BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005033
(718 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 101/168 (60%), Gaps = 3/168 (1%)
Query: 69 KLQRFTYKELKNATNDFDEANVIGKGGSGTVFLGIARDGKLLAIKRLDTFSLQT-EREFQ 127
+L+RF+ +EL+ A+++F N++G+GG G V+ G DG L+A+KRL Q E +FQ
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 128 NELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFS--DGNLVLKWSQRFE 185
E++++ L+ L G+CM +R+LVY YM N S+ L + L W +R
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 143
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
I + A+ L +LH CDP +IH D+K +N+LLD + V DFGL+++
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 191
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 67/117 (57%), Gaps = 1/117 (0%)
Query: 572 SMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWC 631
++RGT+ ++APEY G EK D++ GV++L +++G+R LA + L+ W
Sbjct: 202 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD-LARLANDDDVMLLDWV 260
Query: 632 RHLAQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTPELRPDIGETVRILKGE 688
+ L + + LVD L+ +Y E+ I +AL C Q +P RP + E VR+L+G+
Sbjct: 261 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 101/168 (60%), Gaps = 3/168 (1%)
Query: 69 KLQRFTYKELKNATNDFDEANVIGKGGSGTVFLGIARDGKLLAIKRLDTFSLQT-EREFQ 127
+L+RF+ +EL+ A+++F N++G+GG G V+ G DG L+A+KRL Q E +FQ
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 128 NELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFS--DGNLVLKWSQRFE 185
E++++ L+ L G+CM +R+LVY YM N S+ L + L W +R
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 135
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
I + A+ L +LH CDP +IH D+K +N+LLD + V DFGL+++
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 183
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Query: 572 SMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWC 631
++RG + ++APEY G EK D++ GV++L +++G+R LA + L+ W
Sbjct: 194 AVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD-LARLANDDDVMLLDWV 252
Query: 632 RHLAQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTPELRPDIGETVRILKGE 688
+ L + + LVD L+ +Y E+ I +AL C Q +P RP + E VR+L+G+
Sbjct: 253 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 106/181 (58%), Gaps = 11/181 (6%)
Query: 54 VNRSRTIPFDSNAPLKLQRFTYKELKNATNDFDEANVIGKGGSGTVFLGIARDGKLLAIK 113
++ S +PF+S R +L+ ATN+FD +IG G G V+ G+ RDG +A+K
Sbjct: 16 LSSSYLVPFES------YRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK 69
Query: 114 RLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD 173
R S Q EF+ E++ L R P LV+L+G+C ERN+ IL+Y+YM N +L+ L+
Sbjct: 70 RRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS 129
Query: 174 G--NLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
+ + W QR EI + A+ L +LH +IH D+K N+LLD + K++DFG+S
Sbjct: 130 DLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGIS 186
Query: 232 R 232
+
Sbjct: 187 K 187
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 573 MRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCR 632
++GTL Y+ PEY G L EK+D+YS GV++ ++ R + + E NL W
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARS---AIVQSLPREMVNLAEWAV 257
Query: 633 HLAQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTPELRPDIGETV 682
G + ++VD L D E + A+ CL + E RP +G+ +
Sbjct: 258 ESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 106/181 (58%), Gaps = 11/181 (6%)
Query: 54 VNRSRTIPFDSNAPLKLQRFTYKELKNATNDFDEANVIGKGGSGTVFLGIARDGKLLAIK 113
++ S +PF+S R +L+ ATN+FD +IG G G V+ G+ RDG +A+K
Sbjct: 16 LSSSYLVPFES------YRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK 69
Query: 114 RLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD 173
R S Q EF+ E++ L R P LV+L+G+C ERN+ IL+Y+YM N +L+ L+
Sbjct: 70 RRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS 129
Query: 174 G--NLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
+ + W QR EI + A+ L +LH +IH D+K N+LLD + K++DFG+S
Sbjct: 130 DLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGIS 186
Query: 232 R 232
+
Sbjct: 187 K 187
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 573 MRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCR 632
++GTL Y+ PEY G L EK+D+YS GV++ ++ R + + E NL W
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARS---AIVQSLPREMVNLAEWAV 257
Query: 633 HLAQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTPELRPDIGETV 682
G + ++VD L D E + A+ CL + E RP +G+ +
Sbjct: 258 ESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 96/175 (54%), Gaps = 15/175 (8%)
Query: 69 KLQRFTYKELKNATNDFDE------ANVIGKGGSGTVFLGIARDGKLLAIKRL----DTF 118
+ F++ ELKN TN+FDE N +G+GG G V+ G + +A+K+L D
Sbjct: 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDIT 69
Query: 119 SLQTEREFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFS-DGNLV 177
+ + +++F E++++ + LV LLG+ + + LVY YMPN SL + L DG
Sbjct: 70 TEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP 129
Query: 178 LKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
L W R +I A + FLH + IH DIK +N+LLD K+SDFGL+R
Sbjct: 130 LSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLAR 181
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHL 634
GT Y+APE G + K+DIYS GV++L I++G + P L L
Sbjct: 197 GTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL----LDIKEEIE 251
Query: 635 AQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTPELRPDIGETVRILK 686
+ I + +D+++ +D + ++A CL + RPDI + ++L+
Sbjct: 252 DEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 96/175 (54%), Gaps = 15/175 (8%)
Query: 69 KLQRFTYKELKNATNDFDE------ANVIGKGGSGTVFLGIARDGKLLAIKRL----DTF 118
+ F++ ELKN TN+FDE N +G+GG G V+ G + +A+K+L D
Sbjct: 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDIT 69
Query: 119 SLQTEREFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFS-DGNLV 177
+ + +++F E++++ + LV LLG+ + + LVY YMPN SL + L DG
Sbjct: 70 TEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP 129
Query: 178 LKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
L W R +I A + FLH + IH DIK +N+LLD K+SDFGL+R
Sbjct: 130 LSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLAR 181
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHL 634
GT Y+APE G + K+DIYS GV++L I++G + P L L
Sbjct: 197 GTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL----LDIKEEIE 251
Query: 635 AQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTPELRPDIGETVRILK 686
+ I + +D+++ +D + ++A CL + RPDI + ++L+
Sbjct: 252 DEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 96/175 (54%), Gaps = 15/175 (8%)
Query: 69 KLQRFTYKELKNATNDFDE------ANVIGKGGSGTVFLGIARDGKLLAIKRL----DTF 118
+ F++ ELKN TN+FDE N +G+GG G V+ G + +A+K+L D
Sbjct: 5 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDIT 63
Query: 119 SLQTEREFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFS-DGNLV 177
+ + +++F E++++ + LV LLG+ + + LVY YMPN SL + L DG
Sbjct: 64 TEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP 123
Query: 178 LKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
L W R +I A + FLH + IH DIK +N+LLD K+SDFGL+R
Sbjct: 124 LSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLAR 175
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHL 634
GT Y+APE G + K+DIYS GV++L I++G + P L L
Sbjct: 191 GTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL----LDIKEEIE 245
Query: 635 AQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTPELRPDIGETVRILK 686
+ I + +D+++ +D + ++A CL + RPDI + ++L+
Sbjct: 246 DEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 93/175 (53%), Gaps = 15/175 (8%)
Query: 69 KLQRFTYKELKNATNDFDE------ANVIGKGGSGTVFLGIARDGKLLAIKRL----DTF 118
+ F++ ELKN TN+FDE N G+GG G V+ G + +A+K+L D
Sbjct: 2 RFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDIT 60
Query: 119 SLQTEREFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFS-DGNLV 177
+ + +++F E+++ + LV LLG+ + + LVY Y PN SL + L DG
Sbjct: 61 TEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPP 120
Query: 178 LKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
L W R +I A + FLH + IH DIK +N+LLD K+SDFGL+R
Sbjct: 121 LSWHXRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLAR 172
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHL 634
GT Y APE G + K+DIYS GV++L I++G + P L L
Sbjct: 188 GTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL----LDIKEEIE 242
Query: 635 AQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTPELRPDIGETVRILK 686
+ I + +D++ +D + ++A CL + RPDI + ++L+
Sbjct: 243 DEEKTIEDYIDKK-XNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 81 ATNDFDEANVIGKGGSGTVFLG-IARDGKLLAIKRL-------DTFSLQTEREFQNELQI 132
A N+ + IGKGG G V G + +D ++AIK L +T ++ +EFQ E+ I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 133 LGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
+ L P +V L Y + N +V E++P L L + + KWS + +++D+A
Sbjct: 77 MSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPI-KWSVKLRLMLDIAL 133
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDS-----DCRGKVSDFGLSRIKVEGEFGM 241
+E++ +PP++H D++ N+ L S KV+DFGLS+ V G+
Sbjct: 134 GIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGL 186
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 76/154 (49%), Gaps = 5/154 (3%)
Query: 84 DFDEANVIGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTER--EFQNELQILGGLRSPFL 141
D + IG G GTV G +A+K L ER EF E+ I+ LR P +
Sbjct: 38 DLNIKEKIGAGSFGTVHRA-EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 142 VTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNL-VLKWSQRFEIIMDVAKALEFLHFG 200
V +G + +V EY+ SL +L G L +R + DVAK + +LH
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-N 155
Query: 201 CDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIK 234
+PP++H D+K N+L+D KV DFGLSR+K
Sbjct: 156 RNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLK 189
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 89/174 (51%), Gaps = 17/174 (9%)
Query: 81 ATNDFDEANVIGKGGSGTVFLG-IARDGKLLAIKRL-------DTFSLQTEREFQNELQI 132
A N+ + IGKGG G V G + +D ++AIK L +T ++ +EFQ E+ I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 133 LGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
+ L P +V L Y + N +V E++P L L + + KWS + +++D+A
