~~ 67 (718)
+..+...+|++++ .+||..|+.|... + .++.+.+.+ ++..|.|+.+..+.....+.+ .+
T Consensus 21 ~~l~~~~gk~vll~f~~~~C~~C~~~~~~-l--~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~ 97 (152)
T 3gl3_A 21 VKLSDKTGSVVYLDFWASWCGPCRQSFPW-M--NQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQT 97 (152)
T ss_dssp EEGGGGTTSEEEEEEECTTCTHHHHHHHH-H--HHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHH
T ss_pred EeHHHhCCCEEEEEEECCcCHHHHHHHHH-H--HHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchh
Confidence 3445567888865 4899999988754 2 334444433 366666666654432222211 12
Q ss_pred HHhcCCCCCCcEEEeCCCCceeecc-cccCC
Q 005023 68 QALYGGGGWPLSVFLSPDLKPLMGG-TYFPP 97 (718)
Q Consensus 68 q~~~g~~GwP~~vfl~p~g~p~~~~-~y~p~ 97 (718)
...+|..++|++++++++|+.+... ++.+.
T Consensus 98 ~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~ 128 (152)
T 3gl3_A 98 PRLYGVKGMPTSFLIDRNGKVLLQHVGFRPA 128 (152)
T ss_dssp HHHTTCCSSSEEEEECTTSBEEEEEESCCTT
T ss_pred HHHcCCCCCCeEEEECCCCCEEEEEccCCCc
Confidence 2237889999999999999998643 45543
No 125
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=97.72 E-value=5.1e-05 Score=68.26 Aligned_cols=79 Identities=16% Similarity=0.108 Sum_probs=48.7
Q ss_pred hhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHH---------------HHH
Q 005023 7 CGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMT---------------YVQ 68 (718)
Q Consensus 7 ~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~---------------~~q 68 (718)
..+...+|++++ .+||+.|+.+..+. .++.+.+. ++..|.|+.++.++.-..+.+ ...
T Consensus 19 ~l~~~~~k~~ll~f~~~~C~~C~~~~~~l---~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 94 (136)
T 1zzo_A 19 HGESLLGKPAVLWFWAPWCPTCQGEAPVV---GQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVW 94 (136)
T ss_dssp EGGGGTTSCEEEEEECTTCHHHHHHHHHH---HHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHH
T ss_pred eHHHhCCCeEEEEEEcCCChhHHHHHHHH---HHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHH
Confidence 344456788755 48999999987432 23444444 566777776553221111110 011
Q ss_pred HhcCCCCCCcEEEeCCCCcee
Q 005023 69 ALYGGGGWPLSVFLSPDLKPL 89 (718)
Q Consensus 69 ~~~g~~GwP~~vfl~p~g~p~ 89 (718)
..+|..|+|++++++++|+++
T Consensus 95 ~~~~i~~~P~~~~id~~g~i~ 115 (136)
T 1zzo_A 95 ANFGVTQQPAYAFVDPHGNVD 115 (136)
T ss_dssp HHTTCCSSSEEEEECTTCCEE
T ss_pred HHcCCCCCceEEEECCCCCEE
Confidence 126889999999999999987
No 126
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=97.71 E-value=0.00029 Score=78.38 Aligned_cols=182 Identities=14% Similarity=0.120 Sum_probs=110.8
Q ss_pred cCCCcEEEEecCCCCCCCCCcchHHHHHHHHHHHHHH---HHccC-ChHHHHHHHHHHHHHHHhccCCCCceeeec-cCC
Q 005023 228 HVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDA---FSLTK-DVFYSYICRDILDYLRRDMIGPGGEIFSAE-DAD 302 (718)
Q Consensus 228 ~v~GGF~RYsvD~~W~vPHFEKmLyDnA~ll~~ya~A---y~~t~-~~~y~~~A~~~~~~l~~~m~~p~Ggf~sa~-DAD 302 (718)
.+-||+| |..=.+-+---|-|....|++.|.+. |..++ -+..++.++-.++||++ |....|+||.-. |.+
T Consensus 49 Dl~GGwy----DAGD~~Ky~~p~a~t~~~L~w~~~e~~~~~~~~g~~~d~ldeikwg~D~llk-~~~~~~~~y~qVgd~~ 123 (441)
T 1ia6_A 49 DLTGGYH----DAGDHVKFGLPQGYSAAILGWSLYEFKESFDATGNTTKMLQQLKYFTDYFLK-SHPNSTTFYYQVGEGN 123 (441)
T ss_dssp CCCCSBC----CSSSCCEEHHHHHHHHHHHHHHHHHCHHHHHHTTCHHHHHHHHHHHHHHHHH-TCCSTTCEEEEESCHH
T ss_pred cCCCCee----eCCCCCeeccchHHHHHHHHHHHHHhHHHHhhcCcHHHHHHHHHHHHHHHHH-hccCCCcEEEEeCCCC
Confidence 4668887 54334444456888888899888774 54444 48889999999999998 554457787743 222
Q ss_pred cccccCcccccCCceEeechHHHHHHhchhHHHHHHHhcccCCCCcCCCCCCCCCCccCCcceeeccCCchHHHHhcCCC
Q 005023 303 SAETEGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMP 382 (718)
Q Consensus 303 s~~~~~~~~~~EG~yY~Wt~~Ei~~~L~~~~~~~~~~~~v~~~Gn~~~~~~~dp~~~~eg~nvL~~~~~~~~~a~~~g~~ 382 (718)
++ . ..|..-|. | +
T Consensus 124 ~D----------h--~~w~~Pe~---------------------------~-------~--------------------- 136 (441)
T 1ia6_A 124 AD----------H--TYWGAPEE---------------------------Q-------T--------------------- 136 (441)
T ss_dssp HH----------T--TCCSCGGG---------------------------C-------C---------------------
T ss_pred cc----------c--cccCChhh---------------------------C-------C---------------------
Confidence 11 0 01221100 0 0
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCC-CC-chhhhchHHHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHH
Q 005023 383 LEKYLNILGECRRKLFDVRSKRPRPH-LD-DKVIVSWNGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESA 460 (718)
Q Consensus 383 ~~~~~~~l~~~r~~L~~~R~~R~~P~-~D-dkilt~WNgl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~ 460 (718)
..|+.++ ++ ..--|+..+.+++|||.|++++++- ...| ..++|+.|+++
T Consensus 137 -------------------~~R~~~y~~~~~~p~sd~a~~~AAalAaas~vfk~~--D~~y--------A~~~L~~A~~~ 187 (441)
T 1ia6_A 137 -------------------GQRPSLYKADPSSPASDILSETSAALTLMYLNYKNI--DSAY--------ATKCLNAAKEL 187 (441)
T ss_dssp -------------------SCCCCCEEEBTTBCCHHHHHHHHHHHHHHHHHHTTT--CHHH--------HHHHHHHHHHH
T ss_pred -------------------CCCceeeEeCCCCCccHHHHHHHHHHHHHHHhcccc--CHHH--------HHHHHHHHHHH
Confidence 0011100 00 0112455689999999999999751 1111 15789999999
Q ss_pred HHHHHHhccccCCCeEEEeecCCCCCCCCCcccHHHHHHHHHHHHHHcCChHHHHHHHHHH
Q 005023 461 ASFIRRHLYDEQTHRLQHSFRNGPSKAPGFLDDYAFLISGLLDLYEFGSGTKWLVWAIELQ 521 (718)
Q Consensus 461 ~~~l~~~~~d~~~g~l~~~~~~g~~~~~~~l~DyA~li~all~LYeaTgd~~~L~~A~~L~ 521 (718)
++|..++--....+.+| ...++.| .+++|.++||.+|||..|++.|.+..
T Consensus 188 ~~fa~~~~g~~~~~~~Y--------~ss~~~D---E~~WAAa~Ly~aTgd~~Yl~~a~~~~ 237 (441)
T 1ia6_A 188 YAMGKANQGVGNGQSFY--------QATSFGD---DLAWAATWLYTATNDSTYITDAEQFI 237 (441)
T ss_dssp HHHHHHSCSCCCCTTTS--------CCCCSHH---HHHHHHHHHHHHHCCTHHHHHHHHHT
T ss_pred HHHHHHcCCCCCCCCCC--------CCCCchh---HHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99998763111111111 1134444 45689999999999999999998754
No 127
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=97.71 E-value=4.1e-05 Score=69.29 Aligned_cols=75 Identities=17% Similarity=0.110 Sum_probs=50.9
Q ss_pred HHhhhhhc--CCcEEE---Ec-------CCchhhhhhccccCcHHHHHHhhcccEEEEecC-------CCCcchHHHHHH
Q 005023 5 SFCGGTKT--RRTHFL---IN-------TCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDR-------EERPDVDKVYMT 65 (718)
Q Consensus 5 a~~~Ak~e--~K~ii~---y~-------~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~-------ee~pd~d~~y~~ 65 (718)
.+.+..++ +|++++ .+ ||+.|+.|.... .++++.+.++++.++||. ++.+++.+.
T Consensus 14 ~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l---~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~~~--- 87 (123)
T 1wou_A 14 EFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVV---REGLKHISEGCVFIYCQVGEKPYWKDPNNDFRKN--- 87 (123)
T ss_dssp HHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHH---HHHGGGCCTTEEEEEEECCCHHHHHCTTCHHHHH---
T ss_pred HHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHH---HHHHHHcCCCcEEEEEECCCchhhhchhHHHHHH---
Confidence 34444443 888865 37 999999998532 334444444789999999 555554443
Q ss_pred HHHHhcCCCCCCcEEEeCCCCceeec
Q 005023 66 YVQALYGGGGWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 66 ~~q~~~g~~GwP~~vfl~p~g~p~~~ 91 (718)
+++.|.|+.+|+.. +..+.+
T Consensus 88 -----~~i~~~Pt~~~~~~-~~~~~g 107 (123)
T 1wou_A 88 -----LKVTAVPTLLKYGT-PQKLVE 107 (123)
T ss_dssp -----HCCCSSSEEEETTS-SCEEEG
T ss_pred -----CCCCeeCEEEEEcC-CceEec
Confidence 68899999999987 555543
No 128
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=97.68 E-value=7.8e-05 Score=69.12 Aligned_cols=101 Identities=14% Similarity=0.087 Sum_probs=58.6
Q ss_pred HhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhc-ccEEEEecCCCC-cchHHHHHHH--------------
Q 005023 6 FCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLND-WFVSIKVDREER-PDVDKVYMTY-------------- 66 (718)
Q Consensus 6 ~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~-~Fv~vkvD~ee~-pd~d~~y~~~-------------- 66 (718)
+..+.-.+|++++ ++||..|+.|.... .++.+.+.+ ++..|.|+.+.. ++.-..|.+.
T Consensus 21 ~~l~~~~gk~vll~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 97 (154)
T 3kcm_A 21 VKLSDLKGQVVIVNFWATWCPPCREEIPSM---MRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKR 97 (154)
T ss_dssp EEGGGGTTSEEEEEEECTTCHHHHHHHHHH---HHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCH
T ss_pred EehhhcCCCEEEEEEECCCCHHHHHHHHHH---HHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchH
Confidence 3444557888865 59999999987543 334444443 455555555543 2211111110
Q ss_pred HHHhcCCCCCCcEEEeCCCCceeecc-cccCCCCCCCcccHHHHHHHH
Q 005023 67 VQALYGGGGWPLSVFLSPDLKPLMGG-TYFPPEDKYGRPGFKTILRKV 113 (718)
Q Consensus 67 ~q~~~g~~GwP~~vfl~p~g~p~~~~-~y~p~~~~~~~~~f~~~L~~i 113 (718)
+...+|..++|++++++++|+.+... ++.+.. .+.+.+.|+++
T Consensus 98 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~----~~~l~~~l~~l 141 (154)
T 3kcm_A 98 VGKLYGTTGVPETFVIDRHGVILKKVVGAMEWD----HPEVIAFLNNE 141 (154)
T ss_dssp HHHHHTCCSBCEEEEECTTSBEEEEEESCCCTT----SHHHHHHHHTC
T ss_pred HHHHhCCCCCCeEEEECCCCcEEEEEcCCCccc----cHHHHHHHHHH
Confidence 12236889999999999999998642 333322 33555555544
No 129
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=97.67 E-value=8.5e-05 Score=71.51 Aligned_cols=86 Identities=9% Similarity=0.064 Sum_probs=56.8
Q ss_pred HHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHH---------------
Q 005023 5 SFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTY--------------- 66 (718)
Q Consensus 5 a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~--------------- 66 (718)
.+..+.-.+|++++ .+||..|+.+. |.+.++.++++..|.|+.++.++.-..|.+.
T Consensus 50 ~~~l~~~~gk~vll~F~a~~C~~C~~~~------~~l~~l~~~~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~ 123 (176)
T 3kh7_A 50 RLTEADLKGKPALVNVWGTWCPSCRVEH------PELTRLAEQGVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGT 123 (176)
T ss_dssp EEEGGGGCSSCEEEEEECTTCHHHHHHH------HHHHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCH
T ss_pred eecHHHhCCCEEEEEEECCcCHHHHHHH------HHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcch
Confidence 34555666898866 48999998874 6677777777777777755444322222111
Q ss_pred HHHhcCCCCCCcEEEeCCCCceeecc-cccC
Q 005023 67 VQALYGGGGWPLSVFLSPDLKPLMGG-TYFP 96 (718)
Q Consensus 67 ~q~~~g~~GwP~~vfl~p~g~p~~~~-~y~p 96 (718)
+...+|..++|++++++++|+.++.. ++.+
T Consensus 124 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~ 154 (176)
T 3kh7_A 124 LGLDLGVYGAPETYLIDKQGIIRHKIVGVVD 154 (176)
T ss_dssp HHHHHTCCSSCEEEEECTTCBEEEEEESCCC
T ss_pred HHHHcCCCCCCeEEEECCCCeEEEEEcCCCC
Confidence 11125788999999999999998643 4444
No 130
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=97.66 E-value=7.1e-05 Score=74.50 Aligned_cols=75 Identities=15% Similarity=0.093 Sum_probs=55.1
Q ss_pred hHHhhhhhcCCcE-EE---EcCCchhhhhhccccCcHHHHHHhh----cccEEEEecCCCCcchHHHHHHHHHHhcCCCC
Q 005023 4 RSFCGGTKTRRTH-FL---INTCHWCHVMEVESFEDEGVAKLLN----DWFVSIKVDREERPDVDKVYMTYVQALYGGGG 75 (718)
Q Consensus 4 ~a~~~Ak~e~K~i-i~---y~~C~wChvM~~esf~d~~va~~ln----~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~G 75 (718)
+.++..++.++++ ++ .+||++|+.|.... .++++.+. .++..++||.++.+++.+. +|+.|
T Consensus 124 ~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~---~~l~~~~~~~~~~~v~~~~vd~~~~~~l~~~--------~~v~~ 192 (226)
T 1a8l_A 124 ETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMA---HKFAIENTKAGKGKILGDMVEAIEYPEWADQ--------YNVMA 192 (226)
T ss_dssp HHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHH---HHHHHHHHHTTCCCEEEEEEEGGGCHHHHHH--------TTCCS
T ss_pred HHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHH---HHHHHhcccccCCcEEEEEEEcccCHHHHHh--------CCCcc
Confidence 3445555566666 44 48999999998543 45666665 4799999999998876654 68899
Q ss_pred CCcEEEeCCCCceee
Q 005023 76 WPLSVFLSPDLKPLM 90 (718)
Q Consensus 76 wP~~vfl~p~g~p~~ 90 (718)
+|+.+|+ ++|+...
T Consensus 193 ~Pt~~~~-~~G~~~~ 206 (226)
T 1a8l_A 193 VPKIVIQ-VNGEDRV 206 (226)
T ss_dssp SCEEEEE-ETTEEEE
T ss_pred cCeEEEE-eCCceeE
Confidence 9998777 5898764
No 131
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=97.64 E-value=0.00012 Score=67.93 Aligned_cols=82 Identities=12% Similarity=0.182 Sum_probs=51.4
Q ss_pred hHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhc-ccEEEEecCCCCcchHHHHHH--------------
Q 005023 4 RSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLND-WFVSIKVDREERPDVDKVYMT-------------- 65 (718)
Q Consensus 4 ~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~-~Fv~vkvD~ee~pd~d~~y~~-------------- 65 (718)
+.+..+.-.+|++++ .+||++|+.|. |.+.++.++ ++..|.|+.++.++.-..|.+
T Consensus 33 ~~~~l~~~~gk~~ll~f~~~~C~~C~~~~------~~l~~l~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 106 (156)
T 1kng_A 33 PGLDPAAFKGKVSLVNVWASWCVPCHDEA------PLLTELGKDKRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDAN 106 (156)
T ss_dssp CCBCGGGGTTSCEEEEEECTTCHHHHHHH------HHHHHHTTCTTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETT
T ss_pred ceechHHhCCCEEEEEEEcccCHhHHHHH------HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCch
Confidence 345555566888765 48999999876 344555443 366666665544322221110
Q ss_pred -HHHHhcCCCCCCcEEEeCCCCceeec
Q 005023 66 -YVQALYGGGGWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 66 -~~q~~~g~~GwP~~vfl~p~g~p~~~ 91 (718)
.+...+|..++|++++++++|+++..
T Consensus 107 ~~~~~~~~v~~~P~~~~id~~G~i~~~ 133 (156)
T 1kng_A 107 GRASIEWGVYGVPETFVVGREGTIVYK 133 (156)
T ss_dssp SHHHHHTTCCSSCEEEEECTTSBEEEE
T ss_pred hHHHHhcCcCccCeEEEEcCCCCEEEE
Confidence 01123688899999999999999863
No 132
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=97.63 E-value=2.5e-05 Score=73.35 Aligned_cols=21 Identities=10% Similarity=-0.073 Sum_probs=18.7
Q ss_pred cCCCCCCcEEEeCCCCceeec
Q 005023 71 YGGGGWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 71 ~g~~GwP~~vfl~p~g~p~~~ 91 (718)
+|+.|+|+++|++++|+.+..
T Consensus 117 ~~v~~~P~~~lid~~G~i~~~ 137 (164)
T 2h30_A 117 LNISVYPSWALIGKDGDVQRI 137 (164)
T ss_dssp TTCCSSSEEEEECTTSCEEEE
T ss_pred cCCCccceEEEECCCCcEEEE
Confidence 688899999999999998863
No 133
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=97.60 E-value=4.8e-05 Score=62.25 Aligned_cols=61 Identities=16% Similarity=0.021 Sum_probs=45.4
Q ss_pred EEEcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCceeeccccc
Q 005023 17 FLINTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLMGGTYF 95 (718)
Q Consensus 17 i~y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p~~~~~y~ 95 (718)
|-.+||+.|+.|.... .++++.++.++..++|| .+++.+. +|+.|+|+++| +|+++.. ++.
T Consensus 6 f~a~wC~~C~~~~~~l---~~~~~~~~~~~~~~~v~---~~~~~~~--------~~v~~~Pt~~~---~G~~~~~-G~~ 66 (77)
T 1ilo_A 6 IYGTGCANCQMLEKNA---REAVKELGIDAEFEKIK---EMDQILE--------AGLTALPGLAV---DGELKIM-GRV 66 (77)
T ss_dssp EECSSSSTTHHHHHHH---HHHHHHTTCCEEEEEEC---SHHHHHH--------HTCSSSSCEEE---TTEEEEC-SSC
T ss_pred EEcCCChhHHHHHHHH---HHHHHHcCCceEEEEec---CHHHHHH--------CCCCcCCEEEE---CCEEEEc-CCC
Confidence 4458999999998644 56777777788889998 3333322 68899999998 8998765 444
No 134
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=97.59 E-value=0.0001 Score=69.16 Aligned_cols=80 Identities=13% Similarity=0.123 Sum_probs=53.2
Q ss_pred hhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhh-cccEEEEecCCC-------------------CcchHHHHH
Q 005023 8 GGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLN-DWFVSIKVDREE-------------------RPDVDKVYM 64 (718)
Q Consensus 8 ~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln-~~Fv~vkvD~ee-------------------~pd~d~~y~ 64 (718)
.+.-++|++++ .+||..|+.+.... .++.+.+. .+++.|.|+.++ ...+.+
T Consensus 36 l~~~~gk~vll~F~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~--- 109 (158)
T 3hdc_A 36 LAQYRGKIVLVNFWASWCPYCRDEMPSM---DRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQ--- 109 (158)
T ss_dssp SGGGTTSEEEEEEECTTCHHHHHHHHHH---HHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHH---
T ss_pred hHHhCCCEEEEEEECCcCHHHHHHHHHH---HHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHH---
Confidence 34456788765 48999999877532 33444443 467777777665 222222
Q ss_pred HHHHHhcCCCCCCcEEEeCCCCceeec-ccccCCC
Q 005023 65 TYVQALYGGGGWPLSVFLSPDLKPLMG-GTYFPPE 98 (718)
Q Consensus 65 ~~~q~~~g~~GwP~~vfl~p~g~p~~~-~~y~p~~ 98 (718)
.+|..++|+++|++++|+++.. .++.+.+
T Consensus 110 -----~~~v~~~P~~~lid~~G~i~~~~~G~~~~~ 139 (158)
T 3hdc_A 110 -----RYGANRLPDTFIVDRKGIIRQRVTGGIEWD 139 (158)
T ss_dssp -----HTTCCSSSEEEEECTTSBEEEEEESCCCTT
T ss_pred -----HhCCCCcceEEEEcCCCCEEEEEeCCCccc
Confidence 2688999999999999999864 3555543
No 135
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=97.58 E-value=0.00019 Score=66.68 Aligned_cols=80 Identities=18% Similarity=0.237 Sum_probs=50.1
Q ss_pred hhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhc-ccEEEEecCCCCcchHHHHH-----------------HHH
Q 005023 9 GTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLND-WFVSIKVDREERPDVDKVYM-----------------TYV 67 (718)
Q Consensus 9 Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~-~Fv~vkvD~ee~pd~d~~y~-----------------~~~ 67 (718)
+.-.+|++++ ++||..|+.+..+. .++.+.+.+ ++..|.|+.++.++--..|. ..+
T Consensus 25 ~~~~gk~vll~F~a~~C~~C~~~~~~l---~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 101 (152)
T 2lrn_A 25 NDFKGKYVLVDFWFAGCSWCRKETPYL---LKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDV 101 (152)
T ss_dssp GGGTTSEEEEEEECTTCTTHHHHHHHH---HHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHH
T ss_pred HHcCCCEEEEEEECCCChhHHHHHHHH---HHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHH
Confidence 3346788765 58999999876532 234444443 46666776665432211111 111
Q ss_pred HHhcCCCCCCcEEEeCCCCceeec
Q 005023 68 QALYGGGGWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 68 q~~~g~~GwP~~vfl~p~g~p~~~ 91 (718)
...+|..++|++++++++|+.+..
T Consensus 102 ~~~~~v~~~P~~~lid~~G~i~~~ 125 (152)
T 2lrn_A 102 LESYCIVGFPHIILVDPEGKIVAK 125 (152)
T ss_dssp HHHTTCCSSCEEEEECTTSEEEEE
T ss_pred HHHhCCCcCCeEEEECCCCeEEEe
Confidence 223688999999999999999865
No 136
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=97.57 E-value=6.1e-05 Score=69.26 Aligned_cols=83 Identities=14% Similarity=0.034 Sum_probs=50.3
Q ss_pred HHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcc-cEEEEecCCCCcchHH--HHHHHHHHhcCCCCCCc
Q 005023 5 SFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDW-FVSIKVDREERPDVDK--VYMTYVQALYGGGGWPL 78 (718)
Q Consensus 5 a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~-Fv~vkvD~ee~pd~d~--~y~~~~q~~~g~~GwP~ 78 (718)
.++...++ ++++ .+||..|+.|. |.+.++.+++ +..++||.++.++... .....++ -+|+.|+|+
T Consensus 25 ~~~~~~~~--~vlv~F~a~wC~~C~~~~------p~l~~l~~~~~v~~~~vd~~~~~~~~~~d~~~~l~~-~~~v~~~Pt 95 (135)
T 3emx_A 25 EFRQLLQG--DAILAVYSKTCPHCHRDW------PQLIQASKEVDVPIVMFIWGSLIGERELSAARLEMN-KAGVEGTPT 95 (135)
T ss_dssp HHHHHHTS--SEEEEEEETTCHHHHHHH------HHHHHHHTTCCSCEEEEEECTTCCHHHHHHHHHHHH-HHTCCSSSE
T ss_pred HHHHHhCC--cEEEEEECCcCHhhhHhC------hhHHHHHHHCCCEEEEEECCCchhhhhhhhhHHHHH-HcCCceeCe
Confidence 34444444 6654 49999999997 4555555432 6677788755432211 1111111 268899998
Q ss_pred EEEeCCCCceeec-ccccCC
Q 005023 79 SVFLSPDLKPLMG-GTYFPP 97 (718)
Q Consensus 79 ~vfl~p~g~p~~~-~~y~p~ 97 (718)
.+|+. +|+++.. .++.++
T Consensus 96 ~~~~~-~G~~v~~~~G~~~~ 114 (135)
T 3emx_A 96 LVFYK-EGRIVDKLVGATPW 114 (135)
T ss_dssp EEEEE-TTEEEEEEESCCCH
T ss_pred EEEEc-CCEEEEEEeCCCCH
Confidence 88887 9998853 355553
No 137
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=97.57 E-value=6.4e-05 Score=68.51 Aligned_cols=82 Identities=12% Similarity=0.020 Sum_probs=48.1
Q ss_pred cCCcEEE---EcCCchhhhhhccccCcHHHHHHhh-cccEEEEecCCC---CcchHHHHHH--------------HHHHh
Q 005023 12 TRRTHFL---INTCHWCHVMEVESFEDEGVAKLLN-DWFVSIKVDREE---RPDVDKVYMT--------------YVQAL 70 (718)
Q Consensus 12 e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln-~~Fv~vkvD~ee---~pd~d~~y~~--------------~~q~~ 70 (718)
.+|++++ .+||+.|+.|.... .++.+.+. +++..|.|+.+. .++.-..|.+ .+...
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 109 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQF---QSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKE 109 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHH---HHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHH---HHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHh
Confidence 7888765 48999999987432 22334443 345555555433 1111111110 11223
Q ss_pred cCCCCCCcEEEeCCCCceeec-ccccC
Q 005023 71 YGGGGWPLSVFLSPDLKPLMG-GTYFP 96 (718)
Q Consensus 71 ~g~~GwP~~vfl~p~g~p~~~-~~y~p 96 (718)
+|..++|++++++++|+.+.. .++.+
T Consensus 110 ~~v~~~P~~~lid~~G~i~~~~~g~~~ 136 (145)
T 3erw_A 110 YHIITIPTSFLLNEKGEIEKTKIGPMT 136 (145)
T ss_dssp TTCCEESEEEEECTTCCEEEEEESCCC
T ss_pred cCcCccCeEEEEcCCCcEEEEEcCCcC
Confidence 688999999999999999863 24444
No 138
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=97.56 E-value=0.0001 Score=67.85 Aligned_cols=82 Identities=11% Similarity=-0.001 Sum_probs=51.3
Q ss_pred HhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhh--cccEEEEecCCCCcchHH-----------------HH
Q 005023 6 FCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLN--DWFVSIKVDREERPDVDK-----------------VY 63 (718)
Q Consensus 6 ~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln--~~Fv~vkvD~ee~pd~d~-----------------~y 63 (718)
+..+.-.+|++++ .+||..|+.|.... .++++.+. +++..|.|+.++.++.-. ..
T Consensus 21 ~~l~~~~gk~vll~F~a~wC~~C~~~~~~l---~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~ 97 (144)
T 1i5g_A 21 IALPSLAGKTVFFYFSASWCPPSRAFTPQL---IDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGM 97 (144)
T ss_dssp EEGGGGTTSEEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHH
T ss_pred ecHHHcCCCEEEEEEECCCCHHHHHHHHHH---HHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHH
Confidence 3444556888866 48999999887532 34555555 366666666554321100 01
Q ss_pred HHHHHHhcCCCCCCcEEEeC-CCCceeec
Q 005023 64 MTYVQALYGGGGWPLSVFLS-PDLKPLMG 91 (718)
Q Consensus 64 ~~~~q~~~g~~GwP~~vfl~-p~g~p~~~ 91 (718)
...+ ..+|+.++|+++|++ ++|+.+..
T Consensus 98 ~~~~-~~~~v~~~P~~~lid~~~G~i~~~ 125 (144)
T 1i5g_A 98 EFLT-TGFDVKSIPTLVGVEADSGNIITT 125 (144)
T ss_dssp HHHH-HHTTCCSSSEEEEEETTTCCEEES
T ss_pred HHHH-HHcCCCCCCEEEEEECCCCcEEec
Confidence 1111 236889999999999 89999863
No 139
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=97.56 E-value=0.0001 Score=69.46 Aligned_cols=83 Identities=13% Similarity=0.162 Sum_probs=51.4
Q ss_pred hhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhc--ccEEEEecCC------------------CCcchHHHH
Q 005023 7 CGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLND--WFVSIKVDRE------------------ERPDVDKVY 63 (718)
Q Consensus 7 ~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~--~Fv~vkvD~e------------------e~pd~d~~y 63 (718)
..+.-.+|++++ .+||+.|+.|. |.+.++..+ ++..|.|+.+ +.++.-+.|
T Consensus 31 ~l~~~~gk~~lv~F~~~~C~~C~~~~------~~l~~l~~~~~~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (165)
T 3ha9_A 31 SLNNVGGDVVILWFMAAWCPSCVYMA------DLLDRLTEKYREISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKF 104 (165)
T ss_dssp CGGGCCSSEEEEEEECTTCTTHHHHH------HHHHHHHHHCTTEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHH
T ss_pred eHHHhCCCEEEEEEECCCCcchhhhH------HHHHHHHHHcCCcEEEEEEecccccccccccccccCCCCCCHHHHHHH
Confidence 344456788865 48999999877 444544443 4555555544 333222222
Q ss_pred HH--------------HHHHhcCCCCCCcEEEeCCCCceeecccccC
Q 005023 64 MT--------------YVQALYGGGGWPLSVFLSPDLKPLMGGTYFP 96 (718)
Q Consensus 64 ~~--------------~~q~~~g~~GwP~~vfl~p~g~p~~~~~y~p 96 (718)
.+ .+...+|+.++|++++++++|+.+. .++.|
T Consensus 105 ~~~~~~~~~~~~~d~~~~~~~~~v~~~P~~~lid~~G~i~~-~g~~~ 150 (165)
T 3ha9_A 105 IANYGDPSWIMVMDDGSLVEKFNVRSIDYIVIMDKSSNVLY-AGTTP 150 (165)
T ss_dssp HHHHSCTTSEEEECCSHHHHHTTCCSSSEEEEEETTCCEEE-EEESC
T ss_pred HHHcCCCCeeEEeChHHHHHHhCCCCceEEEEEcCCCcEEE-eCCCC
Confidence 11 1222368889999999999999998 55553
No 140
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=97.54 E-value=0.00024 Score=64.96 Aligned_cols=80 Identities=16% Similarity=0.129 Sum_probs=50.5
Q ss_pred hhcCCcEEE---EcCCchhhhhhccccCcHHHHHHh-hc-ccEEEEecCCCCcchHHHHH-----------------HHH
Q 005023 10 TKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLL-ND-WFVSIKVDREERPDVDKVYM-----------------TYV 67 (718)
Q Consensus 10 k~e~K~ii~---y~~C~wChvM~~esf~d~~va~~l-n~-~Fv~vkvD~ee~pd~d~~y~-----------------~~~ 67 (718)
.-.+|++++ .+||.+|+.|..+. .++.+.+ .+ ++..|.|+.+..++.-..+. ..+
T Consensus 30 ~~~gk~vll~F~~~~C~~C~~~~~~l---~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 106 (148)
T 3fkf_A 30 RFRNRYLLLNFWASWCDPQPEANAEL---KRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSET 106 (148)
T ss_dssp TTTTSEEEEEEECGGGCCCHHHHHHH---HHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHH
T ss_pred ccCCcEEEEEEECCCCHHHHHHhHHH---HHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHH
Confidence 446888866 48999999987532 2344444 32 36666676665442111111 011
Q ss_pred HHhcCCCCCCcEEEeCCCCceeecc
Q 005023 68 QALYGGGGWPLSVFLSPDLKPLMGG 92 (718)
Q Consensus 68 q~~~g~~GwP~~vfl~p~g~p~~~~ 92 (718)
...+|..++|++++++++|+.+...
T Consensus 107 ~~~~~v~~~P~~~lid~~G~i~~~~ 131 (148)
T 3fkf_A 107 AKQYAILTLPTNILLSPTGKILARD 131 (148)
T ss_dssp HHHTTCCSSSEEEEECTTSBEEEES
T ss_pred HHhcCCCCcCEEEEECCCCeEEEec
Confidence 2237889999999999999998654
No 141
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=97.50 E-value=0.00012 Score=68.44 Aligned_cols=74 Identities=11% Similarity=0.058 Sum_probs=57.4
Q ss_pred cCCcEEEE---cCC--chhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCC
Q 005023 12 TRRTHFLI---NTC--HWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDL 86 (718)
Q Consensus 12 e~K~ii~y---~~C--~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g 86 (718)
.++++++. +|| +.|+.|.-- + +++++.+...+..+|||.|+.|++... +|+.++||.+|+. ||
T Consensus 32 ~~~~vlVdF~A~wCr~gpCk~iaPv-l--eela~e~~~~v~~~KVdvDe~~~la~~--------ygV~siPTlilFk-dG 99 (137)
T 2qsi_A 32 SGKIVVLFFRGDAVRFPEAADLAVV-L--PELINAFPGRLVAAEVAAEAERGLMAR--------FGVAVCPSLAVVQ-PE 99 (137)
T ss_dssp SSSEEEEEECCCTTTCTTHHHHHHH-H--HHHHHTSTTTEEEEEECGGGHHHHHHH--------HTCCSSSEEEEEE-CC
T ss_pred CCCcEEEEEeCCccCCCchhhHHhH-H--HHHHHHccCCcEEEEEECCCCHHHHHH--------cCCccCCEEEEEE-CC
Confidence 34488763 688 889999852 2 567777666789999999999998887 6889999999995 99
Q ss_pred ceeec-ccccCC
Q 005023 87 KPLMG-GTYFPP 97 (718)
Q Consensus 87 ~p~~~-~~y~p~ 97 (718)
+++.. .++.|+
T Consensus 100 ~~v~~~vG~~~k 111 (137)
T 2qsi_A 100 RTLGVIAKIQDW 111 (137)
T ss_dssp EEEEEEESCCCH
T ss_pred EEEEEEeCCCCH
Confidence 99864 355663
No 142
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=97.46 E-value=0.00018 Score=71.91 Aligned_cols=75 Identities=21% Similarity=0.290 Sum_probs=56.0
Q ss_pred hHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcc---cEEEEecCCCCcchHHHHHHHHHHhcCCCCCC
Q 005023 4 RSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDW---FVSIKVDREERPDVDKVYMTYVQALYGGGGWP 77 (718)
Q Consensus 4 ~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~---Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP 77 (718)
+.++...++++++++ .+||+.|+.|.... .++++.+... +..++||.++.+++.+. +|+.|+|
T Consensus 138 ~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~---~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~--------~~v~~~P 206 (241)
T 3idv_A 138 ENFDEVVNDADIILVEFYAPWCGHCKKLAPEY---EKAAKELSKRSPPIPLAKVDATAETDLAKR--------FDVSGYP 206 (241)
T ss_dssp TTHHHHHHHCSEEEEEEECTTCTGGGGTHHHH---HHHHHHHHTSSSCCCEEEEETTTCHHHHHH--------TTCCSSS
T ss_pred HHHHHhhccCCeEEEEEECCCCHHHHHhHHHH---HHHHHHHhccCCcEEEEEEECCCCHHHHHH--------cCCcccC
Confidence 445666677888865 48999999997532 3456666433 88999999998876655 6889999
Q ss_pred cEEEeCCCCceee
Q 005023 78 LSVFLSPDLKPLM 90 (718)
Q Consensus 78 ~~vfl~p~g~p~~ 90 (718)
+.+|+. +|+++.
T Consensus 207 t~~~~~-~g~~~~ 218 (241)
T 3idv_A 207 TLKIFR-KGRPYD 218 (241)
T ss_dssp EEEEEE-TTEEEE
T ss_pred EEEEEE-CCeEEE
Confidence 998886 688764
No 143
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=96.58 E-value=1.8e-05 Score=74.20 Aligned_cols=103 Identities=17% Similarity=0.211 Sum_probs=59.1
Q ss_pred HhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHh-hcccEEEEecCCCCcchHHHHHHHH--------------
Q 005023 6 FCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLL-NDWFVSIKVDREERPDVDKVYMTYV-------------- 67 (718)
Q Consensus 6 ~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~l-n~~Fv~vkvD~ee~pd~d~~y~~~~-------------- 67 (718)
+..+.-.+|++++ ++||.+|+.+... ++..-..++- ++++..|.|+.++.++..+.|.+..
T Consensus 26 ~~l~~~~gk~vll~f~a~~C~~C~~~~~~-l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~ 104 (159)
T 2ls5_A 26 VTLSSLRGKVVMLQFTASWCGVCRKEMPF-IEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADI 104 (159)
Confidence 3344446788755 5899999987643 4431111122 4567777787776655443333210
Q ss_pred HHhcC--CCCCCcEEEeCCCCceeecccccCCCCCCCcccHHHHHHHHHH
Q 005023 68 QALYG--GGGWPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRKVKD 115 (718)
Q Consensus 68 q~~~g--~~GwP~~vfl~p~g~p~~~~~y~p~~~~~~~~~f~~~L~~i~~ 115 (718)
...+| ..|+|+++|++++|+.+....-+.+. .+.++|+++.+
T Consensus 105 ~~~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~------~l~~~l~~l~~ 148 (159)
T 2ls5_A 105 FAKYALRDAGITRNVLIDREGKIVKLTRLYNEE------EFASLVQQINE 148 (159)
Confidence 01123 46799999999999998643212222 46666665543
No 144
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2
Probab=97.45 E-value=0.0013 Score=76.50 Aligned_cols=90 Identities=9% Similarity=0.051 Sum_probs=59.8
Q ss_pred hchHHHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEee-cCCCC--CCCCCc
Q 005023 415 VSWNGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSF-RNGPS--KAPGFL 491 (718)
Q Consensus 415 t~WNgl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~-~~g~~--~~~~~l 491 (718)
|+-.+-+++|||.|++++++- ...| ..++|+.|+++++|..++-- ..+... ..+.. ...++.
T Consensus 286 s~~a~e~AAAlAaAS~vfk~~--D~~y--------A~~~L~~Ak~l~~fA~~~~~-----~~y~~~~~~~~g~Y~ss~~~ 350 (639)
T 1clc_A 286 SAATADFVAMTAMAARIFRPY--DPQY--------AEKCINAAKVSYEFLKNNPA-----NVFANQSGFSTGEYATVSDA 350 (639)
T ss_dssp HHHHHHHHHHHHHHHHHHTTT--CHHH--------HHHHHHHHHHHHHHHHHCCS-----CCCCCCTTCCSCCCCCSCSH
T ss_pred cHHHHHHHHHHHHHHHhcccc--CHHH--------HHHHHHHHHHHHHHHHHcCC-----CccCCCccccccccCCCCcc
Confidence 344577899999999999751 1111 15789999999999987531 111100 00000 112333
Q ss_pred ccHHHHHHHHHHHHHHcCChHHHHHHHHHHH
Q 005023 492 DDYAFLISGLLDLYEFGSGTKWLVWAIELQN 522 (718)
Q Consensus 492 ~DyA~li~all~LYeaTgd~~~L~~A~~L~~ 522 (718)
| .+++|.++||.+|||..||+.|.+...
T Consensus 351 D---El~WAAawLy~ATgd~~Yl~~a~~~~~ 378 (639)
T 1clc_A 351 D---DRLWAAAEMWETLGDEEYLRDFENRAA 378 (639)
T ss_dssp H---HHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred h---HHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3 458999999999999999999998764
No 145
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=97.43 E-value=0.00023 Score=65.72 Aligned_cols=79 Identities=8% Similarity=0.004 Sum_probs=48.9
Q ss_pred hhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhh--cccEEEEecCCCCcch-H----------------HHHHH
Q 005023 8 GGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLN--DWFVSIKVDREERPDV-D----------------KVYMT 65 (718)
Q Consensus 8 ~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln--~~Fv~vkvD~ee~pd~-d----------------~~y~~ 65 (718)
.+.-.+|++++ .+||+.|+.+.... .++++.+. +++..|.|+.++.++. . .....
T Consensus 23 l~~~~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 99 (146)
T 1o8x_A 23 VKSLAGKLVFFYFSASWCPPARGFTPQL---IEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQK 99 (146)
T ss_dssp GGGGTTCEEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHH
T ss_pred HHHhCCCEEEEEEEccCCHHHHHHHHHH---HHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHH
Confidence 34456888865 48999999877432 34555555 3555555555543210 0 00111
Q ss_pred HHHHhcCCCCCCcEEEeC-CCCceee
Q 005023 66 YVQALYGGGGWPLSVFLS-PDLKPLM 90 (718)
Q Consensus 66 ~~q~~~g~~GwP~~vfl~-p~g~p~~ 90 (718)
.+ ..+|+.++|+++|++ ++|+++.
T Consensus 100 ~~-~~~~v~~~Pt~~lid~~~G~i~~ 124 (146)
T 1o8x_A 100 LS-KHFNVESIPTLIGVDADSGDVVT 124 (146)
T ss_dssp HH-HHTTCCSSSEEEEEETTTCCEEE
T ss_pred HH-HHhCCCCCCEEEEEECCCCeEEE
Confidence 22 236889999999999 8999986
No 146
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=97.43 E-value=0.00017 Score=67.15 Aligned_cols=84 Identities=11% Similarity=0.043 Sum_probs=47.3
Q ss_pred HHhhhhhcCCcEEE---EcCCchhhhh-hccccCcHHHHHHhh-cccEEEEecCC------CCcc-hHHHHHH-------
Q 005023 5 SFCGGTKTRRTHFL---INTCHWCHVM-EVESFEDEGVAKLLN-DWFVSIKVDRE------ERPD-VDKVYMT------- 65 (718)
Q Consensus 5 a~~~Ak~e~K~ii~---y~~C~wChvM-~~esf~d~~va~~ln-~~Fv~vkvD~e------e~pd-~d~~y~~------- 65 (718)
.+..+.-.+|++++ .+||..|+.+ .. .+ .++.+.+. +++..|.|+.+ +.++ +.+...+
T Consensus 20 ~~~l~~~~gk~vlv~f~a~wC~~C~~~~~~-~l--~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (158)
T 3eyt_A 20 DLTLADLRGKVIVIEAFQMLCPGCVMHGIP-LA--QKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPV 96 (158)
T ss_dssp CCCTGGGTTSEEEEEEECTTCHHHHHTHHH-HH--HHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCE
T ss_pred ccCHHHhCCCEEEEEEECCcCcchhhhhhH-HH--HHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceE
Confidence 34455566899866 4899999984 32 11 12333332 34555555432 1111 1111111
Q ss_pred -----------HHHHhcCCCCCCcEEEeCCCCceeec
Q 005023 66 -----------YVQALYGGGGWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 66 -----------~~q~~~g~~GwP~~vfl~p~g~p~~~ 91 (718)
.+...+|..|+|++++++++|+.+..
T Consensus 97 ~~d~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 133 (158)
T 3eyt_A 97 GVDQPGDGAMPRTMAAYQMRGTPSLLLIDKAGDLRAH 133 (158)
T ss_dssp EEECCCSSSSCHHHHHTTCCSSSEEEEECTTSEEEEE
T ss_pred EEcCccchhhHHHHHHcCCCCCCEEEEECCCCCEEEE
Confidence 11223688999999999999999864
No 147
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=97.40 E-value=0.00024 Score=65.05 Aligned_cols=81 Identities=12% Similarity=0.103 Sum_probs=49.4
Q ss_pred hhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhh--cccEEEEecCCCCcch-H----------------HHHH
Q 005023 7 CGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLN--DWFVSIKVDREERPDV-D----------------KVYM 64 (718)
Q Consensus 7 ~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln--~~Fv~vkvD~ee~pd~-d----------------~~y~ 64 (718)
..+.-++|++++ .+||+.|+.|.... .++++.+. +++..|.|+.++.++. . ....
T Consensus 22 ~l~~~~gk~vll~F~a~wC~~C~~~~~~l---~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (144)
T 1o73_A 22 SLGSLVGKTVFLYFSASWCPPCRGFTPVL---AEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVS 98 (144)
T ss_dssp CSGGGTTCEEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHH
T ss_pred cHHHhCCCEEEEEEECcCCHHHHHHHHHH---HHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHH
Confidence 344456888865 48999999887532 23444454 3555555555543211 0 0011
Q ss_pred HHHHHhcCCCCCCcEEEeC-CCCceeec
Q 005023 65 TYVQALYGGGGWPLSVFLS-PDLKPLMG 91 (718)
Q Consensus 65 ~~~q~~~g~~GwP~~vfl~-p~g~p~~~ 91 (718)
..++ .+|+.++|+++|++ ++|+++..
T Consensus 99 ~~~~-~~~v~~~Pt~~lid~~~G~i~~~ 125 (144)
T 1o73_A 99 ELGK-TFGVESIPTLITINADTGAIIGT 125 (144)
T ss_dssp HHHH-HHTCCSSSEEEEEETTTCCEEES
T ss_pred HHHH-HcCCCCCCEEEEEECCCCeEEec
Confidence 1222 36889999999999 89999863
No 148
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=97.38 E-value=5.8e-05 Score=70.85 Aligned_cols=72 Identities=11% Similarity=0.020 Sum_probs=39.6
Q ss_pred HhhhhhcCCcEEE---EcC--CchhhhhhccccCcHHHHHHhhcccE--EEEecCCCCcchHHHHHHHHHHhcCCCCCCc
Q 005023 6 FCGGTKTRRTHFL---INT--CHWCHVMEVESFEDEGVAKLLNDWFV--SIKVDREERPDVDKVYMTYVQALYGGGGWPL 78 (718)
Q Consensus 6 ~~~Ak~e~K~ii~---y~~--C~wChvM~~esf~d~~va~~ln~~Fv--~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~ 78 (718)
++...++++.++. .+| |..|+.|... | +++++.+ ..+. .+|||.++.|++.+. +|+.|+|+
T Consensus 27 f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~-l--~~la~~~-~~v~~~~~~Vd~d~~~~la~~--------~~V~~iPT 94 (142)
T 2es7_A 27 VDDWIKRVGDGVILLSSDPRRTPEVSDNPVM-I--AELLREF-PQFDWQVAVADLEQSEAIGDR--------FNVRRFPA 94 (142)
T ss_dssp -------CCSEEEEECCCSCC----CCHHHH-H--HHHHHTC-TTSCCEEEEECHHHHHHHHHT--------TTCCSSSE
T ss_pred HHHHHHhCCCEEEEEECCCCCCccHHHHHHH-H--HHHHHHh-cccceeEEEEECCCCHHHHHh--------cCCCcCCe
Confidence 3444445555443 234 8899998743 2 2344444 4567 889999987776554 68899999
Q ss_pred EEEeCCCCceee
Q 005023 79 SVFLSPDLKPLM 90 (718)
Q Consensus 79 ~vfl~p~g~p~~ 90 (718)
++|+ .+|+++.
T Consensus 95 ~~~f-k~G~~v~ 105 (142)
T 2es7_A 95 TLVF-TDGKLRG 105 (142)
T ss_dssp EEEE-SCC----
T ss_pred EEEE-eCCEEEE
Confidence 9999 8999874
No 149
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=97.35 E-value=0.0017 Score=74.88 Aligned_cols=85 Identities=13% Similarity=0.093 Sum_probs=57.8
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEeecCCCCCCC----CCcc
Q 005023 417 WNGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPSKAP----GFLD 492 (718)
Q Consensus 417 WNgl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~~g~~~~~----~~l~ 492 (718)
-.+.+++|||.|++++++- ...| ..++|+.|+++++|..++- |. |.++.. .. ....
T Consensus 152 ~a~~~AAAlAaAS~vfk~~--D~~y--------A~~~L~~Ak~~~~fA~~~~-----g~----y~~~~~-~~~~Y~s~s~ 211 (605)
T 1tf4_A 152 VAAETAAAMAASSIVFADD--DPAY--------AATLVQHAKQLYTFADTYR-----GV----YSDCVP-AGAFYNSWSG 211 (605)
T ss_dssp HHHHHHHHHHHHHHHHTTT--CHHH--------HHHHHHHHHHHHHHHHHSC-----CC----GGGTST-THHHHCCSSC
T ss_pred HHHHHHHHHHHHHhhcccc--CHHH--------HHHHHHHHHHHHHHHHHcC-----CC----cCCCCC-ccccccCCCC
Confidence 4488999999999999851 0111 1578999999999998752 11 111111 10 0012
Q ss_pred cHHHHHHHHHHHHHHcCChHHHHHHHHHH
Q 005023 493 DYAFLISGLLDLYEFGSGTKWLVWAIELQ 521 (718)
Q Consensus 493 DyA~li~all~LYeaTgd~~~L~~A~~L~ 521 (718)
..-.+++|.++||.+|||..||+.|.+..
T Consensus 212 ~~DEl~WAAawLy~ATgd~~Yl~~a~~~~ 240 (605)
T 1tf4_A 212 YQDELVWGAYWLYKATGDDSYLAKAEYEY 240 (605)
T ss_dssp SHHHHHHHHHHHHHHHCCHHHHHHHHHHG
T ss_pred CchHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 23457899999999999999999998743
No 150
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=97.34 E-value=0.00018 Score=66.06 Aligned_cols=82 Identities=16% Similarity=0.102 Sum_probs=56.0
Q ss_pred hcCCcEEE---EcCCchhhhhhccccCcHHHHHHh-hcccEEEEecCCCCcchHHHHHH----------------HHHHh
Q 005023 11 KTRRTHFL---INTCHWCHVMEVESFEDEGVAKLL-NDWFVSIKVDREERPDVDKVYMT----------------YVQAL 70 (718)
Q Consensus 11 ~e~K~ii~---y~~C~wChvM~~esf~d~~va~~l-n~~Fv~vkvD~ee~pd~d~~y~~----------------~~q~~ 70 (718)
-.+|++++ .+||+.|+.+...--++|.+.+.+ ++++..|.|+.++.++.-..+.+ .....
T Consensus 29 ~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 108 (142)
T 3eur_A 29 FPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNL 108 (142)
T ss_dssp CCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTC
T ss_pred cCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhh
Confidence 35688876 389999999887666666677666 35677777777665432111110 01224
Q ss_pred cCCCCCCcEEEeCCCCceeecc
Q 005023 71 YGGGGWPLSVFLSPDLKPLMGG 92 (718)
Q Consensus 71 ~g~~GwP~~vfl~p~g~p~~~~ 92 (718)
++..|+|++++++++|+.+...
T Consensus 109 ~~v~~~P~~~lid~~G~i~~~~ 130 (142)
T 3eur_A 109 YDLRAIPTLYLLDKNKTVLLKD 130 (142)
T ss_dssp SCCTTCSEEEEECTTCBEEEEE
T ss_pred cCCCcCCeEEEECCCCcEEecC
Confidence 6788999999999999999653
No 151
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=97.33 E-value=0.00034 Score=65.20 Aligned_cols=21 Identities=14% Similarity=0.028 Sum_probs=19.0
Q ss_pred cCCCCCCcEEEeCCCCceeec
Q 005023 71 YGGGGWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 71 ~g~~GwP~~vfl~p~g~p~~~ 91 (718)
+|+.|+|+++|++++|+++..
T Consensus 116 ~~v~~~P~~~lid~~G~i~~~ 136 (160)
T 3lor_A 116 YRLEGTPSIILADRKGRIRQV 136 (160)
T ss_dssp TTCCSSSEEEEECTTSBEEEE
T ss_pred cccCccceEEEECCCCcEEEE
Confidence 688999999999999999864
No 152
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=97.32 E-value=0.00037 Score=66.89 Aligned_cols=82 Identities=12% Similarity=0.137 Sum_probs=50.3
Q ss_pred hhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcc-c------EEEEecCCC-CcchHHHHHHHHH-------
Q 005023 7 CGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDW-F------VSIKVDREE-RPDVDKVYMTYVQ------- 68 (718)
Q Consensus 7 ~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~-F------v~vkvD~ee-~pd~d~~y~~~~q------- 68 (718)
..+.-.+|++++ ++||+.|+.|..+ | .++.+.+.+. + ..|.|+.++ .++.-+.|.+...
T Consensus 53 ~l~~~~gk~vlv~F~a~~C~~C~~~~~~-l--~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~ 129 (183)
T 3lwa_A 53 NLSDFENQVVILNAWGQWCAPCRSESDD-L--QIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIY 129 (183)
T ss_dssp EGGGGTTSEEEEEEECTTCHHHHHHHHH-H--HHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEE
T ss_pred cHHHhCCCEEEEEEECCcCHhHHHHHHH-H--HHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEE
Confidence 344456788865 5899999987653 2 2344444432 5 666666665 4554444432210
Q ss_pred --------Hh--cCCCCCCcEEEeCCCCceeec
Q 005023 69 --------AL--YGGGGWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 69 --------~~--~g~~GwP~~vfl~p~g~p~~~ 91 (718)
.+ ++..++|++++++++|+++..
T Consensus 130 d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 162 (183)
T 3lwa_A 130 DPPFMTAASLGGVPASVIPTTIVLDKQHRPAAV 162 (183)
T ss_dssp CTTCGGGGGTTTCCTTCCSEEEEECTTSCEEEE
T ss_pred CCcchHHHHhccCCCCCCCeEEEECCCCcEEEE
Confidence 01 146789999999999999864
No 153
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=97.31 E-value=0.00034 Score=66.55 Aligned_cols=82 Identities=16% Similarity=0.145 Sum_probs=49.9
Q ss_pred hhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhc--ccEEEEecCCCCcc-hHHH---------------HHH
Q 005023 7 CGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLND--WFVSIKVDREERPD-VDKV---------------YMT 65 (718)
Q Consensus 7 ~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~--~Fv~vkvD~ee~pd-~d~~---------------y~~ 65 (718)
..+.-.+|++++ .+||..|+.|.... .++++.+.+ ++..|.|+.++.+. +.+. ...
T Consensus 42 ~l~~~~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (165)
T 3s9f_A 42 DMDSLSGKTVFFYFSASWCPPCRGFTPQL---VEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVE 118 (165)
T ss_dssp CSGGGTTSEEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHH
T ss_pred cHHHcCCCEEEEEEECCcChhHHHHHHHH---HHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHH
Confidence 344456888866 48999999987433 345555543 44444444444322 1110 001
Q ss_pred HHHHhcCCCCCCcEEEeCCC-Cceeec
Q 005023 66 YVQALYGGGGWPLSVFLSPD-LKPLMG 91 (718)
Q Consensus 66 ~~q~~~g~~GwP~~vfl~p~-g~p~~~ 91 (718)
.+...+|+.++|+++|++++ |+++..
T Consensus 119 ~l~~~~~v~~~Pt~~lid~~~G~iv~~ 145 (165)
T 3s9f_A 119 ALTKKYSVESIPTLIGLNADTGDTVTT 145 (165)
T ss_dssp HHHHHTTCCSSSEEEEEETTTCCEEES
T ss_pred HHHHHcCCCCCCEEEEEeCCCCEEEec
Confidence 22234788999999999998 999863
No 154
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=97.31 E-value=0.0002 Score=61.47 Aligned_cols=60 Identities=17% Similarity=0.172 Sum_probs=41.4
Q ss_pred EEEcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCceeecccccC
Q 005023 17 FLINTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLMGGTYFP 96 (718)
Q Consensus 17 i~y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p~~~~~y~p 96 (718)
+..+||++|+.|.. +-+-++..+ .++||.++.|++.+. +|.. .|+.+| .+|+++. +.++
T Consensus 6 f~a~~C~~C~~~~~-------~L~~~~~~~-~~~vdid~~~~l~~~--------~g~~-vPtl~~--~~G~~v~--g~~~ 64 (87)
T 1ttz_A 6 YQRDDCHLCDQAVE-------ALAQARAGA-FFSVFIDDDAALESA--------YGLR-VPVLRD--PMGRELD--WPFD 64 (87)
T ss_dssp EECSSCHHHHHHHH-------HHHHTTCCC-EEEEECTTCHHHHHH--------HTTT-CSEEEC--TTCCEEE--SCCC
T ss_pred EECCCCchHHHHHH-------HHHHHHHhh-eEEEECCCCHHHHHH--------hCCC-cCeEEE--ECCEEEe--CCCC
Confidence 34589999999874 223344432 378999998886654 4666 998877 7899985 3455
Q ss_pred C
Q 005023 97 P 97 (718)
Q Consensus 97 ~ 97 (718)
+
T Consensus 65 ~ 65 (87)
T 1ttz_A 65 A 65 (87)
T ss_dssp H
T ss_pred H
Confidence 3
No 155
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=97.31 E-value=0.00026 Score=62.84 Aligned_cols=73 Identities=11% Similarity=0.167 Sum_probs=43.9
Q ss_pred HHhhhhhcCCcEE-EEcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeC
Q 005023 5 SFCGGTKTRRTHF-LINTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLS 83 (718)
Q Consensus 5 a~~~Ak~e~K~ii-~y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~ 83 (718)
.++...+.++.++ ..+||++|+.|.. +.+-++..|..|.||.++.+ ... .......+|..++|+. |.
T Consensus 12 ~~~~~~~~~~vv~f~a~~C~~C~~~~~-------~l~~~~~~~~~v~v~~~~~~--~~~-~~~l~~~~~v~~~Pt~-~~- 79 (116)
T 2e7p_A 12 KAKELASSAPVVVFSKTYCGYCNRVKQ-------LLTQVGASYKVVELDELSDG--SQL-QSALAHWTGRGTVPNV-FI- 79 (116)
T ss_dssp HHHHHHTSSSEEEEECTTCHHHHHHHH-------HHHHHTCCCEEEEGGGSTTH--HHH-HHHHHHHHSCCSSCEE-EE-
T ss_pred HHHHHHcCCCEEEEECCCChhHHHHHH-------HHHHcCCCeEEEEccCCCCh--HHH-HHHHHHHhCCCCcCEE-EE-
Confidence 3444444443332 3589999999874 23345566888888876542 111 1111223688999998 55
Q ss_pred CCCceee
Q 005023 84 PDLKPLM 90 (718)
Q Consensus 84 p~g~p~~ 90 (718)
+|+.+.
T Consensus 80 -~g~~v~ 85 (116)
T 2e7p_A 80 -GGKQIG 85 (116)
T ss_dssp -TTEEEE
T ss_pred -CCEEEC
Confidence 688774
No 156
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=97.30 E-value=0.00043 Score=70.06 Aligned_cols=65 Identities=15% Similarity=0.206 Sum_probs=48.8
Q ss_pred hhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhc---ccEEEEecC--CCCcchHHHHHHHHHHhcCCCCCCcEEE
Q 005023 10 TKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLND---WFVSIKVDR--EERPDVDKVYMTYVQALYGGGGWPLSVF 81 (718)
Q Consensus 10 k~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~---~Fv~vkvD~--ee~pd~d~~y~~~~q~~~g~~GwP~~vf 81 (718)
.+.+|++++ .+||..|+.|...- .++++.+.. .+..++||. ++.+++.+. +|+.|+|+.+|
T Consensus 27 ~~~~~~vlv~F~a~wC~~C~~~~p~~---~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~--------~~v~~~Pt~~~ 95 (244)
T 3q6o_A 27 LGSRSAWAVEFFASWCGHCIAFAPTW---XALAEDVKAWRPALYLAALDCAEETNSAVCRD--------FNIPGFPTVRF 95 (244)
T ss_dssp SSCSSEEEEEEECTTCHHHHHHHHHH---HHHHHHTGGGTTTEEEEEEETTSTTTHHHHHH--------TTCCSSSEEEE
T ss_pred hhCCCeEEEEEECCcCHHHHHHHHHH---HHHHHHHHhccCcEEEEEEeCCchhhHHHHHH--------cCCCccCEEEE
Confidence 355688866 38999999998533 556666765 688888887 666665554 68899999999
Q ss_pred eCCC
Q 005023 82 LSPD 85 (718)
Q Consensus 82 l~p~ 85 (718)
+.+.
T Consensus 96 ~~~g 99 (244)
T 3q6o_A 96 FXAF 99 (244)
T ss_dssp ECTT
T ss_pred EeCC
Confidence 9974
No 157
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=97.27 E-value=5.1e-05 Score=67.46 Aligned_cols=69 Identities=9% Similarity=0.031 Sum_probs=41.6
Q ss_pred hHHhhhhhcCCcEE---EEcCCchhhhhhccccCcHHHHHHhhcccEEEEecCC----CCcchHHHHHHHHHHhcCCCCC
Q 005023 4 RSFCGGTKTRRTHF---LINTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDRE----ERPDVDKVYMTYVQALYGGGGW 76 (718)
Q Consensus 4 ~a~~~Ak~e~K~ii---~y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~e----e~pd~d~~y~~~~q~~~g~~Gw 76 (718)
++++.|+..+|+++ ..+||..|+.|.. .|+. +++ .|-.|.+|.+ +.+++.+. +|+.|+
T Consensus 3 ~~~~la~~~~k~~vV~F~A~WC~~C~~~~p-~~~~--~a~----~~~~v~~~~~~~~~~~~~l~~~--------~~V~~~ 67 (106)
T 3kp8_A 3 LAVGLAAHLRQIGGTMYGAYWCPHCQDQKE-LFGA--AFD----QVPYVECSPNGPGTPQAQECTE--------AGITSY 67 (106)
T ss_dssp HHHHHHHHHHHHTCEEEECTTCHHHHHHHH-HHGG--GGG----GSCEEESCTTCTTSCCCHHHHH--------TTCCSS
T ss_pred HhhHHHHhcCCCEEEEEECCCCHHHHHHHH-HHHH--HHH----hCCEEEEecccccchhHHHHHH--------cCCeEe
Confidence 34555555555543 3499999999973 3332 222 2323444433 55655543 789999
Q ss_pred CcEEEeCCCCceee
Q 005023 77 PLSVFLSPDLKPLM 90 (718)
Q Consensus 77 P~~vfl~p~g~p~~ 90 (718)
|+.+| +|+++.
T Consensus 68 PT~~i---~G~~~~ 78 (106)
T 3kp8_A 68 PTWII---NGRTYT 78 (106)
T ss_dssp SEEEE---TTEEEE
T ss_pred CEEEE---CCEEec
Confidence 99777 888743
No 158
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=97.25 E-value=0.0096 Score=68.75 Aligned_cols=183 Identities=17% Similarity=0.196 Sum_probs=109.5
Q ss_pred cCCCcEEEEecCCCCCCCCCcchHHHHHHHHHHHHHH---HHcc-CChHHHHHHHHHHHHHHHhccCCCCceeeec-cCC
Q 005023 228 HVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDA---FSLT-KDVFYSYICRDILDYLRRDMIGPGGEIFSAE-DAD 302 (718)
Q Consensus 228 ~v~GGF~RYsvD~~W~vPHFEKmLyDnA~ll~~ya~A---y~~t-~~~~y~~~A~~~~~~l~~~m~~p~Ggf~sa~-DAD 302 (718)
.+-||+| |..=++-+---|-|....|+++|.+. |... +-+..++.++-.++||++ |....|.||.-. |.+
T Consensus 48 DlsGGwy----DAGD~~Kf~~p~a~t~~~L~w~~~e~~~~~~~~g~~~d~ldeikwg~Dyllk-~~~~~~~~y~qVGdg~ 122 (614)
T 1g87_A 48 DLTGGWY----DAGDHVKFNLPMSYTSAMLAWSLYEDKDAYDKSGQTKYIMDGIKWANDYFIK-CNPTPGVYYYQVGDGG 122 (614)
T ss_dssp CCCCSBC----CSSSCCEEHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-TCCSTTCEEEEESCHH
T ss_pred cCCCCee----eCCCCcEeccccHHHHHHHHHHHHHhHHHHhhCCChHHHHHHHHHHHHHHHH-hccCCCcEEEEecCCC
Confidence 3678888 55434444456888888898888775 4333 347889999999999998 643446777632 222
Q ss_pred cccccCcccccCCceEeechHHHHHHhchhHHHHHHHhcccCCCCcCCCCCCCCCCccCCcceeeccCCchHHHHhcCCC
Q 005023 303 SAETEGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMP 382 (718)
Q Consensus 303 s~~~~~~~~~~EG~yY~Wt~~Ei~~~L~~~~~~~~~~~~v~~~Gn~~~~~~~dp~~~~eg~nvL~~~~~~~~~a~~~g~~ 382 (718)
.+ ...|.+-|+ | + ..+....+.
T Consensus 123 ~D------------H~~w~~pe~---------------------------~--~----~~r~~y~v~------------- 144 (614)
T 1g87_A 123 KD------------HSWWGPAEV---------------------------M--Q----MERPSFKVD------------- 144 (614)
T ss_dssp HH------------HTCCSCGGG---------------------------C--C----SCCCEEEEC-------------
T ss_pred cC------------ccccCCccc---------------------------C--C----CCCcceEec-------------
Confidence 11 001332110 0 0 000000000
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhchHHHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHH
Q 005023 383 LEKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAAS 462 (718)
Q Consensus 383 ~~~~~~~l~~~r~~L~~~R~~R~~P~~Ddkilt~WNgl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~ 462 (718)
...|. |+-.+.+++|||.|++++++- ...| ..++|+.|+++++
T Consensus 145 ---------------------~~~pg------sd~a~e~AAAlAaAS~vfk~~--D~~y--------A~~~L~~Ak~l~~ 187 (614)
T 1g87_A 145 ---------------------ASKPG------SAVCASTAASLASAAVVFKSS--DPTY--------AEKCISHAKNLFD 187 (614)
T ss_dssp ---------------------SSSCC------HHHHHHHHHHHHHHHHHHTTT--CHHH--------HHHHHHHHHHHHH
T ss_pred ---------------------CCCCc------cHHHHHHHHHHHHHHHhcccc--CHHH--------HHHHHHHHHHHHH
Confidence 01122 334588999999999999751 1111 1578999999999
Q ss_pred HHHHhccccCCCeEEEeecCCCC--CCCCCcccHHHHHHHHHHHHHHcCChHHHHHHHHH
Q 005023 463 FIRRHLYDEQTHRLQHSFRNGPS--KAPGFLDDYAFLISGLLDLYEFGSGTKWLVWAIEL 520 (718)
Q Consensus 463 ~l~~~~~d~~~g~l~~~~~~g~~--~~~~~l~DyA~li~all~LYeaTgd~~~L~~A~~L 520 (718)
|..++--. .+ ...+.. ...++.| .+++|.++||.+|||..||+.|.+.
