AmiGO: BLAST Results


BLAST match view associations BLAST with PAL1 PAL1 PAL1 PHE ammonia lyase 1	protein from Arabidopsis thaliana	0.
BLAST match view associations BLAST with PAL2 PAL2 PAL2 phenylalanine ammonia-lyase 2	protein from Arabidopsis thaliana	7.0e-315
BLAST match view associations BLAST with PAL4 PAL4 PAL4 phenylalanine ammonia-lyase 4	protein from Arabidopsis thaliana	9.4e-304
BLAST match view associations BLAST with SO_4374 SO_4374 SO_4374 histidine ammonia-lyase, putative	protein from Shewanella oneidensis MR-1	2.1e-54
BLAST match view associations BLAST with hutH hutH hutH Histidine ammonia-lyase	protein from Vibrio cholerae O1 biovar El Tor str. N16961	2.1e-54
BLAST match view associations BLAST with VC_1202 VC_1202 VC_1202 histidine ammonia-lyase	protein from Vibrio cholerae O1 biovar El Tor	2.1e-54
BLAST match view associations BLAST with tam tam tam Tyrosine 2,3-aminomutase	protein from Myxococcus fulvus	2.4e-53
BLAST match view associations BLAST with tam tam tam Tyrosine 2,3-aminomutase	protein from Myxococcus sp. Mx-B0	3.0e-53
BLAST match view associations BLAST with DDB_G0273787 DDB_G0273787 DDB_G0273787 putative histidine ammonia-lyase	gene from Dictyostelium discoideum	5.6e-52
BLAST match view associations BLAST with DDB_G0273081 DDB_G0273081 DDB_G0273081 putative histidine ammonia-lyase	gene from Dictyostelium discoideum	5.6e-52
BLAST match view associations BLAST with CPS_0908 CPS_0908 CPS_0908 histidine ammonia-lyase	protein from Colwellia psychrerythraea 34H	2.2e-50
BLAST match view associations BLAST with Rmet_0231 Rmet_0231 Rmet_0231 Tyrosine ammonia-lyase	protein from Cupriavidus metallidurans CH34	5.2e-49
BLAST match view associations BLAST with SO_0098 SO_0098 SO_0098 histidine ammonia-lyase	protein from Shewanella oneidensis MR-1	5.2e-49
BLAST match view associations BLAST with BA_3712 BA_3712 BA_3712 histidine ammonia-lyase	protein from Bacillus anthracis str. Ames	1.8e-48
BLAST match view associations BLAST with HAL HAL HAL Histidine ammonia-lyase	protein from Sus scrofa	2.3e-48
BLAST match view associations BLAST with HAL HAL HAL Histidine ammonia-lyase	protein from Gallus gallus	2.9e-48
BLAST match view associations BLAST with HAL HAL HAL Histidine ammonia-lyase	protein from Gallus gallus	2.9e-48
BLAST match view associations BLAST with cmdF cmdF cmdF Tyrosine 2,3-aminomutase	protein from Chondromyces crocatus	5.2e-48
BLAST match view associations BLAST with HAL HAL HAL Histidine ammonia-lyase	protein from Homo sapiens	1.6e-47
BLAST match view associations BLAST with HAL HAL HAL Histidine ammonia-lyase	protein from Canis lupus familiaris	2.1e-47
BLAST match view associations BLAST with HAL HAL HAL Histidine ammonia-lyase	protein from Bos taurus	8.2e-47
BLAST match view associations BLAST with hal hal hal histidine ammonia-lyase	gene_product from Danio rerio	1.8e-46
BLAST match view associations BLAST with SPO_2192 SPO_2192 SPO_2192 histidine ammonia-lyase	protein from Ruegeria pomeroyi DSS-3	2.4e-46
BLAST match view associations BLAST with Hal Hal Hal histidine ammonia lyase	protein from Mus musculus	2.4e-46
BLAST match view associations BLAST with Hal Hal Hal histidine ammonia lyase	gene from Rattus norvegicus	4.1e-46
BLAST match view associations BLAST with haly-1 haly-1 haly-1	gene from Caenorhabditis elegans	3.3e-40
BLAST match view associations BLAST with hal hal hal histidase	gene from Dictyostelium discoideum	3.4e-31
BLAST match view associations BLAST with SO_3299 SO_3299 SO_3299 Pal/histidase family protein	protein from Shewanella oneidensis MR-1	1.6e-18
BLAST match view associations BLAST with HAL HAL HAL Histidine ammonia-lyase	protein from Homo sapiens	2.2e-18
BLAST match view associations BLAST with SO_3057 SO_3057 SO_3057 Pal/histidase family protein	protein from Shewanella oneidensis MR-1	1.9e-16
BLAST match view associations BLAST with HAL HAL HAL Histidine ammonia-lyase	protein from Homo sapiens	5.0e-09
BLAST match view associations BLAST with DDB_G0285259 DDB_G0285259 DDB_G0285259	gene from Dictyostelium discoideum	0.00012
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  005031
        (718 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2057981 - symbol:PAL1 "PHE ammonia lyase 1" sp...  3072  0.        1
TAIR|locus:2101958 - symbol:PAL2 "phenylalanine ammonia-l...  3020  7.0e-315  1
TAIR|locus:2076244 - symbol:PAL4 "phenylalanine ammonia-l...  2915  9.4e-304  1
ASPGD|ASPL0000000997 - symbol:AN6075 species:162425 "Emer...   892  2.2e-89   1
ASPGD|ASPL0000017810 - symbol:AN3897 species:162425 "Emer...   858  8.9e-86   1
TIGR_CMR|SO_4374 - symbol:SO_4374 "histidine ammonia-lyas...   562  2.1e-54   1
UNIPROTKB|Q9KSQ4 - symbol:hutH "Histidine ammonia-lyase" ...   562  2.1e-54   1
TIGR_CMR|VC_1202 - symbol:VC_1202 "histidine ammonia-lyas...   562  2.1e-54   1
UNIPROTKB|B8ZV93 - symbol:tam "Tyrosine 2,3-aminomutase" ...   552  2.4e-53   1
UNIPROTKB|B8ZV94 - symbol:tam "Tyrosine 2,3-aminomutase" ...   551  3.0e-53   1
DICTYBASE|DDB_G0273787 - symbol:DDB_G0273787 "putative hi...   539  5.6e-52   1
DICTYBASE|DDB_G0273081 - symbol:DDB_G0273081 "putative hi...   539  5.6e-52   1
TIGR_CMR|CPS_0908 - symbol:CPS_0908 "histidine ammonia-ly...   524  2.2e-50   1
UNIPROTKB|Q1LRV9 - symbol:Rmet_0231 "Tyrosine ammonia-lya...   511  5.2e-49   1
TIGR_CMR|SO_0098 - symbol:SO_0098 "histidine ammonia-lyas...   511  5.2e-49   1
TIGR_CMR|BA_3712 - symbol:BA_3712 "histidine ammonia-lyas...   506  1.8e-48   1
UNIPROTKB|F1SQR7 - symbol:HAL "Histidine ammonia-lyase" s...   505  2.3e-48   1
UNIPROTKB|F1NZQ9 - symbol:HAL "Histidine ammonia-lyase" s...   504  2.9e-48   1
UNIPROTKB|F1P294 - symbol:HAL "Histidine ammonia-lyase" s...   504  2.9e-48   1
UNIPROTKB|Q0VZ68 - symbol:cmdF "Tyrosine 2,3-aminomutase"...   502  5.2e-48   1
UNIPROTKB|P42357 - symbol:HAL "Histidine ammonia-lyase" s...   498  1.6e-47   1
UNIPROTKB|E2QW26 - symbol:HAL "Histidine ammonia-lyase" s...   497  2.1e-47   1
UNIPROTKB|A7YWP4 - symbol:HAL "Histidine ammonia-lyase" s...   492  8.2e-47   1
ZFIN|ZDB-GENE-070410-5 - symbol:hal "histidine ammonia-ly...   489  1.8e-46   1
TIGR_CMR|SPO_2192 - symbol:SPO_2192 "histidine ammonia-ly...   488  2.4e-46   1
MGI|MGI:96010 - symbol:Hal "histidine ammonia lyase" spec...   488  2.4e-46   1
RGD|68363 - symbol:Hal "histidine ammonia lyase" species:...   486  4.1e-46   1
WB|WBGene00009813 - symbol:haly-1 species:6239 "Caenorhab...   450  3.3e-40   1
DICTYBASE|DDB_G0288025 - symbol:hal "histidase" species:4...   366  3.4e-31   1
TIGR_CMR|SO_3299 - symbol:SO_3299 "Pal/histidase family p...   255  1.6e-18   1
UNIPROTKB|F8VNX0 - symbol:HAL "Histidine ammonia-lyase" s...   226  2.2e-18   2
TIGR_CMR|SO_3057 - symbol:SO_3057 "Pal/histidase family p...   236  1.9e-16   1
UNIPROTKB|F8W0V1 - symbol:HAL "Histidine ammonia-lyase" s...   145  5.0e-09   1
DICTYBASE|DDB_G0285259 - symbol:DDB_G0285259 species:4468...    91  0.00012   3


>TAIR|locus:2057981 [details] [associations]
            symbol:PAL1 "PHE ammonia lyase 1" species:3702
            "Arabidopsis thaliana" [GO:0003824 "catalytic activity"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM;IEA] [GO:0006559
            "L-phenylalanine catabolic process" evidence=IEA] [GO:0009058
            "biosynthetic process" evidence=IEA] [GO:0009699 "phenylpropanoid
            biosynthetic process" evidence=TAS] [GO:0016841 "ammonia-lyase
            activity" evidence=IEA] [GO:0045548 "phenylalanine ammonia-lyase
            activity" evidence=ISS;IDA;TAS] [GO:0006979 "response to oxidative
            stress" evidence=IEP] [GO:0080167 "response to karrikin"
            evidence=IEP] [GO:0009555 "pollen development" evidence=IMP]
            [GO:0009819 "drought recovery" evidence=IMP] [GO:0010224 "response
            to UV-B" evidence=IMP] [GO:0046244 "salicylic acid catabolic
            process" evidence=IMP] [GO:0046274 "lignin catabolic process"
            evidence=IMP] [GO:0006598 "polyamine catabolic process"
            evidence=RCA] [GO:0009611 "response to wounding" evidence=RCA;TAS]
            [GO:0009698 "phenylpropanoid metabolic process" evidence=RCA]
            [GO:0009805 "coumarin biosynthetic process" evidence=RCA]
            [GO:0009963 "positive regulation of flavonoid biosynthetic process"
            evidence=RCA] [GO:0042398 "cellular modified amino acid
            biosynthetic process" evidence=RCA] [GO:0006952 "defense response"
            evidence=TAS] InterPro:IPR001106 InterPro:IPR005922
            InterPro:IPR008948 InterPro:IPR022313 Pfam:PF00221 PROSITE:PS00488
            UniPathway:UPA00713 GO:GO:0005737 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0006979 GO:GO:0009555 GO:GO:0080167
            EMBL:AC006922 GO:GO:0006559 Gene3D:1.10.275.10 InterPro:IPR024083
            SUPFAM:SSF48557 GO:GO:0010224 eggNOG:COG2986 OMA:MPQIHGA
            GO:GO:0046274 GO:GO:0009800 EMBL:L33677 EMBL:AY303128 EMBL:AY045919
            EMBL:AY079363 EMBL:BT003330 EMBL:X62747 IPI:IPI00519512 PIR:G84787
            PIR:S52990 RefSeq:NP_181241.1 UniGene:At.21614 UniGene:At.22705
            ProteinModelPortal:P35510 SMR:P35510 IntAct:P35510 STRING:P35510
            PaxDb:P35510 PRIDE:P35510 EnsemblPlants:AT2G37040.1 GeneID:818280
            KEGG:ath:AT2G37040 TAIR:At2g37040 HOGENOM:HOG000214384
            InParanoid:P35510 KO:K10775 PhylomeDB:P35510 ProtClustDB:PLN02457
            BRENDA:4.3.1.24 Genevestigator:P35510 GermOnline:AT2G37040
            GO:GO:0045548 GO:GO:0009819 GO:GO:0046244 Gene3D:1.10.274.20
            InterPro:IPR023144 TIGRFAMs:TIGR01226 Uniprot:P35510
        Length = 725

 Score = 3072 (1086.5 bits), Expect = 0., P = 0.
 Identities = 601/728 (82%), Positives = 653/728 (89%)

Query:     1 ME-RGATTENGHQNGGLEG-LC----KNNNYNYSSGDALNWGVMAETLKGSHLEEVKRMV 54
             ME  GA   NG   GG++  LC    K  N   ++ D LNWG  AE +KGSHL+EVKRMV
Sbjct:     1 MEINGAHKSNG---GGVDAMLCGGDIKTKNMVINAEDPLNWGAAAEQMKGSHLDEVKRMV 57

Query:    55 AEYRKPVVNLGGETLTVAQVAAIAT--SSTNVELSESAREGVKASSDWVMESMNKGTDSY 112
             AE+RKPVVNLGGETLT+ QVAAI+T  +S  VELSE+AR GV ASSDWVMESMNKGTDSY
Sbjct:    58 AEFRKPVVNLGGETLTIGQVAAISTIGNSVKVELSETARAGVNASSDWVMESMNKGTDSY 117

Query:   113 GVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLL 172
             GVTTGFGATSHRRTKNG ALQKELIRFLNAGIFG+  E+SHTLPHSATRAAMLVR+NTLL
Sbjct:   118 GVTTGFGATSHRRTKNGVALQKELIRFLNAGIFGSTKETSHTLPHSATRAAMLVRINTLL 177

Query:   173 QGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPN 232
             QG+SGIRFEILEAIT  LN+NITP LPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPN
Sbjct:   178 QGFSGIRFEILEAITSFLNNNITPSLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPN 237

Query:   233 GEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSA 290
             GE + A+EA K AG   GFF+LQPKEGLALVNGTAVGSG+ASMVLFE N L++L+EILSA
Sbjct:   238 GEALTAEEAFKLAGISSGFFDLQPKEGLALVNGTAVGSGMASMVLFETNVLSVLAEILSA 297

Query:   291 IFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHEIDPLQKPKQ 350
             +FAEVM GKPEFTDHLTH+LKHHPGQIEAAAIMEHILDGSSY+  A+KLHE+DPLQKPKQ
Sbjct:   298 VFAEVMSGKPEFTDHLTHRLKHHPGQIEAAAIMEHILDGSSYMKLAQKLHEMDPLQKPKQ 357

Query:   351 DRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVS 410
             DRYALRTSPQWLGPQIEVIR+ATKSIEREINSVNDNPLIDVSRNKA+HGGNFQGTPIGVS
Sbjct:   358 DRYALRTSPQWLGPQIEVIRYATKSIEREINSVNDNPLIDVSRNKAIHGGNFQGTPIGVS 417

Query:   411 MDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSE 470
             MDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNL+  RNPSLDYGFKGAEIAMASYCSE
Sbjct:   418 MDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSE 477

Query:   471 LQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHL 530
             LQ+LANPVT+HVQSAEQHNQDVNSLGLISSRKT+EAVDILKLMS+TFLVA+CQA+DLRHL
Sbjct:   478 LQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTSEAVDILKLMSTTFLVAICQAVDLRHL 537

Query:   531 EENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYP 590
             EENL+ TVKNTVSQVAKKVLT G +GELHPSRFCEKDLLK  DRE V+ Y DDPCSATYP
Sbjct:   538 EENLRQTVKNTVSQVAKKVLTTGVNGELHPSRFCEKDLLKVVDREQVYTYADDPCSATYP 597

Query:   591 LMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTI 650
             L+QKLRQV+V+HAL NGE+EK A +SIF KI AFEEELK VLPKEVE AR   +NG+  I
Sbjct:   598 LIQKLRQVIVDHALINGESEKNAVTSIFHKIGAFEEELKAVLPKEVEAARAAYDNGTSAI 657

Query:   651 PNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREW 710
             PNRIKECRSYPLYR VREELG+  LTGEKVTSPGEEFDKVFTA+C+GKIIDPM+ECL EW
Sbjct:   658 PNRIKECRSYPLYRFVREELGTELLTGEKVTSPGEEFDKVFTAICEGKIIDPMMECLNEW 717

Query:   711 NGAPLPIC 718
             NGAP+PIC
Sbjct:   718 NGAPIPIC 725


>TAIR|locus:2101958 [details] [associations]
            symbol:PAL2 "phenylalanine ammonia-lyase 2" species:3702
            "Arabidopsis thaliana" [GO:0003824 "catalytic activity"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM;IEA] [GO:0006559
            "L-phenylalanine catabolic process" evidence=IEA] [GO:0009058
            "biosynthetic process" evidence=IEA] [GO:0016841 "ammonia-lyase
            activity" evidence=IEA] [GO:0006979 "response to oxidative stress"
            evidence=IEP] [GO:0080167 "response to karrikin" evidence=IEP]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0006598 "polyamine
            catabolic process" evidence=RCA] [GO:0009611 "response to wounding"
            evidence=RCA;TAS] [GO:0009698 "phenylpropanoid metabolic process"
            evidence=RCA] [GO:0009805 "coumarin biosynthetic process"
            evidence=RCA] [GO:0009963 "positive regulation of flavonoid
            biosynthetic process" evidence=RCA] [GO:0042398 "cellular modified
            amino acid biosynthetic process" evidence=RCA] [GO:0006952 "defense
            response" evidence=TAS] [GO:0009699 "phenylpropanoid biosynthetic
            process" evidence=TAS] [GO:0045548 "phenylalanine ammonia-lyase
            activity" evidence=ISS;TAS] InterPro:IPR001106 InterPro:IPR005922
            InterPro:IPR008948 InterPro:IPR022313 Pfam:PF00221 PROSITE:PS00488
            UniPathway:UPA00713 GO:GO:0005829 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0006979 GO:GO:0009699 GO:GO:0080167
            GO:GO:0006559 Gene3D:1.10.275.10 InterPro:IPR024083 SUPFAM:SSF48557
            EMBL:AL132958 eggNOG:COG2986 GO:GO:0009800 UniGene:At.21614
            HOGENOM:HOG000214384 KO:K10775 ProtClustDB:PLN02457 BRENDA:4.3.1.24
            GO:GO:0045548 Gene3D:1.10.274.20 InterPro:IPR023144
            TIGRFAMs:TIGR01226 EMBL:L33678 EMBL:AY303129 EMBL:AF367308
            EMBL:AY092957 EMBL:AY133595 EMBL:BT000035 IPI:IPI00525638
            PIR:T46172 RefSeq:NP_190894.1 ProteinModelPortal:P45724 SMR:P45724
            IntAct:P45724 STRING:P45724 PaxDb:P45724 PRIDE:P45724
            EnsemblPlants:AT3G53260.1 GeneID:824493 KEGG:ath:AT3G53260
            TAIR:At3g53260 InParanoid:P45724 OMA:RQFIETE PhylomeDB:P45724
            Genevestigator:P45724 GermOnline:AT3G53260 Uniprot:P45724
        Length = 717

 Score = 3020 (1068.2 bits), Expect = 7.0e-315, P = 7.0e-315
 Identities = 581/692 (83%), Positives = 634/692 (91%)

Query:    31 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIAT--SSTNVELSE 88
             D LNWG+ A+ +KGSHL+EVK+MV EYR+PVVNLGGETLT+ QVAAI+T   S  VEL+E
Sbjct:    26 DPLNWGLAADQMKGSHLDEVKKMVEEYRRPVVNLGGETLTIGQVAAISTVGGSVKVELAE 85

Query:    89 SAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNG 148
             ++R GVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNG ALQ ELIRFLNAGIFGN 
Sbjct:    86 TSRAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGTALQTELIRFLNAGIFGNT 145

Query:   149 TESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASG 208
              E+ HTLP SATRAAMLVRVNTLLQGYSGIRFEILEAIT LLNHNI+P LPLRGTITASG
Sbjct:   146 KETCHTLPQSATRAAMLVRVNTLLQGYSGIRFEILEAITSLLNHNISPSLPLRGTITASG 205

Query:   209 DLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALVNGTAV 266
             DLVPLSYIAGLLTGRPNSKATGP+GE + A+EA ++AG   GFF+LQPKEGLALVNGTAV
Sbjct:   206 DLVPLSYIAGLLTGRPNSKATGPDGESLTAKEAFEKAGISTGFFDLQPKEGLALVNGTAV 265

Query:   267 GSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHI 326
             GSG+ASMVLFEAN  A+L+E+LSAIFAEVM GKPEFTDHLTH+LKHHPGQIEAAAIMEHI
Sbjct:   266 GSGMASMVLFEANVQAVLAEVLSAIFAEVMSGKPEFTDHLTHRLKHHPGQIEAAAIMEHI 325

Query:   327 LDGSSYVNAAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDN 386
             LDGSSY+  A+K+HE+DPLQKPKQDRYALRTSPQWLGPQIEVIR ATKSIEREINSVNDN
Sbjct:   326 LDGSSYMKLAQKVHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRQATKSIEREINSVNDN 385

Query:   387 PLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLS 446
             PLIDVSRNKA+HGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNL+
Sbjct:   386 PLIDVSRNKAIHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLT 445

Query:   447 GGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEA 506
                NPSLDYGFKGAEIAMASYCSELQ+LANPVT+HVQSAEQHNQDVNSLGLISSRKT+EA
Sbjct:   446 ASSNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTSEA 505

Query:   507 VDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEK 566
             VDILKLMS+TFLV +CQA+DLRHLEENL+ TVKNTVSQVAKKVLT G +GELHPSRFCEK
Sbjct:   506 VDILKLMSTTFLVGICQAVDLRHLEENLRQTVKNTVSQVAKKVLTTGINGELHPSRFCEK 565

Query:   567 DLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEE 626
             DLLK  DRE VF Y+DDPCSATYPLMQ+LRQV+V+HAL+NGE EK A +SIFQKI AFEE
Sbjct:   566 DLLKVVDREQVFTYVDDPCSATYPLMQRLRQVIVDHALSNGETEKNAVTSIFQKIGAFEE 625

Query:   627 ELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEE 686
             ELK VLPKEVE AR    NG+  IPNRIKECRSYPLYR VREELG+  LTGEKV SPGEE
Sbjct:   626 ELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRFVREELGTKLLTGEKVVSPGEE 685

Query:   687 FDKVFTAMCQGKIIDPMLECLREWNGAPLPIC 718
             FDKVFTAMC+GK+IDP+++CL+EWNGAP+PIC
Sbjct:   686 FDKVFTAMCEGKLIDPLMDCLKEWNGAPIPIC 717


>TAIR|locus:2076244 [details] [associations]
            symbol:PAL4 "phenylalanine ammonia-lyase 4" species:3702
            "Arabidopsis thaliana" [GO:0003824 "catalytic activity"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM;IEA] [GO:0006559
            "L-phenylalanine catabolic process" evidence=IEA] [GO:0009058
            "biosynthetic process" evidence=IEA] [GO:0016841 "ammonia-lyase
            activity" evidence=IEA] [GO:0010413 "glucuronoxylan metabolic
            process" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
            evidence=RCA] InterPro:IPR001106 InterPro:IPR005922
            InterPro:IPR008948 InterPro:IPR022313 Pfam:PF00221 PROSITE:PS00488
            UniPathway:UPA00713 GO:GO:0005737 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0006559 Gene3D:1.10.275.10
            InterPro:IPR024083 SUPFAM:SSF48557 EMBL:AC009400 eggNOG:COG2986
            GO:GO:0009800 HOGENOM:HOG000214384 KO:K10775 ProtClustDB:PLN02457
            BRENDA:4.3.1.24 GO:GO:0045548 Gene3D:1.10.274.20 InterPro:IPR023144
            TIGRFAMs:TIGR01226 EMBL:AY303130 EMBL:AY099657 EMBL:BT000252
            IPI:IPI00533524 RefSeq:NP_187645.1 UniGene:At.18429
            UniGene:At.67148 ProteinModelPortal:Q9SS45 SMR:Q9SS45 IntAct:Q9SS45
            STRING:Q9SS45 PaxDb:Q9SS45 PRIDE:Q9SS45 EnsemblPlants:AT3G10340.1
            GeneID:820196 KEGG:ath:AT3G10340 TAIR:At3g10340 InParanoid:Q9SS45
            OMA:WRARIER PhylomeDB:Q9SS45 Genevestigator:Q9SS45
            GermOnline:AT3G10340 Uniprot:Q9SS45
        Length = 707

 Score = 2915 (1031.2 bits), Expect = 9.4e-304, P = 9.4e-304
 Identities = 570/705 (80%), Positives = 619/705 (87%)

Query:    19 LCKNNNYNYS-SGDALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAI 77
             LC  NN+  + SGD LNW   AE LKGSHL+EVKRMV EYRK  V LGGETLT+ QVAA+
Sbjct:     3 LCNQNNHITAVSGDPLNWNATAEALKGSHLDEVKRMVKEYRKEAVKLGGETLTIGQVAAV 62

Query:    78 ATSS--TNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKE 135
             A     + VEL+E AR GVKASS+WVMESMN+GTDSYGVTTGFGATSHRRTK GGALQ E
Sbjct:    63 ARGGGGSTVELAEEARAGVKASSEWVMESMNRGTDSYGVTTGFGATSHRRTKQGGALQNE 122

Query:   136 LIRFLNAGIFGNGT-ESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNI 194
             LIRFLNAGIFG G  ++SHTLP   TRAAMLVRVNTLLQGYSGIRFEILEAITKLLNH I
Sbjct:   123 LIRFLNAGIFGPGAGDTSHTLPKPTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHEI 182

Query:   195 TPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFG-FFELQ 253
             TPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA GP+GE + A EA K AG   FFELQ
Sbjct:   183 TPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPSGETLTASEAFKLAGVSSFFELQ 242

Query:   254 PKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHH 313
             PKEGLALVNGTAVGSGLAS VLF+AN LA+LSE++SA+FAEVMQGKPEFTDHLTHKLKHH
Sbjct:   243 PKEGLALVNGTAVGSGLASTVLFDANILAVLSEVMSAMFAEVMQGKPEFTDHLTHKLKHH 302

Query:   314 PGQIEAAAIMEHILDGSSYVNAAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFAT 373
             PGQIEAAAIMEHILDGSSYV  A+ LHE+DPLQKPKQDRYALRTSPQWLGPQIEVIR AT
Sbjct:   303 PGQIEAAAIMEHILDGSSYVKEAQLLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRAAT 362

Query:   374 KSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELV 433
             K IEREINSVNDNPLIDVSRNKALHGGNFQGTPIGV+MDN+RLAIA+IGKLMFAQFSELV
Sbjct:   363 KMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVAMDNSRLAIASIGKLMFAQFSELV 422

Query:   434 NDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVN 493
             NDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVN
Sbjct:   423 NDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVN 482

Query:   494 SLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVG 553
             SLGLISSRKTAEAVDILKLMS+T+LVALCQA+DLRHLEENLK  VK+ VSQVAK+VLTVG
Sbjct:   483 SLGLISSRKTAEAVDILKLMSTTYLVALCQAVDLRHLEENLKKAVKSAVSQVAKRVLTVG 542

Query:   554 ASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTA 613
             A+GELHPSRF E+D+L+  DRE+VF+Y DDPCS TYPLMQKLR +LV+HAL + E E  +
Sbjct:   543 ANGELHPSRFTERDVLQVVDREYVFSYADDPCSLTYPLMQKLRHILVDHALADPEREANS 602

Query:   614 NSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSN 673
              +S+F KI AFE ELK +LPKEVE  R   E G+  I NRIKECRSYPLYR VR+EL + 
Sbjct:   603 ATSVFHKIGAFEAELKLLLPKEVERVRVEYEEGTSAIANRIKECRSYPLYRFVRDELNTE 662

Query:   674 FLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGAPLPIC 718
              LTGE V SPGEEFDKVF A+  GK+IDP+LECL+EWNGAP+ IC
Sbjct:   663 LLTGENVRSPGEEFDKVFLAISDGKLIDPLLECLKEWNGAPVSIC 707


>ASPGD|ASPL0000000997 [details] [associations]
            symbol:AN6075 species:162425 "Emericella nidulans"
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006559 "L-phenylalanine
            catabolic process" evidence=IEA] [GO:0009058 "biosynthetic process"
            evidence=IEA] [GO:0016841 "ammonia-lyase activity" evidence=IEA]
            InterPro:IPR001106 InterPro:IPR005922 InterPro:IPR008948
            InterPro:IPR022313 Pfam:PF00221 PROSITE:PS00488 UniPathway:UPA00713
            GO:GO:0005737 EMBL:BN001301 EMBL:AACD01000104 GO:GO:0006559
            Gene3D:1.10.275.10 InterPro:IPR024083 SUPFAM:SSF48557
            eggNOG:COG2986 GO:GO:0009800 HOGENOM:HOG000214384 GO:GO:0045548
            TIGRFAMs:TIGR01226 RefSeq:XP_663679.1 ProteinModelPortal:Q5B055
            EnsemblFungi:CADANIAT00006942 GeneID:2871022 KEGG:ani:AN6075.2
            OMA:LALHHIG OrthoDB:EOG4J14HF Uniprot:Q5B055
        Length = 701

 Score = 892 (319.1 bits), Expect = 2.2e-89, P = 2.2e-89
 Identities = 223/637 (35%), Positives = 348/637 (54%)

Query:    62 VNLGGETLTVAQVAAIATSSTNVELSE--SAREGVKASSDWVMESMNKGTDSYGVTTGFG 119
             + + G  L +  V A+A  +   +++E  +  E + AS   + + +N+G   YGV TGFG
Sbjct:    37 IEIDGNRLDIPGVVAVACHNCIPKITEDPAVLENIDASIRLLKDRLNQGYSVYGVNTGFG 96

Query:   120 ATSHRRTKNGGALQKELIRFLNAGIF------GNGTE--SSHTLPHSATRAAMLVRVNTL 171
              ++  RT    ALQ  L++   AG+       GN  +   SH +P S  R  ML R N+ 
Sbjct:    97 GSADSRTDKMTALQSALLQLTQAGVLLESDKSGNQNKLLESHAMPASWVRGTMLARCNSN 156

Query:   172 LQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNS--KAT 229
             L+G+S ++  IL++I KLL H ITP +PLRG+I+ASGDL+PLSYIAG + G P+   +  
Sbjct:   157 LRGHSAVKLSILQSIVKLLQHRITPIVPLRGSISASGDLMPLSYIAGAIEGNPDVYVQVD 216

Query:   230 GPN-GEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEIL 288
             G +   I+ + E  + AG    +L PKEGL L+NGT+  + +AS+VL+E N L++L + L
Sbjct:   217 GLDMPRIMKSIEGLQYAGLEAQKLGPKEGLGLINGTSTSAAVASLVLYETNQLSVLVQAL 276

Query:   289 SAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNA--AKKLHEIDPLQ 346
             SA+  E + G  E        ++ H GQ+E A  +  +L GS  V     +K  +   L 
Sbjct:   277 SAMGLEALTGTAESYHPFISAVRPHDGQVECANNLLSLLRGSKLVQGLDGQKFQDRPGLI 336

Query:   347 KPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTP 406
                QDRYALR  PQW+GPQ+E +  A + +  E+NS  DNPL+DV       GGNFQ   
Sbjct:   337 ---QDRYALRCVPQWVGPQLEDLLLAHRQVTTELNSTCDNPLVDVKSKSIYSGGNFQAVS 393

Query:   407 IGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMAS 466
             I  +M+ TR  +   G+L+F+Q +E+++   NNGLP+NL    +PSL +  KG +I+MAS
Sbjct:   394 ITSAMEKTRQCLQMFGRLIFSQATEMIDPSINNGLPTNLVAD-DPSLSFTMKGVDISMAS 452

Query:   467 YCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAID 526
             Y +EL +L+NPV++HVQSAE  NQ +NS+ L+S+R + +AV++L LM +  +   CQA+D
Sbjct:   453 YMAELGYLSNPVSSHVQSAEMRNQAINSMALVSARYSMQAVEVLSLMCACDVYICCQALD 512

Query:   527 LRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCS 586
             LR L           +  V ++VL          S F  +  L+  +R      +D   +
Sbjct:   513 LRVLHNTFLEKAIPQLHSVTERVL----------SPFLPQPALEDLNRS-----LDQHLT 557

Query:   587 ATYPLMQKLR-----QVLVEHALNNG-ENEKTANSSIFQKIAAFEEELKTVLPKEVENAR 640
              T+P+  +L        ++E A+    EN K+        +  ++ + + +L    +   
Sbjct:   558 QTWPMTNRLSPADRVHTVIEKAIPVLLENLKSHRGPSLGDLETWKSQARNLLNVVYQEIA 617

Query:   641 QTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTG 677
             ++     P   + + E  +  LY +VR+ELG  F  G
Sbjct:   618 ESFFV-KPHTADYLGE-GAKALYVMVRQELGIPFHQG 652


>ASPGD|ASPL0000017810 [details] [associations]
            symbol:AN3897 species:162425 "Emericella nidulans"
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006559 "L-phenylalanine
            catabolic process" evidence=IEA] [GO:0009058 "biosynthetic process"
            evidence=IEA] [GO:0016841 "ammonia-lyase activity" evidence=IEA]
            InterPro:IPR001106 InterPro:IPR005922 InterPro:IPR008948
            InterPro:IPR022313 Pfam:PF00221 PROSITE:PS00488 UniPathway:UPA00713
            GO:GO:0005737 EMBL:BN001302 GO:GO:0006559 Gene3D:1.10.275.10
            InterPro:IPR024083 SUPFAM:SSF48557 GO:GO:0009800
            HOGENOM:HOG000214384 GO:GO:0045548 TIGRFAMs:TIGR01226
            EnsemblFungi:CADANIAT00004804 OMA:LTPLAHM Uniprot:C8V6B1
        Length = 686

 Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
 Identities = 224/669 (33%), Positives = 345/669 (51%)

Query:    62 VNLGGETLTVAQVAAIATSSTNVELSE--SAREGVKASSDWVMESMNKGTDSYGVTTGFG 119
             V+L G +L ++   A++     V +++  S    ++AS   + + + +G   YGV +GFG
Sbjct:    29 VHLDGHSLRLSDAVAVSKYDARVRVTDDPSVLSCMEASVALLDKRLAEGRVVYGVNSGFG 88

Query:   120 ATSHRRTKNGGALQKELIRFLNAGIF-----GNGTES------SHTLPHSATRAAMLVRV 168
               +  RT     LQK LI+  N  +      G    S      +H++P    +AAM+ R 
Sbjct:    89 GNADTRTNAHEDLQKALIQHHNTAVVLPSDKGQTCSSIIRSLPAHSIPIPIVKAAMVARC 148

Query:   169 NTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNS-- 226
             N+L++G+S +R +I+  +  ++N + TP +PLRG+I+ASGDL PL+YIAG L G P+   
Sbjct:   149 NSLIRGHSAVRIDIVRNLATMINEDYTPVVPLRGSISASGDLTPLAYIAGALEGNPDIYV 208

Query:   227 KATGPNGE-IIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLS 285
             +  G   + I+ A  A K+ G      +PKE L L+NGTA  +G AS+VLFEAN L LL+
Sbjct:   209 QCGGTKDDKIVTADAALKELGLEPLTFRPKEALGLLNGTAFSTGAASLVLFEANQLILLT 268

Query:   286 EILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHEIDPL 345
             ++L+A+  E + G     D    + + HPGQ E AA +   L  S         H+  P 
Sbjct:   269 QVLTAMTTEALLGTMRNFDPFIAEARPHPGQKEVAANIFRFLSDSQLTTD----HDHSPS 324

Query:   346 QKP-KQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQG 404
                  QDRY LRT+ QW+GP +E +  A   +  E+NS  DNPL DV+ +   HGGNFQ 
Sbjct:   325 DNDLAQDRYPLRTASQWIGPHVENMALAQAQVAIELNSTTDNPLFDVANDTIHHGGNFQA 384

Query:   405 TPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAM 464
               I  +M+ T  A+  +GKL+F Q SEL+N   + GLP NL    +PSL +  KG +I M
Sbjct:   385 MSITSAMEKTTSAMQTLGKLVFGQCSELINPMLSKGLPPNLCAD-DPSLSFALKGVDINM 443

Query:   465 ASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQA 524
             ASY SEL +L NPV+N VQSA+ +NQ VNSL LI +R  A+AV++  LM+++ + ALCQA
Sbjct:   444 ASYMSELGYLNNPVSNFVQSADVNNQVVNSLALIGARYAADAVEVFSLMAASHIYALCQA 503

Query:   525 IDLRHLEENL-----KHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREH-VF 578
             +DLR +         KH V+ T S +  + LT      L        +     D E    
Sbjct:   504 VDLREIHRTFETIARKHVVEYT-SDLFGQSLTDNDINTLWGELMRHWNCTATLDLEQRAT 562

Query:   579 AYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVEN 638
               +       + L  K     ++  +   E + T    +    AA  +   T  P     
Sbjct:   563 TAVSQTMGTLFILSSKPSSPSIDGNVVR-EWQSTVTDLLKYHCAANRKAYFTDPP----- 616

Query:   639 ARQTVENGSPTIPNRIKECRSYPLYR-LVREELGSNFLTGEKVTSPGEEFDKVFTAMCQG 697
               + + + S  I N +++    P+++ LV      +   G+K T  G     ++ A+ +G
Sbjct:   617 TGKLLCSSSAKIYNFVRDTLKVPMHKGLVDHPTYPSGCEGDKRTI-GSHIGTIYAALREG 675

Query:   698 KIIDPMLEC 706
             + +  + +C
Sbjct:   676 QFMSVLADC 684


>TIGR_CMR|SO_4374 [details] [associations]
            symbol:SO_4374 "histidine ammonia-lyase, putative"
            species:211586 "Shewanella oneidensis MR-1" [GO:0004397 "histidine
            ammonia-lyase activity" evidence=ISS] [GO:0006548 "histidine
            catabolic process" evidence=ISS] InterPro:IPR001106
            InterPro:IPR008948 InterPro:IPR022313 Pfam:PF00221 PROSITE:PS00488
            GO:GO:0009058 EMBL:AE014299 GenomeReviews:AE014299_GR
            Gene3D:1.10.275.10 InterPro:IPR024083 SUPFAM:SSF48557 KO:K01745
            GO:GO:0045548 OMA:RQFIETE GO:GO:0052883 RefSeq:NP_719898.1
            ProteinModelPortal:Q8E9B0 GeneID:1171976 KEGG:son:SO_4374
            PATRIC:23528405 HOGENOM:HOG000237621 ProtClustDB:CLSK907616
            Uniprot:Q8E9B0
        Length = 521

 Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
 Identities = 136/393 (34%), Positives = 218/393 (55%)

Query:   161 RAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLL 220
             RA M  R+N+L  G SG+ +E+L+ I  LLN NI P +P  G++ ASGDL PLSY+A +L
Sbjct:   110 RAVMACRLNSLAIGKSGVTYELLKRIQTLLNLNIVPVIPEEGSVGASGDLTPLSYLAAVL 169

Query:   221 TGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANN 280
              G    +     GE    +E   +       L+PKEGLAL+NGTAV + LA +    A  
Sbjct:   170 VGE---REVIYQGERRATKEVYHELNITPHVLRPKEGLALMNGTAVMTALACLAFDRAQY 226

Query:   281 LALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLH 340
             LA L+  ++A+ +  ++G     D +    K HPGQ + A  +   L+           H
Sbjct:   227 LARLASRITAMASLTLKGNSNHFDDILFAAKPHPGQNQIATWIREDLN-----------H 275