Sbjct: 77 MSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPI-KWSVKLRLMLDIAL 133
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDS-----DCRGKVSDFGLSRIKVEGEFGM 241
+E++ +PP++H D++ N+ L S KV+DFG S+ V G+
Sbjct: 134 GIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGL 186
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 89/174 (51%), Gaps = 17/174 (9%)
Query: 81 ATNDFDEANVIGKGGSGTVFLG-IARDGKLLAIKRL-------DTFSLQTEREFQNELQI 132
A N+ + IGKGG G V G + +D ++AIK L +T ++ +EFQ E+ I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 133 LGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
+ L P +V L Y + N +V E++P L L + + KWS + +++D+A
Sbjct: 77 MSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPI-KWSVKLRLMLDIAL 133
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDS-----DCRGKVSDFGLSRIKVEGEFGM 241
+E++ +PP++H D++ N+ L S KV+DF LS+ V G+
Sbjct: 134 GIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGL 186
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 76/155 (49%), Gaps = 5/155 (3%)
Query: 84 DFDEANVIGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTER--EFQNELQILGGLRSPFL 141
D + IG G GTV G +A+K L ER EF E+ I+ LR P +
Sbjct: 38 DLNIKEKIGAGSFGTVHRA-EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 142 VTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNL-VLKWSQRFEIIMDVAKALEFLHFG 200
V +G + +V EY+ SL +L G L +R + DVAK + +LH
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-N 155
Query: 201 CDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKV 235
+PP++H ++K N+L+D KV DFGLSR+K
Sbjct: 156 RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 78/156 (50%), Gaps = 17/156 (10%)
Query: 84 DFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGLRSP 139
DFD +GKG G V+L R K +LA+K L L+ E + + E++I LR P
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 140 FLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALE 195
++ L GY + + L+ EY P + LQ++ D + I ++A AL
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATY------ITELANALS 126
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
+ H VIH DIKP N+LL S+ K++DFG S
Sbjct: 127 YCH---SKRVIHRDIKPENLLLGSNGELKIADFGWS 159
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 568 SSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S T++ GTL Y+ PE EK D++SLGVL + G P
Sbjct: 165 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 78/156 (50%), Gaps = 17/156 (10%)
Query: 84 DFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGLRSP 139
DFD +GKG G V+L R K +LA+K L L+ E + + E++I LR P
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 140 FLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALE 195
++ L GY + + L+ EY P + LQ++ D + I ++A AL
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATY------ITELANALS 126
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
+ H VIH DIKP N+LL S+ K++DFG S
Sbjct: 127 YCH---SKRVIHRDIKPENLLLGSNGELKIADFGWS 159
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGL 136
A DF+ +GKG G V+L + K +LA+K L L+ E + + E++I L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPN----KSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
R P ++ L GY + + L+ EY P K LQ++ D + I ++A
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY------ITELAN 124
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL + H VIH DIKP N+LL S K++DFG S
Sbjct: 125 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGL 136
A DF+ +GKG G V+L + K +LA+K L L+ E + + E++I L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPN----KSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
R P ++ L GY + + L+ EY P K LQ++ D + I ++A
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY------ITELAN 124
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL + H VIH DIKP N+LL S K++DFG S
Sbjct: 125 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 160
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 568 SSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S T++ GTL Y+ PE EK D++SLGVL + G+ P
Sbjct: 166 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGL 136
A DF+ +GKG G V+L + K +LA+K L L+ E + + E++I L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
R P ++ L GY + + L+ EY P + LQ++ D + I ++A
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 136
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL + H VIH DIKP N+LL S K++DFG S
Sbjct: 137 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 172
Score = 32.7 bits (73), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 568 SSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S T++ GTL Y+ PE EK D++SLGVL + G+ P
Sbjct: 178 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 223
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 79/159 (49%), Gaps = 17/159 (10%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGL 136
A DF+ +GKG G V+L ++ K +LA+K L L+ E + + E++I L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
R P ++ L GY + + L+ EY P + LQ++ D + I ++A
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 119
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL + H VIH DIKP N+LL S K++DFG S
Sbjct: 120 ALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWS 155
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 568 SSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S ++ GTL Y+ PE EK D++SLGVL + G+ P
Sbjct: 161 SRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGL 136
A DF+ +GKG G V+L + K +LA+K L L+ E + + E++I L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
R P ++ L GY + + L+ EY P + LQ++ D + I ++A
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 145
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL + H VIH DIKP N+LL S K++DFG S
Sbjct: 146 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 181
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 568 SSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S T++ GTL Y+ PE EK D++SLGVL + G+ P
Sbjct: 187 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 232
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGL 136
A DF+ +GKG G V+L + K +LA+K L L+ E + + E++I L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
R P ++ L GY + + L+ EY P + LQ++ D + I ++A
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 124
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL + H VIH DIKP N+LL S K++DFG S
Sbjct: 125 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 160
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 568 SSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S T++ GTL Y+ PE EK D++SLGVL + G+ P
Sbjct: 166 SRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGL 136
A DF+ +GKG G V+L + K +LA+K L L+ E + + E++I L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
R P ++ L GY + + L+ EY P + LQ++ D + I ++A
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 121
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL + H VIH DIKP N+LL S K++DFG S
Sbjct: 122 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 157
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGL 136
A DF+ +GKG G V+L + K +LA+K L L+ E + + E++I L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
R P ++ L GY + + L+ EY P + LQ++ D + I ++A
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 145
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL + H VIH DIKP N+LL S K++DFG S
Sbjct: 146 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 181
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGL 136
A DF+ +GKG G V+L + K +LA+K L L+ E + + E++I L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
R P ++ L GY + + L+ EY P + LQ++ D + I ++A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 122
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL + H VIH DIKP N+LL S K++DFG S
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 158
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 568 SSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S T++ GTL Y+ PE EK D++SLGVL + G+ P
Sbjct: 164 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGL 136
A DF+ +GKG G V+L + K +LA+K L L+ E + + E++I L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
R P ++ L GY + + L+ EY P + LQ++ D + I ++A
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 120
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL + H VIH DIKP N+LL S K++DFG S
Sbjct: 121 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 156
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 568 SSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S T++ GTL Y+ PE EK D++SLGVL + G+ P
Sbjct: 162 SRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGL 136
A DF+ +GKG G V+L + K +LA+K L L+ E + + E++I L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
R P ++ L GY + + L+ EY P + LQ++ D + I ++A
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 124
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL + H VIH DIKP N+LL S K++DFG S
Sbjct: 125 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 160
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 568 SSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S T++ GTL Y+ PE EK D++SLGVL + G+ P
Sbjct: 166 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGL 136
A DF+ +GKG G V+L + K +LA+K L L+ E + + E++I L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
R P ++ L GY + + L+ EY P + LQ++ D + I ++A
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 120
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL + H VIH DIKP N+LL S K++DFG S
Sbjct: 121 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 156
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 563 FSRELSSTTSMRGTLC----YVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
F + + +S R TLC Y+ PE EK D++SLGVL + G+ P
Sbjct: 153 FGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGL 136
A DF+ +GKG G V+L + K +LA+K L L+ E + + E++I L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
R P ++ L GY + + L+ EY P + LQ++ D + I ++A
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 120
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL + H VIH DIKP N+LL S K++DFG S
Sbjct: 121 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 156