T Consensus 188 fA~~~~~~--~~-----~~~~~~~Y~ss~~~D---El~WAAawLy~ATgd~~Yl~~a~~~ 237 (614)
T 1g87_A 188 MADKAKSD--AG-----YTAASGYYSSSSFYD---DLSWAAVWLYLATNDSTYLDKAESY 237 (614)
T ss_dssp HHHHHCCC--TT-----CCTTTTTSCCSCSHH---HHHHHHHHHHHHHCCHHHHHHHHHT
T ss_pred HHHHcCCC--CC-----CCcCcCCcCCCCchh---HHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 99987421 10 001111 1133334 4588999999999999999999874
No 159
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.24 E-value=0.00072 Score=62.20 Aligned_cols=62 Identities=10% Similarity=-0.006 Sum_probs=45.5
Q ss_pred CCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCcee
Q 005023 13 RRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPL 89 (718)
Q Consensus 13 ~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p~ 89 (718)
+|++++ .+||..|+.|... |+ ++++.. .++..++||.++.+. -+++.++|+.+|+. +|+.+
T Consensus 30 ~~~vvv~f~a~wC~~C~~~~p~-l~--~la~~~-~~v~~~~vd~~~~~~-----------~~~i~~~Pt~~~~~-~G~~v 93 (135)
T 2dbc_A 30 DLWVVIHLYRSSVPMCLVVNQH-LS--VLARKF-PETKFVKAIVNSCIE-----------HYHDNCLPTIFVYK-NGQIE 93 (135)
T ss_dssp SCEEEEEECCTTCHHHHHHHHH-HH--HHHHHC-SSEEEEEECCSSSCS-----------SCCSSCCSEEEEES-SSSCS
T ss_pred CCEEEEEEECCCChHHHHHHHH-HH--HHHHHC-CCcEEEEEEhhcCcc-----------cCCCCCCCEEEEEE-CCEEE
Confidence 478866 3899999999853 32 244333 347788999988762 26889999999997 99987
Q ss_pred e
Q 005023 90 M 90 (718)
Q Consensus 90 ~ 90 (718)
.
T Consensus 94 ~ 94 (135)
T 2dbc_A 94 G 94 (135)
T ss_dssp E
T ss_pred E
Confidence 5
No 160
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=97.24 E-value=0.00027 Score=65.35 Aligned_cols=80 Identities=15% Similarity=0.186 Sum_probs=45.0
Q ss_pred hhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhc-ccEEEEec--CCCCcchHHHHH-------------HHHH
Q 005023 8 GGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLND-WFVSIKVD--REERPDVDKVYM-------------TYVQ 68 (718)
Q Consensus 8 ~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~-~Fv~vkvD--~ee~pd~d~~y~-------------~~~q 68 (718)
.+.-.+|++++ ++||+.|+.|... + .++++.+.+ ++..|-|+ .+....+.+... ....
T Consensus 23 l~~~~gk~~lv~f~~~~C~~C~~~~~~-l--~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 99 (153)
T 2l5o_A 23 NADLQGKVTLINFWFPSCPGCVSEMPK-I--IKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVG 99 (153)
T ss_dssp HHHHTTCEEEEEEECTTCTTHHHHHHH-H--HHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHH
T ss_pred HHHhCCCEEEEEEECCCCccHHHHHHH-H--HHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHH
Confidence 34446788755 5899999988753 2 234444443 34444443 322111100000 0011
Q ss_pred HhcCCCCCCcEEEeCCCCceee
Q 005023 69 ALYGGGGWPLSVFLSPDLKPLM 90 (718)
Q Consensus 69 ~~~g~~GwP~~vfl~p~g~p~~ 90 (718)
..+|..++|++++++++|+.+.
T Consensus 100 ~~~~i~~~P~~~lid~~G~i~~ 121 (153)
T 2l5o_A 100 QAFGTQVYPTSVLIGKKGEILK 121 (153)
T ss_dssp HHHTCCSSSEEEEECSSSCCCE
T ss_pred HHcCCCccCeEEEECCCCcEEE
Confidence 1268889999999999999874
No 161
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=97.18 E-value=0.00048 Score=68.69 Aligned_cols=70 Identities=17% Similarity=0.153 Sum_probs=48.7
Q ss_pred HHhhhhhcCCcE-EE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEE
Q 005023 5 SFCGGTKTRRTH-FL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSV 80 (718)
Q Consensus 5 a~~~Ak~e~K~i-i~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~v 80 (718)
.++...+.++++ |. .+||++|+.|... + .++++.. .++..++||.++.+++.+. +|+.|+|+++
T Consensus 127 ~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~-~--~~~~~~~-~~v~~~~vd~~~~~~l~~~--------~~v~~~Pt~~ 194 (229)
T 2ywm_A 127 TLELLQVVDIPIEIWVFVTTSCGYCPSAAVM-A--WDFALAN-DYITSKVIDASENQDLAEQ--------FQVVGVPKIV 194 (229)
T ss_dssp HHHHHTTCCSCEEEEEEECTTCTTHHHHHHH-H--HHHHHHC-TTEEEEEEEGGGCHHHHHH--------TTCCSSSEEE
T ss_pred HHHHHHhcCCCeEEEEEECCCCcchHHHHHH-H--HHHHHHC-CCeEEEEEECCCCHHHHHH--------cCCcccCEEE
Confidence 344444555665 33 4899999999832 2 2344333 4688889999998877665 6889999998
Q ss_pred EeCCCCcee
Q 005023 81 FLSPDLKPL 89 (718)
Q Consensus 81 fl~p~g~p~ 89 (718)
| +|++.
T Consensus 195 ~---~G~~~ 200 (229)
T 2ywm_A 195 I---NKGVA 200 (229)
T ss_dssp E---GGGTE
T ss_pred E---CCEEE
Confidence 8 88853
No 162
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=97.17 E-value=0.0004 Score=77.43 Aligned_cols=68 Identities=21% Similarity=0.308 Sum_probs=53.0
Q ss_pred hhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhc--ccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEe
Q 005023 8 GGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLND--WFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFL 82 (718)
Q Consensus 8 ~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~--~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl 82 (718)
...+++|++++ .+||..|+.|.... .++++.+.. +++.++||.+++ ++... +++.|+|+.+|+
T Consensus 365 ~~~~~~k~vlv~f~a~wC~~C~~~~p~~---~~l~~~~~~~~~v~~~~id~~~~-~~~~~--------~~v~~~Pt~~~~ 432 (481)
T 3f8u_A 365 IVNNENKDVLIEFYAPWCGHCKNLEPKY---KELGEKLSKDPNIVIAKMDATAN-DVPSP--------YEVRGFPTIYFS 432 (481)
T ss_dssp HHTCTTCEEEEEEECTTBHHHHHHHHHH---HHHHHHTTTCSSEEEEEEETTSS-CCCTT--------CCCCSSSEEEEE
T ss_pred HhhcCCCcEEEEEecCcChhHHHhhHHH---HHHHHHhccCCCEEEEEEECCch-hhHhh--------CCCcccCEEEEE
Confidence 33455898876 38999999998644 567777765 699999999987 65543 678999999999
Q ss_pred CCCCc
Q 005023 83 SPDLK 87 (718)
Q Consensus 83 ~p~g~ 87 (718)
.+.|+
T Consensus 433 ~~~~~ 437 (481)
T 3f8u_A 433 PANKK 437 (481)
T ss_dssp CTTCT
T ss_pred eCCCe
Confidence 88876
No 163
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=97.15 E-value=0.00052 Score=63.56 Aligned_cols=75 Identities=19% Similarity=0.160 Sum_probs=44.4
Q ss_pred CcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHH-----------------HHHHHhcCC
Q 005023 14 RTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYM-----------------TYVQALYGG 73 (718)
Q Consensus 14 K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~-----------------~~~q~~~g~ 73 (718)
|++++ .+||.+|+.|.... .++.+.++=.||.|-+|.++.++.-+.|. ..+...+|.
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l---~~l~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 107 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGL---HRVAEETGVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKV 107 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHH---HHHHHHHCCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSB
T ss_pred CeEEEEEEcccChhHHHHHHHH---HHHHHHcCCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCC
Confidence 77755 58999999987543 23333334445555554222222111110 111223678
Q ss_pred CCCCcEEEeCCCCceeec
Q 005023 74 GGWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 74 ~GwP~~vfl~p~g~p~~~ 91 (718)
.++|++++++++|+.+..
T Consensus 108 ~~~P~~~lid~~G~i~~~ 125 (154)
T 3ia1_A 108 LGQPWTFVVDREGKVVAL 125 (154)
T ss_dssp CSSCEEEEECTTSEEEEE
T ss_pred CcccEEEEECCCCCEEEE
Confidence 899999999999998864
No 164
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum}
Probab=97.15 E-value=0.0049 Score=68.84 Aligned_cols=182 Identities=20% Similarity=0.186 Sum_probs=108.9
Q ss_pred CCCcEEEEecCCCCCCCCCcchHHHHHHHHHHHHHH---HHccC-ChHHHHHHHHHHHHHHHhccCCCCceeeec-cCCc
Q 005023 229 VGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDA---FSLTK-DVFYSYICRDILDYLRRDMIGPGGEIFSAE-DADS 303 (718)
Q Consensus 229 v~GGF~RYsvD~~W~vPHFEKmLyDnA~ll~~ya~A---y~~t~-~~~y~~~A~~~~~~l~~~m~~p~Ggf~sa~-DADs 303 (718)
+-||+| |..=.+-+---|-|....|++.|.+. |...+ -+..++.++-.++||++ |...+|+||.-. |.+.
T Consensus 70 lsGGwy----DAGD~~Ky~~~~a~t~~~L~w~~~e~~~~~~~~~~~~d~ldeikwg~D~llk-~~~~~~~~y~qVgd~~~ 144 (466)
T 2xfg_A 70 LTGGWY----DAGDHVKFNLPMSYSAAMLGWAVYEYEDAFKQSGQYNHILNNIKWACDYFIK-CHPEKDVYYYQVGDGHA 144 (466)
T ss_dssp CCCSBC----CSSSCCEEHHHHHHHHHHHHHHHHHCHHHHHHTTCHHHHHHHHHHHHHHHHH-TCSBTTEEEEEESCHHH
T ss_pred CCCCce----eCCCCCeeccccHHHHHHHHHHHHHhHHHHhcCCCchHHHHHHHHHHHHHHH-hccCCCcEEEEeCCCCc
Confidence 678888 55434444456888888999888773 44433 48899999999999998 644446777632 2211
Q ss_pred ccccCcccccCCceEeechHHHHHHhchhHHHHHHHhcccCCCCcCCCCCCCCCCccCCcceeeccCCchHHHHhcCCCH
Q 005023 304 AETEGATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPL 383 (718)
Q Consensus 304 ~~~~~~~~~~EG~yY~Wt~~Ei~~~L~~~~~~~~~~~~v~~~Gn~~~~~~~dp~~~~eg~nvL~~~~~~~~~a~~~g~~~ 383 (718)
+ ...|.+-|+ |.. .+....+.
T Consensus 145 D------------h~~W~~pe~---------------------------~~~------~R~~y~i~-------------- 165 (466)
T 2xfg_A 145 D------------HAWWGPAEV---------------------------MPM------ERPSYKVD-------------- 165 (466)
T ss_dssp H------------HTCCSCGGG---------------------------CCS------CCCEEEEE--------------
T ss_pred c------------ccccCCccc---------------------------CCC------CCceeEec--------------
Confidence 1 011332110 000 01100000
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCCchhhhchHHHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHH
Q 005023 384 EKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASF 463 (718)
Q Consensus 384 ~~~~~~l~~~r~~L~~~R~~R~~P~~Ddkilt~WNgl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~ 463 (718)
...|. |+-.+.+++|||.|++++++- ...|. .++|+.|+++++|
T Consensus 166 --------------------~~~pg------sd~a~e~AAAlAaAS~vfk~~--D~~yA--------~~~L~~Ak~l~~f 209 (466)
T 2xfg_A 166 --------------------RSSPG------STVVAETSAALAIASIIFKKV--DGEYS--------KECLKHAKELFEF 209 (466)
T ss_dssp --------------------SSSCC------HHHHHHHHHHHHHHHHHTTTT--CHHHH--------HHHHHHHHHHHHH
T ss_pred --------------------CCCCc------cHHHHHHHHHHHHHHHhcccc--CHHHH--------HHHHHHHHHHHHH
Confidence 01122 333488999999999999751 11111 5789999999999
Q ss_pred HHHhccccCCCeEEEeecCCCC--CC-CCCcccHHHHHHHHHHHHHHcCChHHHHHHHHH
Q 005023 464 IRRHLYDEQTHRLQHSFRNGPS--KA-PGFLDDYAFLISGLLDLYEFGSGTKWLVWAIEL 520 (718)
Q Consensus 464 l~~~~~d~~~g~l~~~~~~g~~--~~-~~~l~DyA~li~all~LYeaTgd~~~L~~A~~L 520 (718)
..++--.- + ...+.. .. .++.| .+++|.++||.+|||..||+.|.+.
T Consensus 210 A~~~~~~~--~-----~~~~~~~Y~s~s~~~D---El~WAAawLy~ATgd~~Yl~~a~~~ 259 (466)
T 2xfg_A 210 ADTTKSDD--G-----YTAANGFYNSWSGFYD---ELSWAAVWLYLATNDSSYLDKAESY 259 (466)
T ss_dssp HHHHCCCT--T-----CCTTTTTSCCSSCSHH---HHHHHHHHHHHHHCCHHHHHHHHHT
T ss_pred HHhcCCcC--C-----CCccccccCCCCCCch---HHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 98874210 0 011111 11 23333 4589999999999999999999874
No 165
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=97.14 E-value=0.00047 Score=74.82 Aligned_cols=74 Identities=12% Similarity=0.257 Sum_probs=56.6
Q ss_pred hHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHh------hcccEEEEecCCCCcchHHHHHHHHHHhcCCC
Q 005023 4 RSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLL------NDWFVSIKVDREERPDVDKVYMTYVQALYGGG 74 (718)
Q Consensus 4 ~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~l------n~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~ 74 (718)
+.+..+.++++++++ .+||+.|+.|..+ | .++++.+ +..++.++||.++.+++.+. +|+.
T Consensus 13 ~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~-~--~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~--------~~v~ 81 (382)
T 2r2j_A 13 ENIDEILNNADVALVNFYADWCRFSQMLHPI-F--EEASDVIKEEFPNENQVVFARVDCDQHSDIAQR--------YRIS 81 (382)
T ss_dssp TTHHHHHHHCSEEEEEEECTTCHHHHHHHHH-H--HHHHHHHTTCC---CCEEEEEEETTTCHHHHHH--------TTCC
T ss_pred HHHHHHHhcCCeEEEEEECCCCHHHHHHHHH-H--HHHHHHHHhhcCCCCceEEEEEECCccHHHHHh--------cCCC
Confidence 345666678899876 3899999999964 3 4677777 34588999999998776654 6889
Q ss_pred CCCcEEEeCCCCcee
Q 005023 75 GWPLSVFLSPDLKPL 89 (718)
Q Consensus 75 GwP~~vfl~p~g~p~ 89 (718)
|+|+.+|+ .+|+++
T Consensus 82 ~~Pt~~~f-~~G~~~ 95 (382)
T 2r2j_A 82 KYPTLKLF-RNGMMM 95 (382)
T ss_dssp EESEEEEE-ETTEEE
T ss_pred cCCEEEEE-eCCcEe
Confidence 99999887 578865
No 166
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=97.14 E-value=0.0013 Score=63.20 Aligned_cols=80 Identities=16% Similarity=0.230 Sum_probs=45.9
Q ss_pred hhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhh-cccEEEEecCCCC-cchHHHHHHHHHH--------------
Q 005023 9 GTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLN-DWFVSIKVDREER-PDVDKVYMTYVQA-------------- 69 (718)
Q Consensus 9 Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln-~~Fv~vkvD~ee~-pd~d~~y~~~~q~-------------- 69 (718)
+.-.+|++++ ++||+.|+.+..+. .++.+.+. +++..|.|+.+.. ++.-..|.+....
T Consensus 56 ~~~~gk~vll~F~a~~C~~C~~~~~~l---~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 132 (186)
T 1jfu_A 56 SDFRGKTLLVNLWATWCVPCRKEMPAL---DELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVF 132 (186)
T ss_dssp GGGTTSEEEEEEECTTCHHHHHHHHHH---HHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHH
T ss_pred HHcCCCEEEEEEEeCCCHhHHHHHHHH---HHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHH
Confidence 3446788765 58999999877532 34445454 4555555554432 2222222221000
Q ss_pred -hcCC----CCCCcEEEeCCCCceeec
Q 005023 70 -LYGG----GGWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 70 -~~g~----~GwP~~vfl~p~g~p~~~ 91 (718)
.+|. .|+|++++++++|+.+..
T Consensus 133 ~~~~~~~~~~~~P~~~lid~~G~i~~~ 159 (186)
T 1jfu_A 133 QDLKAIGRALGMPTSVLVDPQGCEIAT 159 (186)
T ss_dssp HHHHTTTCCSSSSEEEEECTTSBEEEE
T ss_pred HHhccccccCCCCEEEEECCCCCEEEE
Confidence 0111 389999999999999853
No 167
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=97.06 E-value=0.00051 Score=73.50 Aligned_cols=74 Identities=18% Similarity=0.090 Sum_probs=56.4
Q ss_pred hHHhhhhhcCCcEEE---EcCCchhhhhhcc------ccCcHHHHHHhhc-ccEEEEecCCCCcchHHHHHHHHHHhcCC
Q 005023 4 RSFCGGTKTRRTHFL---INTCHWCHVMEVE------SFEDEGVAKLLND-WFVSIKVDREERPDVDKVYMTYVQALYGG 73 (718)
Q Consensus 4 ~a~~~Ak~e~K~ii~---y~~C~wChvM~~e------sf~d~~va~~ln~-~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~ 73 (718)
+-+..+.++++++++ .+||+ |+.|..+ +|+ ++++.+.. .+..++||.++.+++.+. +|+
T Consensus 19 ~~f~~~i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~--~~a~~~~~~~v~~~~Vd~~~~~~l~~~--------~~v 87 (350)
T 1sji_A 19 KNFKQVLKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLE--LVAQVLEHKDIGFVMVDAKKEAKLAKK--------LGF 87 (350)
T ss_dssp HHHHHHHTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHH--HHHHHGGGSSEEEEEEETTTTHHHHHH--------HTC
T ss_pred HHHHHHHhhCCeEEEEEECCCCc-chhhCchhhhhhHHHH--HHHHHHhhcCcEEEEEeCCCCHHHHHh--------cCC
Confidence 446667778899876 38999 9776543 244 67888876 588999999998776554 578
Q ss_pred CCCCcEEEeCCCCcee
Q 005023 74 GGWPLSVFLSPDLKPL 89 (718)
Q Consensus 74 ~GwP~~vfl~p~g~p~ 89 (718)
.|+|+.+|+ .+|++.
T Consensus 88 ~~~Pt~~~~-~~g~~~ 102 (350)
T 1sji_A 88 DEEGSLYVL-KGDRTI 102 (350)
T ss_dssp CSTTEEEEE-ETTEEE
T ss_pred CccceEEEE-ECCcEE
Confidence 999999999 688854
No 168
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=97.03 E-value=0.00022 Score=59.37 Aligned_cols=59 Identities=19% Similarity=0.198 Sum_probs=39.1
Q ss_pred EEEcCCchhhhhhccccCcHHHHHHhhc---ccEEEEecCC-CCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCceeecc
Q 005023 17 FLINTCHWCHVMEVESFEDEGVAKLLND---WFVSIKVDRE-ERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLMGG 92 (718)
Q Consensus 17 i~y~~C~wChvM~~esf~d~~va~~ln~---~Fv~vkvD~e-e~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p~~~~ 92 (718)
+..+||++|+.|.. .+.+++++ .|..++||.+ +.+++.+. +|..+.|+.++ +|+..+.|
T Consensus 7 f~~~~C~~C~~~~~------~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~--------~gv~~vPt~~i---~g~~~~~G 69 (80)
T 2k8s_A 7 FYHAGCPVCVSAEQ------AVANAIDPSKYTVEIVHLGTDKARIAEAEK--------AGVKSVPALVI---DGAAFHIN 69 (80)
T ss_dssp EEECSCHHHHHHHH------HHHHHSCTTTEEEEEEETTTCSSTHHHHHH--------HTCCEEEEEEE---TTEEEEEE
T ss_pred EeCCCCCchHHHHH------HHHHHHHhcCCeEEEEEecCChhhHHHHHH--------cCCCcCCEEEE---CCEEEEec
Confidence 45699999999984 23344443 4667777764 34433322 58889999877 88876543
No 169
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=96.07 E-value=0.0001 Score=67.28 Aligned_cols=80 Identities=21% Similarity=0.142 Sum_probs=46.4
Q ss_pred hcCC-cEEE---EcCCchhhhhhccccCcHHHHHHh---hcccEEEEecCCCCcchHHHHHH-----------------H
Q 005023 11 KTRR-THFL---INTCHWCHVMEVESFEDEGVAKLL---NDWFVSIKVDREERPDVDKVYMT-----------------Y 66 (718)
Q Consensus 11 ~e~K-~ii~---y~~C~wChvM~~esf~d~~va~~l---n~~Fv~vkvD~ee~pd~d~~y~~-----------------~ 66 (718)
-.+| ++++ .+||+.|+.|.... .++++.+ ++++..|.|+.++.++.-..|.+ .
T Consensus 23 ~~gk~~vll~F~a~wC~~C~~~~~~l---~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (143)
T 2lus_A 23 LKDKDIIGFYFSAHWCPPCRGFTPIL---ADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASN 99 (143)
Confidence 3466 7654 58999999877432 2333444 23455555555544321111110 1
Q ss_pred HHHhcCCCCCCcEEEeCCCCceeeccc
Q 005023 67 VQALYGGGGWPLSVFLSPDLKPLMGGT 93 (718)
Q Consensus 67 ~q~~~g~~GwP~~vfl~p~g~p~~~~~ 93 (718)
+...+|+.++|+++|++++|+++...+
T Consensus 100 ~~~~~~v~~~P~~~lid~~G~i~~~~~ 126 (143)
T 2lus_A 100 VTAKYGITGIPALVIVKKDGTLISMNG 126 (143)
Confidence 112357789999999999999986543
No 170
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=96.99 E-value=0.0029 Score=58.44 Aligned_cols=80 Identities=14% Similarity=0.076 Sum_probs=50.0
Q ss_pred hhcCCcEEE---EcCCch--hhhhhccccCcHHHHHHh-h-cccEEEEecCCCCcchHHHHHH-----------------
Q 005023 10 TKTRRTHFL---INTCHW--CHVMEVESFEDEGVAKLL-N-DWFVSIKVDREERPDVDKVYMT----------------- 65 (718)
Q Consensus 10 k~e~K~ii~---y~~C~w--ChvM~~esf~d~~va~~l-n-~~Fv~vkvD~ee~pd~d~~y~~----------------- 65 (718)
.-.+|++++ ++||.. |+.+... + .++.+.+ . +++..|.|+.++.++.-+.|.+
T Consensus 30 ~~~gk~vll~F~a~~C~~v~C~~~~~~-l--~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 106 (150)
T 3fw2_A 30 AFKQKSLLINFWASWNDSISQKQSNSE-L--REIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNS 106 (150)
T ss_dssp TTTTSEEEEEEECTTCCCHHHHHHHHH-H--HHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGC
T ss_pred hhCCCEEEEEEEeCCCCchHHHHHHHH-H--HHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccch
Confidence 346788866 489999 9987632 1 1233333 2 3366666666655432222221
Q ss_pred HHHHhcCCCCCCcEEEeCCCCceeecc
Q 005023 66 YVQALYGGGGWPLSVFLSPDLKPLMGG 92 (718)
Q Consensus 66 ~~q~~~g~~GwP~~vfl~p~g~p~~~~ 92 (718)
.+...+|..++|++++++++|+.+...
T Consensus 107 ~~~~~~~v~~~P~~~lid~~G~i~~~~ 133 (150)
T 3fw2_A 107 EVAKQYSIYKIPANILLSSDGKILAKN 133 (150)
T ss_dssp HHHHHTTCCSSSEEEEECTTSBEEEES
T ss_pred HHHHHcCCCccCeEEEECCCCEEEEcc
Confidence 222347889999999999999998654
No 171
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=96.97 E-value=0.0011 Score=74.35 Aligned_cols=73 Identities=18% Similarity=0.165 Sum_probs=57.3
Q ss_pred hHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhc-ccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcE
Q 005023 4 RSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLND-WFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLS 79 (718)
Q Consensus 4 ~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~-~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~ 79 (718)
+-+....++++++++ .+||+.|+.|..+- .++++.++. ++..++||.++.+++.+. +|+.|+|+.
T Consensus 22 ~~f~~~~~~~~~~lv~F~a~wC~~C~~~~p~~---~~~a~~~~~~~v~~~~vd~~~~~~l~~~--------~~v~~~Pt~ 90 (504)
T 2b5e_A 22 DSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEY---VKAAETLVEKNITLAQIDCTENQDLCME--------HNIPGFPSL 90 (504)
T ss_dssp TTHHHHHTTCSEEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTTCEEEEEETTTCHHHHHH--------TTCCSSSEE
T ss_pred HHHHHHHhcCCeEEEEEECCCCHHHHHhHHHH---HHHHHHhccCCeEEEEEECCCCHHHHHh--------cCCCcCCEE
Confidence 345666778899866 38999999999753 567888877 499999999998776554 688999999
Q ss_pred EEeCCCCce
Q 005023 80 VFLSPDLKP 88 (718)
Q Consensus 80 vfl~p~g~p 88 (718)
+|+. +|+.
T Consensus 91 ~~~~-~g~~ 98 (504)
T 2b5e_A 91 KIFK-NSDV 98 (504)
T ss_dssp EEEE-TTCT
T ss_pred EEEe-CCcc
Confidence 9986 4663
No 172
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=96.93 E-value=0.00094 Score=65.15 Aligned_cols=58 Identities=24% Similarity=0.368 Sum_probs=47.4
Q ss_pred CCchhhhhhccccCcHHHHHHhh-----cccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCcee
Q 005023 21 TCHWCHVMEVESFEDEGVAKLLN-----DWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPL 89 (718)
Q Consensus 21 ~C~wChvM~~esf~d~~va~~ln-----~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p~ 89 (718)
||..|+.|.. +| .+||+.+. ...+-+|||.++.|++.+. +|+.+.|+.+++-+.+.+-
T Consensus 55 wCgpCk~l~P-~~--e~lA~~~~~~~~~~~v~f~kvD~d~~~~la~~--------~~I~siPtl~~F~~g~~~~ 117 (178)
T 3ga4_A 55 SCQLCHDFEK-TY--HAVADVIRSQAPQSLNLFFTVDVNEVPQLVKD--------LKLQNVPHLVVYPPAESNK 117 (178)
T ss_dssp BCHHHHHHHH-HH--HHHHHHHHHHCTTCCEEEEEEETTTCHHHHHH--------TTCCSSCEEEEECCCCGGG
T ss_pred CChhHHHHHH-HH--HHHHHHhhhccCCCCEEEEEEECccCHHHHHH--------cCCCCCCEEEEEcCCCCCC
Confidence 9999999985 22 46666665 5678889999999988776 7899999999999877664
No 173
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=96.92 E-value=0.002 Score=59.00 Aligned_cols=77 Identities=8% Similarity=-0.029 Sum_probs=48.3
Q ss_pred hhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhc----ccEEEEecCCCCcchHHHHHH----------------
Q 005023 9 GTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLND----WFVSIKVDREERPDVDKVYMT---------------- 65 (718)
Q Consensus 9 Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~----~Fv~vkvD~ee~pd~d~~y~~---------------- 65 (718)
+.-.+|++++ .+||..|+.|. |.+.++.++ ++..|-|+.++.++.-..+.+
T Consensus 28 ~~~~gk~vll~F~a~wC~~C~~~~------~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 101 (143)
T 4fo5_A 28 HNQLGRYTLLNFWAAYDAESRARN------VQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGK 101 (143)
T ss_dssp CCSSCCEEEEEEECTTCHHHHHHH------HHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGG
T ss_pred HHhCCCEEEEEEEcCcCHHHHHHH------HHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeeccccc
Confidence 3346788866 48999998875 455555443 366666666544321111111
Q ss_pred --HHHHhcCCCCCCcEEEeCCCCceeec
Q 005023 66 --YVQALYGGGGWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 66 --~~q~~~g~~GwP~~vfl~p~g~p~~~ 91 (718)
.+...+|..++|++++++++|+.+..
T Consensus 102 ~~~~~~~~~v~~~P~~~lid~~G~i~~~ 129 (143)
T 4fo5_A 102 ESELYKKYDLRKGFKNFLINDEGVIIAA 129 (143)
T ss_dssp GSHHHHHTTGGGCCCEEEECTTSBEEEE
T ss_pred chHHHHHcCCCCCCcEEEECCCCEEEEc
Confidence 11123678899999999999999864
No 174
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=96.86 E-value=0.0021 Score=59.94 Aligned_cols=78 Identities=6% Similarity=0.034 Sum_probs=48.9
Q ss_pred hcCCcEEE---EcCCchhhhhhccccCcHHHHHHhh-cccEEEEecCCCCcchHHHHHH---------------HHHHhc
Q 005023 11 KTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLN-DWFVSIKVDREERPDVDKVYMT---------------YVQALY 71 (718)
Q Consensus 11 ~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln-~~Fv~vkvD~ee~pd~d~~y~~---------------~~q~~~ 71 (718)
-.+|++++ ++||..|..+... + .++.+.+. +++..|.|+.++.++.-+.|.. .+...+
T Consensus 33 ~~gk~vll~F~a~wC~~C~~~~~~-l--~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 109 (152)
T 2lrt_A 33 LKGKVVLIDFTVYNNAMSAAHNLA-L--RELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLY 109 (152)
T ss_dssp GGGSEEEEEEECTTCHHHHHHHHH-H--HHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHH
T ss_pred hCCCEEEEEEEcCCChhhHHHHHH-H--HHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHc
Confidence 35788765 5899999976532 2 23333333 3477777777665432222110 022346
Q ss_pred CCCCCCcEEEeCCCCceeec
Q 005023 72 GGGGWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 72 g~~GwP~~vfl~p~g~p~~~ 91 (718)
|..++|+++|++++|+++..
T Consensus 110 ~v~~~P~~~lid~~G~i~~~ 129 (152)
T 2lrt_A 110 NVTNLPSVFLVNRNNELSAR 129 (152)
T ss_dssp TCCSCSEEEEEETTTEEEEE
T ss_pred CcccCceEEEECCCCeEEEe
Confidence 88899999999999999864
No 175
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=96.79 E-value=0.0023 Score=57.11 Aligned_cols=80 Identities=14% Similarity=0.244 Sum_probs=47.9
Q ss_pred CchhHHhhhhhcCCcE-EEEcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcE
Q 005023 1 MGRRSFCGGTKTRRTH-FLINTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLS 79 (718)
Q Consensus 1 ~~~~a~~~Ak~e~K~i-i~y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~ 79 (718)
|+.+.+..+.++++.+ +..+||++|+.+.. .|+.-.+. +.+|..|.|| +.|+-.... ..+...+|..++|+.
T Consensus 7 ~~~~~~~~~i~~~~vv~f~~~~Cp~C~~~~~-~L~~~~~~---~~~~~~vdi~--~~~~~~~~~-~~l~~~~g~~~vP~v 79 (114)
T 2hze_A 7 MAEEFVQQRLANNKVTIFVKYTCPFCRNALD-ILNKFSFK---RGAYEIVDIK--EFKPENELR-DYFEQITGGKTVPRI 79 (114)
T ss_dssp CHHHHHHTTCCTTCEEEEECTTCHHHHHHHH-HHTTSCBC---TTSEEEEEGG--GSSSHHHHH-HHHHHHHSCCSSCEE
T ss_pred HHHHHHHHHhccCCEEEEEeCCChhHHHHHH-HHHHcCCC---cCceEEEEcc--CCCChHHHH-HHHHHHhCCCCcCEE
Confidence 6778888888887765 35699999998763 34332221 0116655554 444322222 222334789999975
Q ss_pred EEeCCCCceee
Q 005023 80 VFLSPDLKPLM 90 (718)
Q Consensus 80 vfl~p~g~p~~ 90 (718)
|+ +|+.+.
T Consensus 80 -~i--~g~~ig 87 (114)
T 2hze_A 80 -FF--GKTSIG 87 (114)
T ss_dssp -EE--TTEEEE
T ss_pred -EE--CCEEEe
Confidence 54 687763
No 176
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum}
Probab=96.76 E-value=0.0089 Score=68.98 Aligned_cols=86 Identities=12% Similarity=0.047 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEeecCCCC--CCCCCcccHH
Q 005023 418 NGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPS--KAPGFLDDYA 495 (718)
Q Consensus 418 Ngl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~~g~~--~~~~~l~DyA 495 (718)
.+.+++|||.|++++++- ...|. .++|+.|+++++|..++-- .+......+.. ...++.|
T Consensus 219 a~~~AAAlAaAS~vfk~~--D~~yA--------~~~L~~Ak~~~~fA~~~~~-----~y~~~~~~~~~~Y~ss~~~D--- 280 (611)
T 2yik_A 219 ISATAASLAINYMNFKDT--DPQYA--------AKSLDYAKALFDFAEKNPK-----GVVQGEDGPKGYYGSSKWQD--- 280 (611)
T ss_dssp HHHHHHHHHHHHHHHTTT--CHHHH--------HHHHHHHHHHHHHHHHSCC-----CCCCGGGTTTTTSCCCCSHH---
T ss_pred HHHHHHHHHHHHHhcccc--CHHHH--------HHHHHHHHHHHHHHHHcCC-----cccCCCcccCcCCCCCCccc---
Confidence 478999999999999751 11111 5789999999999987631 11111111111 1134444
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHH
Q 005023 496 FLISGLLDLYEFGSGTKWLVWAIELQ 521 (718)
Q Consensus 496 ~li~all~LYeaTgd~~~L~~A~~L~ 521 (718)
.+++|.++||.+|||..|++.|.+..
T Consensus 281 El~WAAawLy~ATgd~~Yl~~a~~~~ 306 (611)
T 2yik_A 281 DYCWAAAWLYLATQNEHYLDEAFKYY 306 (611)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 44789999999999999999998754
No 177
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=96.73 E-value=0.0027 Score=61.07 Aligned_cols=80 Identities=10% Similarity=0.064 Sum_probs=45.5
Q ss_pred hhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCC-------CcchHHHHHH-------------
Q 005023 9 GTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREE-------RPDVDKVYMT------------- 65 (718)
Q Consensus 9 Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee-------~pd~d~~y~~------------- 65 (718)
+.-.+|++++ ++||..|+.+... + .++.+.+.+.+..|.|+.+. .++.-..|.+
T Consensus 29 ~~~~gk~vlv~F~a~~C~~C~~~~~~-l--~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~ 105 (188)
T 2cvb_A 29 SQFHEPLLAVVFMCNHCPYVKGSIGE-L--VALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDET 105 (188)
T ss_dssp GGCCSSEEEEEEECSSCHHHHTTHHH-H--HHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSS
T ss_pred HHhCCCEEEEEEECCCCccHHHHHHH-H--HHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCc
Confidence 3445788765 4899999876532 1 22333333325555555421 1111111110
Q ss_pred -HHHHhcCCCCCCcEEEeCCCCceeec
Q 005023 66 -YVQALYGGGGWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 66 -~~q~~~g~~GwP~~vfl~p~g~p~~~ 91 (718)
.+...+|..++|+++|++++|+.++.
T Consensus 106 ~~~~~~~~v~~~P~~~lid~~G~i~~~ 132 (188)
T 2cvb_A 106 QEVAKAYRALRTPEVFLFDERRLLRYH 132 (188)
T ss_dssp SHHHHHTTCCEESEEEEECTTCBEEEE
T ss_pred chHHHHcCCCCCCeEEEECCCCcEEEE
Confidence 01223688899999999999999876
No 178
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=96.69 E-value=0.7 Score=50.59 Aligned_cols=152 Identities=14% Similarity=0.169 Sum_probs=98.4
Q ss_pred CchhhhchHHHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEeecCCCCCC--
Q 005023 410 DDKVIVSWNGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPSKA-- 487 (718)
Q Consensus 410 Ddkilt~WNgl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~~g~~~~-- 487 (718)
|+.-|..=|+||...|++- .+.. .++.++.+......-.+..||++++.|.=.+.||+...
T Consensus 292 d~~pl~~dn~La~l~l~~~---~~~~--------------d~~~l~W~i~gLka~~~yAYd~~~N~~~Pm~~dG~dltgy 354 (543)
T 2v8i_A 292 RTSTLYSENALMQLQLGKD---LGPQ--------------GQDLLKWTVDGLKAFAKYAYNDQDNTFRPMIANGQDLSNY 354 (543)
T ss_dssp HHHHHHTHHHHHHHHHHHH---HGGG--------------GHHHHHHHHHHHHHHHHHHEETTTTEECCEETTSCBCTTE
T ss_pred CCcceeecCHHHHHHHHHH---hcCc--------------hHHHHHHHHHHHHHHHHHhhccCCCceeecccCCcCCcCc
Confidence 4444555566666666554 3210 16788999888887788889998888877788875311
Q ss_pred ---------------CCCcccHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcccccCCccccCCCCCCcccccccc
Q 005023 488 ---------------PGFLDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKE 552 (718)
Q Consensus 488 ---------------~~~l~DyA~li~all~LYeaTgd~~~L~~A~~L~~~~~~~F~D~~~Gg~f~t~~~~~~l~~r~k~ 552 (718)
.++.-+-. ...+++..|.++.|+.-...+..++..+-- |.+=........+
T Consensus 355 ~l~RdGYYG~KGtvl~~~p~~~~-yll~~vra~~~s~D~~Lw~~~~~ma~~~~l-------gdi~~~~~~~~~~------ 420 (543)
T 2v8i_A 355 TLPRDGYYGKKGTVLKPYKAGNE-FLISYARAYAIDNDPLLWKVARGIANDQGL-------GDIGTAPGKEVKV------ 420 (543)
T ss_dssp ECSSCBTTBCTTCEECCEECCHH-HHHHHHHHHHHSCCHHHHHHHHHHHHHTTC-------EECTTBTTBSCEE------
T ss_pred ccccccccCCCCCeeccccCCch-hhHHHHHHHHcCCCHHHHHHHHHHHhhCCc-------cccCCCcCccccc------
Confidence 12222223 578999999999999988888877644311 1111111111111
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHH
Q 005023 553 DHDGAEPSGNSVSVINLVRLASIVAGSKSDYYRQNAEHSLAVFET 597 (718)
Q Consensus 553 ~~D~a~PS~ns~~a~~LlrL~~lt~~~~~~~y~e~a~~~l~~~~~ 597 (718)
+-..++....++.+|+.|++.|++ +.|++.|+++-..+..
T Consensus 421 --~~~~~~~sp~lL~allEL~~atq~---~~~l~lA~~~g~nl~~ 460 (543)
T 2v8i_A 421 --NMDTTNSDPYALFALLDLYHASQV---ADYRKLAEKIGDNIIK 460 (543)
T ss_dssp --CTTCCCCCHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHH
T ss_pred --ccCCCCcCHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHH
Confidence 223345556788899999999996 8999999887666544
No 179
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=96.68 E-value=0.0015 Score=61.45 Aligned_cols=73 Identities=11% Similarity=0.140 Sum_probs=46.1
Q ss_pred hHHhhhhhcCCcE-EEEcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCC-cchHHHHHHHHHHhcCCCCCCcEEE
Q 005023 4 RSFCGGTKTRRTH-FLINTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREER-PDVDKVYMTYVQALYGGGGWPLSVF 81 (718)
Q Consensus 4 ~a~~~Ak~e~K~i-i~y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~-pd~d~~y~~~~q~~~g~~GwP~~vf 81 (718)
+.++.+.++++.+ +..+||++|+.+.. +.+.++-.|..|.||.++. |++. ..+...+|..++|+.+
T Consensus 40 ~~~~~~i~~~~Vvvf~~~~Cp~C~~~k~-------~L~~~~i~~~~vdId~~~~~~~~~----~~L~~~~g~~tvP~if- 107 (146)
T 2ht9_A 40 NQIQETISDNCVVIFSKTSCSYCTMAKK-------LFHDMNVNYKVVELDLLEYGNQFQ----DALYKMTGERTVPRIF- 107 (146)
T ss_dssp HHHHHHHHHCSEEEEECTTCHHHHHHHH-------HHHHHTCCCEEEEGGGCTTHHHHH----HHHHHHHSCCCSCEEE-
T ss_pred HHHHHHhcCCCEEEEECCCChhHHHHHH-------HHHHcCCCeEEEECccCcCCHHHH----HHHHHHhCCCCcCeEE-
Confidence 4556666666554 34599999999873 3344566788777776522 3322 2233347899999874
Q ss_pred eCCCCceee
Q 005023 82 LSPDLKPLM 90 (718)
Q Consensus 82 l~p~g~p~~ 90 (718)
+ +|+.+.
T Consensus 108 i--~G~~ig 114 (146)
T 2ht9_A 108 V--NGTFIG 114 (146)
T ss_dssp E--TTEEEE
T ss_pred E--CCEEEe
Confidence 4 787763
No 180
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=96.68 E-value=0.0035 Score=71.12 Aligned_cols=69 Identities=12% Similarity=0.119 Sum_probs=52.3
Q ss_pred hhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhc---ccEEEEecCC--CCcchHHHHHHHHHHhcCCCCCCcEEE
Q 005023 10 TKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLND---WFVSIKVDRE--ERPDVDKVYMTYVQALYGGGGWPLSVF 81 (718)
Q Consensus 10 k~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~---~Fv~vkvD~e--e~pd~d~~y~~~~q~~~g~~GwP~~vf 81 (718)
.+.+|++++ .+||..|+.|...- .++++.+.. .+..++||.+ +.+++.+. +|+.|+|+++|
T Consensus 27 ~~~~k~vlV~FyA~WC~pCk~~~P~l---~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~--------~~V~~~PTl~~ 95 (519)
T 3t58_A 27 LGSSSAWAVEFFASWCGHAIAFAPTW---KELANDVKDWRPALNLAVLDCAEETNSAVCRE--------FNIAGFPTVRF 95 (519)
T ss_dssp SSCSSEEEEEEECTTSHHHHHHHHHH---HHHHHHHGGGTTTEEEEEEETTSGGGHHHHHH--------TTCCSBSEEEE
T ss_pred HhCCCeEEEEEECCCCHHHHHHHHHH---HHHHHHhhCcCCcEEEEEEECCccccHHHHHH--------cCCcccCEEEE
Confidence 355688876 38999999998644 667777776 6888899884 45555444 68899999999
Q ss_pred eCC---CCcee
Q 005023 82 LSP---DLKPL 89 (718)
Q Consensus 82 l~p---~g~p~ 89 (718)
+.+ +|+++
T Consensus 96 f~~g~~~G~~~ 106 (519)
T 3t58_A 96 FQAFTKNGSGA 106 (519)
T ss_dssp ECTTCCSCCCE
T ss_pred EcCcccCCCce
Confidence 998 66644
No 181
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=96.66 E-value=0.0034 Score=57.40 Aligned_cols=71 Identities=7% Similarity=-0.059 Sum_probs=53.4
Q ss_pred hhhhcCCcEEEE--cCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCC--CCcEEEeC
Q 005023 8 GGTKTRRTHFLI--NTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGG--WPLSVFLS 83 (718)
Q Consensus 8 ~Ak~e~K~ii~y--~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~G--wP~~vfl~ 83 (718)
+-.+.++|++.+ +.|..|+.|. ..| .++|+-+...+.-+|||.++.|++.+. +|..+ .|+.+++.
T Consensus 18 ~~~~~~~pv~v~f~a~~~~c~~~~-p~l--~~~A~~~~gk~~f~~vd~d~~~~~a~~--------~gi~~~~iPtl~i~~ 86 (133)
T 2djk_A 18 DYMSAGIPLAYIFAETAEERKELS-DKL--KPIAEAQRGVINFGTIDAKAFGAHAGN--------LNLKTDKFPAFAIQE 86 (133)
T ss_dssp HHHHTTSCEEEEECSCSSSHHHHH-HHH--HHHHHSSTTTSEEEEECTTTTGGGTTT--------TTCCSSSSSEEEEEC
T ss_pred HHhcCCCCEEEEEecChhhHHHHH-HHH--HHHHHHhCCeEEEEEEchHHhHHHHHH--------cCCCcccCCEEEEEe
Confidence 334567888764 4499999776 444 457777766689999999999988765 67788 99999998
Q ss_pred C-CCcee
Q 005023 84 P-DLKPL 89 (718)
Q Consensus 84 p-~g~p~ 89 (718)
. +|+..
T Consensus 87 ~~~g~~~ 93 (133)
T 2djk_A 87 VAKNQKF 93 (133)
T ss_dssp TTTCCBC
T ss_pred cCcCccc
Confidence 4 67764
No 182
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=96.59 E-value=0.0028 Score=66.63 Aligned_cols=71 Identities=20% Similarity=0.284 Sum_probs=50.2
Q ss_pred HHhhhh-hcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCC--CCcchHHHHHHHHHHhcCCCCCCc
Q 005023 5 SFCGGT-KTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDRE--ERPDVDKVYMTYVQALYGGGGWPL 78 (718)
Q Consensus 5 a~~~Ak-~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~e--e~pd~d~~y~~~~q~~~g~~GwP~ 78 (718)
-++... +.+|++++ .+||..|+.|..+- .++++.++..+..++||.+ +.+++.+. +|+.|+|+
T Consensus 26 ~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~---~~la~~~~~~~~~~~v~~d~~~~~~l~~~--------~~I~~~Pt 94 (298)
T 3ed3_A 26 SFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTF---RKAAKRLDGVVQVAAVNCDLNKNKALCAK--------YDVNGFPT 94 (298)
T ss_dssp HHHHHHTSSSSCEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTSEEEEEETTSTTTHHHHHH--------TTCCBSSE
T ss_pred HHHHHHHhCCCeEEEEEECCCCHHHHHHHHHH---HHHHHHccCCcEEEEEEccCccCHHHHHh--------CCCCccce
Confidence 344444 46888866 38999999998644 5778888766666666555 55555443 68899999
Q ss_pred EEEeCCCC
Q 005023 79 SVFLSPDL 86 (718)
Q Consensus 79 ~vfl~p~g 86 (718)
.+|+.+.+
T Consensus 95 ~~~~~~g~ 102 (298)
T 3ed3_A 95 LMVFRPPK 102 (298)
T ss_dssp EEEEECCC
T ss_pred EEEEECCc
Confidence 99998643
No 183
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=96.59 E-value=0.0033 Score=56.59 Aligned_cols=78 Identities=9% Similarity=0.038 Sum_probs=53.7
Q ss_pred hHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCC-CCCcE
Q 005023 4 RSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGG-GWPLS 79 (718)
Q Consensus 4 ~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~-GwP~~ 79 (718)
+.+++..+++||+++ ..||+.|+.|.. .|+. .++ ..+.-.++||+++.+++....-. -+|+. .-|+.
T Consensus 15 e~f~~ii~~~~~vvi~khatwCgpc~~~~~-~~e~--~~~--~~~v~~~~vdVde~r~~Sn~IA~----~~~V~h~sPq~ 85 (112)
T 3iv4_A 15 DQFEQVIEENKYVFVLKHSETCPISANAYD-QFNK--FLY--ERDMDGYYLIVQQERDLSDYIAK----KTNVKHESPQA 85 (112)
T ss_dssp HHHHHHHHHCSEEEEEEECTTCHHHHHHHH-HHHH--HHH--HHTCCEEEEEGGGGHHHHHHHHH----HHTCCCCSSEE
T ss_pred HHHHHHHhcCCCEEEEEECCcCHhHHHHHH-HHHH--Hhc--cCCceEEEEEeecCchhhHHHHH----HhCCccCCCeE
Confidence 457777778999977 369999999884 2322 222 24566778888888775322111 16776 59999
Q ss_pred EEeCCCCceeec
Q 005023 80 VFLSPDLKPLMG 91 (718)
Q Consensus 80 vfl~p~g~p~~~ 91 (718)
+++ .+|++++-
T Consensus 86 il~-k~G~~v~~ 96 (112)
T 3iv4_A 86 FYF-VNGEMVWN 96 (112)
T ss_dssp EEE-ETTEEEEE
T ss_pred EEE-ECCEEEEE
Confidence 888 59999974
No 184
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=96.56 E-value=0.0033 Score=70.47 Aligned_cols=65 Identities=17% Similarity=0.235 Sum_probs=49.3
Q ss_pred hhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhh---cccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeC
Q 005023 10 TKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLN---DWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLS 83 (718)
Q Consensus 10 k~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln---~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~ 83 (718)
.+++|++++ .+||+.|+.|.... .++++.+. .+++.++||.++++... +++.|+|+.+|+
T Consensus 373 ~~~~k~vlv~F~a~wC~~C~~~~p~~---~~l~~~~~~~~~~v~~~~vd~~~~~~~~----------~~v~~~Pt~~~~- 438 (504)
T 2b5e_A 373 NDPKKDVLVLYYAPWCGHCKRLAPTY---QELADTYANATSDVLIAKLDHTENDVRG----------VVIEGYPTIVLY- 438 (504)
T ss_dssp HCTTCCEEEEEECTTCHHHHHHHHHH---HHHHHHHHHHCSSCEEEEEEGGGCCCSS----------CCCSSSSEEEEE-
T ss_pred ccCCCCEEEEEECCCChhHHHHhHHH---HHHHHHhhccCCcEEEEEecCCcccccc----------CCceecCeEEEE-
Confidence 456888876 38999999998643 35565554 37999999998875431 467899999999
Q ss_pred CCCce
Q 005023 84 PDLKP 88 (718)
Q Consensus 84 p~g~p 88 (718)
++|+.
T Consensus 439 ~~G~~ 443 (504)
T 2b5e_A 439 PGGKK 443 (504)
T ss_dssp CCTTS
T ss_pred eCCce
Confidence 78875
No 185
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=96.53 E-value=0.0022 Score=71.45 Aligned_cols=73 Identities=19% Similarity=0.216 Sum_probs=56.9
Q ss_pred HHhhhhhcC---CcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCc
Q 005023 5 SFCGGTKTR---RTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPL 78 (718)
Q Consensus 5 a~~~Ak~e~---K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~ 78 (718)
-+....+++ +++++ .+||+.|+.|..+- .++++.+...+..++||.++.+++.+. +|+.|+|+
T Consensus 10 ~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~---~~~a~~~~~~v~~~~vd~~~~~~l~~~--------~~v~~~Pt 78 (481)
T 3f8u_A 10 NFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEY---EAAATRLKGIVPLAKVDCTANTNTCNK--------YGVSGYPT 78 (481)
T ss_dssp THHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHH---HHHHHHTTTTCCEEEEETTTCHHHHHH--------TTCCEESE
T ss_pred HHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHH---HHHHHHhcCceEEEEEECCCCHHHHHh--------cCCCCCCE
Confidence 345555555 88866 38999999999743 678888888788889999998877665 68899998
Q ss_pred EEEeCCCCcee
Q 005023 79 SVFLSPDLKPL 89 (718)
Q Consensus 79 ~vfl~p~g~p~ 89 (718)
.+|+ .+|+..
T Consensus 79 l~~~-~~g~~~ 88 (481)
T 3f8u_A 79 LKIF-RDGEEA 88 (481)
T ss_dssp EEEE-ETTEEE
T ss_pred EEEE-eCCcee
Confidence 8888 577654
No 186
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.52 E-value=0.0046 Score=56.68 Aligned_cols=72 Identities=10% Similarity=0.122 Sum_probs=45.3
Q ss_pred hHHhhhhhcCCcEE-EEcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCC-cchHHHHHHHHHHhcCCCCCCcEEE
Q 005023 4 RSFCGGTKTRRTHF-LINTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREER-PDVDKVYMTYVQALYGGGGWPLSVF 81 (718)
Q Consensus 4 ~a~~~Ak~e~K~ii-~y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~-pd~d~~y~~~~q~~~g~~GwP~~vf 81 (718)
+.+..+.++++.++ ...||++|+.|.. +.+.++-.|..|.||.++. |++ +..+...+|..++|+.+
T Consensus 18 ~~~~~~i~~~~vvvf~~~~Cp~C~~~~~-------~L~~~~i~~~~vdid~~~~~~~~----~~~l~~~~g~~~vP~l~- 85 (130)
T 2cq9_A 18 NQIQETISDNCVVIFSKTSCSYCTMAKK-------LFHDMNVNYKVVELDLLEYGNQF----QDALYKMTGERTVPRIF- 85 (130)
T ss_dssp HHHHHHHHHSSEEEEECSSCSHHHHHHH-------HHHHHTCCCEEEETTTSTTHHHH----HHHHHHHHSSCCSSEEE-
T ss_pred HHHHHHHcCCcEEEEEcCCChHHHHHHH-------HHHHcCCCcEEEECcCCcCcHHH----HHHHHHHhCCCCcCEEE-
Confidence 44566666665543 4589999999874 3334566787777776532 332 22233447889999874
Q ss_pred eCCCCcee
Q 005023 82 LSPDLKPL 89 (718)
Q Consensus 82 l~p~g~p~ 89 (718)
+ +|+.+
T Consensus 86 i--~G~~i 91 (130)
T 2cq9_A 86 V--NGTFI 91 (130)
T ss_dssp E--TTEEE
T ss_pred E--CCEEE
Confidence 4 67766
No 187
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=96.51 E-value=0.0037 Score=60.34 Aligned_cols=22 Identities=27% Similarity=0.330 Sum_probs=19.3
Q ss_pred cCCCCCCcEEEeCCCCceeecc
Q 005023 71 YGGGGWPLSVFLSPDLKPLMGG 92 (718)
Q Consensus 71 ~g~~GwP~~vfl~p~g~p~~~~ 92 (718)
+|..++|+++|++++|+.++.+
T Consensus 126 ~~v~~~P~~~lid~~G~i~~~~ 147 (196)
T 2ywi_A 126 YDAACTPDFYIFDRDLKCVYRG 147 (196)
T ss_dssp HTCCEESEEEEEETTCBEEEEE
T ss_pred hCCCCCCeEEEEcCCCeEEEcc
Confidence 5788999999999999998753
No 188
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=96.50 E-value=0.0038 Score=67.32 Aligned_cols=81 Identities=12% Similarity=0.072 Sum_probs=49.5
Q ss_pred hhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhh-cccEEEEecCCCC-----cchHHHHHH-------------
Q 005023 8 GGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLN-DWFVSIKVDREER-----PDVDKVYMT------------- 65 (718)
Q Consensus 8 ~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln-~~Fv~vkvD~ee~-----pd~d~~y~~------------- 65 (718)
.+.-.+|++|+ .+||..|+.|.... .++++.+. +++..|.|+.++. |+.-+.|.+
T Consensus 77 Lsdl~GK~vLl~F~atwC~~C~~~~p~L---~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~ 153 (352)
T 2hyx_A 77 LKSLRGKVVLIDFWAYSCINCQRAIPHV---VGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNN 153 (352)
T ss_dssp GGGGTTSEEEEEEECTTCHHHHHHHHHH---HHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTT
T ss_pred HHHhCCCEEEEEEECCCChhHHHHHHHH---HHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCc
Confidence 34445888866 48999999876432 23444443 3577777776432 211111110
Q ss_pred -HHHHhcCCCCCCcEEEeCCCCceeec
Q 005023 66 -YVQALYGGGGWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 66 -~~q~~~g~~GwP~~vfl~p~g~p~~~ 91 (718)
.+...+++.++|+++|++++|+++..
T Consensus 154 ~~l~~~ygV~~~Pt~~lID~~G~Iv~~ 180 (352)
T 2hyx_A 154 YATWTNYRNRYWPAEYLIDATGTVRHI 180 (352)
T ss_dssp SHHHHHTTCCEESEEEEECTTSBEEEE
T ss_pred HHHHHHcCCCccCEEEEEeCCCeEEEE
Confidence 11123688899999999999999864
No 189
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=96.50 E-value=0.0038 Score=63.51 Aligned_cols=58 Identities=19% Similarity=0.219 Sum_probs=42.8
Q ss_pred EcCCchhhhhhccccCcHHHHHHh---h-cccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCceee
Q 005023 19 INTCHWCHVMEVESFEDEGVAKLL---N-DWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLM 90 (718)
Q Consensus 19 y~~C~wChvM~~esf~d~~va~~l---n-~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p~~ 90 (718)
.+||++|+.|... + .+++... + .++..++||.++.|++.+. +|+.|+|+++| +|++++
T Consensus 147 a~wC~~C~~~~p~-l--~~la~~~~~~~~~~v~~~~vd~~~~~~~~~~--------~~V~~vPt~~i---~G~~~~ 208 (243)
T 2hls_A 147 TPSCPYCPYAVLL-A--HMFAYEAWKQGNPVILSEAVEAYENPDIADK--------YGVMSVPSIAI---NGYLVF 208 (243)
T ss_dssp CSSCSSHHHHHHH-H--HHHHHHHHHTTCCCEEEEEEETTTCHHHHHH--------TTCCSSSEEEE---TTEEEE
T ss_pred CCCCCCcHHHHHH-H--HHHHHHcccccCCcEEEEEEECccCHHHHHH--------cCCeeeCeEEE---CCEEEE
Confidence 4899999998743 2 2344443 1 5678889999998876554 68889999988 888764
No 190
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=96.43 E-value=0.002 Score=72.01 Aligned_cols=66 Identities=15% Similarity=0.095 Sum_probs=50.5
Q ss_pred hcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhc--------ccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcE
Q 005023 11 KTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLND--------WFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLS 79 (718)
Q Consensus 11 ~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~--------~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~ 79 (718)
..+|++|+ .+||..|+.|.... .++++.++. .++.++||.++.+++.+. +|+.|+|++
T Consensus 40 ~~~k~VlV~FyA~WC~pCk~~~P~l---~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~--------y~V~~~PTl 108 (470)
T 3qcp_A 40 APLCPWIVLFYNDGCGACRRYASTF---SKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRK--------YDINFVPRL 108 (470)
T ss_dssp GGGSCEEEEEECTTCHHHHHHHHHH---HHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHH--------TTCCSSCEE
T ss_pred CCCCeEEEEEECCCCHHHHHHHHHH---HHHHHHHhhhcccccCceEEEEEEECCCCHHHHHH--------cCCCccCeE
Confidence 34578876 38999999998543 456665541 489999999998776655 688999999
Q ss_pred EEeCCCCc
Q 005023 80 VFLSPDLK 87 (718)
Q Consensus 80 vfl~p~g~ 87 (718)
+|+.+.|.
T Consensus 109 ilf~~gg~ 116 (470)
T 3qcp_A 109 FFFYPRDS 116 (470)
T ss_dssp EEEEESSC
T ss_pred EEEECCCc
Confidence 99987764
No 191
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=96.39 E-value=0.0057 Score=53.15 Aligned_cols=73 Identities=16% Similarity=0.283 Sum_probs=42.7
Q ss_pred hHHhhhhhcCCcE-EEEcCCchhhhhhccccCcHHHHHHhhcc---cEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcE
Q 005023 4 RSFCGGTKTRRTH-FLINTCHWCHVMEVESFEDEGVAKLLNDW---FVSIKVDREERPDVDKVYMTYVQALYGGGGWPLS 79 (718)
Q Consensus 4 ~a~~~Ak~e~K~i-i~y~~C~wChvM~~esf~d~~va~~ln~~---Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~ 79 (718)
+-++...++++.+ +..+||++|+.|.. . -+.++.. |..|.||.+ |+-... ...+...+|..++|+.
T Consensus 3 ~~~~~~i~~~~v~~f~~~~C~~C~~~~~-~------L~~~~~~~~~~~~vdi~~~--~~~~~~-~~~l~~~~g~~~vP~i 72 (105)
T 1kte_A 3 AFVNSKIQPGKVVVFIKPTCPFCRKTQE-L------LSQLPFKEGLLEFVDITAT--SDTNEI-QDYLQQLTGARTVPRV 72 (105)
T ss_dssp HHHHHHCCTTCEEEEECSSCHHHHHHHH-H------HHHSCBCTTSEEEEEGGGS--TTHHHH-HHHHHHHHSCCCSCEE
T ss_pred hHHHhhcccCCEEEEEcCCCHhHHHHHH-H------HHHcCCCCCccEEEEccCC--CCHHHH-HHHHHHHhCCCCcCeE
Confidence 4566666666654 34699999998763 2 2233434 666655554 322221 1222334788999996
Q ss_pred EEeCCCCcee
Q 005023 80 VFLSPDLKPL 89 (718)
Q Consensus 80 vfl~p~g~p~ 89 (718)
|. +|+.+
T Consensus 73 -~~--~g~~i 79 (105)
T 1kte_A 73 -FI--GKECI 79 (105)
T ss_dssp -EE--TTEEE
T ss_pred -EE--CCEEE
Confidence 44 67766
No 192
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=96.35 E-value=0.0041 Score=73.61 Aligned_cols=71 Identities=13% Similarity=0.031 Sum_probs=56.4
Q ss_pred hhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCC
Q 005023 8 GGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSP 84 (718)
Q Consensus 8 ~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p 84 (718)
...+.+|++++ .+||..|+.|.... .++++.+..+++.++||.++.|++.+. +|+.|+|+++|+ +
T Consensus 670 ~~~~~~~~v~v~F~a~wC~~C~~~~p~~---~~la~~~~~~~~~~~vd~~~~~~~~~~--------~~v~~~Pt~~~~-~ 737 (780)
T 3apo_A 670 KVLQGKTHWVVDFYAPWSGPSQNFAPEF---ELLARMIKGKVRAGKVDCQAYPQTCQK--------AGIKAYPSVKLY-Q 737 (780)
T ss_dssp HTTTCSSCEEEEEECTTCHHHHHHHHHH---HHHHHHHTTTCEEEEEETTTCHHHHHH--------TTCCSSSEEEEE-E
T ss_pred HHhcCCCeEEEEEECCCCHHHHHHHHHH---HHHHHHhcCCceEEEEECCCCHHHHHh--------cCCCcCCEEEEE-c
Confidence 35567888866 38999999988543 567777777899999999998876554 688999999999 8
Q ss_pred CCceee
Q 005023 85 DLKPLM 90 (718)
Q Consensus 85 ~g~p~~ 90 (718)
+|+.+.
T Consensus 738 ~g~~~~ 743 (780)
T 3apo_A 738 YERAKK 743 (780)
T ss_dssp EETTTT
T ss_pred CCCccc
Confidence 888763
No 193
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=96.29 E-value=0.0083 Score=56.28 Aligned_cols=78 Identities=12% Similarity=-0.003 Sum_probs=44.1
Q ss_pred hcCCcEEE---EcCCch-hhhhhccccCcHHHHHHhh-----cccEEEEecCCC---CcchHHHHHH-------------
Q 005023 11 KTRRTHFL---INTCHW-CHVMEVESFEDEGVAKLLN-----DWFVSIKVDREE---RPDVDKVYMT------------- 65 (718)
Q Consensus 11 ~e~K~ii~---y~~C~w-ChvM~~esf~d~~va~~ln-----~~Fv~vkvD~ee---~pd~d~~y~~------------- 65 (718)
-.+|++++ ++||.. |..+... | .++.+.+. +++..|.|+.+. .|+.-+.|++
T Consensus 24 ~~gk~vll~F~~~~C~~~C~~~~~~-l--~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~ 100 (171)
T 2rli_A 24 FRGQWVLMYFGFTHCPDICPDELEK-L--VQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGST 100 (171)
T ss_dssp TTTSEEEEEEECTTCSSSHHHHHHH-H--HHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCH
T ss_pred hCCCEEEEEEEcCCCCchhHHHHHH-H--HHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCH
Confidence 35788765 589998 9876532 2 23444442 344444444432 2221111111
Q ss_pred ----HHHHhcCCCCCC---------------cEEEeCCCCceeec
Q 005023 66 ----YVQALYGGGGWP---------------LSVFLSPDLKPLMG 91 (718)
Q Consensus 66 ----~~q~~~g~~GwP---------------~~vfl~p~g~p~~~ 91 (718)
.+...+|..+.| ++++++++|+....
T Consensus 101 ~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~ 145 (171)
T 2rli_A 101 KQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDY 145 (171)
T ss_dssp HHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEE
T ss_pred HHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEE
Confidence 111236777777 89999999999864
No 194
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=96.28 E-value=0.0056 Score=62.80 Aligned_cols=69 Identities=10% Similarity=0.092 Sum_probs=50.4
Q ss_pred HHhhhhhcCCcEEEEcC--CchhhhhhccccCcHHHHHHhh---cccEEEEecCCC-----CcchHHHHHHHHHHhcCCC
Q 005023 5 SFCGGTKTRRTHFLINT--CHWCHVMEVESFEDEGVAKLLN---DWFVSIKVDREE-----RPDVDKVYMTYVQALYGGG 74 (718)
Q Consensus 5 a~~~Ak~e~K~ii~y~~--C~wChvM~~esf~d~~va~~ln---~~Fv~vkvD~ee-----~pd~d~~y~~~~q~~~g~~ 74 (718)
-+....++++++++..| +.||. |.. .| .++|+.+. .+++.++||.++ .|++... +|+.
T Consensus 25 nF~~vi~~~~~vlV~Fy~~ApWCg-l~P-~~--e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~--------~~V~ 92 (248)
T 2c0g_A 25 SFEKTVERFPYSVVKFDIASPYGE-KHE-AF--TAFSKSAHKATKDLLIATVGVKDYGELENKALGDR--------YKVD 92 (248)
T ss_dssp THHHHHTTSSEEEEEEEESSCCSH-HHH-HH--HHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHH--------TTCC
T ss_pred HHHHHHhcCCCEEEEEECCCCCCc-cHH-HH--HHHHHHHhccCCCeEEEEEECCcccccccHHHHHH--------hCCC
Confidence 34455577889988666 88887 553 34 35676663 468899999887 6666554 6888
Q ss_pred --CCCcEEEeCCCCc
Q 005023 75 --GWPLSVFLSPDLK 87 (718)
Q Consensus 75 --GwP~~vfl~p~g~ 87 (718)
|+||.+|+. |+
T Consensus 93 ~~~~PTl~~F~--G~ 105 (248)
T 2c0g_A 93 DKNFPSIFLFK--GN 105 (248)
T ss_dssp TTSCCEEEEES--SS
T ss_pred cCCCCeEEEEe--CC
Confidence 999999996 76
No 195
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=96.25 E-value=0.0039 Score=55.69 Aligned_cols=58 Identities=17% Similarity=0.276 Sum_probs=38.3
Q ss_pred EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCceeec
Q 005023 19 INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 19 y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p~~~ 91 (718)
.+||++|+.|..- + .++++..+ +-..+||.++.|++... +|.. .|+.+|+. +|+++..
T Consensus 37 ~~~C~~C~~a~~~-L--~~l~~e~~--i~~~~vDId~d~~l~~~--------ygv~-VP~l~~~~-dG~~v~~ 94 (107)
T 2fgx_A 37 REGCHLCEEMIAS-L--RVLQKKSW--FELEVINIDGNEHLTRL--------YNDR-VPVLFAVN-EDKELCH 94 (107)
T ss_dssp CSSCHHHHHHHHH-H--HHHHHHSC--CCCEEEETTTCHHHHHH--------STTS-CSEEEETT-TTEEEEC
T ss_pred CCCChhHHHHHHH-H--HHHHHhcC--CeEEEEECCCCHHHHHH--------hCCC-CceEEEEE-CCEEEEe
Confidence 4799999998742 2 22222233 55567888888876554 5665 99887664 7888743
No 196
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=96.23 E-value=0.012 Score=56.92 Aligned_cols=21 Identities=19% Similarity=-0.001 Sum_probs=17.8
Q ss_pred cCCCCCC------cEEEeCCCCceeec
Q 005023 71 YGGGGWP------LSVFLSPDLKPLMG 91 (718)
Q Consensus 71 ~g~~GwP------~~vfl~p~g~p~~~ 91 (718)
+|..|.| ++++++++|+++..