Query:   341 EIDPLQKPK-QDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHG 399
              + P    + QDRY++R +P  +G   + + F  + IE E+NS NDNP++D      LHG
Sbjct:   276 HVHPRNSDRLQDRYSIRCAPHIIGVLQDALPFMRQFIETEVNSANDNPIVDAEGEHILHG 335

Query:   400 GNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNP--SLDYGF 457
             G+F G  I  +MD+ +  +A I  L+  Q + +++  +NNGLP+NLSG   P  ++++GF
Sbjct:   336 GHFYGGHIAFAMDSLKNIVANIADLIDRQMALVMDPKFNNGLPANLSGSTGPRRAINHGF 395

Query:   458 KGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTF 517
             K  +I ++++ +E      P +   +S E HNQD  S+G I++R     + + + +++  
Sbjct:   396 KAVQIGVSAWTAEALKHTMPASVFSRSTECHNQDKVSMGTIAARDCMRVLQLTEQVAAAA 455

Query:   518 LVALCQAIDLR----HLEE-NLKHTVKNTVSQV 545
             L+A+ Q IDLR     L+E +L  ++  T++QV
Sbjct:   456 LLAMTQGIDLRITQNELDEASLTPSLATTLAQV 488

 Score = 311 (114.5 bits), Expect = 7.2e-25, P = 7.2e-25
 Identities = 92/283 (32%), Positives = 145/283 (51%)

Query:    62 VNLGGETLTVAQVAAIATSSTNVELSESA--REGVKASSDWVMESMNKGTDSYGVTTGFG 119
             +  G + LT+ QV A+A  +  V+L + A  +E ++  + ++   +++    YGVTTG+G
Sbjct:    15 IEFGRQLLTLEQVVAVAKGA-KVKLCDDADYQEYIQKGARFIDSLLHEEGVVYGVTTGYG 73

Query:   120 ATSHRRTKNGGA-LQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGI 178
              +    T N    L  EL   L+   F +G      L     RA M  R+N+L  G SG+
Sbjct:    74 DSC---TVNVSLDLVHELPLHLSR--F-HGCGLGEVLSVMQARAVMACRLNSLAIGKSGV 127

Query:   179 RFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDA 238
              +E+L+ I  LLN NI P +P  G++ ASGDL PLSY+A +L G    +     GE    
Sbjct:   128 TYELLKRIQTLLNLNIVPVIPEEGSVGASGDLTPLSYLAAVLVGE---REVIYQGERRAT 184

Query:   239 QEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQG 298
             +E   +       L+PKEGLAL+NGTAV + LA +    A  LA L+  ++A+ +  ++G
Sbjct:   185 KEVYHELNITPHVLRPKEGLALMNGTAVMTALACLAFDRAQYLARLASRITAMASLTLKG 244

Query:   299 KPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHE 341
                  D +    K HPGQ + A  +   L+   +   + +L +
Sbjct:   245 NSNHFDDILFAAKPHPGQNQIATWIREDLNHHVHPRNSDRLQD 287


>UNIPROTKB|Q9KSQ4 [details] [associations]
            symbol:hutH "Histidine ammonia-lyase" species:243277
            "Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004397
            "histidine ammonia-lyase activity" evidence=ISS] [GO:0006520
            "cellular amino acid metabolic process" evidence=ISS]
            HAMAP:MF_00229 InterPro:IPR001106 InterPro:IPR005921
            InterPro:IPR008948 InterPro:IPR022313 Pfam:PF00221 PROSITE:PS00488
            UniPathway:UPA00379 GO:GO:0005737 GO:GO:0009058 GO:GO:0006520
            EMBL:AE003852 GenomeReviews:AE003852_GR Gene3D:1.10.275.10
            InterPro:IPR024083 SUPFAM:SSF48557 GO:GO:0019556 GO:GO:0019557
            eggNOG:COG2986 GO:GO:0004397 KO:K01745 ProtClustDB:PRK09367
            TIGRFAMs:TIGR01225 OMA:FLRPLKT PIR:E82228 RefSeq:NP_230847.1
            ProteinModelPortal:Q9KSQ4 SMR:Q9KSQ4 DNASU:2614635 GeneID:2614635
            KEGG:vch:VC1202 PATRIC:20081492 Uniprot:Q9KSQ4
        Length = 511

 Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
 Identities = 145/462 (31%), Positives = 243/462 (52%)

Query:    69 LTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRT-- 126
             L++ Q+  ++ S   + L   A   +  S+  V + +++G   YG+ TGFG  ++ +   
Sbjct:    11 LSLKQLRQVSRSPVVLSLDPEAIPAIAESAQVVEQVISEGRTVYGINTGFGLLANTKIAP 70

Query:   127 KNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAI 186
             ++   LQK ++    AGI          +     R  ML+++N+L +GYSGIR E+++A+
Sbjct:    71 QDLETLQKSIVLSHAAGI-------GELMSDETVRLMMLLKINSLARGYSGIRLEVIQAL 123

Query:   187 TKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAG 246
              +L+N+ I PC+P +G++ ASGDL PL++++ +L G   ++    NG+II   EA K AG
Sbjct:   124 IELVNNQIYPCVPKKGSVGASGDLAPLAHMSTVLLGEGQARY---NGKIISGLEAMKIAG 180

Query:   247 FGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHL 306
                  L PKEGLAL+NGT   +  A   LF A +L   + +  A+  E   G     D  
Sbjct:   181 LEPITLAPKEGLALLNGTQASTAFALEGLFVAEDLFASATVCGAMSVEAALGSRRPFDPR 240

Query:   307 THKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHEIDPLQKPKQDRYALRTSPQWLGPQI 366
              H+++ H  Q++AA    H+LD SS +  +   H     +K  QD Y+LR  PQ +G  +
Sbjct:   241 IHRVRGHRTQMDAATAYRHLLDVSSEIGQS---HS--NCEKV-QDPYSLRCQPQVMGACL 294

Query:   367 EVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMF 426
             + IR A + +E E NSV+DNPL+       + GGNF   P+ ++ DN  LAIA IG L  
Sbjct:   295 QQIRSAAEVLEVEANSVSDNPLVFAEDGDIISGGNFHAEPVAMAADNLALAIAEIGSLSE 354

Query:   427 AQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAE 486
              + + L++   +  LP  L    N  ++ GF  A++  A+  SE + LA+P +       
Sbjct:   355 RRMALLIDSALSK-LPPFLVD--NGGVNSGFMIAQVTAAALASENKTLAHPASVDSLPTS 411

Query:   487 QHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLR 528
              + +D  S+   ++R+  +  +  + + +   +A  Q +D R
Sbjct:   412 ANQEDHVSMATFAARRLRDMGENTRGILAVEYLAAAQGLDFR 453


>TIGR_CMR|VC_1202 [details] [associations]
            symbol:VC_1202 "histidine ammonia-lyase" species:686
            "Vibrio cholerae O1 biovar El Tor" [GO:0004397 "histidine
            ammonia-lyase activity" evidence=ISS] [GO:0006520 "cellular amino
            acid metabolic process" evidence=ISS] HAMAP:MF_00229
            InterPro:IPR001106 InterPro:IPR005921 InterPro:IPR008948
            InterPro:IPR022313 Pfam:PF00221 PROSITE:PS00488 UniPathway:UPA00379
            GO:GO:0005737 GO:GO:0009058 GO:GO:0006520 EMBL:AE003852
            GenomeReviews:AE003852_GR Gene3D:1.10.275.10 InterPro:IPR024083
            SUPFAM:SSF48557 GO:GO:0019556 GO:GO:0019557 eggNOG:COG2986
            GO:GO:0004397 KO:K01745 ProtClustDB:PRK09367 TIGRFAMs:TIGR01225
            OMA:FLRPLKT PIR:E82228 RefSeq:NP_230847.1 ProteinModelPortal:Q9KSQ4
            SMR:Q9KSQ4 DNASU:2614635 GeneID:2614635 KEGG:vch:VC1202
            PATRIC:20081492 Uniprot:Q9KSQ4
        Length = 511

 Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
 Identities = 145/462 (31%), Positives = 243/462 (52%)

Query:    69 LTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRT-- 126
             L++ Q+  ++ S   + L   A   +  S+  V + +++G   YG+ TGFG  ++ +   
Sbjct:    11 LSLKQLRQVSRSPVVLSLDPEAIPAIAESAQVVEQVISEGRTVYGINTGFGLLANTKIAP 70

Query:   127 KNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAI 186
             ++   LQK ++    AGI          +     R  ML+++N+L +GYSGIR E+++A+
Sbjct:    71 QDLETLQKSIVLSHAAGI-------GELMSDETVRLMMLLKINSLARGYSGIRLEVIQAL 123

Query:   187 TKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAG 246
              +L+N+ I PC+P +G++ ASGDL PL++++ +L G   ++    NG+II   EA K AG
Sbjct:   124 IELVNNQIYPCVPKKGSVGASGDLAPLAHMSTVLLGEGQARY---NGKIISGLEAMKIAG 180

Query:   247 FGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHL 306
                  L PKEGLAL+NGT   +  A   LF A +L   + +  A+  E   G     D  
Sbjct:   181 LEPITLAPKEGLALLNGTQASTAFALEGLFVAEDLFASATVCGAMSVEAALGSRRPFDPR 240

Query:   307 THKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHEIDPLQKPKQDRYALRTSPQWLGPQI 366
              H+++ H  Q++AA    H+LD SS +  +   H     +K  QD Y+LR  PQ +G  +
Sbjct:   241 IHRVRGHRTQMDAATAYRHLLDVSSEIGQS---HS--NCEKV-QDPYSLRCQPQVMGACL 294

Query:   367 EVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMF 426
             + IR A + +E E NSV+DNPL+       + GGNF   P+ ++ DN  LAIA IG L  
Sbjct:   295 QQIRSAAEVLEVEANSVSDNPLVFAEDGDIISGGNFHAEPVAMAADNLALAIAEIGSLSE 354

Query:   427 AQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAE 486
              + + L++   +  LP  L    N  ++ GF  A++  A+  SE + LA+P +       
Sbjct:   355 RRMALLIDSALSK-LPPFLVD--NGGVNSGFMIAQVTAAALASENKTLAHPASVDSLPTS 411

Query:   487 QHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLR 528
              + +D  S+   ++R+  +  +  + + +   +A  Q +D R
Sbjct:   412 ANQEDHVSMATFAARRLRDMGENTRGILAVEYLAAAQGLDFR 453


>UNIPROTKB|B8ZV93 [details] [associations]
            symbol:tam "Tyrosine 2,3-aminomutase" species:33
            "Myxococcus fulvus" [GO:0009403 "toxin biosynthetic process"
            evidence=IDA] [GO:0016841 "ammonia-lyase activity" evidence=IDA]
            [GO:0050368 "tyrosine 2,3-aminomutase activity" evidence=IDA]
            [GO:0004397 "histidine ammonia-lyase activity" evidence=IDA]
            InterPro:IPR001106 InterPro:IPR008948 InterPro:IPR022313
            Pfam:PF00221 PROSITE:PS00488 Gene3D:1.10.275.10 InterPro:IPR024083
            SUPFAM:SSF48557 GO:GO:0009403 GO:GO:0016841 GO:GO:0050368
            GO:GO:0052883 EMBL:FM212243 Uniprot:B8ZV93
        Length = 526

 Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
 Identities = 159/481 (33%), Positives = 239/481 (49%)

Query:    74 VAAIATSSTNVELSESAREGVKAS----SDWVMESMNKGTDSYGVTTGFGATSHR--RTK 127
             + A+A     VEL  +  E V+A+      W ME        YGV TGFG   +     +
Sbjct:     3 IYAVAVGRVGVELDAAQLERVRATHLRVQGWGMEKY----PMYGVNTGFGELINVIIPPQ 58

Query:   128 NGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAIT 187
                 LQ  L+R   AG    G E     P    RA M VR+N L++GYSGI  E L+ + 
Sbjct:    59 FKSDLQHNLLRSHAAG----GGEP---FPDEVVRAIMTVRINCLMKGYSGISPEALQLLA 111

Query:   188 KLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGF 247
              +LN  I P +P++G++ ASGDL PLS++A  L G  + +    NG      E  ++ G 
Sbjct:   112 TMLNRGIHPVIPMQGSLGASGDLAPLSHMALPLIGDGHVRK---NGVTRPTMEVFQEEGL 168

Query:   248 GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLT 307
                +L  KEGLALVNGT+  +G AS+ L+ A +L  LS + SA   + M        H  
Sbjct:   169 TPLKLGFKEGLALVNGTSAMTGAASLALYRARHLLRLSLLASADIVQAMNASTRPFSHTG 228

Query:   308 HKLKHHPGQIEAAAIMEHILDGSSYVN---------AAKKLH--EIDPLQKPKQDRYALR 356
             + LK+HPGQ+  A +M  +  G+  +          + +  H  +++  +   Q+ Y+LR
Sbjct:   229 NALKNHPGQVVIARLMRDLTQGTGLMRDHQDIMRAISERTSHSNDVEETEIYLQNAYSLR 288

Query:   357 TSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRL 416
               PQ LG  +E ++   + IE E NSVNDNP+I  +  +  HG NF G  + ++ D   +
Sbjct:   289 CMPQVLGVVLETLQMCQRFIEEEANSVNDNPVILDTPAETYHGANFHGQYVAMACDYLSI 348

Query:   417 AIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLAN 476
             A+A +G L   Q + L++   N  LP  L+  +   L  GF+G +    S  SE   LA 
Sbjct:   349 AVAEMGVLAERQLNRLLDPHINKPLPGFLAHAKT-GLFCGFEGGQYLATSIASENLDLAA 407

Query:   477 PVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKH 536
             P +     +   NQD+ S+GLI++RKT    + +  + S  + AL QA    H  E  K+
Sbjct:   408 PSSIKSIPSNGQNQDIVSMGLIAARKTLALCENVGTILSVLMAALNQA---SHFTEAAKY 464

Query:   537 T 537
             +
Sbjct:   465 S 465


>UNIPROTKB|B8ZV94 [details] [associations]
            symbol:tam "Tyrosine 2,3-aminomutase" species:563923
            "Myxococcus sp. Mx-B0" [GO:0009403 "toxin biosynthetic process"
            evidence=IDA] [GO:0016841 "ammonia-lyase activity" evidence=IDA]
            [GO:0050368 "tyrosine 2,3-aminomutase activity" evidence=IDA]
            [GO:0004397 "histidine ammonia-lyase activity" evidence=IDA]
            InterPro:IPR001106 InterPro:IPR008948 InterPro:IPR022313
            Pfam:PF00221 PROSITE:PS00488 Gene3D:1.10.275.10 InterPro:IPR024083
            SUPFAM:SSF48557 GO:GO:0009403 GO:GO:0016841 GO:GO:0050368
            GO:GO:0052883 EMBL:FM212244 Uniprot:B8ZV94
        Length = 526

 Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
 Identities = 158/481 (32%), Positives = 240/481 (49%)

Query:    74 VAAIATSSTNVELSESAREGVKAS----SDWVMESMNKGTDSYGVTTGFGATSHR--RTK 127
             + A+A     VEL  +  E V+A+      W ME        YGV TGFG   +     +
Sbjct:     3 IYAVAVGRVGVELDAAQLERVRATHLRVQGWGMEKY----PMYGVNTGFGELINVIIPPQ 58

Query:   128 NGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAIT 187
                 LQ  L+R   AG    G E     P    RA M VR+N L++GYSGI  E L+ + 
Sbjct:    59 FKSDLQHNLLRSHAAG----GGEP---FPDEVVRAIMTVRINCLMKGYSGISPEALQLLA 111

Query:   188 KLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGF 247
              +LN  I P +P++G++ ASGDL PLS++A  L G  + +    NG      E  ++ G 
Sbjct:   112 TMLNRGIHPVIPMQGSLGASGDLAPLSHMALPLIGDGHVRK---NGVTRPTMEVFQEEGL 168

Query:   248 GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLT 307
                +L  KEGLALVNGT+  +G AS+ L+ A +L  LS + SA   + M        H  
Sbjct:   169 TPLKLGFKEGLALVNGTSAMTGAASLALYRARHLLRLSLLASADIVQAMNASTRPFSHTG 228

Query:   308 HKLKHHPGQIEAAAIMEHILDGSSYVN---------AAKKLH--EIDPLQKPKQDRYALR 356
             + +K+HPGQ+  A +M  + +G+  +          + +  H  +++  +   Q+ Y+LR
Sbjct:   229 NAVKNHPGQVVIARLMRDLTEGTGLMRDHQDIMRAISERTSHSNDVEETEIYLQNAYSLR 288

Query:   357 TSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRL 416
               PQ LG  +E ++   + IE E NSVNDNP+I  +  +  HG NF G  + ++ D   +
Sbjct:   289 CMPQVLGVVLETLQMCQRFIEEEANSVNDNPVILDTPAETYHGANFHGQYVAMACDYLSI 348

Query:   417 AIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLAN 476
             A+A +G L   Q + L++   N  LP  L+  +   L  GF+G +    S  SE   LA 
Sbjct:   349 AVAEMGVLAERQLNRLLDPHINKPLPGFLAHAKT-GLFCGFEGGQYLATSIASENLDLAA 407

Query:   477 PVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKH 536
             P +     +   NQD+ S+GLI++RKT    + +  + S  + AL QA    H  E  K+
Sbjct:   408 PSSIKSIPSNGQNQDIVSMGLIAARKTLALCENVGTILSVLMAALNQA---SHFTEAAKY 464

Query:   537 T 537
             +
Sbjct:   465 S 465


>DICTYBASE|DDB_G0273787 [details] [associations]
            symbol:DDB_G0273787 "putative histidine
            ammonia-lyase" species:44689 "Dictyostelium discoideum" [GO:0016841
            "ammonia-lyase activity" evidence=IEA] [GO:0009058 "biosynthetic
            process" evidence=IEA] [GO:0003824 "catalytic activity"
            evidence=IEA] [GO:0004397 "histidine ammonia-lyase activity"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0016829 "lyase activity" evidence=IEA] [GO:0006547 "histidine
            metabolic process" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0019557 "histidine catabolic process to glutamate
            and formate" evidence=IEA] [GO:0019556 "histidine catabolic process
            to glutamate and formamide" evidence=IEA] InterPro:IPR001106
            InterPro:IPR008948 InterPro:IPR022313 Pfam:PF00221 PROSITE:PS00488
            UniPathway:UPA00379 dictyBase:DDB_G0273787 dictyBase:DDB_G0273081
            GO:GO:0005737 GO:GO:0009058 EMBL:AAFI02000011 EMBL:AAFI02000009
            Gene3D:1.10.275.10 InterPro:IPR024083 SUPFAM:SSF48557 GO:GO:0019556
            GO:GO:0019557 RefSeq:XP_644510.1 RefSeq:XP_644740.1
            ProteinModelPortal:Q556V9 STRING:Q556V9 EnsemblProtists:DDB0231725
            EnsemblProtists:DDB0304843 GeneID:8618840 GeneID:8619136
            KEGG:ddi:DDB_G0273081 KEGG:ddi:DDB_G0273787 eggNOG:COG2986
            InParanoid:Q556V9 OMA:MGNHIAR ProtClustDB:CLSZ2429936 GO:GO:0004397
            Uniprot:Q556V9
        Length = 529

 Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
 Identities = 161/513 (31%), Positives = 250/513 (48%)

Query:    53 MVAEYRKPVVNLGGET--LTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTD 110
             M+    K    + GE   L +  + +I+    N+  +    E ++   D +   + +   
Sbjct:     1 MIETNHKDNFLIDGENKNLEINDIISISKGEKNIIFTNELLEFLQKGRDQLENKLKENVA 60