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 568 SSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S T + GTL Y+ PE EK D++SLGVL + G+ P
Sbjct: 162 SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 9/157 (5%)
Query: 79 KNATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILG 134
K +DFD +GKG G V+L + K ++A+K L L+ E + + E++I
Sbjct: 10 KFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 135 GLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKAL 194
LR P ++ + Y +R + L+ E+ P L + L G + S F + ++A AL
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF--MEELADAL 127
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
+ H + VIH DIKP N+L+ K++DFG S
Sbjct: 128 HYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS 161
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGL 136
A DF+ +GKG G V+L + K +LA+K L L+ E + + E++I L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
R P ++ L GY + + L+ EY P + LQ++ D + I ++A
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 124
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL + H VIH DIKP N+LL S K++DFG S
Sbjct: 125 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 160
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 568 SSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S T + GTL Y+ PE EK D++SLGVL + G+ P
Sbjct: 166 SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 9/157 (5%)
Query: 79 KNATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILG 134
K +DFD +GKG G V+L + K ++A+K L L+ E + + E++I
Sbjct: 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 135 GLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKAL 194
LR P ++ + Y +R + L+ E+ P L + L G + S F + ++A AL
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF--MEELADAL 127
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
+ H + VIH DIKP N+L+ K++DFG S
Sbjct: 128 HYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS 161
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGL 136
A DF+ +GKG G V+L + K +LA+K L L+ E + + E++I L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
R P ++ L GY + + L+ EY P + LQ++ D + I ++A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 119
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL + H VIH DIKP N+LL S K++DFG S
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 155
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 568 SSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S T + GTL Y+ PE EK D++SLGVL + G+ P
Sbjct: 161 SRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 9/157 (5%)
Query: 79 KNATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILG 134
K +DFD +GKG G V+L + K ++A+K L L+ E + + E++I
Sbjct: 11 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 70
Query: 135 GLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKAL 194
LR P ++ + Y +R + L+ E+ P L + L G + S F + ++A AL
Sbjct: 71 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF--MEELADAL 128
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
+ H + VIH DIKP N+L+ K++DFG S
Sbjct: 129 HYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS 162
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGL 136
A DF+ +GKG G V+L + K +LA+K L L+ E + + E++I L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
R P ++ L GY + + L+ EY P + LQ++ D + I ++A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 119
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL + H VIH DIKP N+LL S K++DFG S
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 155
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 568 SSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S T++ GTL Y+ PE EK D++SLGVL + G+ P
Sbjct: 161 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGL 136
A DF+ +GKG G V+L + K +LA+K L L+ E + + E++I L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
R P ++ L GY + + L+ EY P + LQ++ D + I ++A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 122
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL + H VIH DIKP N+LL S K++DFG S
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 158
Score = 30.0 bits (66), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 568 SSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S ++ GTL Y+ PE EK D++SLGVL + G+ P
Sbjct: 164 SRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGL 136
A DF+ +GKG G V+L + K +LA+K L L+ E + + E++I L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
R P ++ L GY + + L+ EY P + LQ++ D + I ++A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 119
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL + H VIH DIKP N+LL S K++DFG S
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 155
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 568 SSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S T + GTL Y+ PE EK D++SLGVL + G+ P
Sbjct: 161 SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGL 136
A DF+ +GKG G V+L + K +LA+K L L+ E + + E++I L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
R P ++ L GY + + L+ EY P + LQ++ D + I ++A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 119
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL + H VIH DIKP N+LL S K++DFG S
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 155
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 568 SSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S T + GTL Y+ PE EK D++SLGVL + G+ P
Sbjct: 161 SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGL 136
A DF+ +GKG G V+L + K +LA+K L L+ E + + E++I L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
R P ++ L GY + + L+ EY P + LQ++ D + I ++A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 122
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL + H VIH DIKP N+LL S K++DFG S
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 158
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 568 SSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S T++ GTL Y+ PE EK D++SLGVL + G+ P
Sbjct: 164 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGL 136
A DF+ +GKG G V+L + K +LA+K L L+ E + + E++I L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
R P ++ L GY + + L+ EY P + LQ++ D + I ++A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 122
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL + H VIH DIKP N+LL S K++DFG S
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGL 136
A DF+ +GKG G V+L + K +LA+K L L+ E + + E++I L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
R P ++ L GY + + L+ EY P + LQ++ D + I ++A
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 118
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL + H VIH DIKP N+LL S K++DFG S
Sbjct: 119 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 154
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 568 SSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S T++ GTL Y+ PE EK D++SLGVL + G+ P
Sbjct: 160 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 205
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 83 NDFDEANVIGKGGSGTVFLG-IARDGKLL--AIKRLDTFSLQTE-REFQNELQILGGL-R 137
ND +VIG+G G V I +DG + AIKR+ ++ + + R+F EL++L L
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKAL--- 194
P ++ LLG C R L EY P+ +L + L + VL+ F I A L
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRK--SRVLETDPAFAIANSTASTLSSQ 142
Query: 195 EFLHFGCD----------PPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ LHF D IH D+ N+L+ + K++DFGLSR
Sbjct: 143 QLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 190
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 83 NDFDEANVIGKGGSGTVFLG-IARDGKLL--AIKRLDTFSLQTE-REFQNELQILGGL-R 137
ND +VIG+G G V I +DG + AIKR+ ++ + + R+F EL++L L
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKAL--- 194
P ++ LLG C R L EY P+ +L + L + VL+ F I A L
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRK--SRVLETDPAFAIANSTASTLSSQ 132
Query: 195 EFLHFGCD----------PPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ LHF D IH D+ N+L+ + K++DFGLSR
Sbjct: 133 QLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 180
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGL 136
A DF+ +GKG G V+L + K +LA+K L L+ E + + E++I L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
R P ++ L GY + + L+ EY P + LQ++ D + I ++A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 119
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL + H VIH DIKP N+LL S K++DFG S
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 155
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 568 SSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S ++ GTL Y+ PE EK D++SLGVL + G+ P
Sbjct: 161 SRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGL 136
A DF+ +GKG G V+L + K +LA+K L L+ E + + E++I L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
R P ++ L GY + + L+ EY P + LQ++ D + I ++A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 119
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL + H VIH DIKP N+LL S K++DFG S
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 155
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 568 SSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S T + GTL Y+ PE EK D++SLGVL + G+ P
Sbjct: 161 SRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGL 136
A DF+ +GKG G V+L + K +LA+K L L+ E + + E++I L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
R P ++ L GY + + L+ EY P + LQ++ D + I ++A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 119
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL + H VIH DIKP N+LL S K++DFG S
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGL 136
A DF+ +GKG G V+L + K +LA+K L L+ E + + E++I L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
R P ++ L GY + + L+ EY P + LQ++ D + I ++A
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 123
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL + H VIH DIKP N+LL S K++DFG S
Sbjct: 124 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 159
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 568 SSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S T++ GTL Y+ PE EK D++SLGVL + G+ P