T Consensus 140 ~~v~~~P~i~~~~~~~lid~~G~i~~~ 166 (190)
T 2vup_A 140 PGILKTKAIKWNFTSFLIDRDGVPVER 166 (190)
T ss_dssp CCGGGCCSCCSTTCEEEECTTSCEEEE
T ss_pred CCcCCCccccccceEEEECCCCcEEEE
Confidence 3677899 99999999999864
No 197
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=96.22 E-value=0.003 Score=64.66 Aligned_cols=65 Identities=9% Similarity=0.059 Sum_probs=46.2
Q ss_pred cCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCce
Q 005023 12 TRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKP 88 (718)
Q Consensus 12 e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p 88 (718)
.+|+||+ .+||..|+.|... | .++++... ++..++||.++ +++... +++.|+|+.+|+. +|++
T Consensus 132 ~~k~VvV~Fya~wC~~Ck~l~p~-l--~~La~~~~-~v~f~kVd~d~-~~l~~~--------~~I~~~PTll~~~-~G~~ 197 (245)
T 1a0r_P 132 KITTIVVHIYEDGIKGCDALNSS-L--ICLAAEYP-MVKFCKIKASN-TGAGDR--------FSSDVLPTLLVYK-GGEL 197 (245)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHH-H--HHHHHHCT-TSEEEEEEHHH-HCCTTS--------SCTTTCSEEEEEE-TTEE
T ss_pred CCCEEEEEEECCCChHHHHHHHH-H--HHHHHHCC-CCEEEEEeCCc-HHHHHH--------CCCCCCCEEEEEE-CCEE
Confidence 3788866 3899999999853 2 23444433 47788888876 554433 5788999998885 9998
Q ss_pred ee
Q 005023 89 LM 90 (718)
Q Consensus 89 ~~ 90 (718)
+.
T Consensus 198 v~ 199 (245)
T 1a0r_P 198 LS 199 (245)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 198
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=96.18 E-value=0.016 Score=54.08 Aligned_cols=18 Identities=6% Similarity=-0.014 Sum_probs=15.6
Q ss_pred CCCC---cEEEeCCCCceeec
Q 005023 74 GGWP---LSVFLSPDLKPLMG 91 (718)
Q Consensus 74 ~GwP---~~vfl~p~g~p~~~ 91 (718)
.+.| ++++++++|+++..
T Consensus 129 ~~~p~~~~~~lid~~G~i~~~ 149 (170)
T 2p5q_A 129 DDIQWNFAKFLVNKDGQVVDR 149 (170)
T ss_dssp SCCCSTTCEEEECTTSCEEEE
T ss_pred CcccccccEEEECCCCCEEEe
Confidence 5678 99999999999864
No 199
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=96.14 E-value=0.0087 Score=59.15 Aligned_cols=56 Identities=20% Similarity=0.310 Sum_probs=41.2
Q ss_pred c-CCchhhhhhccccCcHHHHHHhhcccEEEEecCCC--CcchHHHHHHHHHHhcCCCCCCcEEEeCCCCce
Q 005023 20 N-TCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREE--RPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKP 88 (718)
Q Consensus 20 ~-~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee--~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p 88 (718)
+ ||++|+.|... ++ ++++. +.++..++||.++ .+++.+. +|+.++|+.+|+ .+|+.
T Consensus 32 ~~~C~~C~~~~~~-~~--~la~~-~~~v~~~~vd~~~~~~~~~~~~--------~~v~~~Pt~~~~-~~g~~ 90 (226)
T 1a8l_A 32 KDHCQYCDQLKQL-VQ--ELSEL-TDKLSYEIVDFDTPEGKELAKR--------YRIDRAPATTIT-QDGKD 90 (226)
T ss_dssp SSSCTTHHHHHHH-HH--HHHTT-CTTEEEEEEETTSHHHHHHHHH--------TTCCSSSEEEEE-ETTBC
T ss_pred CCCCchhHHHHHH-HH--HHHhh-CCceEEEEEeCCCcccHHHHHH--------cCCCcCceEEEE-cCCce
Confidence 6 99999999864 33 35544 5667888999987 6666554 688899999998 45643
No 200
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=96.14 E-value=0.016 Score=57.47 Aligned_cols=55 Identities=18% Similarity=0.084 Sum_probs=39.9
Q ss_pred CCchhhhhhccccCcHHHHHHh--hcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeC
Q 005023 21 TCHWCHVMEVESFEDEGVAKLL--NDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLS 83 (718)
Q Consensus 21 ~C~wChvM~~esf~d~~va~~l--n~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~ 83 (718)
||+||..+..-.=+=.++++.+ +.....++||.++.+++.+. +|+.|+|+.+|+.
T Consensus 33 ~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~--------~~v~~~Ptl~~~~ 89 (229)
T 2ywm_A 33 GCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEK--------YGVDRVPTIVIEG 89 (229)
T ss_dssp TCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHH--------TTCCBSSEEEEES
T ss_pred CCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHH--------cCCCcCcEEEEEC
Confidence 5888877765322223344444 56677889999999888766 7889999999996
No 201
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=96.12 E-value=0.011 Score=55.94 Aligned_cols=21 Identities=14% Similarity=-0.039 Sum_probs=18.4
Q ss_pred cCCCCCC------cEEEeCCCCceeec
Q 005023 71 YGGGGWP------LSVFLSPDLKPLMG 91 (718)
Q Consensus 71 ~g~~GwP------~~vfl~p~g~p~~~ 91 (718)
+|..|.| ++++++++|+++..
T Consensus 123 ~~v~~~P~i~~~~~~~lid~~G~i~~~ 149 (171)
T 3cmi_A 123 SGMLGLRGIKWNFEKFLVDKKGKVYER 149 (171)
T ss_dssp CCSSSCCSCCSTTCEEEECSSSCEEEE
T ss_pred CCcCCCCcccccceEEEECCCCCEEEE
Confidence 5778999 99999999999864
No 202
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=96.09 E-value=0.23 Score=55.49 Aligned_cols=119 Identities=8% Similarity=0.011 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHHHhccccCCCe---EEEeecCCCCCC--------CCCc---ccH---HHHHHHHHHHHHHcCChHH
Q 005023 451 KEYMEVAESAASFIRRHLYDEQTHR---LQHSFRNGPSKA--------PGFL---DDY---AFLISGLLDLYEFGSGTKW 513 (718)
Q Consensus 451 ~~~l~~A~~~~~~l~~~~~d~~~g~---l~~~~~~g~~~~--------~~~l---~Dy---A~li~all~LYeaTgd~~~ 513 (718)
+++++.|+++.+-..........|. .++ +..+.... .++. ..| -.+|+.+.-||++|||+.|
T Consensus 313 ~~~~~~a~~l~~tC~~~y~~~~tGl~PE~~~-~~~~~~~~~~~~~~~~~g~~~~~~~y~LRPE~iES~fylyR~TgD~~y 391 (475)
T 2ri9_A 313 QDFIDFGLELVDGCEATYNSTLTKIGPDSWG-WDPKKVPSDQKEFYEKAGFYISSGSYVLRPEVIESFYYAHRVTGKEIY 391 (475)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSSSSCCCSEEE-CCTTCCCGGGHHHHHHHSCEEEECCBCSCCHHHHHHHHHHHHHCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCcEEE-eecCcccccccccccCCCceecccccCCChHHHHHHHHHHHHhCCHHH
Confidence 7899999999887655432212332 222 21111100 0110 112 1689999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccCCccccCCCCCCccccccccCCCCCCCChHHHHHHHHHHHHHHhCC
Q 005023 514 LVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAG 578 (718)
Q Consensus 514 L~~A~~L~~~~~~~F~D~~~Gg~f~t~~~~~~l~~r~k~~~D~a~PS~ns~~a~~LlrL~~lt~~ 578 (718)
++++-++++.+..+..-+ .||-.-.+ +...+....++.++|- .+++-|--|+.+..+
T Consensus 392 r~~gw~~f~ai~k~~rt~--~G~a~i~d----V~~~~~~~~~D~meSF--~laETLKYlYLLFsd 448 (475)
T 2ri9_A 392 RDWVWNAFVAINSTCRTD--SGFAAVSD----VNKANGGSKYDNQESF--LFAEVMKYSYLAHSE 448 (475)
T ss_dssp HHHHHHHHHHHHHHTBCS--SSBCCBSC----TTSGGGSSBBSCCCTH--HHHTHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHccc--cCCccccc----ccCCCCCCcCCccchH--HHHHHHHHHHhcccC
Confidence 999999999999887543 34443221 1110102234455553 566677777777654
No 203
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=96.09 E-value=0.0069 Score=53.71 Aligned_cols=74 Identities=15% Similarity=0.169 Sum_probs=44.6
Q ss_pred hHHhhhhhcCCcE-EEEcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEe
Q 005023 4 RSFCGGTKTRRTH-FLINTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFL 82 (718)
Q Consensus 4 ~a~~~Ak~e~K~i-i~y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl 82 (718)
+.+++..++++.+ +..+||++|+.+.+ +-+-++-.|..|.||.+. |+-. .....+...+|....|+.+ +
T Consensus 10 ~~~~~~i~~~~v~vy~~~~Cp~C~~~~~-------~L~~~~i~~~~~di~~~~-~~~~-~~~~~l~~~~g~~tvP~if-i 79 (113)
T 3rhb_A 10 ESIRKTVTENTVVIYSKTWCSYCTEVKT-------LFKRLGVQPLVVELDQLG-PQGP-QLQKVLERLTGQHTVPNVF-V 79 (113)
T ss_dssp HHHHHHHHHSSEEEEECTTCHHHHHHHH-------HHHHTTCCCEEEEGGGST-THHH-HHHHHHHHHHSCCSSCEEE-E
T ss_pred HHHHHHHhcCCEEEEECCCChhHHHHHH-------HHHHcCCCCeEEEeecCC-CChH-HHHHHHHHHhCCCCcCEEE-E
Confidence 3455566666643 34599999998762 233455567777776541 1211 2233344457889999874 4
Q ss_pred CCCCcee
Q 005023 83 SPDLKPL 89 (718)
Q Consensus 83 ~p~g~p~ 89 (718)
+|+.+
T Consensus 80 --~g~~i 84 (113)
T 3rhb_A 80 --CGKHI 84 (113)
T ss_dssp --TTEEE
T ss_pred --CCEEE
Confidence 67766
No 204
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=96.07 E-value=0.0052 Score=65.59 Aligned_cols=63 Identities=16% Similarity=0.276 Sum_probs=48.0
Q ss_pred hhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhc--ccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCC
Q 005023 10 TKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLND--WFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSP 84 (718)
Q Consensus 10 k~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~--~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p 84 (718)
.+++|++++ .+||++|+.|...- .++++.+.. +++.++||.++.+ .. -+++.|+|+.+|+.+
T Consensus 264 ~~~~k~~lv~f~a~wC~~C~~~~p~~---~~la~~~~~~~~v~~~~vd~~~~~-~~---------~~~v~~~Pt~~~~~~ 330 (361)
T 3uem_A 264 FDEKKNVFVEFYAPWCGHCKQLAPIW---DKLGETYKDHENIVIAKMDSTANE-VE---------AVKVHSFPTLKFFPA 330 (361)
T ss_dssp TCTTCEEEEEEECTTCHHHHHHHHHH---HHHHHHTTTCSSEEEEEEETTTCB-CS---------SCCCCSSSEEEEECS
T ss_pred ccCCCcEEEEEecCcCHhHHHHHHHH---HHHHHHhccCCcEEEEEEECCccc-hh---------hcCCcccCeEEEEEC
Confidence 456888866 38999999998643 456666665 4999999999886 11 168899999999976
Q ss_pred C
Q 005023 85 D 85 (718)
Q Consensus 85 ~ 85 (718)
.
T Consensus 331 ~ 331 (361)
T 3uem_A 331 S 331 (361)
T ss_dssp S
T ss_pred C
Confidence 5
No 205
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=96.07 E-value=0.0064 Score=71.98 Aligned_cols=74 Identities=12% Similarity=0.105 Sum_probs=53.6
Q ss_pred hHHhhhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEE
Q 005023 4 RSFCGGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSV 80 (718)
Q Consensus 4 ~a~~~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~v 80 (718)
+-+..+.++++++++ .+||+.|+.|..+- .++++.+...+..++||.++.+++.+. +|+.|+|+.+
T Consensus 124 ~~f~~~i~~~~~~lv~Fya~wC~~C~~~~p~~---~~~a~~~~~~v~~~~vd~~~~~~l~~~--------~~v~~~Pt~~ 192 (780)
T 3apo_A 124 REFDAAVNSGELWFVNFYSPGSSHSHDLAPTW---REFAKEVDGLLRIGAVNCGDDRMLCRM--------KGVNSYPSLF 192 (780)
T ss_dssp HHHHHHHTSSSCEEEEEECSSCHHHHHHHHHH---HHHHHHTTTTSEEEEEETTTCSSCC----------------CEEE
T ss_pred HhHHhhhcCCCcEEEEEeCCCCcchhHhhHHH---HHHHHHhcCceEEEEEeCCCcHHHHHH--------cCCceeeeEE
Confidence 456677788999876 38999999999754 578888887788999999999988775 4678999988
Q ss_pred EeCCCCcee
Q 005023 81 FLSPDLKPL 89 (718)
Q Consensus 81 fl~p~g~p~ 89 (718)
|+ .+|+.+
T Consensus 193 ~~-~~g~~~ 200 (780)
T 3apo_A 193 IF-RSGMAA 200 (780)
T ss_dssp EE-CTTSCC
T ss_pred EE-eCCcEe
Confidence 87 577753
No 206
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=96.06 E-value=0.0066 Score=56.47 Aligned_cols=79 Identities=16% Similarity=0.120 Sum_probs=45.1
Q ss_pred hhcCCcEEE---EcCCch-hhhhhccccCcHHHHHHhhc-----c--cEEEEecCCC-CcchHHHHHH------------
Q 005023 10 TKTRRTHFL---INTCHW-CHVMEVESFEDEGVAKLLND-----W--FVSIKVDREE-RPDVDKVYMT------------ 65 (718)
Q Consensus 10 k~e~K~ii~---y~~C~w-ChvM~~esf~d~~va~~ln~-----~--Fv~vkvD~ee-~pd~d~~y~~------------ 65 (718)
.-.+|++++ ++||.. |..+... + .++.+.+.+ + ||.|-+|.+. .|+.-+.|.+
T Consensus 20 ~~~gk~vll~f~~~~C~~~C~~~~~~-l--~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~ 96 (164)
T 2ggt_A 20 DYLGQWLLIYFGFTHCPDVCPEELEK-M--IQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGT 96 (164)
T ss_dssp GGTTCEEEEEEECTTCSSHHHHHHHH-H--HHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECC
T ss_pred HcCCCEEEEEEEeCCCCchhHHHHHH-H--HHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCC
Confidence 335788765 589998 9886642 2 234444432 4 4455555422 1221111111
Q ss_pred -----HHHHhcCCCCCC---------------cEEEeCCCCceeec
Q 005023 66 -----YVQALYGGGGWP---------------LSVFLSPDLKPLMG 91 (718)
Q Consensus 66 -----~~q~~~g~~GwP---------------~~vfl~p~g~p~~~ 91 (718)
.+...+|..+.| ++++++|+|+....
T Consensus 97 ~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~ 142 (164)
T 2ggt_A 97 REEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDY 142 (164)
T ss_dssp HHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEE
T ss_pred HHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEE
Confidence 112236777889 89999999999864
No 207
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=96.02 E-value=0.015 Score=52.35 Aligned_cols=76 Identities=12% Similarity=0.185 Sum_probs=41.4
Q ss_pred hHHhhhhhcCCcE-EEEcCCchhhhh-hccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEE
Q 005023 4 RSFCGGTKTRRTH-FLINTCHWCHVM-EVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVF 81 (718)
Q Consensus 4 ~a~~~Ak~e~K~i-i~y~~C~wChvM-~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vf 81 (718)
+.++...+.++.+ +..+||++|+.+ . ..+++... -+-.|..| |.++.|+-... ...++..+|..++|+. |
T Consensus 16 ~~~~~~i~~~~Vvvf~~~~Cp~C~~alk-~~L~~~~~---~~i~~~~v--did~~~~~~~~-~~~l~~~~g~~tvP~v-f 87 (118)
T 3c1r_A 16 KHVKDLIAENEIFVASKTYCPYCHAALN-TLFEKLKV---PRSKVLVL--QLNDMKEGADI-QAALYEINGQRTVPNI-Y 87 (118)
T ss_dssp HHHHHHHHHSSEEEEECSSCHHHHHHHH-HHHTTSCC---CGGGEEEE--EGGGSTTHHHH-HHHHHHHHSCCSSCEE-E
T ss_pred HHHHHHHccCcEEEEEcCCCcCHHHHHH-HHHHHcCC---CCCCeEEE--ECccCCChHHH-HHHHHHHhCCCCcCEE-E
Confidence 4555666666654 346999999987 4 23322210 00234444 44454442222 2223345788999975 5
Q ss_pred eCCCCcee
Q 005023 82 LSPDLKPL 89 (718)
Q Consensus 82 l~p~g~p~ 89 (718)
+ +|+.+
T Consensus 88 i--~g~~i 93 (118)
T 3c1r_A 88 I--NGKHI 93 (118)
T ss_dssp E--TTEEE
T ss_pred E--CCEEE
Confidence 4 67766
No 208
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=96.00 E-value=0.015 Score=50.35 Aligned_cols=59 Identities=19% Similarity=0.226 Sum_probs=38.4
Q ss_pred EEcCCchhhhhhccccCcHHHHHHhhcccEEE-EecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCceeec
Q 005023 18 LINTCHWCHVMEVESFEDEGVAKLLNDWFVSI-KVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 18 ~y~~C~wChvM~~esf~d~~va~~ln~~Fv~v-kvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p~~~ 91 (718)
+.+||+||+... ++|+++=|+. .+|.++.|+..+.+++ ...|....|..+| .||..+.+
T Consensus 10 s~~~Cp~C~~aK----------~~L~~~gi~y~~idi~~d~~~~~~~~~---~~~G~~tVP~I~i--~Dg~~l~~ 69 (92)
T 2lqo_A 10 TTSWCGYCLRLK----------TALTANRIAYDEVDIEHNRAAAEFVGS---VNGGNRTVPTVKF--ADGSTLTN 69 (92)
T ss_dssp ECTTCSSHHHHH----------HHHHHTTCCCEEEETTTCHHHHHHHHH---HSSSSSCSCEEEE--TTSCEEES
T ss_pred cCCCCHhHHHHH----------HHHHhcCCceEEEEcCCCHHHHHHHHH---HcCCCCEeCEEEE--eCCEEEeC
Confidence 348999999854 3555443433 4677777776655433 2357889998766 57877743
No 209
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=95.92 E-value=0.0079 Score=64.88 Aligned_cols=77 Identities=16% Similarity=-0.064 Sum_probs=54.1
Q ss_pred hHHhhhhhcCCcEEE--E-cCCchhhhhhcccc---CcHHHHHHhhc-ccEEEEecCCCCcchHHHHHHHHHHhcCCCCC
Q 005023 4 RSFCGGTKTRRTHFL--I-NTCHWCHVMEVESF---EDEGVAKLLND-WFVSIKVDREERPDVDKVYMTYVQALYGGGGW 76 (718)
Q Consensus 4 ~a~~~Ak~e~K~ii~--y-~~C~wChvM~~esf---~d~~va~~ln~-~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~Gw 76 (718)
+-+....++++++++ | .||+.|..+.+-.+ .=..+++.+.. ++..++||.++.+++.+. +|+.|+
T Consensus 21 ~~f~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~--------~~V~~~ 92 (367)
T 3us3_A 21 KNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKK--------LGLTEE 92 (367)
T ss_dssp TTHHHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHH--------HTCCST
T ss_pred HHHHHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHH--------cCCCcC
Confidence 345566677899876 3 89988744331111 12356667765 588899999999887665 588999
Q ss_pred CcEEEeCCCCcee
Q 005023 77 PLSVFLSPDLKPL 89 (718)
Q Consensus 77 P~~vfl~p~g~p~ 89 (718)
||.+|+. +|+++
T Consensus 93 PTl~~f~-~G~~~ 104 (367)
T 3us3_A 93 DSIYVFK-EDEVI 104 (367)
T ss_dssp TEEEEEE-TTEEE
T ss_pred ceEEEEE-CCcEE
Confidence 9999997 68875
No 210
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=95.83 E-value=0.011 Score=66.85 Aligned_cols=58 Identities=17% Similarity=0.128 Sum_probs=44.1
Q ss_pred EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCceeec
Q 005023 19 INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 19 y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p~~~ 91 (718)
..||++|+.|.. .|+ +++ ..|.+...++||.++.|++.+. +|+.+.|+.++ +|+.+..
T Consensus 126 a~~C~~C~~~~~-~l~--~~a-~~~~~v~~~~vd~~~~~~~~~~--------~~i~svPt~~i---~g~~~~~ 183 (521)
T 1hyu_A 126 SLSCHNCPDVVQ-ALN--LMA-VLNPRIKHTAIDGGTFQNEITE--------RNVMGVPAVFV---NGKEFGQ 183 (521)
T ss_dssp CTTCSSHHHHHH-HHH--HHH-HHCTTEEEEEEETTTCHHHHHH--------TTCCSSSEEEE---TTEEEEE
T ss_pred CCCCcCcHHHHH-HHH--HHH-hHcCceEEEEEechhhHHHHHH--------hCCCccCEEEE---CCEEEec
Confidence 479999999874 232 233 3455677788999999998776 68899999977 8998854
No 211
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=95.81 E-value=0.069 Score=58.57 Aligned_cols=77 Identities=25% Similarity=0.242 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEeecCCCCCCCCCcccHHHHHHH
Q 005023 421 VISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPSKAPGFLDDYAFLISG 500 (718)
Q Consensus 421 ~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~~g~~~~~~~l~DyA~li~a 500 (718)
++.+|..+++++++ ++|++.|.++++.+++.-. + ....++....|=.+..
T Consensus 294 i~~~l~~~~~~~~~----------------~~~~~~a~~~~~~~~~~g~------~--------~~~~~lChG~aG~~~~ 343 (411)
T 3e6u_A 294 VIYMLIQAYKVFRE----------------EKYLCDAYQCADVIWQYGL------L--------KKGYGLCHGSAGNAYA 343 (411)
T ss_dssp HHHHHHHHHHHHCC----------------HHHHHHHHHHHHHHHHHCS------B--------TTCSCSTTSHHHHHHH
T ss_pred HHHHHHHHHHHcCC----------------HHHHHHHHHHHHHHHhcCc------c--------CCCCceecChHHHHHH
Confidence 45668888999987 7899999999877765311 0 1124666778888999
Q ss_pred HHHHHHHcCChHHHHHHHHHHHHHHHh
Q 005023 501 LLDLYEFGSGTKWLVWAIELQNTQDEL 527 (718)
Q Consensus 501 ll~LYeaTgd~~~L~~A~~L~~~~~~~ 527 (718)
++.+|+.|++++|+++|.++++.+.+.
T Consensus 344 ll~~~~~t~~~~~~~~A~~~~~~~~~~ 370 (411)
T 3e6u_A 344 FLTLYNLTQDMKYLYRACKFAEWCLEY 370 (411)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999887653
No 212
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=95.80 E-value=0.014 Score=52.19 Aligned_cols=73 Identities=11% Similarity=0.090 Sum_probs=45.1
Q ss_pred hHHhhhhhcCCcEE-EEcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEe
Q 005023 4 RSFCGGTKTRRTHF-LINTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFL 82 (718)
Q Consensus 4 ~a~~~Ak~e~K~ii-~y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl 82 (718)
+.+++..++++.+| ..+||++|+.+.+ +-+-++-.|..|.||..+ +-.. ....+...+|....|..++
T Consensus 8 ~~~~~~i~~~~v~vy~~~~Cp~C~~ak~-------~L~~~~i~~~~~dvd~~~--~~~~-~~~~l~~~~g~~tvP~vfi- 76 (114)
T 3h8q_A 8 RHLVGLIERSRVVIFSKSYCPHSTRVKE-------LFSSLGVECNVLELDQVD--DGAR-VQEVLSEITNQKTVPNIFV- 76 (114)
T ss_dssp HHHHHHHHHCSEEEEECTTCHHHHHHHH-------HHHHTTCCCEEEETTTST--THHH-HHHHHHHHHSCCSSCEEEE-
T ss_pred HHHHHHhccCCEEEEEcCCCCcHHHHHH-------HHHHcCCCcEEEEecCCC--ChHH-HHHHHHHHhCCCccCEEEE-
Confidence 45667777777653 4589999998662 223345567777676543 2222 1222333478888999866
Q ss_pred CCCCcee
Q 005023 83 SPDLKPL 89 (718)
Q Consensus 83 ~p~g~p~ 89 (718)
+|+.+
T Consensus 77 --~g~~i 81 (114)
T 3h8q_A 77 --NKVHV 81 (114)
T ss_dssp --TTEEE
T ss_pred --CCEEE
Confidence 77766
No 213
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=95.79 E-value=0.44 Score=53.81 Aligned_cols=288 Identities=15% Similarity=0.133 Sum_probs=158.4
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHhccCCCCceeeeccCCcccccCcccccCCceEee
Q 005023 241 RWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMIGPGGEIFSAEDADSAETEGATRKKEGAFYVW 320 (718)
Q Consensus 241 ~W~vPHFEKmLyDnA~ll~~ya~Ay~~t~~~~y~~~A~~~~~~l~~~m~~p~Ggf~sa~DADs~~~~~~~~~~EG~yY~W 320 (718)
+-.|+-||--. ++|-.++-||.+++++.|++.|.+..+-|+--+-.|.|-=|+..+-....... .+..+. +
T Consensus 162 d~~VsvFETtI----R~LGGLLSAy~Lsgd~~lL~kA~dLadrLlpAFdTptgiP~~~vnl~~g~~~~--~~~~~~--s- 232 (538)
T 1x9d_A 162 DVDVNLFESTI----RILGGLLSAYHLSGDSLFLRKAEDFGNRLMPAFRTPSKIPYSDVNIGTGVAHP--PRWTSD--S- 232 (538)
T ss_dssp SCEEEHHHHHH----HHHHHHHHHHHHHCCHHHHHHHHHHHHHHGGGGCSTTSCCCSEEETTTCCEEC--CTTCSE--E-
T ss_pred Cceeehhheeh----hhhhhhhhHHHhcCCHHHHHHHHHHHHHHHHhhcCCCCCCcceeeecccccCC--CCcCCC--c-
Confidence 34567788654 58888888999999999999999999999988877776544433322100000 000000 0
Q ss_pred chHHHHHHhchhHHHHHHHhcccCCCCcCCCCCCCCCCccCCcceeeccCCchHHHHhcCCCHHHHHHHHHHHHHHHHhh
Q 005023 321 TSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLEKYLNILGECRRKLFDV 400 (718)
Q Consensus 321 t~~Ei~~~L~~~~~~~~~~~~v~~~Gn~~~~~~~dp~~~~eg~nvL~~~~~~~~~a~~~g~~~~~~~~~l~~~r~~L~~~ 400 (718)
...|+-.+. =+ |. .++...|- ....+..+.+.+.|.+.
T Consensus 233 ~lAe~GSl~-LE---F~------------------------------------~LS~LTGd--~~Y~~~a~r~~~~l~~~ 270 (538)
T 1x9d_A 233 TVAEVTSIQ-LE---FR------------------------------------ELSRLTGD--KKFQEAVEKVTQHIHGL 270 (538)
T ss_dssp EHHHHHSSH-HH---HH------------------------------------HHHHHHCC--THHHHHHHHHHHHHHTC
T ss_pred eecccccee-ee---HH------------------------------------HHHHHhCC--cHHHHHHHHHHHHHHhc
Confidence 011110000 00 00 01111121 12334455555666554
Q ss_pred hccCCCCC-----CCch-------hhhchHHHHH---HHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHH
Q 005023 401 RSKRPRPH-----LDDK-------VIVSWNGLVI---SSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIR 465 (718)
Q Consensus 401 R~~R~~P~-----~Ddk-------ilt~WNgl~I---~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~ 465 (718)
|. ..|. +|.. -..+|.|..- .=|.+.+..++.. .+.|+++=.++++-+.
T Consensus 271 ~~--~~~GL~p~~i~~~tG~~~~~~~~~lGa~~DS~YEYLlK~~il~g~~--------------d~~y~~my~~a~~~i~ 334 (538)
T 1x9d_A 271 SG--KKDGLVPMFINTHSGLFTHLGVFTLGARADSYYEYLLKQWIQGGKQ--------------ETQLLEDYVEAIEGVR 334 (538)
T ss_dssp SC--CBTTBCCSEEETTTCCEESTTEECSSTTTHHHHHHHHHHHHHTTSC--------------CHHHHHHHHHHHHHHH
T ss_pred cc--CCCCCcceEEeCCCCCccCCcceeecCCccHHHHHHHHHHHHcCCc--------------hHHHHHHHHHHHHHHH
Confidence 42 1111 1110 0234444433 3567777777731 2789999999999999
Q ss_pred Hhcccc--CCCeEEE-eecCCCCCCCCCcccHHHHHHHHHHHHHHc-CChHHHHHHHHHHHHHHHhcccccCCc----cc
Q 005023 466 RHLYDE--QTHRLQH-SFRNGPSKAPGFLDDYAFLISGLLDLYEFG-SGTKWLVWAIELQNTQDELFLDREGGG----YF 537 (718)
Q Consensus 466 ~~~~d~--~~g~l~~-~~~~g~~~~~~~l~DyA~li~all~LYeaT-gd~~~L~~A~~L~~~~~~~F~D~~~Gg----~f 537 (718)
+|+... .++.++- .+..|.. ....+--+.++-|++.|.-.. .+.++++.|.+|.+.+...+....+|- |.
T Consensus 335 ~~L~~~~~~~~~~~v~~~~~g~~--~~~~~hL~cF~gG~~aLgg~~~~~~~~l~~a~~L~~tC~~~Y~~~~tGl~PE~~~ 412 (538)
T 1x9d_A 335 THLLRHSEPSKLTFVGELAHGRF--SAKMDHLVCFLPGTLALGVYHGLPASHMELAQELMETCYQMNRQMETGLSPEIVH 412 (538)
T ss_dssp HHTEEECTTTCCEEECEEETTEE--ECEEEGGGGHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHTSTTSCCCSEEE
T ss_pred HHhccCCCCCCceEEEeccCCcc--CcccchHhhhhhhHHHhcCcccCcHHHHHHHHHHHHHHHHHHHhcccCCCceEEE
Confidence 998532 1233332 2444321 223344466678888887644 567899999999998877765433442 22
Q ss_pred cCCCC---CCccccccccCCCCCCCChHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHhhhhh
Q 005023 538 NTTGE---DPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAGSKSDYYRQNAEHSLAVFETRLKDMAMA 605 (718)
Q Consensus 538 ~t~~~---~~~l~~r~k~~~D~a~PS~ns~~a~~LlrL~~lt~~~~~~~y~e~a~~~l~~~~~~i~~~p~~ 605 (718)
+.... .++..++.. |...+= --..++.+.-|+++||+ +.|++.+.++++++.... +.+.|
T Consensus 413 ~~~~~~~~~~~~~~~~~---d~~y~L-RPE~IES~fylyR~TgD---~~yre~gw~~f~ai~k~~-rt~~G 475 (538)
T 1x9d_A 413 FNLYPQPGRRDVEVKPA---DRHNLL-RPETVESLFYLYRVTGD---RKYQDWGWEILQSFSRFT-RVPSG 475 (538)
T ss_dssp CCSSCCTTCCSCBCCGG---GCCBCC-CCHHHHHHHHHHHHHCC---THHHHHHHHHHHHHHHHT-BCTTS
T ss_pred eccCCCccccceeeecc---CcccCC-ChHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHhc-ccccC
Confidence 22110 111111110 110000 01578899999999996 899999999999976543 45555
No 214
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=95.76 E-value=0.29 Score=54.96 Aligned_cols=260 Identities=15% Similarity=0.095 Sum_probs=132.2
Q ss_pred CCCcchHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHhc---cCCCCceeeeccCCcccccCcccccCCceEeec
Q 005023 245 PHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDM---IGPGGEIFSAEDADSAETEGATRKKEGAFYVWT 321 (718)
Q Consensus 245 PHFEKmLyDnA~ll~~ya~Ay~~t~~~~y~~~A~~~~~~l~~~m---~~p~Ggf~sa~DADs~~~~~~~~~~EG~yY~Wt 321 (718)
++-+-.+-.-+=|..-|....++|||+.|.+.|+++.+.|.+.- ....|-+-...|+++.. --+..+.|.
T Consensus 169 ~~~~~~~Ae~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~~l~~~~~~~~~~~GL~p~~i~~~tg~-------~~~~~~~~G 241 (503)
T 1hcu_A 169 GASSNNVAEIGSLVLEWTRLSDLTGNPQYAQLAQKGESYLLNPKGSPEAWPGLIGTFVSTSNGT-------FQDSSGSWS 241 (503)
T ss_dssp CCSEEEHHHHTTSHHHHHHHHHHHSCTHHHHHHHHHHHHHHSCCBSCCSBTTBCCSEEETTTCC-------BCCCEECSS
T ss_pred CCCccccccccceeeehHHHHHHhCChHHHHHHHHHHHHHHhhhcccCCCCCceeeEEeCCCCc-------ccCCeeeec
Confidence 33344555555556667888999999999999999999998632 12445554566766521 112222221
Q ss_pred hHHHHHHhchh-HHHHHHHhcccCCCCcCCCCCCCCCCccCCcceeeccCCchHHHHhcCCCHHHHHHHHHHHHHHHHhh
Q 005023 322 SKEVEDILGEH-AILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLEKYLNILGECRRKLFDV 400 (718)
Q Consensus 322 ~~Ei~~~L~~~-~~~~~~~~~v~~~Gn~~~~~~~dp~~~~eg~nvL~~~~~~~~~a~~~g~~~~~~~~~l~~~r~~L~~~ 400 (718)
..++. .+.+.+.|=+.... .+.+. +-..+.++.+++.|+..
T Consensus 242 ------a~~DS~YEYLlK~~il~g~~-------------------------~~~y~-------~m~~~a~~~i~~~l~~~ 283 (503)
T 1hcu_A 242 ------GLMDSFYEYLIKMYLYDPVA-------------------------FAHYK-------DRWVLGADSTIGHLGSH 283 (503)
T ss_dssp ------TTTHHHHHHHHHHHHHCTTT-------------------------THHHH-------HHHHHHHHHHHHHTEEC
T ss_pred ------CCCccHHHHHHHHHHHcCCc-------------------------hHHHH-------HHHHHHHHHHHHHhccC
Confidence 01111 22233333222100 00111 12334455556666532
Q ss_pred hccCCC-CCCC-----------chhhhchHHHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhc
Q 005023 401 RSKRPR-PHLD-----------DKVIVSWNGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHL 468 (718)
Q Consensus 401 R~~R~~-P~~D-----------dkilt~WNgl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~ 468 (718)
...+.. .++. +...+-|=|+ ++-++.+++. +++++.|+++.+-.....
T Consensus 284 ~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~G~----~aLgg~~~~~----------------~~~~~~a~~L~~tC~~~y 343 (503)
T 1hcu_A 284 PSTRKDLTFLSSYNGQSTSPNSGHLASFGGGN----FILGGILLNE----------------QKYIDFGIKLASSYFGTY 343 (503)
T ss_dssp BTTCTTCCEECEEETTEEESEEEGGGGGHHHH----HHHHHHHHTC----------------HHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCceEEEeccCCccccccchhhhhhhHH----HHhcCccccc----------------HHHHHHHHHHHHHHHHHH
Confidence 111100 1111 1122333333 3334555554 789999999988765543
Q ss_pred cccCCCe---EEEeecCCC--C--CCC----------CCc---ccHH---HHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Q 005023 469 YDEQTHR---LQHSFRNGP--S--KAP----------GFL---DDYA---FLISGLLDLYEFGSGTKWLVWAIELQNTQD 525 (718)
Q Consensus 469 ~d~~~g~---l~~~~~~g~--~--~~~----------~~l---~DyA---~li~all~LYeaTgd~~~L~~A~~L~~~~~ 525 (718)
.....|. .++ +.... . ... ++. ..|- .+|+.+.-||++|||+.|++++-++++.+.
T Consensus 344 ~~~~tGl~PE~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~y~LRPE~iES~fylyR~TgD~~yre~gw~if~ai~ 422 (503)
T 1hcu_A 344 TQTASGIGPEGFA-WVDSVTGAGGSPPSSQSGFYSSAGFWVTAPYYILRPETLESLYYAYRVTGDSKWQDLAWEALSAIE 422 (503)
T ss_dssp HTSSSSCCCSEEE-CCBTTTCCSCCCCGGGHHHHHHHSCEEEECCBCCCCHHHHHHHHHHHHHCBHHHHHHHHHHHHHHH
T ss_pred HhCccCCCceEEE-eecCccccccCCcccccccccCCCceeccccccCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 2212332 222 11111 0 000 100 1121 689999999999999999999999999999
Q ss_pred HhcccccCCccccCCCCCCccccccccCCCCCCCChHHHHHHHHHHHHHHhCC
Q 005023 526 ELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAG 578 (718)
Q Consensus 526 ~~F~D~~~Gg~f~t~~~~~~l~~r~k~~~D~a~PS~ns~~a~~LlrL~~lt~~ 578 (718)
.+..-+ .||-.-.+ +...+....++.++|- .+++-|--|+.+..+
T Consensus 423 k~~r~~--~Gya~i~d----V~~~~~~~~~D~meSF--~laETLKYlYLLFsd 467 (503)
T 1hcu_A 423 DACRAG--SAYSSIND----VTQANGGGASDDMESF--WFAEALKYAYLIFAE 467 (503)
T ss_dssp HHHEET--TEECCBSC----TTSTTCSCBCSCBCHH--HHHTHHHHHHHHHSC
T ss_pred HHHhhc--cCCccccc----ccCCCCCCcCCccchH--HHHHHHHHHheeccC
Confidence 887543 34433221 1100001223334432 455666666666654
No 215
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=95.66 E-value=0.0085 Score=62.86 Aligned_cols=69 Identities=7% Similarity=0.064 Sum_probs=44.1
Q ss_pred hhHHhhhhhcCCcEE-EEcCCchhhhhhccccCcHHHHHHhhcccEEEEecC----CCCcchHHHHHHHHHHhcCCCCCC
Q 005023 3 RRSFCGGTKTRRTHF-LINTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDR----EERPDVDKVYMTYVQALYGGGGWP 77 (718)
Q Consensus 3 ~~a~~~Ak~e~K~ii-~y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~----ee~pd~d~~y~~~~q~~~g~~GwP 77 (718)
..++++..++++.++ ..+||+.|+.|+. .|+.- ++ .+-.|++|. +++|++.+. +|+.|+|
T Consensus 189 ~~~la~~l~~~~vV~F~A~WC~~Ck~l~p-~le~l--A~----~l~~Vd~d~~d~~~~~~~la~~--------~gI~~vP 253 (291)
T 3kp9_A 189 AVGLAAHLRQIGGTMYGAYWCPHCQDQKE-LFGAA--FD----QVPYVECSPNGPGTPQAQECTE--------AGITSYP 253 (291)
T ss_dssp HHHHHHHHHHTTCEEEECTTCHHHHHHHH-HHGGG--GG----GSCEEESCSSCSSSCCCHHHHT--------TTCCSTT
T ss_pred HHHHHHHhCCCCEEEEECCCCHHHHHHHH-HHHHH--HH----HcCEEEEeecCchhhHHHHHHH--------cCCcccC
Confidence 345666666666664 4589999999984 45442 22 233455553 446666554 6889999
Q ss_pred cEEEeCCCCcee
Q 005023 78 LSVFLSPDLKPL 89 (718)
Q Consensus 78 ~~vfl~p~g~p~ 89 (718)
+.+ + +|+++
T Consensus 254 T~~-i--~G~~~ 262 (291)
T 3kp9_A 254 TWI-I--NGRTY 262 (291)
T ss_dssp EEE-E--TTEEE
T ss_pred eEE-E--CCEEe
Confidence 954 4 88874
No 216
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=95.57 E-value=0.18 Score=55.93 Aligned_cols=110 Identities=16% Similarity=0.210 Sum_probs=66.6
Q ss_pred cCCCCCCC---CCCCChhHHH---HHHHhhhh---hcccCCCCCCHHHHHHHHHHHHHHHhCCCcccCCCcEEEEec---
Q 005023 171 RFGGFGSA---PKFPRPVEIQ---MMLYHSKK---LEDTGKSGEASEGQKMVLFTLQCMAKGGIHDHVGGGFHRYSV--- 238 (718)
Q Consensus 171 ~~GGfg~a---pKFP~~~~l~---~Ll~~~~~---~~~~~~~~~~~~~~~~~~~TL~~m~~gGi~D~v~GGF~RYsv--- 238 (718)
..|||-.| -||-.|+... +++-+... ..+.+ .-+++++.+..-++-|.+ . +.-.|+|| +.|
T Consensus 50 l~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~~~~~~~~g---~~~d~ldeikwg~D~llk--~-~~~~~~~y-~qVgd~ 122 (441)
T 1ia6_A 50 LTGGYHDAGDHVKFGLPQGYSAAILGWSLYEFKESFDATG---NTTKMLQQLKYFTDYFLK--S-HPNSTTFY-YQVGEG 122 (441)
T ss_dssp CCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHCHHHHHHTT---CHHHHHHHHHHHHHHHHH--T-CCSTTCEE-EEESCH
T ss_pred CCCCeeeCCCCCeeccchHHHHHHHHHHHHHhHHHHhhcC---cHHHHHHHHHHHHHHHHH--h-ccCCCcEE-EEeCCC
Confidence 56999554 6776665432 23232221 11111 347899999999999888 2 22234444 344
Q ss_pred --C-CCCCCCCCcch---H-H---------H-HHHHHHHHHHHHHccCC--h----HHHHHHHHHHHHHHHh
Q 005023 239 --D-ERWHVPHFEKM---L-Y---------D-QGQLANVYLDAFSLTKD--V----FYSYICRDILDYLRRD 287 (718)
Q Consensus 239 --D-~~W~vPHFEKm---L-y---------D-nA~ll~~ya~Ay~~t~~--~----~y~~~A~~~~~~l~~~ 287 (718)
| .-|..|.-.+| . | | -+..+-+++.|+++.++ + .+++.|++..+|..++
T Consensus 123 ~~Dh~~w~~Pe~~~~~R~~~y~~~~~~p~sd~a~~~AAalAaas~vfk~~D~~yA~~~L~~A~~~~~fa~~~ 194 (441)
T 1ia6_A 123 NADHTYWGAPEEQTGQRPSLYKADPSSPASDILSETSAALTLMYLNYKNIDSAYATKCLNAAKELYAMGKAN 194 (441)
T ss_dssp HHHTTCCSCGGGCCSCCCCCEEEBTTBCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHS
T ss_pred CccccccCChhhCCCCCceeeEeCCCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHc
Confidence 2 24565543221 1 2 3 57888999999999874 4 4567888899998874
No 217
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=95.53 E-value=0.0038 Score=62.56 Aligned_cols=64 Identities=9% Similarity=0.087 Sum_probs=44.3
Q ss_pred CCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCcee
Q 005023 13 RRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPL 89 (718)
Q Consensus 13 ~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p~ 89 (718)
+|+||+ .+||..|+.|... | .++++.. .++..++||.+ .|++... +++.|+|+.+|+. +|+++
T Consensus 120 ~k~vvV~F~a~wC~~C~~l~p~-l--~~la~~~-~~v~f~~vd~~-~~~l~~~--------~~i~~~PTl~~~~-~G~~v 185 (217)
T 2trc_P 120 VTTIVVNIYEDGVRGCDALNSS-L--ECLAAEY-PMVKFCKIRAS-NTGAGDR--------FSSDVLPTLLVYK-GGELI 185 (217)
T ss_dssp TCEEEEEEECTTSTTHHHHHHH-H--HHHHTTC-TTSEEEEEEHH-HHTCSTT--------SCGGGCSEEEEEE-TTEEE
T ss_pred CcEEEEEEECCCCccHHHHHHH-H--HHHHHHC-CCeEEEEEECC-cHHHHHH--------CCCCCCCEEEEEE-CCEEE
Confidence 478765 3899999999842 2 2233333 24777888877 5555443 5778999999884 99987
Q ss_pred e
Q 005023 90 M 90 (718)
Q Consensus 90 ~ 90 (718)
.
T Consensus 186 ~ 186 (217)
T 2trc_P 186 S 186 (217)
T ss_dssp E
T ss_pred E
Confidence 4
No 218
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=95.49 E-value=0.007 Score=52.81 Aligned_cols=52 Identities=21% Similarity=0.274 Sum_probs=30.6
Q ss_pred EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCC--CCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCcee
Q 005023 19 INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDRE--ERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPL 89 (718)
Q Consensus 19 y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~e--e~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p~ 89 (718)
.+||++|+.|.. .++. +.+.+-..+||.+ +.+++.. .+| .+.|+. |. +|+.+
T Consensus 24 ~~~C~~C~~~~~-~L~~------l~~~i~~~~vdi~~~~~~el~~--------~~g-~~vP~l-~~--~g~~~ 77 (100)
T 1wjk_A 24 KAPCPLCDEAKE-VLQP------YKDRFILQEVDITLPENSTWYE--------RYK-FDIPVF-HL--NGQFL 77 (100)
T ss_dssp CSSCHHHHHHHH-HTST------TSSSSEEEEEETTSSTTHHHHH--------HSS-SSCSEE-EE--SSSEE
T ss_pred CCCCcchHHHHH-HHHH------hhhCCeEEEEECCCcchHHHHH--------HHC-CCCCEE-EE--CCEEE
Confidence 479999999874 3431 1122444566666 3333222 267 899964 44 67765
No 219
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=95.45 E-value=0.55 Score=52.38 Aligned_cols=286 Identities=15% Similarity=0.119 Sum_probs=156.6
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHhccCCCCceeeeccCCcccccCcccccCCceEeech
Q 005023 243 HVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMIGPGGEIFSAEDADSAETEGATRKKEGAFYVWTS 322 (718)
Q Consensus 243 ~vPHFEKmLyDnA~ll~~ya~Ay~~t~~~~y~~~A~~~~~~l~~~m~~p~Ggf~sa~DADs~~~~~~~~~~EG~yY~Wt~ 322 (718)
.|+-||- |-+.|-.++-||.+++++.|++.|.+..+.|+--+-.|.|-=|+..+-.+... +. .-|..
T Consensus 100 ~vsvFET----tIR~LGGLLSAy~Lsgd~~lL~kA~dLad~LlpAFdTptgiP~~~vnl~~g~~-----~~----~~~~~ 166 (478)
T 1nxc_A 100 EVSVFEV----NIRFVGGLLSAYYLSGEEIFRKKAVELGVKLLPAFHTPSGIPWALLNMKSGIG-----RN----WPWAS 166 (478)
T ss_dssp EEEHHHH----HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHGGGGCSSSSCCCSEEETTTCCE-----EC----CTTSG
T ss_pred ccchhhe----ehhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccccC-----CC----CcccC
Confidence 4666885 55688888999999999999999999999999888777764444433221000 00 00110
Q ss_pred HHHHHHhchhHHHHHHHhcccCCCCcCCCCCCCCCCccCCcceeeccCCc----hHHHHhcCCCHHHHHHHHHHHHHHHH
Q 005023 323 KEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDS----SASASKLGMPLEKYLNILGECRRKLF 398 (718)
Q Consensus 323 ~Ei~~~L~~~~~~~~~~~~v~~~Gn~~~~~~~dp~~~~eg~nvL~~~~~~----~~~a~~~g~~~~~~~~~l~~~r~~L~ 398 (718)
.|.+++.-..++ ..++...|- ....+..+.+.+.|.
T Consensus 167 --------------------------------------~~~s~lAe~gsl~LEF~~LS~lTGd--~~Y~~~a~~~~~~l~ 206 (478)
T 1nxc_A 167 --------------------------------------GGSSILAEFGTLHLEFMHLSHLSGD--PVFAEKVMKIRTVLN 206 (478)
T ss_dssp --------------------------------------GGCEEHHHHTTCHHHHHHHHHHHCC--THHHHHHHHHHHHHH
T ss_pred --------------------------------------CCCcccccccchhhhHHHHHHHHCC--hHHHHHHHHHHHHHH
Confidence 001111111111 012222221 123334445555555
Q ss_pred hhhcc----------CCCCCCCchhhhchHHHHHH---HHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHH
Q 005023 399 DVRSK----------RPRPHLDDKVIVSWNGLVIS---SFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIR 465 (718)
Q Consensus 399 ~~R~~----------R~~P~~Ddkilt~WNgl~I~---ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~ 465 (718)
+.+.. +.--+.+. ..+|.|..-+ =|.+.+..+|.. ++.|+++-.++++-+.
T Consensus 207 ~~~~~~GL~p~~i~~~tg~~~~~--~~~~Ga~~DS~YEYLlK~~il~g~~--------------d~~~~~m~~~a~~~i~ 270 (478)
T 1nxc_A 207 KLDKPEGLYPNYLNPSSGQWGQH--HVSVGGLGDSFYEYLLKAWLMSDKT--------------DLEAKKMYFDAVQAIE 270 (478)
T ss_dssp HSCCGGGCCCSEECTTTCCBCSC--EECSSTTTHHHHHHHHHHHHHTTTC--------------CHHHHHHHHHHHHHHH
T ss_pred hcCCCCCccccccCCCCCCccCc--eeeecCCCchHHHHHHHHHHHcCCc--------------hHHHHHHHHHHHHHHH
Confidence 43321 00001111 1245555433 566777777641 2789999999999999
Q ss_pred HhccccC-CCeEEEe-ecCCCCCCCCCcccHHHHHHHHHHHHHHcCC----hHHHHHHHHHHHHHHHhcccccCCc----
Q 005023 466 RHLYDEQ-THRLQHS-FRNGPSKAPGFLDDYAFLISGLLDLYEFGSG----TKWLVWAIELQNTQDELFLDREGGG---- 535 (718)
Q Consensus 466 ~~~~d~~-~g~l~~~-~~~g~~~~~~~l~DyA~li~all~LYeaTgd----~~~L~~A~~L~~~~~~~F~D~~~Gg---- 535 (718)
+|+.... +|..+-. +..|.. ....+--+.++-|++.|.-...+ ++|++.|.+|.+.+...+....+|-
T Consensus 271 ~~l~~~~~~~~~~v~~~~~~~~--~~~~~hL~cF~gG~~aLg~~~~~~~~~~~~l~~a~~l~~tC~~~y~~~~tgl~PE~ 348 (478)
T 1nxc_A 271 THLIRKSSGGLTYIAEWKGGLL--EHKMGHLTCFAGGMFALGADGAPEARAQHYLELGAEIARTCHESYNRTYVKLGPEA 348 (478)
T ss_dssp HHTEEECTTSCEEECEEETTEE--ECEEETGGGGHHHHHHHTSTTSCTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCCSE
T ss_pred HHhcccCCCCcEEEEeccCCcc--cccccchhhhhHHHHHhccccccccchHHHHHHHHHHHHHHHHHHHhcccCCCCeE
Confidence 9986422 2333322 334321 11223335566788877644332 6899999999999987765544441
Q ss_pred cccCCCCCCccccccccCCCCCCCChHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHhhhhhHHH
Q 005023 536 YFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAGSKSDYYRQNAEHSLAVFETRLKDMAMAVPL 608 (718)
Q Consensus 536 ~f~t~~~~~~l~~r~k~~~D~a~PS~ns~~a~~LlrL~~lt~~~~~~~y~e~a~~~l~~~~~~i~~~p~~~~~ 608 (718)
|..... .+...++.. |...|= --..++.+.-|+++||+ +.|++.+.++++++... .+.+.|++.
T Consensus 349 ~~~~~~-~~~~~~~~~---~~~y~L-RPE~iES~fylyR~TgD---~~yre~gw~~f~ai~k~-~r~~~G~a~ 412 (478)
T 1nxc_A 349 FRFDGG-VEAIATRQN---EKYYIL-RPEVIETYMYMWRLTHD---PKYRTWAWEAVEALESH-CRVNGGYSG 412 (478)
T ss_dssp EESSTT-CSSBCCSGG---GCCBCS-CCHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHH-TEETTEECC
T ss_pred EEeccC-ccccccccc---ccccCC-ChHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHH-hhccccccc
Confidence 222111 111111110 100000 01467889999999996 89999999999997653 344555433
No 220
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=95.39 E-value=0.038 Score=48.30 Aligned_cols=69 Identities=9% Similarity=0.086 Sum_probs=40.2
Q ss_pred HHhhhhhcCCcEE-EE-----cCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCc
Q 005023 5 SFCGGTKTRRTHF-LI-----NTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPL 78 (718)
Q Consensus 5 a~~~Ak~e~K~ii-~y-----~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~ 78 (718)
.++...++++.++ .. +||++|+.+.+ .| +-++-.|..|-| ++.|++.+.+ ...+|..++|.
T Consensus 9 ~~~~~i~~~~vvvf~~g~~~~~~C~~C~~~~~-~L------~~~~i~~~~vdi--~~~~~~~~~l----~~~~g~~~vP~ 75 (105)
T 2yan_A 9 RLKVLTNKASVMLFMKGNKQEAKCGFSKQILE-IL------NSTGVEYETFDI--LEDEEVRQGL----KAYSNWPTYPQ 75 (105)
T ss_dssp HHHHHHTSSSEEEEESBCSSSBCTTHHHHHHH-HH------HHHTCCCEEEEG--GGCHHHHHHH----HHHHTCCSSCE
T ss_pred HHHHHhccCCEEEEEecCCCCCCCccHHHHHH-HH------HHCCCCeEEEEC--CCCHHHHHHH----HHHHCCCCCCe
Confidence 4555556665443 23 79999998663 22 223445655544 4555544333 23478889998
Q ss_pred EEEeCCCCcee
Q 005023 79 SVFLSPDLKPL 89 (718)
Q Consensus 79 ~vfl~p~g~p~ 89 (718)
. |+ +|+.+
T Consensus 76 v-~i--~g~~i 83 (105)
T 2yan_A 76 L-YV--KGELV 83 (105)
T ss_dssp E-EE--TTEEE
T ss_pred E-EE--CCEEE
Confidence 7 44 67766
No 221
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=95.33 E-value=0.034 Score=55.16 Aligned_cols=23 Identities=17% Similarity=0.293 Sum_probs=20.0
Q ss_pred cCCCCCCcEEEeCCCCceeeccc
Q 005023 71 YGGGGWPLSVFLSPDLKPLMGGT 93 (718)
Q Consensus 71 ~g~~GwP~~vfl~p~g~p~~~~~ 93 (718)
+|..++|++++++++|++++.+.
T Consensus 139 ~~v~~~P~~~liD~~G~i~~~g~ 161 (218)
T 3u5r_E 139 YGAACTPDFFLYDRERRLVYHGQ 161 (218)
T ss_dssp HTCCEESEEEEECTTCBEEEEEC
T ss_pred cCCCCCCeEEEECCCCcEEEecc
Confidence 68889999999999999997543
No 222
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=95.31 E-value=0.016 Score=54.16 Aligned_cols=17 Identities=0% Similarity=-0.062 Sum_probs=14.6
Q ss_pred CCCCcEEEeCCCCceeec
Q 005023 74 GGWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 74 ~GwP~~vfl~p~g~p~~~ 91 (718)
.+.|++++++ +|+.+..
T Consensus 136 ~~~P~~~lid-~G~i~~~ 152 (172)
T 2k6v_A 136 DHTATTFVVK-EGRLVLL 152 (172)
T ss_dssp EECCCEEEEE-TTEEEEE
T ss_pred ecCCEEEEEE-CCEEEEE
Confidence 4789999999 9998853
No 223
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=95.21 E-value=0.039 Score=48.03 Aligned_cols=69 Identities=20% Similarity=0.362 Sum_probs=41.8
Q ss_pred hcCCcE-EEEcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCcee
Q 005023 11 KTRRTH-FLINTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPL 89 (718)
Q Consensus 11 ~e~K~i-i~y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p~ 89 (718)
++++.+ ++.+||++|+.+.. +.+.++-.|-.|.||..+..+... +...+..++|..+.|+.++ + +|+.+
T Consensus 20 ~~~~v~ly~~~~Cp~C~~ak~-------~L~~~~i~y~~vdI~~~~~~~~~~-~~~~l~~~~g~~~vP~l~i-~-~~~~i 89 (103)
T 3nzn_A 20 DRGKVIMYGLSTCVWCKKTKK-------LLTDLGVDFDYVYVDRLEGKEEEE-AVEEVRRFNPSVSFPTTII-N-DEKAI 89 (103)
T ss_dssp CCSCEEEEECSSCHHHHHHHH-------HHHHHTBCEEEEEGGGCCHHHHHH-HHHHHHHHCTTCCSCEEEE-T-TTEEE
T ss_pred CCCeEEEEcCCCCchHHHHHH-------HHHHcCCCcEEEEeeccCcccHHH-HHHHHHHhCCCCccCEEEE-C-CCEEE
Confidence 334443 34589999999762 334556678888887643222222 2333344679999999776 2 23555
No 224
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=95.02 E-value=0.04 Score=45.10 Aligned_cols=56 Identities=16% Similarity=0.236 Sum_probs=35.5
Q ss_pred EEEcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCcee
Q 005023 17 FLINTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPL 89 (718)
Q Consensus 17 i~y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p~ 89 (718)
++.+||++|+.+.. .++ .++-.|. +||.++.|++.+.+.+ +|..+.|+.+ . +|+.+
T Consensus 6 f~~~~C~~C~~~~~-~l~------~~~i~~~--~vdi~~~~~~~~~~~~-----~g~~~vP~~~-~--~g~~~ 61 (81)
T 1h75_A 6 YTRNDCVQCHATKR-AME------NRGFDFE--MINVDRVPEAAEALRA-----QGFRQLPVVI-A--GDLSW 61 (81)
T ss_dssp EECTTCHHHHHHHH-HHH------HTTCCCE--EEETTTCHHHHHHHHH-----TTCCSSCEEE-E--TTEEE
T ss_pred EcCCCChhHHHHHH-HHH------HCCCCeE--EEECCCCHHHHHHHHH-----hCCCccCEEE-E--CCEEE
Confidence 44589999999763 222 2343454 4666666665554332 6889999874 4 67765
No 225
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=94.94 E-value=0.051 Score=50.73 Aligned_cols=76 Identities=14% Similarity=0.075 Sum_probs=43.2
Q ss_pred cCCc-EEE----EcCCchhhhhhccccCcHHHHHHhh-cccEEEEecCCCCcchHHHHHH--------------HHHHhc
Q 005023 12 TRRT-HFL----INTCHWCHVMEVESFEDEGVAKLLN-DWFVSIKVDREERPDVDKVYMT--------------YVQALY 71 (718)
Q Consensus 12 e~K~-ii~----y~~C~wChvM~~esf~d~~va~~ln-~~Fv~vkvD~ee~pd~d~~y~~--------------~~q~~~ 71 (718)
.+|+ +++ .+||..|..+...- .++.+.+. +++..|-|+.+. |+.-+.|.+ .+...+
T Consensus 27 ~gk~~vvl~F~~a~~C~~C~~~~~~l---~~~~~~~~~~~v~vv~vs~d~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 102 (161)
T 3drn_A 27 IGKHNIVLYFYPKDDTPGSTREASAF---RDNWDLLKDYDVVVIGVSSDD-INSHKRFKEKYKLPFILVSDPDKKIRELY 102 (161)
T ss_dssp TTTSEEEEEECSCTTCHHHHHHHHHH---HHTHHHHHTTCEEEEEEESCC-HHHHHHHHHHTTCCSEEEECTTSHHHHHT
T ss_pred cCCCCEEEEEEcCCCCCchHHHHHHH---HHHHHHHHHcCCEEEEEeCCC-HHHHHHHHHHhCCCceEEECCcHHHHHHc
Confidence 4665 654 47899998865422 22333332 345555555543 221111111 111236
Q ss_pred CCCC----CCcEEEeCCCCceeec
Q 005023 72 GGGG----WPLSVFLSPDLKPLMG 91 (718)
Q Consensus 72 g~~G----wP~~vfl~p~g~p~~~ 91 (718)
|..| .|++++++++|+.+..
T Consensus 103 ~v~~~~~~~P~~~lid~~G~i~~~ 126 (161)
T 3drn_A 103 GAKGFILPARITFVIDKKGIIRHI 126 (161)
T ss_dssp TCCCSSSCCCEEEEECTTSBEEEE
T ss_pred CCCCcCcccceEEEECCCCEEEEE
Confidence 7778 9999999999999864
No 226
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=94.90 E-value=2.2 Score=47.88 Aligned_cols=284 Identities=13% Similarity=0.130 Sum_probs=156.7
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHHcc------CChHHHHHHHHHHHHHHHhcc-CCCCceeeeccCCcccccCcccccC
Q 005023 242 WHVPHFEKMLYDQGQLANVYLDAFSLT------KDVFYSYICRDILDYLRRDMI-GPGGEIFSAEDADSAETEGATRKKE 314 (718)
Q Consensus 242 W~vPHFEKmLyDnA~ll~~ya~Ay~~t------~~~~y~~~A~~~~~~l~~~m~-~p~Ggf~sa~DADs~~~~~~~~~~E 314 (718)
-.|+-||--. ++|-.++-||.++ +++.|++.|.+..+-|+--+- .|.|-=|+..+-.+... +.
T Consensus 93 ~~VsvFETtI----R~LGGLLSAy~Ls~~~~~~~d~~lL~kA~dLadrLlpAFd~TptgiP~~~vnl~~g~~-----~~- 162 (511)
T 1dl2_A 93 AEVNVFETTI----RMLGGLLSAYHLSDVLEVGNKTVYLNKAIDLGDRLALAFLSTQTGIPYSSINLHSGQA-----VK- 162 (511)
T ss_dssp SEEEHHHHHH----HHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHGGGGSSSSSCCCSEEETTTCCE-----EC-
T ss_pred ceechhheeh----hhhhhhhhHHHhcccccCCCcHHHHHHHHHHHHHHHHhhcCCCCCCCCceeecccCCC-----CC-
Confidence 3577788655 4788888888888 999999999999999998777 67765444433221000 00
Q ss_pred CceEeechHHHHHHhchhHHHHHHHhcccCCCCcCCCCCCCCCCccCCcceeeccCCc----hHHHHhcCCCHHHHHHHH
Q 005023 315 GAFYVWTSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDS----SASASKLGMPLEKYLNIL 390 (718)
Q Consensus 315 G~yY~Wt~~Ei~~~L~~~~~~~~~~~~v~~~Gn~~~~~~~dp~~~~eg~nvL~~~~~~----~~~a~~~g~~~~~~~~~l 390 (718)
--|. .|..++.-..++ ..++...| .....+..
T Consensus 163 ---~~~~---------------------------------------~~~s~~Ae~gSl~LEF~~LS~LTG--d~~Y~~~a 198 (511)
T 1dl2_A 163 ---NHAD---------------------------------------GGASSTAEFTTLQMEFKYLAYLTG--NRTYWELV 198 (511)
T ss_dssp ---CSSG---------------------------------------GGCEEHHHHSSCHHHHHHHHHHHT--CHHHHHHH
T ss_pred ---CCCC---------------------------------------CcccccccccceeeeHHHHHHHHC--ChHHHHHH
Confidence 0011 001111111111 01122222 12344455
Q ss_pred HHHHHHHHhhhcc--------------CCCCCCCchhhhchHHHHH---HHHHHHHHHhhhhhhhhcccCCCCCCChHHH
Q 005023 391 GECRRKLFDVRSK--------------RPRPHLDDKVIVSWNGLVI---SSFARASKILKSEAESAMFNFPVVGSDRKEY 453 (718)
Q Consensus 391 ~~~r~~L~~~R~~--------------R~~P~~Ddkilt~WNgl~I---~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~ 453 (718)
+.+.+.|.+.|.. +.--+.+. ..+|.|..= .=|.+.+..+++ +.|
T Consensus 199 ~r~~~~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~--~~~lGa~~DS~YEYLlK~~il~~d----------------~~y 260 (511)
T 1dl2_A 199 ERVYEPLYKNNDLLNTYDGLVPIYTFPDTGKFGAS--TIRFGSRGDSFYEYLLKQYLLTHE----------------TLY 260 (511)
T ss_dssp HTTHHHHHHHHTHHHHHTTCCBSEECTTTCCBCSC--CBCSSTTTHHHHHHHHHHHHHHCC----------------HHH
T ss_pred HHHHHHHHhcccccCCCCCCcceEEcCCCCCccCC--eeeecCCCCcHHHHHHHHHHhcCC----------------HHH
Confidence 5556666655410 00111211 234544432 356677777765 789
Q ss_pred HHHHHHHHHHHHHhccccC--CCeEEEe-ecCCC-CCCCCCcccHHHHHHHHHHHHHHcC------------ChHHHHHH
Q 005023 454 MEVAESAASFIRRHLYDEQ--THRLQHS-FRNGP-SKAPGFLDDYAFLISGLLDLYEFGS------------GTKWLVWA 517 (718)
Q Consensus 454 l~~A~~~~~~l~~~~~d~~--~g~l~~~-~~~g~-~~~~~~l~DyA~li~all~LYeaTg------------d~~~L~~A 517 (718)
+++=.++++-+.+|+.... .+.++.. ...+. .......+--+.++-|++.|.-..+ ++++++.|
T Consensus 261 ~~m~~~a~~~i~~~L~~~~~~~~~~~~~~~~~~~~g~~~~~~~hL~cF~gG~~aLg~~~~~~~~~a~~~~~~~~~~~~~a 340 (511)
T 1dl2_A 261 YDLYRKSMEGMKKHLLAQSKPSSLWYIGEREQGLHGQLSPKMDHLVCFMGGLLASGSTEGLSIHEARRRPFFSKSDWDLA 340 (511)
T ss_dssp HHHHHHHHHHHHHHTEEECTTTCCEEECBBTTCTTSCCBCEEEGGGGGHHHHHHHHHHTTCCHHHHTTSTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCCcEEEEEeecCCCCccccccchhhhchhHHHHhccccCCChhhhhhcccccHHHHHHH
Confidence 9999999999999986431 2334332 32111 1112223444666788888876322 34799999
Q ss_pred HHHHHHHHHhcccccCCc----cccCCCCC----------CccccccccCCCCCCCChHHHHHHHHHHHHHHhCCCCchH
Q 005023 518 IELQNTQDELFLDREGGG----YFNTTGED----------PSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAGSKSDY 583 (718)
Q Consensus 518 ~~L~~~~~~~F~D~~~Gg----~f~t~~~~----------~~l~~r~k~~~D~a~PS~ns~~a~~LlrL~~lt~~~~~~~ 583 (718)
.+|.+.+...+....+|- |....... .+..+++ .|...|= --..++.+.-|+++||+ +.
T Consensus 341 ~~l~~tC~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~d~~~~~---~d~~y~L-RPE~iES~fylyR~TgD---~~ 413 (511)
T 1dl2_A 341 KGITDTCYQMYKQSSSGLAPEIVVFNDGNIKQDGWWRSSVGDFFVKP---LDRHNLQ-RPETVESIMFMYHLSHD---HK 413 (511)
T ss_dssp HHHHHHHHHHHHTSTTSCCCSEEEECCSCCC-CCCEECSSSSEEECG---GGCCBCC-CCHHHHHHHHHHHHHCC---TH
T ss_pred HHHHHHHHHHHhcCccCCCceEEEeecCCccccccccccccceeecc---CCcccCc-CHHHHHHHHHHHHHcCC---HH
Confidence 999999987765444442 22221110 0110110 0100000 01578899999999996 89
Q ss_pred HHHHHHHHHHHHHHHHHhhhhh
Q 005023 584 YRQNAEHSLAVFETRLKDMAMA 605 (718)
Q Consensus 584 y~e~a~~~l~~~~~~i~~~p~~ 605 (718)
|++.+.++++++.... +.+.+
T Consensus 414 yre~gw~~f~ai~k~~-rt~~G 434 (511)
T 1dl2_A 414 YREWGAEIATSFFENT-CVDCN 434 (511)
T ss_dssp HHHHHHHHHHHHHHHH-EESTT
T ss_pred HHHHHHHHHHHHHHHh-ccccC
Confidence 9999999999976543 44444
No 227
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=94.83 E-value=0.027 Score=54.28 Aligned_cols=19 Identities=16% Similarity=0.113 Sum_probs=15.4
Q ss_pred CCCCC---cEEEeCCCCceeec
Q 005023 73 GGGWP---LSVFLSPDLKPLMG 91 (718)
Q Consensus 73 ~~GwP---~~vfl~p~g~p~~~ 91 (718)
..++| ++++++++|+++..