Query:   111 SYGVTTGFGATSHRRTKNGGA--LQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRV 168
              YG+ TGFG               Q  L+ FL  G  G+     +       R    + +
Sbjct:    61 IYGINTGFGGNGDLIIPFDKLDYHQSNLLDFLTCGT-GDFFNDQYV------RGIQFIII 113

Query:   169 NTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA 228
               L +G+SG+R  +++ + K LN  I P +P+ G++ ASGDLVPLSYIA +L G+   K 
Sbjct:   114 IALSRGWSGVRPMVIQTLAKHLNKGIIPQVPMHGSVGASGDLVPLSYIANVLCGKGMVKY 173

Query:   229 TGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVL--FEANNLALLSE 286
                N ++++A +A K        L+ KEGLALVNGT V S ++ + +  FE    A +  
Sbjct:   174 ---NEKLMNASDALKITSIEPLVLKSKEGLALVNGTRVMSSVSCISINKFETIFKAAIGS 230

Query:   287 ILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKL-----HE 341
             I  A+  E +    +  D   H LK+HPGQI  A I+    + S     +  +       
Sbjct:   231 IALAV--EGLLASKDHYDMRIHNLKNHPGQILIAQILNKYFNTSDNNTKSSNITFNQSEN 288

Query:   342 IDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGN 401
             +  L K  Q+ Y+LR +PQ LG   E I  A   I+REI SVNDNPLID      L GGN
Sbjct:   289 VQKLDKSVQEVYSLRCAPQILGIISENISNAKIVIKREILSVNDNPLIDPYYGDVLSGGN 348

Query:   402 FQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAE 461
             F G  I   MD  +L I+ +   + +  + +++  ++ GLP++LS   NP +  G+KG +
Sbjct:   349 FMGNHIARIMDGIKLDISLVANHLHSLVALMMHSEFSKGLPNSLSP--NPGIYQGYKGMQ 406

Query:   462 IAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEA-VDILKLMSSTFLVA 520
             I+  S    L+  A P   H  + EQ NQD+ SLGL S+   A   + +  ++S T ++A
Sbjct:   407 ISQTSLVVWLRQEAAPACIHSLTTEQFNQDIVSLGLHSANGAASMLIKLCDIVSMTLIIA 466

Query:   521 LCQAIDLRHLE-ENLKHTVKNTVSQVAKKVLTV 552
               QAI LR    EN K  + N V ++   ++ +
Sbjct:   467 F-QAISLRMKSIENFK--LPNKVQKLYSSIIKI 496


>DICTYBASE|DDB_G0273081 [details] [associations]
            symbol:DDB_G0273081 "putative histidine
            ammonia-lyase" species:44689 "Dictyostelium discoideum" [GO:0016841
            "ammonia-lyase activity" evidence=IEA] [GO:0009058 "biosynthetic
            process" evidence=IEA] [GO:0003824 "catalytic activity"
            evidence=IEA] [GO:0004397 "histidine ammonia-lyase activity"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0016829 "lyase activity" evidence=IEA] [GO:0006547 "histidine
            metabolic process" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0019557 "histidine catabolic process to glutamate
            and formate" evidence=IEA] [GO:0019556 "histidine catabolic process
            to glutamate and formamide" evidence=IEA] InterPro:IPR001106
            InterPro:IPR008948 InterPro:IPR022313 Pfam:PF00221 PROSITE:PS00488
            UniPathway:UPA00379 dictyBase:DDB_G0273787 dictyBase:DDB_G0273081
            GO:GO:0005737 GO:GO:0009058 EMBL:AAFI02000011 EMBL:AAFI02000009
            Gene3D:1.10.275.10 InterPro:IPR024083 SUPFAM:SSF48557 GO:GO:0019556
            GO:GO:0019557 RefSeq:XP_644510.1 RefSeq:XP_644740.1
            ProteinModelPortal:Q556V9 STRING:Q556V9 EnsemblProtists:DDB0231725
            EnsemblProtists:DDB0304843 GeneID:8618840 GeneID:8619136
            KEGG:ddi:DDB_G0273081 KEGG:ddi:DDB_G0273787 eggNOG:COG2986
            InParanoid:Q556V9 OMA:MGNHIAR ProtClustDB:CLSZ2429936 GO:GO:0004397
            Uniprot:Q556V9
        Length = 529

 Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
 Identities = 161/513 (31%), Positives = 250/513 (48%)

Query:    53 MVAEYRKPVVNLGGET--LTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTD 110
             M+    K    + GE   L +  + +I+    N+  +    E ++   D +   + +   
Sbjct:     1 MIETNHKDNFLIDGENKNLEINDIISISKGEKNIIFTNELLEFLQKGRDQLENKLKENVA 60

Query:   111 SYGVTTGFGATSHRRTKNGGA--LQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRV 168
              YG+ TGFG               Q  L+ FL  G  G+     +       R    + +
Sbjct:    61 IYGINTGFGGNGDLIIPFDKLDYHQSNLLDFLTCGT-GDFFNDQYV------RGIQFIII 113

Query:   169 NTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA 228
               L +G+SG+R  +++ + K LN  I P +P+ G++ ASGDLVPLSYIA +L G+   K 
Sbjct:   114 IALSRGWSGVRPMVIQTLAKHLNKGIIPQVPMHGSVGASGDLVPLSYIANVLCGKGMVKY 173

Query:   229 TGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVL--FEANNLALLSE 286
                N ++++A +A K        L+ KEGLALVNGT V S ++ + +  FE    A +  
Sbjct:   174 ---NEKLMNASDALKITSIEPLVLKSKEGLALVNGTRVMSSVSCISINKFETIFKAAIGS 230

Query:   287 ILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKL-----HE 341
             I  A+  E +    +  D   H LK+HPGQI  A I+    + S     +  +       
Sbjct:   231 IALAV--EGLLASKDHYDMRIHNLKNHPGQILIAQILNKYFNTSDNNTKSSNITFNQSEN 288

Query:   342 IDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGN 401
             +  L K  Q+ Y+LR +PQ LG   E I  A   I+REI SVNDNPLID      L GGN
Sbjct:   289 VQKLDKSVQEVYSLRCAPQILGIISENISNAKIVIKREILSVNDNPLIDPYYGDVLSGGN 348

Query:   402 FQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAE 461
             F G  I   MD  +L I+ +   + +  + +++  ++ GLP++LS   NP +  G+KG +
Sbjct:   349 FMGNHIARIMDGIKLDISLVANHLHSLVALMMHSEFSKGLPNSLSP--NPGIYQGYKGMQ 406

Query:   462 IAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEA-VDILKLMSSTFLVA 520
             I+  S    L+  A P   H  + EQ NQD+ SLGL S+   A   + +  ++S T ++A
Sbjct:   407 ISQTSLVVWLRQEAAPACIHSLTTEQFNQDIVSLGLHSANGAASMLIKLCDIVSMTLIIA 466

Query:   521 LCQAIDLRHLE-ENLKHTVKNTVSQVAKKVLTV 552
               QAI LR    EN K  + N V ++   ++ +
Sbjct:   467 F-QAISLRMKSIENFK--LPNKVQKLYSSIIKI 496


>TIGR_CMR|CPS_0908 [details] [associations]
            symbol:CPS_0908 "histidine ammonia-lyase" species:167879
            "Colwellia psychrerythraea 34H" [GO:0004397 "histidine
            ammonia-lyase activity" evidence=ISS] [GO:0006548 "histidine
            catabolic process" evidence=ISS] HAMAP:MF_00229 InterPro:IPR001106
            InterPro:IPR005921 InterPro:IPR008948 InterPro:IPR022313
            Pfam:PF00221 PROSITE:PS00488 UniPathway:UPA00379 GO:GO:0005737
            GO:GO:0009058 EMBL:CP000083 GenomeReviews:CP000083_GR
            Gene3D:1.10.275.10 InterPro:IPR024083 SUPFAM:SSF48557 GO:GO:0019556
            GO:GO:0019557 eggNOG:COG2986 GO:GO:0004397 HOGENOM:HOG000237619
            KO:K01745 ProtClustDB:PRK09367 TIGRFAMs:TIGR01225 OMA:FLRPLKT
            RefSeq:YP_267657.1 ProteinModelPortal:Q487V8 SMR:Q487V8
            STRING:Q487V8 GeneID:3518752 KEGG:cps:CPS_0908 PATRIC:21465099
            BioCyc:CPSY167879:GI48-994-MONOMER Uniprot:Q487V8
        Length = 514

 Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
 Identities = 151/484 (31%), Positives = 237/484 (48%)

Query:    69 LTVAQVAAIAT-SSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTK 127
             LT+AQ+  +         L ESA   +  S++ V + +      YG+ TGFG  +  R K
Sbjct:    14 LTLAQLRDVNRFDGIKYSLDESAFSEINKSANAVQQVIKDNRVVYGINTGFGLLASTRIK 73

Query:   128 NGGA--LQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEA 185
             N     LQ+ ++   +AG FG   E S        R  M++++N+L +G+SGIR ++++A
Sbjct:    74 NEELELLQRSIVLSHSAG-FGEYMEDS------TVRLMMVLKINSLSRGFSGIRLQVIQA 126

Query:   186 ITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQA 245
             +  LLN  + PC+P +G++ ASGDL PLS++   L G           ++I A E  K A
Sbjct:   127 LITLLNAEVYPCVPKKGSVGASGDLAPLSHMVLPLLGEGEMSY---QDQVIPAAEGLKIA 183

Query:   246 GFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDH 305
             G     L  KEGLAL+NGT   +  +   LF A +L     ++ +I  E   G     DH
Sbjct:   184 GLEVVTLAAKEGLALLNGTQASTAFSLEGLFHAEDLYAAGTVIGSISVEAAMGSRAPFDH 243

Query:   306 LTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHEIDPLQKPKQDRYALRTSPQWLGPQ 365
               H ++   GQI+AA     +L  SS +  A   H +D  +K  QD Y+LR  PQ +G  
Sbjct:   244 RVHFVRGQKGQIDAARAYREVLTDSSEIAEA---H-VD-CEKV-QDPYSLRCQPQVMGAC 297

Query:   366 IEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLM 425
             +  IR A + +  E N V DNPL+  +    +  GNF   P+ ++ DN  LAIA IG L 
Sbjct:   298 LTQIRQAAEVLHVEANGVTDNPLVFANEGDFISAGNFHAEPVAMAADNLALAIAEIGSLS 357

Query:   426 FAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSA 485
               + + L++   +  LP  L    N  ++ GF  A++  A+  SE + LA+P +      
Sbjct:   358 ERRMALLIDSSLSK-LPPFLVD--NGGVNSGFMIAQVTSAALASENKSLAHPASVDSLPT 414

Query:   486 EQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRH------LEENLKHTVK 539
               + +D  S+   + R+ A+  +    + +   +A  Q +D R       L E  K  ++
Sbjct:   415 SANQEDHVSMACFAGRRLADMSENTNGVLAVEYLAAVQGLDFRAPLKGSPLIEKAKAKLR 474

Query:   540 NTVS 543
              TVS
Sbjct:   475 ETVS 478


>UNIPROTKB|Q1LRV9 [details] [associations]
            symbol:Rmet_0231 "Tyrosine ammonia-lyase" species:266264
            "Cupriavidus metallidurans CH34" [GO:0016841 "ammonia-lyase
            activity" evidence=IDA] [GO:0050368 "tyrosine 2,3-aminomutase
            activity" evidence=IDA] [GO:0004397 "histidine ammonia-lyase
            activity" evidence=IDA] InterPro:IPR001106 InterPro:IPR008948
            InterPro:IPR022313 Pfam:PF00221 PROSITE:PS00488 GO:GO:0009058
            Gene3D:1.10.275.10 InterPro:IPR024083 SUPFAM:SSF48557 GO:GO:0016841
            eggNOG:COG2986 KO:K01745 EMBL:CP000352 GenomeReviews:CP000352_GR
            RefSeq:YP_582386.1 ProteinModelPortal:Q1LRV9 SMR:Q1LRV9
            STRING:Q1LRV9 GeneID:4037017 KEGG:rme:Rmet_0231 PATRIC:20284990
            HOGENOM:HOG000237620 OMA:YLEAGIT ProtClustDB:CLSK953912
            BioCyc:CMET266264:GJ5G-236-MONOMER GO:GO:0050368 GO:GO:0052883
            InterPro:IPR022314 TIGRFAMs:TIGR03832 Uniprot:Q1LRV9
        Length = 533

 Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
 Identities = 155/500 (31%), Positives = 238/500 (47%)

Query:    63 NLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATS 122
             ++ G  LT   VAAIA       + E     V  +     +        YGV+TGFG   
Sbjct:     8 DIDGHHLTPDTVAAIARGQRAAIVPEPVLGKVADARARFEQVAAANVPIYGVSTGFGELV 67

Query:   123 HRRT--KNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRF 180
             H     ++G ALQ+ L+R   AG+   G   S        RA M+ R N L +GYS +R 
Sbjct:    68 HNWVDIEHGRALQENLLRSHCAGV---GPLFSR----DEVRAMMVARANALARGYSAVRP 120

Query:   181 EILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQE 240
              ++E + K L   ITP +P  G++ ASGDL PLS++A  L G    K    +G      E
Sbjct:   121 AVIEQLLKYLEAGITPAVPQVGSLGASGDLAPLSHVAITLIGE--GKVLTEDGGTAPTAE 178

Query:   241 ASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKP 300
               ++ G     L  KEGLAL+NGT+  +G++ ++L         +EI++A+  E +    
Sbjct:   179 VLRERGITPLALAYKEGLALINGTSAMTGVSCLLLETLRAQVQQAEIIAALALEGLSASA 238

Query:   301 E-FTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLH-EIDPLQ-KPK-------- 349
             + F  H     K HPGQI +AA M  +L  S+ ++   +L  E+     + K        
Sbjct:   239 DAFMAHGHDIAKPHPGQIRSAANMRALLADSARLSGHGELSAEMKTRAGEAKNTGTGVFI 298

Query:   350 QDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGV 409
             Q  Y LR  PQ LG   + +      +ERE+NS NDNPL      +  HGGNF G  +  
Sbjct:   299 QKAYTLRCIPQVLGAVRDTLDHCATVVERELNSSNDNPLF-FEDGELFHGGNFHGQQVAF 357

Query:   410 SMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCS 469
             +MD   +A   +G +   + + L++   NN LP+ L+   N  L  GF GA+    +  +
Sbjct:   358 AMDFLAIAATQLGVVSERRLNRLLSPHLNNNLPAFLAAA-NEGLSCGFAGAQYPATALIA 416

Query:   470 ELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRH 529
             E + + +P +     +   NQDV S+GLI++R     +D  + + +  L+A CQA +L  
Sbjct:   417 ENRTICSPASIQSVPSNGDNQDVVSMGLIAARNARRILDNNQYILALELLASCQAAELAG 476

Query:   530 LEENLKHTVKNTVSQVAKKV 549
               E L    +   + V ++V
Sbjct:   477 AVEQLAPAGRAVFAFVRERV 496


>TIGR_CMR|SO_0098 [details] [associations]
            symbol:SO_0098 "histidine ammonia-lyase" species:211586
            "Shewanella oneidensis MR-1" [GO:0004397 "histidine ammonia-lyase
            activity" evidence=ISS] [GO:0006548 "histidine catabolic process"
            evidence=ISS] HAMAP:MF_00229 InterPro:IPR001106 InterPro:IPR005921
            InterPro:IPR008948 InterPro:IPR022313 Pfam:PF00221 PROSITE:PS00488
            UniPathway:UPA00379 GO:GO:0005737 GO:GO:0009058 EMBL:AE014299
            GenomeReviews:AE014299_GR Gene3D:1.10.275.10 InterPro:IPR024083
            SUPFAM:SSF48557 GO:GO:0019556 GO:GO:0019557 eggNOG:COG2986
            GO:GO:0004397 HOGENOM:HOG000237619 KO:K01745 OMA:MPQIHGA
            ProtClustDB:PRK09367 TIGRFAMs:TIGR01225 RefSeq:NP_715740.1
            ProteinModelPortal:Q8EKJ4 SMR:Q8EKJ4 GeneID:1167996
            KEGG:son:SO_0098 PATRIC:23519895 Uniprot:Q8EKJ4
        Length = 513

 Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
 Identities = 134/462 (29%), Positives = 234/462 (50%)

Query:    68 TLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTK 127
             +L++AQ+  I+     +EL+  A   +  S+  V + +++G   YG+ TGFG  ++  TK
Sbjct:    13 SLSLAQLREISRHKLTLELAPEAINDINISAQIVQKVLDEGRTVYGINTGFGLLAN--TK 70

Query:   128 NGGALQKELIRFLNAGI-FGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAI 186
                 +  E ++ L   I   +   +   +  +  R  M++++N+L +G+SGIR E++  +
Sbjct:    71 ----IAPEDLQLLQRSIVLSHAAGTGQYMQDATVRLMMVLKINSLSRGFSGIRLEVINFL 126

Query:   187 TKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAG 246
               L+N  + PC+P +G++ ASGDL PL+++   L G          G+II A E  + AG
Sbjct:   127 ISLVNAEVYPCVPEKGSVGASGDLAPLAHMCLPLLGEGEMSY---QGQIISAAEGLEIAG 183

Query:   247 FGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHL 306
                 +L  KEGLAL+NGT   + LA   LF A +L   S ++ A+  E   G     D  
Sbjct:   184 LKPIDLAAKEGLALLNGTQASTALALEGLFHAEDLFAASSVIGAMSVEAAMGSRSPFDPR 243

Query:   307 THKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHEIDPLQKPKQDRYALRTSPQWLGPQI 366
              H  +   GQI++A +  ++L   S ++ +   H     +K  QD Y+LR  PQ LG  +
Sbjct:   244 IHAARGQKGQIDSAMVFRYLLGEESEISLS---HA--NCEKV-QDPYSLRCQPQVLGACL 297

Query:   367 EVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMF 426
               IR A + +  E N V DNPL+       + GGNF   P+ ++ DN  +AIA +G +  
Sbjct:   298 TQIRQAAEVLATEANGVTDNPLVFQDTGDIISGGNFHAEPVAMAADNLAIAIAELGAIAE 357

Query:   427 AQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAE 486
              + + L++   +  LP  L   +N  ++ GF  A++  A+  SE +  A+P +       
Sbjct:   358 RRIALLIDSSLSK-LPPFLV--KNGGVNSGFMIAQVTAAALASENKTYAHPASVDSLPTS 414

Query:   487 QHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLR 528
              + +D  S+   ++R+  +  +  + + +  L+A  Q +D R
Sbjct:   415 ANQEDHVSMATFAARRLRDMSENTRGVLAIELLAAAQGLDFR 456


>TIGR_CMR|BA_3712 [details] [associations]
            symbol:BA_3712 "histidine ammonia-lyase" species:198094
            "Bacillus anthracis str. Ames" [GO:0004397 "histidine ammonia-lyase
            activity" evidence=ISS] [GO:0006548 "histidine catabolic process"
            evidence=ISS] HAMAP:MF_00229 InterPro:IPR001106 InterPro:IPR005921
            InterPro:IPR008948 InterPro:IPR022313 Pfam:PF00221 PROSITE:PS00488
            UniPathway:UPA00379 GO:GO:0005737 GO:GO:0009058 EMBL:AE016879
            EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
            Gene3D:1.10.275.10 InterPro:IPR024083 SUPFAM:SSF48557 GO:GO:0019556
            GO:GO:0019557 eggNOG:COG2986 GO:GO:0004397 RefSeq:NP_845975.1
            RefSeq:YP_020345.1 RefSeq:YP_029698.1 ProteinModelPortal:Q81Y45
            DNASU:1086204 EnsemblBacteria:EBBACT00000008572
            EnsemblBacteria:EBBACT00000014424 EnsemblBacteria:EBBACT00000019436
            GeneID:1086204 GeneID:2819188 GeneID:2851389 KEGG:ban:BA_3712
            KEGG:bar:GBAA_3712 KEGG:bat:BAS3442 HOGENOM:HOG000237619 KO:K01745
            OMA:MPQIHGA ProtClustDB:PRK09367
            BioCyc:BANT260799:GJAJ-3504-MONOMER
            BioCyc:BANT261594:GJ7F-3617-MONOMER TIGRFAMs:TIGR01225
            Uniprot:Q81Y45
        Length = 505

 Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
 Identities = 140/493 (28%), Positives = 240/493 (48%)

Query:    61 VVNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGA 120
             ++ L G TLT+ ++  +      V    ++ + V    + V + +  G   YG+TTGFG 
Sbjct:     1 MITLTGHTLTIEEMKRLLLEGEGVTACPTSMQKVAECREVVEKIVENGKVVYGITTGFGK 60

Query:   121 TSHRRTKNGGALQKELIRFLNAGIF-GNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIR 179
              S         +QK+ ++ L   +   +        P   +R  +++R NT+L+G SG+R
Sbjct:    61 FSDV------LIQKDDVKALQHNLIQSHACGIGDPFPEEVSRGMLILRANTMLKGVSGVR 114

Query:   180 FEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQ 239
               ++  + + +N  I P +P +G++ ASGDL PLS++A +L G          G+ + A 
Sbjct:   115 PLVVNMLLEFVNRKIHPVVPQQGSLGASGDLAPLSHLALILLGEGE---VFYKGKRVHAM 171

Query:   240 EASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGK 299
              A  + G    EL+ KEGLAL+NGT   +    +   EA   A  +E+++++  E +QG 
Sbjct:   172 VALTEEGLEPIELEAKEGLALINGTQAMTAQGVLSYIEAEATAYQAELIASMTIEGLQGI 231

Query:   300 PEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHEIDPLQKPKQDRYALRTSP 359
              +  D   HK + +  Q+E A+ +  IL  S       +L          QD Y+LR  P
Sbjct:   232 IDAFDENVHKARGYKEQVEVASRIRDILHDSKLTTKQGELRV--------QDAYSLRCIP 283

Query:   360 QWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIA 419
             Q  G   +V+ +  + +E E+N+  DNPLI     K + GGNF G PI  +MD  ++ +A
Sbjct:   284 QVHGASWQVLNYVKEKLEIEMNAATDNPLIFDGGEKVISGGNFHGQPIAFAMDFLKVGMA 343

Query:   420 AIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVT 479
              +  +   +   LVN   N+ LP  LS    P L  G    + A AS  SE + LA+P +
Sbjct:   344 ELANISERRIERLVNPQLND-LPPFLSP--EPGLQSGAMIMQYAAASLVSENKTLAHPAS 400

Query:   480 NHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVK 539
                  +  + +D  S+G I+SR   + +  ++ + S  ++   QA + R +E N+    K
Sbjct:   401 VDSIPSSANQEDHVSMGTIASRHAHQIIQNVRRVLSIEMICAMQAAEYRGIE-NMSTVTK 459

Query:   540 NTVSQVAKKVLTV 552
             +   Q  ++V ++
Sbjct:   460 SFYHQGRQQVPSI 472


>UNIPROTKB|F1SQR7 [details] [associations]
            symbol:HAL "Histidine ammonia-lyase" species:9823 "Sus
            scrofa" [GO:0019557 "histidine catabolic process to glutamate and
            formate" evidence=IEA] [GO:0019556 "histidine catabolic process to
            glutamate and formamide" evidence=IEA] [GO:0004397 "histidine
            ammonia-lyase activity" evidence=IEA] [GO:0009058 "biosynthetic
            process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            InterPro:IPR001106 InterPro:IPR005921 InterPro:IPR008948
            InterPro:IPR022313 Pfam:PF00221 PROSITE:PS00488 UniPathway:UPA00379
            GO:GO:0005737 GO:GO:0009058 Gene3D:1.10.275.10 InterPro:IPR024083
            SUPFAM:SSF48557 GO:GO:0019556 GO:GO:0019557 GO:GO:0004397 KO:K01745
            TIGRFAMs:TIGR01225 GeneTree:ENSGT00390000009047 OMA:FLRPLKT
            EMBL:CU633406 RefSeq:XP_001925096.1 UniGene:Ssc.32439
            Ensembl:ENSSSCT00000000976 GeneID:100154617 KEGG:ssc:100154617
            Uniprot:F1SQR7
        Length = 657

 Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
 Identities = 150/495 (30%), Positives = 244/495 (49%)

Query:    45 SHLEEVKRMVAEYRKP--VVNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVM 102
             SH E V  + ++YR+P   + L G++LT   + ++      ++L+ +A + V+ S + + 
Sbjct:    96 SHPEGVY-LYSKYREPEKYIALDGDSLTTEDLVSLGKGHYKIKLTPTAEKKVQKSREVID 154

Query:   103 ESMNKGTDSYGVTTGFG--ATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSAT 160
               + + T  YG+TTGFG  A +         LQ  L+R  ++G+          +P    
Sbjct:   155 SIVKEKTVVYGITTGFGKFARTVIPVSKLEELQVNLVRSHSSGV------GKPLIPERC- 207

Query:   161 RAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLL 220
             R  + +R+N L +GYSGI  E L+ + ++ N +  P +P +GT+ ASGDL PLS++A  L
Sbjct:   208 RMLLALRINVLAKGYSGISLETLKQVIEVFNASCLPYVPEKGTVGASGDLAPLSHLALGL 267

Query:   221 TGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANN 280
              G    K   P     DA+      G     L+PKEGLAL+NGT + + L    +  A+ 
Sbjct:   268 IGE--GKMWSPKSGWADAKYVLAAHGLKPIVLKPKEGLALINGTQMITSLGCEAVERASA 325

Query:   281 LALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLH 340
             +A  ++I++A+  EV++G  +  D   H ++ H GQ+E A     +LD   + +   + H
Sbjct:   326 IARQADIVAALTLEVLKGTTKAFDTDIHAVRPHRGQVEVAFRFRSLLDSDHHPSEIAESH 385

Query:   341 EI-DPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHG 399
                D +Q    D Y LR  PQ  G   + I F    I  EINS  DNP++  SR + + G
Sbjct:   386 RFCDRVQ----DAYTLRCCPQVHGVANDTIAFVKHIITTEINSATDNPMVFASRGETISG 441

Query:   400 GNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNL--SGGRNPSLDYGF 457
             GNF G     ++D   + I  +  +   +   L N   +  LP+ L   GG N     GF
Sbjct:   442 GNFHGEYPAKALDYLAIGIHELAAISERRIERLCNPSLSE-LPAFLVAEGGLNS----GF 496

Query:   458 KGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTF 517
               A    A+  SE + L +P +    S     +D  S+G  ++RK    V+ ++ + +  
Sbjct:   497 MIAHCTAAALVSENKALCHPSSVDSLSTSAATEDHVSMGGWAARKALRVVEHVEQVLAIE 556

Query:   518 LVALCQAID-LRHLE 531
             L+A CQ I+ LR L+
Sbjct:   557 LLAACQGIEFLRPLK 571


>UNIPROTKB|F1NZQ9 [details] [associations]
            symbol:HAL "Histidine ammonia-lyase" species:9031 "Gallus
            gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009058
            "biosynthetic process" evidence=IEA] [GO:0004397 "histidine
            ammonia-lyase activity" evidence=IEA] [GO:0019556 "histidine
            catabolic process to glutamate and formamide" evidence=IEA]
            [GO:0019557 "histidine catabolic process to glutamate and formate"
            evidence=IEA] InterPro:IPR001106 InterPro:IPR005921
            InterPro:IPR008948 InterPro:IPR022313 Pfam:PF00221 PROSITE:PS00488
            UniPathway:UPA00379 GO:GO:0005737 GO:GO:0009058 Gene3D:1.10.275.10
            InterPro:IPR024083 SUPFAM:SSF48557 GO:GO:0019556 GO:GO:0019557
            GO:GO:0004397 TIGRFAMs:TIGR01225 GeneTree:ENSGT00390000009047
            EMBL:AADN02005954 IPI:IPI00818683 Ensembl:ENSGALT00000038284
            Uniprot:F1NZQ9
        Length = 648

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 149/502 (29%), Positives = 241/502 (48%)

Query:    37 VMAETLKGSHLEEVKRMVAEYRKP--VVNLGGETLTVAQVAAIATSSTNVELSESAREGV 94
             +M+     S  E V  + ++YR+P   ++L G +LT   +  +      ++L+  A   V
Sbjct:    77 IMSPDFIPSQPEGV-HLYSKYREPEQYISLDGNSLTTQDLVNLGKGLYKIKLTPEAEAKV 135

Query:    95 KASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGA--LQKELIRFLNAGIFGNGTESS 152
             K S + +   + + T  YG+TTGFG  +     N     LQ  L+R  +AG+        
Sbjct:   136 KQSREVIERIVKEQTVVYGITTGFGKFARTVIPNSKLMELQMNLVRSHSAGV-------G 188

Query:   153 HTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVP 212
               L    +R  + +R+N L +GYSGI  E L+ + +  N +  P +P +GT+ ASGDL P
Sbjct:   189 KPLTPERSRMLLALRINVLAKGYSGISLETLQQVIEAFNASCLPYIPEKGTVGASGDLAP 248

Query:   213 LSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLAS 272
             LS++A  LTG    K   P     DA+   +  G     L+PKEGLAL+NGT + + L  
Sbjct:   249 LSHLALGLTGE--GKMWSPKSGWADAKYVLEAHGLKPITLKPKEGLALINGTQMITSLGC 306

Query:   273 MVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSY 332
               +  A+ +A  ++I++A+  EV++G  +  D   H ++ H GQ E A     +LD   +
Sbjct:   307 EAVERASAIARQADIVAALTLEVLKGTTKAFDTDIHAVRPHRGQAEVAFRFRSLLDSDHH 366

Query:   333 VNAAKKLHEI-DPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDV 391
              +   + H   D +Q    D Y +R  PQ  G   + I F    +  EINS  DNP++  
Sbjct:   367 PSEIAESHRFCDRVQ----DAYTMRCCPQVHGVVNDTIAFVKDIMTTEINSATDNPMVFA 422

Query:   392 SRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNL--SGGR 449
              R + + GGNF G     ++D   + +  +  +   +   L N   +  LP+ L   GG 
Sbjct:   423 ERAETISGGNFHGEYPAKALDYLAIGVHELAAISERRIERLCNPSLSE-LPAFLVTEGGL 481

Query:   450 NPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDI 509
             N     GF  A    A+  SE + L +P +    S     +D  S+G  S+RK    ++ 
Sbjct:   482 NS----GFMIAHCTAAALVSENKALCHPSSVDSLSTSAATEDHVSMGGWSARKALRVIEH 537

Query:   510 LKLMSSTFLVALCQAID-LRHL 530
             ++ + +  L+A CQ I+ LR L
Sbjct:   538 VEQVLAIELLAACQGIEFLRPL 559


>UNIPROTKB|F1P294 [details] [associations]
            symbol:HAL "Histidine ammonia-lyase" species:9031 "Gallus
            gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009058
            "biosynthetic process" evidence=IEA] [GO:0004397 "histidine
            ammonia-lyase activity" evidence=IEA] [GO:0019556 "histidine
            catabolic process to glutamate and formamide" evidence=IEA]
            [GO:0019557 "histidine catabolic process to glutamate and formate"
            evidence=IEA] InterPro:IPR001106 InterPro:IPR005921
            InterPro:IPR008948 InterPro:IPR022313 Pfam:PF00221 PROSITE:PS00488
            UniPathway:UPA00379 GO:GO:0005737 GO:GO:0009058 Gene3D:1.10.275.10
            InterPro:IPR024083 SUPFAM:SSF48557 GO:GO:0019556 GO:GO:0019557
            GO:GO:0004397 TIGRFAMs:TIGR01225 GeneTree:ENSGT00390000009047
            OMA:FLRPLKT EMBL:AADN02005954 IPI:IPI00570697
            Ensembl:ENSGALT00000018631 Uniprot:F1P294
        Length = 662

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 149/502 (29%), Positives = 241/502 (48%)

Query:    37 VMAETLKGSHLEEVKRMVAEYRKP--VVNLGGETLTVAQVAAIATSSTNVELSESAREGV 94
             +M+     S  E V  + ++YR+P   ++L G +LT   +  +      ++L+  A   V
Sbjct:    88 IMSPDFIPSQPEGV-HLYSKYREPEQYISLDGNSLTTQDLVNLGKGLYKIKLTPEAEAKV 146

Query:    95 KASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGA--LQKELIRFLNAGIFGNGTESS 152
             K S + +   + + T  YG+TTGFG  +     N     LQ  L+R  +AG+        
Sbjct:   147 KQSREVIERIVKEQTVVYGITTGFGKFARTVIPNSKLMELQMNLVRSHSAGV-------G 199

Query:   153 HTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVP 212
               L    +R  + +R+N L +GYSGI  E L+ + +  N +  P +P +GT+ ASGDL P
Sbjct:   200 KPLTPERSRMLLALRINVLAKGYSGISLETLQQVIEAFNASCLPYIPEKGTVGASGDLAP 259

Query:   213 LSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLAS 272
             LS++A  LTG    K   P     DA+   +  G     L+PKEGLAL+NGT + + L  
Sbjct:   260 LSHLALGLTGE--GKMWSPKSGWADAKYVLEAHGLKPITLKPKEGLALINGTQMITSLGC 317

Query:   273 MVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSY 332
               +  A+ +A  ++I++A+  EV++G  +  D   H ++ H GQ E A     +LD   +
Sbjct:   318 EAVERASAIARQADIVAALTLEVLKGTTKAFDTDIHAVRPHRGQAEVAFRFRSLLDSDHH 377

Query:   333 VNAAKKLHEI-DPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDV 391
              +   + H   D +Q    D Y +R  PQ  G   + I F    +  EINS  DNP++  
Sbjct:   378 PSEIAESHRFCDRVQ----DAYTMRCCPQVHGVVNDTIAFVKDIMTTEINSATDNPMVFA 433

Query:   392 SRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNL--SGGR 449
              R + + GGNF G     ++D   + +  +  +   +   L N   +  LP+ L   GG 
Sbjct:   434 ERAETISGGNFHGEYPAKALDYLAIGVHELAAISERRIERLCNPSLSE-LPAFLVTEGGL 492

Query:   450 NPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDI 509
             N     GF  A    A+  SE + L +P +    S     +D  S+G  S+RK    ++ 
Sbjct:   493 NS----GFMIAHCTAAALVSENKALCHPSSVDSLSTSAATEDHVSMGGWSARKALRVIEH 548

Query:   510 LKLMSSTFLVALCQAID-LRHL 530
             ++ + +  L+A CQ I+ LR L
Sbjct:   549 VEQVLAIELLAACQGIEFLRPL 570


>UNIPROTKB|Q0VZ68 [details] [associations]
            symbol:cmdF "Tyrosine 2,3-aminomutase" species:52
            "Chondromyces crocatus" [GO:0009403 "toxin biosynthetic process"
            evidence=IDA] [GO:0016841 "ammonia-lyase activity" evidence=IDA]
            [GO:0050368 "tyrosine 2,3-aminomutase activity" evidence=IDA]
            [GO:0004397 "histidine ammonia-lyase activity" evidence=IDA]
            InterPro:IPR001106 InterPro:IPR008948 InterPro:IPR022313
            Pfam:PF00221 PROSITE:PS00488 Gene3D:1.10.275.10 InterPro:IPR024083
            SUPFAM:SSF48557 GO:GO:0009403 EMBL:AM179409 GO:GO:0016841
            GO:GO:0050368 GO:GO:0052883 InterPro:IPR022314 TIGRFAMs:TIGR03832
            ProteinModelPortal:Q0VZ68 Uniprot:Q0VZ68
        Length = 531

 Score = 502 (181.8 bits), Expect = 5.2e-48, P = 5.2e-48
 Identities = 154/479 (32%), Positives = 226/479 (47%)

Query:    62 VNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFG-- 119
             + + G  L++  VA +      VEL  S  E V  + +            YGV TGFG  
Sbjct:     1 MKITGSNLSIYDVADVCMKRATVELDPSQLERVAVAHERTQAWGEAQHPIYGVNTGFGEL 60

Query:   120 --ATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSG 177
                   R+ K    LQ+ LIR   AG    G E          RA ML R+N L++GYSG
Sbjct:    61 VPVMIPRQHKR--ELQENLIRSHAAG----GGEP---FADDVVRAIMLARLNCLMKGYSG 111

Query:   178 IRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIID 237
                E ++ + + +N  I P +P +G++ ASGDL PLS+IA  L G          G++  
Sbjct:   112 ASVETVKLLAEFINRGIHPVIPQQGSLGASGDLSPLSHIALALIGEGTVSF---KGQVRK 168

Query:   238 AQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQ 297
               +  ++ G    EL  K GL L+NGT+  +G A + L  A +L  L+ + +A F + + 
Sbjct:   169 TGDVLREEGLKPLELGFKGGLTLINGTSAMTGAACVALGRAYHLFRLALLATADFVQCLG 228

Query:   298 GKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKL-----------HEIDPLQ 346
             G     +   H  K+H GQ+  A  +  +L GS   +  + L           +++    
Sbjct:   229 GSTGPFEERGHLPKNHSGQVIVAREIRKLLAGSQLTSDHQDLMKEMVARSGVGNDVVDTG 288

Query:   347 KPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLI-DVSRNKALHGGNFQGT 405
                QD Y LR  PQ LGP ++ + FA K IE E+NS NDNPLI DV   +  HG NF G 
Sbjct:   289 VYLQDAYTLRAVPQILGPVLDTLDFARKLIEEELNSTNDNPLIFDVPE-QTFHGANFHGQ 347

Query:   406 PIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMA 465
              + ++ D   +A+  IG L   Q + LV+   N  LP  L+   +  L  GF+G +    
Sbjct:   348 YVAMACDYLNIAVTEIGVLAERQLNRLVDPNINGKLPPFLASAHSGLL-CGFEGGQYLAT 406

Query:   466 SYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQA 524
             S  SE   LA P +     +   NQDV S+G  S+RK+    + +  + ST + A  QA
Sbjct:   407 SIASENLDLAAPSSIKSLPSNGSNQDVVSMGTTSARKSLRLCENVGTIVSTLIAACNQA 465


>UNIPROTKB|P42357 [details] [associations]
            symbol:HAL "Histidine ammonia-lyase" species:9606 "Homo
            sapiens" [GO:0009058 "biosynthetic process" evidence=IEA]
            [GO:0004397 "histidine ammonia-lyase activity" evidence=IEA]
            [GO:0019556 "histidine catabolic process to glutamate and
            formamide" evidence=IEA] [GO:0019557 "histidine catabolic process
            to glutamate and formate" evidence=IEA] [GO:0005829 "cytosol"
            evidence=TAS] [GO:0006548 "histidine catabolic process"
            evidence=TAS] [GO:0034641 "cellular nitrogen compound metabolic
            process" evidence=TAS] [GO:0044281 "small molecule metabolic
            process" evidence=TAS] Reactome:REACT_111217 InterPro:IPR001106
            InterPro:IPR005921 InterPro:IPR008948 InterPro:IPR022313
            Pfam:PF00221 PROSITE:PS00488 UniPathway:UPA00379 GO:GO:0005829
            GO:GO:0009058 EMBL:CH471054 Gene3D:1.10.275.10 InterPro:IPR024083
            SUPFAM:SSF48557 GO:GO:0006548 DrugBank:DB00117 GO:GO:0019556
            GO:GO:0019557 eggNOG:COG2986 GO:GO:0004397 HOGENOM:HOG000237619
            KO:K01745 TIGRFAMs:TIGR01225 CTD:3034 HOVERGEN:HBG004509
            OMA:FLRPLKT OrthoDB:EOG4MW85M EMBL:D16626 EMBL:AB042217
            EMBL:AK298736 EMBL:AK303544 EMBL:AC007298 EMBL:AC126174
            EMBL:BC096097 EMBL:BC096098 EMBL:BC096099 IPI:IPI00031425
            IPI:IPI01012806 IPI:IPI01015439 PIR:S43415 RefSeq:NP_001245262.1
            RefSeq:NP_001245263.1 RefSeq:NP_002099.1 UniGene:Hs.190783
            UniGene:Hs.742210 ProteinModelPortal:P42357 SMR:P42357
            STRING:P42357 PhosphoSite:P42357 DMDM:1170423 PaxDb:P42357
            PRIDE:P42357 Ensembl:ENST00000261208 Ensembl:ENST00000538703
            Ensembl:ENST00000541929 GeneID:3034 KEGG:hsa:3034 UCSC:uc001tem.1
            GeneCards:GC12M096366 HGNC:HGNC:4806 HPA:HPA038547 HPA:HPA038548
            MIM:235800 MIM:609457 neXtProt:NX_P42357 Orphanet:2157
            PharmGKB:PA29181 InParanoid:P42357 BioCyc:MetaCyc:HS01466-MONOMER
            ChEMBL:CHEMBL4003 GenomeRNAi:3034 NextBio:12010 ArrayExpress:P42357
            Bgee:P42357 CleanEx:HS_HAL Genevestigator:P42357
            GermOnline:ENSG00000084110 Uniprot:P42357
        Length = 657