Sbjct: 165 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 210
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGL 136
A DF+ +GKG G V+L + K +LA+K L L+ E + + E++I L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
R P ++ L GY + + L+ EY P + LQ++ D + I ++A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 122
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL + H VIH DIKP N+LL S K++DFG S
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGL 136
A DF+ +GKG G V+L + K +LA+K L L+ E + + E++I L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
R P ++ L GY + + L+ EY P + LQ++ D + I ++A
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 116
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL + H VIH DIKP N+LL S K++DFG S
Sbjct: 117 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 152
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 568 SSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S T++ GTL Y+ PE EK D++SLGVL + G+ P
Sbjct: 158 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 203
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGL 136
A DF+ +GKG G V+L + K +LA+K L L+ E + + E++I L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
R P ++ L GY + + L+ EY P + LQ++ D + I ++A
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 121
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL + H VIH DIKP N+LL S K+++FG S
Sbjct: 122 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWS 157
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 568 SSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S T++ GTL Y+ PE EK D++SLGVL + G+ P
Sbjct: 163 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 208
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQ---TEREFQNELQILGGL 136
A DF+ +GKG G V+L + K +LA+K L L+ E + + E++I L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
R P ++ L GY + + L+ EY P + LQ++ D + I ++A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITELAN 122
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL + H VIH DIKP N+LL S K+++FG S
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWS 158
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 568 SSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S T++ GTL Y+ PE EK D++SLGVL + G+ P
Sbjct: 164 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 86/149 (57%), Gaps = 15/149 (10%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRL-DTF--SLQTEREFQNELQILGGLR-SPFLVTLL 145
+GKG G V+ I R G+++A+K++ D F S +R F+ E+ IL L +V LL
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNLL 75
Query: 146 GYCMERNKR--ILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
N R LV++YM L ++ ++ +L+ + ++ + K +++LH G
Sbjct: 76 NVLRADNDRDVYLVFDYMET-DLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSGG-- 129
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H D+KPSN+LL+++C KV+DFGLSR
Sbjct: 130 -LLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 83 NDFDEANVIGKGGSGTVFLG-IARDGKLL--AIKRLDTFSLQTE-REFQNELQILGGL-R 137
ND +VIG+G G V I +DG + AIKR+ ++ + + R+F EL++L L
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKAL--- 194
P ++ LLG C R L EY P+ +L + L + VL+ F I A L
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRK--SRVLETDPAFAIANSTASTLSSQ 139
Query: 195 EFLHFGCD----------PPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ LHF D IH ++ N+L+ + K++DFGLSR
Sbjct: 140 QLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR 187
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
IG G G V LG + +AIK + S+ +E +F E +++ L P LV L G C+E
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSM-SEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
+ LV+E+M + L + L + L + +DV + + +L C VIH D+
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 149
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
N L+ + KVSDFG++R ++ ++
Sbjct: 150 AARNCLVGENQVIKVSDFGMTRFVLDDQY 178
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 81/172 (47%), Gaps = 15/172 (8%)
Query: 89 NVIGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYC 148
IGKG G V LG R K+ A+K + + T + F E ++ LR LV LLG
Sbjct: 199 QTIGKGEFGDVMLGDYRGNKV-AVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 149 MERNKRI-LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIH 207
+E + +V EYM SL + L S G VL + +DV +A+E+L +H
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVH 312
Query: 208 GDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEFGMDLFSQDLGKSQELWKSQE 259
D+ NVL+ D KVSDFGL++ +QD GK W + E
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTKEASS--------TQDTGKLPVKWTAPE 356
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 86/183 (46%), Gaps = 15/183 (8%)
Query: 89 NVIGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYC 148
IGKG G V LG R K+ A+K + + T + F E ++ LR LV LLG
Sbjct: 18 QTIGKGEFGDVMLGDYRGNKV-AVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 149 MERNKRI-LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIH 207
+E + +V EYM SL + L S G VL + +DV +A+E+L +H
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVH 131
Query: 208 GDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEFGMDLFSQDLGKSQELWKSQELSGNLATA 267
D+ NVL+ D KVSDFGL++ +QD GK W + E A +
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLTKEASS--------TQDTGKLPVKWTAPEALREAAFS 183
Query: 268 TET 270
T++
Sbjct: 184 TKS 186
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 76/149 (51%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
IG G G V LG + +AIK + ++ +E +F E +++ L P LV L G C+E
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
+ LV+E+M + L + L + L + +DV + + +L C VIH D+
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAA-ETLLGMCLDVCEGMAYLEEAC---VIHRDL 132
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
N L+ + KVSDFG++R ++ ++
Sbjct: 133 AARNCLVGENQVIKVSDFGMTRFVLDDQY 161
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 76/149 (51%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
IG G G V LG + +AIK + ++ +E +F E +++ L P LV L G C+E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
+ LV+E+M + L + L + L + +DV + + +L C VIH D+
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 129
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
N L+ + KVSDFG++R ++ ++
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLDDQY 158
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 76/149 (51%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
IG G G V LG + +AIK + ++ +E +F E +++ L P LV L G C+E
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
+ LV+E+M + L + L + L + +DV + + +L C VIH D+
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 127
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
N L+ + KVSDFG++R ++ ++
Sbjct: 128 AARNCLVGENQVIKVSDFGMTRFVLDDQY 156
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G G G V LG + +A+K + S+ +E EF E Q + L P LV G C +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
+V EY+ N L L S G L+ SQ E+ DV + + FL IH D+
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGK-GLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDL 130
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
N L+D D KVSDFG++R ++ ++
Sbjct: 131 AARNCLVDRDLCVKVSDFGMTRYVLDDQY 159
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 81/172 (47%), Gaps = 15/172 (8%)
Query: 89 NVIGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYC 148
IGKG G V LG R K+ A+K + + T + F E ++ LR LV LLG
Sbjct: 27 QTIGKGEFGDVMLGDYRGNKV-AVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 149 MERNKRI-LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIH 207
+E + +V EYM SL + L S G VL + +DV +A+E+L +H
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVH 140
Query: 208 GDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEFGMDLFSQDLGKSQELWKSQE 259
D+ NVL+ D KVSDFGL++ +QD GK W + E
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLTKEASS--------TQDTGKLPVKWTAPE 184
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 81/172 (47%), Gaps = 15/172 (8%)
Query: 89 NVIGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYC 148
IGKG G V LG R K+ A+K + + T + F E ++ LR LV LLG
Sbjct: 12 QTIGKGEFGDVMLGDYRGNKV-AVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 149 MERNKRI-LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIH 207
+E + +V EYM SL + L S G VL + +DV +A+E+L +H
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVH 125
Query: 208 GDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEFGMDLFSQDLGKSQELWKSQE 259
D+ NVL+ D KVSDFGL++ +QD GK W + E
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTKEASS--------TQDTGKLPVKWTAPE 169
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 26/184 (14%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREF--------- 126
KE ND+ + +G + L +D K A+K+ + L+ +R+F
Sbjct: 24 KEKDKYINDYRIIRTLNQGKFNKIILC-EKDNKFYALKKYEKSLLEKKRDFTKSNNDKIS 82
Query: 127 --------QNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVL 178
+NELQI+ +++ + +T G ++ ++YEYM N S+ + F + VL
Sbjct: 83 IKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSI--LKFDEYFFVL 140
Query: 179 KWSQRFEIIMDVAKAL------EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ I + V K + F + + + H D+KPSN+L+D + R K+SDFG S
Sbjct: 141 DKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESE 200
Query: 233 IKVE 236
V+
Sbjct: 201 YMVD 204
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
IG G G V LG + +AIK + ++ +E +F E +++ L P LV L G C+E
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
+ LV E+M + L + L + L + +DV + + +L C VIH D+
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAA-ETLLGMCLDVCEGMAYLEEAC---VIHRDL 130
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
N L+ + KVSDFG++R ++ ++
Sbjct: 131 AARNCLVGENQVIKVSDFGMTRFVLDDQY 159
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 5/155 (3%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFL 141
+D V+GKG G R+ G+++ +K L F +T+R F E++++ L P +
Sbjct: 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNV 69
Query: 142 VTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGC 201
+ +G + + + EY+ +L+ ++ S + WSQR D+A + +LH
Sbjct: 70 LKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQ-YPWSQRVSFAKDIASGMAYLH--- 125