T Consensus 143 ~~~iP~~~~~~liD~~G~i~~~ 164 (187)
T 3dwv_A 143 TKAIKWNFTSFLIDRDGVPVER 164 (187)
T ss_dssp SSSCCSTTCEEEECTTSCEEEE
T ss_pred CCccccceeEEEECCCCCEEEE
Confidence 34566 99999999999864
No 228
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=94.65 E-value=0.025 Score=47.11 Aligned_cols=59 Identities=15% Similarity=0.071 Sum_probs=38.1
Q ss_pred EEEcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCC-----CCCCcEEEeCCCCcee
Q 005023 17 FLINTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGG-----GGWPLSVFLSPDLKPL 89 (718)
Q Consensus 17 i~y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~-----~GwP~~vfl~p~g~p~ 89 (718)
++.+||++|+.+.. +.+.++-.|-.+.||..+.|.... ....++|. .+.|+.++ +|+.+
T Consensus 9 y~~~~Cp~C~~~~~-------~L~~~~i~~~~~~vd~~~~~~~~~----el~~~~g~~~~~~~~vP~i~i---~g~~i 72 (89)
T 3msz_A 9 YTRNGCPYCVWAKQ-------WFEENNIAFDETIIDDYAQRSKFY----DEMNQSGKVIFPISTVPQIFI---DDEHI 72 (89)
T ss_dssp EECTTCHHHHHHHH-------HHHHTTCCCEEEECCSHHHHHHHH----HHHHTTTCCSSCCCSSCEEEE---TTEEE
T ss_pred EEcCCChhHHHHHH-------HHHHcCCCceEEEeecCCChhHHH----HHHHHhCCCCCCCCccCEEEE---CCEEE
Confidence 34589999998753 334555667777777765433211 12335777 89999865 77766
No 229
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=94.63 E-value=0.046 Score=61.72 Aligned_cols=101 Identities=11% Similarity=0.148 Sum_probs=67.1
Q ss_pred cccHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcccccCCccccCCC-CCCccccccccCCCCCCCChHHHHHHHH
Q 005023 491 LDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDREGGGYFNTTG-EDPSVLLRVKEDHDGAEPSGNSVSVINL 569 (718)
Q Consensus 491 l~DyA~li~all~LYeaTgd~~~L~~A~~L~~~~~~~F~D~~~Gg~f~t~~-~~~~l~~r~k~~~D~a~PS~ns~~a~~L 569 (718)
-|-..=.+-|||..|.+++|+.+|++|++|.+.+..-| |..+|--+..-+ ... ....+... ...+.+..+.+...+
T Consensus 168 FETtIR~LGGLLSAy~Lsgd~~lL~kA~dLadrLlpAF-dTptgiP~~~vnl~~g-~~~~~~~~-~~s~lAe~GSl~LEF 244 (538)
T 1x9d_A 168 FESTIRILGGLLSAYHLSGDSLFLRKAEDFGNRLMPAF-RTPSKIPYSDVNIGTG-VAHPPRWT-SDSTVAEVTSIQLEF 244 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHGGGG-CSTTSCCCSEEETTTC-CEECCTTC-SEEEHHHHHSSHHHH
T ss_pred hheehhhhhhhhhHHHhcCCHHHHHHHHHHHHHHHHhh-cCCCCCCcceeeeccc-ccCCCCcC-CCceeccccceeeeH
Confidence 35556678999999999999999999999999999888 555663222100 000 00000000 011222333345579
Q ss_pred HHHHHHhCCCCchHHHHHHHHHHHHHHH
Q 005023 570 VRLASIVAGSKSDYYRQNAEHSLAVFET 597 (718)
Q Consensus 570 lrL~~lt~~~~~~~y~e~a~~~l~~~~~ 597 (718)
.+|+++||+ +.|.+.|++++..+..
T Consensus 245 ~~LS~LTGd---~~Y~~~a~r~~~~l~~ 269 (538)
T 1x9d_A 245 RELSRLTGD---KKFQEAVEKVTQHIHG 269 (538)
T ss_dssp HHHHHHHCC---THHHHHHHHHHHHHHT
T ss_pred HHHHHHhCC---cHHHHHHHHHHHHHHh
Confidence 999999996 8999999999888754
No 230
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=94.63 E-value=0.074 Score=52.72 Aligned_cols=33 Identities=27% Similarity=0.401 Sum_probs=21.1
Q ss_pred cCCCCCCcEEEeCCCCceeecccccCCCCCCCcccHHHHHHHH
Q 005023 71 YGGGGWPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRKV 113 (718)
Q Consensus 71 ~g~~GwP~~vfl~p~g~p~~~~~y~p~~~~~~~~~f~~~L~~i 113 (718)
.|+.|+|+++|. +|+.+ .+|.|++ .|.++|+.+
T Consensus 177 ~gV~gtPt~v~~--dG~~~--~G~~~~~------~l~~~l~~~ 209 (216)
T 1eej_A 177 LGVSGTPAVVLS--NGTLV--PGYQPPK------EMKEFLDEH 209 (216)
T ss_dssp HTCCSSSEEECT--TSCEE--ESCCCHH------HHHHHHHHH
T ss_pred cCCCccCEEEEc--CCeEe--cCCCCHH------HHHHHHHHh
Confidence 589999998653 57665 3455543 466655544
No 231
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=94.61 E-value=0.048 Score=49.14 Aligned_cols=62 Identities=8% Similarity=-0.021 Sum_probs=43.3
Q ss_pred CcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCceee
Q 005023 14 RTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLM 90 (718)
Q Consensus 14 K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p~~ 90 (718)
+++++ .+||..|+.|.. .| .++++... +..-+|||.++.+ + -+++.+.|+.+|+- +|+++.
T Consensus 24 ~~vvv~F~a~wc~~C~~~~p-~l--~~la~~~~-~v~f~kvd~d~~~---~--------~~~v~~~PT~~~fk-~G~~v~ 87 (118)
T 3evi_A 24 VWVIIHLYRSSIPMCLLVNQ-HL--SLLARKFP-ETKFVKAIVNSCI---Q--------HYHDNCLPTIFVYK-NGQIEA 87 (118)
T ss_dssp CEEEEEEECTTSHHHHHHHH-HH--HHHHHHCT-TSEEEEEEGGGTS---T--------TCCGGGCSEEEEEE-TTEEEE
T ss_pred CeEEEEEeCCCChHHHHHHH-HH--HHHHHHCC-CCEEEEEEhHHhH---H--------HCCCCCCCEEEEEE-CCEEEE
Confidence 37765 389999999994 23 24554433 3566788888752 1 15778999998885 899885
Q ss_pred c
Q 005023 91 G 91 (718)
Q Consensus 91 ~ 91 (718)
.
T Consensus 88 ~ 88 (118)
T 3evi_A 88 K 88 (118)
T ss_dssp E
T ss_pred E
Confidence 3
No 232
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=94.58 E-value=0.074 Score=43.44 Aligned_cols=57 Identities=16% Similarity=0.271 Sum_probs=35.4
Q ss_pred EEEcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCcee
Q 005023 17 FLINTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPL 89 (718)
Q Consensus 17 i~y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p~ 89 (718)
++.+||++|+.+.. . .+.++-.|..|.|| +.|+....+.+ .+|..+.|+.++ +|+.+
T Consensus 6 y~~~~C~~C~~~~~-~------l~~~~i~~~~~~i~--~~~~~~~~~~~----~~~~~~vP~l~~---~g~~i 62 (82)
T 1fov_A 6 YTKETCPYCHRAKA-L------LSSKGVSFQELPID--GNAAKREEMIK----RSGRTTVPQIFI---DAQHI 62 (82)
T ss_dssp EECSSCHHHHHHHH-H------HHHHTCCCEEEECT--TCSHHHHHHHH----HHSSCCSCEEEE---TTEEE
T ss_pred EECCCChhHHHHHH-H------HHHCCCCcEEEECC--CCHHHHHHHHH----HhCCCCcCEEEE---CCEEE
Confidence 45689999998762 2 22334457666555 44554433332 368999998753 67766
No 233
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=94.54 E-value=0.16 Score=48.19 Aligned_cols=32 Identities=13% Similarity=0.148 Sum_probs=21.8
Q ss_pred CcEEEeCCCCceeecc---cccCCCCCCCcccHHHHHHHHH
Q 005023 77 PLSVFLSPDLKPLMGG---TYFPPEDKYGRPGFKTILRKVK 114 (718)
Q Consensus 77 P~~vfl~p~g~p~~~~---~y~p~~~~~~~~~f~~~L~~i~ 114 (718)
|.+++++++|+..+.. ...+ .+.+.++|+.+.
T Consensus 130 p~~~lid~~G~I~~~~~g~~~~~------~~~~~~~l~~l~ 164 (175)
T 1xvq_A 130 RAIVVIGADGNVAYTELVPEIAQ------EPNYEAALAALG 164 (175)
T ss_dssp SEEEEECTTSBEEEEEECSBTTC------CCCHHHHHHHHH
T ss_pred ceEEEECCCCeEEEEEECCCcCC------CCCHHHHHHHHH
Confidence 9999999999998643 2222 235777776554
No 234
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=94.51 E-value=2.3 Score=46.86 Aligned_cols=110 Identities=19% Similarity=0.212 Sum_probs=69.8
Q ss_pred cCCCCCCC---CCCCChhHHH--HH-HHhhh---hhcccCCCCCCHHHHHHHHHHHHHHHhCCCcccCCCcEEEEecCC-
Q 005023 171 RFGGFGSA---PKFPRPVEIQ--MM-LYHSK---KLEDTGKSGEASEGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDE- 240 (718)
Q Consensus 171 ~~GGfg~a---pKFP~~~~l~--~L-l~~~~---~~~~~~~~~~~~~~~~~~~~TL~~m~~gGi~D~v~GGF~RYsvD~- 240 (718)
..|||-.| -||-.|+... .| +.+.. .... ..+-+++++.+..-++-|.+ .++.. |+|+ +.|..
T Consensus 48 l~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~~~~~~~---~~~~~d~ldeikwg~D~llk--~~~~~-g~~y-~qVgd~ 120 (433)
T 1ks8_A 48 LTGGYFDAGDFVKFGFPMAYTATVLAWGLIDFEAGYSS---AGALDDGRKAVKWATDYFIK--AHTSQ-NEFY-GQVGQG 120 (433)
T ss_dssp CCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHTHHHHHH---TTCHHHHHHHHHHHHHHHHH--HCCBT-TBEE-EEESCH
T ss_pred CCCceeECCCCCeeccchHHHHHHHHHHHHHhHHhhhc---CCchHHHHHHHHHHHHHHHH--hccCC-CcEE-EEeCCC
Confidence 56999554 6776665432 22 22211 1111 12347899999998888887 55553 6676 56633
Q ss_pred -----CCCCCCCcc-------------hHHHHHHHHHHHHHHHHccCC--h----HHHHHHHHHHHHHHHh
Q 005023 241 -----RWHVPHFEK-------------MLYDQGQLANVYLDAFSLTKD--V----FYSYICRDILDYLRRD 287 (718)
Q Consensus 241 -----~W~vPHFEK-------------mLyDnA~ll~~ya~Ay~~t~~--~----~y~~~A~~~~~~l~~~ 287 (718)
-|..|.-.. ---..+..+-+++.|+++.++ + .+++.|++..+|..++
T Consensus 121 ~~Dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~a~~~AAalA~as~vfk~~D~~yA~~~L~~A~~~~~fa~~~ 191 (433)
T 1ks8_A 121 DADHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVFRNVDGTYSNNLLTHARQLFDFANNY 191 (433)
T ss_dssp HHHHTCCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHS
T ss_pred CcCCcccCCHhhCCCCCceeeccCCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHC
Confidence 567665321 133578899999999999874 4 4567788888988873
No 235
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=94.49 E-value=0.034 Score=45.85 Aligned_cols=63 Identities=19% Similarity=0.153 Sum_probs=36.1
Q ss_pred EEEcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcC--CCCCCcEEEeCCCCceee
Q 005023 17 FLINTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYG--GGGWPLSVFLSPDLKPLM 90 (718)
Q Consensus 17 i~y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g--~~GwP~~vfl~p~g~p~~ 90 (718)
++.+||++|+.|.. .+++ +++. +.++-.++||.++.|...+-+. ..+| ..+.|+. |+ +|+.+.
T Consensus 6 f~~~~C~~C~~~~~-~l~~--l~~~-~~~i~~~~vdi~~~~~~~~~l~----~~~~~~~~~vP~i-~~--~g~~i~ 70 (85)
T 1ego_A 6 FGRSGCPYCVRAKD-LAEK--LSNE-RDDFQYQYVDIRAEGITKEDLQ----QKAGKPVETVPQI-FV--DQQHIG 70 (85)
T ss_dssp ECCTTSTHHHHHHH-HHHH--HHHH-HSSCEEEEECHHHHTCCSHHHH----HHTCCCSCCSCEE-EE--TTEEEE
T ss_pred EeCCCCCCHHHHHH-HHHH--HHhc-CCCceEEEEecccChHHHHHHH----HHhCCCCceeCeE-EE--CCEEEE
Confidence 34589999999874 3332 2222 2345566777665442211111 1256 7899997 44 677763
No 236
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=94.39 E-value=0.11 Score=49.36 Aligned_cols=43 Identities=21% Similarity=0.375 Sum_probs=25.5
Q ss_pred hhhcCCcEE---EEcCCc-hhhhhhccccCcHHHHHHhh---c--ccEEEEecCC
Q 005023 9 GTKTRRTHF---LINTCH-WCHVMEVESFEDEGVAKLLN---D--WFVSIKVDRE 54 (718)
Q Consensus 9 Ak~e~K~ii---~y~~C~-wChvM~~esf~d~~va~~ln---~--~Fv~vkvD~e 54 (718)
+.=.+|+++ +|.||. ||..+-.+- +++.+.+. . .||.|-||.+
T Consensus 28 ~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l---~~l~~~~~~~~~~v~~v~isvDp~ 79 (170)
T 4hde_A 28 KDLKGKVWVADFMFTNCQTVCPPMTANM---AKLQKMAKEEKLDVQFVSFSVDPD 79 (170)
T ss_dssp HHHTTSCEEEEEECTTCSSSHHHHHHHH---HHHHHHHHHTTCCCEEEEEESCTT
T ss_pred HHhCCCEEEEEEECCCCCCcccHHHHHH---HHHHHhhhcccccceeEeeecCcc
Confidence 334578875 479995 997654321 33444442 2 3677778754
No 237
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=94.38 E-value=0.1 Score=57.08 Aligned_cols=91 Identities=20% Similarity=0.179 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEeecCCCC-CC-CCCcccHHHHH
Q 005023 421 VISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPS-KA-PGFLDDYAFLI 498 (718)
Q Consensus 421 ~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~~g~~-~~-~~~l~DyA~li 498 (718)
.+.++++|+++.+| ++....+..++..+----+++ ..|.. .+ .....+-.+++
T Consensus 378 yll~~vra~~~s~D----------------~~Lw~~~~~ma~~~~lgdi~~---------~~~~~~~~~~~~~~~sp~lL 432 (543)
T 2v8i_A 378 FLISYARAYAIDND----------------PLLWKVARGIANDQGLGDIGT---------APGKEVKVNMDTTNSDPYAL 432 (543)
T ss_dssp HHHHHHHHHHHSCC----------------HHHHHHHHHHHHHTTCEECTT---------BTTBSCEECTTCCCCCHHHH
T ss_pred hhHHHHHHHHcCCC----------------HHHHHHHHHHHhhCCccccCC---------CcCcccccccCCCCcCHHHH
Confidence 57899999999988 677777777664331111111 11211 11 12334556889
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHHhcccccCCccccC
Q 005023 499 SGLLDLYEFGSGTKWLVWAIELQNTQDELFLDREGGGYFNT 539 (718)
Q Consensus 499 ~all~LYeaTgd~~~L~~A~~L~~~~~~~F~D~~~Gg~f~t 539 (718)
.|+|+||++|+++.|++.|..+.+.+.+.-++ + |||-.
T Consensus 433 ~allEL~~atq~~~~l~lA~~~g~nl~~~~~~--~-G~Fv~ 470 (543)
T 2v8i_A 433 FALLDLYHASQVADYRKLAEKIGDNIIKIRYI--D-GFFMA 470 (543)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEE--T-TEECS
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhc--C-ceecC
Confidence 99999999999999999999999998865543 3 45554
No 238
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=94.36 E-value=0.043 Score=52.42 Aligned_cols=16 Identities=0% Similarity=-0.230 Sum_probs=14.2
Q ss_pred CCcEEEeCCCCceeec
Q 005023 76 WPLSVFLSPDLKPLMG 91 (718)
Q Consensus 76 wP~~vfl~p~g~p~~~ 91 (718)
.|++++++++|+++..
T Consensus 150 ~P~~~lid~~G~i~~~ 165 (183)
T 2obi_A 150 NFTKFLIDKNGCVVKR 165 (183)
T ss_dssp TTCEEEECTTSCEEEE
T ss_pred cceEEEECCCCCEEEE
Confidence 5999999999999864
No 239
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=94.36 E-value=0.066 Score=59.79 Aligned_cols=102 Identities=11% Similarity=0.087 Sum_probs=65.6
Q ss_pred cccHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcccccCCccccC-CCCCCccccccccCCC-CCCCChHHHHHHH
Q 005023 491 LDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDREGGGYFNT-TGEDPSVLLRVKEDHD-GAEPSGNSVSVIN 568 (718)
Q Consensus 491 l~DyA~li~all~LYeaTgd~~~L~~A~~L~~~~~~~F~D~~~Gg~f~t-~~~~~~l~~r~k~~~D-~a~PS~ns~~a~~ 568 (718)
-|-..=.+-|||..|.+++|+.+|++|++|.+.+..-| |..+|--+.. .-... .........+ ..+.+..+.+...
T Consensus 104 FETtIR~LGGLLSAy~Lsgd~~lL~kA~dLad~LlpAF-dTptgiP~~~vnl~~g-~~~~~~~~~~~~s~lAe~gsl~LE 181 (478)
T 1nxc_A 104 FEVNIRFVGGLLSAYYLSGEEIFRKKAVELGVKLLPAF-HTPSGIPWALLNMKSG-IGRNWPWASGGSSILAEFGTLHLE 181 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHGGGG-CSSSSCCCSEEETTTC-CEECCTTSGGGCEEHHHHTTCHHH
T ss_pred hheehhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHhh-cCCCCCCcceeecccc-cCCCCcccCCCCcccccccchhhh
Confidence 34555678899999999999999999999999999888 5556532211 00000 0000000000 0112222334456
Q ss_pred HHHHHHHhCCCCchHHHHHHHHHHHHHHH
Q 005023 569 LVRLASIVAGSKSDYYRQNAEHSLAVFET 597 (718)
Q Consensus 569 LlrL~~lt~~~~~~~y~e~a~~~l~~~~~ 597 (718)
+.+|+++||+ +.|.+.|+++.+.+..
T Consensus 182 F~~LS~lTGd---~~Y~~~a~~~~~~l~~ 207 (478)
T 1nxc_A 182 FMHLSHLSGD---PVFAEKVMKIRTVLNK 207 (478)
T ss_dssp HHHHHHHHCC---THHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCC---hHHHHHHHHHHHHHHh
Confidence 8999999996 8999999988877653
No 240
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=94.36 E-value=0.072 Score=54.19 Aligned_cols=70 Identities=11% Similarity=0.191 Sum_probs=48.4
Q ss_pred HHhhhhhcCCcEEEE--cCCchhhhhhccccCcHHHHHHhh--cccEEEEecCCC-----CcchHHHHHHHHHHhcCCC-
Q 005023 5 SFCGGTKTRRTHFLI--NTCHWCHVMEVESFEDEGVAKLLN--DWFVSIKVDREE-----RPDVDKVYMTYVQALYGGG- 74 (718)
Q Consensus 5 a~~~Ak~e~K~ii~y--~~C~wChvM~~esf~d~~va~~ln--~~Fv~vkvD~ee-----~pd~d~~y~~~~q~~~g~~- 74 (718)
-+....+.++++|+. +.|.||. |. ..| .++++.+. .+++.++||.++ .|++.+. +|+.
T Consensus 14 nF~~~i~~~~~vlV~FyA~~pWCg-l~-P~~--e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~--------~~V~~ 81 (240)
T 2qc7_A 14 TFYKVIPKSKFVLVKFDTQYPYGE-KQ-DEF--KRLAENSASSDDLLVAEVGISDYGDKLNMELSEK--------YKLDK 81 (240)
T ss_dssp HHHHHGGGCSEEEEEECCSSCCSH-HH-HHH--HHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHH--------TTCCG
T ss_pred HHHHHHcCCCCEEEEEeCCCCCCc-ch-HHH--HHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHH--------cCCCC
Confidence 345555678888874 4469998 55 344 35666664 468889999654 6666554 6888
Q ss_pred -CCCcEEEeCCCCc
Q 005023 75 -GWPLSVFLSPDLK 87 (718)
Q Consensus 75 -GwP~~vfl~p~g~ 87 (718)
|+|+.+|+ ++|+
T Consensus 82 ~~~PTl~~f-~~G~ 94 (240)
T 2qc7_A 82 ESYPVFYLF-RDGD 94 (240)
T ss_dssp GGCSEEEEE-ETTC
T ss_pred CCCCEEEEE-eCCC
Confidence 99999988 4666
No 241
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=94.27 E-value=0.097 Score=48.39 Aligned_cols=39 Identities=8% Similarity=-0.113 Sum_probs=26.1
Q ss_pred cCCC----CCC--cEEEeCCCCceeecc-cccCCCCCCCcccHHHHHHHHH
Q 005023 71 YGGG----GWP--LSVFLSPDLKPLMGG-TYFPPEDKYGRPGFKTILRKVK 114 (718)
Q Consensus 71 ~g~~----GwP--~~vfl~p~g~p~~~~-~y~p~~~~~~~~~f~~~L~~i~ 114 (718)
+|.. |+| ++++++++|+.++.. +..+.+ +.+.++++.|.
T Consensus 111 ~~v~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~~-----~~~~~l~~~l~ 156 (160)
T 1xvw_A 111 YGVFNEQAGIANRGTFVVDRSGIIRFAEMKQPGEV-----RDQRLWTDALA 156 (160)
T ss_dssp TTCEETTTTEECSEEEEECTTSBEEEEEECCTTCC-----CCHHHHHHHHH
T ss_pred cCCccccCCCeeeeEEEECCCCeEEEEEecCCCCC-----CCHHHHHHHHH
Confidence 5655 899 999999999998643 333322 35666666554
No 242
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=94.25 E-value=0.052 Score=52.58 Aligned_cols=21 Identities=10% Similarity=0.001 Sum_probs=18.1
Q ss_pred cCCC-----CCCcEEEeCCCCceeec
Q 005023 71 YGGG-----GWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 71 ~g~~-----GwP~~vfl~p~g~p~~~ 91 (718)
+|.. +.|++++++++|+.++.
T Consensus 122 ~~v~~~~g~~~P~~~lid~~G~i~~~ 147 (195)
T 2bmx_A 122 AGVLNADGVADRVTFIVDPNNEIQFV 147 (195)
T ss_dssp HTCBCTTSSBCEEEEEECTTSBEEEE
T ss_pred hCCcccCCCccceEEEEcCCCeEEEE
Confidence 5666 89999999999999864
No 243
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=94.24 E-value=0.091 Score=48.09 Aligned_cols=76 Identities=14% Similarity=0.223 Sum_probs=44.2
Q ss_pred hhHHhhhhhcCCcEEE--EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEE
Q 005023 3 RRSFCGGTKTRRTHFL--INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSV 80 (718)
Q Consensus 3 ~~a~~~Ak~e~K~ii~--y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~v 80 (718)
.+.+++..+.++ |++ .+||++|+.+.+ .+++. .-++-.|..|.||.++.++- .+.+++.++|....|..+
T Consensus 4 ~~~~~~ii~~~~-Vvvysk~~Cp~C~~ak~-lL~~~---~~~~v~~~~idid~~~d~~~---~~~~l~~~~G~~tVP~If 75 (127)
T 3l4n_A 4 QKEYSLILDLSP-IIIFSKSTCSYSKGMKE-LLENE---YQFIPNYYIIELDKHGHGEE---LQEYIKLVTGRGTVPNLL 75 (127)
T ss_dssp HHHHHHHHTSCS-EEEEECTTCHHHHHHHH-HHHHH---EEEESCCEEEEGGGSTTHHH---HHHHHHHHHSCCSSCEEE
T ss_pred HHHHHHHHccCC-EEEEEcCCCccHHHHHH-HHHHh---cccCCCcEEEEecCCCCHHH---HHHHHHHHcCCCCcceEE
Confidence 456777777776 444 489999998652 11110 00133477777777643222 223344457888889875
Q ss_pred EeCCCCcee
Q 005023 81 FLSPDLKPL 89 (718)
Q Consensus 81 fl~p~g~p~ 89 (718)
| +|+.+
T Consensus 76 I---~G~~I 81 (127)
T 3l4n_A 76 V---NGVSR 81 (127)
T ss_dssp E---TTEEC
T ss_pred E---CCEEE
Confidence 4 56655
No 244
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=94.24 E-value=0.03 Score=55.55 Aligned_cols=32 Identities=25% Similarity=0.418 Sum_probs=21.0
Q ss_pred cCCCCCCcEEEeCCCCceeecccccCCCCCCCcccHHHHHHH
Q 005023 71 YGGGGWPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRK 112 (718)
Q Consensus 71 ~g~~GwP~~vfl~p~g~p~~~~~y~p~~~~~~~~~f~~~L~~ 112 (718)
.|+.|+|+.+| .||+.+ .++.|++ .|.++|+.
T Consensus 177 ~gV~gTPt~vi--~nG~~~--~G~~~~~------~l~~~l~~ 208 (211)
T 1t3b_A 177 FGVRGTPSIVT--STGELI--GGYLKPA------DLLRALEE 208 (211)
T ss_dssp HTCCSSCEEEC--TTSCCC--CSCCCHH------HHHHHHHH
T ss_pred cCCCcCCEEEE--eCCEEe--cCCCCHH------HHHHHHHh
Confidence 58999999887 688855 3455543 45555543
No 245
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=94.20 E-value=0.055 Score=49.52 Aligned_cols=76 Identities=11% Similarity=0.198 Sum_probs=41.3
Q ss_pred hHHhhhhhcCCcE-EEEcCCchhhhh-hccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEE
Q 005023 4 RSFCGGTKTRRTH-FLINTCHWCHVM-EVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVF 81 (718)
Q Consensus 4 ~a~~~Ak~e~K~i-i~y~~C~wChvM-~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vf 81 (718)
+.++...++++.+ +..+||++|+.+ . ..++..... +-.|..|.||.++ +-.. ....+...+|..++|.. |
T Consensus 28 ~~v~~~i~~~~Vvvy~~~~Cp~C~~a~k-~~L~~~~~~---~i~~~~vdvd~~~--~~~~-~~~~L~~~~g~~tVP~v-f 99 (129)
T 3ctg_A 28 AHVKDLIGQKEVFVAAKTYCPYCKATLS-TLFQELNVP---KSKALVLELDEMS--NGSE-IQDALEEISGQKTVPNV-Y 99 (129)
T ss_dssp HHHHHHHHHSSEEEEECTTCHHHHHHHH-HHHTTSCCC---GGGEEEEEGGGST--THHH-HHHHHHHHHSCCSSCEE-E
T ss_pred HHHHHHHcCCCEEEEECCCCCchHHHHH-HHHHhcCcc---CCCcEEEEccccC--CHHH-HHHHHHHHhCCCCCCEE-E
Confidence 4455566666643 335899999976 3 233221100 1346666666543 3222 22233445788899985 5
Q ss_pred eCCCCcee
Q 005023 82 LSPDLKPL 89 (718)
Q Consensus 82 l~p~g~p~ 89 (718)
+ +|+.+
T Consensus 100 i--~g~~i 105 (129)
T 3ctg_A 100 I--NGKHI 105 (129)
T ss_dssp E--TTEEE
T ss_pred E--CCEEE
Confidence 4 56666
No 246
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=94.14 E-value=0.15 Score=50.30 Aligned_cols=17 Identities=24% Similarity=0.106 Sum_probs=14.4
Q ss_pred CCCcEEEeCCCCceeec
Q 005023 75 GWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 75 GwP~~vfl~p~g~p~~~ 91 (718)
+.|++++++++|++...
T Consensus 172 ~~p~tflID~~G~i~~~ 188 (208)
T 2f8a_A 172 WNFEKFLVGPDGVPLRR 188 (208)
T ss_dssp STTCEEEECTTSCEEEE
T ss_pred cCceEEEEcCCCcEEEE
Confidence 34999999999999853
No 247
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=94.06 E-value=0.11 Score=45.15 Aligned_cols=57 Identities=18% Similarity=0.270 Sum_probs=35.2
Q ss_pred EEEcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhc-CCCCCCcEEEeCCCCcee
Q 005023 17 FLINTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALY-GGGGWPLSVFLSPDLKPL 89 (718)
Q Consensus 17 i~y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~-g~~GwP~~vfl~p~g~p~ 89 (718)
+.++||++|+.+.+ +-+.++-.|..|-| ++.|+..+.+. .++ |..+.|+. |+ +|+.+
T Consensus 21 y~~~~Cp~C~~ak~-------~L~~~~i~y~~idI--~~~~~~~~~l~----~~~~g~~~vP~i-fi--~g~~i 78 (99)
T 3qmx_A 21 YTWSTCPFCMRALA-------LLKRKGVEFQEYCI--DGDNEAREAMA----ARANGKRSLPQI-FI--DDQHI 78 (99)
T ss_dssp EECTTCHHHHHHHH-------HHHHHTCCCEEEEC--TTCHHHHHHHH----HHTTTCCCSCEE-EE--TTEEE
T ss_pred EEcCCChhHHHHHH-------HHHHCCCCCEEEEc--CCCHHHHHHHH----HHhCCCCCCCEE-EE--CCEEE
Confidence 34699999999763 23334555665554 45555444332 345 88999966 44 57766
No 248
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=93.97 E-value=0.12 Score=48.72 Aligned_cols=32 Identities=16% Similarity=0.250 Sum_probs=20.2
Q ss_pred cCCCCCCcEEEeCCCCceeecccccCCCCCCCcccHHHHHHHH
Q 005023 71 YGGGGWPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRKV 113 (718)
Q Consensus 71 ~g~~GwP~~vfl~p~g~p~~~~~y~p~~~~~~~~~f~~~L~~i 113 (718)
.|+.|+|+.+| +|+.+.| +.|.+ .|.++|+++
T Consensus 140 ~gv~gtPt~~i---~g~~~~G--~~~~~------~l~~~i~~~ 171 (175)
T 3gyk_A 140 LGFNGTPSFVV---EDALVPG--FVEQS------QLQDAVDRA 171 (175)
T ss_dssp HTCCSSSEEEE---TTEEECS--CCCHH------HHHHHHHHH
T ss_pred cCCccCCEEEE---CCEEeeC--CCCHH------HHHHHHHHH
Confidence 58899998877 6776643 33432 455555543
No 249
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=93.94 E-value=0.053 Score=61.03 Aligned_cols=103 Identities=16% Similarity=0.209 Sum_probs=66.8
Q ss_pred cccHHHHHHHHHHHHHHc------CChHHHHHHHHHHHHHHHhccc-ccCCccccCCC-CCCccccccccCCCCCCCChH
Q 005023 491 LDDYAFLISGLLDLYEFG------SGTKWLVWAIELQNTQDELFLD-REGGGYFNTTG-EDPSVLLRVKEDHDGAEPSGN 562 (718)
Q Consensus 491 l~DyA~li~all~LYeaT------gd~~~L~~A~~L~~~~~~~F~D-~~~Gg~f~t~~-~~~~l~~r~k~~~D~a~PS~n 562 (718)
-|-..=.+-|||..|.++ +|+.+|++|++|.+.+..-| | ..+|--|..-+ ... ............+.+..
T Consensus 98 FETtIR~LGGLLSAy~Ls~~~~~~~d~~lL~kA~dLadrLlpAF-d~TptgiP~~~vnl~~g-~~~~~~~~~~~s~~Ae~ 175 (511)
T 1dl2_A 98 FETTIRMLGGLLSAYHLSDVLEVGNKTVYLNKAIDLGDRLALAF-LSTQTGIPYSSINLHSG-QAVKNHADGGASSTAEF 175 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHGGG-GSSSSSCCCSEEETTTC-CEECCSSGGGCEEHHHH
T ss_pred hheehhhhhhhhhHHHhcccccCCCcHHHHHHHHHHHHHHHHhh-cCCCCCCCCceeecccC-CCCCCCCCCcccccccc
Confidence 344556788999999999 99999999999999999888 5 55653222100 000 00000000001111122
Q ss_pred HHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHH
Q 005023 563 SVSVINLVRLASIVAGSKSDYYRQNAEHSLAVFETR 598 (718)
Q Consensus 563 s~~a~~LlrL~~lt~~~~~~~y~e~a~~~l~~~~~~ 598 (718)
+.+...+.+|+++||+ +.|.+.|+++++.+...
T Consensus 176 gSl~LEF~~LS~LTGd---~~Y~~~a~r~~~~l~~~ 208 (511)
T 1dl2_A 176 TTLQMEFKYLAYLTGN---RTYWELVERVYEPLYKN 208 (511)
T ss_dssp SSCHHHHHHHHHHHTC---HHHHHHHHTTHHHHHHH
T ss_pred cceeeeHHHHHHHHCC---hHHHHHHHHHHHHHHhc
Confidence 2344569999999996 89999999999887654
No 250
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=93.84 E-value=0.44 Score=53.48 Aligned_cols=175 Identities=10% Similarity=-0.015 Sum_probs=103.7
Q ss_pred chHHHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEE--eecCCCCCCC---CC
Q 005023 416 SWNGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQH--SFRNGPSKAP---GF 490 (718)
Q Consensus 416 ~WNgl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~--~~~~g~~~~~---~~ 490 (718)
--|-+++-+|.-|+.+.++.......+ +...+.+|+.|+++++.|.-.|-.| +|.=+. .++.|.+... ..
T Consensus 100 ETtIR~LGGLLSAy~Ls~~~~~~~~~~----~~~~~~lL~kA~dLadrLlpAFdTp-tgiP~~~vnl~~~~~~~~~~~~~ 174 (503)
T 1hcu_A 100 ETNIRYLGGLLSAYDLLRGPFSSLATN----QTLVNSLLRQAQTLANGLKVAFTTP-SGVPDPTVFFNPTVRRSGASSNN 174 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTGGGCCC----HHHHHHHHHHHHHHHHHHGGGGCSS-SSCCCSEEECSSSCEECCCSEEE
T ss_pred eeehhhHhHHHHHHHHccCcccccccc----ccchHHHHHHHHHHHHHHHHhhcCC-CCCCcceeecccCCCCCCCCccc
Confidence 347889999999999998720000000 0001379999999999999887544 452111 1333322111 12
Q ss_pred cccHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcc--cccCCcc---ccCCCCCCccccccccCCCCCCCChHHHH
Q 005023 491 LDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFL--DREGGGY---FNTTGEDPSVLLRVKEDHDGAEPSGNSVS 565 (718)
Q Consensus 491 l~DyA~li~all~LYeaTgd~~~L~~A~~L~~~~~~~F~--D~~~Gg~---f~t~~~~~~l~~r~k~~~D~a~PS~ns~~ 565 (718)
+-..+-++.=+..|.++|||++|.+.|.++.+.+.+.-. .+..|-+ .+.... ... . .+...=++.-..
T Consensus 175 ~Ae~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~~l~~~~~~~~~~~GL~p~~i~~~tg--~~~----~-~~~~~Ga~~DS~ 247 (503)
T 1hcu_A 175 VAEIGSLVLEWTRLSDLTGNPQYAQLAQKGESYLLNPKGSPEAWPGLIGTFVSTSNG--TFQ----D-SSGSWSGLMDSF 247 (503)
T ss_dssp HHHHTTSHHHHHHHHHHHSCTHHHHHHHHHHHHHHSCCBSCCSBTTBCCSEEETTTC--CBC----C-CEECSSTTTHHH
T ss_pred cccccceeeehHHHHHHhCChHHHHHHHHHHHHHHhhhcccCCCCCceeeEEeCCCC--ccc----C-CeeeecCCCccH
Confidence 333445567788899999999999999999988865321 0112221 111110 000 0 000111122247
Q ss_pred HHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHhhh
Q 005023 566 VINLVRLASIVAGSKSDYYRQNAEHSLAVFETRLKDMA 603 (718)
Q Consensus 566 a~~LlrL~~lt~~~~~~~y~e~a~~~l~~~~~~i~~~p 603 (718)
-.-|++.+.++|+. ++.|++.-++.+..+...+.+.|
T Consensus 248 YEYLlK~~il~g~~-~~~y~~m~~~a~~~i~~~l~~~~ 284 (503)
T 1hcu_A 248 YEYLIKMYLYDPVA-FAHYKDRWVLGADSTIGHLGSHP 284 (503)
T ss_dssp HHHHHHHHHHCTTT-THHHHHHHHHHHHHHHHHTEECB
T ss_pred HHHHHHHHHHcCCc-hHHHHHHHHHHHHHHHHHhccCC
Confidence 78899999999864 36788888888888777776655
No 251
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=93.81 E-value=0.78 Score=49.69 Aligned_cols=131 Identities=7% Similarity=-0.116 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHHhh-hhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEe--ec----------CCC
Q 005023 418 NGLVISSFARASKILK-SEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHS--FR----------NGP 484 (718)
Q Consensus 418 Ngl~I~ALa~A~~~~~-d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~--~~----------~g~ 484 (718)
-|.+ ..|+.++.... + +.+++.++++.+++.+...++.+|.++-. .+ ...
T Consensus 209 aGi~-~~L~~~~~~~~~~----------------~~~~~~~~~~~~~l~~~~~~~~~g~~wp~g~~~~~~~~~~~~~~~~ 271 (409)
T 2g0d_A 209 AGVG-CILAYAHIKGYSN----------------EASLSALQKIIFIYEKFELERKKQFLWKDGLVADELKKEKVIREAS 271 (409)
T ss_dssp HHHH-HHHHHHHHHTCCC----------------HHHHHHHHHHHHHHHHHCCCGGGTTCCCSEECHHHHHHTSCCSCCS
T ss_pred HHHH-HHHHHHHHhCCCC----------------hhHHHHHHHHHHHHHHHHhcCCCCCcCCCccccHhhhcccccccCC
Confidence 4545 78888876532 4 78999999999999877654334432211 11 111
Q ss_pred CCCCCCcccHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcccccCCccccCCCCCCccccccccCCCCCCCChHHH
Q 005023 485 SKAPGFLDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSV 564 (718)
Q Consensus 485 ~~~~~~l~DyA~li~all~LYeaTgd~~~L~~A~~L~~~~~~~F~D~~~Gg~f~t~~~~~~l~~r~k~~~D~a~PS~ns~ 564 (718)
....++...-+=.+.+++.+|++++|++|++.|++..+.+.+. ++... +...=-|.+=
T Consensus 272 ~~~~~WChG~~Gi~~~l~~~~~~~~d~~~~~~a~~~~~~~~~~------~~~~~----------------~~~LCHG~aG 329 (409)
T 2g0d_A 272 FIRDAWCYGGPGISLLYLYGGLALDNDYFVDKAEKILESAMQR------KLGID----------------SYMICHGYSG 329 (409)
T ss_dssp CCCCCSSSSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH------CTTCC----------------SCCTTTSHHH
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh------ccCCC----------------CCCCCChHHH
Confidence 2344666677778999999999999999999999999888765 11100 0112225555
Q ss_pred HHHHHHHHHHHhCCCCchHHHHHHHH
Q 005023 565 SVINLVRLASIVAGSKSDYYRQNAEH 590 (718)
Q Consensus 565 ~a~~LlrL~~lt~~~~~~~y~e~a~~ 590 (718)
.+..|+++++.|++ +.|.++|.+
T Consensus 330 ~~~~l~~l~~~~~~---~~~~~~a~~ 352 (409)
T 2g0d_A 330 LIEICSLFKRLLNT---KKFDSYMEE 352 (409)
T ss_dssp HHHHHHHHHHHHCC---CTTHHHHHH
T ss_pred HHHHHHHHHHHhCC---HHHHHHHHH
Confidence 67778999999986 678888876
No 252
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=93.78 E-value=0.079 Score=42.38 Aligned_cols=56 Identities=13% Similarity=0.087 Sum_probs=35.0
Q ss_pred EEEcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCcee
Q 005023 17 FLINTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPL 89 (718)
Q Consensus 17 i~y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p~ 89 (718)
++.+||++|+.+.. . .+.++-.|.. +|.++.|+..+.+ + .+|..+.|+.++ +|+.+
T Consensus 6 y~~~~C~~C~~~~~-~------l~~~~i~~~~--~di~~~~~~~~~~----~-~~~~~~vP~l~~---~g~~~ 61 (75)
T 1r7h_A 6 YTKPACVQCTATKK-A------LDRAGLAYNT--VDISLDDEARDYV----M-ALGYVQAPVVEV---DGEHW 61 (75)
T ss_dssp EECTTCHHHHHHHH-H------HHHTTCCCEE--EETTTCHHHHHHH----H-HTTCBCCCEEEE---TTEEE
T ss_pred EeCCCChHHHHHHH-H------HHHcCCCcEE--EECCCCHHHHHHH----H-HcCCCccCEEEE---CCeEE
Confidence 45689999998763 2 2223434544 5555666554433 1 278899999874 77765
No 253
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=93.77 E-value=0.19 Score=47.76 Aligned_cols=81 Identities=10% Similarity=0.179 Sum_probs=44.1
Q ss_pred hhhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhh-cccEEEEecCCC----CcchHHHHHHHHHH----------
Q 005023 8 GGTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLN-DWFVSIKVDREE----RPDVDKVYMTYVQA---------- 69 (718)
Q Consensus 8 ~Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln-~~Fv~vkvD~ee----~pd~d~~y~~~~q~---------- 69 (718)
.+.-.+|++++ ++||..|..+... + .++.+.+. +.+..|-|..+. .++-.+...++++.
T Consensus 33 l~~~~Gk~vlv~F~atwC~~C~~~~p~-l--~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 109 (180)
T 3kij_A 33 LEKYKGKVSLVVNVASDCQLTDRNYLG-L--KELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFH 109 (180)
T ss_dssp GGGGTTSEEEEEEECSSSTTHHHHHHH-H--HHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBC
T ss_pred HHHcCCCEEEEEEEecCCCCcHHHHHH-H--HHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCceee
Confidence 34446888866 4899999886532 1 23333333 346666664332 11211222222222
Q ss_pred ---hcC-------------CCCCCc----EEEeCCCCceeec
Q 005023 70 ---LYG-------------GGGWPL----SVFLSPDLKPLMG 91 (718)
Q Consensus 70 ---~~g-------------~~GwP~----~vfl~p~g~p~~~ 91 (718)
..| .++.|+ +++++++|+.+..
T Consensus 110 ~~d~~~~~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~ 151 (180)
T 3kij_A 110 KIKILGSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKF 151 (180)
T ss_dssp CCCCSSTTCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEE
T ss_pred eeeccCccccHHHHHHHhcCCCCccccceEEEECCCCCEEEE
Confidence 011 246898 9999999999854
No 254
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=93.61 E-value=0.05 Score=54.14 Aligned_cols=22 Identities=14% Similarity=-0.040 Sum_probs=18.7
Q ss_pred cCCC------CCCcEEEeCCCCceeecc
Q 005023 71 YGGG------GWPLSVFLSPDLKPLMGG 92 (718)
Q Consensus 71 ~g~~------GwP~~vfl~p~g~p~~~~ 92 (718)
+|.. ++|+++|++++|+..+..
T Consensus 136 ygv~~~~~g~~~P~~~liD~~G~I~~~~ 163 (220)
T 1zye_A 136 YGVLLEGPGLALRGLFIIDPNGVIKHLS 163 (220)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred hCCeecCCCcccceEEEECCCCEEEEEE
Confidence 5666 899999999999998754
No 255
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=93.54 E-value=0.22 Score=47.96 Aligned_cols=37 Identities=8% Similarity=-0.002 Sum_probs=24.0
Q ss_pred cCCCCCCcEEEeCCCCceeecccccCCCCCCCc-ccHHHHHHHHHH
Q 005023 71 YGGGGWPLSVFLSPDLKPLMGGTYFPPEDKYGR-PGFKTILRKVKD 115 (718)
Q Consensus 71 ~g~~GwP~~vfl~p~g~p~~~~~y~p~~~~~~~-~~f~~~L~~i~~ 115 (718)
.|+.|+|+.|| +|+.+.++.- +. +. ..|.++|+.+.+
T Consensus 147 ~gv~gtPt~vi---ng~~~~~g~~-~~----~~~e~~~~~i~~L~~ 184 (195)
T 3hd5_A 147 AHIDGTPAFAV---GGRYMTSPVL-AG----NDYAGALKVVDQLIV 184 (195)
T ss_dssp TTCCSSSEEEE---TTTEEECTTT-TT----GGGTTHHHHHHHHHH
T ss_pred hCCCcCceEEE---CCEEEeCccc-cC----ChHHHHHHHHHHHHH
Confidence 47899999998 7888765432 22 11 257777776543
No 256
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=93.52 E-value=0.08 Score=44.56 Aligned_cols=62 Identities=24% Similarity=0.266 Sum_probs=38.0
Q ss_pred EEEcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCcee
Q 005023 17 FLINTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPL 89 (718)
Q Consensus 17 i~y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p~ 89 (718)
++.+||++|+.+.. +.+.++-.|..|.||..+..+-.+. .......+|..+.|+.++ +|+.+
T Consensus 17 y~~~~Cp~C~~~~~-------~L~~~gi~~~~~~v~~~~~~~~~~~-~~~l~~~~g~~~vP~l~~---~g~~i 78 (92)
T 3ic4_A 17 YGLSTCPHCKRTLE-------FLKREGVDFEVIWIDKLEGEERKKV-IEKVHSISGSYSVPVVVK---GDKHV 78 (92)
T ss_dssp EECTTCHHHHHHHH-------HHHHHTCCCEEEEGGGCCHHHHHHH-HHHHHHHHSSSCSCEEEE---TTEEE
T ss_pred EECCCChHHHHHHH-------HHHHcCCCcEEEEeeeCCccchHHH-HHHHHHhcCCCCcCEEEE---CCEEE
Confidence 44589999999762 3344566788777775322111111 122223478889999877 77766
No 257
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=93.51 E-value=0.1 Score=45.84 Aligned_cols=70 Identities=9% Similarity=0.093 Sum_probs=40.2
Q ss_pred hHHhhhhhcCCcEE-EE-----cCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCC
Q 005023 4 RSFCGGTKTRRTHF-LI-----NTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWP 77 (718)
Q Consensus 4 ~a~~~Ak~e~K~ii-~y-----~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP 77 (718)
+.++...++++.+| .. +||++|+.+.+ .| +-++-.|..| |.++.|++...+ ..++|..++|
T Consensus 6 ~~~~~~i~~~~vvvy~~g~~~~~~Cp~C~~ak~-~L------~~~~i~~~~v--di~~~~~~~~~l----~~~~g~~~vP 72 (109)
T 1wik_A 6 SGLKVLTNKASVMLFMKGNKQEAKCGFSKQILE-IL------NSTGVEYETF--DILEDEEVRQGL----KTFSNWPTYP 72 (109)
T ss_dssp CCHHHHHTTSSEEEEESSTTTCCCSSTHHHHHH-HH------HHTCSCEEEE--ESSSCHHHHHHH----HHHHSCCSSC
T ss_pred HHHHHHhccCCEEEEEecCCCCCCCchHHHHHH-HH------HHcCCCeEEE--ECCCCHHHHHHH----HHHhCCCCCC
Confidence 34556666666443 34 79999998652 22 2334345544 555555544433 3347888899
Q ss_pred cEEEeCCCCcee
Q 005023 78 LSVFLSPDLKPL 89 (718)
Q Consensus 78 ~~vfl~p~g~p~ 89 (718)
. ||+ +|+.+
T Consensus 73 ~-ifi--~g~~i 81 (109)
T 1wik_A 73 Q-LYV--RGDLV 81 (109)
T ss_dssp E-EEC--SSSEE
T ss_pred E-EEE--CCEEE
Confidence 7 454 56665
No 258
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=93.50 E-value=0.18 Score=47.58 Aligned_cols=37 Identities=16% Similarity=0.233 Sum_probs=25.0
Q ss_pred CCcEEEeCCCCceeecc-cccCCCCCCCcccHHHHHHHHHHH
Q 005023 76 WPLSVFLSPDLKPLMGG-TYFPPEDKYGRPGFKTILRKVKDA 116 (718)
Q Consensus 76 wP~~vfl~p~g~p~~~~-~y~p~~~~~~~~~f~~~L~~i~~~ 116 (718)
.|++++++++|+..+.. +..| .+.+++-++|+.+.++
T Consensus 121 ~p~tflID~~G~I~~~~~~~~~----~~~~~~~eil~~l~~l 158 (164)
T 4gqc_A 121 KRAVFIVKPDGTVAYKWVTDNP----LNEPDYDEVVREANKI 158 (164)
T ss_dssp CCEEEEECTTSBEEEEEECSCT----TCCCCHHHHHHHHHHH
T ss_pred eeEEEEECCCCEEEEEEEeCCC----CCCCCHHHHHHHHHHH
Confidence 68899999999988643 2222 2356777777766544
No 259
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=93.46 E-value=0.14 Score=47.93 Aligned_cols=19 Identities=21% Similarity=-0.020 Sum_probs=16.1
Q ss_pred CCCCCcEEEeCCCCceeec
Q 005023 73 GGGWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 73 ~~GwP~~vfl~p~g~p~~~ 91 (718)
..+.|++++++++|+....
T Consensus 133 ~~~~p~~~lid~~G~i~~~ 151 (174)
T 1xzo_A 133 VIHQSSFYLVGPDGKVLKD 151 (174)
T ss_dssp CCSCCEEEEECTTSEEEEE
T ss_pred eeeeeEEEEECCCCeEEEE
Confidence 4568999999999999863
No 260
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=93.42 E-value=7.2 Score=43.37 Aligned_cols=280 Identities=14% Similarity=0.111 Sum_probs=156.8
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHHcc-CC-----------hHHHHHHHHHHHHHHHhccCCCCceeeeccCCcccccC
Q 005023 241 RWHVPHFEKMLYDQGQLANVYLDAFSLT-KD-----------VFYSYICRDILDYLRRDMIGPGGEIFSAEDADSAETEG 308 (718)
Q Consensus 241 ~W~vPHFEKmLyDnA~ll~~ya~Ay~~t-~~-----------~~y~~~A~~~~~~l~~~m~~p~Ggf~sa~DADs~~~~~ 308 (718)
+-.|+-||--. ++|-.++-||.++ ++ +.+++.|.+..+-|+--+-.|.|-=|+..+-.+..
T Consensus 80 ~~~vsvFETtI----R~LGGLLSAy~Ls~g~~~~~~~~~~~~~~lL~kA~dLadrLlpAF~TptgiP~~~vnl~~~~--- 152 (475)
T 2ri9_A 80 SDTVSLFETTI----RYLAGMLSGYDLLQGPAKNLVDNQDLIDGLLDQSRNLADVLKFAFDTPSGVPYNNINITSHG--- 152 (475)
T ss_dssp SSCEEHHHHHH----HHHHHHHHHHHHHHTTTTTSCCCHHHHHHHHHHHHHHHHHHGGGGCSSSSCCCSEECTTTCC---
T ss_pred CCccchhheeh----HhHhHHhHHHHhccCccccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCCceeecccCC---
Confidence 34566688654 5788888888888 76 79999999999999987777776444433321100
Q ss_pred cccccCCceEeechHHHHHHhchhHHHHHHHhcccCCCCcCCCCCCCCCCccCCcceeeccCCchHHHHhcCCCHHHHHH
Q 005023 309 ATRKKEGAFYVWTSKEVEDILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLEKYLN 388 (718)
Q Consensus 309 ~~~~~EG~yY~Wt~~Ei~~~L~~~~~~~~~~~~v~~~Gn~~~~~~~dp~~~~eg~nvL~~~~~~~~~a~~~g~~~~~~~~ 388 (718)
....+ -+ ...|+-.+. =+ |. .++...|- ....+
T Consensus 153 --~~~~~--~~-~~Ae~gsl~-LE---F~------------------------------------~LS~lTGd--~~Y~~ 185 (475)
T 2ri9_A 153 --NDGAT--TN-GLAVTGTLV-LE---WT------------------------------------RLSDLTGD--EEYAK 185 (475)
T ss_dssp --BCCCS--EE-EHHHHHSCH-HH---HH------------------------------------HHHHHHSC--THHHH
T ss_pred --CcCCC--cc-chhccccce-ee---HH------------------------------------HHHHHhCC--HHHHH
Confidence 00000 00 001110000 00 00 11222221 23445
Q ss_pred HHHHHHHHHHhhh--ccCCCC-----CCCch------hhhchHHHHH---HHHHHHHHHhhhhhhhhcccCCCCCCChHH
Q 005023 389 ILGECRRKLFDVR--SKRPRP-----HLDDK------VIVSWNGLVI---SSFARASKILKSEAESAMFNFPVVGSDRKE 452 (718)
Q Consensus 389 ~l~~~r~~L~~~R--~~R~~P-----~~Ddk------ilt~WNgl~I---~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~ 452 (718)
..+.+.+.|.+.| .....| ++|-. -..+|.|..- .=|.+.+..+++. .+.
T Consensus 186 ~a~~~~~~l~~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYLlK~~il~g~~--------------~~~ 251 (475)
T 2ri9_A 186 LSQKAESYLLKPQPSSSEPFPGLVGSSININDGQFADSRVSWNGGDDSFYEYLIKMYVYDPKR--------------FET 251 (475)
T ss_dssp HHHHHHHHHHSCSSGGGCSBTTBCCSEEETTTCCBCCCCBCSSTTTHHHHHHHHHHHHHCTTT--------------THH
T ss_pred HHHHHHHHHHhhccccccCCCCCcceEEeCCCCcccCCceeecCCcchHHHHHHHHHHHcCCc--------------hHH
Confidence 5667777777655 211112 11110 1234444433 3577788888762 257
Q ss_pred HHHHHHHHHHHHHHhccccC---CCeEE-EeecCCCCCCCCCcccHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHHHh
Q 005023 453 YMEVAESAASFIRRHLYDEQ---THRLQ-HSFRNGPSKAPGFLDDYAFLISGLLDLYE-FGSGTKWLVWAIELQNTQDEL 527 (718)
Q Consensus 453 ~l~~A~~~~~~l~~~~~d~~---~g~l~-~~~~~g~~~~~~~l~DyA~li~all~LYe-aTgd~~~L~~A~~L~~~~~~~ 527 (718)
|+++=.++++-+.+|+.... .+.++ ..+.++.. ....+--+.++-|++.|.- ...++++++.|.+|.+.+...
T Consensus 252 ~~~m~~~a~~~i~~~l~~~~~~~~~~~~v~~~~~~~~--~~~~~hL~cF~~G~~aLgg~~~~~~~~~~~a~~l~~tC~~~ 329 (475)
T 2ri9_A 252 YKDRWVLAAESTIKHLKSHPKSRPDLTFLSSYSNRNY--DLSSQHLTCFDGGSFLLGGTVLDRQDFIDFGLELVDGCEAT 329 (475)
T ss_dssp HHHHHHHHHHHHHHHTEECCSSCTTCCEECEEETTEE--ECEEETGGGGHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCCCCCCceEEEeccCCcc--ccccchHHHhHHHHHHhcccccccHHHHHHHHHHHHHHHHH
Confidence 88988899999999886421 12222 22333321 1122333455666666655 446788999999999998876
Q ss_pred cccccCCc----cccCCCCCC-----------------ccccccccCCCCCCCChHHHHHHHHHHHHHHhCCCCchHHHH
Q 005023 528 FLDREGGG----YFNTTGEDP-----------------SVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAGSKSDYYRQ 586 (718)
Q Consensus 528 F~D~~~Gg----~f~t~~~~~-----------------~l~~r~k~~~D~a~PS~ns~~a~~LlrL~~lt~~~~~~~y~e 586 (718)
+....+|- |........ .-++|| ..++.+.-|+++||+ +.|++
T Consensus 330 y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~g~~~~~~~y~LRP-------------E~iES~fylyR~TgD---~~yr~ 393 (475)
T 2ri9_A 330 YNSTLTKIGPDSWGWDPKKVPSDQKEFYEKAGFYISSGSYVLRP-------------EVIESFYYAHRVTGK---EIYRD 393 (475)
T ss_dssp HHTSSSSCCCSEEECCTTCCCGGGHHHHHHHSCEEEECCBCSCC-------------HHHHHHHHHHHHHCC---HHHHH
T ss_pred HHhcccCCCCcEEEeecCcccccccccccCCCceecccccCCCh-------------HHHHHHHHHHHHhCC---HHHHH
Confidence 65434442 222211110 011221 578899999999996 89999
Q ss_pred HHHHHHHHHHHHHHhhhhhHH
Q 005023 587 NAEHSLAVFETRLKDMAMAVP 607 (718)
Q Consensus 587 ~a~~~l~~~~~~i~~~p~~~~ 607 (718)
.+.++++++.... +.+.|++
T Consensus 394 ~gw~~f~ai~k~~-rt~~G~a 413 (475)
T 2ri9_A 394 WVWNAFVAINSTC-RTDSGFA 413 (475)
T ss_dssp HHHHHHHHHHHHT-BCSSSBC
T ss_pred HHHHHHHHHHHHH-ccccCCc
Confidence 9999999976543 4555543
No 261
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=93.22 E-value=0.042 Score=55.64 Aligned_cols=37 Identities=11% Similarity=0.067 Sum_probs=25.3
Q ss_pred cCCCCCCcEEEeCCCCceeecccccCCCCCCCcccHHHHHHHH
Q 005023 71 YGGGGWPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRKV 113 (718)
Q Consensus 71 ~g~~GwP~~vfl~p~g~p~~~~~y~p~~~~~~~~~f~~~L~~i 113 (718)
.|+.|+|+.+|.+.+|+.....+|.|++ .|.++|+.+
T Consensus 195 ~gv~gtPt~vi~~~~G~~~~~~G~~~~~------~L~~~l~~~ 231 (241)
T 1v58_A 195 LGANVTPAIYYMSKENTLQQAVGLPDQK------TLNIIMGNK 231 (241)
T ss_dssp HTCCSSCEEEEEETTTEEEEEESSCCHH------HHHHHTTC-
T ss_pred cCCCCCCEEEEECCCCCEEEecCCCCHH------HHHHHHHHH
Confidence 5899999999998889753234566654 455555544
No 262
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=93.20 E-value=0.65 Score=50.33 Aligned_cols=145 Identities=14% Similarity=0.015 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHHHhccccCCCeEEEeecCC------------CCCCCCCcccHHHHHHHHHHHHHHc-CChHHHHHH
Q 005023 451 KEYMEVAESAASFIRRHLYDEQTHRLQHSFRNG------------PSKAPGFLDDYAFLISGLLDLYEFG-SGTKWLVWA 517 (718)
Q Consensus 451 ~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~~g------------~~~~~~~l~DyA~li~all~LYeaT-gd~~~L~~A 517 (718)
+.+.+.++++.++|.+...+..+..-+....+. .....++....+=.+..|..+|..+ .++.+++.+
T Consensus 153 ~~~~~~~~~~~~~l~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aGi~~~L~~~~~~~~~~~~~~~~~ 232 (409)
T 2g0d_A 153 EQYDDLKILIINFLSNLTKENNGLISLYIKSENQMSQSESEMYPLGCLNMGLAHGLAGVGCILAYAHIKGYSNEASLSAL 232 (409)
T ss_dssp GGGHHHHHHHHHHHHHTTSCCSSSCTTCBCGGGSSSHHHHHHCTTCBEECCTTTSHHHHHHHHHHHHHHTCCCHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHhcCCCCCceeecCCccccchhhhcCCCCCccCCchhhHHHHHHHHHHHHHhCCCChhHHHHH
Confidence 456788888999888754311110000000000 0012366677777776666666554 289999999
Q ss_pred HHHHHHHHHhcccccCCccccC---CCCCCc-cccccccCCCCCCCChHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHH
Q 005023 518 IELQNTQDELFLDREGGGYFNT---TGEDPS-VLLRVKEDHDGAEPSGNSVSVINLVRLASIVAGSKSDYYRQNAEHSLA 593 (718)
Q Consensus 518 ~~L~~~~~~~F~D~~~Gg~f~t---~~~~~~-l~~r~k~~~D~a~PS~ns~~a~~LlrL~~lt~~~~~~~y~e~a~~~l~ 593 (718)
.++.+.+.+...+.++|.++-. ..+... -........-..--.|.+=.+..+++++..+++ +.|.+.|++.+.
T Consensus 233 ~~~~~~l~~~~~~~~~g~~wp~g~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~~d---~~~~~~a~~~~~ 309 (409)
T 2g0d_A 233 QKIIFIYEKFELERKKQFLWKDGLVADELKKEKVIREASFIRDAWCYGGPGISLLYLYGGLALDN---DYFVDKAEKILE 309 (409)
T ss_dssp HHHHHHHHHHCCCGGGTTCCCSEECHHHHHHTSCCSCCSCCCCCSSSSHHHHHHHHHHHHHHTTC---HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCcCCCccccHhhhcccccccCCCCCCcCCCCCHHHHHHHHHHHHHcCC---HHHHHHHHHHHH
Confidence 9999999777666556663321 000000 000000000112233555677788889999985 889999998888
Q ss_pred HHHHH
Q 005023 594 VFETR 598 (718)
Q Consensus 594 ~~~~~ 598 (718)
....+
T Consensus 310 ~~~~~ 314 (409)
T 2g0d_A 310 SAMQR 314 (409)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 77653
No 263
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=93.13 E-value=0.1 Score=49.87 Aligned_cols=17 Identities=12% Similarity=-0.140 Sum_probs=15.6
Q ss_pred CCCcEEEeCCCCceeec
Q 005023 75 GWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 75 GwP~~vfl~p~g~p~~~ 91 (718)
+.|++++++++|+..+.
T Consensus 118 ~~P~~~lid~~G~i~~~ 134 (187)
T 1we0_A 118 ADRGTFIIDPDGVIQAI 134 (187)
T ss_dssp ECEEEEEECTTSBEEEE
T ss_pred eeeEEEEECCCCeEEEE
Confidence 89999999999999864
No 264
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=93.10 E-value=0.092 Score=51.14 Aligned_cols=18 Identities=6% Similarity=-0.038 Sum_probs=16.1
Q ss_pred CCCcEEEeCCCCceeecc
Q 005023 75 GWPLSVFLSPDLKPLMGG 92 (718)
Q Consensus 75 GwP~~vfl~p~g~p~~~~ 92 (718)
++|++++++++|+..+..
T Consensus 126 ~~P~~~lid~~G~i~~~~ 143 (202)
T 1uul_A 126 AYRGLFIIDPKQNLRQIT 143 (202)
T ss_dssp ECEEEEEECTTSBEEEEE
T ss_pred eeeEEEEECCCCEEEEEE
Confidence 899999999999998753
No 265
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=93.06 E-value=0.032 Score=53.90 Aligned_cols=22 Identities=9% Similarity=-0.232 Sum_probs=18.4
Q ss_pred cCCC-----CCCcEEEeCCCCceeecc
Q 005023 71 YGGG-----GWPLSVFLSPDLKPLMGG 92 (718)
Q Consensus 71 ~g~~-----GwP~~vfl~p~g~p~~~~ 92 (718)
+|.. ++|++++++++|+..+..
T Consensus 111 ~gv~~~~g~~~P~~~liD~~G~i~~~~ 137 (192)
T 2h01_A 111 YDVLFNESVALRAFVLIDKQGVVQHLL 137 (192)
T ss_dssp TTCEETTTEECCEEEEECTTSBEEEEE
T ss_pred hCCcCcCCceeeEEEEEcCCCEEEEEE
Confidence 5665 799999999999998653
No 266
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=93.03 E-value=0.15 Score=49.03 Aligned_cols=37 Identities=22% Similarity=0.170 Sum_probs=24.4
Q ss_pred cCCCCCCcEEEeCCCCceeec-ccccCCCCCCCcccHHHHHHHHHHH
Q 005023 71 YGGGGWPLSVFLSPDLKPLMG-GTYFPPEDKYGRPGFKTILRKVKDA 116 (718)
Q Consensus 71 ~g~~GwP~~vfl~p~g~p~~~-~~y~p~~~~~~~~~f~~~L~~i~~~ 116 (718)
.|+.|+|+.+| +|+.+.. .++.|.+ .|.++|+.+.+.
T Consensus 148 ~gv~gtPt~~v---ng~~~~~~~G~~~~e------~l~~~i~~l~~k 185 (192)
T 3h93_A 148 YQVTGVPTMVV---NGKYRFDIGSAGGPE------ETLKLADYLIEK 185 (192)
T ss_dssp HTCCSSSEEEE---TTTEEEEHHHHTSHH------HHHHHHHHHHHH
T ss_pred hCCCCCCeEEE---CCEEEecccccCCHH------HHHHHHHHHHHH
Confidence 48899998877 7888753 2444543 566666655443
No 267
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=92.98 E-value=0.097 Score=43.85 Aligned_cols=54 Identities=9% Similarity=0.138 Sum_probs=31.8
Q ss_pred EEcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhc-CCCCCCcEEEeCCCCcee
Q 005023 18 LINTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALY-GGGGWPLSVFLSPDLKPL 89 (718)
Q Consensus 18 ~y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~-g~~GwP~~vfl~p~g~p~ 89 (718)
+.+||++|+.+.. . .+.++-.|..|.|| ++....+. ..+ |..+.|+.++ +|+.+
T Consensus 12 ~~~~C~~C~~~~~-~------L~~~~i~~~~vdv~----~~~~~~l~----~~~~~~~~vP~l~~---~g~~i 66 (89)
T 2klx_A 12 TRPNCPYCKRARD-L------LDKKGVKYTDIDAS----TSLRQEMV----QRANGRNTFPQIFI---GDYHV 66 (89)
T ss_dssp SCSCCTTTHHHHH-H------HHHHTCCEEEECSC----HHHHHHHH----HHHHSSCCSCEEEE---TTEEC
T ss_pred ECCCChhHHHHHH-H------HHHcCCCcEEEECC----HHHHHHHH----HHhCCCCCcCEEEE---CCEEE
Confidence 3589999998763 2 22334456655555 22222222 235 8899998753 67765
No 268
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=92.87 E-value=0.22 Score=46.10 Aligned_cols=17 Identities=6% Similarity=-0.093 Sum_probs=14.5
Q ss_pred CCCcEEEeCCCCceeec
Q 005023 75 GWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 75 GwP~~vfl~p~g~p~~~ 91 (718)
+.|++++++++|+++..