 Score = 498 (180.4 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 154/524 (29%), Positives = 253/524 (48%)

Query:    16 LEGLCKNNNYN--YSSGDALNWGVMAETLKGSHLEEVKRMVAEYRKP--VVNLGGETLTV 71
             LE   +NN +      GDA++   +    +G +L       ++YR+P   + L G+ LT 
Sbjct:    70 LEVALENNEFVEVVIEGDAMSPDFIPSQPEGVYL------YSKYREPEKYIELDGDRLTT 123

Query:    72 AQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGA 131
               +  +      ++L+ +A + V+ S + +   + + T  YG+TTGFG  + R       
Sbjct:   124 EDLVNLGKGRYKIKLTPTAEKRVQKSREVIDSIIKEKTVVYGITTGFGKFA-RTVIPINK 182

Query:   132 LQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLN 191
             LQ+  +  + +   G G   S   P    R  + +R+N L +GYSGI  E L+ + ++ N
Sbjct:   183 LQELQVNLVRSHSSGVGKPLS---PERC-RMLLALRINVLAKGYSGISLETLKQVIEMFN 238

Query:   192 HNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFE 251
              +  P +P +GT+ ASGDL PLS++A  L G    K   P     DA+   +  G     
Sbjct:   239 ASCLPYVPEKGTVGASGDLAPLSHLALGLVGE--GKMWSPKSGWADAKYVLEAHGLKPVI 296

Query:   252 LQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLK 311
             L+PKEGLAL+NGT + + L    +  A+ +A  ++I++A+  EV++G  +  D   H L+
Sbjct:   297 LKPKEGLALINGTQMITSLGCEAVERASAIARQADIVAALTLEVLKGTTKAFDTDIHALR 356

Query:   312 HHPGQIEAAAIMEHILDGSSYVNAAKKLHEI-DPLQKPKQDRYALRTSPQWLGPQIEVIR 370
              H GQIE A     +LD   + +   + H   D +Q    D Y LR  PQ  G   + I 
Sbjct:   357 PHRGQIEVAFRFRSLLDSDHHPSEIAESHRFCDRVQ----DAYTLRCCPQVHGVVNDTIA 412

Query:   371 FATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFS 430
             F    I  E+NS  DNP++  +R + + GGNF G     ++D   + I  +  +   +  
Sbjct:   413 FVKNIITTELNSATDNPMVFANRGETVSGGNFHGEYPAKALDYLAIGIHELAAISERRIE 472

Query:   431 ELVNDFYNNGLPSNL--SGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQH 488
              L N   +  LP+ L   GG N     GF  A    A+  SE + L +P +    S    
Sbjct:   473 RLCNPSLSE-LPAFLVAEGGLNS----GFMIAHCTAAALVSENKALCHPSSVDSLSTSAA 527

Query:   489 NQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAID-LRHLE 531
              +D  S+G  ++RK    ++ ++ + +  L+A CQ I+ LR L+
Sbjct:   528 TEDHVSMGGWAARKALRVIEHVEQVLAIELLAACQGIEFLRPLK 571


>UNIPROTKB|E2QW26 [details] [associations]
            symbol:HAL "Histidine ammonia-lyase" species:9615 "Canis
            lupus familiaris" [GO:0019557 "histidine catabolic process to
            glutamate and formate" evidence=IEA] [GO:0019556 "histidine
            catabolic process to glutamate and formamide" evidence=IEA]
            [GO:0004397 "histidine ammonia-lyase activity" evidence=IEA]
            [GO:0009058 "biosynthetic process" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] InterPro:IPR001106 InterPro:IPR005921
            InterPro:IPR008948 InterPro:IPR022313 Pfam:PF00221 PROSITE:PS00488
            UniPathway:UPA00379 GO:GO:0005737 GO:GO:0009058 Gene3D:1.10.275.10
            InterPro:IPR024083 SUPFAM:SSF48557 GO:GO:0019556 GO:GO:0019557
            GO:GO:0004397 KO:K01745 TIGRFAMs:TIGR01225 CTD:3034
            GeneTree:ENSGT00390000009047 OMA:FLRPLKT EMBL:AAEX03009956
            EMBL:AAEX03009954 EMBL:AAEX03009955 RefSeq:XP_532657.2
            Ensembl:ENSCAFT00000010385 GeneID:475433 KEGG:cfa:475433
            Uniprot:E2QW26
        Length = 657

 Score = 497 (180.0 bits), Expect = 2.1e-47, P = 2.1e-47
 Identities = 149/487 (30%), Positives = 242/487 (49%)

Query:    53 MVAEYRKP--VVNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKG-T 109
             + ++YR+P   + L G++LT   +  +      ++L+ +A + V+ S + V+ES+ K  T
Sbjct:   103 LYSKYREPEKYIALDGDSLTTEDLVNLGKGHYKIKLTPTAEKKVQKSRE-VIESIVKEKT 161

Query:   110 DSYGVTTGFG--ATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVR 167
               YG+TTGFG  A +         LQ  L+R  ++G+          +P    R  + +R
Sbjct:   162 VVYGITTGFGKFARTVIPVNKLEELQVNLVRSHSSGV------GKPLIPERC-RMLLALR 214

Query:   168 VNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSK 227
             +N L +GYSGI  E L+ + ++ N +  P +P +GT+ ASGDL PLS++A  L G    K
Sbjct:   215 INVLAKGYSGISLETLKRVIEVFNASCLPYVPEKGTVGASGDLAPLSHLALGLIGE--GK 272

Query:   228 ATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEI 287
                P     DA+   +  G     L+PKEGLAL+NGT + + L    +  A+ +A  ++I
Sbjct:   273 MWSPKSGWADAKYVLEAHGLKPVVLKPKEGLALINGTQMITSLGCEAVERASAIARQADI 332

Query:   288 LSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHEI-DPLQ 346
             ++A+  EV++G  +  D   H ++ H GQIE A     +LD   + +   + H   D +Q
Sbjct:   333 VAALTLEVLKGTTKAFDTDIHAVRPHRGQIEVAFRFRSLLDSDHHPSEIAESHRFCDRVQ 392

Query:   347 KPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTP 406
                 D Y LR  PQ  G   + I F    I  E+NS  DNP++  SR + + GGNF G  
Sbjct:   393 ----DAYTLRCCPQVHGVVNDTIAFVKNIITTELNSATDNPMVFASRGETISGGNFHGEY 448

Query:   407 IGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNL--SGGRNPSLDYGFKGAEIAM 464
                ++D   + I  +  +   +   L N   +  LP+ L   GG N     GF  A    
Sbjct:   449 PAKALDYLAIGIHELAAISERRIERLCNPSLSE-LPAFLVAEGGLNS----GFMIAHCTA 503

Query:   465 ASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQA 524
             A+  SE + L +P +    S     +D  S+G  ++RK    ++ ++ + +  L+A CQ 
Sbjct:   504 AALVSENKALCHPSSVDSLSTSAATEDHVSMGGWAARKALRVIEHVEQVLAIELLAACQG 563

Query:   525 ID-LRHL 530
             I+ LR L
Sbjct:   564 IEFLRPL 570


>UNIPROTKB|A7YWP4 [details] [associations]
            symbol:HAL "Histidine ammonia-lyase" species:9913 "Bos
            taurus" [GO:0019557 "histidine catabolic process to glutamate and
            formate" evidence=IEA] [GO:0019556 "histidine catabolic process to
            glutamate and formamide" evidence=IEA] [GO:0004397 "histidine
            ammonia-lyase activity" evidence=IEA] [GO:0009058 "biosynthetic
            process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            InterPro:IPR001106 InterPro:IPR005921 InterPro:IPR008948
            InterPro:IPR022313 Pfam:PF00221 PROSITE:PS00488 UniPathway:UPA00379
            GO:GO:0005737 GO:GO:0009058 Gene3D:1.10.275.10 InterPro:IPR024083
            SUPFAM:SSF48557 GO:GO:0019556 GO:GO:0019557 eggNOG:COG2986
            GO:GO:0004397 HOGENOM:HOG000237619 KO:K01745 TIGRFAMs:TIGR01225
            EMBL:BC134685 IPI:IPI00691038 RefSeq:NP_001098910.1 UniGene:Bt.968
            ProteinModelPortal:A7YWP4 STRING:A7YWP4 PRIDE:A7YWP4
            Ensembl:ENSBTAT00000021649 GeneID:615205 KEGG:bta:615205 CTD:3034
            GeneTree:ENSGT00390000009047 HOVERGEN:HBG004509 InParanoid:A7YWP4
            OMA:FLRPLKT OrthoDB:EOG4MW85M NextBio:20899504 Uniprot:A7YWP4
        Length = 657

 Score = 492 (178.3 bits), Expect = 8.2e-47, P = 8.2e-47
 Identities = 147/489 (30%), Positives = 241/489 (49%)

Query:    53 MVAEYRKP--VVNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTD 110
             + ++YR+P   + L G++LT   + ++      ++L+ +A + V+ S + +   + + T 
Sbjct:   103 LYSKYREPEKYIALDGDSLTTEDLVSLGKGHYKIKLTPTAEKRVQKSREVIDRIVEEKTV 162

Query:   111 SYGVTTGFG--ATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLV-- 166
              YG+TTGFG  A +         LQ  L+R  ++G+ G         P S  R  ML+  
Sbjct:   163 VYGITTGFGKFARTVIPVSKLEELQFNLVRSHSSGV-GK--------PLSPERCRMLLAL 213

Query:   167 RVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNS 226
             R+N L +GYSGI    L+ + ++ N +  P +P +GT+ ASGDL PLS++A  L G    
Sbjct:   214 RINVLAKGYSGISLGTLKQVIEVFNASCLPYVPEKGTVGASGDLAPLSHLALGLIGE--G 271

Query:   227 KATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSE 286
             K   P     DA+      G     L+PKEGLAL+NGT + + L    +  A+ +A  ++
Sbjct:   272 KMWSPKSGWADAKYVLAAHGLKPIVLKPKEGLALINGTQMITSLGCEAVERASAIARQAD 331

Query:   287 ILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHEI-DPL 345
             I++A+  EV++G  +  D   H ++ H GQ+E A     +LD   + +   + H   D +
Sbjct:   332 IVAALTLEVLKGTTKAFDTDIHAVRPHRGQVEVAFRFRSLLDSDHHPSEIAESHRFCDRV 391

Query:   346 QKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGT 405
             Q    D Y LR  PQ  G   + I F    I  EINS  DNP++  SR + + GGNF G 
Sbjct:   392 Q----DAYTLRCCPQVHGVVNDTIAFVKNIITTEINSATDNPMVFASRGETISGGNFHGE 447

Query:   406 PIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNL--SGGRNPSLDYGFKGAEIA 463
                 ++D   + +  +  +   +   L N   +  LP+ L   GG N     GF  A   
Sbjct:   448 YPAKALDYLAIGVHELASISERRIERLCNPSLSE-LPAFLVAEGGLNS----GFMIAHCT 502

Query:   464 MASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQ 523
              A+  SE + L +P +    S     +D  S+G  ++RK    ++ ++ + +  L+A CQ
Sbjct:   503 AAALVSENKALCHPSSVDSLSTSAATEDHVSMGGWAARKALRVIEHVEQVLAIELLAACQ 562

Query:   524 AID-LRHLE 531
              I+ LR L+
Sbjct:   563 GIEFLRPLK 571


>ZFIN|ZDB-GENE-070410-5 [details] [associations]
            symbol:hal "histidine ammonia-lyase" species:7955
            "Danio rerio" [GO:0016841 "ammonia-lyase activity" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003824 "catalytic
            activity" evidence=IEA] [GO:0006548 "histidine catabolic process"
            evidence=IEA] [GO:0004397 "histidine ammonia-lyase activity"
            evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
            [GO:0016829 "lyase activity" evidence=IEA] [GO:0006547 "histidine
            metabolic process" evidence=IEA] InterPro:IPR001106
            InterPro:IPR005921 InterPro:IPR008948 InterPro:IPR022313
            Pfam:PF00221 PROSITE:PS00488 UniPathway:UPA00379
            ZFIN:ZDB-GENE-070410-5 GO:GO:0005737 GO:GO:0009058
            Gene3D:1.10.275.10 InterPro:IPR024083 SUPFAM:SSF48557 GO:GO:0019556
            GO:GO:0019557 eggNOG:COG2986 GO:GO:0004397 HOGENOM:HOG000237619
            KO:K01745 TIGRFAMs:TIGR01225 CTD:3034 GeneTree:ENSGT00390000009047
            HOVERGEN:HBG004509 OrthoDB:EOG4MW85M InterPro:IPR021922
            Pfam:PF12053 EMBL:CU914483 EMBL:FP016019 EMBL:BC115354
            IPI:IPI00844973 RefSeq:NP_001082926.1 UniGene:Dr.51858
            STRING:A4FUP1 Ensembl:ENSDART00000025928 GeneID:100004331
            KEGG:dre:100004331 InParanoid:A4FUP1 NextBio:20786202
            Uniprot:A4FUP1
        Length = 654

 Score = 489 (177.2 bits), Expect = 1.8e-46, P = 1.8e-46
 Identities = 146/482 (30%), Positives = 235/482 (48%)

Query:    57 YRKPV--VNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGV 114
             YR+P   + L G +LT   +  +      ++L+  A + V  S + +   + +    YG+
Sbjct:   107 YREPEQHITLDGNSLTSTDLVNLGKGLYKIKLTPEAEQKVVESRELLDTIVKENKVVYGI 166

Query:   115 TTGFG--ATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLL 172
             TTGFG  A +         LQ+ L+R  ++G+   G+  S   P   TR  + +R+N L 
Sbjct:   167 TTGFGKFARTVIPVSKLKELQENLLRSHSSGL---GSPLS---PER-TRMLLALRINVLA 219

Query:   173 QGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPN 232
             +G+SG+  E L ++ +  N +    +P +GT+ ASGDL PLS++A  L G    K   P 
Sbjct:   220 KGHSGVSPETLHSMIQAFNASCLSYVPEKGTVGASGDLAPLSHLALGLMGE--GKMWSPK 277

Query:   233 GEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIF 292
                 DA+   +  G     L+PKEGLAL+NGT + + L +  +  A  +A  ++I++A+ 
Sbjct:   278 SGWADAKYVLEAHGLKPISLKPKEGLALINGTQMITSLGAEAVERAEAIARQADIIAALT 337

Query:   293 AEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHEI-DPLQKPKQD 351
              EV++G  +  D   HKL+ HPGQ E A     +LD   + +   + H   D +Q    D
Sbjct:   338 LEVLKGTTKAFDSDIHKLRPHPGQNEVAMRFRSLLDSDHHPSEIAESHRFCDRVQ----D 393

Query:   352 RYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSM 411
              Y +R  PQ  G   + I F  K I  EINS  DNP++   R + + GGNF G     ++
Sbjct:   394 AYTMRCCPQVHGIVNDTIEFVKKIINTEINSATDNPMVFAERGETISGGNFHGEYPAKAL 453

Query:   412 DNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNL--SGGRNPSLDYGFKGAEIAMASYCS 469
             D   + +  +  +   +   L N   +  LP+ L   GG N     GF  A    A+  S
Sbjct:   454 DYLAIGVHELASISERRIERLCNPSLSE-LPAFLVNEGGLNS----GFMIAHCTAAALVS 508

Query:   470 ELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAID-LR 528
             E + L +P +    S     +D  S+G  ++RK    V+ ++ + +  L+A CQ I+ LR
Sbjct:   509 ENKVLCHPSSIDSLSTSAATEDHVSMGGWAARKALRVVEHVEQVLAIELLAACQGIEFLR 568

Query:   529 HL 530
              L
Sbjct:   569 PL 570


>TIGR_CMR|SPO_2192 [details] [associations]
            symbol:SPO_2192 "histidine ammonia-lyase" species:246200
            "Ruegeria pomeroyi DSS-3" [GO:0004397 "histidine ammonia-lyase
            activity" evidence=ISS] [GO:0006548 "histidine catabolic process"
            evidence=ISS] HAMAP:MF_00229 InterPro:IPR001106 InterPro:IPR005921
            InterPro:IPR008948 InterPro:IPR022313 Pfam:PF00221 PROSITE:PS00488
            UniPathway:UPA00379 GO:GO:0005737 GO:GO:0009058 EMBL:CP000031
            GenomeReviews:CP000031_GR Gene3D:1.10.275.10 InterPro:IPR024083
            SUPFAM:SSF48557 GO:GO:0019556 GO:GO:0019557 eggNOG:COG2986
            GO:GO:0004397 HOGENOM:HOG000237619 KO:K01745 ProtClustDB:PRK09367
            TIGRFAMs:TIGR01225 OMA:NAPVYGI RefSeq:YP_167417.1
            ProteinModelPortal:Q5LRD8 SMR:Q5LRD8 GeneID:3192758
            KEGG:sil:SPO2192 PATRIC:23377733 Uniprot:Q5LRD8
        Length = 512

 Score = 488 (176.8 bits), Expect = 2.4e-46, P = 2.4e-46
 Identities = 133/461 (28%), Positives = 227/461 (49%)

Query:    70 TVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRT--K 127
             T+  +A I    + V L  + R  V+A++  +  +       YGV TGFG  +  +   +
Sbjct:    12 TLEHLARIYFDESPVRLDPACRPAVEAAAARIRAAAAGDVPVYGVNTGFGKLASLKVAPQ 71

Query:   128 NGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAIT 187
             +   LQ+ LI     G+   G      +P    R  M++++ +L +G SG+R+E++  + 
Sbjct:    72 DTATLQRNLILSHCCGV---GAP----IPRRMARLMMVLKLLSLGRGASGVRWELITLLQ 124

Query:   188 KLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGF 247
             ++L  ++TP +P++G++ ASGDL PL+++  ++ G   ++     G+ +   EA  +AG 
Sbjct:   125 EMLARDVTPVIPVQGSVGASGDLAPLAHMTAVIIGAGEAEY---QGQRLPGAEALARAGL 181

Query:   248 GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLT 307
                 L PKEGLA +NGT   +  A   LF A   A  S + +A+  + + G         
Sbjct:   182 TPIALGPKEGLAFINGTQFSTAFALAGLFGAWRAATSSLVTAALSTDAIMGSTAPLQPEI 241

Query:   308 HKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIE 367
             H L+ H GQI+AAA M  +LDGS      ++ H     +   QD Y +R  PQ  G  ++
Sbjct:   242 HALRGHRGQIDAAARMRALLDGSEI----RESHREGDTRV--QDPYCIRCQPQVTGAAMD 295