Query: 202 DPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVE 236
+IH D+ N L+ + V+DFGL+R+ V+
Sbjct: 126 SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVD 160
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
IG G G V LG + +AIK + ++ +E +F E +++ L P LV L G C+E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
+ LV+E+M + L + L + L + +DV + + +L + VIH D+
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLE---EASVIHRDL 129
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
N L+ + KVSDFG++R ++ ++
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLDDQY 158
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 84/175 (48%), Gaps = 20/175 (11%)
Query: 74 TYKELKNATNDFD---EAN------VIGKGGSGTVFLGIAR-DGKL---LAIKRLDT-FS 119
TY+E A F EA+ +IG G SG V G R G+ +AIK L ++
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 120 LQTEREFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFS-DGNLVL 178
+ R+F +E I+G P ++ L G ++V EYM N SL L + DG +
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI 150
Query: 179 KWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
Q ++ V + +L D +H D+ NVL+DS+ KVSDFGLSR+
Sbjct: 151 M--QLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV 200
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 84/175 (48%), Gaps = 20/175 (11%)
Query: 74 TYKELKNATNDFD---EAN------VIGKGGSGTVFLGIAR-DGKL---LAIKRLDT-FS 119
TY+E A F EA+ +IG G SG V G R G+ +AIK L ++
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 120 LQTEREFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFS-DGNLVL 178
+ R+F +E I+G P ++ L G ++V EYM N SL L + DG +
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI 150
Query: 179 KWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
Q ++ V + +L D +H D+ NVL+DS+ KVSDFGLSR+
Sbjct: 151 M--QLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV 200
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 26/162 (16%)
Query: 91 IGKGGSGTVFLGIA------RDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTL 144
+G+G G VFL +D L+A+K L S ++F E ++L L+ +V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 145 LGYCMERNKRILVYEYMPNKSLQE---------MLFSDGN--LVLKWSQRFEIIMDVAKA 193
G C+E + I+V+EYM + L + +L ++GN L SQ I +A
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 194 LEFL---HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ +L HF +H D+ N L+ + K+ DFG+SR
Sbjct: 141 MVYLASQHF------VHRDLATRNCLVGENLLVKIGDFGMSR 176
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 29/165 (17%)
Query: 91 IGKGGSGTVFLG------IARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTL 144
+G+G G VFL +D L+A+K L +L ++FQ E ++L L+ +V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 145 LGYCMERNKRILVYEYMPNKSLQEMLFSDGN----LV----------LKWSQRFEIIMDV 190
G C + + I+V+EYM + L + L + G LV L SQ I +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 191 AKALEFL---HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
A + +L HF +H D+ N L+ ++ K+ DFG+SR
Sbjct: 143 ASGMVYLASQHF------VHRDLATRNCLVGANLLVKIGDFGMSR 181
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 21/155 (13%)
Query: 91 IGKGGSGTVFLGIA-----RDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLL 145
+GKG G+V L G L+A+K+L +R+FQ E+QIL L S F+V
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 146 G--YCMERNKRILVYEYMPNKSLQEMLFS-----DGNLVLKWSQRFEIIMDVAKALEFLH 198
G Y R LV EY+P+ L++ L D + +L +S + + K +E+L
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ------ICKGMEYLG 144
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+H D+ N+L++S+ K++DFGL+++
Sbjct: 145 ---SRRCVHRDLAARNILVESEAHVKIADFGLAKL 176
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 21/155 (13%)
Query: 91 IGKGGSGTVFLGIA-----RDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLL 145
+GKG G+V L G L+A+K+L +R+FQ E+QIL L S F+V
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 146 G--YCMERNKRILVYEYMPNKSLQEMLFS-----DGNLVLKWSQRFEIIMDVAKALEFLH 198
G Y R LV EY+P+ L++ L D + +L +S + + K +E+L
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ------ICKGMEYLG 131
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+H D+ N+L++S+ K++DFGL+++
Sbjct: 132 ---SRRCVHRDLAARNILVESEAHVKIADFGLAKL 163
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 21/155 (13%)
Query: 91 IGKGGSGTVFLGIA-----RDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLL 145
+GKG G+V L G L+A+K+L +R+FQ E+QIL L S F+V
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 146 G--YCMERNKRILVYEYMPNKSLQEMLFS-----DGNLVLKWSQRFEIIMDVAKALEFLH 198
G Y R LV EY+P+ L++ L D + +L +S + + K +E+L
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ------ICKGMEYLG 132
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+H D+ N+L++S+ K++DFGL+++
Sbjct: 133 ---SRRCVHRDLAARNILVESEAHVKIADFGLAKL 164
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 6/152 (3%)
Query: 91 IGKGGSGTVFLGIAR-DGKLLAIKRL-DTFSLQTEREFQNELQILGGLRSPFLVTLLGYC 148
IG+G G VF G R D L+A+K +T + +F E +IL P +V L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 149 MERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHG 208
++ +V E + L ++G L+ +++ D A +E+L C IH
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVGDAAAGMEYLESKC---CIHR 237
Query: 209 DIKPSNVLLDSDCRGKVSDFGLSRIKVEGEFG 240
D+ N L+ K+SDFG+SR + +G +
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEADGVYA 269
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 80/155 (51%), Gaps = 21/155 (13%)
Query: 91 IGKGGSGTVFLGIA-----RDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLL 145
+GKG G+V L G L+A+K+L +R+FQ E+QIL L S F+V
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 146 G--YCMERNKRILVYEYMPNKSLQEMLFS-----DGNLVLKWSQRFEIIMDVAKALEFLH 198
G Y R + LV EY+P+ L++ L D + +L +S + + K +E+L
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ------ICKGMEYLG 128
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+H D+ N+L++S+ K++DFGL+++
Sbjct: 129 ---SRRCVHRDLAARNILVESEAHVKIADFGLAKL 160
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 29/207 (14%)
Query: 64 SNAPLKLQRFTYKELKNATNDFDEANVIGKGGSGTVFLGI-ARDGKLL----AIKRL-DT 117
AP + Q KE + V+G G GTV+ GI +G+ + AIK L +T
Sbjct: 24 GTAPNQAQLRILKE-----TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNET 78
Query: 118 FSLQTEREFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD---- 173
+ EF +E I+ + P LV LLG C+ + LV + MP+ L E +
Sbjct: 79 TGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNI 137
Query: 174 -GNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
L+L W + +AK + +L + ++H D+ NVL+ S K++DFGL+R
Sbjct: 138 GSQLLLNWC------VQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLAR 188
Query: 233 IKVEGEFGMDLFSQDLGKSQELWKSQE 259
+ +EG+ ++ D GK W + E
Sbjct: 189 L-LEGD--EKEYNADGGKMPIKWMALE 212
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G G G V G R +AIK + S+ +E EF E +++ L LV L G C +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
+ ++ EYM N L L + + Q E+ DV +A+E+L +H D+
Sbjct: 75 QRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 130
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
N L++ KVSDFGLSR ++ E+
Sbjct: 131 AARNCLVNDQGVVKVSDFGLSRYVLDDEY 159
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 6/149 (4%)
Query: 91 IGKGGSGTVFLGIAR-DGKLLAIKRL-DTFSLQTEREFQNELQILGGLRSPFLVTLLGYC 148
IG+G G VF G R D L+A+K +T + +F E +IL P +V L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 149 MERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHG 208
++ +V E + L ++G L+ +++ D A +E+L C IH
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVGDAAAGMEYLESKC---CIHR 237
Query: 209 DIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
D+ N L+ K+SDFG+SR + +G
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEADG 266
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G G G V G R +AIK + S+ +E EF E +++ L LV L G C +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
+ ++ EYM N L L + + Q E+ DV +A+E+L +H D+
Sbjct: 91 QRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 146
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
N L++ KVSDFGLSR ++ E+
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVLDDEY 175
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G G G V G R +AIK + S+ +E EF E +++ L LV L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
+ ++ EYM N L L + + Q E+ DV +A+E+L +H D+
Sbjct: 76 QRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 131
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
N L++ KVSDFGLSR ++ E+
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYVLDDEY 160
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G G G V G R +AIK + S+ +E EF E +++ L LV L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
+ ++ EYM N L L + + Q E+ DV +A+E+L +H D+
Sbjct: 76 QRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 131
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
N L++ KVSDFGLSR ++ E+
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYVLDDEY 160
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 9/156 (5%)
Query: 88 ANVIGKGGSGTVFLGIAR-DGKLLAIK---RLDTFSLQTEREFQNELQILGGLRSPFLVT 143
+ +G G G V +G G +A+K R SL + + E+Q L R P ++
Sbjct: 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
L + +V EY+ L + + +G L K S+R + + +++ H
Sbjct: 81 LYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRR--LFQQILSGVDYCHRHM-- 136
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
V+H D+KP NVLLD+ K++DFGLS + +GEF
Sbjct: 137 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 171
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G G G V G R +AIK + S+ +E EF E +++ L LV L G C +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
+ ++ EYM N L L + + Q E+ DV +A+E+L +H D+
Sbjct: 82 QRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 137
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
N L++ KVSDFGLSR ++ E+
Sbjct: 138 AARNCLVNDQGVVKVSDFGLSRYVLDDEY 166
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G G G V G R +AIK + S+ +E EF E +++ L LV L G C +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
+ ++ EYM N L L + + Q E+ DV +A+E+L +H D+
Sbjct: 71 QRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 126