T Consensus 132 ~~P~~~lid~~G~i~~~ 148 (169)
T 2v1m_A 132 WNFSKFLVDRQGQPVKR 148 (169)
T ss_dssp STTCEEEECTTSCEEEE
T ss_pred ccceEEEECCCCCEEEE
Confidence 35899999999999864
No 269
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=92.76 E-value=3 Score=49.03 Aligned_cols=83 Identities=14% Similarity=0.057 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHhCCCccc----------CC-CcEEEEecCCCCCCCCCcchHHHHHHHHHHHHHHHHcc---CChHH
Q 005023 208 EGQKMVLFTLQCMAKGGIHDH----------VG-GGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLT---KDVFY 273 (718)
Q Consensus 208 ~~~~~~~~TL~~m~~gGi~D~----------v~-GGF~RYsvD~~W~vPHFEKmLyDnA~ll~~ya~Ay~~t---~~~~y 273 (718)
+..+++.+.++-|...=+.|. .. |||. |+.... .---.-+.|..+.++..+.... +++.+
T Consensus 406 ~~~~~l~ka~~~L~~~Q~~~~~~d~~~~~r~~~~GGW~-f~~~~~-----~~pd~d~TA~vl~aL~~~~~~~~~~g~~~~ 479 (732)
T 1w6k_A 406 EFSSCLQKAHEFLRLSQVPDNPPDYQKYYRQMRKGGFS-FSTLDC-----GWIVSDCTAEALKAVLLLQEKCPHVTEHIP 479 (732)
T ss_dssp GGHHHHHHHHHHHHHHSCCCCCTTGGGGTCCCCTTCCB-SSCTTT-----CCBCHHHHHHHHHHHHHHHHHCTTCCSCCC
T ss_pred hhHHHHHHHHHHHHHhcccccCCcccccccCCCCCeec-CCCCCC-----CCCccccHHHHHHHHHHHhcccccccchhh
Confidence 445566666666655333332 11 7774 565432 2234667899999999988764 45677
Q ss_pred HHHHHHHHHHHHHhccCCCCceee
Q 005023 274 SYICRDILDYLRRDMIGPGGEIFS 297 (718)
Q Consensus 274 ~~~A~~~~~~l~~~m~~p~Ggf~s 297 (718)
.+.++++++||++ ++.++|||.+
T Consensus 480 ~~~i~~av~wLls-~Q~~DGgw~a 502 (732)
T 1w6k_A 480 RERLCDAVAVLLN-MRNPDGGFAT 502 (732)
T ss_dssp HHHHHHHHHHHHT-TCCTTSCBCS
T ss_pred HHHHHHHHHHHHH-hcCCCCCEEe
Confidence 8899999999997 8899999953
No 270
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=92.58 E-value=0.18 Score=42.37 Aligned_cols=57 Identities=14% Similarity=0.291 Sum_probs=33.6
Q ss_pred EEEcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCcee
Q 005023 17 FLINTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPL 89 (718)
Q Consensus 17 i~y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p~ 89 (718)
++.+||+.|+.+.. . .+..+-.|..|.|| +.|.....+. ..+|..+.|+ +|. +|+.+
T Consensus 11 y~~~~C~~C~~~~~-~------L~~~~i~~~~~di~--~~~~~~~~l~----~~~~~~~vP~-l~~--~g~~i 67 (92)
T 2khp_A 11 YTRPGCPYCARAKA-L------LARKGAEFNEIDAS--ATPELRAEMQ----ERSGRNTFPQ-IFI--GSVHV 67 (92)
T ss_dssp EECTTCHHHHHHHH-H------HHHTTCCCEEEEST--TSHHHHHHHH----HHHTSSCCCE-EEE--TTEEE
T ss_pred EECCCChhHHHHHH-H------HHHcCCCcEEEECC--CCHHHHHHHH----HHhCCCCcCE-EEE--CCEEE
Confidence 44689999998753 2 22234456665555 4444333322 2468899995 454 66665
No 271
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=92.48 E-value=0.11 Score=50.28 Aligned_cols=22 Identities=9% Similarity=0.013 Sum_probs=18.6
Q ss_pred cCCC-----CCCcEEEeCCCCceeecc
Q 005023 71 YGGG-----GWPLSVFLSPDLKPLMGG 92 (718)
Q Consensus 71 ~g~~-----GwP~~vfl~p~g~p~~~~ 92 (718)
+|.. +.|++++++++|+.....
T Consensus 113 ~~v~~~~g~~~P~~~lid~~G~i~~~~ 139 (198)
T 1zof_A 113 YDVLFEEAIALRGAFLIDKNMKVRHAV 139 (198)
T ss_dssp TTCEETTTEECEEEEEEETTTEEEEEE
T ss_pred hCCcccCCcccceEEEECCCCEEEEEE
Confidence 5666 899999999999998643
No 272
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=92.25 E-value=0.19 Score=48.52 Aligned_cols=35 Identities=11% Similarity=-0.010 Sum_probs=22.9
Q ss_pred CCCcEEEeCCCCceeecc-cccCCCCCCCcccHHHHHHHHH
Q 005023 75 GWPLSVFLSPDLKPLMGG-TYFPPEDKYGRPGFKTILRKVK 114 (718)
Q Consensus 75 GwP~~vfl~p~g~p~~~~-~y~p~~~~~~~~~f~~~L~~i~ 114 (718)
++|++++++++|+..+.. +..+.. +.+.++++.|.
T Consensus 124 ~~P~~~lid~~G~i~~~~~g~~~~~-----~~~~e~l~~l~ 159 (197)
T 1qmv_A 124 AYRGLFIIDGKGVLRQITVNDLPVG-----RSVDEALRLVQ 159 (197)
T ss_dssp ECEEEEEECTTSBEEEEEEECTTBC-----CCHHHHHHHHH
T ss_pred eeeEEEEECCCCcEEEEEeCCCCCC-----CCHHHHHHHHH
Confidence 799999999999998653 223322 14555555543
No 273
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=92.21 E-value=0.32 Score=42.82 Aligned_cols=70 Identities=10% Similarity=0.155 Sum_probs=41.0
Q ss_pred hHHhhhhhcCCcEEEE-c-----CCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCC
Q 005023 4 RSFCGGTKTRRTHFLI-N-----TCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWP 77 (718)
Q Consensus 4 ~a~~~Ak~e~K~ii~y-~-----~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP 77 (718)
+.++...++++.+|-. + +|++|+...+ .| +-.+-.|..|.|+ +.|++.+. +..++|....|
T Consensus 9 ~~v~~~i~~~~Vvvy~k~t~~~p~Cp~C~~ak~-~L------~~~gi~~~~~dI~--~~~~~~~~----l~~~~g~~tvP 75 (109)
T 3ipz_A 9 DTLEKLVNSEKVVLFMKGTRDFPMCGFSNTVVQ-IL------KNLNVPFEDVNIL--ENEMLRQG----LKEYSNWPTFP 75 (109)
T ss_dssp HHHHHHHTSSSEEEEESBCSSSBSSHHHHHHHH-HH------HHTTCCCEEEEGG--GCHHHHHH----HHHHHTCSSSC
T ss_pred HHHHHHHccCCEEEEEecCCCCCCChhHHHHHH-HH------HHcCCCcEEEECC--CCHHHHHH----HHHHHCCCCCC
Confidence 4566677777655432 3 8999998652 22 2234446665554 44554433 33457888999
Q ss_pred cEEEeCCCCcee
Q 005023 78 LSVFLSPDLKPL 89 (718)
Q Consensus 78 ~~vfl~p~g~p~ 89 (718)
.. |+ +|+.+
T Consensus 76 ~i-fi--~g~~i 84 (109)
T 3ipz_A 76 QL-YI--GGEFF 84 (109)
T ss_dssp EE-EE--TTEEE
T ss_pred eE-EE--CCEEE
Confidence 54 55 56665
No 274
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=92.10 E-value=0.14 Score=50.73 Aligned_cols=22 Identities=9% Similarity=-0.242 Sum_probs=18.4
Q ss_pred cCCC-----CCCcEEEeCCCCceeecc
Q 005023 71 YGGG-----GWPLSVFLSPDLKPLMGG 92 (718)
Q Consensus 71 ~g~~-----GwP~~vfl~p~g~p~~~~ 92 (718)
+|.. ++|.+++++++|+..+..
T Consensus 132 ygv~~~~g~~~p~~~lID~~G~i~~~~ 158 (213)
T 2i81_A 132 YNVLFDDSVSLRAFVLIDMNGIVQHLL 158 (213)
T ss_dssp TTCEETTTEECEEEEEECTTSBEEEEE
T ss_pred hCCccccCCcccEEEEECCCCEEEEEE
Confidence 5665 799999999999998754
No 275
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=91.58 E-value=0.45 Score=47.98 Aligned_cols=60 Identities=13% Similarity=0.005 Sum_probs=41.3
Q ss_pred cCCcEEE---EcC--CchhhhhhccccCcHHHHHHhhc---c--cEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEE
Q 005023 12 TRRTHFL---INT--CHWCHVMEVESFEDEGVAKLLND---W--FVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVF 81 (718)
Q Consensus 12 e~K~ii~---y~~--C~wChvM~~esf~d~~va~~ln~---~--Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vf 81 (718)
-.+||++ ..| |.+|+.|.. . =+++|+..++ . ...++||.++.+++.+. +|+.++|+.+|
T Consensus 24 ~~~pv~v~~~~~~~~c~~c~~~~~-~--l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~--------~gv~~~Pt~~i 92 (243)
T 2hls_A 24 MVNPVEVHVFLSKSGCETCEDTLR-L--MKLFEEESPTRNGGKLLKLNVYYRESDSDKFSE--------FKVERVPTVAF 92 (243)
T ss_dssp CCSCEEEEEEECSSSCTTHHHHHH-H--HHHHHHHSCEETTEESEEEEEEETTTTHHHHHH--------TTCCSSSEEEE
T ss_pred CCCCEEEEEEeCCCCCCchHHHHH-H--HHHHHHhccCCCCCceeEEEEecCCcCHHHHHh--------cCCCcCCEEEE
Confidence 3566643 478 999999963 2 2455654322 1 44468899998877665 68889999999
Q ss_pred e
Q 005023 82 L 82 (718)
Q Consensus 82 l 82 (718)
+
T Consensus 93 ~ 93 (243)
T 2hls_A 93 L 93 (243)
T ss_dssp T
T ss_pred E
Confidence 8
No 276
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=91.54 E-value=0.08 Score=49.02 Aligned_cols=71 Identities=8% Similarity=0.173 Sum_probs=40.2
Q ss_pred hhHHhhhhhcCCcEE-EE-----cCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCC
Q 005023 3 RRSFCGGTKTRRTHF-LI-----NTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGW 76 (718)
Q Consensus 3 ~~a~~~Ak~e~K~ii-~y-----~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~Gw 76 (718)
.+.++...+.++.+| .+ .||++|+... ..|+. ++-.|..|-|+ +.|++.+. ++.++|...+
T Consensus 25 ~~~v~~~i~~~~Vvvy~ks~~~~~~Cp~C~~ak-~~L~~------~gv~y~~vdI~--~d~~~~~~----L~~~~G~~tv 91 (135)
T 2wci_A 25 IEKIQRQIAENPILLYMKGSPKLPSCGFSAQAV-QALAA------CGERFAYVDIL--QNPDIRAE----LPKYANWPTF 91 (135)
T ss_dssp HHHHHHHHHHCSEEEEESBCSSSBSSHHHHHHH-HHHHT------TCSCCEEEEGG--GCHHHHHH----HHHHHTCCSS
T ss_pred HHHHHHHhccCCEEEEEEecCCCCCCccHHHHH-HHHHH------cCCceEEEECC--CCHHHHHH----HHHHHCCCCc
Confidence 345666666676543 34 5899999755 22222 22336555444 44554433 3345788888
Q ss_pred CcEEEeCCCCcee
Q 005023 77 PLSVFLSPDLKPL 89 (718)
Q Consensus 77 P~~vfl~p~g~p~ 89 (718)
|.. |+ +|+.+
T Consensus 92 P~V-fI--~G~~i 101 (135)
T 2wci_A 92 PQL-WV--DGELV 101 (135)
T ss_dssp CEE-EE--TTEEE
T ss_pred CEE-EE--CCEEE
Confidence 875 44 56665
No 277
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=91.31 E-value=0.21 Score=49.54 Aligned_cols=18 Identities=6% Similarity=-0.121 Sum_probs=15.9
Q ss_pred CCCcEEEeCCCCceeecc
Q 005023 75 GWPLSVFLSPDLKPLMGG 92 (718)
Q Consensus 75 GwP~~vfl~p~g~p~~~~ 92 (718)
+.|++++++++|+..+..
T Consensus 159 ~~P~~~lID~~G~I~~~~ 176 (222)
T 3ztl_A 159 AFRGLFIIDPNGILRQIT 176 (222)
T ss_dssp BCEEEEEECTTSEEEEEE
T ss_pred ccceEEEECCCCeEEEEE
Confidence 789999999999998753
No 278
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A*
Probab=91.24 E-value=0.47 Score=54.68 Aligned_cols=85 Identities=13% Similarity=0.074 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEeecC--C--CC--CCCCCcc
Q 005023 419 GLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRN--G--PS--KAPGFLD 492 (718)
Q Consensus 419 gl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~~--g--~~--~~~~~l~ 492 (718)
+-+.+|||.|++++++- ...| ..++|+.|+++++|..++-- .+.....+ + .. ...++.
T Consensus 291 ~~~AAalAaas~vfk~~--d~~y--------a~~~L~~A~~~~~fa~~~~~-----~y~~~~~~~~~~~~~~Y~ss~~~- 354 (609)
T 1ut9_A 291 LNFAATLAQSARLWKDY--DPTF--------AADCLEKAEIAWQAALKHPD-----IYAEYTPGSGGPGGGPYNDDYVG- 354 (609)
T ss_dssp HHHHHHHHHHHHHHTTT--CHHH--------HHHHHHHHHHHHHHHHHCTT-----CCBCCCCSSSSCBSCCCCBSCCH-
T ss_pred HHHHHHHHHHHHhcccC--CHHH--------HHHHHHHHHHHHHHHHhCcc-----cccccccccCccCCCCCCCCCcc-
Confidence 55688899999999751 0111 15789999999999987631 11000000 0 00 112333
Q ss_pred cHHHHHHHHHHHHHHcCChHHHHHHHHHH
Q 005023 493 DYAFLISGLLDLYEFGSGTKWLVWAIELQ 521 (718)
Q Consensus 493 DyA~li~all~LYeaTgd~~~L~~A~~L~ 521 (718)
-.+++|.++||.+|||..||+.|++..
T Consensus 355 --DEl~WAAawLy~ATgd~~Yl~~a~~~~ 381 (609)
T 1ut9_A 355 --DEFYWAACELYVTTGKDEYKNYLMNSP 381 (609)
T ss_dssp --HHHHHHHHHHHHHHCCHHHHHHHHTST
T ss_pred --cHHHHHHHHHHHHhCCHHHHHHHHHhh
Confidence 345899999999999999999998743
No 279
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=91.24 E-value=0.11 Score=49.62 Aligned_cols=43 Identities=7% Similarity=0.132 Sum_probs=24.5
Q ss_pred hhhcCCcEEE---EcCCchhhhhhccccCcHHHHHHhh-cccEEEEecCC
Q 005023 9 GTKTRRTHFL---INTCHWCHVMEVESFEDEGVAKLLN-DWFVSIKVDRE 54 (718)
Q Consensus 9 Ak~e~K~ii~---y~~C~wChvM~~esf~d~~va~~ln-~~Fv~vkvD~e 54 (718)
+.-.+|++++ ++||..|..+... | .++.+.+. +.+..|.|+.+
T Consensus 45 ~~~~Gk~vlv~F~atwC~~C~~~~p~-l--~~l~~~~~~~~v~vv~vs~d 91 (181)
T 2p31_A 45 EKYRGSVSLVVNVASECGFTDQHYRA-L--QQLQRDLGPHHFNVLAFPCN 91 (181)
T ss_dssp GGGTTSEEEEEEECSSSTTHHHHHHH-H--HHHHHHHGGGTEEEEEEECC
T ss_pred HHcCCCEEEEEEeccCCCCcHHHHHH-H--HHHHHHhhcCCEEEEEEECc
Confidence 3345788765 5899999875432 2 23333333 33666666544
No 280
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=91.23 E-value=0.42 Score=44.46 Aligned_cols=36 Identities=11% Similarity=0.080 Sum_probs=22.5
Q ss_pred CCcEEEeCCCCceeeccc-ccCCCCCCCcccHHHHHHHHHH
Q 005023 76 WPLSVFLSPDLKPLMGGT-YFPPEDKYGRPGFKTILRKVKD 115 (718)
Q Consensus 76 wP~~vfl~p~g~p~~~~~-y~p~~~~~~~~~f~~~L~~i~~ 115 (718)
.|++++++++|+..+... .-+. ..+.+.++++.|.+
T Consensus 128 ~p~~~lid~~G~i~~~~~g~~~~----~~~~~~~l~~~l~~ 164 (167)
T 2jsy_A 128 ARSVFVLDENGKVVYAEYVSEAT----NHPNYEKPIEAAKA 164 (167)
T ss_dssp CCEEEEECTTSCEEEEEECSBTT----SCCCSHHHHHHHHH
T ss_pred eeEEEEEcCCCcEEEEEecCCcC----CCCCHHHHHHHHHH
Confidence 499999999999986432 1111 12345566665544
No 281
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=91.10 E-value=0.28 Score=44.15 Aligned_cols=71 Identities=8% Similarity=0.109 Sum_probs=41.5
Q ss_pred hhHHhhhhhcCCcEEE-Ec-----CCchhhhhhccccCcHHHHHHhhc-ccEEEEecCCCCcchHHHHHHHHHHhcCCCC
Q 005023 3 RRSFCGGTKTRRTHFL-IN-----TCHWCHVMEVESFEDEGVAKLLND-WFVSIKVDREERPDVDKVYMTYVQALYGGGG 75 (718)
Q Consensus 3 ~~a~~~Ak~e~K~ii~-y~-----~C~wChvM~~esf~d~~va~~ln~-~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~G 75 (718)
++.+++..++++.+|- .+ ||++|+...+ .|+ -++- .|..|.|| +.|++-+. ++.++|...
T Consensus 10 ~~~v~~~i~~~~Vvvfsk~t~~~p~Cp~C~~ak~-lL~------~~gv~~~~~vdV~--~d~~~~~~----l~~~tg~~t 76 (118)
T 2wem_A 10 AEQLDALVKKDKVVVFLKGTPEQPQCGFSNAVVQ-ILR------LHGVRDYAAYNVL--DDPELRQG----IKDYSNWPT 76 (118)
T ss_dssp HHHHHHHHHHSSEEEEESBCSSSBSSHHHHHHHH-HHH------HTTCCCCEEEESS--SCHHHHHH----HHHHHTCCS
T ss_pred HHHHHHHhccCCEEEEEecCCCCCccHHHHHHHH-HHH------HcCCCCCEEEEcC--CCHHHHHH----HHHHhCCCC
Confidence 3556777777776543 33 8999998552 222 2232 35555554 44544333 344578888
Q ss_pred CCcEEEeCCCCcee
Q 005023 76 WPLSVFLSPDLKPL 89 (718)
Q Consensus 76 wP~~vfl~p~g~p~ 89 (718)
+|..++ +|+.+
T Consensus 77 vP~vfI---~g~~I 87 (118)
T 2wem_A 77 IPQVYL---NGEFV 87 (118)
T ss_dssp SCEEEE---TTEEE
T ss_pred cCeEEE---CCEEE
Confidence 898644 56666
No 282
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=91.08 E-value=0.68 Score=42.69 Aligned_cols=17 Identities=18% Similarity=0.108 Sum_probs=15.0
Q ss_pred CCcEEEeCCCCceeecc
Q 005023 76 WPLSVFLSPDLKPLMGG 92 (718)
Q Consensus 76 wP~~vfl~p~g~p~~~~ 92 (718)
.|++++++++|+..+..
T Consensus 125 ~p~~~lid~~G~i~~~~ 141 (163)
T 3gkn_A 125 ERSTFLLSPEGQVVQAW 141 (163)
T ss_dssp CCEEEEECTTSCEEEEE
T ss_pred ceEEEEECCCCeEEEEE
Confidence 89999999999998643
No 283
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=90.81 E-value=0.57 Score=41.48 Aligned_cols=70 Identities=14% Similarity=0.110 Sum_probs=41.8
Q ss_pred hHHhhhhhcCCcEE-EE-----cCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCC
Q 005023 4 RSFCGGTKTRRTHF-LI-----NTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWP 77 (718)
Q Consensus 4 ~a~~~Ak~e~K~ii-~y-----~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP 77 (718)
+.++...++++.+| .. +||++|+... ..|++ .+-.|..|-|+ +.|++-+. +..++|....|
T Consensus 7 ~~v~~~i~~~~Vvlf~kg~~~~~~Cp~C~~ak-~~L~~------~gi~y~~~di~--~d~~~~~~----l~~~~g~~tvP 73 (111)
T 3zyw_A 7 LRLKKLTHAAPCMLFMKGTPQEPRCGFSKQMV-EILHK------HNIQFSSFDIF--SDEEVRQG----LKAYSSWPTYP 73 (111)
T ss_dssp HHHHHHHTSSSEEEEESBCSSSBSSHHHHHHH-HHHHH------TTCCCEEEEGG--GCHHHHHH----HHHHHTCCSSC
T ss_pred HHHHHHHhcCCEEEEEecCCCCCcchhHHHHH-HHHHH------cCCCeEEEECc--CCHHHHHH----HHHHHCCCCCC
Confidence 45666677776654 33 8999999865 23322 23346655444 44554333 33457888889
Q ss_pred cEEEeCCCCcee
Q 005023 78 LSVFLSPDLKPL 89 (718)
Q Consensus 78 ~~vfl~p~g~p~ 89 (718)
..++ +|+.+
T Consensus 74 ~ifi---~g~~i 82 (111)
T 3zyw_A 74 QLYV---SGELI 82 (111)
T ss_dssp EEEE---TTEEE
T ss_pred EEEE---CCEEE
Confidence 8644 56665
No 284
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=90.49 E-value=0.36 Score=46.10 Aligned_cols=16 Identities=0% Similarity=-0.230 Sum_probs=14.1
Q ss_pred CCcEEEeCCCCceeec
Q 005023 76 WPLSVFLSPDLKPLMG 91 (718)
Q Consensus 76 wP~~vfl~p~g~p~~~ 91 (718)
.|++++++++|+++..
T Consensus 152 ~P~~~lid~~G~i~~~ 167 (185)
T 2gs3_A 152 NFTKFLIDKNGCVVKR 167 (185)
T ss_dssp SCCEEEECTTSCEEEE
T ss_pred cceEEEECCCCCEEEe
Confidence 5999999999999864
No 285
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=90.32 E-value=0.36 Score=43.49 Aligned_cols=69 Identities=10% Similarity=0.116 Sum_probs=40.4
Q ss_pred hHHhhhhhcCCcEEE-Ec-----CCchhhhhhccccCcHHHHHHhhcccE----EEEecCCCCcchHHHHHHHHHHhcCC
Q 005023 4 RSFCGGTKTRRTHFL-IN-----TCHWCHVMEVESFEDEGVAKLLNDWFV----SIKVDREERPDVDKVYMTYVQALYGG 73 (718)
Q Consensus 4 ~a~~~Ak~e~K~ii~-y~-----~C~wChvM~~esf~d~~va~~ln~~Fv----~vkvD~ee~pd~d~~y~~~~q~~~g~ 73 (718)
+.++...++|+.+|- .+ ||+||+... ++|+++=| ...+|.++.|++-+. +..++|.
T Consensus 7 ~~v~~~i~~~~Vvvfsk~t~~~p~Cp~C~~ak----------~lL~~~gv~~~~~~~~dv~~~~~~~~~----l~~~sg~ 72 (121)
T 3gx8_A 7 KAIEDAIESAPVVLFMKGTPEFPKCGFSRATI----------GLLGNQGVDPAKFAAYNVLEDPELREG----IKEFSEW 72 (121)
T ss_dssp HHHHHHHHSCSEEEEESBCSSSBCTTHHHHHH----------HHHHHHTBCGGGEEEEECTTCHHHHHH----HHHHHTC
T ss_pred HHHHHHhccCCEEEEEeccCCCCCCccHHHHH----------HHHHHcCCCcceEEEEEecCCHHHHHH----HHHHhCC
Confidence 456677777776543 34 899999865 33443322 233555565555443 3345777
Q ss_pred CCCCcEEEeCCCCcee
Q 005023 74 GGWPLSVFLSPDLKPL 89 (718)
Q Consensus 74 ~GwP~~vfl~p~g~p~ 89 (718)
...|..+| +|+.+
T Consensus 73 ~tvP~vfI---~g~~i 85 (121)
T 3gx8_A 73 PTIPQLYV---NKEFI 85 (121)
T ss_dssp CSSCEEEE---TTEEE
T ss_pred CCCCeEEE---CCEEE
Confidence 77887644 56665
No 286
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=90.19 E-value=0.58 Score=47.71 Aligned_cols=37 Identities=19% Similarity=-0.095 Sum_probs=24.3
Q ss_pred CCCcEEEeCCCCceeecccccCCCCCCCcccHHHHHHHHHH
Q 005023 75 GWPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRKVKD 115 (718)
Q Consensus 75 GwP~~vfl~p~g~p~~~~~y~p~~~~~~~~~f~~~L~~i~~ 115 (718)
++|.+++++|+|+......|-.+. | ..+-++|+.|..
T Consensus 123 ~~p~~fIID~dG~I~~~~~~~~~~---g-r~~~Ellr~I~a 159 (249)
T 3a2v_A 123 TVRGVFIVDARGVIRTMLYYPMEL---G-RLVDEILRIVKA 159 (249)
T ss_dssp CCEEEEEECTTSBEEEEEEECTTB---C-CCHHHHHHHHHH
T ss_pred ccceEEEECCCCeEEEEEecCCcc---c-chhHHHHHHHHH
Confidence 899999999999998755432221 1 146666665543
No 287
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=89.54 E-value=0.98 Score=43.71 Aligned_cols=15 Identities=7% Similarity=0.084 Sum_probs=12.8
Q ss_pred CcEEEeCCCCceeec
Q 005023 77 PLSVFLSPDLKPLMG 91 (718)
Q Consensus 77 P~~vfl~p~g~p~~~ 91 (718)
|++++++++|+....
T Consensus 146 ~~~~liD~~G~i~~~ 160 (200)
T 2b7k_A 146 IFFYLMDPEGQFVDA 160 (200)
T ss_dssp CCEEEECTTSCEEEE
T ss_pred ceEEEECCCCcEEEE
Confidence 488999999999853
No 288
>1wzz_A Probable endoglucanase; glycoside hydrolase family 8 (GH-8), (alpha/alpha)6 barrel, structural genomics; 1.65A {Gluconacetobacter xylinus} SCOP: a.102.1.2
Probab=88.96 E-value=5.2 Score=42.45 Aligned_cols=180 Identities=12% Similarity=0.027 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCCchhhhchHHH-HHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHH
Q 005023 384 EKYLNILGECRRKLFDVRSKRPRPHLDDKVIVSWNGL-VISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAAS 462 (718)
Q Consensus 384 ~~~~~~l~~~r~~L~~~R~~R~~P~~Ddkilt~WNgl-~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~ 462 (718)
+++.+..+..+++-+....+-+.+.-.+-.++--.|. |+-|+.. +| + +.=.++..
T Consensus 17 ~~~~~~w~~~k~~~l~~~GrviD~~n~~~t~SEGqgYGMl~Av~~-----~d----------------~---~~FD~l~~ 72 (334)
T 1wzz_A 17 DAVAQQWAIFRAKYLRPSGRVVDTGNGGESHSEGQGYGMLFAASA-----GD----------------L---ASFQSMWM 72 (334)
T ss_dssp THHHHHHHHHHHHHBCTTSCBCCSSSSCEEEHHHHHHHHHHHHHH-----TC----------------H---HHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCceEEecCCCCEEecHHHHHHHHHHHHh-----CC----------------H---HHHHHHHH
Confidence 4566677788877776532222333222225555554 3333332 23 1 22246778
Q ss_pred HHHHhccccCCCeEEEeecC-CCC---CCCCCcccHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcccccCCcccc
Q 005023 463 FIRRHLYDEQTHRLQHSFRN-GPS---KAPGFLDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDREGGGYFN 538 (718)
Q Consensus 463 ~l~~~~~d~~~g~l~~~~~~-g~~---~~~~~l~DyA~li~all~LYeaTgd~~~L~~A~~L~~~~~~~F~D~~~Gg~f~ 538 (718)
|.++++...++|.+-+.+.. +.. ....=.++=-+++.||+...+..++..|+..|.+|++.+.++=....+|....
T Consensus 73 wt~~~l~~~~~~L~aW~~~~~~~~~v~d~n~AtDgDl~IA~ALl~A~~~Wg~~~Y~~~A~~il~~i~~~~v~~~~g~~~l 152 (334)
T 1wzz_A 73 WARTNLQHTNDKLFSWRFLKGHQPPVPDKNNATDGDLLIALALGRAGKRFQRPDYIQDAMAIYGDVLNLMTMKAGPYVVL 152 (334)
T ss_dssp HHHHHTBCSSSSCBCSEEETTSSSSSCCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHEEEETTEEEE
T ss_pred HHHHHhccCCCCceEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcccCCCCeEEE
Confidence 88888865456666666533 221 22233555678999999999999999999999999999888765543443222
Q ss_pred CCCCCCccccccccCCCCCCCChHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHH
Q 005023 539 TTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAGSKSDYYRQNAEHSLAVFE 596 (718)
Q Consensus 539 t~~~~~~l~~r~k~~~D~a~PS~ns~~a~~LlrL~~lt~~~~~~~y~e~a~~~l~~~~ 596 (718)
.+....- .+...+...||=- +...+-.++..+++ ..|.+.++..++.+.
T Consensus 153 lPg~~gf----~~~~~~~~npSY~--~p~~~~~fa~~~~~---~~W~~~~~~~~~ll~ 201 (334)
T 1wzz_A 153 MPGAVGF----TKKDSVILNLSYY--VMPSLLQAFDLTAD---PRWRQVMEDGIRLVS 201 (334)
T ss_dssp CSCSSSC----BCSSEEEECGGGC--CHHHHHHHHHHHCC---THHHHHHHHHHHHHH
T ss_pred CCCcccc----cCCCCCeechhhc--CHHHHHHHHHccCC---chHHHHHHHHHHHHH
Confidence 2221100 0000011123322 22456667888775 578888877777653
No 289
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=88.88 E-value=0.66 Score=38.63 Aligned_cols=61 Identities=15% Similarity=0.111 Sum_probs=34.5
Q ss_pred EEEc----CCchhhhhhccccCcHHHHHHhhcccEEEEecCC---CCcchHHHHHHHHHHhcCCC-----CCCcEEEeCC
Q 005023 17 FLIN----TCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDRE---ERPDVDKVYMTYVQALYGGG-----GWPLSVFLSP 84 (718)
Q Consensus 17 i~y~----~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~e---e~pd~d~~y~~~~q~~~g~~-----GwP~~vfl~p 84 (718)
++.+ +|++|+...+ . -+..+-.|..|.||.. +.|+..+. ....+|.. ..|..++ +
T Consensus 5 Y~~~~~~~~Cp~C~~ak~-~------L~~~gi~y~~idI~~~~~~~~~~~~~~----l~~~~g~~~~~~~tvP~v~i--~ 71 (87)
T 1aba_A 5 YGYDSNIHKCGPCDNAKR-L------LTVKKQPFEFINIMPEKGVFDDEKIAE----LLTKLGRDTQIGLTMPQVFA--P 71 (87)
T ss_dssp EECCTTTSCCHHHHHHHH-H------HHHTTCCEEEEESCSBTTBCCHHHHHH----HHHHHTCSCCTTCCSCEEEC--T
T ss_pred EEeCCCCCcCccHHHHHH-H------HHHcCCCEEEEEeeccccccCHHHHHH----HHHHhCCCCCCCCccCEEEE--E
Confidence 4568 9999998552 2 2223334665555532 33433332 33346777 8897554 5
Q ss_pred CCceee
Q 005023 85 DLKPLM 90 (718)
Q Consensus 85 ~g~p~~ 90 (718)
+|+.+.
T Consensus 72 ~g~~ig 77 (87)
T 1aba_A 72 DGSHIG 77 (87)
T ss_dssp TSCEEE
T ss_pred CCEEEe
Confidence 777763
No 290
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=88.33 E-value=1.3 Score=41.65 Aligned_cols=16 Identities=31% Similarity=0.237 Sum_probs=13.7
Q ss_pred CCCcEEEeCCCCceee
Q 005023 75 GWPLSVFLSPDLKPLM 90 (718)
Q Consensus 75 GwP~~vfl~p~g~p~~ 90 (718)
..|++++++|+|+...
T Consensus 126 ~~~~~~lID~~G~i~~ 141 (170)
T 3me7_A 126 HPNVVVVLSPELQIKD 141 (170)
T ss_dssp CCCEEEEECTTSBEEE
T ss_pred cCceEEEECCCCeEEE
Confidence 4688999999999874
No 291
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=88.29 E-value=2.8 Score=47.41 Aligned_cols=115 Identities=13% Similarity=0.158 Sum_probs=73.1
Q ss_pred cCCCCCCC---CCCCChhHHH---HHHHhhhhh---cc------cCCCCCCHHHHHHHHHHHHHHHhCCCcccCCCcEEE
Q 005023 171 RFGGFGSA---PKFPRPVEIQ---MMLYHSKKL---ED------TGKSGEASEGQKMVLFTLQCMAKGGIHDHVGGGFHR 235 (718)
Q Consensus 171 ~~GGfg~a---pKFP~~~~l~---~Ll~~~~~~---~~------~~~~~~~~~~~~~~~~TL~~m~~gGi~D~v~GGF~R 235 (718)
..|||..| -||-.|+... +|+-+.... .+ .++..+-+.+++.+..-++-|.+ +++.-.|+||.
T Consensus 137 l~GGwyDAGD~~K~~~p~a~t~~~L~~a~~~~~~~~~~~~~i~es~~~~~~~d~ldeikwg~D~llk--~~~~~~g~~y~ 214 (537)
T 3gzk_A 137 CPGGWHDAGDYGKYTVPAAKAVADLLLAHEYFPAALAHVRPMRSVHRAPHLPPALEVAREEIAWLLT--MQDPATGGVYH 214 (537)
T ss_dssp CCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHCHHHHHTCCCSGGGSCSSCCCHHHHHHHHHHHHHHH--TBCTTTCCBBS
T ss_pred cccceecCCCcceecccHHHHHHHHHHHHHHhhhhhhhhhccccccCcccHHHHHHHHHHHHHHHHh--cccCCCCeEEE
Confidence 56999655 6776665332 344433211 00 01111136899999999998887 45433344442
Q ss_pred Eec-CCCC----CCCC--------CcchHHHHHHHHHHHHHHHHccCC------hHHHHHHHHHHHHHHHhc
Q 005023 236 YSV-DERW----HVPH--------FEKMLYDQGQLANVYLDAFSLTKD------VFYSYICRDILDYLRRDM 288 (718)
Q Consensus 236 Ysv-D~~W----~vPH--------FEKmLyDnA~ll~~ya~Ay~~t~~------~~y~~~A~~~~~~l~~~m 288 (718)
.| |..| ..|+ +.+-.-.++.++.+++.|+++.++ ..|++.|++..+|+.++.
T Consensus 215 -~v~~~~w~g~~~~Pe~~~~~R~~~~~~t~~~~~~AAalA~as~vf~~~D~~yA~~~L~~A~~~~~fa~~~~ 285 (537)
T 3gzk_A 215 -KVTTPSFPPLDTRPEDDDAPLVLSPISYAATATFCAAMAHAALVYRPFDPALSSCCADAARRAYAWLGAHE 285 (537)
T ss_dssp -EEECSSCCCTTCCGGGCCSCEEECCBCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHTSC
T ss_pred -EecCCCcCCCCcCcccCCCcceEeecCCcHHHHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHHHHHHhcc
Confidence 22 5567 4443 233344589999999999999997 778899999999998753
No 292
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=87.54 E-value=1.4 Score=42.55 Aligned_cols=33 Identities=12% Similarity=-0.043 Sum_probs=23.2
Q ss_pred cCCCCCCcEEEeCCCCceeecccccCCCCCCCcccHHHHHHHHH
Q 005023 71 YGGGGWPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRKVK 114 (718)
Q Consensus 71 ~g~~GwP~~vfl~p~g~p~~~~~y~p~~~~~~~~~f~~~L~~i~ 114 (718)
.|+.|+|+.+| +|+.+.++. |.+ .|.++|+.+.
T Consensus 150 ~gv~gtPt~vv---ng~~~~~~~--~~e------~l~~~i~~ll 182 (193)
T 3hz8_A 150 FQIDGVPTVIV---GGKYKVEFA--DWE------SGMNTIDLLA 182 (193)
T ss_dssp TTCCSSSEEEE---TTTEEECCS--SHH------HHHHHHHHHH
T ss_pred hCCCcCCEEEE---CCEEEecCC--CHH------HHHHHHHHHH
Confidence 47889999987 788887643 543 5776666554
No 293
>2sqc_A Squalene-hopene cyclase; isomerase, triterpene cyclase, monotopic membrane protein, QW-sequence, repeat; HET: C8E; 2.00A {Alicyclobacillus acidocaldarius} SCOP: a.102.4.2 a.102.4.2 PDB: 3sqc_A 1ump_A* 1h35_A* 1h36_A* 1h37_A* 1h39_A* 1h3a_A* 1h3b_A* 1h3c_A* 1o6h_A* 1o6q_A* 1gsz_A* 1o79_A* 1sqc_A* 1o6r_A*
Probab=87.50 E-value=16 Score=41.93 Aligned_cols=131 Identities=17% Similarity=0.264 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHhccccc------------CCCCC--CCCCC-CChhHHHHHHHhhhhhcccCCCCCCHHHHHHHHHHHH
Q 005023 154 QNALRLCAEQLSKSYDSR------------FGGFG--SAPKF-PRPVEIQMMLYHSKKLEDTGKSGEASEGQKMVLFTLQ 218 (718)
Q Consensus 154 ~~~~~~~~~~l~~~~D~~------------~GGfg--~apKF-P~~~~l~~Ll~~~~~~~~~~~~~~~~~~~~~~~~TL~ 218 (718)
...+.++.+.|.+..-.. .|||+ ..+.+ |....-.+.+....... . ..++...+.+.+.++
T Consensus 330 ~~~~~ka~~~L~~~q~~~~g~~~~~~~~~s~GgW~f~~~~~~~p~v~dTA~al~AL~~~~---~-~~~~~~~~~l~~a~~ 405 (631)
T 2sqc_A 330 HDRLVKAGEWLLDRQITVPGDWAVKRPNLKPGGFAFQFDNVYYPDVCDTAVVVWALNTLR---L-PDERRRRDAMTKGFR 405 (631)
T ss_dssp CHHHHHHHHHHHHTCCCSCCGGGGTCTTSCCCCBCSSSSCTTCCBHHHHHHHHHHHTTCC---C-SCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCCChhhhcCCCCCCCCccccCCCCCCchHHHHHHHHHHHHcC---C-CccchhHHHHHHHHH
Confidence 346778888887654322 25543 33444 43322223332222111 0 111233455666666
Q ss_pred HHHhCCCcccCCCcEEEEecCC--CCC--CCCCc--------chHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHH
Q 005023 219 CMAKGGIHDHVGGGFHRYSVDE--RWH--VPHFE--------KMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRR 286 (718)
Q Consensus 219 ~m~~gGi~D~v~GGF~RYsvD~--~W~--vPHFE--------KmLyDnA~ll~~ya~Ay~~t~~~~y~~~A~~~~~~l~~ 286 (718)
-+.. . -.-+|||-.|..+. .|. +| |+ --+.+.|..+.++... +.+.+...++++++||.+
T Consensus 406 wLls--~-Q~~dGgf~~~~~~~~~~~~~~~~-F~~~~~~~d~~~vd~Ta~vl~aL~~~----g~~~~~~~i~rai~~L~~ 477 (631)
T 2sqc_A 406 WIVG--M-QSSNGGWGAYDVDNTSDLPNHIP-FSDFGEVTDPPSEDVTAHVLECFGSF----GYDDAWKVIRRAVEYLKR 477 (631)
T ss_dssp HHHH--T-CCTTSCBCSSCSSCCCSGGGGST-TCSSSCSSCCCBHHHHHHHHHHHHTT----TCCTTSHHHHHHHHHHHH
T ss_pred HHHh--h-cCCCCCCCccCCCCccccccccc-cccCCcccCCCCchHHHHHHHHHHhc----CCCccHHHHHHHHHHHHH
Confidence 6654 1 22368885444332 221 23 32 1245677787777653 445667788999999987
Q ss_pred hccCCCCceee
Q 005023 287 DMIGPGGEIFS 297 (718)
Q Consensus 287 ~m~~p~Ggf~s 297 (718)
++.++||||.
T Consensus 478 -~Q~~DGsw~g 487 (631)
T 2sqc_A 478 -EQKPDGSWFG 487 (631)
T ss_dssp -HCCTTSCCCC
T ss_pred -hcCCCCCCCC
Confidence 6788999864
No 294
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=87.42 E-value=0.52 Score=46.88 Aligned_cols=18 Identities=0% Similarity=-0.296 Sum_probs=15.6
Q ss_pred CCCcEEEeCCCCceeecc
Q 005023 75 GWPLSVFLSPDLKPLMGG 92 (718)
Q Consensus 75 GwP~~vfl~p~g~p~~~~ 92 (718)
..|++++++++|+..+..
T Consensus 145 ~~P~~~lID~~G~I~~~~ 162 (221)
T 2c0d_A 145 ALRGLFIIDKNGCVRHQT 162 (221)
T ss_dssp ECEEEEEECTTSBEEEEE
T ss_pred ccceEEEECCCCeEEEEE
Confidence 579999999999998753
No 295
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=87.36 E-value=0.62 Score=43.45 Aligned_cols=35 Identities=20% Similarity=0.086 Sum_probs=23.9
Q ss_pred CCcEEEeCCCCceeecc-cccCCCCCCCcccHHHHHHHHH
Q 005023 76 WPLSVFLSPDLKPLMGG-TYFPPEDKYGRPGFKTILRKVK 114 (718)
Q Consensus 76 wP~~vfl~p~g~p~~~~-~y~p~~~~~~~~~f~~~L~~i~ 114 (718)
.|.+++++++|+..+.. +.-+ ...+.+.++|+.|.
T Consensus 129 ~p~~~liD~~G~i~~~~~~~~~----~~~~~~~~il~~l~ 164 (166)
T 3p7x_A 129 ARAVFVLDADNKVVYKEIVSEG----TDFPDFDAALAAYK 164 (166)
T ss_dssp CCEEEEECTTCBEEEEEECSBT----TSCCCHHHHHHHHH
T ss_pred eeEEEEECCCCeEEEEEEcCCc----ccCCCHHHHHHHHh
Confidence 79999999999998642 1111 12356777777664
No 296
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=86.37 E-value=2.1 Score=40.59 Aligned_cols=32 Identities=19% Similarity=0.065 Sum_probs=19.8
Q ss_pred cCCCCCCcEEEeCCCCceeecccccCCCCCCCcccHHHHHHHH
Q 005023 71 YGGGGWPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRKV 113 (718)
Q Consensus 71 ~g~~GwP~~vfl~p~g~p~~~~~y~p~~~~~~~~~f~~~L~~i 113 (718)
.|+.|+|+.+| +|+.+..+ + |.+ .|.++|+.+
T Consensus 151 ~gv~gtPt~vi---ng~~~~~g-~-~~~------~l~~~i~~~ 182 (193)
T 2rem_A 151 VRPVGTPTIVV---NGRYMVTG-H-DFE------DTLRITDYL 182 (193)
T ss_dssp HCCSSSSEEEE---TTTEEECC-S-SHH------HHHHHHHHH
T ss_pred hCCCCCCeEEE---CCEEEecC-C-CHH------HHHHHHHHH
Confidence 48999999555 67766432 3 433 466666554
No 297
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=85.91 E-value=1.2 Score=41.42 Aligned_cols=35 Identities=17% Similarity=0.097 Sum_probs=22.4
Q ss_pred CCcEEEeCCCCceeecc-cccCCCCCCCcccHHHHHHHHH
Q 005023 76 WPLSVFLSPDLKPLMGG-TYFPPEDKYGRPGFKTILRKVK 114 (718)
Q Consensus 76 wP~~vfl~p~g~p~~~~-~y~p~~~~~~~~~f~~~L~~i~ 114 (718)
.|++++++++|+..+.. +..|. +.+.+-++++.|.
T Consensus 119 ~p~tflID~~G~I~~~~~~~~~~----~~~~~~eil~~l~ 154 (157)
T 4g2e_A 119 KRAVFVIDKEGKVRYKWVSDDPT----KEPPYDEIEKVVK 154 (157)
T ss_dssp CEEEEEECTTSBEEEEEEESSTT----CCCCHHHHHHHHH
T ss_pred eeeEEEECCCCEEEEEEECCCCC----CCCCHHHHHHHHH
Confidence 57889999999987643 22222 3456666666554
No 298
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=85.17 E-value=2.2 Score=40.43 Aligned_cols=17 Identities=6% Similarity=0.034 Sum_probs=14.3
Q ss_pred CCcEEEeCCCCceeecc
Q 005023 76 WPLSVFLSPDLKPLMGG 92 (718)
Q Consensus 76 wP~~vfl~p~g~p~~~~ 92 (718)
.|++++++|+|++.+..
T Consensus 141 ~p~~~lID~~G~I~~~~ 157 (179)
T 3ixr_A 141 ERSTFLIGPTHRIVEAW 157 (179)
T ss_dssp CCEEEEECTTSBEEEEE
T ss_pred ceEEEEECCCCEEEEEE
Confidence 58899999999998643
No 299
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=84.83 E-value=0.76 Score=42.86 Aligned_cols=33 Identities=33% Similarity=0.554 Sum_probs=24.0
Q ss_pred cCCCCCCcEEEeCCCCceeecccccCCCCCCCcccHHHHHHHH
Q 005023 71 YGGGGWPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRKV 113 (718)
Q Consensus 71 ~g~~GwP~~vfl~p~g~p~~~~~y~p~~~~~~~~~f~~~L~~i 113 (718)
.|+.|+|+.+| .+|+.+ .++.|++ .|.++|+.+
T Consensus 105 ~gI~gtPt~vi--~nG~~i--~G~~~~~------~l~~~i~~~ 137 (147)
T 3gv1_A 105 FGFNGTPTLVF--PNGRTQ--SGYSPMP------QLEEIIRKN 137 (147)
T ss_dssp TTCCSSCEEEC--TTSCEE--ESCCCTT------HHHHHHHHT
T ss_pred hCCCccCEEEE--ECCEEe--eCCCCHH------HHHHHHHHH
Confidence 58899999998 578865 4566766 576666543
No 300
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=84.81 E-value=0.85 Score=38.58 Aligned_cols=60 Identities=10% Similarity=0.089 Sum_probs=30.6
Q ss_pred EEEcCCchhhhhhccccCcHHHHHHhhcc---cEEEEecCCCCcchHHHHHHHHHHhcC--CCCCCcEEEeCCCCcee
Q 005023 17 FLINTCHWCHVMEVESFEDEGVAKLLNDW---FVSIKVDREERPDVDKVYMTYVQALYG--GGGWPLSVFLSPDLKPL 89 (718)
Q Consensus 17 i~y~~C~wChvM~~esf~d~~va~~ln~~---Fv~vkvD~ee~pd~d~~y~~~~q~~~g--~~GwP~~vfl~p~g~p~ 89 (718)
+..++|++|++.++ -..+.++|+++ |..| |.++.|+.-+ ..+..+| ....|.. |+ +|+.+
T Consensus 7 y~~~~C~~c~~~~~----~~~ak~~L~~~~i~~~~~--di~~~~~~~~----~l~~~~g~~~~~vP~i-fi--~g~~i 71 (93)
T 1t1v_A 7 YSTSVTGSREIKSQ----QSEVTRILDGKRIQYQLV--DISQDNALRD----EMRTLAGNPKATPPQI-VN--GNHYC 71 (93)
T ss_dssp EECSSCSCHHHHHH----HHHHHHHHHHTTCCCEEE--ETTSCHHHHH----HHHHHTTCTTCCSCEE-EE--TTEEE
T ss_pred EEcCCCCCchhhHH----HHHHHHHHHHCCCceEEE--ECCCCHHHHH----HHHHHhCCCCCCCCEE-EE--CCEEE
Confidence 34589999953321 12233445443 5544 4445444333 2333466 5578865 44 45554
No 301
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=84.69 E-value=1.7 Score=41.37 Aligned_cols=19 Identities=21% Similarity=0.377 Sum_probs=13.3
Q ss_pred CCcEEE---EcCCchhhhhhcc
Q 005023 13 RRTHFL---INTCHWCHVMEVE 31 (718)
Q Consensus 13 ~K~ii~---y~~C~wChvM~~e 31 (718)
+|+.|. ..+|+||+.++.+
T Consensus 22 ~~~~i~~f~d~~Cp~C~~~~~~ 43 (195)
T 2znm_A 22 GKIEVLEFFGYFCVHCHHFDPL 43 (195)
T ss_dssp SSEEEEEEECTTSCCTTSSCHH
T ss_pred CCcEEEEEECCCChhHHHHhHH
Confidence 444443 4899999998753
No 302
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=83.95 E-value=4.9 Score=39.62 Aligned_cols=15 Identities=27% Similarity=0.363 Sum_probs=13.1
Q ss_pred CcEEEeCCCCceeec
Q 005023 77 PLSVFLSPDLKPLMG 91 (718)
Q Consensus 77 P~~vfl~p~g~p~~~ 91 (718)
|++++++++|++...
T Consensus 178 pttfLID~~G~vv~~ 192 (215)
T 2i3y_A 178 FEKFLVGPDGIPVMR 192 (215)
T ss_dssp TCEEEECTTSCEEEE
T ss_pred ceEEEECCCCeEEEE
Confidence 799999999999853
No 303
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=83.90 E-value=3.4 Score=40.43 Aligned_cols=15 Identities=27% Similarity=0.386 Sum_probs=13.1
Q ss_pred CcEEEeCCCCceeec
Q 005023 77 PLSVFLSPDLKPLMG 91 (718)
Q Consensus 77 P~~vfl~p~g~p~~~ 91 (718)
|++++++++|++...
T Consensus 160 ~ttflID~~G~i~~~ 174 (207)
T 2r37_A 160 FEKFLVGPDGIPIMR 174 (207)
T ss_dssp TCEEEECTTSCEEEE
T ss_pred ceEEEECCCCcEEEE
Confidence 799999999999853
No 304
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=83.32 E-value=2.2 Score=39.16 Aligned_cols=20 Identities=20% Similarity=0.129 Sum_probs=14.9
Q ss_pred cCCCCCC------cEEEeCCCCceeec
Q 005023 71 YGGGGWP------LSVFLSPDLKPLMG 91 (718)
Q Consensus 71 ~g~~GwP------~~vfl~p~g~p~~~ 91 (718)
+|..+.| +++++ ++|+..+.
T Consensus 107 ~gv~~~p~~g~~~~~~li-~~G~i~~~ 132 (159)
T 2a4v_A 107 LGAKKTPLSGSIRSHFIF-VDGKLKFK 132 (159)
T ss_dssp HTCBSSSSSCBCCEEEEE-ETTEEEEE
T ss_pred hCCcccccCCccceEEEE-cCCEEEEE
Confidence 5666666 78888 99998864
No 305
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.29 E-value=0.91 Score=40.02 Aligned_cols=61 Identities=11% Similarity=0.080 Sum_probs=31.3
Q ss_pred EEcCCchhhhhhccccCcHHHHHHhhcccEE-EEecCCCCcchHHHHHHHHHHhc--------CCCCCCcEEEeCCCCce
Q 005023 18 LINTCHWCHVMEVESFEDEGVAKLLNDWFVS-IKVDREERPDVDKVYMTYVQALY--------GGGGWPLSVFLSPDLKP 88 (718)
Q Consensus 18 ~y~~C~wChvM~~esf~d~~va~~ln~~Fv~-vkvD~ee~pd~d~~y~~~~q~~~--------g~~GwP~~vfl~p~g~p 88 (718)
..++|++|++.++ -..+.++|+++=|. ..+|.++.|+..+.+.. .. |....|.. |+ +|+.
T Consensus 14 ~~~~C~~C~~~~~----~~~ak~~L~~~gi~y~~vdI~~~~~~~~~l~~----~~~~~~~~~~g~~tvP~v-fi--~g~~ 82 (111)
T 2ct6_A 14 IASSSGFVAIKKK----QQDVVRFLEANKIEFEEVDITMSEEQRQWMYK----NVPPEKKPTQGNPLPPQI-FN--GDRY 82 (111)
T ss_dssp ECSSCSCHHHHHH----HHHHHHHHHHTTCCEEEEETTTCHHHHHHHHH----SCCTTTCCSSSSCCSCEE-EE--TTEE
T ss_pred EcCCCCCcccchh----HHHHHHHHHHcCCCEEEEECCCCHHHHHHHHH----HhcccccccCCCCCCCEE-EE--CCEE
Confidence 3589999995221 11233455544233 24566665655443332 32 55566754 44 4554
Q ss_pred e
Q 005023 89 L 89 (718)
Q Consensus 89 ~ 89 (718)
+
T Consensus 83 i 83 (111)
T 2ct6_A 83 C 83 (111)
T ss_dssp E
T ss_pred E
Confidence 4
No 306
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=81.94 E-value=1.6 Score=39.29 Aligned_cols=60 Identities=12% Similarity=0.205 Sum_probs=35.1
Q ss_pred hhHHhhhhhcCCcEEE-Ec-----CCchhhhhhccccCcHHHHHHhhcccE--EEEecCCCCcchHHHHHHHHHHhcCCC
Q 005023 3 RRSFCGGTKTRRTHFL-IN-----TCHWCHVMEVESFEDEGVAKLLNDWFV--SIKVDREERPDVDKVYMTYVQALYGGG 74 (718)
Q Consensus 3 ~~a~~~Ak~e~K~ii~-y~-----~C~wChvM~~esf~d~~va~~ln~~Fv--~vkvD~ee~pd~d~~y~~~~q~~~g~~ 74 (718)
++.++...++|+.||- .+ .|++|+... ++|++.-| ...+|.++.|++.+.+++ ++
T Consensus 10 ~e~i~~~i~~~~VvvF~Kgt~~~P~C~fc~~ak----------~lL~~~gv~~~~~~~v~~~~~~r~~l~~----~s--- 72 (118)
T 2wul_A 10 AEQLDALVKKDKVVVFLKGTPEQPQCGFSNAVV----------QILRLHGVRDYAAYNVLDDPELRQGIKD----YS--- 72 (118)
T ss_dssp HHHHHHHHHHSSEEEEESBCSSSBSSHHHHHHH----------HHHHHTTCCSCEEEETTSCHHHHHHHHH----HH---
T ss_pred HHHHHHHHhcCCEEEEEcCCCCCCCCHHHHHHH----------HHHHHhCCcCeEeecccCCHHHHHHHHH----hc---
Confidence 4567777788877643 23 499999854 34443322 133455666776555443 34
Q ss_pred CCCcE
Q 005023 75 GWPLS 79 (718)
Q Consensus 75 GwP~~ 79 (718)
||||.
T Consensus 73 g~~Tv 77 (118)
T 2wul_A 73 NWPTI 77 (118)
T ss_dssp TCCSS
T ss_pred cCCCC
Confidence 56664
No 307
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=81.93 E-value=3 Score=41.40 Aligned_cols=57 Identities=18% Similarity=0.227 Sum_probs=33.9
Q ss_pred EEEcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCceee
Q 005023 17 FLINTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLM 90 (718)
Q Consensus 17 i~y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p~~ 90 (718)
+.++||++|+... ..+ +..+-.|..|.|+.+ |.... +...+|..+.|..++ +|+.+.
T Consensus 175 y~~~~Cp~C~~a~-~~L------~~~~i~~~~~~i~~~--~~~~~-----l~~~~g~~~vP~~~~---~g~~i~ 231 (241)
T 1nm3_A 175 FTKPGCPFCAKAK-QLL------HDKGLSFEEIILGHD--ATIVS-----VRAVSGRTTVPQVFI---GGKHIG 231 (241)
T ss_dssp EECSSCHHHHHHH-HHH------HHHTCCCEEEETTTT--CCHHH-----HHHHTCCSSSCEEEE---TTEEEE
T ss_pred EECCCChHHHHHH-HHH------HHcCCceEEEECCCc--hHHHH-----HHHHhCCCCcCEEEE---CCEEEE
Confidence 3468999999764 222 223445666656543 44322 233478889998654 567664
No 308
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=81.81 E-value=3.2 Score=41.58 Aligned_cols=38 Identities=8% Similarity=0.040 Sum_probs=26.0
Q ss_pred CCcEEEeCCCCceeecccccCCCCCCCcccHHHHHHHHHHH
Q 005023 76 WPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRKVKDA 116 (718)
Q Consensus 76 wP~~vfl~p~g~p~~~~~y~p~~~~~~~~~f~~~L~~i~~~ 116 (718)
.|.+++++++|++.+....- +-.+.|.+-++|+.|..+
T Consensus 137 ~p~tfvID~dG~I~~~~~~~---~~~~~pd~~evl~~L~~l 174 (224)
T 3keb_A 137 SPAIILADAANVVHYSERLA---NTRDFFDFDAIEKLLQEG 174 (224)
T ss_dssp CCEEEEECTTCBEEEEEECS---BTTCCCCHHHHHHHHHHH
T ss_pred cCEEEEEcCCCEEEEEEecC---CCCCCCCHHHHHHHHHHh
Confidence 69999999999999754321 122345677777776544
No 309
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2
Probab=81.59 E-value=42 Score=38.59 Aligned_cols=163 Identities=12% Similarity=0.052 Sum_probs=88.7
Q ss_pred hhchHHHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCC-CeEEEeecCCCCC------
Q 005023 414 IVSWNGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQT-HRLQHSFRNGPSK------ 486 (718)
Q Consensus 414 lt~WNgl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~-g~l~~~~~~g~~~------ 486 (718)
.+-..+..++.|+.++..+++.-.....+-|-.+-..++.|+.++-..+||++.. +++. |.++|...++.-.
T Consensus 195 f~~p~a~t~~~L~w~~~~~~~~~~~~~~~ipes~~~~~d~ldeikwg~Dyllk~q-~~~~~g~~y~~vgd~~~~~~~~Pe 273 (639)
T 1clc_A 195 YVVNAGITVGSMFLAWEHFKDQLEPVALEIPEKNNSIPDFLDELKYEIDWILTMQ-YPDGSGRVAHKVSTRNFGGFIMPE 273 (639)
T ss_dssp EHHHHHHHHHHHHHHHHHSHHHHTTCCCSSGGGGSSSCHHHHHHHHHHHHHHTTB-CTTSSCCBEEEEECSSCCCSCCGG
T ss_pred eCccHHHHHHHHHHHHHHhhhhhhccccCCccCCCcHHHHHHHHHHHHHHHHHhc-cccCCCeEEEEecCCCCCCCCCch
Confidence 3345677888888888877652100000001001112689999999999999754 4445 8899875433111
Q ss_pred ---CCCC-----cccHHHHHHHHHHHHHHcC--Ch----HHHHHHHHHHHHHHHhcccccCCccccCCCCCCcccccccc
Q 005023 487 ---APGF-----LDDYAFLISGLLDLYEFGS--GT----KWLVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKE 552 (718)
Q Consensus 487 ---~~~~-----l~DyA~li~all~LYeaTg--d~----~~L~~A~~L~~~~~~~F~D~~~Gg~f~t~~~~~~l~~r~k~ 552 (718)
.+++ .+--+.++-+|...+.+.. |+ ++|+.|+++++.+.++ .|.+|..+... ...
T Consensus 274 ~~~~~R~~~~~~s~~a~e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~-----~~~~y~~~~~~------~~g 342 (639)
T 1clc_A 274 NEHDERFFVPWSSAATADFVAMTAMAARIFRPYDPQYAEKCINAAKVSYEFLKNN-----PANVFANQSGF------STG 342 (639)
T ss_dssp GCCSCCEEEEECHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHC-----CSCCCCCCTTC------CSC
T ss_pred hcCCCceEecCCcHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHc-----CCCccCCCccc------ccc
Confidence 1111 1112344555555555553 44 4577777777776552 23333321100 000
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHH
Q 005023 553 DHDGAEPSGNSVSVINLVRLASIVAGSKSDYYRQNAEHSLA 593 (718)
Q Consensus 553 ~~D~a~PS~ns~~a~~LlrL~~lt~~~~~~~y~e~a~~~l~ 593 (718)
.|.. -+-.-.++++-..|+..||+ ..|++.+++...
T Consensus 343 ~Y~s--s~~~DEl~WAAawLy~ATgd---~~Yl~~a~~~~~ 378 (639)
T 1clc_A 343 EYAT--VSDADDRLWAAAEMWETLGD---EEYLRDFENRAA 378 (639)
T ss_dssp CCCC--SCSHHHHHHHHHHHHHHHCC---HHHHHHHHHHHH
T ss_pred ccCC--CCcchHHHHHHHHHHHHhCC---HHHHHHHHHHHH
Confidence 1100 11123567888889999996 889999876543
No 310
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=80.34 E-value=1.9 Score=39.90 Aligned_cols=37 Identities=14% Similarity=0.007 Sum_probs=24.0
Q ss_pred CCcEEEeCCCCceeecccccCCCCCCCcccHHHHHHHHHH
Q 005023 76 WPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRKVKD 115 (718)
Q Consensus 76 wP~~vfl~p~g~p~~~~~y~p~~~~~~~~~f~~~L~~i~~ 115 (718)
.|++++++++|+..+....-. ....+.+.++|+.|.+
T Consensus 126 ~p~~~liD~~G~i~~~~~g~~---~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 126 ARAVFVLDTDNTIRYVEYVDN---INSEPNFEAAIAAAKA 162 (163)
T ss_dssp CCEEEEECTTCBEEEEEECSB---TTSCCCHHHHHHHHHH
T ss_pred EEEEEEEcCCCeEEEEEecCC---cCCCCCHHHHHHHHHh
Confidence 399999999999986432111 1224567777776653
No 311
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=80.09 E-value=1.6 Score=46.14 Aligned_cols=41 Identities=10% Similarity=0.080 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHhccCCCCce
Q 005023 254 QGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMIGPGGEI 295 (718)
Q Consensus 254 nA~ll~~ya~Ay~~t~~~~y~~~A~~~~~~l~~~m~~p~Ggf 295 (718)
-|..|.+++++|..++++.|++.+.+.++||+. |+.++||+
T Consensus 76 Ta~vl~~Larv~~~~~~~~y~~Ai~Rgl~wlL~-mQ~~nGGW 116 (332)
T 1gxm_A 76 TITEMVFLAEVYKSGGNTKYRDAVRKAANFLVN-SQYSTGAL 116 (332)
T ss_dssp THHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-HCCTTSCC
T ss_pred HHHHHHHHHHHhccccchHHHHHHHHHHHHHHh-ccCCCCCc
Confidence 578888899999999999999999999999997 99999997
No 312
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=79.59 E-value=2.2 Score=44.85 Aligned_cols=58 Identities=10% Similarity=0.124 Sum_probs=40.9
Q ss_pred EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCC--CCcchHHHHHHHHHHhcCCCC--CCcEEEeCCCCc
Q 005023 19 INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDRE--ERPDVDKVYMTYVQALYGGGG--WPLSVFLSPDLK 87 (718)
Q Consensus 19 y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~e--e~pd~d~~y~~~~q~~~g~~G--wP~~vfl~p~g~ 87 (718)
..||..|..|.. .| .++|+.++..+.-+.||.+ +.+++.+. +|..+ +|+.++++..+.
T Consensus 144 ~~~~~~~~~~~~-~~--~~~A~~~~~~i~f~~vd~~~~~~~~~~~~--------fgi~~~~~P~~~~~~~~~~ 205 (361)
T 3uem_A 144 PKSVSDYDGKLS-NF--KTAAESFKGKILFIFIDSDHTDNQRILEF--------FGLKKEECPAVRLITLEEE 205 (361)
T ss_dssp CSSSSSHHHHHH-HH--HHHHGGGTTTCEEEEECTTSGGGHHHHHH--------TTCCTTTCSEEEEEECC--
T ss_pred eCCchhHHHHHH-HH--HHHHHHccCceEEEEecCChHHHHHHHHH--------cCCCccCCccEEEEEcCCc
Confidence 369999998874 23 4677777777888889987 45544443 57655 999999987544
No 313
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=77.81 E-value=2 Score=43.66 Aligned_cols=18 Identities=0% Similarity=-0.415 Sum_probs=15.3
Q ss_pred CCCcEEEeCCCCceeecc
Q 005023 75 GWPLSVFLSPDLKPLMGG 92 (718)
Q Consensus 75 GwP~~vfl~p~g~p~~~~ 92 (718)
..|.+++++++|+..+..
T Consensus 181 ~~p~tflID~~G~I~~~~ 198 (254)
T 3tjj_A 181 TLRGLFIIDDKGILRQIT 198 (254)
T ss_dssp ECEEEEEECTTSBEEEEE
T ss_pred ccceEEEECCCCeEEEEE
Confidence 369999999999998754
No 314
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=76.24 E-value=2.1 Score=45.89 Aligned_cols=75 Identities=12% Similarity=0.077 Sum_probs=38.6
Q ss_pred HHhhhhhcCCcEE-EEcCCchhhhhhccccCcHHHHHHhhcccEEEEe-cCCCCcchHHHHHHHHHHhcCCCCCCcEEEe
Q 005023 5 SFCGGTKTRRTHF-LINTCHWCHVMEVESFEDEGVAKLLNDWFVSIKV-DREERPDVDKVYMTYVQALYGGGGWPLSVFL 82 (718)
Q Consensus 5 a~~~Ak~e~K~ii-~y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkv-D~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl 82 (718)
.++...++++.+| ..+||++|+...+.-++...| .|..|.| +.++..+ +..++..++..+|...+|.. |+
T Consensus 253 ~V~~lI~~~~VvVYsk~~CPyC~~Ak~~LL~~~gV------~y~eidVlEld~~~~-~~e~~~~L~~~tG~~TVPqV-FI 324 (362)
T 2jad_A 253 HVKDLIAENEIFVASKTYCPYSHAALNTLFEKLKV------PRSKVLVLQLNDMKE-GADIQAALYEINGQRTVPNI-YI 324 (362)
T ss_dssp HHHHHHHTCSEEEEECTTCHHHHHHHHHHHTTTCC------CTTTEEEEEGGGSTT-HHHHHHHHHHHHCCCSSCEE-EE
T ss_pred HHHHHhccCCEEEEEcCCCcchHHHHHHHHHHcCC------CcceEEEEEeccccC-CHHHHHHHHHHHCCCCcCEE-EE
Confidence 4455555665443 358999999854322332221 2322222 3232222 22333444556788889975 44
Q ss_pred CCCCcee
Q 005023 83 SPDLKPL 89 (718)
Q Consensus 83 ~p~g~p~ 89 (718)
+|+.+
T Consensus 325 --~Gk~I 329 (362)
T 2jad_A 325 --NGKHI 329 (362)
T ss_dssp --TTEEE
T ss_pred --CCEEE
Confidence 56665
No 315
>1wzz_A Probable endoglucanase; glycoside hydrolase family 8 (GH-8), (alpha/alpha)6 barrel, structural genomics; 1.65A {Gluconacetobacter xylinus} SCOP: a.102.1.2
Probab=75.84 E-value=6.4 Score=41.73 Aligned_cols=97 Identities=13% Similarity=0.098 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEe-ecCCCCCCC-C--CcccH
Q 005023 419 GLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHS-FRNGPSKAP-G--FLDDY 494 (718)
Q Consensus 419 gl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~-~~~g~~~~~-~--~l~Dy 494 (718)
-.++.||.+|++.-++ ++|.+.|+++++-|.++...+..|.+.-. ...|-.... - .+.++
T Consensus 109 l~IA~ALl~A~~~Wg~----------------~~Y~~~A~~il~~i~~~~v~~~~g~~~llPg~~gf~~~~~~~~npSY~ 172 (334)
T 1wzz_A 109 LLIALALGRAGKRFQR----------------PDYIQDAMAIYGDVLNLMTMKAGPYVVLMPGAVGFTKKDSVILNLSYY 172 (334)
T ss_dssp HHHHHHHHHHHHHHTC----------------HHHHHHHHHHHHHHHHHHEEEETTEEEECSCSSSCBCSSEEEECGGGC
T ss_pred HHHHHHHHHHHHHhCC----------------HHHHHHHHHHHHHHHHhcccCCCCeEEECCCcccccCCCCCeechhhc
Confidence 4788999999999987 78999999999999887765444543311 111111100 0 12222
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcccccCC
Q 005023 495 AFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDREGG 534 (718)
Q Consensus 495 A~li~all~LYeaTgd~~~L~~A~~L~~~~~~~F~D~~~G 534 (718)
+..++-.+++.+++..|.+.+....+.+.+... +.+|
T Consensus 173 --~p~~~~~fa~~~~~~~W~~~~~~~~~ll~~~~~-~~tG 209 (334)
T 1wzz_A 173 --VMPSLLQAFDLTADPRWRQVMEDGIRLVSAGRF-GQWR 209 (334)
T ss_dssp --CHHHHHHHHHHHCCTHHHHHHHHHHHHHHHSCB-TTTT
T ss_pred --CHHHHHHHHHccCCchHHHHHHHHHHHHHHccc-CCCC
Confidence 225666677889999999999988888766543 4444
No 316
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=75.65 E-value=2.1 Score=39.94 Aligned_cols=36 Identities=17% Similarity=0.216 Sum_probs=21.7
Q ss_pred CCcEEEeCCCCceeecccccCCCCCCCcccHHHHHHHHH
Q 005023 76 WPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRKVK 114 (718)
Q Consensus 76 wP~~vfl~p~g~p~~~~~y~p~~~~~~~~~f~~~L~~i~ 114 (718)
.|++++++++|+..+.... + +....+...++++.|.