Query:   368 VIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFA 427
             V+R A +++E E N+  DNPL+    +  + GGNF   P+G + D   LA++ IG +   
Sbjct:   296 VLRQAAQTLEIEANAATDNPLVLAEADMIVSGGNFHAEPVGFAADLIALALSEIGAIAQR 355

Query:   428 QFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQ 487
             + + +V+   +  LP  L+    P L+ G   AE+  A+  SE + LANP          
Sbjct:   356 RVALMVDPTLSFDLPPFLTP--KPGLNSGLMIAEVTTAALMSENKHLANPCVTDSTPTSA 413

Query:   488 HNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLR 528
             + +D  S+    + +    V+ L  +    L+   Q I+ R
Sbjct:   414 NQEDHVSMAAHGAVRLGRMVENLHYILGVELLCAAQGIEFR 454


>MGI|MGI:96010 [details] [associations]
            symbol:Hal "histidine ammonia lyase" species:10090 "Mus
            musculus" [GO:0003824 "catalytic activity" evidence=IEA]
            [GO:0004397 "histidine ammonia-lyase activity" evidence=ISO;IDA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006547 "histidine
            metabolic process" evidence=IEA] [GO:0006548 "histidine catabolic
            process" evidence=IDA] [GO:0009058 "biosynthetic process"
            evidence=IEA] [GO:0016829 "lyase activity" evidence=IEA]
            [GO:0016841 "ammonia-lyase activity" evidence=IEA]
            InterPro:IPR001106 InterPro:IPR005921 InterPro:IPR008948
            InterPro:IPR022313 Pfam:PF00221 PROSITE:PS00488 UniPathway:UPA00379
            MGI:MGI:96010 GO:GO:0005737 GO:GO:0009058 Gene3D:1.10.275.10
            InterPro:IPR024083 SUPFAM:SSF48557 GO:GO:0006548 GO:GO:0019556
            GO:GO:0019557 eggNOG:COG2986 GO:GO:0004397 KO:K01745
            TIGRFAMs:TIGR01225 CTD:3034 GeneTree:ENSGT00390000009047
            HOVERGEN:HBG004509 OMA:FLRPLKT EMBL:L07645 EMBL:AK014518
            EMBL:BC057637 IPI:IPI00118625 PIR:A46128 RefSeq:NP_034531.1
            UniGene:Mm.13000 ProteinModelPortal:P35492 SMR:P35492 STRING:P35492
            PhosphoSite:P35492 PaxDb:P35492 PRIDE:P35492
            Ensembl:ENSMUST00000129421 GeneID:15109 KEGG:mmu:15109
            InParanoid:P35492 NextBio:287506 Bgee:P35492 CleanEx:MM_HAL
            Genevestigator:P35492 GermOnline:ENSMUSG00000020017 Uniprot:P35492
        Length = 657

 Score = 488 (176.8 bits), Expect = 2.4e-46, P = 2.4e-46
 Identities = 144/485 (29%), Positives = 236/485 (48%)

Query:    53 MVAEYRKP--VVNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTD 110
             + ++YR+P   + L G++L+   +  +      ++L+  A + V+ S + +   + + T 
Sbjct:   103 LYSKYREPEKYIALDGDSLSTEDLVNLGKGRYKIKLTSIAEKKVQQSREVIDSIIKERTV 162

Query:   111 SYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNT 170
              YG+TTGFG  + R       LQ+  +  + +   G G   S   P    R  + +R+N 
Sbjct:   163 VYGITTGFGKFA-RTVIPANKLQELQVNLVRSHSSGVGKPLS---PERC-RMLLALRINV 217

Query:   171 LLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATG 230
             L +GYSGI  E L+ + +  N +    +P +GT+ ASGDL PLS++A  L G    K   
Sbjct:   218 LAKGYSGISLETLKQVIEAFNASCLSYVPEKGTVGASGDLAPLSHLALGLIGE--GKMWS 275

Query:   231 PNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSA 290
             P     DA+   +  G     L+PKEGLAL+NGT + + L    L  A+ +A  ++I++A
Sbjct:   276 PKSGWADAKYVLEAHGLKPIVLKPKEGLALINGTQMITSLGCEALERASAIARQADIVAA 335

Query:   291 IFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHEI-DPLQKPK 349
             +  EV++G  +  D   H ++ H GQIE A     +LD   + +   + H   D +Q   
Sbjct:   336 LTLEVLKGTTKAFDTDIHAVRPHRGQIEVAFRFRSLLDSDHHPSEIAESHRFCDRVQ--- 392

Query:   350 QDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGV 409
              D Y LR  PQ  G   + I F    I  E+NS  DNP++  SR + + GGNF G     
Sbjct:   393 -DAYTLRCCPQVHGVVNDTIAFVKDIITTELNSATDNPMVFASRGETISGGNFHGEYPAK 451

Query:   410 SMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNL--SGGRNPSLDYGFKGAEIAMASY 467
             ++D   + +  +  +   +   L N   +  LP+ L   GG N     GF  A    A+ 
Sbjct:   452 ALDYLAIGVHELAAISERRIERLCNPSLSE-LPAFLVAEGGLNS----GFMIAHCTAAAL 506

Query:   468 CSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAID- 526
              SE + L +P +    S     +D  S+G  ++RK    V+ ++ + +  L+A CQ I+ 
Sbjct:   507 VSESKALCHPSSVDSLSTSAATEDHVSMGGWAARKALRVVEHVEQVLAIELLAACQGIEF 566

Query:   527 LRHLE 531
             LR L+
Sbjct:   567 LRPLK 571


>RGD|68363 [details] [associations]
            symbol:Hal "histidine ammonia lyase" species:10116 "Rattus
           norvegicus" [GO:0004397 "histidine ammonia-lyase activity"
           evidence=ISO;IDA;TAS] [GO:0005829 "cytosol" evidence=TAS]
           [GO:0006547 "histidine metabolic process" evidence=TAS] [GO:0006548
           "histidine catabolic process" evidence=ISO] [GO:0009058
           "biosynthetic process" evidence=IEA] [GO:0019556 "histidine
           catabolic process to glutamate and formamide" evidence=IEA]
           [GO:0019557 "histidine catabolic process to glutamate and formate"
           evidence=IEA] InterPro:IPR001106 InterPro:IPR005921
           InterPro:IPR008948 InterPro:IPR022313 Pfam:PF00221 PROSITE:PS00488
           UniPathway:UPA00379 RGD:68363 GO:GO:0005829 GO:GO:0009058
           Gene3D:1.10.275.10 InterPro:IPR024083 SUPFAM:SSF48557 GO:GO:0006547
           GO:GO:0019556 GO:GO:0019557 eggNOG:COG2986 GO:GO:0004397
           HOGENOM:HOG000237619 KO:K01745 TIGRFAMs:TIGR01225 CTD:3034
           GeneTree:ENSGT00390000009047 HOVERGEN:HBG004509 OrthoDB:EOG4MW85M
           EMBL:M58308 EMBL:BC089809 IPI:IPI00201103 PIR:A36087
           RefSeq:NP_058855.1 UniGene:Rn.10037 ProteinModelPortal:P21213
           IntAct:P21213 STRING:P21213 PhosphoSite:P21213 PRIDE:P21213
           Ensembl:ENSRNOT00000006971 GeneID:29301 KEGG:rno:29301
           UCSC:RGD:68363 InParanoid:P21213 NextBio:608720 ArrayExpress:P21213
           Genevestigator:P21213 GermOnline:ENSRNOG00000004502 Uniprot:P21213
        Length = 657

 Score = 486 (176.1 bits), Expect = 4.1e-46, P = 4.1e-46
 Identities = 142/485 (29%), Positives = 237/485 (48%)

Query:    53 MVAEYRKP--VVNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTD 110
             + ++YR+P   + L G++L+   +  +      ++L+  A + V+ S + +   + + T 
Sbjct:   103 LYSKYREPEKYIALDGDSLSTEDLVNLGKGHYKIKLTSIAEKKVQQSREVIDSIIKERTV 162

Query:   111 SYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNT 170
              YG+TTGFG  + R       LQ+  +  + +   G G   S   P    R  + +R+N 
Sbjct:   163 VYGITTGFGKFA-RTVIPANKLQELQVNLVRSHSSGVGKPLS---PERC-RMLLALRINV 217

Query:   171 LLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATG 230
             L +GYSGI  E L+ + ++ N +    +P +GT+ ASGDL PLS++A  L G    K   
Sbjct:   218 LAKGYSGISLETLKQVIEVFNASCLSYVPEKGTVGASGDLAPLSHLALGLIGE--GKMWS 275

Query:   231 PNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSA 290
             P     DA+   +  G     L+PKEGLAL+NGT + + L    +  A+ +A  ++I++A
Sbjct:   276 PKSGWADAKYVLEAHGLKPIVLKPKEGLALINGTQMITSLGCEAVERASAIARQADIVAA 335

Query:   291 IFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHEI-DPLQKPK 349
             +  EV++G  +  D   H ++ H GQIE A     +LD   + +   + H   D +Q   
Sbjct:   336 LTLEVLKGTTKAFDTDIHAVRPHRGQIEVAFRFRSLLDSDHHPSEIAESHRFCDRVQ--- 392

Query:   350 QDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGV 409
              D Y LR  PQ  G   + I F    I  E+NS  DNP++  SR + + GGNF G     
Sbjct:   393 -DAYTLRCCPQVHGVVNDTIAFVKDIITTELNSATDNPMVFASRGETISGGNFHGEYPAK 451

Query:   410 SMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNL--SGGRNPSLDYGFKGAEIAMASY 467
             ++D   + +  +  +   +   L N   +  LP+ L   GG N     GF  A    A+ 
Sbjct:   452 ALDYLAIGVHELAAISERRIERLCNPSLSE-LPAFLVAEGGLNS----GFMIAHCTAAAL 506

Query:   468 CSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAID- 526
              SE + L +P +    S     +D  S+G  ++RK    ++ ++ + +  L+A CQ I+ 
Sbjct:   507 VSESKALCHPSSVDSLSTSAATEDHVSMGGWAARKALRVIEHVEQVLAIELLAACQGIEF 566

Query:   527 LRHLE 531
             LR L+
Sbjct:   567 LRPLK 571


>WB|WBGene00009813 [details] [associations]
            symbol:haly-1 species:6239 "Caenorhabditis elegans"
            [GO:0006548 "histidine catabolic process" evidence=IEA;IMP]
            [GO:0009058 "biosynthetic process" evidence=IEA] [GO:0016841
            "ammonia-lyase activity" evidence=IEA] [GO:0004397 "histidine
            ammonia-lyase activity" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0055069 "zinc ion homeostasis" evidence=IMP]
            InterPro:IPR001106 InterPro:IPR005921 InterPro:IPR008948
            InterPro:IPR022313 Pfam:PF00221 PROSITE:PS00488 UniPathway:UPA00379
            GO:GO:0005737 GO:GO:0009058 EMBL:Z68004 GO:GO:0055069
            Gene3D:1.10.275.10 InterPro:IPR024083 SUPFAM:SSF48557 GO:GO:0006548
            GO:GO:0019556 GO:GO:0019557 eggNOG:COG2986 GO:GO:0004397
            HOGENOM:HOG000237619 KO:K01745 TIGRFAMs:TIGR01225
            GeneTree:ENSGT00390000009047 PIR:T22333 RefSeq:NP_509820.1
            ProteinModelPortal:Q20502 SMR:Q20502 DIP:DIP-27218N IntAct:Q20502
            MINT:MINT-117897 STRING:Q20502 PaxDb:Q20502 EnsemblMetazoa:F47B10.2
            GeneID:181279 KEGG:cel:CELE_F47B10.2 UCSC:F47B10.2 CTD:181279
            WormBase:F47B10.2 InParanoid:Q20502 OMA:NAPVYGI NextBio:913256
            Uniprot:Q20502
        Length = 677

 Score = 450 (163.5 bits), Expect = 3.3e-40, P = 3.3e-40
 Identities = 143/508 (28%), Positives = 246/508 (48%)

Query:    43 KGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVM 102
             K S  + +  MV      ++ L G +L    +         ++LS  + + ++ +  ++ 
Sbjct:   111 KVSFADSLAPMVLAPPTKLLILDGNSLLPEDLVRCEKGECAIQLSMESEDRIRKARTFLE 170

Query:   103 ESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRA 162
             +  ++    YGVTTGFG  S+  T     L+K  +  + +   G G   +   P+ A R 
Sbjct:   171 KIASEHRAVYGVTTGFGTFSNV-TIPPEKLKKLQLNLIRSHATGYGEPLA---PNRA-RM 225

Query:   163 AMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIA-GLL- 220
              + +R+N L +G+SGI  E ++ +    N      +P +GT+  SGDL PL+++A GLL 
Sbjct:   226 LLALRINILAKGHSGISVENIKKMIAAFNAFCVSYVPQQGTVGCSGDLCPLAHLALGLLG 285

Query:   221 TGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANN 280
              G+  S  TG       A    K+      EL PKEGLAL+NGT + + L +  L  A+N
Sbjct:   286 EGKMWSPTTGWQ----PADVVLKKNNLEPLELGPKEGLALINGTQMVTALGAYTLERAHN 341

Query:   281 LALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLH 340
             +A  +++++A+  +V++G     D   H+++ H GQ  +A  +  +L   +  +   + H
Sbjct:   342 IARQADVIAALSLDVLKGTTRAYDPDIHRIRPHRGQNLSALRLRALLHSEANPSQIAESH 401

Query:   341 EIDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGG 400
                   K  QD Y LR  PQ  G   + I F  + I  E+NS  DNPL+   R + + GG
Sbjct:   402 R--NCTKV-QDAYTLRCVPQVHGVVHDTIEFVREIITTEMNSATDNPLVFADREEIISGG 458

Query:   401 NFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGA 460
             NF G     ++D   +A+A + ++   +   LVN   + GLP+ L+   +  L+ GF   
Sbjct:   459 NFHGEYPAKALDFLAIAVAELAQMSERRLERLVNKELS-GLPTFLTP--DGGLNSGFMTV 515

Query:   461 EIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVA 520
             ++  AS  SE + L +P +        + +D  S+G  ++RK    V+ ++ + +  L+A
Sbjct:   516 QLCAASLVSENKVLCHPSSVDSIPTSCNQEDHVSMGGFAARKALTVVEHVEAVLAMELLA 575

Query:   521 LCQAID-LRHLEENLK-HTVKNTVSQVA 546
              CQ I+ L+ L      H +   V  VA
Sbjct:   576 ACQGIEFLKPLISTAPLHKIYQLVRSVA 603


>DICTYBASE|DDB_G0288025 [details] [associations]
            symbol:hal "histidase" species:44689 "Dictyostelium
            discoideum" [GO:0016841 "ammonia-lyase activity" evidence=IEA]
            [GO:0009058 "biosynthetic process" evidence=IEA] [GO:0006548
            "histidine catabolic process" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0004397 "histidine ammonia-lyase activity"
            evidence=IEA;ISS] [GO:0003824 "catalytic activity" evidence=IEA]
            [GO:0016829 "lyase activity" evidence=IEA] [GO:0006547 "histidine
            metabolic process" evidence=IEA] [GO:0019557 "histidine catabolic
            process to glutamate and formate" evidence=IEA] [GO:0019556
            "histidine catabolic process to glutamate and formamide"
            evidence=IEA] InterPro:IPR001106 InterPro:IPR005921
            InterPro:IPR008948 InterPro:IPR022313 Pfam:PF00221 PROSITE:PS00488
            UniPathway:UPA00379 dictyBase:DDB_G0288025 GO:GO:0005737
            GO:GO:0009058 GenomeReviews:CM000154_GR EMBL:AAFI02000107
            Gene3D:1.10.275.10 InterPro:IPR024083 SUPFAM:SSF48557 GO:GO:0019556
            GO:GO:0019557 eggNOG:COG2986 ProtClustDB:CLSZ2429936 GO:GO:0004397
            KO:K01745 TIGRFAMs:TIGR01225 OMA:NAPVYGI RefSeq:XP_636944.1
            HSSP:P21310 ProteinModelPortal:Q54JI7 STRING:Q54JI7
            EnsemblProtists:DDB0231727 GeneID:8626419 KEGG:ddi:DDB_G0288025
            Uniprot:Q54JI7
        Length = 539

 Score = 366 (133.9 bits), Expect = 3.4e-31, P = 3.4e-31
 Identities = 140/490 (28%), Positives = 212/490 (43%)

Query:    61 VVNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGA 120
             +V L G TL +  +  I     NV +++   E ++   + + + +      YG+ TGFG 
Sbjct:     7 IVYLNGNTLKIEDLINIGYRGYNVSITQEVEELIQKGRNVIDDILKSEKTVYGINTGFGL 66

Query:   121 TSHRRTKNGGA--LQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGI 178
              S           LQ  LIR  ++G+   GT     L    TR  + +R+N L +GYSGI
Sbjct:    67 FSDVIIPPDQVKMLQVNLIRSHSSGV---GTP----LTPERTRMLLALRINVLTKGYSGI 119

Query:   179 RFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDA 238
               E ++   K+LN N  P +P +GT+ ASGDL PLS++A  + G       G +G    +
Sbjct:   120 TLETVKRAIKILNGNCLPLVPEKGTVGASGDLAPLSHLALGMMGEGKMYDFGDSGNTFTS 179

Query:   239 QEASKQAGFGFFELQP-KEGLALVNGTAVGSGLASMVLFEANNLALLSEI-LSAIF-AEV 295
                     +  F+  P  E L   N T +    A   L   N   L++ +   A++  +V
Sbjct:   180 NLDVDVLEYRNFKFSPANEILKRQNLTPIELN-AKEGLALINGTQLITSLGAEAVYRCKV 238

Query:   296 MQGKPEFTDHLTHK-LK-----HHPGQIEAAAIMEHILDGSSYVNAAKKLH------EID 343
             +         +T + LK     +HP  I AA    H   G         LH      EI 
Sbjct:   239 LAETANIITAMTFEALKGLTAAYHP-LIHAAR--PHSGQGRVAAFLRSVLHSDQYPSEIT 295

Query:   344 PLQKPK---QDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLI-DVSRN-KALH 398
                K     QD Y LR  PQ  G   + I F    I  E+NS  DNP++ D       + 
Sbjct:   296 LANKDTKKVQDSYTLRCVPQVHGIVFDTIDFVQGIINTEMNSATDNPMVFDTDELCGTIS 355

Query:   399 GGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFK 458
             GGNF G     ++D   + I  +  +   +   LVN   ++GLPS L  G    L+ GF 
Sbjct:   356 GGNFHGEYPAKALDYLTIGIHELSNISERRLERLVNSQLSDGLPSFLVNGGG--LNSGFM 413

Query:   459 GAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFL 518
              A    A+  SE + L +P +    S     +D  S+G  S+RK    V+ ++ + +  L
Sbjct:   414 IAHCTSAALVSENKVLVHPSSADTISTSSAKEDHVSMGGWSARKCLNVVENVENVLAIEL 473

Query:   519 VALCQAIDLR 528
             +A CQ +D R
Sbjct:   474 LAACQGLDFR 483


>TIGR_CMR|SO_3299 [details] [associations]
            symbol:SO_3299 "Pal/histidase family protein"
            species:211586 "Shewanella oneidensis MR-1" [GO:0006520 "cellular
            amino acid metabolic process" evidence=ISS] [GO:0016841
            "ammonia-lyase activity" evidence=ISS] InterPro:IPR001106
            InterPro:IPR008948 Pfam:PF00221 GO:GO:0009058 EMBL:AE014299
            GenomeReviews:AE014299_GR Gene3D:1.10.275.10 InterPro:IPR024083
            SUPFAM:SSF48557 GO:GO:0016841 HOGENOM:HOG000237620
            RefSeq:NP_718853.1 ProteinModelPortal:Q8EC45 GeneID:1170986
            KEGG:son:SO_3299 PATRIC:23526280 OMA:VIHISAW ProtClustDB:CLSK907092
            Uniprot:Q8EC45
        Length = 549