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
N L++ KVSDFGLSR ++ E+
Sbjct: 127 AARNCLVNDQGVVKVSDFGLSRYVLDDEY 155
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 29/206 (14%)
Query: 65 NAPLKLQRFTYKELKNATNDFDEANVIGKGGSGTVFLGI-ARDGKLL----AIKRL-DTF 118
AP + Q KE + V+G G GTV+ GI +G+ + AIK L +T
Sbjct: 2 TAPNQAQLRILKE-----TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT 56
Query: 119 SLQTEREFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD----- 173
+ EF +E I+ + P LV LLG C+ + LV + MP+ L E +
Sbjct: 57 GPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIG 115
Query: 174 GNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
L+L W + +AK + +L + ++H D+ NVL+ S K++DFGL+R+
Sbjct: 116 SQLLLNWC------VQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARL 166
Query: 234 KVEGEFGMDLFSQDLGKSQELWKSQE 259
+EG+ ++ D GK W + E
Sbjct: 167 -LEGD--EKEYNADGGKMPIKWMALE 189
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 93/170 (54%), Gaps = 32/170 (18%)
Query: 80 NATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTF-----SLQTEREFQNELQIL 133
N ++DF +++G+G G V + G+++AIK+++ F +L+T RE ++IL
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLRE----IKIL 63
Query: 134 GGLRSPFLVTLLGYCMER-------NKRILVYEYMP---NKSLQEMLFSDGNLVLKWSQR 183
+ ++T+ ++R N+ ++ E M ++ + + SD ++ Q
Sbjct: 64 KHFKHENIITIFN--IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHI-----QY 116
Query: 184 FEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
F I +A++ LH G + VIH D+KPSN+L++S+C KV DFGL+RI
Sbjct: 117 F--IYQTLRAVKVLH-GSN--VIHRDLKPSNLLINSNCDLKVCDFGLARI 161
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 93/170 (54%), Gaps = 32/170 (18%)
Query: 80 NATNDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTF-----SLQTEREFQNELQIL 133
N ++DF +++G+G G V + G+++AIK+++ F +L+T RE ++IL
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLRE----IKIL 63
Query: 134 GGLRSPFLVTLLGYCMER-------NKRILVYEYMP---NKSLQEMLFSDGNLVLKWSQR 183
+ ++T+ ++R N+ ++ E M ++ + + SD ++ Q
Sbjct: 64 KHFKHENIITIFN--IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHI-----QY 116
Query: 184 FEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
F I +A++ LH G + VIH D+KPSN+L++S+C KV DFGL+RI
Sbjct: 117 F--IYQTLRAVKVLH-GSN--VIHRDLKPSNLLINSNCDLKVCDFGLARI 161
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 93/170 (54%), Gaps = 32/170 (18%)
Query: 80 NATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTF-----SLQTEREFQNELQIL 133
N ++DF +++G+G G V + G+++AIK+++ F +L+T RE ++IL
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLRE----IKIL 63
Query: 134 GGLRSPFLVTLLGYCMER-------NKRILVYEYMP---NKSLQEMLFSDGNLVLKWSQR 183
+ ++T+ ++R N+ ++ E M ++ + + SD ++ Q
Sbjct: 64 KHFKHENIITIFN--IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHI-----QY 116
Query: 184 FEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
F I +A++ LH G + VIH D+KPSN+L++S+C KV DFGL+RI
Sbjct: 117 F--IYQTLRAVKVLH-GSN--VIHRDLKPSNLLINSNCDLKVCDFGLARI 161
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 21/162 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLGI-ARDGK----LLAIKRL-DTFSLQTEREFQNELQILGGL 136
+ + V+G G GTV+ GI DG+ +AIK L + S + +E +E ++ G+
Sbjct: 17 TELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGV 76
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-GNL----VLKWSQRFEIIMDVA 191
SP++ LLG C+ + LV + MP L + + + G L +L W M +A
Sbjct: 77 GSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWC------MQIA 129
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
K + +L D ++H D+ NVL+ S K++DFGL+R+
Sbjct: 130 KGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARL 168
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 5/152 (3%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTEREFQNELQILGGLRSPFL 141
D + +G G G V++G+ + L +A+K L +++ E EF E ++ ++ P L
Sbjct: 32 TDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNL 90
Query: 142 VTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGC 201
V LLG C +V EYMP +L + L + + ++ A+E+L
Sbjct: 91 VQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE--- 147
Query: 202 DPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH D+ N L+ + KV+DFGLSR+
Sbjct: 148 KKNFIHRDLAARNCLVGENHVVKVADFGLSRL 179
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 25/191 (13%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIARDGKL---LAIKRL-------DTFSLQTEREFQNELQ 131
++ ++ ++G GG V L ARD +L +A+K L +F L+ RE QN
Sbjct: 11 SDRYELGEILGFGGMSEVHL--ARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNA-- 66
Query: 132 ILGGLRSPFLVTLLGYCMERNKR----ILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEII 187
L P +V + +V EY+ +L++++ ++G + K + E+I
Sbjct: 67 --AALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA--IEVI 122
Query: 188 MDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEFGMDLFSQD 247
D +AL F H +IH D+KP+N+++ + KV DFG++R + + +
Sbjct: 123 ADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 248 LGKSQELWKSQ 258
+G +Q L Q
Sbjct: 180 IGTAQYLSPEQ 190
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 28/47 (59%)
Query: 567 LSSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
++ T ++ GT Y++PE + ++D+YSLG ++ +++G P
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 71/148 (47%), Gaps = 5/148 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G G G V G R +AIK + S+ +E EF E +++ L LV L G C +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
+ ++ EYM N L L + + Q E+ DV +A+E+L +H D+
Sbjct: 91 QRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 146
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGE 238
N L++ KVSDFGLSR ++ E
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVLDDE 174
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 78 LKNATNDFDEANVIGKGGSGTVFLGIARDG-KLLAIKRLDTFSLQTERE---FQNELQIL 133
L+ D+D VIG+G G V L + K+ A+K L F + + F E I+
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIM 129
Query: 134 GGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKA 193
SP++V L + +V EYMP L ++ S+ ++ KW++ + +V A
Sbjct: 130 AFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM-SNYDVPEKWAKFY--TAEVVLA 186
Query: 194 LEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFG 229
L+ +H +IH D+KP N+LLD K++DFG
Sbjct: 187 LDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFG 219
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 21/189 (11%)
Query: 82 TNDFDEANVIGKGGSGTVFLGI-ARDGKLLAIK-------RLDTFSLQTEREFQNELQIL 133
++ ++ ++G GG V L RD + +A+K R +F L+ RE QN
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNA---- 66
Query: 134 GGLRSPFLVTLLGYCMERNKR----ILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMD 189
L P +V + +V EY+ +L++++ ++G + K + E+I D
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA--IEVIAD 124
Query: 190 VAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEFGMDLFSQDLG 249
+AL F H +IH D+KP+N+L+ + KV DFG++R + + + +G
Sbjct: 125 ACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIG 181
Query: 250 KSQELWKSQ 258
+Q L Q
Sbjct: 182 TAQYLSPEQ 190
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 27/47 (57%)
Query: 567 LSSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
+ T ++ GT Y++PE + ++D+YSLG ++ +++G P
Sbjct: 173 VXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 10/158 (6%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLGIARDG-KLLAIKRLDTFSLQTERE---FQNELQ 131
++L+ D++ VIG+G G V L + K+ A+K L F + + F E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 132 ILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVA 191
I+ SP++V L + +V EYMP L ++ S+ ++ KW++ + +V
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM-SNYDVPEKWARFY--TAEVV 183
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFG 229
AL+ +H IH D+KP N+LLD K++DFG
Sbjct: 184 LALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFG 218
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 8/149 (5%)
Query: 85 FDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLD-TFSLQTEREFQNELQILGGLRSPFLV 142
F + IGKG G VF GI R K++AIK +D + + Q E+ +L SP++
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 143 TLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCD 202
G ++ K ++ EY+ S ++L L +Q I+ ++ K L++LH
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLH---S 137
Query: 203 PPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
IH DIK +NVLL K++DFG++
Sbjct: 138 EKKIHRDIKAANVLLSEHGEVKLADFGVA 166
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 43/109 (39%), Gaps = 19/109 (17%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHL 634
GT ++APE KADI+SLG+ + + G P H PMK+ LI
Sbjct: 181 GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP-HSELHPMKV--LFLIPKNNPP 237
Query: 635 AQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTPELRPDIGETVR 683
GN + + E ++ CL K P RP E ++
Sbjct: 238 TLEGNYSKPLKEFVE----------------ACLNKEPSFRPTAKELLK 270
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 8/149 (5%)
Query: 85 FDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLD-TFSLQTEREFQNELQILGGLRSPFLV 142
F + IGKG G VF GI R K++AIK +D + + Q E+ +L SP++
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 143 TLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCD 202
G ++ K ++ EY+ S ++L L +Q I+ ++ K L++LH
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLH---S 122
Query: 203 PPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
IH DIK +NVLL K++DFG++
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVA 151
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 50/125 (40%), Gaps = 20/125 (16%)
Query: 559 SGDLFSRELSSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLAS 618
+G L ++ T + GT ++APE KADI+SLG+ + + G P H
Sbjct: 151 AGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP-HSELH 208
Query: 619 PMKLEKANLISWCRHLAQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTPELRPDI 678
PMK+ LI GN + + E ++ CL K P RP
Sbjct: 209 PMKV--LFLIPKNNPPTLEGNYSKPLKEFVE----------------ACLNKEPSFRPTA 250
Query: 679 GETVR 683
E ++
Sbjct: 251 KELLK 255
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 10/158 (6%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLGIARDG-KLLAIKRLDTFSLQTERE---FQNELQ 131