T Consensus 133 ~p~~~liD~~G~i~~~~~~-~--~~~~~~~~~~ll~~l~ 168 (171)
T 2yzh_A 133 ARAVFIIDKEGKVAYVQLV-P--EITEEPNYDEVVNKVK 168 (171)
T ss_dssp CCEEEEECTTSBEEEEEEC-S--BTTSCCCCHHHHHHHH
T ss_pred eeEEEEEcCCCeEEEEEeC-C--CcCCCCCHHHHHHHHH
Confidence 6999999999998864311 1 0012234556666554
No 317
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=75.56 E-value=23 Score=41.52 Aligned_cols=157 Identities=13% Similarity=0.040 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccC--C----------CeEEEeecCCCCC
Q 005023 419 GLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQ--T----------HRLQHSFRNGPSK 486 (718)
Q Consensus 419 gl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~--~----------g~l~~~~~~g~~~ 486 (718)
++++.||.+++. ..+ +++.+..+++.+||.+...... + |+.-.++.+ .
T Consensus 390 alal~AL~~ag~-~~~----------------~~~~~~l~ka~~~L~~~Q~~~~~~d~~~~~r~~~~GGW~f~~~~---~ 449 (732)
T 1w6k_A 390 AFAIQALLEAGG-HHR----------------PEFSSCLQKAHEFLRLSQVPDNPPDYQKYYRQMRKGGFSFSTLD---C 449 (732)
T ss_dssp HHHHHHHHHTTG-GGC----------------GGGHHHHHHHHHHHHHHSCCCCCTTGGGGTCCCCTTCCBSSCTT---T
T ss_pred HHHHHHHHHcCC-Ccc----------------hhhHHHHHHHHHHHHHhcccccCCcccccccCCCCCeecCCCCC---C
Confidence 788999999863 222 4677889999999987754321 1 222111111 1
Q ss_pred CCCCcccHHHHHHHHHHHHHHcC---ChHHHHHHHHHHHHHHHhcccccCCccccCCC-CCCcccc--cccc-----CCC
Q 005023 487 APGFLDDYAFLISGLLDLYEFGS---GTKWLVWAIELQNTQDELFLDREGGGYFNTTG-EDPSVLL--RVKE-----DHD 555 (718)
Q Consensus 487 ~~~~l~DyA~li~all~LYeaTg---d~~~L~~A~~L~~~~~~~F~D~~~Gg~f~t~~-~~~~l~~--r~k~-----~~D 555 (718)
.....++-|+++.+|..+....+ +....+...+..+.+...- . .+|+|-.... .....+. .+.+ ..|
T Consensus 450 ~~pd~d~TA~vl~aL~~~~~~~~~~g~~~~~~~i~~av~wLls~Q-~-~DGgw~a~~~~~~~~~l~~i~~~e~fg~~~~d 527 (732)
T 1w6k_A 450 GWIVSDCTAEALKAVLLLQEKCPHVTEHIPRERLCDAVAVLLNMR-N-PDGGFATYETKRGGHLLELLNPSEVFGDIMID 527 (732)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHCTTCCSCCCHHHHHHHHHHHHTTC-C-TTSCBCSSSCCCSCGGGGGGCCCSSCSSCSSC
T ss_pred CCCccccHHHHHHHHHHHhcccccccchhhHHHHHHHHHHHHHhc-C-CCCCEEeecCCCchHHHhhCcchhcccccccC
Confidence 22456778999999999987753 2333344444455555432 2 3577732111 1111110 0011 112
Q ss_pred CCCCChHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHH
Q 005023 556 GAEPSGNSVSVINLVRLASIVAGSKSDYYRQNAEHSLAVFET 597 (718)
Q Consensus 556 ~a~PS~ns~~a~~LlrL~~lt~~~~~~~y~e~a~~~l~~~~~ 597 (718)
...+..++..+.+|..+.........+.+....++.++.+..
T Consensus 528 ~s~v~~Ta~vL~aL~~~~~~~~~~~~~~~~~~i~rAv~yL~~ 569 (732)
T 1w6k_A 528 YTYVECTSAVMQALKYFHKRFPEHRAAEIRETLTQGLEFCRR 569 (732)
T ss_dssp CCBHHHHHHHHHHHHHHHHHCTTSSHHHHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHhccccccccchhhHHHHHHHHHHHHh
Confidence 223334555666666666543221112344555666666544
No 318
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum}
Probab=75.19 E-value=55 Score=36.13 Aligned_cols=118 Identities=16% Similarity=0.082 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHHHHHhccccCCCeEEEeecCC--------CCC-----CCC--------CcccHHHHHHHHHHHHHHcC
Q 005023 451 KEYMEVAESAASFIRRHLYDEQTHRLQHSFRNG--------PSK-----APG--------FLDDYAFLISGLLDLYEFGS 509 (718)
Q Consensus 451 ~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~~g--------~~~-----~~~--------~l~DyA~li~all~LYeaTg 509 (718)
++.|+.++-..+||++. ++..|.+++...+| .+. .+. -.+--+.++-+|...+.+..
T Consensus 112 ~d~ldeikwg~D~llk~--~~~~~~~y~qVgd~~~Dh~~W~~pe~~~~~R~~y~i~~~~pgsd~a~e~AAAlAaAS~vfk 189 (466)
T 2xfg_A 112 NHILNNIKWACDYFIKC--HPEKDVYYYQVGDGHADHAWWGPAEVMPMERPSYKVDRSSPGSTVVAETSAALAIASIIFK 189 (466)
T ss_dssp HHHHHHHHHHHHHHHHT--CSBTTEEEEEESCHHHHHTCCSCGGGCCSCCCEEEEESSSCCHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHh--ccCCCcEEEEeCCCCccccccCCcccCCCCCceeEecCCCCccHHHHHHHHHHHHHHHhcc
Confidence 78999999999999987 34467888875443 110 011 12223455666666666654
Q ss_pred --C----hHHHHHHHHHHHHHHHhccc---ccCCccccCCCCCCccccccccCCCCCCCChHHHHHHHHHHHHHHhCCCC
Q 005023 510 --G----TKWLVWAIELQNTQDELFLD---REGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAGSK 580 (718)
Q Consensus 510 --d----~~~L~~A~~L~~~~~~~F~D---~~~Gg~f~t~~~~~~l~~r~k~~~D~a~PS~ns~~a~~LlrL~~lt~~~~ 580 (718)
| .++|+.|+++++.+.++--. ...++||.+. -+-.-.++++-..|+..||+
T Consensus 190 ~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~~~~~~~~Y~s~------------------s~~~DEl~WAAawLy~ATgd-- 249 (466)
T 2xfg_A 190 KVDGEYSKECLKHAKELFEFADTTKSDDGYTAANGFYNSW------------------SGFYDELSWAAVWLYLATND-- 249 (466)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHCCCTTCCTTTTTSCCS------------------SCSHHHHHHHHHHHHHHHCC--
T ss_pred ccCHHHHHHHHHHHHHHHHHHHhcCCcCCCCccccccCCC------------------CCCchHHHHHHHHHHHHhCC--
Confidence 4 35678888888887765311 1112233220 01123567778889999996
Q ss_pred chHHHHHHHHH
Q 005023 581 SDYYRQNAEHS 591 (718)
Q Consensus 581 ~~~y~e~a~~~ 591 (718)
..|++.++..
T Consensus 250 -~~Yl~~a~~~ 259 (466)
T 2xfg_A 250 -SSYLDKAESY 259 (466)
T ss_dssp -HHHHHHHHHT
T ss_pred -HHHHHHHHHH
Confidence 8899988764
No 319
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=75.05 E-value=4.7 Score=38.36 Aligned_cols=16 Identities=6% Similarity=-0.219 Sum_probs=14.2
Q ss_pred CCcEEEeCCCCceeec
Q 005023 76 WPLSVFLSPDLKPLMG 91 (718)
Q Consensus 76 wP~~vfl~p~g~p~~~ 91 (718)
.|++++++++|+..+.
T Consensus 118 ~p~~~lID~~G~i~~~ 133 (186)
T 1n8j_A 118 DRATFVVDPQGIIQAI 133 (186)
T ss_dssp CEEEEEECTTSBEEEE
T ss_pred eeEEEEECCCCeEEEE
Confidence 6999999999998864
No 320
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=74.25 E-value=2.9 Score=45.51 Aligned_cols=41 Identities=15% Similarity=0.068 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHc-c--CChHHHHHHHHHHHHHHHhccCCCCce
Q 005023 254 QGQLANVYLDAFSL-T--KDVFYSYICRDILDYLRRDMIGPGGEI 295 (718)
Q Consensus 254 nA~ll~~ya~Ay~~-t--~~~~y~~~A~~~~~~l~~~m~~p~Ggf 295 (718)
-|..+.+++++|+. + +++.|++.+.+.++||+. |+.++||+
T Consensus 151 Ta~vl~aL~rv~~~~t~~~~~~y~~Ai~Rgl~wlL~-mQ~~nGGW 194 (408)
T 1r76_A 151 TVTEIRFLAQVVSQLAPEEAAPYRDAALKGIEYLLA-SQFPNGGW 194 (408)
T ss_dssp THHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHHH-HSCTTSCC
T ss_pred HHHHHHHHHHHHhhccccccHHHHHHHHHHHHHHHH-ccCCCCCC
Confidence 46788889999998 7 899999999999999998 99999997
No 321
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=73.72 E-value=62 Score=37.02 Aligned_cols=117 Identities=19% Similarity=0.157 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHHHHHhccccCCCeEEEeecCC--------CCCC-----CCC--------cccHHHHHHHHHHHHHHcC
Q 005023 451 KEYMEVAESAASFIRRHLYDEQTHRLQHSFRNG--------PSKA-----PGF--------LDDYAFLISGLLDLYEFGS 509 (718)
Q Consensus 451 ~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~~g--------~~~~-----~~~--------l~DyA~li~all~LYeaTg 509 (718)
++.|+.++-..+||++. ++..|.|++...+| .+.. +.+ .+--+.++-+|...+.+..
T Consensus 91 ~d~ldeikwg~Dyllk~--~~~~~~~y~qVGdg~~DH~~w~~pe~~~~~r~~y~v~~~~pgsd~a~e~AAAlAaAS~vfk 168 (614)
T 1g87_A 91 KYIMDGIKWANDYFIKC--NPTPGVYYYQVGDGGKDHSWWGPAEVMQMERPSFKVDASKPGSAVCASTAASLASAAVVFK 168 (614)
T ss_dssp HHHHHHHHHHHHHHHHT--CCSTTCEEEEESCHHHHHTCCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHh--ccCCCcEEEEecCCCcCccccCCcccCCCCCcceEecCCCCccHHHHHHHHHHHHHHHhcc
Confidence 78999999999999987 34457787654442 1100 101 1222445555555555554
Q ss_pred --C----hHHHHHHHHHHHHHHHhccc---ccCCccccCCCCCCccccccccCCCCCCCChHHHHHHHHHHHHHHhCCCC
Q 005023 510 --G----TKWLVWAIELQNTQDELFLD---REGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAGSK 580 (718)
Q Consensus 510 --d----~~~L~~A~~L~~~~~~~F~D---~~~Gg~f~t~~~~~~l~~r~k~~~D~a~PS~ns~~a~~LlrL~~lt~~~~ 580 (718)
| .++|+.|+++++.+.++--. ...++||... +-.-.++++-..|+..||+
T Consensus 169 ~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~~~~~~~~Y~ss-------------------~~~DEl~WAAawLy~ATgd-- 227 (614)
T 1g87_A 169 SSDPTYAEKCISHAKNLFDMADKAKSDAGYTAASGYYSSS-------------------SFYDDLSWAAVWLYLATND-- 227 (614)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHCCCTTCCTTTTTSCCS-------------------CSHHHHHHHHHHHHHHHCC--
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCcCCcCCC-------------------CchhHHHHHHHHHHHHhCC--
Confidence 4 45688888888888765311 0112233221 1123567778889999996
Q ss_pred chHHHHHHHHH
Q 005023 581 SDYYRQNAEHS 591 (718)
Q Consensus 581 ~~~y~e~a~~~ 591 (718)
..|++.+++.
T Consensus 228 -~~Yl~~a~~~ 237 (614)
T 1g87_A 228 -STYLDKAESY 237 (614)
T ss_dssp -HHHHHHHHHT
T ss_pred -HHHHHHHHHH
Confidence 8899998764
No 322
>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=73.71 E-value=18 Score=39.00 Aligned_cols=51 Identities=10% Similarity=-0.025 Sum_probs=37.4
Q ss_pred hhchHHHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEe
Q 005023 414 IVSWNGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHS 479 (718)
Q Consensus 414 lt~WNgl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~ 479 (718)
+++|-..+...|++.++++|+. ..+|.+.|.++.+.+.+ +|+++.|.++..
T Consensus 237 lna~~~~~~~~la~la~~lg~~--------------a~~~~~~a~~~~~ai~~-~Wd~~~g~~~d~ 287 (420)
T 2z07_A 237 FNAILQRANRDLYALAVLLQED--------------PYEIEEWIVRGEVGLEA-LWDREAGFYFSW 287 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCC--------------CHHHHHHHHHHHHHHHH-TEETTTTEECCE
T ss_pred HHHHHHHHHHHHHHHHHHhCcc--------------HHHHHHHHHHHHHHHHH-hhCcccCeeEee
Confidence 3444444455777778888762 27899999999999999 999877766543
No 323
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}
Probab=73.65 E-value=18 Score=43.68 Aligned_cols=113 Identities=17% Similarity=0.177 Sum_probs=71.5
Q ss_pred hhhchHHHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEE---eecCCCC----
Q 005023 413 VIVSWNGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQH---SFRNGPS---- 485 (718)
Q Consensus 413 ilt~WNgl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~---~~~~g~~---- 485 (718)
.+.+|..+.+.++.+.++.+||.... ++.....++.++|+.++. ++ +|.+.. .+.+...
T Consensus 625 ~~~~~~~~~i~~~~~yy~~tGD~~~L------------~e~yp~lk~~l~~~~~~~-d~-~GLl~~~~~~~~DW~d~~~~ 690 (956)
T 2okx_A 625 VIPNWTFFWILACREYAAHTGNEAFA------------ARIWPAVKHTLTHYLEHI-DD-SGLLNMAGWNLLDWAPIDQP 690 (956)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCHHHH------------HHHHHHHHHHHHHHHTTB-CT-TSSBCCSSCCCCCSSSCCCC
T ss_pred CCcChHHHHHHHHHHHHHHhCCHHHH------------HHHHHHHHHHHHHHHhcC-CC-CCCEEeCCCCccCccCCCCC
Confidence 45678888899999999999983211 344557778888887654 43 443321 1111110
Q ss_pred CCCCCcccHHHHH---HHHHHHHHHcCCh----HHHHHHHHHHHHHHHhcccccCCccccC
Q 005023 486 KAPGFLDDYAFLI---SGLLDLYEFGSGT----KWLVWAIELQNTQDELFLDREGGGYFNT 539 (718)
Q Consensus 486 ~~~~~l~DyA~li---~all~LYeaTgd~----~~L~~A~~L~~~~~~~F~D~~~Gg~f~t 539 (718)
.......+.+++. ..+.++.++.|++ +|.+.|.+|.+.+.++|||++.|.|.+.
T Consensus 691 ~~G~~~~~~a~~~~al~~~a~lA~~LG~~~~a~~y~~~A~~lk~ai~~~~wd~~~g~y~d~ 751 (956)
T 2okx_A 691 NEGIVTHQNLFLVKALRDSRALAAAAGATEEADAFAARADLLAETINAVLWDEEKRAYIDC 751 (956)
T ss_dssp SSSEEHHHHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHHHHHHSEETTTTEECSE
T ss_pred CCCcCHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEee
Confidence 0011233445444 4456667777764 4899999999999999999876655543
No 324
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=71.30 E-value=9.5 Score=40.03 Aligned_cols=73 Identities=8% Similarity=-0.052 Sum_probs=41.9
Q ss_pred CCcEEEeCCCCceeecccccCCCCCCCcccHHHHHHHHHHHHhhcHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCHH
Q 005023 76 WPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRKVKDAWDKKRDMLAQSGAFAIEQLSEALSASASSNKLPDELPQN 155 (718)
Q Consensus 76 wP~~vfl~p~g~p~~~~~y~p~~~~~~~~~f~~~L~~i~~~w~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (718)
.|+|+++||+|+....-.-+.+. .-..++|+.+.++= +.-..+.+.|+...+... =.+..++.+
T Consensus 102 ~r~tfiId~~G~i~~~~~~v~~~-----~h~~~~l~~~~~~~--------~~~~~~~~~I~~RRSiR~---F~~~~V~~e 165 (322)
T 4eo3_A 102 VRSTFLIDRWGFVRKEWRRVKVE-----GHVQEVKEALDRLI--------EEDLSLNKHIEWRRARRA---LKKDRVPRE 165 (322)
T ss_dssp CCEEEEECTTSBEEEEEESCCST-----THHHHHHHHHHHHH--------HHHTSCCHHHHHCCCCCC---BCCCCCCHH
T ss_pred ccEEEEECCCCEEEEEEeCCCcc-----ccHHHHHHHHhhhc--------hhhhHHHHHHHhhhccCC---cCccccCHH
Confidence 68999999999987532112222 15778888776652 122335556655443221 112346778
Q ss_pred HHHHHHHHH
Q 005023 156 ALRLCAEQL 164 (718)
Q Consensus 156 ~~~~~~~~l 164 (718)
.++++++.-
T Consensus 166 ~l~~ileaA 174 (322)
T 4eo3_A 166 ELELLIKAA 174 (322)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888777643
No 325
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=71.05 E-value=5.4 Score=39.89 Aligned_cols=18 Identities=0% Similarity=-0.404 Sum_probs=15.5
Q ss_pred CCCcEEEeCCCCceeecc
Q 005023 75 GWPLSVFLSPDLKPLMGG 92 (718)
Q Consensus 75 GwP~~vfl~p~g~p~~~~ 92 (718)
..|.+++++|+|+..+..
T Consensus 167 ~~p~~flID~~G~I~~~~ 184 (240)
T 3qpm_A 167 TLRGLFIIDEKGVLRQIT 184 (240)
T ss_dssp ECEEEEEECTTSBEEEEE
T ss_pred ccceEEEEcCCCeEEEEE
Confidence 479999999999998754
No 326
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*
Probab=70.18 E-value=63 Score=39.29 Aligned_cols=70 Identities=11% Similarity=-0.013 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHhccccCCCeEEEee-cCCCCCCC-CCcccHHHHHHHHHHHHHHcCChHHHH-HHHHHHHHHHHh
Q 005023 455 EVAESAASFIRRHLYDEQTHRLQHSF-RNGPSKAP-GFLDDYAFLISGLLDLYEFGSGTKWLV-WAIELQNTQDEL 527 (718)
Q Consensus 455 ~~A~~~~~~l~~~~~d~~~g~l~~~~-~~g~~~~~-~~l~DyA~li~all~LYeaTgd~~~L~-~A~~L~~~~~~~ 527 (718)
+.|++..+||.+.... .+|.+.+.| .+|++... ..+|-++..+.++..+++ + |..... ..+.+++.+.++
T Consensus 348 e~A~~~l~~L~~~Q~~-~~G~~~~~y~i~G~~~w~~~Q~D~~g~~l~~~~~~~~-~-d~~~w~~~v~~al~~i~~~ 420 (1020)
T 1ulv_A 348 EAAARGVEWLFTYQQQ-PDGHFPQTSRVDGTIGQNGIQLDETAFPILLANQIGR-T-DAGFYRNELKPAADYLVAA 420 (1020)
T ss_dssp HHHHHHHHHHHHHTCC-TTSCCCSCBCTTSCBCCCCCBTHHHHHHHHHHHHHTC-C-CHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcC-CCCCeeeEEecCCCcCCCCccCccchHHHHHHHHHHh-c-CHHHHHHHHHHHHHHHHHh
Confidence 5678888888876523 257787775 46654333 266888999998888765 4 444444 677777777665
No 327
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}
Probab=69.25 E-value=16 Score=42.68 Aligned_cols=111 Identities=7% Similarity=0.075 Sum_probs=70.6
Q ss_pred hhchHHHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEe--------ecCCCC
Q 005023 414 IVSWNGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHS--------FRNGPS 485 (718)
Q Consensus 414 lt~WNgl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~--------~~~g~~ 485 (718)
+.++..+.+.++.+.++.+||.... ++.....++.++|+.++. ++ +|.+... |.++..
T Consensus 382 ~~d~~l~wi~~~~~yy~~tGD~~~L------------~e~~p~l~~~ld~~~~~~-d~-~GL~~~~~G~W~~~dW~d~~~ 447 (739)
T 3cih_A 382 IMDYTFYWFLSVYDYYMYSGDRHFV------------NQLYPRMQTMMDYVLGRT-NK-NGMVEGMSGDWVFVDWADGYL 447 (739)
T ss_dssp BHHHHHHHHHHHHHHHHHHCCHHHH------------HHHHHHHHHHHHHHHTTB-CT-TSCBCCCTTCBCCSCCCTTCC
T ss_pred ccchhHHHHHHHHHHHHHhCCHHHH------------HHHHHHHHHHHHHHHHhc-CC-CCCcccCCCCcccCCCccccc
Confidence 4567778888999999999983211 345567788888887754 32 3432211 111100
Q ss_pred CCCC-CcccHHHHH---HHHHHHHHHcCCh----HHHHHHHHHHHHHHHhcccccCCcccc
Q 005023 486 KAPG-FLDDYAFLI---SGLLDLYEFGSGT----KWLVWAIELQNTQDELFLDREGGGYFN 538 (718)
Q Consensus 486 ~~~~-~l~DyA~li---~all~LYeaTgd~----~~L~~A~~L~~~~~~~F~D~~~Gg~f~ 538 (718)
...+ ..+..|++. ..+.++.++.|++ +|.+.|.+|-+.+.++|||++.|.|+.
T Consensus 448 ~~~G~~~~~~a~~y~al~~~a~lA~~lG~~~~A~~y~~~A~~lk~a~~~~~wd~~~G~y~~ 508 (739)
T 3cih_A 448 DKKGELSFEQVLFCRSLETMALCADLVGDKDGQQKYEKLASALKAKLEPTFWNNQKQAFVH 508 (739)
T ss_dssp CCSSEEHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHEETTTTEECS
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhccCcccCeeEe
Confidence 1112 123345544 4445667777874 588999999999999999988776664
No 328
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=69.18 E-value=4.7 Score=39.36 Aligned_cols=18 Identities=0% Similarity=-0.415 Sum_probs=15.7
Q ss_pred CCCcEEEeCCCCceeecc
Q 005023 75 GWPLSVFLSPDLKPLMGG 92 (718)
Q Consensus 75 GwP~~vfl~p~g~p~~~~ 92 (718)
++|.+++++++|+..+..
T Consensus 138 ~~p~~~lID~~G~I~~~~ 155 (211)
T 2pn8_A 138 TLRGLFIIDDKGILRQIT 155 (211)
T ss_dssp ECEEEEEECTTSBEEEEE
T ss_pred ccceEEEECCCCEEEEEE
Confidence 589999999999998754
No 329
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=67.91 E-value=3.5 Score=39.93 Aligned_cols=34 Identities=12% Similarity=0.056 Sum_probs=23.0
Q ss_pred CCcEEEeCCCCceeecc-cccCCCCCCCcccHHHHHHHH
Q 005023 76 WPLSVFLSPDLKPLMGG-TYFPPEDKYGRPGFKTILRKV 113 (718)
Q Consensus 76 wP~~vfl~p~g~p~~~~-~y~p~~~~~~~~~f~~~L~~i 113 (718)
.|++++++++|+..+.. ++-+ ...+.+.++|+.+
T Consensus 165 ~p~~~lID~~G~I~~~~~~~~~----~~~~~~~~~l~~L 199 (200)
T 3zrd_A 165 ARAVVVLDGQDNVIYSELVNEI----TTEPNYDAALAAL 199 (200)
T ss_dssp CCEEEEECTTSBEEEEEECSBT----TSCCCHHHHHHHH
T ss_pred ccEEEEECCCCeEEEEEecCCc----ccCCCHHHHHHhh
Confidence 59999999999998643 2211 1234677777654
No 330
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=67.80 E-value=7.5 Score=44.06 Aligned_cols=73 Identities=14% Similarity=0.150 Sum_probs=42.0
Q ss_pred hHHhhhhhcCCcE-EEEcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEe
Q 005023 4 RSFCGGTKTRRTH-FLINTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFL 82 (718)
Q Consensus 4 ~a~~~Ak~e~K~i-i~y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl 82 (718)
+.+++..++++.+ +..+||++|+.+.+ ..+.++-.|..|.||.++ + +..++..++.++|...+|.. |+
T Consensus 9 ~~v~~~i~~~~v~vy~~~~Cp~C~~~k~-------~L~~~~i~~~~~dv~~~~--~-~~~~~~~l~~~~g~~tvP~v-~i 77 (598)
T 2x8g_A 9 QWLRKTVDSAAVILFSKTTCPYCKKVKD-------VLAEAKIKHATIELDQLS--N-GSAIQKCLASFSKIETVPQM-FV 77 (598)
T ss_dssp HHHHHHHHHCSEEEEECTTCHHHHHHHH-------HHHHTTCCCEEEEGGGST--T-HHHHHHHTHHHHSCCCSCEE-EE
T ss_pred HHHHHHhccCCEEEEECCCChhHHHHHH-------HHHHCCCCcEEEEcccCc--c-hHHHHHHHHHHhCCceeCEE-EE
Confidence 4566666666654 34599999997552 122233346655555433 2 23334444555788889976 43
Q ss_pred CCCCcee
Q 005023 83 SPDLKPL 89 (718)
Q Consensus 83 ~p~g~p~ 89 (718)
+|+.+
T Consensus 78 --~g~~i 82 (598)
T 2x8g_A 78 --RGKFI 82 (598)
T ss_dssp --TTEEE
T ss_pred --CCEEE
Confidence 45555
No 331
>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A*
Probab=67.39 E-value=24 Score=39.64 Aligned_cols=94 Identities=20% Similarity=0.250 Sum_probs=55.6
Q ss_pred hchHHHHHH---HHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEe-ecCCCCCCCCC
Q 005023 415 VSWNGLVIS---SFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHS-FRNGPSKAPGF 490 (718)
Q Consensus 415 t~WNgl~I~---ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~-~~~g~~~~~~~ 490 (718)
++-||+|.. .|++.++.+|+... ..+|.+.|.++.+.+.+.||+++.|.++.. ..+|+......
T Consensus 305 VDlnA~ly~a~~~la~lA~~lG~~~~------------a~~~~~~A~~lk~ai~~~fWdee~G~y~D~~~~~~~~~~~~~ 372 (535)
T 2jg0_A 305 VDLNSLMFKMEKILARASKAAGDNAM------------ANQYETLANARQKGIEKYLWNDQQGWYADYDLKSHKVRNQLT 372 (535)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHH------------HHHHHHHHHHHHHHHHHHSEETTTTEECCEETTTTEECCCCB
T ss_pred hHHHHHHHHHHHHHHHHHHHhCChHH------------HHHHHHHHHHHHHHHHHhCcCCCCCEEEEEeCCCCCEeeeeh
Confidence 445666655 55667777876311 157999999999999999999887766532 23333211111
Q ss_pred cccHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhccc
Q 005023 491 LDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLD 530 (718)
Q Consensus 491 l~DyA~li~all~LYeaTgd~~~L~~A~~L~~~~~~~F~D 530 (718)
. .+++-|+----++ ++|..+.+.+.+.|+.
T Consensus 373 ~-------s~~~PL~~gi~~~---e~a~~v~~~l~~~l~t 402 (535)
T 2jg0_A 373 A-------AALFPLYVNAAAK---DRANKMATATKTHLLQ 402 (535)
T ss_dssp G-------GGGHHHHTTCSCH---HHHHHHHHHHHHHTEE
T ss_pred h-------hhHHHHhcCCCCH---HHHHHHHHHHHHHhcc
Confidence 1 1122222111122 3677888888778875
No 332
>1v5d_A Chitosanase; chitosan degradation, hydrolase, glycosil hydrolase, family 8; HET: PIN; 1.50A {Bacillus SP} SCOP: a.102.1.2 PDB: 1v5c_A*
Probab=67.30 E-value=30 Score=37.23 Aligned_cols=128 Identities=8% Similarity=-0.036 Sum_probs=77.6
Q ss_pred HHHHHHHHHhccccCCCeEEEeecC-CCC--CCCCCcccHHHHHHHHHHHHHHcCCh---HHHHHHHHHHHHHHHhcccc
Q 005023 458 ESAASFIRRHLYDEQTHRLQHSFRN-GPS--KAPGFLDDYAFLISGLLDLYEFGSGT---KWLVWAIELQNTQDELFLDR 531 (718)
Q Consensus 458 ~~~~~~l~~~~~d~~~g~l~~~~~~-g~~--~~~~~l~DyA~li~all~LYeaTgd~---~~L~~A~~L~~~~~~~F~D~ 531 (718)
.++..|.++|+..+.+|.+-+.+.. |.. ....=.++=-+++.||+...+..++. .|+..|.+|++.+.++-...
T Consensus 98 D~l~~wt~~~l~~~~~~L~aW~~~~~g~~~~d~n~AtDgDl~IA~ALl~A~~~Wg~~g~~~Y~~~A~~il~~i~~~~~~~ 177 (386)
T 1v5d_A 98 DGLFKTARTFKSSQNPNLMGWVVADSKKAQGHFDSATDGDLDIAYSLLLAHKQWGSNGTVNYLKEAQDMITKGIKASNVT 177 (386)
T ss_dssp HHHHHHHHHTBCSSCTTSBCSEECSSGGGTTTSCCCHHHHHHHHHHHHHHHHHHCSSSSSCHHHHHHHHHHHTHHHHHBC
T ss_pred HHHHHHHHHHhccCCCCCeEEEECCCCCcCCCCCCCCHHHHHHHHHHHHHHHHcCCCchHhHHHHHHHHHHHHHHhcccC
Confidence 4567777778764445655555532 221 12233555678999999999999998 89999999999888775543
Q ss_pred cCCccccCCCCCCccccccccCCCCCCCChHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHH
Q 005023 532 EGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAGSKSDYYRQNAEHSLAVFETR 598 (718)
Q Consensus 532 ~~Gg~f~t~~~~~~l~~r~k~~~D~a~PS~ns~~a~~LlrL~~lt~~~~~~~y~e~a~~~l~~~~~~ 598 (718)
.++..-..+.. +...+...||= .+...|-.+++++++ ..|.+.++..++.+...
T Consensus 178 ~~~~l~~g~~~--------~~~~~~~npSY--~~p~~l~~f~~~~~~---~~W~~v~~~~~~~l~~~ 231 (386)
T 1v5d_A 178 NNNQLNLGDWD--------SKSSLDTRPSD--WMMSHLRAFYEFTGD---KTWLTVINNLYDVYTQF 231 (386)
T ss_dssp TTSSBCSSTTS--------CTTCCCBCGGG--CCHHHHHHHHHHHCC---THHHHHHHHHHHHHHHH
T ss_pred CCCeeeecccC--------CCCCCeechhh--ccHHHHHHHHHhcCC---CcHHHHHHHHHHHHHHH
Confidence 33221111100 01111222331 233456677888875 56888887777765443
No 333
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum}
Probab=67.30 E-value=64 Score=36.87 Aligned_cols=124 Identities=12% Similarity=-0.010 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHHHHhc---cccCCCeEEEeecCC--------CCC---CCC--C--------cccHHHHHHHHHHHHH
Q 005023 451 KEYMEVAESAASFIRRHL---YDEQTHRLQHSFRNG--------PSK---APG--F--------LDDYAFLISGLLDLYE 506 (718)
Q Consensus 451 ~~~l~~A~~~~~~l~~~~---~d~~~g~l~~~~~~g--------~~~---~~~--~--------l~DyA~li~all~LYe 506 (718)
++.|+.++-..+||++.- .++..|.+++...+| .|. ..+ + .+--+.++-+|...+.
T Consensus 152 ~d~ldeikwg~Dyllkmq~~~~~~~~g~~y~qVgdg~~Dh~~w~~Pe~~~~~R~~y~v~~~~pgsd~a~~~AAAlAaAS~ 231 (611)
T 2yik_A 152 VHAEVILRYFNDYFMRCTFRDASGNVVAFCHQVGDGDIDHAFWGAPENDTMFRRGWFITKEKPGTDIISATAASLAINYM 231 (611)
T ss_dssp HHHHHHHHHHHHHHHHTEEECTTSCEEEEEEEESCHHHHTTCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHcccccccCCCCcEEEEeCCCCccccCCCChhhCCCCCcceeecCCCCccHHHHHHHHHHHHHHH
Confidence 789999999999999852 144457888765442 110 001 0 1112445555555555
Q ss_pred HcC--Ch----HHHHHHHHHHHHHHHhcccccCCccccCCCCCCccccccccCCCCCCCChHHHHHHHHHHHHHHhCCCC
Q 005023 507 FGS--GT----KWLVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAGSK 580 (718)
Q Consensus 507 aTg--d~----~~L~~A~~L~~~~~~~F~D~~~Gg~f~t~~~~~~l~~r~k~~~D~a~PS~ns~~a~~LlrL~~lt~~~~ 580 (718)
+.. |+ ++|+.|+++++.+.++ .|.|...... ....|.. -+-.-..+++-..|+..||+
T Consensus 232 vfk~~D~~yA~~~L~~Ak~~~~fA~~~-----~~~y~~~~~~-------~~~~Y~s--s~~~DEl~WAAawLy~ATgd-- 295 (611)
T 2yik_A 232 NFKDTDPQYAAKSLDYAKALFDFAEKN-----PKGVVQGEDG-------PKGYYGS--SKWQDDYCWAAAWLYLATQN-- 295 (611)
T ss_dssp HHTTTCHHHHHHHHHHHHHHHHHHHHS-----CCCCCCGGGT-------TTTTSCC--CCSHHHHHHHHHHHHHHHCC--
T ss_pred hccccCHHHHHHHHHHHHHHHHHHHHc-----CCcccCCCcc-------cCcCCCC--CCcccHHHHHHHHHHHHhCC--
Confidence 553 44 5678888888777653 2223111000 0011111 11223567788889999996
Q ss_pred chHHHHHHHHH
Q 005023 581 SDYYRQNAEHS 591 (718)
Q Consensus 581 ~~~y~e~a~~~ 591 (718)
..|++.+++.
T Consensus 296 -~~Yl~~a~~~ 305 (611)
T 2yik_A 296 -EHYLDEAFKY 305 (611)
T ss_dssp -HHHHHHHHHH
T ss_pred -HHHHHHHHHH
Confidence 7899988654
No 334
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A*
Probab=64.74 E-value=58 Score=37.18 Aligned_cols=80 Identities=15% Similarity=0.085 Sum_probs=51.9
Q ss_pred CHHHHHHHHHHHHHHHhCCCcccCC------CcEEEEecCCCCC----CCCCcch--------HHHHHHHHHHHHHHHHc
Q 005023 206 ASEGQKMVLFTLQCMAKGGIHDHVG------GGFHRYSVDERWH----VPHFEKM--------LYDQGQLANVYLDAFSL 267 (718)
Q Consensus 206 ~~~~~~~~~~TL~~m~~gGi~D~v~------GGF~RYsvD~~W~----vPHFEKm--------LyDnA~ll~~ya~Ay~~ 267 (718)
-+++++.+..-++-|.+ .++.-+ |+++--.+|..|- .|.-..| .---+..+.+++.|+++
T Consensus 226 ~~d~ldeikwg~D~llk--~q~~~g~~~~~~g~v~~~~~D~~w~g~~~~Pe~~~~~R~~~~p~t~~~~~~AAalAaas~v 303 (609)
T 1ut9_A 226 YPDILDEARWEIEFFKK--MQVTEKEDPSIAGMVHHKIHDFRWTALGMLPHEDPQPRYLRPVSTAATLNFAATLAQSARL 303 (609)
T ss_dssp SCHHHHHHHHHHHHHHH--HBCCTTTCGGGTTCEECEEEESSCCCSSCCGGGCCSBEEECCEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH--hccCCCCcceEEEEecCCCCCcccCCCCCChhhCCCceeecCCCcHHHHHHHHHHHHHHHh
Confidence 46888888888888877 444322 5555455677784 3322111 11235567778899999
Q ss_pred cCC--h----HHHHHHHHHHHHHHHh
Q 005023 268 TKD--V----FYSYICRDILDYLRRD 287 (718)
Q Consensus 268 t~~--~----~y~~~A~~~~~~l~~~ 287 (718)
.++ + .+++.|++..+|..++
T Consensus 304 fk~~d~~ya~~~L~~A~~~~~fa~~~ 329 (609)
T 1ut9_A 304 WKDYDPTFAADCLEKAEIAWQAALKH 329 (609)
T ss_dssp HTTTCHHHHHHHHHHHHHHHHHHHHC
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHhC
Confidence 864 4 4667888899998873
No 335
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A*
Probab=62.97 E-value=33 Score=40.33 Aligned_cols=115 Identities=12% Similarity=0.059 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEeecCCCC-CC--C-CCcccH
Q 005023 419 GLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPS-KA--P-GFLDDY 494 (718)
Q Consensus 419 gl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~~g~~-~~--~-~~l~Dy 494 (718)
.+.+.++.+.++.+||.....+.+..+.+ +.....+..+++++|+.+++ ++ +|.+.....|... .. . ...+-.
T Consensus 429 lw~~~~~~~y~~~tGD~~~L~e~~p~~~~-~~~~v~e~~~~~~~~~~~~~-~~-~GL~~~~~~DW~D~~~~~~g~~v~~~ 505 (807)
T 1v7w_A 429 LWLIPTICKYVMETGETSFFDQMIPYADG-GEASVYEHMKAALDFSAEYV-GQ-TGICKGLRADWNDCLNLGGGESSMVS 505 (807)
T ss_dssp GGHHHHHHHHHHHHCCGGGGGCEEECTTS-CEEEHHHHHHHHHHHHHHSB-CT-TSCBEEETCSSSTTCCCEEEEEHHHH
T ss_pred hHHHHHHHHHHHHhCCHHHHhcccccccC-CcchHHHHHHHHHHHHHhcC-CC-CCCcccCCCCCCCcCCCCCCeehhHH
Confidence 56788999999999985333221100000 00122446888899988764 44 5654432222210 00 1 112233
Q ss_pred HHH---HHHHHHHHHHcCCh----HHHHHHHHHHHHHHHhcccccCCccc
Q 005023 495 AFL---ISGLLDLYEFGSGT----KWLVWAIELQNTQDELFLDREGGGYF 537 (718)
Q Consensus 495 A~l---i~all~LYeaTgd~----~~L~~A~~L~~~~~~~F~D~~~Gg~f 537 (718)
|++ +..+.++.+..|++ .|.+.|.+|.+.+.++|||++ |+||
T Consensus 506 a~~y~al~~~a~la~~lG~~~~a~~~~~~A~~lk~~~~~~~w~~~-~~~f 554 (807)
T 1v7w_A 506 FLHFWALQEFIDLAKFLGKDQDVNTYTEMAANVREACETHLWDDE-GGWY 554 (807)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHSEETT-TTEE
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhccCCC-CCee
Confidence 444 44455677777774 588999999999999999976 4444
No 336
>1v5d_A Chitosanase; chitosan degradation, hydrolase, glycosil hydrolase, family 8; HET: PIN; 1.50A {Bacillus SP} SCOP: a.102.1.2 PDB: 1v5c_A*
Probab=62.97 E-value=11 Score=40.72 Aligned_cols=94 Identities=19% Similarity=0.194 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEeecCCCCCCCCCcccHHHHH
Q 005023 419 GLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPSKAPGFLDDYAFLI 498 (718)
Q Consensus 419 gl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~~g~~~~~~~l~DyA~li 498 (718)
-.++.||.+|++.-++. | ..+|...|+++++-|.++...+.++.+. ..+......-++..-=+..
T Consensus 138 l~IA~ALl~A~~~Wg~~-----------g--~~~Y~~~A~~il~~i~~~~~~~~~~~l~--~g~~~~~~~~~~npSY~~p 202 (386)
T 1v5d_A 138 LDIAYSLLLAHKQWGSN-----------G--TVNYLKEAQDMITKGIKASNVTNNNQLN--LGDWDSKSSLDTRPSDWMM 202 (386)
T ss_dssp HHHHHHHHHHHHHHCSS-----------S--SSCHHHHHHHHHHHTHHHHHBCTTSSBC--SSTTSCTTCCCBCGGGCCH
T ss_pred HHHHHHHHHHHHHcCCC-----------c--hHhHHHHHHHHHHHHHHhcccCCCCeee--ecccCCCCCCeechhhccH
Confidence 47889999999999871 0 0279999999999998876654444332 1111100111122112334
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHHh
Q 005023 499 SGLLDLYEFGSGTKWLVWAIELQNTQDEL 527 (718)
Q Consensus 499 ~all~LYeaTgd~~~L~~A~~L~~~~~~~ 527 (718)
.++-.+|+++++..|.+.+....+.+.+.
T Consensus 203 ~~l~~f~~~~~~~~W~~v~~~~~~~l~~~ 231 (386)
T 1v5d_A 203 SHLRAFYEFTGDKTWLTVINNLYDVYTQF 231 (386)
T ss_dssp HHHHHHHHHHCCTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 55666788899999999988777775443
No 337
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}
Probab=61.14 E-value=1.9e+02 Score=34.74 Aligned_cols=135 Identities=14% Similarity=0.154 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHhccccCCCeEEEeecCCCCCCCCCcccH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcc---c
Q 005023 455 EVAESAASFIRRHLYDEQTHRLQHSFRNGPSKAPGFLDDY-AFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFL---D 530 (718)
Q Consensus 455 ~~A~~~~~~l~~~~~d~~~g~l~~~~~~g~~~~~~~l~Dy-A~li~all~LYeaTgd~~~L~~A~~L~~~~~~~F~---D 530 (718)
+.+++.++.+.+... .+|.+.+...++. .....|+ .+++.++.++|+.|||.++|+..-..++...+.+. |
T Consensus 595 ~lar~~L~~l~~~Q~--~dG~ip~~~p~~~---~~~~~~~~~~~i~~~~~yy~~tGD~~~L~e~yp~lk~~l~~~~~~~d 669 (956)
T 2okx_A 595 EIVERCLNLVPGSAD--ETPLYLDQVPSAW---SSVIPNWTFFWILACREYAAHTGNEAFAARIWPAVKHTLTHYLEHID 669 (956)
T ss_dssp HHHHHHHHHGGGGTT--TCTTCCSBSSCSS---CCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHHHHHHHHhhcc--cCCCcCccccccc---cCCCcChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 445555555554432 2465554332211 1234566 47889999999999999999876655555555443 3
Q ss_pred ccCCccccCCCCCCccccccccC---CCCCCCChHHHHHH---HHHHHHHHhCCCC-chHHHHHHHHHHHHHHHHH
Q 005023 531 REGGGYFNTTGEDPSVLLRVKED---HDGAEPSGNSVSVI---NLVRLASIVAGSK-SDYYRQNAEHSLAVFETRL 599 (718)
Q Consensus 531 ~~~Gg~f~t~~~~~~l~~r~k~~---~D~a~PS~ns~~a~---~LlrL~~lt~~~~-~~~y~e~a~~~l~~~~~~i 599 (718)
+ +| +..... ... ..+.+. .++.....|+.+.. .+.+|+++.|+.. ...|++.|+++-+.|....
T Consensus 670 ~-~G-Ll~~~~--~~~-~DW~d~~~~~~G~~~~~~a~~~~al~~~a~lA~~LG~~~~a~~y~~~A~~lk~ai~~~~ 740 (956)
T 2okx_A 670 D-SG-LLNMAG--WNL-LDWAPIDQPNEGIVTHQNLFLVKALRDSRALAAAAGATEEADAFAARADLLAETINAVL 740 (956)
T ss_dssp T-TS-SBCCSS--CCC-CCSSSCCCCSSSEEHHHHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHHHHHHS
T ss_pred C-CC-CEEeCC--CCc-cCccCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHh
Confidence 2 23 322210 000 001010 11111224554444 4566677777532 3569999998888876654
No 338
>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=60.38 E-value=28 Score=37.37 Aligned_cols=41 Identities=22% Similarity=0.276 Sum_probs=32.5
Q ss_pred HHHHHHHHHcCC--hHHHHHHHHHHHHHHHhcccccCCccccCC
Q 005023 499 SGLLDLYEFGSG--TKWLVWAIELQNTQDELFLDREGGGYFNTT 540 (718)
Q Consensus 499 ~all~LYeaTgd--~~~L~~A~~L~~~~~~~F~D~~~Gg~f~t~ 540 (718)
..+.++++..|+ .+|.+.|.++.+.+.+ |||++.|.||+..
T Consensus 246 ~~la~la~~lg~~a~~~~~~a~~~~~ai~~-~Wd~~~g~~~d~~ 288 (420)
T 2z07_A 246 RDLYALAVLLQEDPYEIEEWIVRGEVGLEA-LWDREAGFYFSWD 288 (420)
T ss_dssp HHHHHHHHHTTCCCHHHHHHHHHHHHHHHH-TEETTTTEECCEE
T ss_pred HHHHHHHHHhCccHHHHHHHHHHHHHHHHH-hhCcccCeeEeee
Confidence 344556666675 6899999999999999 9999888888654
No 339
>2h6f_B Protein farnesyltransferase beta subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.102.4.3 PDB: 1jcq_B* 1ld7_B* 1mzc_B* 1s63_B* 1sa4_B* 1tn6_B* 2f0y_B* 1ld8_B* 2iej_B* 3e37_B* 2h6h_B* 2h6g_B* 2h6i_B* 1o1t_B* 1o1s_B* 1o1r_B* 3eu5_B* 3pz4_B* 3e33_B* 1d8e_B* ...
Probab=59.80 E-value=14 Score=40.51 Aligned_cols=119 Identities=16% Similarity=0.121 Sum_probs=65.4
Q ss_pred HHHHHHHHHhcccccCCCCCCCCCCCChhHHHHHHHhhhhhcccCCCCCCHHHHHHHHHHHHHHHhCCCcccCCCcEEEE
Q 005023 157 LRLCAEQLSKSYDSRFGGFGSAPKFPRPVEIQMMLYHSKKLEDTGKSGEASEGQKMVLFTLQCMAKGGIHDHVGGGFHRY 236 (718)
Q Consensus 157 ~~~~~~~l~~~~D~~~GGfg~apKFP~~~~l~~Ll~~~~~~~~~~~~~~~~~~~~~~~~TL~~m~~gGi~D~v~GGF~RY 236 (718)
.++.++.+.+......|||+...+- .+..+.|.+.....-+. ..++..++-+...|..|.. -+|||.-|
T Consensus 75 ~~~hi~~l~~~lq~~~gg~~a~D~~-r~~l~y~~l~aL~lLg~----~~~~~~~~r~v~~l~s~Q~------~dGGf~g~ 143 (437)
T 2h6f_B 75 REKHFHYLKRGLRQLTDAYECLDAS-RPWLCYWILHSLELLDE----PIPQIVATDVCQFLELCQS------PEGGFGGG 143 (437)
T ss_dssp HHHHHHHHHHHTTEECGGGGGGTTC-HHHHHHHHHHHHHHTTC----CCCHHHHHHHHHHHHHHBC------TTSSBBSS
T ss_pred HHHHHHHHHHcCCCCCCCcccccCC-CccHHHHHHHHHHHhCC----CCCHHHHHHHHHHHHHhCC------CCCCcCCc
Confidence 3566777777656678999875443 23433333332222110 1123445555666666643 46999853
Q ss_pred ecCCCCCCCCCcchHHHHHHHHHHHHHHHHccCChH-HHH-HHHHHHHHHHHhccCCCCceeeec
Q 005023 237 SVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVF-YSY-ICRDILDYLRRDMIGPGGEIFSAE 299 (718)
Q Consensus 237 svD~~W~vPHFEKmLyDnA~ll~~ya~Ay~~t~~~~-y~~-~A~~~~~~l~~~m~~p~Ggf~sa~ 299 (718)
.|..+|.. --...+.+++ +.+... +.+ ..+++++||.+ ++.++|||+...
T Consensus 144 ----~~~~~~i~----~T~~Al~aL~----~lg~~~~~~~i~i~kav~~L~s-~Q~~DGsf~~~~ 195 (437)
T 2h6f_B 144 ----PGQYPHLA----PTYAAVNALC----IIGTEEAYDIINREKLLQYLYS-LKQPDGSFLMHV 195 (437)
T ss_dssp ----TTCCBCHH----HHHHHHHHHH----HHCCHHHHTTSCHHHHHHHHHT-TBCTTSCBBSST
T ss_pred ----cCCCcchh----HHHHHHHHHH----HhCCcccccchHHHHHHHHHHH-hCCCCCCeeecC
Confidence 47777643 2222222222 233321 111 26789999987 788999998653
No 340
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=59.78 E-value=1e+02 Score=35.15 Aligned_cols=92 Identities=11% Similarity=0.078 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEeecCCCCCCCCCcccHHHHH
Q 005023 419 GLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPSKAPGFLDDYAFLI 498 (718)
Q Consensus 419 gl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~~g~~~~~~~l~DyA~li 498 (718)
++++.||.+|.++...- |...+.|.+.|.++.++| +++|+++ |.+.+.+.++.. ...-+|- +.++
T Consensus 190 ~~~~~aL~~aa~lA~~~-----------g~~~~~w~~~ad~i~~~i-~~~w~~~-g~f~~~~~~~~~-~~~~lDa-s~LL 254 (599)
T 2vn4_A 190 ANQHRALVEGATLAATL-----------GQSGSAYSSVAPQVLCFL-QRFWVSS-GGYVDSNINTNE-GRTGKDV-NSVL 254 (599)
T ss_dssp HHHHHHHHHHHHHHHHH-----------TCCCHHHHHHHHHHHHHH-GGGEETT-TTEECSEESSCC-CCCCCBT-HHHH
T ss_pred HHHHHHHHHHHHHHHHc-----------CCCHHHHHHHHHHHHHHH-HhhcCCC-CCEEEEecCccC-CCCCcCH-HHHh
Confidence 55666776665543220 111278999999999999 8999976 777766533210 0111222 3332
Q ss_pred HHHHHHHHH----------cCChHHHHHHHHHHHHHHH
Q 005023 499 SGLLDLYEF----------GSGTKWLVWAIELQNTQDE 526 (718)
Q Consensus 499 ~all~LYea----------Tgd~~~L~~A~~L~~~~~~ 526 (718)
..+. -|.. -.|++.+.....+.+.+..
T Consensus 255 ~~~~-~f~~~~~~~~~~~~p~dpr~l~Tl~ai~~~L~~ 291 (599)
T 2vn4_A 255 TSIH-TFDPNLGCDAGTFQPCSDKALSNLKVVVDSFRS 291 (599)
T ss_dssp HHHH-SCCGGGTTCTTTTCTTSHHHHHHHHHHHHHHHT
T ss_pred hhhc-cCCccccccccCCCCCCHHHHHHHHHHHHHHHh
Confidence 2221 2211 1567787777777666653
No 341
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum}
Probab=59.42 E-value=65 Score=38.15 Aligned_cols=115 Identities=11% Similarity=-0.036 Sum_probs=65.5
Q ss_pred CCCchhhhchHHHHHHHHHHHHHHhhhhhhhhcccCCCCCCC--hHHHHHHHHHHHHHHHHhccccCCCeEEEe---ecC
Q 005023 408 HLDDKVIVSWNGLVISSFARASKILKSEAESAMFNFPVVGSD--RKEYMEVAESAASFIRRHLYDEQTHRLQHS---FRN 482 (718)
Q Consensus 408 ~~Ddkilt~WNgl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~--~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~---~~~ 482 (718)
+.|+- ...|.++.+..+.+||.....+-. |..... .....+..+++.+++.+++ ++ +|..... |.|
T Consensus 413 ~~D~~------lW~i~av~~Y~~~TGD~~~L~e~~-p~~~~~~~~~tl~eh~~ra~~~~~~~~-g~-~GL~~~g~~DWnD 483 (811)
T 3qde_A 413 FNDDP------LWLILATAAYIKETGDYSILKEQV-PFNNDPSKADTMFEHLTRSFYHVVNNL-GP-HGLPLIGRADWND 483 (811)
T ss_dssp BTTHH------HHHHHHHHHHHHHHCCGGGGGSEE-EETTEEEEEEEHHHHHHHHHHHHHTCB-CT-TSSBBCBTCSSST
T ss_pred cccch------hHHHHHHHHHHHHHCCHHHHHhhh-hhhcCCcccccHHHHHHHHHHHHHhcC-CC-CCCcccccCCchh
Confidence 55665 668899999999999843221000 000000 0024567788888888665 42 3432221 334
Q ss_pred CCCC--------C------C---CCc---cc---HHHHHHHHHHHHHHcCCh----HHHHHHHHHHHHHHHhcccc
Q 005023 483 GPSK--------A------P---GFL---DD---YAFLISGLLDLYEFGSGT----KWLVWAIELQNTQDELFLDR 531 (718)
Q Consensus 483 g~~~--------~------~---~~l---~D---yA~li~all~LYeaTgd~----~~L~~A~~L~~~~~~~F~D~ 531 (718)
+... . + +.- +- +...+..+.+|.+..|++ .|.+.|.+|.+.+.++|||.
T Consensus 484 ~ln~~~~~~~vg~~~~~vtp~~~~~gesv~~~al~y~AL~~~a~lA~~lGd~~~A~~~~~~A~~lk~a~~~~~Wdg 559 (811)
T 3qde_A 484 CLNLNCFSTVPDESFQTTTSKDGKVAESVMIAGMFVFIGKDYVKLCEYMGLEEEARKAQQHIDAMKEAILKYGYDG 559 (811)
T ss_dssp TCCSSCCCCCTTSCTTTSCCCCCSSCEEHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSBCS
T ss_pred hccccccccccCccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 3211 0 0 111 11 234455666777778874 58899999999999999973
No 342
>3a0o_A Oligo alginate lyase; alpha/alpha ballel+anti-parallel beta sheet; 2.11A {Agrobacterium tumefaciens} PDB: 3afl_A*
Probab=59.21 E-value=1.9e+02 Score=33.57 Aligned_cols=27 Identities=11% Similarity=-0.298 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHccCChHHHHHHHHHH
Q 005023 255 GQLANVYLDAFSLTKDVFYSYICRDIL 281 (718)
Q Consensus 255 A~ll~~ya~Ay~~t~~~~y~~~A~~~~ 281 (718)
...+..++-||++|+|..|.+.|++.+
T Consensus 209 ~~~l~~la~ay~ltgd~kya~~a~~~L 235 (776)
T 3a0o_A 209 IYAIRHLAIAGRVLGRDDLLDASRKWL 235 (776)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 677888999999999999987776643
No 343
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*
Probab=56.31 E-value=1.2e+02 Score=36.87 Aligned_cols=112 Identities=12% Similarity=0.024 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHhccccc-CCCCCCCCCCCChhH---------------------HHHHHHhhhhhcccCCCCCCHHHHH
Q 005023 154 QNALRLCAEQLSKSYDSR-FGGFGSAPKFPRPVE---------------------IQMMLYHSKKLEDTGKSGEASEGQK 211 (718)
Q Consensus 154 ~~~~~~~~~~l~~~~D~~-~GGfg~apKFP~~~~---------------------l~~Ll~~~~~~~~~~~~~~~~~~~~ 211 (718)
.+.+.+++..|+-.-+.. .||+=-+|-+|.|.. +..|+... . .+
T Consensus 283 ~~~~~rSl~~Lk~l~~~~t~GaiiAS~t~p~~e~~gg~rn~dgYry~W~RDaa~t~~all~~G-----------~---~e 348 (1020)
T 1ulv_A 283 RTQYDVSLMTVKSHEDKTFPGAFIASLTIPWGQAASAETHREGYHAVWARDMYQSVTALLAAG-----------D---EE 348 (1020)
T ss_dssp HHHHHHHHHHHHTTBCSSSTTCBCSCSSCTTGGGSBCSSCCCTTCSBCHHHHHHHHHHHHHHT-----------C---HH
T ss_pred HHHHHHHHHHHHHhcCCCCCCeEEEeCCCCcccccCCccCCCCCceEccchHHHHHHHHHHcC-----------C---HH
Confidence 345666666677666766 499988888776521 11222211 1 22
Q ss_pred HHHHHHHHHHhCCCc-ccCCCcEEEEecCCC--CCCCCCcchHHHHHHHHHHHHHHHHccCChHHHH-HHHHHHHHHHHh
Q 005023 212 MVLFTLQCMAKGGIH-DHVGGGFHRYSVDER--WHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSY-ICRDILDYLRRD 287 (718)
Q Consensus 212 ~~~~TL~~m~~gGi~-D~v~GGF~RYsvD~~--W~vPHFEKmLyDnA~ll~~ya~Ay~~t~~~~y~~-~A~~~~~~l~~~ 287 (718)
.+...|+-|++ +. ..-|.-.|+|.+|.. |.- .-+.-.++.|+++...++ ++ ..... .++.+++|+.+.
T Consensus 349 ~A~~~l~~L~~--~Q~~~~G~~~~~y~i~G~~~w~~----~Q~D~~g~~l~~~~~~~~-~d-~~~w~~~v~~al~~i~~~ 420 (1020)
T 1ulv_A 349 AAARGVEWLFT--YQQQPDGHFPQTSRVDGTIGQNG----IQLDETAFPILLANQIGR-TD-AGFYRNELKPAADYLVAA 420 (1020)
T ss_dssp HHHHHHHHHHH--HTCCTTSCCCSCBCTTSCBCCCC----CBTHHHHHHHHHHHHHTC-CC-HHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHH--HhcCCCCCeeeEEecCCCcCCCC----ccCccchHHHHHHHHHHh-cC-HHHHHHHHHHHHHHHHHh
Confidence 34444444443 11 111222456777643 432 233447888888777554 44 44444 899999999986
No 344
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A*
Probab=55.58 E-value=95 Score=36.79 Aligned_cols=59 Identities=20% Similarity=0.204 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHhccccCCCeEEEeec--CCCC--CC-CCCcccHHHHHHHHHHHHHHcCChHHHH
Q 005023 455 EVAESAASFIRRHLYDEQTHRLQHSFR--NGPS--KA-PGFLDDYAFLISGLLDLYEFGSGTKWLV 515 (718)
Q Consensus 455 ~~A~~~~~~l~~~~~d~~~g~l~~~~~--~g~~--~~-~~~l~DyA~li~all~LYeaTgd~~~L~ 515 (718)
+.|++...++..+... +|.+.|.+. .+.. .+ ..+.||..+++.++.+.++.|||..+|+
T Consensus 382 e~ar~~il~~~~~Q~~--dG~v~h~~~p~~~~g~~~~~~~~~D~~lWl~~av~~Yi~~TGD~~~L~ 445 (822)
T 3rrs_A 382 ERARERIIDIASTQFA--DGSAYHQYQPLTKRGNNDIGSGFNDDPLWLIAGTAAYIKETGDFSILD 445 (822)
T ss_dssp HHHHHHHHHHHTTCCT--TSCCCSEEETTTTEECTTTCSCBTTHHHHHHHHHHHHHHHHCCGGGGG
T ss_pred HHHHHHHHHHHHhhcc--cCcccceecCcCCCCccCCCCcccchHhHHHHHHHHHHHHHCCHHHHH
Confidence 3566666666666554 577877764 3321 11 4578899999999999999999999986
No 345
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=55.47 E-value=12 Score=33.70 Aligned_cols=40 Identities=10% Similarity=0.063 Sum_probs=23.5
Q ss_pred EcCCchhhhhhccccCcHHHHHHhhcccEEE-EecCCCCcchHHH
Q 005023 19 INTCHWCHVMEVESFEDEGVAKLLNDWFVSI-KVDREERPDVDKV 62 (718)
Q Consensus 19 y~~C~wChvM~~esf~d~~va~~ln~~Fv~v-kvD~ee~pd~d~~ 62 (718)
.++|+||++.++ -..+..+|+.+=|+. .+|.+..|+..+.
T Consensus 7 t~~c~~c~~kk~----c~~aK~lL~~kgV~feEidI~~d~~~r~e 47 (121)
T 1u6t_A 7 ASSSGSTAIKKK----QQDVLGFLEANKIGFEEKDIAANEENRKW 47 (121)
T ss_dssp CTTCSCHHHHHH----HHHHHHHHHHTTCCEEEEECTTCHHHHHH
T ss_pred cCCCCCccchHH----HHHHHHHHHHCCCceEEEECCCCHHHHHH
Confidence 489999986553 345667777554443 3455554444433
No 346
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=55.43 E-value=9.1 Score=35.80 Aligned_cols=15 Identities=13% Similarity=-0.157 Sum_probs=10.6
Q ss_pred CCcEEEeCCCCceeec
Q 005023 76 WPLSVFLSPDLKPLMG 91 (718)
Q Consensus 76 wP~~vfl~p~g~p~~~ 91 (718)
+|.++++ ++|+..+.
T Consensus 124 ~p~t~lI-~~G~I~~~ 138 (167)
T 2wfc_A 124 KRYSLVI-EDGVVTKV 138 (167)
T ss_dssp CCEEEEE-ETTEEEEE
T ss_pred eEEEEEE-eCCEEEEE
Confidence 4777777 77777754
No 347
>3ren_A Glycosyl hydrolase, family 8; (alpha/alpha)6-barrel fold, alpha-amylase; 2.00A {Clostridium perfringens}
Probab=55.36 E-value=14 Score=39.28 Aligned_cols=120 Identities=12% Similarity=0.071 Sum_probs=74.6
Q ss_pred HHHHHHHHHhccccCCCeEEEeecCCCCCCCCCcccHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhccccc-CCcc
Q 005023 458 ESAASFIRRHLYDEQTHRLQHSFRNGPSKAPGFLDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDRE-GGGY 536 (718)
Q Consensus 458 ~~~~~~l~~~~~d~~~g~l~~~~~~g~~~~~~~l~DyA~li~all~LYeaTgd~~~L~~A~~L~~~~~~~F~D~~-~Gg~ 536 (718)
.++.+|..+++. +++.+.+.+..+......-++|=-+.++||+...+..+++.|...|.+|.+.+..+-.... -..|
T Consensus 82 d~l~~~t~~~l~--~~~L~sWr~~~~~~~~nNAtdgDl~IA~ALl~A~~~W~~~~Y~~~A~~I~~~i~~~~~~~g~l~~~ 159 (350)
T 3ren_A 82 DEHFDIVKEMRL--KNGLISWRKEGDENSPSSATIDELRIIKALLLANNRWNSFYYKFYAINIANSLLKHAEENETLVDY 159 (350)
T ss_dssp HHHHHHHHTTBC--TTSSBCSEEETTEECSCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEETTEECSE
T ss_pred HHHHHHHHHHhc--cCCceEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHccccCcccCC
Confidence 567888899988 3676666654332212333455568899999999999999999999999999998755421 0123
Q ss_pred ccCCCCCCccccccccCCCCCCCChHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHH
Q 005023 537 FNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAGSKSDYYRQNAEHSLAVFET 597 (718)
Q Consensus 537 f~t~~~~~~l~~r~k~~~D~a~PS~ns~~a~~LlrL~~lt~~~~~~~y~e~a~~~l~~~~~ 597 (718)
|+.... ..+++ ||= ++..+|-.|+.++ ..+.+.+++.++.+..
T Consensus 160 ~d~~~~--~~~ln---------~SY--~~~~a~~~f~~~~-----~~W~~l~~~g~~lL~~ 202 (350)
T 3ren_A 160 IDNYGK--GNTTT---------LCY--LDLPTMKLLSQVD-----KKWEGIYEKSNSIIEN 202 (350)
T ss_dssp ECSSCB--CSEEE---------GGG--CCHHHHHHHHHHC-----THHHHHHHHHHHHHHT
T ss_pred CCccCC--CCEee---------hHh--cCHHHHHHHHHhc-----chHHHHHHHHHHHHHh
Confidence 332111 22222 221 2344555666653 3566666666666554
No 348
>3ren_A Glycosyl hydrolase, family 8; (alpha/alpha)6-barrel fold, alpha-amylase; 2.00A {Clostridium perfringens}
Probab=54.39 E-value=27 Score=37.16 Aligned_cols=86 Identities=14% Similarity=0.054 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEeecCCCCCCCCCcccHHHHH
Q 005023 419 GLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPSKAPGFLDDYAFLI 498 (718)
Q Consensus 419 gl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~~g~~~~~~~l~DyA~li 498 (718)
-++++||.+|++..++ ++|.+.|++++.-|.++... +|.+.. +.+.... ..++.---+..