 Score = 255 (94.8 bits), Expect = 1.6e-18, P = 1.6e-18
 Identities = 117/501 (23%), Positives = 223/501 (44%)

Query:    64 LGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSH 123
             L G +LTV ++  I+ S  +V +S+   E ++AS    +++   G   YG+T  +GA   
Sbjct:    25 LDGTSLTVDKLWEISKSGEDVNISKEGWERIRASYKAPIDAAEDGRSIYGLTVNYGALKD 84

Query:   124 RRTKNGGALQKE-----LIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGI 178
             +R   G +++ E      I+F    +          LP + ++ AM++R+N +  G++G+
Sbjct:    85 QRVA-GASVENEPNRSESIKFNERQMRIQAAGMEPFLPEAESKMAMVIRLNQMAAGFTGM 143

Query:   179 RFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEIIDA 238
               +   A  + +N+++ P +P RG+  A+ DL  ++++   L G  +    G       +
Sbjct:   144 SVDAANAYMEYINNDVYPLIPSRGSEGAN-DLSMVTHVGLALMGEWDVMYQGKRRS---S 199

Query:   239 QEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQG 298
              E  K+ G   ++    +G+++++ + V    +   + +  +L  LS ++ A   E + G
Sbjct:   200 AEVRKELGLKKYQPFGMDGISILSNSNVAEAQSITAVKKVEHLLDLSSVIIASSLEALNG 259

Query:   299 KPE-FTDHLTHKLKHHPGQIEAA-AIMEHILDGSSYVNAAKKLHEIDPLQKPKQDRYALR 356
                 F  H T   K  P   EAA +I+ H L GS Y      L  +D  ++  QD  + R
Sbjct:   260 NVSPFLWH-TVDTKGWPQGHEAAESILSH-LKGS-Y------LWSLDS-KRNLQDPLSFR 309

Query:   357 TSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKAL------------------- 397
             +S Q L    E +R A + +   IN   DNP++  +    L                   
Sbjct:   310 SSGQILAAAKEELRQAKELLNTAINHTTDNPIVHTNARDDLWYSNSDYVDGLRVGGKNVF 369

Query:   398 --HGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDY 455
                G NF  T + V +++   A+A +  +   + ++L +D +   L + L    N   D 
Sbjct:   370 VNSGSNFDNTQLAVQLESLSRALAQVIHISAWRTTQL-DDGHRTKLTTYLISKENVGGD- 427

Query:   456 GFKGAEIAMASYCSELQFLANPVTNH-VQSAEQHNQDVNSLGLISSRKTAEAVDILKLMS 514
             GF     +M+   +E   L N    + V ++    +  +++ LI++R    A DI   + 
Sbjct:   428 GFANIAQSMSGLYAEAMSLTNSAAIYGVPTSVGIEETFSNVNLIANRLDKIA-DIAYEIY 486

Query:   515 STFLVALCQAIDLRHLEENLK 535
             S  ++   Q +D+R  E + K
Sbjct:   487 SYEVLHTTQGMDIRTKEYSQK 507


>UNIPROTKB|F8VNX0 [details] [associations]
            symbol:HAL "Histidine ammonia-lyase" species:9606 "Homo
            sapiens" [GO:0009058 "biosynthetic process" evidence=IEA]
            [GO:0016841 "ammonia-lyase activity" evidence=IEA]
            InterPro:IPR001106 InterPro:IPR008948 InterPro:IPR022313
            Pfam:PF00221 PROSITE:PS00488 GO:GO:0009058 Gene3D:1.10.275.10
            InterPro:IPR024083 SUPFAM:SSF48557 GO:GO:0016841 EMBL:AC007298
            EMBL:AC126174 HGNC:HGNC:4806 IPI:IPI01021988
            ProteinModelPortal:F8VNX0 SMR:F8VNX0 Ensembl:ENST00000552509
            ArrayExpress:F8VNX0 Bgee:F8VNX0 Uniprot:F8VNX0
        Length = 336

 Score = 226 (84.6 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
 Identities = 55/145 (37%), Positives = 84/145 (57%)

Query:   156 PHSATRAAMLV--RVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPL 213
             P S  R  ML+  R+N L +GYSGI  E L+ + ++ N +  P +P +GT+ ASGDL PL
Sbjct:   189 PLSPERCRMLLALRINVLAKGYSGISLETLKQVIEMFNASCLPYVPEKGTVGASGDLAPL 248

Query:   214 SYIAGLLTGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASM 273
             S++A  L G    K   P     DA+   +  G     L+PKEGLAL+NGT + + L   
Sbjct:   249 SHLALGLVGE--GKMWSPKSGWADAKYVLEAHGLKPVILKPKEGLALINGTQMITSLGCE 306

Query:   274 VLFEANNLALLSEILSAIFAEVMQG 298
              +  A+ +A  ++I++A+  EV++G
Sbjct:   307 AVERASAIARQADIVAALTLEVLKG 331

 Score = 58 (25.5 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
 Identities = 22/99 (22%), Positives = 46/99 (46%)

Query:    16 LEGLCKNNNYN--YSSGDALNWGVMAETLKGSHLEEVKRMVAEYRKP--VVNLGGETLTV 71
             LE   +NN +      GDA++   +    +G +L       ++YR+P   + L G+ LT 
Sbjct:    70 LEVALENNEFVEVVIEGDAMSPDFIPSQPEGVYL------YSKYREPEKYIELDGDRLTT 123

Query:    72 AQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTD 110
               +  +      ++L+ +A + V+ S + +   + + TD
Sbjct:   124 EDLVNLGKGRYKIKLTPTAEKRVQKSREVIDSIIKEKTD 162


>TIGR_CMR|SO_3057 [details] [associations]
            symbol:SO_3057 "Pal/histidase family protein"
            species:211586 "Shewanella oneidensis MR-1" [GO:0006520 "cellular
            amino acid metabolic process" evidence=ISS] [GO:0016841
            "ammonia-lyase activity" evidence=ISS] InterPro:IPR001106
            InterPro:IPR008948 Pfam:PF00221 GO:GO:0009058 EMBL:AE014299
            GenomeReviews:AE014299_GR Gene3D:1.10.275.10 InterPro:IPR024083
            SUPFAM:SSF48557 GO:GO:0016841 KO:K01745 HOGENOM:HOG000237620
            RefSeq:NP_718622.2 ProteinModelPortal:Q8ECS5 GeneID:1170743
            KEGG:son:SO_3057 PATRIC:23525752 OMA:SHVGLAM ProtClustDB:CLSK906974
            Uniprot:Q8ECS5
        Length = 545

 Score = 236 (88.1 bits), Expect = 1.9e-16, P = 1.9e-16
 Identities = 114/491 (23%), Positives = 206/491 (41%)

Query:    62 VNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGAT 121
             V L G+ LT  Q  AIA  +  V+++  A+  +  + + +ME+   G   YG+T G G  
Sbjct:    25 VVLDGKHLTQDQAWAIADGA-KVKIAPQAKTQLVKAHELLMEAARLGKPVYGLTVGVGLN 83

Query:   122 S-HRRTKNGGALQKELI---RFLN-AGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYS 176
               H+     G L   ++   R  N + +  +        P   TR A+ VR+NT+L G +
Sbjct:    84 KDHKLFDANGKLSDAVLDASRSFNFSTLRAHSAGVGEAAPIRLTRVALAVRLNTMLAGQT 143

Query:   177 GIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEII 236
             G++ E+ E     LN  +TP +P +GT+    D++  S++   + G          G+ +
Sbjct:   144 GVQPEVAELYEAYLNKGLTPVIPSKGTV-GEADILLSSHVGLAMIGEWE---VFYKGQRV 199

Query:   237 DAQEASKQAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVM 296
              ++EA   AG        K+ L++++  A     A     EA  L  +S  +  +  E +
Sbjct:   200 SSKEAMADAGITPLVPMGKDALSILSNNAFAVAYAMQGYREAKQLLSVSPTVFGLSLEGL 259

Query:   297 QGK-PEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNAAKKLHEIDPLQKPKQDRYAL 355
              G    F    T+ ++  P    A + +   LDGS Y+    +L++    ++P QD  + 
Sbjct:   260 NGNVAPFLPQ-TNDIRPFPYIKTATSDILKQLDGS-YL---WQLND----ERPLQDPLSF 310

Query:   356 RTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKAL-------------HGG-- 400
             RT+        + +    + I  +IN  +DNP + V  +                 GG  
Sbjct:   311 RTTAYTFAGAEQALASLDEVINIQINHSDDNPAVIVGASNQYAQFPQVAKYVVEGQGGVF 370

Query:   401 ---NFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGF 457
                NF+  P+ +++ N  +A+  +      +   L ++ +   L   LS   N    + F
Sbjct:   371 PTTNFEPLPVALAVQNLSVALTHVSHNSVMRTIHLSDEHFTK-LTRFLSAPENQG--HAF 427

Query:   458 KGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTF 517
                + A        + LA PV+    S     +D  +   ++S    + VD  +++    
Sbjct:   428 GAIQKAFVDMQVRNKQLATPVSFDGISIAGGIEDTFTNLKLASDNLIQIVDNTRVIYGLE 487

Query:   518 LVALCQAIDLR 528
             L+   QAIDLR
Sbjct:   488 LLHSTQAIDLR 498


>UNIPROTKB|F8W0V1 [details] [associations]
            symbol:HAL "Histidine ammonia-lyase" species:9606 "Homo
            sapiens" [GO:0009058 "biosynthetic process" evidence=IEA]
            [GO:0016841 "ammonia-lyase activity" evidence=IEA]
            InterPro:IPR001106 InterPro:IPR008948 Pfam:PF00221 GO:GO:0009058
            Gene3D:1.10.275.10 InterPro:IPR024083 SUPFAM:SSF48557 GO:GO:0016841
            EMBL:AC007298 EMBL:AC126174 HGNC:HGNC:4806 IPI:IPI01022158
            ProteinModelPortal:F8W0V1 SMR:F8W0V1 Ensembl:ENST00000546579
            ArrayExpress:F8W0V1 Bgee:F8W0V1 Uniprot:F8W0V1
        Length = 157

 Score = 145 (56.1 bits), Expect = 5.0e-09, P = 5.0e-09
 Identities = 40/146 (27%), Positives = 72/146 (49%)

Query:    56 EYRKP--VVNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYG 113
             +YR+P   + L G+ LT   +  +      ++L+ +A + V+ S + +   + + T  YG
Sbjct:    16 KYREPEKYIELDGDRLTTEDLVNLGKGRYKIKLTPTAEKRVQKSREVIDSIIKEKTVVYG 75

Query:   114 VTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQ 173
             +TTGFG  + R       LQ+  +  + +   G G   S   P    R  + +R+N L +
Sbjct:    76 ITTGFGKFA-RTVIPINKLQELQVNLVRSHSSGVGKPLS---PERC-RMLLALRINVLAK 130

Query:   174 GYSGIRFEILEAITKLLNHNITPCLP 199
             GYSGI  E L+ + ++ N +  P +P
Sbjct:   131 GYSGISLETLKQVIEMFNASCLPYVP 156


>DICTYBASE|DDB_G0285259 [details] [associations]
            symbol:DDB_G0285259 species:44689 "Dictyostelium
            discoideum" [GO:0016841 "ammonia-lyase activity" evidence=IEA]
            [GO:0009058 "biosynthetic process" evidence=IEA] [GO:0003824
            "catalytic activity" evidence=IEA] InterPro:IPR001106
            InterPro:IPR008948 Pfam:PF00221 dictyBase:DDB_G0285259
            GO:GO:0009058 Gene3D:1.10.275.10 InterPro:IPR024083 SUPFAM:SSF48557
            EMBL:AAFI02000077 GO:GO:0016841 eggNOG:COG2986 RefSeq:XP_638296.1
            ProteinModelPortal:Q54NH3 EnsemblProtists:DDB0186415 GeneID:8625012
            KEGG:ddi:DDB_G0285259 OMA:SCFLNAL Uniprot:Q54NH3
        Length = 683

 Score = 91 (37.1 bits), Expect = 0.00012, Sum P(3) = 0.00012
 Identities = 39/160 (24%), Positives = 76/160 (47%)

Query:   377 EREINSVNDNPLIDVSRNKALH--GGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELV- 433
             E+E+N   DNPLI  + +  L    GN     + +SMD  RL++    +    + S+L  
Sbjct:   447 EKEMNLCVDNPLIQSNEDNGLPYTNGNIDSGLLSLSMDTLRLSLCRCIQTQAQRISKLPW 506

Query:   434 NDFYN--NGLPSNLSGGRNPSLD----YGFKGAEIAM--ASYCSELQFLANPVTNH---V 482
             N+F N  N   S   G +  +++    Y ++   +    +S  S +Q L+ PV      +
Sbjct:   507 NEFNNFQNFNSSGSVGSKQHTIEQQKNYHYQILNLCKIASSIVSTIQQLSQPVLTQQSGM 566

Query:   483 QSAEQHNQDVNSLGLISSRKTAEAVDI-LKLMSSTFLVAL 521
             Q  E + +D +S   +S + T + ++   KL++   ++++
Sbjct:   567 QLCEGY-EDTSSQAPLSIKNTKQLIEQGWKLITIEIIISI 605

 Score = 86 (35.3 bits), Expect = 0.00012, Sum P(3) = 0.00012
 Identities = 26/85 (30%), Positives = 43/85 (50%)

Query:   151 SSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDL 210
             S+  +P    RA++L+++N L  G SGI    L+++ K L  +  P L +      + D 
Sbjct:   168 SNDYIPDKVLRASLLIQLNLLSSGTSGISLLTLDSLIKRLKEDNLP-LVIDNCSNGNSDS 226

Query:   211 VPLSYIAGLLTGRPNSKATGPNGEI 235
             + LS  +  L G+  S    PNG+I
Sbjct:   227 ISLSQASLPLIGKSISL---PNGKI 248

 Score = 44 (20.5 bits), Expect = 0.00012, Sum P(3) = 0.00012
 Identities = 22/83 (26%), Positives = 40/83 (48%)

Query:   251 ELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEIL--SAIFA-EVMQGKPEFTDHLT 307
             +L   E  +L+NG  +   LAS  L   N+++     L  SA FA E  +      + + 
Sbjct:   300 QLSILETNSLINGNCIT--LASGAL-TLNDVSCFLNALDTSASFAMEAFRVNLNSLNSVV 356

Query:   308 HKLKHHPGQIEAAAIMEHILDGS 330
              K+ +  GQ++ +   ++IL+ S
Sbjct:   357 SKVHNQNGQVQCSNNFQNILNFS 379


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.131   0.375    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      718       718   0.00085  121 3  11 23  0.44    34
                                                     36  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  34
  No. of states in DFA:  614 (65 KB)
  Total size of DFA:  339 KB (2171 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  67.35u 0.10s 67.45t   Elapsed:  00:00:03
  Total cpu time:  67.36u 0.10s 67.46t   Elapsed:  00:00:03
  Start:  Sat May 11 02:08:36 2013   End:  Sat May 11 02:08:39 2013
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with PAL1 PAL1 PAL1 PHE ammonia lyase 1	protein from Arabidopsis thaliana	0.
BLAST match view associations BLAST with PAL2 PAL2 PAL2 phenylalanine ammonia-lyase 2	protein from Arabidopsis thaliana	7.0e-315
BLAST match view associations BLAST with PAL4 PAL4 PAL4 phenylalanine ammonia-lyase 4	protein from Arabidopsis thaliana	9.4e-304
BLAST match view associations BLAST with SO_4374 SO_4374 SO_4374 histidine ammonia-lyase, putative	protein from Shewanella oneidensis MR-1	2.1e-54
BLAST match view associations BLAST with hutH hutH hutH Histidine ammonia-lyase	protein from Vibrio cholerae O1 biovar El Tor str. N16961	2.1e-54
BLAST match view associations BLAST with VC_1202 VC_1202 VC_1202 histidine ammonia-lyase	protein from Vibrio cholerae O1 biovar El Tor	2.1e-54
BLAST match view associations BLAST with tam tam tam Tyrosine 2,3-aminomutase	protein from Myxococcus fulvus	2.4e-53
BLAST match view associations BLAST with tam tam tam Tyrosine 2,3-aminomutase	protein from Myxococcus sp. Mx-B0	3.0e-53
BLAST match view associations BLAST with DDB_G0273787 DDB_G0273787 DDB_G0273787 putative histidine ammonia-lyase	gene from Dictyostelium discoideum	5.6e-52
BLAST match view associations BLAST with DDB_G0273081 DDB_G0273081 DDB_G0273081 putative histidine ammonia-lyase	gene from Dictyostelium discoideum	5.6e-52
BLAST match view associations BLAST with CPS_0908 CPS_0908 CPS_0908 histidine ammonia-lyase	protein from Colwellia psychrerythraea 34H	2.2e-50
BLAST match view associations BLAST with Rmet_0231 Rmet_0231 Rmet_0231 Tyrosine ammonia-lyase	protein from Cupriavidus metallidurans CH34	5.2e-49
BLAST match view associations BLAST with SO_0098 SO_0098 SO_0098 histidine ammonia-lyase	protein from Shewanella oneidensis MR-1	5.2e-49
BLAST match view associations BLAST with BA_3712 BA_3712 BA_3712 histidine ammonia-lyase	protein from Bacillus anthracis str. Ames	1.8e-48
BLAST match view associations BLAST with HAL HAL HAL Histidine ammonia-lyase	protein from Sus scrofa	2.3e-48
BLAST match view associations BLAST with HAL HAL HAL Histidine ammonia-lyase	protein from Gallus gallus	2.9e-48
BLAST match view associations BLAST with HAL HAL HAL Histidine ammonia-lyase	protein from Gallus gallus	2.9e-48
BLAST match view associations BLAST with cmdF cmdF cmdF Tyrosine 2,3-aminomutase	protein from Chondromyces crocatus	5.2e-48
BLAST match view associations BLAST with HAL HAL HAL Histidine ammonia-lyase	protein from Homo sapiens	1.6e-47
BLAST match view associations BLAST with HAL HAL HAL Histidine ammonia-lyase	protein from Canis lupus familiaris	2.1e-47
BLAST match view associations BLAST with HAL HAL HAL Histidine ammonia-lyase	protein from Bos taurus	8.2e-47
BLAST match view associations BLAST with hal hal hal histidine ammonia-lyase	gene_product from Danio rerio	1.8e-46
BLAST match view associations BLAST with SPO_2192 SPO_2192 SPO_2192 histidine ammonia-lyase	protein from Ruegeria pomeroyi DSS-3	2.4e-46
BLAST match view associations BLAST with Hal Hal Hal histidine ammonia lyase	protein from Mus musculus	2.4e-46
BLAST match view associations BLAST with Hal Hal Hal histidine ammonia lyase	gene from Rattus norvegicus	4.1e-46
BLAST match view associations BLAST with haly-1 haly-1 haly-1	gene from Caenorhabditis elegans	3.3e-40
BLAST match view associations BLAST with hal hal hal histidase	gene from Dictyostelium discoideum	3.4e-31
BLAST match view associations BLAST with SO_3299 SO_3299 SO_3299 Pal/histidase family protein	protein from Shewanella oneidensis MR-1	1.6e-18
BLAST match view associations BLAST with HAL HAL HAL Histidine ammonia-lyase	protein from Homo sapiens	2.2e-18
BLAST match view associations BLAST with SO_3057 SO_3057 SO_3057 Pal/histidase family protein	protein from Shewanella oneidensis MR-1	1.9e-16
BLAST match view associations BLAST with HAL HAL HAL Histidine ammonia-lyase	protein from Homo sapiens	5.0e-09
BLAST match view associations BLAST with DDB_G0285259 DDB_G0285259 DDB_G0285259	gene from Dictyostelium discoideum	0.00012