++L+ D++ VIG+G G V L + K+ A+K L F + + F E
Sbjct: 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 121
Query: 132 ILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVA 191
I+ SP++V L + +V EYMP L ++ S+ ++ KW++ + +V
Sbjct: 122 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM-SNYDVPEKWARFY--TAEVV 178
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFG 229
AL+ +H IH D+KP N+LLD K++DFG
Sbjct: 179 LALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFG 213
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 8/149 (5%)
Query: 85 FDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLD-TFSLQTEREFQNELQILGGLRSPFLV 142
F + IGKG G VF GI R K++AIK +D + + Q E+ +L SP++
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 143 TLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCD 202
G ++ K ++ EY+ S ++L L +Q I+ ++ K L++LH
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLH---S 122
Query: 203 PPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
IH DIK +NVLL K++DFG++
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVA 151
Score = 30.0 bits (66), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 43/109 (39%), Gaps = 19/109 (17%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHL 634
GT ++APE KADI+SLG+ + + G P H PMK+ LI
Sbjct: 166 GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP-HSELHPMKV--LFLIPKNNPP 222
Query: 635 AQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTPELRPDIGETVR 683
GN + + E ++ CL K P RP E ++
Sbjct: 223 TLEGNYSKPLKEFVE----------------ACLNKEPSFRPTAKELLK 255
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 20/175 (11%)
Query: 73 FTYKELKNATNDFDEA---------NVIGKGGSGTVFLG-IARDGK---LLAIKRLDT-F 118
FT+++ A +F + VIG G G V G + GK +AIK L + +
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 119 SLQTEREFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLF-SDGNLV 177
+ + R+F +E I+G P ++ L G + +++ E+M N SL L +DG
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 133
Query: 178 LKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ Q ++ +A +++L D +H D+ N+L++S+ KVSDFGLSR
Sbjct: 134 V--IQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSR 183
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 10/158 (6%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLGIARDG-KLLAIKRLDTFSLQTERE---FQNELQ 131
++L+ D++ VIG+G G V L + K+ A+K L F + + F E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 132 ILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVA 191
I+ SP++V L + +V EYMP L ++ S+ ++ KW++ + +V
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM-SNYDVPEKWARFY--TAEVV 183
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFG 229
AL+ +H IH D+KP N+LLD K++DFG
Sbjct: 184 LALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFG 218
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 9/149 (6%)
Query: 85 FDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFS-LQTEREFQNELQILGGLRSPFLV 142
FD +G+G G+V+ I ++ G+++AIK++ S LQ E E+ I+ SP +V
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQ---EIIKEISIMQQCDSPHVV 87
Query: 143 TLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCD 202
G + +V EY S+ +++ N L + I+ K LE+LHF
Sbjct: 88 KYYGSYFKNTDLWIVMEYCGAGSVSDII-RLRNKTLTEDEIATILQSTLKGLEYLHFMRK 146
Query: 203 PPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
IH DIK N+LL+++ K++DFG++
Sbjct: 147 ---IHRDIKAGNILLNTEGHAKLADFGVA 172
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 25/191 (13%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIARDGKL---LAIK-------RLDTFSLQTEREFQNELQ 131
++ ++ ++G GG V L ARD +L +A+K R +F L+ RE QN
Sbjct: 11 SDRYELGEILGFGGMSEVHL--ARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNA-- 66
Query: 132 ILGGLRSPFLVTLLGYCMERNKR----ILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEII 187
L P +V + +V EY+ +L++++ ++G + K + E+I
Sbjct: 67 --AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA--IEVI 122
Query: 188 MDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEFGMDLFSQD 247
D +AL F H +IH D+KP+N+++ + KV DFG++R + + +
Sbjct: 123 ADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 248 LGKSQELWKSQ 258
+G +Q L Q
Sbjct: 180 IGTAQYLSPEQ 190
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 28/47 (59%)
Query: 567 LSSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
++ T ++ GT Y++PE + ++D+YSLG ++ +++G P
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 21/189 (11%)
Query: 82 TNDFDEANVIGKGGSGTVFLGI-ARDGKLLAIK-------RLDTFSLQTEREFQNELQIL 133
++ ++ ++G GG V L RD + +A+K R +F L+ RE QN
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNA---- 66
Query: 134 GGLRSPFLVTLLGYCMERNKR----ILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMD 189
L P +V + +V EY+ +L++++ ++G + K + E+I D
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA--IEVIAD 124
Query: 190 VAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEFGMDLFSQDLG 249
+AL F H +IH D+KP+N+++ + KV DFG++R + + + +G
Sbjct: 125 ACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 250 KSQELWKSQ 258
+Q L Q
Sbjct: 182 TAQYLSPEQ 190
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 28/47 (59%)
Query: 567 LSSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
++ T ++ GT Y++PE + ++D+YSLG ++ +++G P
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 21/189 (11%)
Query: 82 TNDFDEANVIGKGGSGTVFLGI-ARDGKLLAIK-------RLDTFSLQTEREFQNELQIL 133
++ ++ ++G GG V L RD + +A+K R +F L+ RE QN
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNA---- 66
Query: 134 GGLRSPFLVTLLGYCMERNKR----ILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMD 189
L P +V + +V EY+ +L++++ ++G + K + E+I D
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA--IEVIAD 124
Query: 190 VAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEFGMDLFSQDLG 249
+AL F H +IH D+KP+N+++ + KV DFG++R + + + +G
Sbjct: 125 ACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 250 KSQELWKSQ 258
+Q L Q
Sbjct: 182 TAQYLSPEQ 190
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 28/47 (59%)
Query: 567 LSSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
++ T ++ GT Y++PE + ++D+YSLG ++ +++G P
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 85/175 (48%), Gaps = 20/175 (11%)
Query: 74 TYKELKNATNDFDEA---------NVIGKGGSGTVFLG-IARDGKL---LAIKRLDT-FS 119
TY++ A ++F + VIG G G V G + GK +AIK L ++
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 120 LQTEREFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLF-SDGNLVL 178
+ R+F E I+G P ++ L G + ++V EYM N SL L +DG +
Sbjct: 64 EKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV 123
Query: 179 KWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
Q ++ ++ +++L D +H D+ N+L++S+ KVSDFGLSR+
Sbjct: 124 --IQLVGMLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 173
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 8/149 (5%)
Query: 85 FDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLD-TFSLQTEREFQNELQILGGLRSPFLV 142
F + IGKG G VF GI R K++AIK +D + + Q E+ +L SP++
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 143 TLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCD 202
G ++ K ++ EY+ S ++L L +Q I+ ++ K L++LH
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLH---S 142
Query: 203 PPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
IH DIK +NVLL K++DFG++
Sbjct: 143 EKKIHRDIKAANVLLSEHGEVKLADFGVA 171
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 50/125 (40%), Gaps = 20/125 (16%)
Query: 559 SGDLFSRELSSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLAS 618
+G L ++ T + GT ++APE KADI+SLG+ + + G P H
Sbjct: 171 AGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP-HSELH 228
Query: 619 PMKLEKANLISWCRHLAQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTPELRPDI 678
PMK+ LI GN + + E ++ CL K P RP
Sbjct: 229 PMKV--LFLIPKNNPPTLEGNYSKPLKEFVE----------------ACLNKEPSFRPTA 270
Query: 679 GETVR 683
E ++
Sbjct: 271 KELLK 275
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 25/191 (13%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIARDGKL---LAIKRL-------DTFSLQTEREFQNELQ 131
++ ++ ++G GG V L ARD +L +A+K L +F L+ RE QN
Sbjct: 28 SDRYELGEILGFGGMSEVHL--ARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNA-- 83
Query: 132 ILGGLRSPFLVTLLGYCMERNKR----ILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEII 187
L P +V + +V EY+ +L++++ ++G + K + E+I
Sbjct: 84 --AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA--IEVI 139
Query: 188 MDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEFGMDLFSQD 247
D +AL F H +IH D+KP+N+++ + KV DFG++R + + +
Sbjct: 140 ADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 196
Query: 248 LGKSQELWKSQ 258
+G +Q L Q
Sbjct: 197 IGTAQYLSPEQ 207
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 28/47 (59%)
Query: 567 LSSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
++ T ++ GT Y++PE + ++D+YSLG ++ +++G P
Sbjct: 190 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 236
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 13/184 (7%)
Query: 56 RSRTIPFDSNAPLKLQRFTYKELKNATNDFDEANVIGKGGSGTVFLG-IARDGK---LLA 111
R+ PF P + R KE+ + ++ VIG G G V G + GK +A
Sbjct: 4 RTFVDPFTFEDPNQAVREFAKEIDASCIKIEK--VIGVGEFGEVCSGRLKVPGKREICVA 61
Query: 112 IKRLDT-FSLQTEREFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEML 170
IK L ++ + R+F +E I+G P ++ L G + +++ EYM N SL L
Sbjct: 62 IKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL 121
Query: 171 F-SDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFG 229
+DG + Q ++ + +++L D +H D+ N+L++S+ KVSDFG
Sbjct: 122 RKNDGRFTV--IQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFG 176
Query: 230 LSRI 233
+SR+
Sbjct: 177 MSRV 180
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 10/168 (5%)
Query: 75 YKELKNATNDFDEANVIGKGGSGTVFLG-IARDGKLLAIKRLDTFSLQ-TEREFQNELQI 132
+K+ ++ + +D +V+G G V L R KL+AIK + +L+ E +NE+ +
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 133 LGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
L ++ P +V L L+ + + L + + G + + R +I V
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR--LIFQVLD 127
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVL---LDSDCRGKVSDFGLSRIKVEG 237