T Consensus 117 l~IA~ALl~A~~~W~~----------------~~Y~~~A~~I~~~i~~~~~~--~g~l~~-~~d~~~~-~~~ln~SY~~~ 176 (350)
T 3ren_A 117 LRIIKALLLANNRWNS----------------FYYKFYAINIANSLLKHAEE--NETLVD-YIDNYGK-GNTTTLCYLDL 176 (350)
T ss_dssp HHHHHHHHHHHHHHCC----------------HHHHHHHHHHHHHHHHHHEE--TTEECS-EECSSCB-CSEEEGGGCCH
T ss_pred HHHHHHHHHHHHHcCc----------------HHHHHHHHHHHHHHHHHccc--cCcccC-CCCccCC-CCEeehHhcCH
Confidence 4789999999999997 78999999999999998765 355432 3222222 22222222345
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHH
Q 005023 499 SGLLDLYEFGSGTKWLVWAIELQNTQDE 526 (718)
Q Consensus 499 ~all~LYeaTgd~~~L~~A~~L~~~~~~ 526 (718)
.++-.+++. +..|.+.+..-.+.+.+
T Consensus 177 ~a~~~f~~~--~~~W~~l~~~g~~lL~~ 202 (350)
T 3ren_A 177 PTMKLLSQV--DKKWEGIYEKSNSIIEN 202 (350)
T ss_dssp HHHHHHHHH--CTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHh--cchHHHHHHHHHHHHHh
Confidence 666667776 47788887777777765
No 349
>1wu4_A Xylanase Y; (alpla/alpha)6 barrel, glycoside hydrolase family 8, hydrola; 1.35A {Bacillus halodurans} SCOP: a.102.1.2 PDB: 1wu5_A* 3a3v_A 2drr_A 2drs_A 1wu6_A* 2drq_A 2dro_A
Probab=53.91 E-value=1.2e+02 Score=32.57 Aligned_cols=190 Identities=12% Similarity=0.071 Sum_probs=102.7
Q ss_pred HHhcCCCHHHHHHHHHHHHHHHHh-----h-------hccCCC-CCCCchhhhchHHH-HHHHHHHHHHHhhhhhhhhcc
Q 005023 376 ASKLGMPLEKYLNILGECRRKLFD-----V-------RSKRPR-PHLDDKVIVSWNGL-VISSFARASKILKSEAESAMF 441 (718)
Q Consensus 376 a~~~g~~~~~~~~~l~~~r~~L~~-----~-------R~~R~~-P~~Ddkilt~WNgl-~I~ALa~A~~~~~d~~~~~~~ 441 (718)
....|.+.+++.++|+++-+.++. . -..|+. +. +..|.+--.|. |+-|+.. +|
T Consensus 18 ~~~~g~~~~~~~~~~~~~~~~wf~g~~~k~~y~~~~~~~GrviD~~-n~~v~SEGqgYGMl~Av~~-----~d------- 84 (396)
T 1wu4_A 18 FKEFGYSEAEIQERVKDTWEQLFGDNPETKIYYEVGDDLGYLLDTG-NLDVRTEGMSYGMMMAVQM-----DR------- 84 (396)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHSSCC--CCEEEETTTEEEECBTT-TTBEEHHHHHHHHHHHHHT-----TC-------
T ss_pred hhhcCCCHHHHHHHHHHHHHHHhcCCcchheeEecCCCCeEEEECC-CCCcccHHHHHHHHHHHHc-----CC-------
Confidence 345788999999999988877741 1 112322 11 12233433433 2222221 33
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHhccccC---CCeEEEeec-CCCC-CCCCCcccHHHHHHHHHHHHHHcC-----Ch
Q 005023 442 NFPVVGSDRKEYMEVAESAASFIRRHLYDEQ---THRLQHSFR-NGPS-KAPGFLDDYAFLISGLLDLYEFGS-----GT 511 (718)
Q Consensus 442 ~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~---~g~l~~~~~-~g~~-~~~~~l~DyA~li~all~LYeaTg-----d~ 511 (718)
+ ..=.++..|.+.+|..++ +|.+-+.+. +|.. ....=.++=-+++.||+...+..+ +.
T Consensus 85 ---------~---~~FD~l~~wt~~~l~~~~~~~~~L~aW~~~~~~~~~~~n~AtDgDl~IA~ALl~A~~~Wg~~~g~~~ 152 (396)
T 1wu4_A 85 ---------K---DIFDRIWNWTMKNMYMTEGVHAGYFAWSCQPDGTKNSWGPAPDGEEYFALALFFASHRWGDGDEQPF 152 (396)
T ss_dssp ---------H---HHHHHHHHHHHHHTBCCSSTTTTSBCSEECTTSCBSCSCCCHHHHHHHHHHHHHHHHHHCCCSSTTC
T ss_pred ---------H---HHHHHHHHHHHHHhccCCcccCCCceEEECCCCCcCCCCCCCHHHHHHHHHHHHHHHHhCCCCCCcH
Confidence 1 233567788888886554 465555553 3322 123334555789999999999999 68
Q ss_pred HHHHHHHHHHHHHHHhcccccCCccccCCCCCCccccccccCCCCCCCChHHHHHHHHHHHHHHhC-CCCchHHHHHHHH
Q 005023 512 KWLVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVA-GSKSDYYRQNAEH 590 (718)
Q Consensus 512 ~~L~~A~~L~~~~~~~F~D~~~Gg~f~t~~~~~~l~~r~k~~~D~a~PS~ns~~a~~LlrL~~lt~-~~~~~~y~e~a~~ 590 (718)
.|+..|.+|++.+.++=.... |+-...+.. .++ ...+..+-..||=-. -.+.++....+ ...++.|.+.++.
T Consensus 153 ~Y~~~A~~il~~i~~~~~~~~-~~~~l~p~~--~~~-~f~~~~~~~npSY~~---pa~~~~fa~~~~~~~~~~W~~~~~~ 225 (396)
T 1wu4_A 153 NYSEQARKLLHTCVHNGEGGP-GHPMWNRDN--KLI-KFIPEVEFSDPSYHL---PHFYELFSLWANEEDRVFWKEAAEA 225 (396)
T ss_dssp CHHHHHHHHHHHHHHTTSSSS-CCCSBCTTT--CCB-CSSTTCSEECGGGCC---HHHHHHHHHHSCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhccCC-CcceecCCC--cee-eecCCCCeeChhhcc---HHHHHHHHHhcccccChhHHHHHHH
Confidence 999999999999988755432 222221111 000 001111222344322 25555533211 1112568888887
Q ss_pred HHHHHHH
Q 005023 591 SLAVFET 597 (718)
Q Consensus 591 ~l~~~~~ 597 (718)
.++.+..
T Consensus 226 ~~~lL~~ 232 (396)
T 1wu4_A 226 SREYLKI 232 (396)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7776543
No 350
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=52.55 E-value=14 Score=35.32 Aligned_cols=35 Identities=11% Similarity=-0.027 Sum_probs=18.5
Q ss_pred CCcEEEeCCCCceeecccccCCCCCCCcccHHHHHHH
Q 005023 76 WPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRK 112 (718)
Q Consensus 76 wP~~vfl~p~g~p~~~~~y~p~~~~~~~~~f~~~L~~ 112 (718)
+|.+++++ ||++.+.... |.......++..++|++
T Consensus 149 ~r~tfiId-dG~I~~~~~~-~~~g~~~~~~~~~vL~~ 183 (184)
T 3uma_A 149 KRYSMLVE-DGVVKALNIE-ESPGQATASGAAAMLEL 183 (184)
T ss_dssp CCEEEEEE-TTEEEEEEEC-SSTTCCSTTSHHHHHHH
T ss_pred eeEEEEEC-CCEEEEEEEe-CCCCCCcCCCHHHHHhh
Confidence 57788884 8887764321 10111223456666654
No 351
>4fxk_B Complement C4-A alpha chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_B*
Probab=52.00 E-value=3.1e+02 Score=31.79 Aligned_cols=77 Identities=8% Similarity=0.094 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHhCCCcccCCCcEEEEecCCCCCCCCCcchHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHH
Q 005023 207 SEGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRR 286 (718)
Q Consensus 207 ~~~~~~~~~TL~~m~~gGi~D~v~GGF~RYsvD~~W~vPHFEKmLyDnA~ll~~ya~Ay~~t~~~~y~~~A~~~~~~l~~ 286 (718)
.++.+.+...++++.. |-+-+|||.- | ++-.--.|--|..+..+++|-....-+ ......++.|+.+
T Consensus 364 ~~a~~~l~~gyqrll~---~q~~DGsfs~------w--~~~~~s~wLTAyV~~~l~~A~~~i~id--~~~i~~a~~wL~~ 430 (767)
T 4fxk_B 364 DHAVDLIQKGYMRIQQ---FRKADGSYAA------W--LSRDSSTWLTAFVLKVLSLAQEQVGGS--PEKLQETSNWLLS 430 (767)
T ss_dssp HHHHHHHHHHHHHHTT---TBCTTSCBBS------S--SSSCBCHHHHHHHHHHHHHTCSSSSCC--HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH---hhcCCCCccc------C--CCCCCCchhHHHHHHHHHHHHhhcCcc--hHHHHHHHHHHHH
Confidence 4677778888888765 7788999862 4 233456788999999999987654322 2467788999987
Q ss_pred hccCCCCceee
Q 005023 287 DMIGPGGEIFS 297 (718)
Q Consensus 287 ~m~~p~Ggf~s 297 (718)
. +.++|.|..
T Consensus 431 ~-Q~~~G~f~e 440 (767)
T 4fxk_B 431 Q-QQADGSFQD 440 (767)
T ss_dssp T-BCTTSCBCC
T ss_pred h-hhhcccchh
Confidence 5 677888854
No 352
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A*
Probab=50.49 E-value=85 Score=37.20 Aligned_cols=116 Identities=10% Similarity=-0.123 Sum_probs=66.5
Q ss_pred CCCchhhhchHHHHHHHHHHHHHHhhhhhhhhcccCCCCCC-ChHHHHHHHHHHHHHHHHhccccCCCeEEEe---ecCC
Q 005023 408 HLDDKVIVSWNGLVISSFARASKILKSEAESAMFNFPVVGS-DRKEYMEVAESAASFIRRHLYDEQTHRLQHS---FRNG 483 (718)
Q Consensus 408 ~~Ddkilt~WNgl~I~ALa~A~~~~~d~~~~~~~~~~~~~~-~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~---~~~g 483 (718)
+.|+- ...|.++.+..+.+||.....+-..-+.+. ......+..+++.+|+.+++ ++ +|...-. |.|+
T Consensus 420 ~~D~~------lWl~~av~~Yi~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~~-g~-~GLp~~g~gDWnD~ 491 (822)
T 3rrs_A 420 FNDDP------LWLIAGTAAYIKETGDFSILDEPVPFDNEPGSEVPLFEHLTRSFEFTVTHR-GP-HGLPLIGRADWNDC 491 (822)
T ss_dssp BTTHH------HHHHHHHHHHHHHHCCGGGGGSEECSTTCTTCCEEHHHHHHHHHHHHHHSB-CT-TSSBBCBTCSSSTT
T ss_pred ccchH------hHHHHHHHHHHHHHCCHHHHHhhhhhhccccccccHHHHHHHHHHHHHhcC-CC-CCCcccCCCcchhh
Confidence 55665 668899999999999843221100000000 00124567888899988765 32 3432211 4443
Q ss_pred CCC------C--------C---CCc---cc---HHHHHHHHHHHHHHcCCh----HHHHHHHHHHHHHHHhcccc
Q 005023 484 PSK------A--------P---GFL---DD---YAFLISGLLDLYEFGSGT----KWLVWAIELQNTQDELFLDR 531 (718)
Q Consensus 484 ~~~------~--------~---~~l---~D---yA~li~all~LYeaTgd~----~~L~~A~~L~~~~~~~F~D~ 531 (718)
... . + +.- +- +...+..+.++.+..|++ .|.+.|.+|.+.+.++|||.
T Consensus 492 ln~~~~~~~vg~~~~~~~p~~~~~Gesv~~~al~y~AL~~~a~lA~~~G~~~~A~~~~~~A~~lk~a~~~~~Wdg 566 (822)
T 3rrs_A 492 LNLNCFSTTPGESFQTTENQAGGVAESTFIAAQFVLYGEQYAELAARRGLADVADRARGHVAEMRDALLTDGWDG 566 (822)
T ss_dssp CCTTCCCCSTTCCTTTCCSSCCCCCEEHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTBCS
T ss_pred cccccccccccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhccCc
Confidence 211 0 0 111 11 234455666777778875 58899999999999999973
No 353
>1hzf_A Complement factor C4A; alpha-alpha 6 barrel, immune system; 2.30A {Homo sapiens} SCOP: a.102.4.4
Probab=49.96 E-value=74 Score=33.63 Aligned_cols=115 Identities=7% Similarity=0.052 Sum_probs=67.8
Q ss_pred HHHHHHHHHHhcccccCCCCCCCCCCCCh-----hHHHHHHHhhhhhcccCCCCCCHHHHHHHHHHHHHHHhCCCcccCC
Q 005023 156 ALRLCAEQLSKSYDSRFGGFGSAPKFPRP-----VEIQMMLYHSKKLEDTGKSGEASEGQKMVLFTLQCMAKGGIHDHVG 230 (718)
Q Consensus 156 ~~~~~~~~l~~~~D~~~GGfg~apKFP~~-----~~l~~Ll~~~~~~~~~~~~~~~~~~~~~~~~TL~~m~~gGi~D~v~ 230 (718)
.++++++.+...- ...|||+.=++-+.. .++.+|.+..... ..+ ..++.+.++-+.. .-.-+
T Consensus 92 ~i~~g~~~ll~~Q-~~dGgf~~~~~~~~~~~lTa~v~~~l~~a~~~~------~v~---~~~i~~a~~~L~~---~Q~~d 158 (367)
T 1hzf_A 92 LIQKGYMRIQQFR-KADGSYAAWLSRDSSTWLTAFVLKVLSLAQEQV------GGS---PEKLQETSNWLLS---QQQAD 158 (367)
T ss_dssp HHHHHHHHHHTTB-CTTSCBCSSTTSCCCHHHHHHHHHHHHHHGGGT------CCC---HHHHHHHHHHHGG---GBCTT
T ss_pred HHHHHHHHHHhcc-CCCCCeeccCCCCCcHHHHHHHHHHHHHHHHHh------CCC---HHHHHHHHHHHHH---hhccC
Confidence 4566666666444 457888753332222 2233444332211 011 3566777777755 33446
Q ss_pred CcEEEEecCCCCCCCCCcc---------hHHHHHHHHHHHHHHHHccCC-------hHHHHHHHHHHHHHHHhc
Q 005023 231 GGFHRYSVDERWHVPHFEK---------MLYDQGQLANVYLDAFSLTKD-------VFYSYICRDILDYLRRDM 288 (718)
Q Consensus 231 GGF~RYsvD~~W~vPHFEK---------mLyDnA~ll~~ya~Ay~~t~~-------~~y~~~A~~~~~~l~~~m 288 (718)
|+|.. .|.+.|-+. -++-.|..+.++.++.....+ +.+...++++++||.+.+
T Consensus 159 G~~~~-----~~~~~~~~~~gg~~~~~~~~~lTA~vl~aL~~~g~~~~~~~~~~~~~~~~~~i~ra~~yL~~~~ 227 (367)
T 1hzf_A 159 GSFQD-----PCPVLDRSMQGGLVGNDETVALTAFVTIALHHGLAVFQDEGAEPLKQRVEASISKASSFLGEKA 227 (367)
T ss_dssp SCBCC-----SSCCSCGGGGGGGSSTTHHHHHHHHHHHHHHHHHTTCCTTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccc-----ccccccccccCCCCCCcccccchHHHHHHHHhhhccccccccchhhhhhHHHHHHHHHHHHHhh
Confidence 77763 566655432 266678888998888766544 346677888999998864
No 354
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=49.81 E-value=5.3 Score=38.77 Aligned_cols=45 Identities=18% Similarity=0.082 Sum_probs=30.0
Q ss_pred CCcEEE---EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCCCc
Q 005023 13 RRTHFL---INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREERP 57 (718)
Q Consensus 13 ~K~ii~---y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee~p 57 (718)
.|++++ ..||+.|+.|+...=-.+++++.+..+.+-+|+|.+.++
T Consensus 113 ~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~~~ 160 (197)
T 1un2_A 113 GAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFMG 160 (197)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSSSS
T ss_pred CCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccCcCC
Confidence 445544 489999999985321235666666666777788887653
No 355
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=47.07 E-value=25 Score=34.91 Aligned_cols=37 Identities=30% Similarity=0.478 Sum_probs=23.9
Q ss_pred CCCcEEEeCCCCceeecccccCCCCCCCcccHHHHHHHHHH
Q 005023 75 GWPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRKVKD 115 (718)
Q Consensus 75 GwP~~vfl~p~g~p~~~~~y~p~~~~~~~~~f~~~L~~i~~ 115 (718)
..|.+++++|+|+......| |.. .|+ .+-++|+.|..
T Consensus 126 ~~p~~fiID~~G~I~~~~~~-~~~--~gr-~~~eilr~l~~ 162 (233)
T 2v2g_A 126 TCRAVFIIGPDKKLKLSILY-PAT--TGR-NFSEILRVIDS 162 (233)
T ss_dssp ECEEEEEECTTSBEEEEEEE-CTT--BCC-CHHHHHHHHHH
T ss_pred ccceEEEECCCCEEEEEEec-CCC--CCC-CHHHHHHHHHH
Confidence 47999999999999865543 211 111 46677766643
No 356
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum}
Probab=47.03 E-value=1.9e+02 Score=34.05 Aligned_cols=59 Identities=15% Similarity=0.106 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHhccccCCCeEEEeec--CCCC--CC-CCCcccHHHHHHHHHHHHHHcCChHHHH
Q 005023 455 EVAESAASFIRRHLYDEQTHRLQHSFR--NGPS--KA-PGFLDDYAFLISGLLDLYEFGSGTKWLV 515 (718)
Q Consensus 455 ~~A~~~~~~l~~~~~d~~~g~l~~~~~--~g~~--~~-~~~l~DyA~li~all~LYeaTgd~~~L~ 515 (718)
+.|++...++..+... +|.+.|.+. .+.. .+ ..+.||..+++.++.+.++.|||..+|+
T Consensus 375 ~~~r~~il~~~~~Q~~--dG~~~h~~~p~~~~g~~~~~~~~~D~~lW~i~av~~Y~~~TGD~~~L~ 438 (811)
T 3qde_A 375 ERARERLLDLAATQLE--DGSAYHQYQPLTKKGNNEIGSNFNDDPLWLILATAAYIKETGDYSILK 438 (811)
T ss_dssp HHHHHHHHHHHTTBCT--TSCBCSEECTTTCCEECTTCCCBTTHHHHHHHHHHHHHHHHCCGGGGG
T ss_pred HHHHHHHHHHHhhccc--CCCccceecCCCCCCCCCCCCCcccchhHHHHHHHHHHHHHCCHHHHH
Confidence 4666666666666654 577888764 3321 12 4578899999999999999999999985
No 357
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=46.63 E-value=1.3e+02 Score=37.90 Aligned_cols=80 Identities=10% Similarity=-0.001 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHhCCCcccCCCcEEEEecCCCCCCCCCcchHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHh
Q 005023 208 EGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRD 287 (718)
Q Consensus 208 ~~~~~~~~TL~~m~~gGi~D~v~GGF~RYsvD~~W~vPHFEKmLyDnA~ll~~ya~Ay~~t~~~~y~~~A~~~~~~l~~~ 287 (718)
++.+.+...++++.. |-+-+|||.-|.-+.. +-+--.+.-|..+..+++|.....- -..+..++++||.+
T Consensus 980 ~a~~~i~~g~~~ll~---~q~~dGgf~~f~~~~~----~~~~s~wlTAyv~~~l~~a~~~~~v--~~~~l~~a~~wL~~- 1049 (1451)
T 4acq_A 980 KAIGYLNTGYQRQLN---YKHYDGSYSTFGERYG----RNQGNTWLTAFVLKTFAQARAYIFI--DEAHITQALIWLSQ- 1049 (1451)
T ss_dssp HHHHHHHHHHHHHGG---GBCTTSCBCSSTTGGG----CCCCCHHHHHHHHHHHHHHTTTSCC--CTHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHh---hcCCCCCeeeccCCCC----CCCCchhHHHHHHHHHHHhhhhccc--CHHHHHHHHHHHHh-
Confidence 466667777777765 6677899984421100 0112345589999999998765321 13578889999997
Q ss_pred ccCCCCceee
Q 005023 288 MIGPGGEIFS 297 (718)
Q Consensus 288 m~~p~Ggf~s 297 (718)
.+.++|.|+.
T Consensus 1050 ~Q~~dG~f~~ 1059 (1451)
T 4acq_A 1050 RQKDNGCFRS 1059 (1451)
T ss_dssp TEETTTEECC
T ss_pred hcccCCcccc
Confidence 4678888863
No 358
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=46.49 E-value=5.1e+02 Score=33.05 Aligned_cols=76 Identities=8% Similarity=-0.025 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHhCCCcccCCCcEEEEecCCCCCCCCCcchHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHh
Q 005023 208 EGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRD 287 (718)
Q Consensus 208 ~~~~~~~~TL~~m~~gGi~D~v~GGF~RYsvD~~W~vPHFEKmLyDnA~ll~~ya~Ay~~t~~~~y~~~A~~~~~~l~~~ 287 (718)
++++.+...++++.. |-+-+|||.= | ++-+--.+--|..+..+++|-....-+ ..+..++++||.++
T Consensus 1044 ~~~~~i~~g~~r~l~---~q~~dGsfs~------w--~~~~~s~wLTAyv~~~l~~A~~~~~v~--~~~l~~a~~~L~~~ 1110 (1676)
T 3cu7_A 1044 KLKKKLKEGMLSIMS---YRNADYSYSV------W--KGGSASTWLTAFALRVLGQVNKYVEQN--QNSICNSLLWLVEN 1110 (1676)
T ss_dssp HHHHHHHHHHHHGGG---GBCTTSCBCS------S--SSSCCCHHHHHHHHHHHHHHHTTSCCC--HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh---ccCCCCCccc------c--CCCCCcEEEeHHHHHHHHHHHhcccCC--HHHHHHHHHHHHHh
Confidence 455555555555543 5677899873 5 444556888999999999998765322 56778999999984
Q ss_pred ccCCCCcee
Q 005023 288 MIGPGGEIF 296 (718)
Q Consensus 288 m~~p~Ggf~ 296 (718)
-+.++|.|-
T Consensus 1111 ~q~~~g~f~ 1119 (1676)
T 3cu7_A 1111 YQLDNGSFK 1119 (1676)
T ss_dssp SBCTTSCBC
T ss_pred hCCCCCccc
Confidence 455677663
No 359
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=46.32 E-value=63 Score=31.55 Aligned_cols=36 Identities=33% Similarity=0.472 Sum_probs=23.8
Q ss_pred CCcEEEeCCCCceeecccccCCCCCCCcccHHHHHHHHHH
Q 005023 76 WPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRKVKD 115 (718)
Q Consensus 76 wP~~vfl~p~g~p~~~~~y~p~~~~~~~~~f~~~L~~i~~ 115 (718)
.|.+++++|+|+......| |.. .|+ .+-++|+.|..
T Consensus 131 ~p~~fiID~~G~I~~~~~~-~~~--~gr-~~~eil~~i~~ 166 (224)
T 1prx_A 131 ARVVFVFGPDKKLKLSILY-PAT--TGR-NFDEILRVVIS 166 (224)
T ss_dssp CCEEEEECTTSBEEEEEEC-CTT--BCC-CHHHHHHHHHH
T ss_pred ceEEEEECCCCEEEEEEec-CCC--CCC-CHHHHHHHHHH
Confidence 7999999999999875543 211 112 46777776643
No 360
>4fnv_A Heparinase III protein, heparitin sulfate lyase; toroid fold, -sandwich fold, heparan sulfate degradation; 1.60A {Bacteroides thetaiotaomicron}
Probab=45.75 E-value=1.3e+02 Score=35.02 Aligned_cols=91 Identities=8% Similarity=-0.075 Sum_probs=52.2
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEeecCCCCCCCCCcccHHH
Q 005023 417 WNGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPSKAPGFLDDYAF 496 (718)
Q Consensus 417 WNgl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~~g~~~~~~~l~DyA~ 496 (718)
|--..+.||+.++.++++-+ +.++|++.|.+.++.-.+....++ |+.+ +.-+.=+.+
T Consensus 261 h~l~~~~aL~~agl~~pe~~------------~~~~w~~~A~~~L~~el~~Qi~~D-G~~~----------E~Sp~Yh~~ 317 (702)
T 4fnv_A 261 ILISQANALATAGTLMPEFK------------NAEKWMNTGYQILSEEVQNQIMSD-GWHK----------EMSLHYHIG 317 (702)
T ss_dssp HHHHHHHHHHHHHHHCTTBT------------THHHHHHHHHHHHHHHHHHSBCTT-SCBT----------TCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCc------------cHHHHHHHHHHHHHHHHHhhcCCC-Cccc----------cCCHHHHHH
Confidence 44445678999999987511 126899999998877666666654 3211 122233445
Q ss_pred HHHHHHHH---HHHcCC-----hHHHHHHHHHHHHHHHhcccc
Q 005023 497 LISGLLDL---YEFGSG-----TKWLVWAIELQNTQDELFLDR 531 (718)
Q Consensus 497 li~all~L---YeaTgd-----~~~L~~A~~L~~~~~~~F~D~ 531 (718)
++..++.+ .+..+- +.+.+...++...+. .+..+
T Consensus 318 vL~~ll~~~~la~~~g~~~~~p~~~~~~L~km~~~l~-~l~~P 359 (702)
T 4fnv_A 318 IVADFYEAMKLAEANQLSSKLPSDFTEPLRKAAEVVM-YFTYP 359 (702)
T ss_dssp HHHHHHHHHHHHHHTTCGGGSCTTTTHHHHHHHHHHH-HTSCG
T ss_pred HHHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHHH-HHcCC
Confidence 55555544 334343 356666666666654 34444
No 361
>3t72_q RNA polymerase sigma factor RPOD, DNA-directed RN polymerase subunit beta; winged-helix motif, transcription activation, DNA-binding; 4.33A {Escherichia coli} PDB: 1tlh_B
Probab=45.68 E-value=52 Score=28.25 Aligned_cols=29 Identities=17% Similarity=0.177 Sum_probs=26.8
Q ss_pred CchHHHHhcCCCHHHHHHHHHHHHHHHHh
Q 005023 371 DSSASASKLGMPLEKYLNILGECRRKLFD 399 (718)
Q Consensus 371 ~~~~~a~~~g~~~~~~~~~l~~~r~~L~~ 399 (718)
+.+++|+.+|++.+.+...+..++++|+.
T Consensus 41 s~~EIA~~lgiS~~tVr~~~~rAlkkLR~ 69 (99)
T 3t72_q 41 TLEEVGKQFDVTRERIRQIEAKALRKLRH 69 (99)
T ss_pred CHHHHHHHHCcCHHHHHHHHHHHHHHHHH
Confidence 56799999999999999999999999986
No 362
>1qqf_A Protein (complement C3DG); alpha-alpha barrel, immune system; 1.45A {Rattus norvegicus} SCOP: a.102.4.4 PDB: 1qsj_A 3d5r_A 2noj_A 2gox_A 3d5s_A 1c3d_A 2xqw_A
Probab=45.53 E-value=23 Score=35.90 Aligned_cols=79 Identities=10% Similarity=0.079 Sum_probs=57.9
Q ss_pred CHHHHHHHHHHHHHHHhCCCcccCCCcEEEEecCCCCCCCCCcchHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHH
Q 005023 206 ASEGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLR 285 (718)
Q Consensus 206 ~~~~~~~~~~TL~~m~~gGi~D~v~GGF~RYsvD~~W~vPHFEKmLyDnA~ll~~ya~Ay~~t~~~~y~~~A~~~~~~l~ 285 (718)
.+++.+.+...++++.. +-+-+|||.-|.-+ .--.+..|..+.+++.+-.... .-..+.+++++||.
T Consensus 33 ~~~~~~~i~~g~~~~l~---~q~~dGgf~~f~~~--------~~s~wlTa~v~~~l~~a~~~~~--v~~~~i~~a~~~L~ 99 (277)
T 1qqf_A 33 RQEALELIKKGYTQQLA---FKQPISAYAAFNNR--------PPSTWLTAYVSRVFSLAANLIA--IDSQVLCGAVKWLI 99 (277)
T ss_dssp HHHHHHHHHHHHHHHHT---TBCTTSCBCSSTTS--------CCCHHHHHHHHHHHHHHTTTSC--CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH---hcCCCCCccccCCC--------CccHHHHHHHHHHHHHHhhcCC--CCHHHHHHHHHHHH
Confidence 35788888888888886 67889999743211 2236778999999999876532 22467789999999
Q ss_pred HhccCCCCceee
Q 005023 286 RDMIGPGGEIFS 297 (718)
Q Consensus 286 ~~m~~p~Ggf~s 297 (718)
++.+.++|.|+.
T Consensus 100 ~~~Q~~dG~f~~ 111 (277)
T 1qqf_A 100 LEKQKPDGVFQE 111 (277)
T ss_dssp HHHBCTTSCBCC
T ss_pred HhccCCCCCccC
Confidence 656778898864
No 363
>1kwf_A Endoglucanase A; hydrolase, inverting glycosidase, atomic resolution, protein-carbohydrate interactions, reaction mechanism, cellulase; HET: BGC; 0.94A {Clostridium thermocellum} SCOP: a.102.1.2 PDB: 1is9_A 1cem_A
Probab=43.87 E-value=1.7e+02 Score=30.95 Aligned_cols=124 Identities=12% Similarity=0.106 Sum_probs=74.9
Q ss_pred HHHHHHHHHhccccCCCeEEEeecC-CCC-C---CC-CCcccHHHHHHHHHHHHHHcCCh---HHHHHHHHHHHHHHHhc
Q 005023 458 ESAASFIRRHLYDEQTHRLQHSFRN-GPS-K---AP-GFLDDYAFLISGLLDLYEFGSGT---KWLVWAIELQNTQDELF 528 (718)
Q Consensus 458 ~~~~~~l~~~~~d~~~g~l~~~~~~-g~~-~---~~-~~l~DyA~li~all~LYeaTgd~---~~L~~A~~L~~~~~~~F 528 (718)
.++..|.+.++.+ +|.+-+.+.. |+. . .. .=.++=-+++.||+...+..++. .|+..|.+|++.+.++-
T Consensus 82 d~l~~wt~~~~~~--~~l~aW~~~~~g~~~~~~d~~~~AtDgDl~IA~ALl~A~~~W~~~g~~~Y~~~A~~i~~~i~~~~ 159 (363)
T 1kwf_A 82 DDLYRYVKSHFNG--NGLMHWHIDANNNVTSHDGGDGAATDADEDIALALIFADKLWGSSGAINYGQEARTLINNLYNHC 159 (363)
T ss_dssp HHHHHHHHTTBCT--TSSBCSEECTTSCBCTTTTTTSCBHHHHHHHHHHHHHHHHHHCSSSSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCC--CCCeEEEECCCCCcccCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHh
Confidence 4567777777743 4555555532 321 1 11 23555678999999999999988 89999999999999886
Q ss_pred ccccCCccccCCCCCCccccccccCCCCCCCChHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHH
Q 005023 529 LDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRLASIVAGSKSDYYRQNAEHSLAVFET 597 (718)
Q Consensus 529 ~D~~~Gg~f~t~~~~~~l~~r~k~~~D~a~PS~ns~~a~~LlrL~~lt~~~~~~~y~e~a~~~l~~~~~ 597 (718)
+.+ |.+.-.+.+.. ...+...||= .+...+-.++.++++ ..|.+.++..++.+..
T Consensus 160 ~~~--~~~~l~pg~~~-------~~~~~~npSY--~~p~~~~~fa~~~~~---~~W~~~~~~~~~~l~~ 214 (363)
T 1kwf_A 160 VEH--GSYVLKPGDRW-------GGSSVTNPSY--FAPAWYKVYAQYTGD---TRWNQVADKCYQIVEE 214 (363)
T ss_dssp BCT--TTCCBCSBSSS-------CBTTBBCGGG--CCHHHHHHHHHHHCC---THHHHHHHHHHHHHHH
T ss_pred ccC--CCeEEeccccC-------CCCCEecchh--cCHHHHHHHHHccCC---chHHHHHHHHHHHHHH
Confidence 652 33212222100 0001122332 234455666777764 5688888777766544
No 364
>1h12_A Endo-1,4-beta-xylanase; hydrolase, xylan degradation, psychrophilic, cold adaptation, temperature, glycosyl hydrolase, family 8; HET: XYP XYS; 1.2A {Pseudoalteromonas haloplanktis} SCOP: a.102.1.2 PDB: 1h13_A 1xw2_A 1xwq_A* 1h14_A 1xwt_A 2b4f_A* 2a8z_A*
Probab=42.87 E-value=68 Score=34.72 Aligned_cols=123 Identities=19% Similarity=0.133 Sum_probs=71.6
Q ss_pred HHHHHHHHHhc----cccC---CCeEEEee--c-CCCC-CCC--CCcccHHHHHHHHHHHHHHcC---ChHHHHHHHHHH
Q 005023 458 ESAASFIRRHL----YDEQ---THRLQHSF--R-NGPS-KAP--GFLDDYAFLISGLLDLYEFGS---GTKWLVWAIELQ 521 (718)
Q Consensus 458 ~~~~~~l~~~~----~d~~---~g~l~~~~--~-~g~~-~~~--~~l~DyA~li~all~LYeaTg---d~~~L~~A~~L~ 521 (718)
.++..|.+.++ ..++ +|.+-+.+ . +|.. ... .=.|+=-+++.||+...+..+ +..|+..|.+|+
T Consensus 97 D~L~~wtk~~l~~~~~~~~g~~~~l~aW~~g~~~~g~~~d~n~~sAtDgDl~IA~ALl~A~~~Wg~~g~~~Y~~~A~~il 176 (405)
T 1h12_A 97 DNLWRFAKAYQKNPDNHPDAKKQGVYAWKLKLNQNGFVYKVDEGPAPDGEEYFAFALLNASARWGNSGEFNYYNDAITML 176 (405)
T ss_dssp HHHHHHHHHHTBCCTTCSSGGGTTCBEEEEEECTTSCEEEEEEEECHHHHHHHHHHHHHHHHHHCSSSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccccCCcccceEEEeccCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHcCCCCchhHHHHHHHHH
Confidence 46777888888 3333 46666655 2 2321 111 223444689999999999999 789999999999
Q ss_pred HHHHHhcccccCCccccCCCCCCccccccccCCCCCCCChHHHHHHHHHHH-HHHhCC-CCchHHHHHHHHHHHHHH
Q 005023 522 NTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRL-ASIVAG-SKSDYYRQNAEHSLAVFE 596 (718)
Q Consensus 522 ~~~~~~F~D~~~Gg~f~t~~~~~~l~~r~k~~~D~a~PS~ns~~a~~LlrL-~~lt~~-~~~~~y~e~a~~~l~~~~ 596 (718)
+.+.++- +.+|..-..+... .. .-||=-. -.++++ +.++++ ...+.|.+.++..++.+.
T Consensus 177 ~~I~~~~--~~~~~~~f~p~~~--~~---------~npSY~~---pa~~~~fa~~~~~~~~~~~W~~v~~~~~~lL~ 237 (405)
T 1h12_A 177 NTIKNKL--MENQIIRFSPYID--NL---------TDPSYHI---PAFYDYFANNVTNQADKNYWRQVATKSRTLLK 237 (405)
T ss_dssp HHHHHHS--EETTEECSCTTCS--SC---------BCGGGCC---HHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhC--CCCCeeEEecCCC--Ce---------eChhhcC---HHHHHHHHHhcccccCchhHHHHHHHHHHHHH
Confidence 9998875 3333221122111 11 2233322 234444 555543 111558888877777654
No 365
>1qqf_A Protein (complement C3DG); alpha-alpha barrel, immune system; 1.45A {Rattus norvegicus} SCOP: a.102.4.4 PDB: 1qsj_A 3d5r_A 2noj_A 2gox_A 3d5s_A 1c3d_A 2xqw_A
Probab=42.22 E-value=2.7e+02 Score=27.67 Aligned_cols=121 Identities=9% Similarity=0.002 Sum_probs=65.0
Q ss_pred HHHHHHHHHHhcccccCCCCCCCCCCCChhHH-HHHHHhhhhhcccCCCCCCHHHHHHHHHHHHHHHhCCCcccCCCcEE
Q 005023 156 ALRLCAEQLSKSYDSRFGGFGSAPKFPRPVEI-QMMLYHSKKLEDTGKSGEASEGQKMVLFTLQCMAKGGIHDHVGGGFH 234 (718)
Q Consensus 156 ~~~~~~~~l~~~~D~~~GGfg~apKFP~~~~l-~~Ll~~~~~~~~~~~~~~~~~~~~~~~~TL~~m~~gGi~D~v~GGF~ 234 (718)
.+++.+..+.. +-...|||+.-+.-|....+ .+.+.......... ..++ +++.++++-+.. -.-+-+|+|.
T Consensus 39 ~i~~g~~~~l~-~q~~dGgf~~f~~~~~s~wlTa~v~~~l~~a~~~~--~v~~---~~i~~a~~~L~~--~~Q~~dG~f~ 110 (277)
T 1qqf_A 39 LIKKGYTQQLA-FKQPISAYAAFNNRPPSTWLTAYVSRVFSLAANLI--AIDS---QVLCGAVKWLIL--EKQKPDGVFQ 110 (277)
T ss_dssp HHHHHHHHHHT-TBCTTSCBCSSTTSCCCHHHHHHHHHHHHHHTTTS--CCCH---HHHHHHHHHHHH--HHBCTTSCBC
T ss_pred HHHHHHHHHHH-hcCCCCCccccCCCCccHHHHHHHHHHHHHHhhcC--CCCH---HHHHHHHHHHHH--hccCCCCCcc
Confidence 34555555654 45668999875554443322 22222221111111 1223 344455555541 0122356665
Q ss_pred EEecCCCCCCCCCc----------chHHHHHHHHHHHHHHHHcc--CChHHHHHHHHHHHHHHHhcc
Q 005023 235 RYSVDERWHVPHFE----------KMLYDQGQLANVYLDAFSLT--KDVFYSYICRDILDYLRRDMI 289 (718)
Q Consensus 235 RYsvD~~W~vPHFE----------KmLyDnA~ll~~ya~Ay~~t--~~~~y~~~A~~~~~~l~~~m~ 289 (718)
. .|.+.|-+ .-++-.|..+.++.++.... +-+.....++++++||.+...
T Consensus 111 ~-----~~~~~~~~~~g~~~~~~~~~~~lta~vl~aL~~~~~~~~~~~~~~~~~i~~A~~~L~~~~~ 172 (277)
T 1qqf_A 111 E-----DGPVIHQEMIGGFRNTKEADVSLTAFVLIALQEARDICEGQVNSLPGSINKAGEYLEASYL 172 (277)
T ss_dssp C-----SSCCSCGGGGGGGGSCTTHHHHHHHHHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHHHHHT
T ss_pred C-----CccccchhhcCCCCCCccCccchHHHHHHHHHhhhhccccCCCchHHHHHHHHHHHHHHhc
Confidence 3 46666643 12566888999998886653 334566788999999998653
No 366
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=42.06 E-value=3e+02 Score=29.75 Aligned_cols=74 Identities=12% Similarity=-0.054 Sum_probs=49.8
Q ss_pred cHHHHHHHHHHHHHH-c--CChHHHHHHHHHHHHHHHhcccccCCccccCCCCCCccccccccCCCCCCCChHHHHHHHH
Q 005023 493 DYAFLISGLLDLYEF-G--SGTKWLVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINL 569 (718)
Q Consensus 493 DyA~li~all~LYea-T--gd~~~L~~A~~L~~~~~~~F~D~~~Gg~f~t~~~~~~l~~r~k~~~D~a~PS~ns~~a~~L 569 (718)
|-+..+.+|..+|.. + .++.|.+.+.+-.+.++.--+. +|||---..+. .-........| -++++.|
T Consensus 150 dTa~vl~aL~rv~~~~t~~~~~~y~~Ai~Rgl~wlL~mQ~~--nGGWpqFdpdn-~~y~~~IpFnD-------Dvt~rvl 219 (408)
T 1r76_A 150 ATVTEIRFLAQVVSQLAPEEAAPYRDAALKGIEYLLASQFP--NGGWPQVWPLE-GGYHDAITYND-------DALVHVA 219 (408)
T ss_dssp TTHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHSCT--TSCCBSBSSCC-CGGGGSEECGG-------GHHHHHH
T ss_pred hHHHHHHHHHHHHhhccccccHHHHHHHHHHHHHHHHccCC--CCCCcCcCccc-cccccCCCcCc-------HHHHHHH
Confidence 568889999999998 8 8999999999999998877653 56663222221 12233334444 4677776
Q ss_pred HHHHHHh
Q 005023 570 VRLASIV 576 (718)
Q Consensus 570 lrL~~lt 576 (718)
..|..+-
T Consensus 220 e~L~~~~ 226 (408)
T 1r76_A 220 ELLSDIA 226 (408)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666554
No 367
>1h12_A Endo-1,4-beta-xylanase; hydrolase, xylan degradation, psychrophilic, cold adaptation, temperature, glycosyl hydrolase, family 8; HET: XYP XYS; 1.2A {Pseudoalteromonas haloplanktis} SCOP: a.102.1.2 PDB: 1h13_A 1xw2_A 1xwq_A* 1h14_A 1xwt_A 2b4f_A* 2a8z_A*
Probab=41.56 E-value=40 Score=36.54 Aligned_cols=94 Identities=17% Similarity=0.197 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEeecCCCCCCCCCcccHHHHH
Q 005023 419 GLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPSKAPGFLDDYAFLI 498 (718)
Q Consensus 419 gl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~~g~~~~~~~l~DyA~li 498 (718)
-.++.||.+|++.-++. | ..+|.+.|+++++.|.++. +.++.+. +..+.. ..-+=++.+
T Consensus 147 l~IA~ALl~A~~~Wg~~-----------g--~~~Y~~~A~~il~~I~~~~--~~~~~~~--f~p~~~----~~~npSY~~ 205 (405)
T 1h12_A 147 EYFAFALLNASARWGNS-----------G--EFNYYNDAITMLNTIKNKL--MENQIIR--FSPYID----NLTDPSYHI 205 (405)
T ss_dssp HHHHHHHHHHHHHHCSS-----------S--SCCHHHHHHHHHHHHHHHS--EETTEEC--SCTTCS----SCBCGGGCC
T ss_pred HHHHHHHHHHHHHcCCC-----------C--chhHHHHHHHHHHHHHHhC--CCCCeeE--EecCCC----CeeChhhcC
Confidence 47889999999999841 1 1579999999999999887 3343332 223321 112223344
Q ss_pred HHHHHH-HHHcCC----hHHHHHHHHHHHHHHHhcccccCC
Q 005023 499 SGLLDL-YEFGSG----TKWLVWAIELQNTQDELFLDREGG 534 (718)
Q Consensus 499 ~all~L-YeaTgd----~~~L~~A~~L~~~~~~~F~D~~~G 534 (718)
-+++++ ++++++ +.|.+.+....+.+.+.. .+.+|
T Consensus 206 pa~~~~fa~~~~~~~~~~~W~~v~~~~~~lL~~~~-~~~tG 245 (405)
T 1h12_A 206 PAFYDYFANNVTNQADKNYWRQVATKSRTLLKNHF-TKVSG 245 (405)
T ss_dssp HHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHH-HHHSS
T ss_pred HHHHHHHHHhcccccCchhHHHHHHHHHHHHHHhc-CCCCC
Confidence 577777 556766 779998888777776554 33344
No 368
>1kwf_A Endoglucanase A; hydrolase, inverting glycosidase, atomic resolution, protein-carbohydrate interactions, reaction mechanism, cellulase; HET: BGC; 0.94A {Clostridium thermocellum} SCOP: a.102.1.2 PDB: 1is9_A 1cem_A
Probab=41.50 E-value=41 Score=35.92 Aligned_cols=93 Identities=11% Similarity=0.080 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEeecCCCCCCCCCcccHHHH-
Q 005023 419 GLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPSKAPGFLDDYAFL- 497 (718)
Q Consensus 419 gl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~~g~~~~~~~l~DyA~l- 497 (718)
-.++.||.+|++.-++.. ..+|.+.|+++++-|.++.+.+.. .++. ..+. .....+++. ++.
T Consensus 123 l~IA~ALl~A~~~W~~~g-------------~~~Y~~~A~~i~~~i~~~~~~~~~-~~l~-pg~~-~~~~~~~np-SY~~ 185 (363)
T 1kwf_A 123 EDIALALIFADKLWGSSG-------------AINYGQEARTLINNLYNHCVEHGS-YVLK-PGDR-WGGSSVTNP-SYFA 185 (363)
T ss_dssp HHHHHHHHHHHHHHCSSS-------------SSCHHHHHHHHHHHHHHHHBCTTT-CCBC-SBSS-SCBTTBBCG-GGCC
T ss_pred HHHHHHHHHHHHHhCCCc-------------chhHHHHHHHHHHHHHHHhccCCC-eEEe-cccc-CCCCCEecc-hhcC
Confidence 478899999999998710 027999999999999998876422 1111 1110 000112221 222
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHHHHhc
Q 005023 498 ISGLLDLYEFGSGTKWLVWAIELQNTQDELF 528 (718)
Q Consensus 498 i~all~LYeaTgd~~~L~~A~~L~~~~~~~F 528 (718)
...+-.+++.+++..|.+.+....+.+.+..
T Consensus 186 p~~~~~fa~~~~~~~W~~~~~~~~~~l~~~~ 216 (363)
T 1kwf_A 186 PAWYKVYAQYTGDTRWNQVADKCYQIVEEVK 216 (363)
T ss_dssp HHHHHHHHHHHCCTHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHccCCchHHHHHHHHHHHHHHHh
Confidence 3333445567788899998888777765543
No 369
>3qxf_A Endoglucanase; cellulase, GH8, cellulose synthesis, cellulose degradation,; 1.85A {Escherichia coli k-12} PDB: 3qxq_A*
Probab=41.41 E-value=33 Score=36.58 Aligned_cols=75 Identities=8% Similarity=0.009 Sum_probs=51.9
Q ss_pred HHHHHHHHHhccccC--CCeEEEeec---CCCC---CCCCCcccHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcc
Q 005023 458 ESAASFIRRHLYDEQ--THRLQHSFR---NGPS---KAPGFLDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFL 529 (718)
Q Consensus 458 ~~~~~~l~~~~~d~~--~g~l~~~~~---~g~~---~~~~~l~DyA~li~all~LYeaTgd~~~L~~A~~L~~~~~~~F~ 529 (718)
.++..|.+.++...+ ++.+.+.+. +|.. +...=.|+=-+++.||+...+..+++.|+..|..|++.+.++-.
T Consensus 53 D~Lw~wt~~~l~~~d~~~~L~aW~w~~~~~g~~~v~D~nsAtDGDl~IA~ALl~A~~~Wg~~~Y~~~A~~il~~I~~~~v 132 (355)
T 3qxf_A 53 DNILDWTQNNLAQGSLKERLPAWLWGKKENSKWEVLDSNSASDGDVWMAWSLLEAGRLWKEQRYTDIGSALLKRIAREEV 132 (355)
T ss_dssp HHHHHHHHHHHSTTCTTTSCCCSEEEECTTSCEEEEECSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHE
T ss_pred HHHHHHHHHHhccCCcccCCceEEEcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcc
Confidence 456777778877543 344433332 2321 22233455578999999999999999999999999999988765
Q ss_pred ccc
Q 005023 530 DRE 532 (718)
Q Consensus 530 D~~ 532 (718)
...
T Consensus 133 ~~~ 135 (355)
T 3qxf_A 133 VTV 135 (355)
T ss_dssp EEE
T ss_pred ccC
Confidence 443
No 370
>2wy7_A Complement C3D fragment; immune system, immune response, innate immunity, complement inflammatory response; 1.70A {Homo sapiens} PDB: 2wy8_A 3oed_A 3oxu_A 3rj3_A 1ghq_A* 1w2s_A
Probab=41.09 E-value=28 Score=35.86 Aligned_cols=78 Identities=10% Similarity=0.098 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHHhCCCcccCCCcEEEEecCCCCCCCCCcchHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHH
Q 005023 207 SEGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRR 286 (718)
Q Consensus 207 ~~~~~~~~~TL~~m~~gGi~D~v~GGF~RYsvD~~W~vPHFEKmLyDnA~ll~~ya~Ay~~t~~~~y~~~A~~~~~~l~~ 286 (718)
+++.+++...++++.. +-+-+|||.-|.- . .--.+..|..+.+++.|-.... .-..+.+++++||.+
T Consensus 50 ~~~~~~i~~g~~~~l~---~q~~dGgf~~f~~----~----~~s~wlTa~v~~~l~~a~~~~~--v~~~~i~~a~~~L~~ 116 (310)
T 2wy7_A 50 QGALELIKKGYTQQLA---FRQPSSAFAAFVK----R----APSTWLTAYVVKVFSLAVNLIA--IDSQVLCGAVKWLIL 116 (310)
T ss_dssp HHHHHHHHHHHHHHHT---TBCTTSCBCSSTT----S----CCCHHHHHHHHHHHHHHTTTSC--CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH---hcCCCCCcccCCC----C----CccHHHHHHHHHHHHHHHhcCC--CCHHHHHHHHHHHHH
Confidence 5778888888888876 5788999974321 1 2235678999999999876532 224677899999996
Q ss_pred hccCCCCceee
Q 005023 287 DMIGPGGEIFS 297 (718)
Q Consensus 287 ~m~~p~Ggf~s 297 (718)
+.+.++|.|+.
T Consensus 117 ~~Q~~dGsf~~ 127 (310)
T 2wy7_A 117 EKQKPDGVFQE 127 (310)
T ss_dssp HHBCTTSCBCC
T ss_pred hhcCCCCcccc
Confidence 56778998864
No 371
>1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A*
Probab=41.07 E-value=3.6e+02 Score=29.64 Aligned_cols=47 Identities=9% Similarity=0.070 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEee
Q 005023 419 GLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSF 480 (718)
Q Consensus 419 gl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~ 480 (718)
+++..||.++.++...- |.....|.+.|.++.++| +++|+ |.+.+.+
T Consensus 189 ~~~~~AL~~aa~lA~~~-----------g~~~~~w~~~ad~I~~~i-~~~w~---g~f~~~~ 235 (472)
T 1gai_A 189 AVQHRALVEGSAFATAV-----------GSSCSWCDSQAPQILCYL-QSFWT---GSYILAN 235 (472)
T ss_dssp HHHHHHHHHHHHHHHHT-----------TCCCHHHHHHHHHHHHHH-GGGBC---SSSBCSE
T ss_pred HHHHHHHHHHHHHHHHc-----------CCcHHHHHHHHHHHHHHH-HhhcC---CceEEee
Confidence 56666777776654320 111268999999999999 89996 4555444
No 372
>2a6h_F RNA polymerase sigma factor RPOD; RNA polymerase holoenzyme, streptolydigin, antibiotic, transcription regulation; HET: STD; 2.40A {Thermus thermophilus} SCOP: a.4.13.1 a.4.13.2 a.177.1.1 PDB: 1smy_F* 1zyr_F* 1iw7_F* 2a69_F* 2a6e_F 2a68_F* 2be5_F* 2cw0_F 3eql_F* 3dxj_F* 1l9u_H
Probab=40.25 E-value=47 Score=36.10 Aligned_cols=64 Identities=23% Similarity=0.256 Sum_probs=43.8
Q ss_pred HHHHHhc----hhHHHHHHHhcccCCCCcCCCCCCCCCCccCCcceeeccCCchHHHHhcCCCHHHHHHHHHHHHHHHH-
Q 005023 324 EVEDILG----EHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLEKYLNILGECRRKLF- 398 (718)
Q Consensus 324 Ei~~~L~----~~~~~~~~~~~v~~~Gn~~~~~~~dp~~~~eg~nvL~~~~~~~~~a~~~g~~~~~~~~~l~~~r~~L~- 398 (718)
+|..+|. .+..++.-.|++.... ..+.+++|+.+|++.+.++.++..+++||+
T Consensus 353 ~L~~aL~~L~~rer~Vl~lr~~L~~~e----------------------~~Tl~EIA~~lgiS~erVrqi~~rAl~kLR~ 410 (423)
T 2a6h_F 353 ELEKALSKLSEREAMVLKLRKGLIDGR----------------------EHTLEEVGAFFGVTRERIRQIENKALRKLKY 410 (423)
T ss_dssp HHHHHHHSSCHHHHHHHHHHHHTTCC---------------------------CHHHHSSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHhccCCCC----------------------CCCHHHHHHHHCcCHHHHHHHHHHHHHHHHh
Confidence 4555554 2456888888886321 135679999999999999999999999998
Q ss_pred h-hhccCCCCCC
Q 005023 399 D-VRSKRPRPHL 409 (718)
Q Consensus 399 ~-~R~~R~~P~~ 409 (718)
. .|.++.+.++
T Consensus 411 ~~~~~~~l~~~l 422 (423)
T 2a6h_F 411 HESRTRKLRDFL 422 (423)
T ss_dssp HHHHTTSSSSCC
T ss_pred hhhhhHHHHHhh
Confidence 3 3444444443
No 373
>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A
Probab=39.98 E-value=2e+02 Score=31.82 Aligned_cols=190 Identities=13% Similarity=0.122 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHH---HHHhCCCcccCCCcEE----------EEecCCCCCCCCCcchHHH-HHH---HHHHHHHHHHcc
Q 005023 206 ASEGQKMVLFTLQ---CMAKGGIHDHVGGGFH----------RYSVDERWHVPHFEKMLYD-QGQ---LANVYLDAFSLT 268 (718)
Q Consensus 206 ~~~~~~~~~~TL~---~m~~gGi~D~v~GGF~----------RYsvD~~W~vPHFEKmLyD-nA~---ll~~ya~Ay~~t 268 (718)
+....+.+..-+. .+.+ + ..-.|+|. +|.+|..-..+-....=.| .|+ .++.|.+.....
T Consensus 88 ~~~l~~~a~~y~~~~~~lq~--~-~~~~G~~~~~~~~glgep~y~vdG~~~~~~w~~~Q~D~~g~~~~al~~~~~~~~~~ 164 (492)
T 2fba_A 88 NTTLAKAVEYYINTSYNLQR--T-SNPSGSFDDENHKGLGEPKFNTDGSAYTGAWGRPQNDGPALRAYAISRYLNDVNSL 164 (492)
T ss_dssp CHHHHHHHHHHHHHHHHHHT--S-CBTTBCTTSGGGGGGGCCEECTTSCBCCSCCSCCBTTHHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHhc--c-cCCCCCcCcccccccCceeeccCCCcCCcccCCccccchhHHHHHHHHHHHHhhcc
Q ss_pred C-----------------ChHHHHHHHHHHHHHHHhccCCCCceeeeccCCcccccCcccccCCceEeechHHHHHHhch
Q 005023 269 K-----------------DVFYSYICRDILDYLRRDMIGPGGEIFSAEDADSAETEGATRKKEGAFYVWTSKEVEDILGE 331 (718)
Q Consensus 269 ~-----------------~~~y~~~A~~~~~~l~~~m~~p~Ggf~sa~DADs~~~~~~~~~~EG~yY~Wt~~Ei~~~L~~ 331 (718)
+ ++.|..+++..++||.+....|+-+..- +-++++++|.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~v~~~w~~pd~dlWE---------------er~g~~~~T~--------- 220 (492)
T 2fba_A 165 NEGKLVLTDSGDINFSSTEDIYKNIIKPDLEYVIGYWDSTGFDLWE---------------ENQGRHFFTS--------- 220 (492)
T ss_dssp STTCCSSTTCTTCSCSSHHHHHHHTHHHHHHHHHHHTTSCEECTTS---------------CCEECCHHHH---------
T ss_pred ccchhhhhhhccccccccHHHHHHHHHHHHHHHHHhcCCCCCCCcC---------------ccCCCChHHH---------
Q ss_pred hHHHHHHHhcccCCCCcCCCCCCCCCCccCCcceeeccCCchHHHHhcCCCHHHHHHHHHHHHHHHHhhhccCCCCCCCc
Q 005023 332 HAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLEKYLNILGECRRKLFDVRSKRPRPHLDD 411 (718)
Q Consensus 332 ~~~~~~~~~~v~~~Gn~~~~~~~dp~~~~eg~nvL~~~~~~~~~a~~~g~~~~~~~~~l~~~r~~L~~~R~~R~~P~~Dd 411 (718)
T Consensus 221 -------------------------------------------------------------------------------- 220 (492)
T 2fba_A 221 -------------------------------------------------------------------------------- 220 (492)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Q ss_pred hhhhchHHHHHHHHHHH---HHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHh---ccccCCCeEEEee----c
Q 005023 412 KVIVSWNGLVISSFARA---SKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRH---LYDEQTHRLQHSF----R 481 (718)
Q Consensus 412 kilt~WNgl~I~ALa~A---~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~---~~d~~~g~l~~~~----~ 481 (718)
+++..||.++ ++.+++.... +.|.+.|.++.+.|.++ +|+++.|.+.+++ .
T Consensus 221 -------~~~~~AL~~aa~lA~~~g~~~~a------------~~w~~~ad~i~~~I~~~~~~~w~~~~~~f~~~~~~~~~ 281 (492)
T 2fba_A 221 -------LVQQKALAYAVDIAKSFDDGDFA------------NTLSSTASTLESYLSGSDGGFVNTDVNHIVENPDLLQQ 281 (492)
T ss_dssp -------HHHHHHHHHHHHHHHHTTCHHHH------------HHHHHHHHHHHHHHHSTTTCCEETTTTEECSSHHHHHT
T ss_pred -------HHHHHHHHHHHHHHHHcCCchHH------------HHHHHHHHHHHHHHHHhhhcCCCCCCCEEEEecccccc
Q ss_pred CCCCCCCCCcccHHHHHHHHHHHH---------HHcCChHHHHHHHHHHHHHHHh
Q 005023 482 NGPSKAPGFLDDYAFLISGLLDLY---------EFGSGTKWLVWAIELQNTQDEL 527 (718)
Q Consensus 482 ~g~~~~~~~l~DyA~li~all~LY---------eaTgd~~~L~~A~~L~~~~~~~ 527 (718)
.|..... |.++.+.+.-| ---.|++.+.....+.+.+...
T Consensus 282 ~~~~~lD------as~Ll~~~~~f~~~~~~~~~~~p~Dpr~l~Tl~ai~~~L~~~ 330 (492)
T 2fba_A 282 NSRQGLD------SATYIGPLLTHDIGESSSTPFDVDNEYVLQSYYLLLEDNKDR 330 (492)
T ss_dssp TSCCSCC------THHHHHHHHHSCTTSCCCCSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCCccc------HHHHHHHHhccccccccCCccCCCCHHHHHHHHHHHHHHhcc
No 374
>1tty_A Sigma-A, RNA polymerase sigma factor RPOD; helix-turn-helix, transcription; NMR {Thermotoga maritima} SCOP: a.4.13.2
Probab=39.44 E-value=57 Score=26.76 Aligned_cols=55 Identities=20% Similarity=0.230 Sum_probs=40.4
Q ss_pred HHHHHHhc----hhHHHHHHHhcccCCCCcCCCCCCCCCCccCCcceeeccCCchHHHHhcCCCHHHHHHHHHHHHHHHH
Q 005023 323 KEVEDILG----EHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLEKYLNILGECRRKLF 398 (718)
Q Consensus 323 ~Ei~~~L~----~~~~~~~~~~~v~~~Gn~~~~~~~dp~~~~eg~nvL~~~~~~~~~a~~~g~~~~~~~~~l~~~r~~L~ 398 (718)
++|.+++. .+..+|.-.|.+.... | .+..++|+.+|++...+...+..++++|.
T Consensus 10 ~~l~~~l~~L~~~er~vl~l~~~l~~~~---------------~-------~s~~EIA~~lgis~~tV~~~~~ra~~kLr 67 (87)
T 1tty_A 10 EELEKVLKTLSPREAMVLRMRYGLLDGK---------------P-------KTLEEVGQYFNVTRERIRQIEVKALRKLR 67 (87)
T ss_dssp SHHHHHHTTSCHHHHHHHHHHHTTTTSS---------------C-------CCHHHHHHHHTCCHHHHHHHHHHHHHHHB
T ss_pred HHHHHHHHhCCHHHHHHHHHHHccCCCC---------------C-------CCHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 34555554 3466777777764211 1 25679999999999999999999999996
Q ss_pred h
Q 005023 399 D 399 (718)
Q Consensus 399 ~ 399 (718)
.
T Consensus 68 ~ 68 (87)
T 1tty_A 68 H 68 (87)
T ss_dssp T
T ss_pred H
Confidence 5
No 375
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=38.35 E-value=27 Score=32.89 Aligned_cols=36 Identities=8% Similarity=-0.209 Sum_probs=21.2
Q ss_pred CCCcEEEeCCCCceeecccccCCCCCCCcccHHHHHHH
Q 005023 75 GWPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRK 112 (718)
Q Consensus 75 GwP~~vfl~p~g~p~~~~~y~p~~~~~~~~~f~~~L~~ 112 (718)
..|.+++++ ||++.+...+-.+. .....+-..+|+.
T Consensus 137 ~~r~tfvID-dG~I~~~~v~~~~~-g~~~~~~~~vl~~ 172 (173)
T 3mng_A 137 LKRFSMVVQ-DGIVKALNVEPDGT-GLTCSLAPNIISQ 172 (173)
T ss_dssp BCCEEEEEE-TTEEEEEEECTTSS-CSSTTSHHHHHHH
T ss_pred eEEEEEEEE-CCEEEEEEEeCCCC-CcchHHHHHHHHh
Confidence 469999999 99988754332111 1223456666653
No 376
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=38.24 E-value=45 Score=32.52 Aligned_cols=36 Identities=31% Similarity=0.385 Sum_probs=23.6
Q ss_pred CCcEEEeCCCCceeecccccCCCCCCCcccHHHHHHHHHH
Q 005023 76 WPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRKVKD 115 (718)
Q Consensus 76 wP~~vfl~p~g~p~~~~~y~p~~~~~~~~~f~~~L~~i~~ 115 (718)
+|.+++++|+|+......| |.. .| ..+-++|+.|..
T Consensus 128 ~p~~flID~~G~I~~~~~~-~~~--~g-~~~~ell~~i~~ 163 (220)
T 1xcc_A 128 CRCLFFISPEKKIKATVLY-PAT--TG-RNAHEILRVLKS 163 (220)
T ss_dssp CEEEEEECTTSBEEEEEEE-CTT--BC-CCHHHHHHHHHH
T ss_pred cceEEEECCCCEEEEEEec-CCC--CC-CCHHHHHHHHHH
Confidence 7999999999999875543 211 11 256677766643
No 377
>3qxf_A Endoglucanase; cellulase, GH8, cellulose synthesis, cellulose degradation,; 1.85A {Escherichia coli k-12} PDB: 3qxq_A*
Probab=37.99 E-value=46 Score=35.44 Aligned_cols=89 Identities=15% Similarity=0.104 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCC-eEEEeecCCCCC---CCCCcccH
Q 005023 419 GLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTH-RLQHSFRNGPSK---APGFLDDY 494 (718)
Q Consensus 419 gl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g-~l~~~~~~g~~~---~~~~l~Dy 494 (718)
-+++.||.+|++.-++ +.|...|+++++-|.++...+..| +..- .-|... .....-+=
T Consensus 98 l~IA~ALl~A~~~Wg~----------------~~Y~~~A~~il~~I~~~~v~~~~g~~~~L--lpG~~gF~~~~~~~~nP 159 (355)
T 3qxf_A 98 VWMAWSLLEAGRLWKE----------------QRYTDIGSALLKRIAREEVVTVPGLGSML--LPGKVGFAEDNSWRFNP 159 (355)
T ss_dssp HHHHHHHHHHHHHTTC----------------HHHHHHHHHHHHHHHHHHEEEETTTEEEE--CSSSSSSEETTEEEECT
T ss_pred HHHHHHHHHHHHHhCC----------------HHHHHHHHHHHHHHHHhccccCCCCceee--cCcccCccCCCCCeech
Confidence 4788999999999997 789999999999998876553323 2211 111100 00101112
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Q 005023 495 AFLISGLLDLYEFGSGTKWLVWAIELQNTQDE 526 (718)
Q Consensus 495 A~li~all~LYeaTgd~~~L~~A~~L~~~~~~ 526 (718)
++++-++++++... +..|.+.+..-.+.+.+
T Consensus 160 SY~~p~~~~~fa~~-~~~W~~l~~~~~~lL~~ 190 (355)
T 3qxf_A 160 SYLPPTLAQYFTRF-GAPWTTLRETNQRLLLE 190 (355)
T ss_dssp TSSCHHHHHHHGGG-CTTHHHHHHHHHHHHHH
T ss_pred hhccHHHHHHHHHh-CChHHHHHHHHHHHHHH
Confidence 33445667666655 78899988888877765
No 378
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=37.18 E-value=39 Score=33.06 Aligned_cols=16 Identities=13% Similarity=0.154 Sum_probs=12.0
Q ss_pred CCCcEEEeCCCCceeec
Q 005023 75 GWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 75 GwP~~vfl~p~g~p~~~ 91 (718)
+.|+++++ ++|+..+.
T Consensus 124 ~~p~t~li-~~G~i~~~ 139 (241)
T 1nm3_A 124 SWRYSMLV-KNGVVEKM 139 (241)
T ss_dssp ECCEEEEE-ETTEEEEE
T ss_pred ceeEEEEE-ECCEEEEE
Confidence 34888888 88888754
No 379
>3q7a_B Farnesyltransferase beta subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_B* 3q78_B* 3q79_B* 3q75_B* 3q7f_B* 3sfx_B* 3sfy_B*
Probab=37.00 E-value=1.9e+02 Score=32.27 Aligned_cols=27 Identities=30% Similarity=0.421 Sum_probs=19.7
Q ss_pred CCHHHHHHHHHHHHhcccccCCCCCCCC
Q 005023 152 LPQNALRLCAEQLSKSYDSRFGGFGSAP 179 (718)
Q Consensus 152 ~~~~~~~~~~~~l~~~~D~~~GGfg~ap 179 (718)
++.+..+++++.+.+... ..|||++.|
T Consensus 106 ld~~~~~~~I~~Ils~Q~-~dGGFgg~p 132 (520)
T 3q7a_B 106 LDQGTKDRVVSTLLHFLS-PKGGFGGGP 132 (520)
T ss_dssp CCHHHHHHHHHHHHTTBC-TTSSBCSSC
T ss_pred CChHHHHHHHHHHHHHcC-CCCCCCCCC
Confidence 345567778888876554 579999987
No 380
>2wy7_A Complement C3D fragment; immune system, immune response, innate immunity, complement inflammatory response; 1.70A {Homo sapiens} PDB: 2wy8_A 3oed_A 3oxu_A 3rj3_A 1ghq_A* 1w2s_A
Probab=36.69 E-value=3.5e+02 Score=27.38 Aligned_cols=121 Identities=11% Similarity=-0.006 Sum_probs=65.2
Q ss_pred HHHHHHHHHHhcccccCCCCCCCCCCCChhHH-HHHHHhhhhhcccCCCCCCHHHHHHHHHHHHHHHhCCCcccCCCcEE
Q 005023 156 ALRLCAEQLSKSYDSRFGGFGSAPKFPRPVEI-QMMLYHSKKLEDTGKSGEASEGQKMVLFTLQCMAKGGIHDHVGGGFH 234 (718)
Q Consensus 156 ~~~~~~~~l~~~~D~~~GGfg~apKFP~~~~l-~~Ll~~~~~~~~~~~~~~~~~~~~~~~~TL~~m~~gGi~D~v~GGF~ 234 (718)
.+++.++.+.. +-...|||+.-+.-|....+ .+.+.......... ..++ +++.++++-+.. -.-+-+|+|.
T Consensus 55 ~i~~g~~~~l~-~q~~dGgf~~f~~~~~s~wlTa~v~~~l~~a~~~~--~v~~---~~i~~a~~~L~~--~~Q~~dGsf~ 126 (310)
T 2wy7_A 55 LIKKGYTQQLA-FRQPSSAFAAFVKRAPSTWLTAYVVKVFSLAVNLI--AIDS---QVLCGAVKWLIL--EKQKPDGVFQ 126 (310)
T ss_dssp HHHHHHHHHHT-TBCTTSCBCSSTTSCCCHHHHHHHHHHHHHHTTTS--CCCH---HHHHHHHHHHHH--HHBCTTSCBC
T ss_pred HHHHHHHHHHH-hcCCCCCcccCCCCCccHHHHHHHHHHHHHHHhcC--CCCH---HHHHHHHHHHHH--hhcCCCCccc
Confidence 35555666664 45668999875554432222 22222221111111 1223 344555555541 0122356665
Q ss_pred EEecCCCCCCCCCc----------chHHHHHHHHHHHHHHHHcc--CChHHHHHHHHHHHHHHHhcc
Q 005023 235 RYSVDERWHVPHFE----------KMLYDQGQLANVYLDAFSLT--KDVFYSYICRDILDYLRRDMI 289 (718)
Q Consensus 235 RYsvD~~W~vPHFE----------KmLyDnA~ll~~ya~Ay~~t--~~~~y~~~A~~~~~~l~~~m~ 289 (718)
. .|.+.|-+ .-++-.|..+.++.++.... +-+.....++++++||.+...
T Consensus 127 ~-----~~~~~~~~~~g~~~~~~~~~~~~ta~vl~aL~~~~~~~~~~~~~~~~~i~~A~~~L~~~~~ 188 (310)
T 2wy7_A 127 E-----DAPVIHQEMIGGLRNNNEKDMALTAFVLISLQEAKDICEEQVNSLPGSITKAGDFLEANYM 188 (310)
T ss_dssp C-----SSCCSCGGGGGGGTTCSCHHHHHHHHHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHHHHGG
T ss_pred c-----CCCccCHhhcCCcccccccccchHHHHHHHHHhcccccccCCcchHHHHHHHHHHHHHHhh
Confidence 3 56665543 22566889999998886653 334566788999999998653
No 381
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=36.68 E-value=29 Score=32.27 Aligned_cols=16 Identities=6% Similarity=0.059 Sum_probs=10.2
Q ss_pred cCCcE-EE---EcCCchhhh
Q 005023 12 TRRTH-FL---INTCHWCHV 27 (718)
Q Consensus 12 e~K~i-i~---y~~C~wChv 27 (718)
.+|++ +. .+||+.|..
T Consensus 42 ~gk~vvl~~~~a~wcp~C~~ 61 (171)
T 2pwj_A 42 KDKKVVIFGLPGAYTGVCSS 61 (171)
T ss_dssp TTSEEEEEECSCTTCTTHHH
T ss_pred CCCCEEEEEecCCCCCCCCH
Confidence 45544 33 378999976
No 382
>2sqc_A Squalene-hopene cyclase; isomerase, triterpene cyclase, monotopic membrane protein, QW-sequence, repeat; HET: C8E; 2.00A {Alicyclobacillus acidocaldarius} SCOP: a.102.4.2 a.102.4.2 PDB: 3sqc_A 1ump_A* 1h35_A* 1h36_A* 1h37_A* 1h39_A* 1h3a_A* 1h3b_A* 1h3c_A* 1o6h_A* 1o6q_A* 1gsz_A* 1o79_A* 1sqc_A* 1o6r_A*
Probab=36.68 E-value=71 Score=36.51 Aligned_cols=95 Identities=12% Similarity=-0.036 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEeecCCCCC---------CC
Q 005023 418 NGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPSK---------AP 488 (718)
Q Consensus 418 Ngl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~~g~~~---------~~ 488 (718)
.++++.||..++.... -...+++.+||.+...+. .|.+-..++++.+. ..
T Consensus 314 ta~~l~AL~~~G~~~~--------------------~~~~~ka~~~L~~~q~~~-~g~~~~~~~~~s~GgW~f~~~~~~~ 372 (631)
T 2sqc_A 314 TGLAVLALRAAGLPAD--------------------HDRLVKAGEWLLDRQITV-PGDWAVKRPNLKPGGFAFQFDNVYY 372 (631)
T ss_dssp HHHHHHHHHHTTCCTT--------------------CHHHHHHHHHHHHTCCCS-CCGGGGTCTTSCCCCBCSSSSCTTC
T ss_pred HHHHHHHHHHcCCCCC--------------------CHHHHHHHHHHHHhcCCC-CCChhhhcCCCCCCCCccccCCCCC
Confidence 3677888877763211 135667788888876542 23211112222221 12
Q ss_pred CCcccHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcccccCCcc
Q 005023 489 GFLDDYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDREGGGY 536 (718)
Q Consensus 489 ~~l~DyA~li~all~LYeaTgd~~~L~~A~~L~~~~~~~F~D~~~Gg~ 536 (718)
+-.+|-|+.+.+|+.+.. ..+..+.+...+..+.+...- . .+|||
T Consensus 373 p~v~dTA~al~AL~~~~~-~~~~~~~~~l~~a~~wLls~Q-~-~dGgf 417 (631)
T 2sqc_A 373 PDVCDTAVVVWALNTLRL-PDERRRRDAMTKGFRWIVGMQ-S-SNGGW 417 (631)
T ss_dssp CBHHHHHHHHHHHTTCCC-SCHHHHHHHHHHHHHHHHHTC-C-TTSCB
T ss_pred CchHHHHHHHHHHHHcCC-CccchhHHHHHHHHHHHHhhc-C-CCCCC
Confidence 346788999999888764 333445556666666666543 2 24666
No 383
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=35.09 E-value=2.7e+02 Score=30.81 Aligned_cols=113 Identities=16% Similarity=0.154 Sum_probs=61.6
Q ss_pred CcccHHHHHHHHHHHHHHcCChH-----HHHHHHHHHHHHHHhccccc-CCccccCC---CCCCc--------------c
Q 005023 490 FLDDYAFLISGLLDLYEFGSGTK-----WLVWAIELQNTQDELFLDRE-GGGYFNTT---GEDPS--------------V 546 (718)
Q Consensus 490 ~l~DyA~li~all~LYeaTgd~~-----~L~~A~~L~~~~~~~F~D~~-~Gg~f~t~---~~~~~--------------l 546 (718)
-+|-.|+.+.++-.+|+.|||.. |....+.+++.+.+...++. .|-|-+.- ...++ +
T Consensus 178 ElDSla~~L~la~~Yy~~TgD~~~f~~~w~~av~~il~~l~~eq~~~~~~~~Y~F~r~t~~~~dtl~~~G~G~pv~~tGL 257 (489)
T 2p0v_A 178 EIDSLCYPIRLAYHYWKTTGDASVFSDEWLQAIANVLKTFKEQQRKDDAKGPYRFQRKTERALDTMTNDGWGNPVKPVGL 257 (489)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCCTTSSHHHHHHHHHHHHHHHHTTCSSCSSCSCCCCCCBSCGGGSCHHHHTCSCCCCSSC
T ss_pred hhhhhHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHhcccCCCCCceEeecCCCcccccccCCCCCccCCCCc
Confidence 46778999999999999999765 45566677777766554432 24444421 00011 1
Q ss_pred ccccccCCCCCC-----CChHHHHHHHHHHHHHHhCCC-CchHHHHHHHHHHHHHHHHHHhh
Q 005023 547 LLRVKEDHDGAE-----PSGNSVSVINLVRLASIVAGS-KSDYYRQNAEHSLAVFETRLKDM 602 (718)
Q Consensus 547 ~~r~k~~~D~a~-----PS~ns~~a~~LlrL~~lt~~~-~~~~y~e~a~~~l~~~~~~i~~~ 602 (718)
+..-.-..|.++ -.+|..+...|-+++.+...- .+....++++++...+..-|.++
T Consensus 258 i~S~fRPSDDa~~yg~~ipSN~~a~v~L~~aaeia~~v~~d~~la~~~~~lA~eI~~gI~~~ 319 (489)
T 2p0v_A 258 IASAFRPSDDATTFQFLVPSNFFAVTSLRKAAEILNTVNRKPALAKECTALADEVEKALKKY 319 (489)
T ss_dssp CCCSBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeCCCCCCCcchhcCcchHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHh
Confidence 100001112222 116777777888887775321 12445555555555555545443
No 384
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=32.96 E-value=53 Score=33.59 Aligned_cols=63 Identities=11% Similarity=0.134 Sum_probs=31.3
Q ss_pred EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCCC-----------CcchHHHHHHHHHHhcCCCCC--CcEEEeCCC
Q 005023 19 INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDREE-----------RPDVDKVYMTYVQALYGGGGW--PLSVFLSPD 85 (718)
Q Consensus 19 y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~ee-----------~pd~d~~y~~~~q~~~g~~Gw--P~~vfl~p~ 85 (718)
..+|++|...+ ..++.... +...|++.++.++ +|+.... +...+..+|..+. |..+| +
T Consensus 51 s~gCp~C~~Ak-~lL~~~~~----~~~vi~l~~~v~~~dylgw~D~~a~~~~~~r-~~~~~~~~G~~tVyTPqI~I---n 121 (270)
T 2axo_A 51 SQGCASCPPAD-EALRKMIQ----KGDVVGLSYHVDYWNYLGWTDSLASKENTER-QYGYMRALGRNGVYTPQAIL---N 121 (270)
T ss_dssp CTTCTTCHHHH-HHHHHHHH----HTSSEEEEEECSTTCSSSSCCTTCCHHHHHH-HHHHHHHTTCSCCCSSEEEE---T
T ss_pred CCCCCChHHHH-HHHHHhhc----cCCeeeEEEEEEEecccccccchhhhhhhHH-HHHHHHHhCCCcccCCEEEE---C
Confidence 48999999754 33333321 2346644443322 2222111 1112223577767 98666 6
Q ss_pred Cceee
Q 005023 86 LKPLM 90 (718)
Q Consensus 86 g~p~~ 90 (718)
|+...
T Consensus 122 g~~~v 126 (270)
T 2axo_A 122 GRDHV 126 (270)
T ss_dssp TTEEE
T ss_pred CEEee
Confidence 77543
No 385
>1hzf_A Complement factor C4A; alpha-alpha 6 barrel, immune system; 2.30A {Homo sapiens} SCOP: a.102.4.4
Probab=32.81 E-value=71 Score=33.78 Aligned_cols=77 Identities=6% Similarity=0.049 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHHHhCCCcccCCCcEEEEecCCCCCCCCCcchHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHH
Q 005023 207 SEGQKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRR 286 (718)
Q Consensus 207 ~~~~~~~~~TL~~m~~gGi~D~v~GGF~RYsvD~~W~vPHFEKmLyDnA~ll~~ya~Ay~~t~~~~y~~~A~~~~~~l~~ 286 (718)
+++.+.+...++.+.. +-+-+|||.-|..+ .--.|..|..+.+++.+-..... -..+.+++++||.+
T Consensus 87 ~~~~~~i~~g~~~ll~---~Q~~dGgf~~~~~~--------~~~~~lTa~v~~~l~~a~~~~~v--~~~~i~~a~~~L~~ 153 (367)
T 1hzf_A 87 DHAVDLIQKGYMRIQQ---FRKADGSYAAWLSR--------DSSTWLTAFVLKVLSLAQEQVGG--SPEKLQETSNWLLS 153 (367)
T ss_dssp HHHHHHHHHHHHHHHT---TBCTTSCBCSSTTS--------CCCHHHHHHHHHHHHHHGGGTCC--CHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHh---ccCCCCCeeccCCC--------CCcHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHH
Confidence 4667788888888875 45668999643322 11347789999999998765332 24678899999988
Q ss_pred hccCCCCceee
Q 005023 287 DMIGPGGEIFS 297 (718)
Q Consensus 287 ~m~~p~Ggf~s 297 (718)
.+.++|+|+.
T Consensus 154 -~Q~~dG~~~~ 163 (367)
T 1hzf_A 154 -QQQADGSFQD 163 (367)
T ss_dssp -GBCTTSCBCC
T ss_pred -hhccCCCccc
Confidence 5678899875
No 386
>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A*
Probab=32.32 E-value=46 Score=37.38 Aligned_cols=49 Identities=12% Similarity=0.130 Sum_probs=36.6
Q ss_pred ccHHHHHHH---HHHHHHHcCCh----HHHHHHHHHHHHHHHhcccccCCccccCC
Q 005023 492 DDYAFLISG---LLDLYEFGSGT----KWLVWAIELQNTQDELFLDREGGGYFNTT 540 (718)
Q Consensus 492 ~DyA~li~a---ll~LYeaTgd~----~~L~~A~~L~~~~~~~F~D~~~Gg~f~t~ 540 (718)
|=.|++..+ +.++++..|+. +|.+.|.++.+.+.++|||++.|.||+..
T Consensus 306 DlnA~ly~a~~~la~lA~~lG~~~~a~~~~~~A~~lk~ai~~~fWdee~G~y~D~~ 361 (535)
T 2jg0_A 306 DLNSLMFKMEKILARASKAAGDNAMANQYETLANARQKGIEKYLWNDQQGWYADYD 361 (535)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHSEETTTTEECCEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcCCCCCEEEEEe
Confidence 335554444 45566677765 58999999999999999999888887643
No 387
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=32.19 E-value=24 Score=34.82 Aligned_cols=21 Identities=19% Similarity=0.137 Sum_probs=18.2
Q ss_pred cCCCCCCcEEEeCCCCceeec
Q 005023 71 YGGGGWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 71 ~g~~GwP~~vfl~p~g~p~~~ 91 (718)
.|+.|.|+.+|.+++|+.+.|
T Consensus 167 ~GV~GtPtfvv~~~nG~~~~G 187 (226)
T 3f4s_A 167 LGITAVPIFFIKLNDDKSYIE 187 (226)
T ss_dssp HCCCSSCEEEEEECCTTCCCC
T ss_pred cCCCcCCEEEEEcCCCEEeeC
Confidence 589999999999999998754
No 388
>1wu4_A Xylanase Y; (alpla/alpha)6 barrel, glycoside hydrolase family 8, hydrola; 1.35A {Bacillus halodurans} SCOP: a.102.1.2 PDB: 1wu5_A* 3a3v_A 2drr_A 2drs_A 1wu6_A* 2drq_A 2dro_A
Probab=31.16 E-value=67 Score=34.64 Aligned_cols=101 Identities=12% Similarity=0.007 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEeecCCCC----CCCCCcccH
Q 005023 419 GLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGPS----KAPGFLDDY 494 (718)
Q Consensus 419 gl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~~g~~----~~~~~l~Dy 494 (718)
-.++.||..|++.-++. +| +..+|.+.|+++++.|.++-.....+.++ .-|.. ...+..-+=
T Consensus 131 l~IA~ALl~A~~~Wg~~----------~g-~~~~Y~~~A~~il~~i~~~~~~~~~~~~l---~p~~~~~~f~~~~~~~np 196 (396)
T 1wu4_A 131 EYFALALFFASHRWGDG----------DE-QPFNYSEQARKLLHTCVHNGEGGPGHPMW---NRDNKLIKFIPEVEFSDP 196 (396)
T ss_dssp HHHHHHHHHHHHHHCCC----------SS-TTCCHHHHHHHHHHHHHHTTSSSSCCCSB---CTTTCCBCSSTTCSEECG
T ss_pred HHHHHHHHHHHHHhCCC----------CC-CcHHHHHHHHHHHHHHHHhhccCCCccee---cCCCceeeecCCCCeeCh
Confidence 47889999999999841 00 01579999999999999876542111111 00000 000111222
Q ss_pred HHHHHHHHHHHH----HcCChHHHHHHHHHHHHHHHhcccccCC
Q 005023 495 AFLISGLLDLYE----FGSGTKWLVWAIELQNTQDELFLDREGG 534 (718)
Q Consensus 495 A~li~all~LYe----aTgd~~~L~~A~~L~~~~~~~F~D~~~G 534 (718)
++.+-++.+++. .++++.|.+.+....+.+.+... +..|
T Consensus 197 SY~~pa~~~~fa~~~~~~~~~~W~~~~~~~~~lL~~~~~-~~tG 239 (396)
T 1wu4_A 197 SYHLPHFYELFSLWANEEDRVFWKEAAEASREYLKIACH-PETG 239 (396)
T ss_dssp GGCCHHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHHSC-TTTC
T ss_pred hhccHHHHHHHHHhcccccChhHHHHHHHHHHHHHhccc-CCCC
Confidence 344457788755 55677899999888877766543 3344
No 389
>2o8x_A Probable RNA polymerase sigma-C factor; promoter recognition, transcription regulation, helix-turn-H motif, transcription; 3.00A {Mycobacterium tuberculosis}
Probab=31.05 E-value=41 Score=25.79 Aligned_cols=29 Identities=17% Similarity=0.274 Sum_probs=26.5
Q ss_pred CchHHHHhcCCCHHHHHHHHHHHHHHHHh
Q 005023 371 DSSASASKLGMPLEKYLNILGECRRKLFD 399 (718)
Q Consensus 371 ~~~~~a~~~g~~~~~~~~~l~~~r~~L~~ 399 (718)
+..++|+.+|+++..+...+..++++|..
T Consensus 33 s~~eIA~~lgis~~tv~~~~~ra~~~l~~ 61 (70)
T 2o8x_A 33 SYADAAAVCGCPVGTIRSRVARARDALLA 61 (70)
T ss_dssp CHHHHHHHHTSCHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHCcCHHHHHHHHHHHHHHHHH
Confidence 46789999999999999999999999975
No 390
>3hug_A RNA polymerase sigma factor; ECF sigma factor, zinc binding anti-sigma factor, oxidative transcription regulation; 2.35A {Mycobacterium tuberculosis}
Probab=30.70 E-value=44 Score=27.65 Aligned_cols=30 Identities=20% Similarity=0.115 Sum_probs=26.9
Q ss_pred CchHHHHhcCCCHHHHHHHHHHHHHHHHhh
Q 005023 371 DSSASASKLGMPLEKYLNILGECRRKLFDV 400 (718)
Q Consensus 371 ~~~~~a~~~g~~~~~~~~~l~~~r~~L~~~ 400 (718)
+..++|+.+|++...+...+..++++|...
T Consensus 55 s~~eIA~~lgis~~tV~~~l~ra~~~Lr~~ 84 (92)
T 3hug_A 55 STAQIATDLGIAEGTVKSRLHYAVRALRLT 84 (92)
T ss_dssp CHHHHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHCcCHHHHHHHHHHHHHHHHHH
Confidence 567999999999999999999999999763
No 391
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=30.34 E-value=21 Score=32.70 Aligned_cols=34 Identities=12% Similarity=0.060 Sum_probs=21.7
Q ss_pred CCcEEEeCCCCceeeccc-ccCCCCCCCcccHHHHHHHH
Q 005023 76 WPLSVFLSPDLKPLMGGT-YFPPEDKYGRPGFKTILRKV 113 (718)
Q Consensus 76 wP~~vfl~p~g~p~~~~~-y~p~~~~~~~~~f~~~L~~i 113 (718)
.|.+++++++|+..+... +-+. ..+.+.++|+.+
T Consensus 130 ~p~~~liD~~G~i~~~~~~~~~~----~~~~~~~~l~~l 164 (165)
T 1q98_A 130 SRAVIVLDEQNNVLHSQLVEEIK----EEPNYEAALAVL 164 (165)
T ss_dssp CCEEEEECTTSBEEEEEECSBTT----SCCCHHHHHHTT
T ss_pred ceeEEEEcCCCEEEEEEeCCCCC----CCCCHHHHHHhh
Confidence 499999999999886431 1111 134677766643
No 392
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A*
Probab=30.28 E-value=3.3e+02 Score=31.70 Aligned_cols=51 Identities=20% Similarity=0.301 Sum_probs=34.1
Q ss_pred HHHHHHH---HHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEee
Q 005023 418 NGLVISS---FARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSF 480 (718)
Q Consensus 418 Ngl~I~A---La~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~ 480 (718)
|+++..| +++.++.+|+... .++|.+.|.++.+.+.+++|+++.+.+.+.+
T Consensus 505 ~a~~y~al~~~a~la~~lG~~~~------------a~~~~~~A~~lk~~~~~~~w~~~~~~f~~~~ 558 (807)
T 1v7w_A 505 SFLHFWALQEFIDLAKFLGKDQD------------VNTYTEMAANVREACETHLWDDEGGWYIRGL 558 (807)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHH------------HHHHHHHHHHHHHHHHHHSEETTTTEECCEE
T ss_pred HHHHHHHHHHHHHHHHHcCCHHH------------HHHHHHHHHHHHHHHHHhccCCCCCeeeeee
Confidence 5665554 4555566665211 1579999999999999999997655444443
No 393
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=29.85 E-value=29 Score=35.59 Aligned_cols=28 Identities=11% Similarity=0.204 Sum_probs=18.4
Q ss_pred hcCCcEE---EEcCCchhhhhhccccCcHHHHHHhhc
Q 005023 11 KTRRTHF---LINTCHWCHVMEVESFEDEGVAKLLND 44 (718)
Q Consensus 11 ~e~K~ii---~y~~C~wChvM~~esf~d~~va~~ln~ 44 (718)
+++|.+| ....|++||.+.+ ++.+.+++
T Consensus 145 ~~gk~~I~vFtDp~CPYCkkl~~------~l~~~l~~ 175 (273)
T 3tdg_A 145 ANKDKILYIVSDPMCPHCQKELT------KLRDHLKE 175 (273)
T ss_dssp GGTTCEEEEEECTTCHHHHHHHH------THHHHHHH
T ss_pred CCCCeEEEEEECcCChhHHHHHH------HHHHHhhC
Confidence 3455543 3589999999974 45556654
No 394
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=29.46 E-value=25 Score=31.20 Aligned_cols=60 Identities=12% Similarity=0.170 Sum_probs=33.9
Q ss_pred EEEEcCCchhhhhhccccCcHHHHHHhhcccEEE-EecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCcee
Q 005023 16 HFLINTCHWCHVMEVESFEDEGVAKLLNDWFVSI-KVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPL 89 (718)
Q Consensus 16 ii~y~~C~wChvM~~esf~d~~va~~ln~~Fv~v-kvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p~ 89 (718)
|+++++|.+|+.-. ++|+++=|.+ .+|..+.|.-.......++. .|+|..-+++..|..+
T Consensus 8 iY~~p~C~~c~ka~----------~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~----~g~~~~~l~n~~~~~~ 68 (120)
T 3gkx_A 8 FLQYPACSTCQKAK----------KWLIENNIEYTNRLIVDDNPTVEELKAWIPL----SGLPVKKFFNTSGVVY 68 (120)
T ss_dssp EEECTTCHHHHHHH----------HHHHHTTCCCEEEETTTTCCCHHHHHHHHHH----HTSCGGGGBCTTSHHH
T ss_pred EEECCCChHHHHHH----------HHHHHcCCceEEEecccCcCCHHHHHHHHHH----cCCCHHHeEeCCCchh
Confidence 35679999999844 4666543333 25555554433333333333 3777777777765544
No 395
>1l9z_H Sigma factor SIGA; helix-turn-helix, coiled-coil, transcription/DNA complex; 6.50A {Thermus aquaticus} SCOP: i.8.1.1
Probab=29.26 E-value=52 Score=36.07 Aligned_cols=53 Identities=23% Similarity=0.212 Sum_probs=40.4
Q ss_pred HHHHHhc----hhHHHHHHHhcccCCCCcCCCCCCCCCCccCCcceeeccCCchHHHHhcCCCHHHHHHHHHHHHHHHH
Q 005023 324 EVEDILG----EHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIELNDSSASASKLGMPLEKYLNILGECRRKLF 398 (718)
Q Consensus 324 Ei~~~L~----~~~~~~~~~~~v~~~Gn~~~~~~~dp~~~~eg~nvL~~~~~~~~~a~~~g~~~~~~~~~l~~~r~~L~ 398 (718)
+|.++|. .+..++.-+|++.... ..+.+++|+.+|++.+.++.++..+++||+
T Consensus 368 ~L~~aL~~L~ereR~VI~LRygL~~~e----------------------~~TleEIAe~LgIS~erVRqi~~RAlkKLR 424 (438)
T 1l9z_H 368 ELEKALSKLSEREAMVLKLRKGLIDGR----------------------EHTLEEVGAYFGVTRERIRQIENKALRKLK 424 (438)
T ss_pred HHHHHHHhCCHHHHHHHHHHHhccCCC----------------------CCCHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 4455554 2456788888886321 135789999999999999999999999998
No 396
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=29.09 E-value=18 Score=33.22 Aligned_cols=61 Identities=8% Similarity=0.078 Sum_probs=36.1
Q ss_pred EEEEcCCchhhhhhccccCcHHHHHHhhcccEE-EEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCceee
Q 005023 16 HFLINTCHWCHVMEVESFEDEGVAKLLNDWFVS-IKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLM 90 (718)
Q Consensus 16 ii~y~~C~wChvM~~esf~d~~va~~ln~~Fv~-vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p~~ 90 (718)
|+++++|.+|+.-. ++|+++=|. ..+|..+.|.-........ +..|||..-+++..|..+.
T Consensus 6 iY~~p~C~~crkak----------~~L~~~gi~~~~idi~~~~~~~~eL~~~~----~~~g~p~~~l~n~~~~~yk 67 (141)
T 1s3c_A 6 IYHNPASGTSRNTL----------EMIRNSGTEPTIILYLENPPSRDELVKLI----ADMGISVRALLRKNVEPYE 67 (141)
T ss_dssp EECCTTCHHHHHHH----------HHHHHTTCCCEEECTTTSCCCHHHHHHHH----HHHTSCHHHHBCSSSHHHH
T ss_pred EEECCCChHHHHHH----------HHHHHcCCCEEEEECCCCCccHHHHHHHh----cccCCCHHHhccCCchhHH
Confidence 45569999999743 566654333 2456555443333333332 3348998888888776664
No 397
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=28.45 E-value=37 Score=30.97 Aligned_cols=16 Identities=19% Similarity=0.312 Sum_probs=12.8
Q ss_pred CCcEEEeCCCCceeecc
Q 005023 76 WPLSVFLSPDLKPLMGG 92 (718)
Q Consensus 76 wP~~vfl~p~g~p~~~~ 92 (718)
.|.+++++ +|+..+..
T Consensus 128 ~p~~~vid-~G~i~~~~ 143 (162)
T 1tp9_A 128 RRFALLVD-DLKVKAAN 143 (162)
T ss_dssp CCEEEEEE-TTEEEEEE
T ss_pred eeEEEEEE-CCEEEEEE
Confidence 78888888 99887643
No 398
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}
Probab=26.76 E-value=84 Score=36.58 Aligned_cols=56 Identities=13% Similarity=0.272 Sum_probs=39.0
Q ss_pred hHHHHHH---HHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEeecCCC
Q 005023 417 WNGLVIS---SFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHSFRNGP 484 (718)
Q Consensus 417 WNgl~I~---ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~~~~g~ 484 (718)
-|+++.. .+++.++++|+... .++|.+.|.++.+.+.+++|+++.|.+...+.+|.
T Consensus 456 ~~a~~y~al~~~a~lA~~lG~~~~------------A~~y~~~A~~lk~a~~~~~wd~~~G~y~~~~~~G~ 514 (739)
T 3cih_A 456 EQVLFCRSLETMALCADLVGDKDG------------QQKYEKLASALKAKLEPTFWNNQKQAFVHNCVDGR 514 (739)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHH------------HHHHHHHHHHHHHHHHHHHEETTTTEECSEEETTE
T ss_pred HHHHHHHHHHHHHHHHHHcCChHH------------HHHHHHHHHHHHHHHHHhccCcccCeeEeecCCCC
Confidence 3555544 55666677776311 15799999999999999999987777665555553
No 399
>4gl3_A Putative glucoamylase; PF10091 family protein, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 2.01A {Bacteroides uniformis}
Probab=26.30 E-value=2e+02 Score=31.34 Aligned_cols=92 Identities=14% Similarity=0.144 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHH-HhccccCCCeEEEee--cCCCCCCCCC-----
Q 005023 419 GLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIR-RHLYDEQTHRLQHSF--RNGPSKAPGF----- 490 (718)
Q Consensus 419 gl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~-~~~~d~~~g~l~~~~--~~g~~~~~~~----- 490 (718)
|+.+.|+.-|... |= +++.+.++..+++.+||. +.+ +.-.|-++|=+ +.|++..+..
T Consensus 58 Gf~L~a~~va~e~-G~-------------I~~~e~~~R~~~tL~~l~~~~~-~r~~G~fyhwyd~~Tg~~l~~~~~d~~v 122 (424)
T 4gl3_A 58 GFGVMAIIVGIER-GF-------------VTREQGAERMLKIVRFLSDKNT-DSYHGMWAHWMNGKTGKTIPFSRKDDGA 122 (424)
T ss_dssp HHHHHHHHHHHHT-TS-------------SCHHHHHHHHHHHHHHHHCTTS-CCBTTBCCSEEETTTCCEECSBTTBCSE
T ss_pred HHHHHHHHHHHHc-CC-------------CCHHHHHHHHHHHHHHHhhccc-cccCCccccceeCCCCCCCCCcCCCCcc
Confidence 7777777777652 10 123678899999999985 333 22246676633 2333322222
Q ss_pred -cccHHHHHHHHHHHHHHcCC-----hHHHHHHHHHHHHHH
Q 005023 491 -LDDYAFLISGLLDLYEFGSG-----TKWLVWAIELQNTQD 525 (718)
Q Consensus 491 -l~DyA~li~all~LYeaTgd-----~~~L~~A~~L~~~~~ 525 (718)
+=|-++++.+||.+-+...+ ++-.++|.+|++.++
T Consensus 123 StVDtg~L~~gLl~~~~yf~~~~~~e~~l~~~a~~L~~~~d 163 (424)
T 4gl3_A 123 DIVESAFMFEGLLAAHQYFTKDNPTENRIRGIINNLWRQAE 163 (424)
T ss_dssp EHHHHHHHHHHHHHHHHHCCCSSHHHHHHHHHHHHHHHHCC
T ss_pred cHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHcCC
Confidence 23789999999999988765 345566666666554
No 400
>2p7v_B Sigma-70, RNA polymerase sigma factor RPOD; RSD, regulator of sigma 70, sigma 70 domain 4, transcription, regulation, helix-turn-helix; 2.60A {Escherichia coli} SCOP: a.4.13.2
Probab=26.15 E-value=41 Score=26.14 Aligned_cols=29 Identities=17% Similarity=0.177 Sum_probs=26.5
Q ss_pred CchHHHHhcCCCHHHHHHHHHHHHHHHHh
Q 005023 371 DSSASASKLGMPLEKYLNILGECRRKLFD 399 (718)
Q Consensus 371 ~~~~~a~~~g~~~~~~~~~l~~~r~~L~~ 399 (718)
+..++|+.+|++...+...+..++++|..
T Consensus 27 s~~eIA~~lgis~~tV~~~~~ra~~kLr~ 55 (68)
T 2p7v_B 27 TLEEVGKQFDVTRERIRQIEAKALRKLRH 55 (68)
T ss_dssp CHHHHHHHHTCCHHHHHHHHHHHHHGGGS
T ss_pred CHHHHHHHHCcCHHHHHHHHHHHHHHHHH
Confidence 56799999999999999999999999975
No 401
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=25.57 E-value=3.7e+02 Score=29.76 Aligned_cols=103 Identities=13% Similarity=0.098 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccC-CC-----------------------
Q 005023 419 GLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQ-TH----------------------- 474 (718)
Q Consensus 419 gl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~-~g----------------------- 474 (718)
|..|.++...++.+||... | .+.|.++.+.+++++.++..+++ .|
T Consensus 183 a~~L~la~~Yy~~TgD~~~---f--------~~~w~~av~~il~~l~~eq~~~~~~~~Y~F~r~t~~~~dtl~~~G~G~p 251 (489)
T 2p0v_A 183 CYPIRLAYHYWKTTGDASV---F--------SDEWLQAIANVLKTFKEQQRKDDAKGPYRFQRKTERALDTMTNDGWGNP 251 (489)
T ss_dssp HHHHHHHHHHHHHHCCCTT---S--------SHHHHHHHHHHHHHHHHTTCSSCSSCSCCCCCCBSCGGGSCHHHHTCSC
T ss_pred HHHHHHHHHHHHHhCCchh---h--------HHHHHHHHHHHHHHHHHHhcccCCCCCceEeecCCCcccccccCCCCCc
Confidence 8889999999999987311 1 26888999999999988765532 01
Q ss_pred ----eEEEe-ecCCC-CCCCC-CcccHHHHHHHHHHHHH---HcC-Ch----HHHHHHHHHHHHHHHhccccc
Q 005023 475 ----RLQHS-FRNGP-SKAPG-FLDDYAFLISGLLDLYE---FGS-GT----KWLVWAIELQNTQDELFLDRE 532 (718)
Q Consensus 475 ----~l~~~-~~~g~-~~~~~-~l~DyA~li~all~LYe---aTg-d~----~~L~~A~~L~~~~~~~F~D~~ 532 (718)
+|.+| +|-.. +..-+ +....+++..+|-.+.+ ..+ +. +|.+.|.++-+.+.++.++.+
T Consensus 252 v~~tGLi~S~fRPSDDa~~yg~~ipSN~~a~v~L~~aaeia~~v~~d~~la~~~~~lA~eI~~gI~~~gv~~~ 324 (489)
T 2p0v_A 252 VKPVGLIASAFRPSDDATTFQFLVPSNFFAVTSLRKAAEILNTVNRKPALAKECTALADEVEKALKKYAVCNH 324 (489)
T ss_dssp CCCSSCCCCSBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHSEEEE
T ss_pred cCCCCceeCCCCCCCcchhcCcchHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCEecC
Confidence 12221 11100 00011 12234666666655553 333 43 477888888888888888754
No 402
>1n4q_B Geranyltransferase type-I beta subunit; protein geranylgeranyltransferase type-I, ggtase; HET: MGM GER; 2.40A {Rattus norvegicus} SCOP: a.102.4.3 PDB: 1n4p_B* 1n4r_B* 1n4s_B* 1s64_B* 1tnb_B* 1tno_B* 1tnu_B* 1tny_B* 1tnz_B*
Probab=25.43 E-value=1.7e+02 Score=31.20 Aligned_cols=123 Identities=10% Similarity=0.036 Sum_probs=0.0
Q ss_pred HHHHHHHHHhccc-c-------cCCCCCCCCCC------------------CC-hhHHHHHHHhhhhhcccCCCCCCHHH
Q 005023 157 LRLCAEQLSKSYD-S-------RFGGFGSAPKF------------------PR-PVEIQMMLYHSKKLEDTGKSGEASEG 209 (718)
Q Consensus 157 ~~~~~~~l~~~~D-~-------~~GGfg~apKF------------------P~-~~~l~~Ll~~~~~~~~~~~~~~~~~~ 209 (718)
.+++++.+....- | .+|||++.|+. |+ ...+..|.-......+ -+.-.
T Consensus 69 ~~~~i~wils~Q~~p~~~~~~~~~GGF~g~~~~~~p~~d~~~~~~~~~~d~~~v~~T~~Al~~L~~lg~~-----~~~id 143 (377)
T 1n4q_B 69 KDDIIEWIYSLQVLPTEDRSNLDRCGFRGSSYLGIPFNPSKNPGTAHPYDSGHIAMTYTGLSCLIILGDD-----LSRVD 143 (377)
T ss_dssp HHHHHHHHHTTEECCCTTCTTGGGCEECSSSTTCCCCCSSCSCCCCCTTCCCCHHHHHHHHHHHHHTTCC-----STTSC
T ss_pred HHHHHHHHHHhcCCccccccCCCCCccCCCcccCCChhhhccccccccCCCCCHHHHHHHHHHHHHhCcc-----cchhh
Q ss_pred HHHHHHHHHHHHhCCCcccCCCcEEEEecCCCCCCCCCcchHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHhcc
Q 005023 210 QKMVLFTLQCMAKGGIHDHVGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMI 289 (718)
Q Consensus 210 ~~~~~~TL~~m~~gGi~D~v~GGF~RYsvD~~W~vPHFEKmLyDnA~ll~~ya~Ay~~t~~~~y~~~A~~~~~~l~~~m~ 289 (718)
++-+..-|..+.. -+|||+- +..|-..+ -.-.+.-+.+-.+.+. .-...++++++||++ .+
T Consensus 144 ~~~~~~fL~~~Q~------~DGSf~g---~~~wGe~D--------irftY~Al~~l~llg~-~~~~~v~ka~~fL~s-cQ 204 (377)
T 1n4q_B 144 KEACLAGLRALQL------EDGSFCA---VPEGSEND--------MRFVYCASCICYMLNN-WSGMDMKKAISYIRR-SM 204 (377)
T ss_dssp HHHHHHHHHHHBC------TTSCBCS---STTCCCCB--------HHHHHHHHHHHHHTTC-GGGSCHHHHHHHHHH-TB
T ss_pred HHHHHHHHHHhcC------CCCCeee---ccCCCcch--------hHHHHHHHHHHHHhcC-CChHHHHHHHHHHHH-hc
Q ss_pred CCCCceeeeccCCc
Q 005023 290 GPGGEIFSAEDADS 303 (718)
Q Consensus 290 ~p~Ggf~sa~DADs 303 (718)
.++|||-.+-...|
T Consensus 205 n~DGGfGe~p~~ES 218 (377)
T 1n4q_B 205 SYDNGLAQGAGLES 218 (377)
T ss_dssp CTTSSBBSSTTSCB
T ss_pred CCCCCCCCCCCCCC
No 403
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=25.00 E-value=25 Score=33.35 Aligned_cols=36 Identities=14% Similarity=0.087 Sum_probs=21.8
Q ss_pred EcCCchhhhhhccccCcHHHHHHhhcccEEEEecCC
Q 005023 19 INTCHWCHVMEVESFEDEGVAKLLNDWFVSIKVDRE 54 (718)
Q Consensus 19 y~~C~wChvM~~esf~d~~va~~ln~~Fv~vkvD~e 54 (718)
..||+.|+.|+...=..+++++.+......++++..
T Consensus 23 d~~Cp~C~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 58 (189)
T 3l9v_A 23 SFYCPPCYAFSQTMGVDQAIRHVLPQGSRMVKYHVS 58 (189)
T ss_dssp CTTCHHHHHHHHTSCHHHHHHTTCCTTCCEEEEECS
T ss_pred CCCChhHHHHhHhccchHHHHHhCCCCCEEEEEech
Confidence 489999999985430236676665544333444443
No 404
>1ku3_A Sigma factor SIGA; helix-turn-helix, transcription; 1.80A {Thermus aquaticus} SCOP: a.4.13.2 PDB: 1ku7_A 1rio_H 3n97_A*
Probab=24.94 E-value=67 Score=25.23 Aligned_cols=28 Identities=21% Similarity=0.222 Sum_probs=26.1
Q ss_pred CchHHHHhcCCCHHHHHHHHHHHHHHHH
Q 005023 371 DSSASASKLGMPLEKYLNILGECRRKLF 398 (718)
Q Consensus 371 ~~~~~a~~~g~~~~~~~~~l~~~r~~L~ 398 (718)
+..++|+.+|++...+...+..++++|.
T Consensus 32 s~~eIA~~l~is~~tV~~~~~ra~~kLr 59 (73)
T 1ku3_A 32 TLEEVGAYFGVTRERIRQIENKALRKLK 59 (73)
T ss_dssp CHHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 5679999999999999999999999998
No 405
>3c68_A Uncharacterized protein YGJK; GH63, processing alpha-glucosidase, alpha/alpha barrel, hydrolase; HET: BMA; 1.50A {Escherichia coli} PDB: 3c67_A* 2ds3_A* 3c69_A* 3d3i_A
Probab=24.84 E-value=75 Score=37.33 Aligned_cols=44 Identities=11% Similarity=0.103 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHcCCh----HHHHHHHHHHHHHHHhcccccCCccccCC
Q 005023 497 LISGLLDLYEFGSGT----KWLVWAIELQNTQDELFLDREGGGYFNTT 540 (718)
Q Consensus 497 li~all~LYeaTgd~----~~L~~A~~L~~~~~~~F~D~~~Gg~f~t~ 540 (718)
....+.++.+..|++ .|.+.|.++.+.+.++|||++.|.||+..
T Consensus 561 al~~lA~lA~~LG~~e~A~~y~~~A~~lk~ai~~~fWd~e~G~y~D~~ 608 (761)
T 3c68_A 561 DNHYLAEMATILGKPEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVR 608 (761)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTEETTTTEECCEE
T ss_pred HHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcCccCCEEEEEe
Confidence 345556677777875 58899999999999999999888887643
No 406
>3p2c_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE PGE; 1.60A {Bacteroides ovatus} SCOP: a.102.1.8 PDB: 3on6_A*
Probab=24.66 E-value=4.8e+02 Score=28.60 Aligned_cols=112 Identities=16% Similarity=0.174 Sum_probs=63.8
Q ss_pred cccHHHHHHHHHHHHHHcCCh-----HHHHHHHHHHHHHHHhcccccCCccccCCC---CC--------------Ccccc
Q 005023 491 LDDYAFLISGLLDLYEFGSGT-----KWLVWAIELQNTQDELFLDREGGGYFNTTG---ED--------------PSVLL 548 (718)
Q Consensus 491 l~DyA~li~all~LYeaTgd~-----~~L~~A~~L~~~~~~~F~D~~~Gg~f~t~~---~~--------------~~l~~ 548 (718)
+|--|+.+.-.-.+|+.|||. .|++....+.+.+.+.-.....+.|.+.-. .. -.++.
T Consensus 162 lDSL~~~l~La~~y~~~Tgd~~~f~~~w~~a~~~il~~~~~~q~~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~ 241 (463)
T 3p2c_A 162 IDSLCYPLRLAYHYWKTTGDASIFNEEWIQAITNVLKTFKEQQRKDGVGPYKFQRKTERALDTVSNDGLGAPVKPVGLIV 241 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCTTCSHHHHHHHHHHHHHHHHTTCSSSSCSCCCBCCBSCGGGSCHHHHTCSCCCCSSCCB
T ss_pred hhhhhHHHHHHHHHHHhhCChhhhcHHHHHHHHHHHHHHHHHhccCCCCCceEeecCCCCCcccCCCCcCCCcCCCCcee
Confidence 456689999999999999865 577777777777665432211233444211 00 11222
Q ss_pred ccccCCCCCCC-----ChHHHHHHHHHHHHHHhCC-CCchHHHHHHHHHHHHHHHHHHhh
Q 005023 549 RVKEDHDGAEP-----SGNSVSVINLVRLASIVAG-SKSDYYRQNAEHSLAVFETRLKDM 602 (718)
Q Consensus 549 r~k~~~D~a~P-----S~ns~~a~~LlrL~~lt~~-~~~~~y~e~a~~~l~~~~~~i~~~ 602 (718)
.-.-..|.++- .+|..++..|-+++.+... ..+....++++++-..+..-|.++
T Consensus 242 S~FRPSDDa~~~~~~iPsN~~a~v~L~~aaei~~~l~~d~~la~~~~~lA~eIr~gI~k~ 301 (463)
T 3p2c_A 242 SSFRPSDDATTLQFLVPSNFFAVSSLRKAAEILEKVNKKTALSKECKDLAQEVETALKKY 301 (463)
T ss_dssp CSBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHh
Confidence 12223455552 2688888888888877631 113455566655555555555544
No 407
>1g9g_A Cellulase CEL48F; processive-endo, hydrolase; 1.90A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1f9o_A* 1fbo_A* 1fce_A* 1fae_A 1fbw_A* 1f9d_A* 2qno_A* 1g9j_A*
Probab=24.51 E-value=6.3e+02 Score=28.24 Aligned_cols=112 Identities=10% Similarity=0.057 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHhccC-CCCcee------eeccCCcccccCcccccCCceEeechHHHH
Q 005023 254 QGQLANVYLDAFSLTKDVFYSYICRDILDYLRRDMIG-PGGEIF------SAEDADSAETEGATRKKEGAFYVWTSKEVE 326 (718)
Q Consensus 254 nA~ll~~ya~Ay~~t~~~~y~~~A~~~~~~l~~~m~~-p~Ggf~------sa~DADs~~~~~~~~~~EG~yY~Wt~~Ei~ 326 (718)
||--+.-.++.|.+|||+..+.+..+=+.|++.+..- ++|-|. ++-..|.
T Consensus 415 QaWsmeRvAeyYY~tGd~~Ak~ildKWv~W~~~~~~~~~~G~f~iPs~L~WsGqPdt----------------------- 471 (629)
T 1g9g_A 415 QVWSMQRVAELYYKTGDARAKKLLDKWAKWINGEIKFNADGTFQIPSTIDWEGQPDT----------------------- 471 (629)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTSCEECTTSCEEEEEEEEEESCCCC-----------------------
T ss_pred chhhHHHHHHHHHhcccHHHHHHHHHHHHHHHhceEECCCCCEecCCcccccCCCCc-----------------------
Q ss_pred HHhchhHHHHHHHhcccCCCCcCCCCCCCCCCccCCcceeecc----CCchHHHHhcCCCHHHHHHHHHHHHHHHHhhhc
Q 005023 327 DILGEHAILFKEHYYLKPTGNCDLSRMSDPHNEFKGKNVLIEL----NDSSASASKLGMPLEKYLNILGECRRKLFDVRS 402 (718)
Q Consensus 327 ~~L~~~~~~~~~~~~v~~~Gn~~~~~~~dp~~~~eg~nvL~~~----~~~~~~a~~~g~~~~~~~~~l~~~r~~L~~~R~ 402 (718)
.++.+...|+..||+. ...--++
T Consensus 472 ---------------------------W~~~~s~~gN~~lhv~V~~~g~DvGva-------------------------- 498 (629)
T 1g9g_A 472 ---------------------------WNPTQGYTGNANLHVKVVNYGTDLGCA-------------------------- 498 (629)
T ss_dssp ---------------------------CCTTTCCCCCTTCEEEEEEEECCHHHH--------------------------
T ss_pred ---------------------------cccCCCCCCCCCeEEEEeecCcchhHH--------------------------
Q ss_pred cCCCCCCCchhhhchHHHHHHHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCC
Q 005023 403 KRPRPHLDDKVIVSWNGLVISSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQT 473 (718)
Q Consensus 403 ~R~~P~~Ddkilt~WNgl~I~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~ 473 (718)
+-++.+|+-.+...+| .+..+.|+++++.++.+..|..+
T Consensus 499 ----------------~s~A~tL~yYAa~sgd----------------~~ak~~Ak~LLD~~W~~~~D~~G 537 (629)
T 1g9g_A 499 ----------------SSLANTLTYYAAKSGD----------------ETSRQNAQKLLDAMWNNYSDSKG 537 (629)
T ss_dssp ----------------HHHHHHHHHHHHHHCC----------------HHHHHHHHHHHHHHHHHSEETTE
T ss_pred ----------------HHHHHHHHHHHhhccc----------------HHHHHHHHHHHHHHHHhCCCCCc
No 408
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=24.29 E-value=43 Score=29.98 Aligned_cols=59 Identities=10% Similarity=0.050 Sum_probs=29.9
Q ss_pred EEEcCCchhhhhhccccCcHHHHHHhhcccEEE-EecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCcee
Q 005023 17 FLINTCHWCHVMEVESFEDEGVAKLLNDWFVSI-KVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPL 89 (718)
Q Consensus 17 i~y~~C~wChvM~~esf~d~~va~~ln~~Fv~v-kvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p~ 89 (718)
++.++|++|+... ++|+++=|.+ .+|..+.|.-...+... .+..|.|..-+++..|..+
T Consensus 6 Y~~~~C~~C~ka~----------~~L~~~gi~y~~~di~~~~~~~~el~~~----l~~~~~~~~~l~n~~~~~~ 65 (132)
T 1z3e_A 6 YTSPSCTSCRKAR----------AWLEEHEIPFVERNIFSEPLSIDEIKQI----LRMTEDGTDEIISTRSKVF 65 (132)
T ss_dssp EECTTCHHHHHHH----------HHHHHTTCCEEEEETTTSCCCHHHHHHH----HHTCSSCGGGTBCTTSHHH
T ss_pred EeCCCChHHHHHH----------HHHHHcCCceEEEEccCCCccHHHHHHH----HHHcCCCHHHhhcCCchHH
Confidence 4569999999743 3444432222 34555554433333332 2223445555666665444
No 409
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=24.18 E-value=4.5e+02 Score=29.74 Aligned_cols=65 Identities=17% Similarity=0.173 Sum_probs=43.0
Q ss_pred CCCcEEEEecCCCCCCCCCcchHHHHHHHHHHHHH---HHHcc-CChHHHHHHHHHHHHHHHhccCCCCceeee
Q 005023 229 VGGGFHRYSVDERWHVPHFEKMLYDQGQLANVYLD---AFSLT-KDVFYSYICRDILDYLRRDMIGPGGEIFSA 298 (718)
Q Consensus 229 v~GGF~RYsvD~~W~vPHFEKmLyDnA~ll~~ya~---Ay~~t-~~~~y~~~A~~~~~~l~~~m~~p~Ggf~sa 298 (718)
+-||+| |..=++-+---|-|.=..|+|.|.+ +|... +-+..++.++-.++||++ |...++.||.-
T Consensus 49 l~GGwy----DAGD~~Ky~~p~a~t~~~L~w~~~e~~~~~~~~g~~~d~ldeikwg~Dyllk-~~~~~~~~y~q 117 (605)
T 1tf4_A 49 LTGGWY----DAGDHVKFGFPMAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIK-AHPSPNVLYVQ 117 (605)
T ss_dssp CCCSBC----CSSSCCEEHHHHHHHHHHHHHHHHHCHHHHHHTTCHHHHHHHHHHHHHHHHH-TCSBTTBEEEE
T ss_pred CCCcee----ECCCCCEeccchHHHHHHHHHHHHHhHHHHhhcCCcccHHHHHHHHHHHHHH-hccCCCeEEEE
Confidence 567777 4433333334577777777777655 44433 348889999999999998 65555667763
No 410
>2jpc_A SSRB; DNA binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium}
Probab=24.08 E-value=77 Score=23.60 Aligned_cols=29 Identities=17% Similarity=0.082 Sum_probs=25.8
Q ss_pred CchHHHHhcCCCHHHHHHHHHHHHHHHHh
Q 005023 371 DSSASASKLGMPLEKYLNILGECRRKLFD 399 (718)
Q Consensus 371 ~~~~~a~~~g~~~~~~~~~l~~~r~~L~~ 399 (718)
+..++|+.+|+++..+...+..+++||..
T Consensus 15 s~~eIA~~l~is~~tV~~~~~~~~~kl~~ 43 (61)
T 2jpc_A 15 TNHGISEKLHISIKTVETHRMNMMRKLQV 43 (61)
T ss_dssp CSHHHHHHTCSCHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHhCCCHHHHHHHHHHHHHHHCC
Confidence 46789999999999999999999999854
No 411
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=23.83 E-value=37 Score=30.13 Aligned_cols=59 Identities=15% Similarity=0.339 Sum_probs=33.3
Q ss_pred EEEcCCchhhhhhccccCcHHHHHHhhcccEEE-EecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCcee
Q 005023 17 FLINTCHWCHVMEVESFEDEGVAKLLNDWFVSI-KVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPL 89 (718)
Q Consensus 17 i~y~~C~wChvM~~esf~d~~va~~ln~~Fv~v-kvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p~ 89 (718)
+++++|..|+.-. ++|+++=|.+ .+|..+.|.-.......++ ..|.|..-+++..|..+
T Consensus 8 Y~~~~C~~c~ka~----------~~L~~~gi~~~~~di~~~~~~~~eL~~~l~----~~g~~~~~l~n~~~~~~ 67 (120)
T 3fz4_A 8 YEYPKCSTCRRAK----------AELDDLAWDYDAIDIKKNPPAASLIRNWLE----NSGLELKKFFNTSGQSY 67 (120)
T ss_dssp EECSSCHHHHHHH----------HHHHHHTCCEEEEETTTSCCCHHHHHHHHH----HSCCCGGGGBCTTSHHH
T ss_pred EeCCCChHHHHHH----------HHHHHcCCceEEEEeccCchhHHHHHHHHH----HcCCCHHHHhCCCCcch
Confidence 3469999999844 4565543333 3565555433333333322 24677666777776544
No 412
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=23.14 E-value=1.4e+02 Score=29.42 Aligned_cols=36 Identities=14% Similarity=-0.056 Sum_probs=24.2
Q ss_pred CCcEEEeCCCCceeecccccCCCCCCCcccHHHHHHHHHH
Q 005023 76 WPLSVFLSPDLKPLMGGTYFPPEDKYGRPGFKTILRKVKD 115 (718)
Q Consensus 76 wP~~vfl~p~g~p~~~~~y~p~~~~~~~~~f~~~L~~i~~ 115 (718)
.+.++++||+|+..+...|-.+.. ..+-++|+.|..
T Consensus 143 ~R~tFiID~~G~Ir~~~v~~~~~g----rn~dEiLr~l~A 178 (216)
T 3sbc_A 143 LRGLFIIDPKGVIRHITINDLPVG----RNVDEALRLVEA 178 (216)
T ss_dssp CEEEEEECTTSBEEEEEEECTTBC----CCHHHHHHHHHH
T ss_pred eeEEEEECCCCeEEEEEEcCCCCC----CCHHHHHHHHHH
Confidence 477999999999887554432221 268888876643
No 413
>3qt9_A Putative uncharacterized protein CPE0426; alpha-alpha six fold, glycoside hydrolase, mannosidase, HYDR; HET: YDR; 2.05A {Clostridium perfringens} SCOP: a.102.1.8 PDB: 3qt3_A* 2nvp_A
Probab=23.07 E-value=5.4e+02 Score=27.87 Aligned_cols=112 Identities=11% Similarity=0.072 Sum_probs=63.9
Q ss_pred cccHHHHHHHHHHHHHHcCCh-----HHHHHHHHHHHHHHHhcccccCCccccCCCC---C--------------Ccccc
Q 005023 491 LDDYAFLISGLLDLYEFGSGT-----KWLVWAIELQNTQDELFLDREGGGYFNTTGE---D--------------PSVLL 548 (718)
Q Consensus 491 l~DyA~li~all~LYeaTgd~-----~~L~~A~~L~~~~~~~F~D~~~Gg~f~t~~~---~--------------~~l~~ 548 (718)
+|--|+.+.-.-.+|+.|||. .|++....+.+.+.+.-.....+.|.+.-.. . -.++.
T Consensus 134 lDSL~~~l~La~~y~~~Tgd~~~f~~~w~~a~~~il~~~~~~q~~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~ 213 (427)
T 3qt9_A 134 IDSLCYPVRLIHKYWKESGDETFFNYDIKKAFNMIIDLWRVEQYHREKSDYSFQRLNCSVTDTLSHEGLGTPVTYTGMTW 213 (427)
T ss_dssp THHHHHHHHHHHHHHHHHCCCTTCCHHHHHHHHHHHHHHHHGGGHHHHCCCCCBCSSSCGGGSCHHHHTCSCCCCCSSCC
T ss_pred HhhhHHHHHHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHhccCCCCCceEeccCCCCCccccCCCCCCCcCCCCcee
Confidence 456689999999999999865 5677777777666554321122334432110 0 11221
Q ss_pred ccccCCCCCCC-----ChHHHHHHHHHHHHHHhCCC-CchHHHHHHHHHHHHHHHHHHhh
Q 005023 549 RVKEDHDGAEP-----SGNSVSVINLVRLASIVAGS-KSDYYRQNAEHSLAVFETRLKDM 602 (718)
Q Consensus 549 r~k~~~D~a~P-----S~ns~~a~~LlrL~~lt~~~-~~~~y~e~a~~~l~~~~~~i~~~ 602 (718)
.-.-+.|.++- .+|..++..|-+++.+...- .+....++++++-..+..-|.++
T Consensus 214 S~FRPSDDa~~~~~~iPsN~~a~vaL~~~aei~~~l~~d~~La~~~~~la~eIr~aI~k~ 273 (427)
T 3qt9_A 214 SGFRPSDDACEYGYLIPANMFAVVALRYISEIAEKVYKDEELKEKADSLREEIDNAIEKH 273 (427)
T ss_dssp CSBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHh
Confidence 12223455552 26888888888888776321 13456666666655555555554
No 414
>2dbs_A Hypothetical protein TTHC002; extremely thermophili bacteria, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} SCOP: d.374.1.1
Probab=22.22 E-value=71 Score=26.18 Aligned_cols=53 Identities=17% Similarity=0.285 Sum_probs=36.9
Q ss_pred HHHHHhhcccEEEEecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCceee
Q 005023 37 GVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLM 90 (718)
Q Consensus 37 ~va~~ln~~Fv~vkvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p~~ 90 (718)
.....|-.-|+-|-+|.+| |++.+.-...+.-.-...|||+.+-+--.|+|+.
T Consensus 23 gL~~eLP~~y~LV~L~~de-PEvaa~AL~~A~eapn~EGwP~VYALFlqGr~lR 75 (90)
T 2dbs_A 23 DLLRELPPTYRLVLLPLDE-PEVAAQALAWAMEAPNPEGWPSVYALFLQGRPIR 75 (90)
T ss_dssp TCGGGSCSSCEEEEEETTC-HHHHHHHHHHHHSCCCSSSSCEEEEEEETTEEEE
T ss_pred hHHHhCCCceEEEecCCCC-HHHHHHHHHHHHhCCCCCCChhHHHHHhCCceeE
Confidence 3445566789999999988 6776554433332234689999987777888875
No 415
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=22.14 E-value=65 Score=31.41 Aligned_cols=21 Identities=14% Similarity=0.110 Sum_probs=18.7
Q ss_pred cCCCCCCcEEEeCCCCceeec
Q 005023 71 YGGGGWPLSVFLSPDLKPLMG 91 (718)
Q Consensus 71 ~g~~GwP~~vfl~p~g~p~~~ 91 (718)
+|+.++|+.|++.++|++...
T Consensus 201 f~v~~~Pslvl~~~~g~~~~~ 221 (244)
T 3q6o_A 201 FGVTDFPSCYLLFRNGSVSRV 221 (244)
T ss_dssp HTCCCSSEEEEEETTSCEEEC
T ss_pred cCCCCCCeEEEEeCCCCeEee
Confidence 688999999999999998853
No 416
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=21.33 E-value=52 Score=30.16 Aligned_cols=14 Identities=29% Similarity=0.446 Sum_probs=11.7
Q ss_pred EcCCchhhhhhccc
Q 005023 19 INTCHWCHVMEVES 32 (718)
Q Consensus 19 y~~C~wChvM~~es 32 (718)
..+|+||+.|+...
T Consensus 36 D~~Cp~C~~~~~~~ 49 (175)
T 1z6m_A 36 NVRCPYCRKWFEES 49 (175)
T ss_dssp CTTCHHHHHHHHHH
T ss_pred CCCCcchHHHHHHH
Confidence 47999999998754
No 417
>3qry_B Putative uncharacterized protein; alpha-alpha six fold, glycoside hydrolase, mannosidase, 1- deoxymannojirimycin, hydrolase; HET: DMJ; 1.75A {Streptococcus pneumoniae} SCOP: a.102.1.0 PDB: 3qpf_A* 3qsp_A*
Probab=21.20 E-value=5.6e+02 Score=27.79 Aligned_cols=111 Identities=14% Similarity=0.102 Sum_probs=64.1
Q ss_pred cccHHHHHHHHHHHHHHcCCh-----HHHHHHHHHHHHHHHhcccccCCccccCCC---CC--------------Ccccc
Q 005023 491 LDDYAFLISGLLDLYEFGSGT-----KWLVWAIELQNTQDELFLDREGGGYFNTTG---ED--------------PSVLL 548 (718)
Q Consensus 491 l~DyA~li~all~LYeaTgd~-----~~L~~A~~L~~~~~~~F~D~~~Gg~f~t~~---~~--------------~~l~~ 548 (718)
+|--|+.+.-.-.+|+.|||. .|++....+.+.+.+.- +++.+.|.+.-. .. -.++.
T Consensus 133 lDSL~~~l~La~~y~~~Tgd~~~f~~~w~~a~~~il~~~~~eq-~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~ 211 (426)
T 3qry_B 133 VDSLCYPLQLAYLLWKETGETSQFDEIFVAATKEILHLWTVEQ-DHKNSPYRFVRDTDRKEDTLVNDGFGPDFAVTGMTW 211 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCTTCSHHHHHHHHHHHHHHHHTT-SGGGCCCCCEECCSCGGGSCHHHHTCSCCCCCSSCC
T ss_pred HhhhHHHHHHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHh-ccCCCCceeeecCCCCCccccCCCCCCCcCCCCcee
Confidence 456689999999999999865 57777777777766533 223344443211 00 11221
Q ss_pred ccccCCCCCCC-----ChHHHHHHHHHHHHHHhC---CCCchHHHHHHHHHHHHHHHHHHhh
Q 005023 549 RVKEDHDGAEP-----SGNSVSVINLVRLASIVA---GSKSDYYRQNAEHSLAVFETRLKDM 602 (718)
Q Consensus 549 r~k~~~D~a~P-----S~ns~~a~~LlrL~~lt~---~~~~~~y~e~a~~~l~~~~~~i~~~ 602 (718)
.-.-+.|.++- .+|..++..|-+++.+.. -..+....++++++-..+..-|.++
T Consensus 212 S~FRPSDDa~~~~~~iPsN~~~~v~L~~~aei~~~~~v~~d~~la~~~~~la~eIr~~I~k~ 273 (426)
T 3qry_B 212 SAFRPSDDCCQYSYLIPSNMFAVVVLGYVQEIFAALNLADSQSVIADAKRLQDEIQEGIKNY 273 (426)
T ss_dssp CSBCTTSSBCSSSEEHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHHHHHHh
Confidence 11223455552 268888888988888764 1123445566655555555555544
No 418
>3c68_A Uncharacterized protein YGJK; GH63, processing alpha-glucosidase, alpha/alpha barrel, hydrolase; HET: BMA; 1.50A {Escherichia coli} PDB: 3c67_A* 2ds3_A* 3c69_A* 3d3i_A
Probab=20.76 E-value=1.2e+02 Score=35.42 Aligned_cols=51 Identities=22% Similarity=0.318 Sum_probs=36.7
Q ss_pred hHHHHH---HHHHHHHHHhhhhhhhhcccCCCCCCChHHHHHHHHHHHHHHHHhccccCCCeEEEe
Q 005023 417 WNGLVI---SSFARASKILKSEAESAMFNFPVVGSDRKEYMEVAESAASFIRRHLYDEQTHRLQHS 479 (718)
Q Consensus 417 WNgl~I---~ALa~A~~~~~d~~~~~~~~~~~~~~~~~~~l~~A~~~~~~l~~~~~d~~~g~l~~~ 479 (718)
-|+++. ..+++.++++|+... ..+|.+.|.++.+.+.+++|+++.|.++..
T Consensus 554 lnA~ly~al~~lA~lA~~LG~~e~------------A~~y~~~A~~lk~ai~~~fWd~e~G~y~D~ 607 (761)
T 3c68_A 554 QASYMYSDNHYLAEMATILGKPEE------------AKRYRQLAQQLADYINTCMFDPTTQFYYDV 607 (761)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHH------------HHHHHHHHHHHHHHHHHHTEETTTTEECCE
T ss_pred HHHHHHHHHHHHHHHHHHhCChHH------------HHHHHHHHHHHHHHHHHhCcCccCCEEEEE
Confidence 456654 466667777776311 157999999999999999999877766543
No 419
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=20.72 E-value=6.5e+02 Score=26.30 Aligned_cols=74 Identities=14% Similarity=-0.053 Sum_probs=52.0
Q ss_pred cHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcccccCCccccCCCCCCccccccccCCCCCCCChHHHHHHHHHHH
Q 005023 493 DYAFLISGLLDLYEFGSGTKWLVWAIELQNTQDELFLDREGGGYFNTTGEDPSVLLRVKEDHDGAEPSGNSVSVINLVRL 572 (718)
Q Consensus 493 DyA~li~all~LYeaTgd~~~L~~A~~L~~~~~~~F~D~~~Gg~f~t~~~~~~l~~r~k~~~D~a~PS~ns~~a~~LlrL 572 (718)
|-+..+.+|..+|..+.++.|.+.+.+-.+.++.--+. +|||---..+. .-.....+..| -++++.|..|
T Consensus 75 dTa~vl~~Larv~~~~~~~~y~~Ai~Rgl~wlL~mQ~~--nGGWpqFdpd~-~~Yl~~IpFnD-------DvtarvLelL 144 (332)
T 1gxm_A 75 ATITEMVFLAEVYKSGGNTKYRDAVRKAANFLVNSQYS--TGALPQFYPLK-GGYSDHATFND-------NGMAYALTVL 144 (332)
T ss_dssp TTHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCT--TSCCBSEESCC-SGGGGSEECGG-------GHHHHHHHHH
T ss_pred cHHHHHHHHHHHhccccchHHHHHHHHHHHHHHhccCC--CCCccccCCCc-ccccccCCcch-------HHHHHHHHHH
Confidence 45889999999999999999999999999998877653 56654322222 12223334444 4788888888
Q ss_pred HHHh
Q 005023 573 ASIV 576 (718)
Q Consensus 573 ~~lt 576 (718)
..+-
T Consensus 145 ~~~~ 148 (332)
T 1gxm_A 145 DFAA 148 (332)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8774
No 420
>3mzy_A RNA polymerase sigma-H factor; PSI, MCSG, structural genomics, midwest center for structura genomics, protein structure initiative; 2.50A {Fusobacterium nucleatum subsp}
Probab=20.69 E-value=80 Score=28.04 Aligned_cols=30 Identities=20% Similarity=0.114 Sum_probs=26.9
Q ss_pred CchHHHHhcCCCHHHHHHHHHHHHHHHHhh
Q 005023 371 DSSASASKLGMPLEKYLNILGECRRKLFDV 400 (718)
Q Consensus 371 ~~~~~a~~~g~~~~~~~~~l~~~r~~L~~~ 400 (718)
+..++|+.+|++...+...+..++++|...
T Consensus 126 s~~EIA~~lgis~~tV~~~~~ra~~~Lr~~ 155 (164)
T 3mzy_A 126 SYREIATILSKNLKSIDNTIQRIRKKSEEW 155 (164)
T ss_dssp CHHHHHHHHTCCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 567999999999999999999999998863
No 421
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=20.40 E-value=44 Score=29.49 Aligned_cols=61 Identities=16% Similarity=0.129 Sum_probs=33.4
Q ss_pred EEEEcCCchhhhhhccccCcHHHHHHhhcccEEE-EecCCCCcchHHHHHHHHHHhcCCCCCCcEEEeCCCCceee
Q 005023 16 HFLINTCHWCHVMEVESFEDEGVAKLLNDWFVSI-KVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLM 90 (718)
Q Consensus 16 ii~y~~C~wChvM~~esf~d~~va~~ln~~Fv~v-kvD~ee~pd~d~~y~~~~q~~~g~~GwP~~vfl~p~g~p~~ 90 (718)
|+++++|.+|+.-. ++|+++=|.+ .+|..+.|.-........+ ..|.|..-+++..|..+.
T Consensus 4 iY~~~~C~~c~ka~----------~~L~~~gi~~~~~di~~~~~~~~el~~~l~----~~~~~~~~l~n~~~~~~k 65 (120)
T 3l78_A 4 LFLSPSCTSCRKAR----------AWLNRHDVVFQEHNIMTSPLSRDELLKILS----YTENGTEDIISTRSKVFQ 65 (120)
T ss_dssp EEECSSCHHHHHHH----------HHHHHTTCCEEEEETTTSCCCHHHHHHHHH----HCSSTHHHHBCTTCHHHH
T ss_pred EEeCCCCHHHHHHH----------HHHHHcCCCeEEEecccCCCcHHHHHHHHh----hcCCCHHHhhcCCcHHHH
Confidence 35569999999843 4555433332 4565554433333333322 235566667777766553
Done!