A+++LH D ++H D+KP N+L LD D + +SDFGLS+++ G
Sbjct: 128 AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG 172
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 10/168 (5%)
Query: 75 YKELKNATNDFDEANVIGKGGSGTVFLG-IARDGKLLAIKRLDTFSLQ-TEREFQNELQI 132
+K+ ++ + +D +V+G G V L R KL+AIK + +L+ E +NE+ +
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 133 LGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
L ++ P +V L L+ + + L + + G + + R +I V
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR--LIFQVLD 127
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVL---LDSDCRGKVSDFGLSRIKVEG 237
A+++LH D ++H D+KP N+L LD D + +SDFGLS+++ G
Sbjct: 128 AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG 172
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 10/168 (5%)
Query: 75 YKELKNATNDFDEANVIGKGGSGTVFLG-IARDGKLLAIKRLDTFSLQ-TEREFQNELQI 132
+K+ ++ + +D +V+G G V L R KL+AIK + +L+ E +NE+ +
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAV 69
Query: 133 LGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
L ++ P +V L L+ + + L + + G + + R +I V
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR--LIFQVLD 127
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVL---LDSDCRGKVSDFGLSRIKVEG 237
A+++LH D ++H D+KP N+L LD D + +SDFGLS+++ G
Sbjct: 128 AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG 172
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 13/184 (7%)
Query: 56 RSRTIPFDSNAPLKLQRFTYKELKNATNDFDEANVIGKGGSGTVFLG----IARDGKLLA 111
R+ P P + KEL D+ V+G G G V G ++ +A
Sbjct: 20 RTYVDPHTYEDPTQTVHEFAKELDATNISIDK--VVGAGEFGEVCSGRLKLPSKKEISVA 77
Query: 112 IKRLDT-FSLQTEREFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEML 170
IK L ++ + R+F E I+G P ++ L G + ++V EYM N SL L
Sbjct: 78 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
Query: 171 FS-DGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFG 229
D + Q ++ +A +++L D +H D+ N+L++S+ KVSDFG
Sbjct: 138 RKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFG 192
Query: 230 LSRI 233
LSR+
Sbjct: 193 LSRV 196
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 13/184 (7%)
Query: 56 RSRTIPFDSNAPLKLQRFTYKELKNATNDFDEANVIGKGGSGTVFLG----IARDGKLLA 111
R+ P P + KEL D+ V+G G G V G ++ +A
Sbjct: 18 RTYVDPHTYEDPTQTVHEFAKELDATNISIDK--VVGAGEFGEVCSGRLKLPSKKEISVA 75
Query: 112 IKRLDT-FSLQTEREFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEML 170
IK L ++ + R+F E I+G P ++ L G + ++V EYM N SL L
Sbjct: 76 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 135
Query: 171 FS-DGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFG 229
D + Q ++ +A +++L D +H D+ N+L++S+ KVSDFG
Sbjct: 136 RKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFG 190
Query: 230 LSRI 233
LSR+
Sbjct: 191 LSRV 194
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 91 IGKGGSGTVFLGIA-----RDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLL 145
+GKG G+V + G+++A+K+L + + R+F+ E++IL L+ +V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 146 GYCMERNKR--ILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
G C +R L+ EY+P SL++ L + + + + + K +E+L
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERI-DHIKLLQYTSQICKGMEYL---GTK 136
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH D+ N+L++++ R K+ DFGL+++
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKV 166
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 10/168 (5%)
Query: 75 YKELKNATNDFDEANVIGKGGSGTVFLG-IARDGKLLAIKRLDTFSLQ-TEREFQNELQI 132
+K+ ++ + +D +V+G G V L R KL+AIK + +L+ E +NE+ +
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 133 LGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
L ++ P +V L L+ + + L + + G + + R +I V
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR--LIFQVLD 127
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVL---LDSDCRGKVSDFGLSRIKVEG 237
A+++LH D ++H D+KP N+L LD D + +SDFGLS+++ G
Sbjct: 128 AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG 172
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 13/184 (7%)
Query: 56 RSRTIPFDSNAPLKLQRFTYKELKNATNDFDEANVIGKGGSGTVFLG----IARDGKLLA 111
R+ P P + KEL D+ V+G G G V G ++ +A
Sbjct: 20 RTYVDPHTFEDPTQTVHEFAKELDATNISIDK--VVGAGEFGEVCSGRLKLPSKKEISVA 77
Query: 112 IKRLDT-FSLQTEREFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEML 170
IK L ++ + R+F E I+G P ++ L G + ++V EYM N SL L
Sbjct: 78 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
Query: 171 FS-DGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFG 229
D + Q ++ +A +++L D +H D+ N+L++S+ KVSDFG
Sbjct: 138 RKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFG 192
Query: 230 LSRI 233
LSR+
Sbjct: 193 LSRV 196
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 37/179 (20%)
Query: 91 IGKGGSGTVFLGIA------RDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTL 144
+G+G G VFL +D L+A+K L S ++FQ E ++L L+ +V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 145 LGYCMERNKRILVYEYMPNKSLQEMLFS---DGNLV----------LKWSQRFEIIMDVA 191
G C E ++V+EYM + L L S D L+ L Q + VA
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 192 KALEF---LHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEFGMDLFSQD 247
+ + LHF +H D+ N L+ K+ DFG+SR D++S D
Sbjct: 146 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSR---------DIYSTD 189
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLG----IARDGKLLAIKRLDT-FSLQTEREFQNEL 130
KEL D+ V+G G G V G ++ +AIK L ++ + R+F E
Sbjct: 11 KELDATNISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 68
Query: 131 QILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFS-DGNLVLKWSQRFEIIMD 189
I+G P ++ L G + ++V EYM N SL L D + Q ++
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRG 126
Query: 190 VAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+A +++L D +H D+ N+L++S+ KVSDFGLSR+
Sbjct: 127 IASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRV 167
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 37/179 (20%)
Query: 91 IGKGGSGTVFLGIA------RDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTL 144
+G+G G VFL +D L+A+K L S ++FQ E ++L L+ +V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 145 LGYCMERNKRILVYEYMPNKSLQEMLFS---DGNLV----------LKWSQRFEIIMDVA 191
G C E ++V+EYM + L L S D L+ L Q + VA
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 192 KALEF---LHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEFGMDLFSQD 247
+ + LHF +H D+ N L+ K+ DFG+SR D++S D
Sbjct: 169 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSR---------DIYSTD 212
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 13/184 (7%)
Query: 56 RSRTIPFDSNAPLKLQRFTYKELKNATNDFDEANVIGKGGSGTVFLG----IARDGKLLA 111
R+ P P + KEL D+ V+G G G V G ++ +A
Sbjct: 20 RTFVDPHTYEDPTQTVHEFAKELDATNISIDK--VVGAGEFGEVCSGRLKLPSKKEISVA 77
Query: 112 IKRLDT-FSLQTEREFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEML 170
IK L ++ + R+F E I+G P ++ L G + ++V EYM N SL L
Sbjct: 78 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
Query: 171 FS-DGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFG 229
D + Q ++ +A +++L D +H D+ N+L++S+ KVSDFG
Sbjct: 138 RKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFG 192
Query: 230 LSRI 233
LSR+
Sbjct: 193 LSRV 196
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLG----IARDGKLLAIKRLDT-FSLQTEREFQNEL 130
KEL D+ V+G G G V G ++ +AIK L ++ + R+F E
Sbjct: 28 KELDATNISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 85
Query: 131 QILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFS-DGNLVLKWSQRFEIIMD 189
I+G P ++ L G + ++V EYM N SL L D + Q ++
Sbjct: 86 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRG 143
Query: 190 VAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+A +++L D +H D+ N+L++S+ KVSDFGLSR+
Sbjct: 144 IASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRV 184
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLG----IARDGKLLAIKRLDT-FSLQTEREFQNEL 130
KEL D+ V+G G G V G ++ +AIK L ++ + R+F E
Sbjct: 40 KELDATNISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 131 QILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFS-DGNLVLKWSQRFEIIMD 189
I+G P ++ L G + ++V EYM N SL L D + Q ++
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRG 155
Query: 190 VAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+A +++L D +H D+ N+L++S+ KVSDFGLSR+
Sbjct: 156 IASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRV 196
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 37/179 (20%)
Query: 91 IGKGGSGTVFLGIA------RDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTL 144
+G+G G VFL +D L+A+K L S ++FQ E ++L L+ +V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 145 LGYCMERNKRILVYEYMPNKSLQEMLFS---DGNLV----------LKWSQRFEIIMDVA 191
G C E ++V+EYM + L L S D L+ L Q + VA
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 192 KALEF---LHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEFGMDLFSQD 247
+ + LHF +H D+ N L+ K+ DFG+SR D++S D
Sbjct: 140 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSR---------DIYSTD 183
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLG----IARDGKLLAIKRLDT-FSLQTEREFQNEL 130
KEL D+ V+G G G V G ++ +AIK L ++ + R+F E
Sbjct: 40 KELDATNISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 131 QILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFS-DGNLVLKWSQRFEIIMD 189
I+G P ++ L G + ++V EYM N SL L D + Q ++
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRG 155
Query: 190 VAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+A +++L D +H D+ N+L++S+ KVSDFGLSR+
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 196
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 78/158 (49%), Gaps = 19/158 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARDGK---LLAIKRLDTFSLQTERE-----FQNELQILG 134
+DF+ +GKG G V+L AR+ K ++A+K L F Q E+E + E++I
Sbjct: 23 DDFEIGRPLGKGKFGNVYL--AREKKSHFIVALKVL--FKSQIEKEGVEHQLRREIEIQA 78
Query: 135 GLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMD-VAKA 193
L P ++ L Y +R + L+ EY P L + L QR IM+ +A A
Sbjct: 79 HLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFD---EQRTATIMEELADA 135
Query: 194 LEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
L + H VIH DIKP N+LL K++DFG S
Sbjct: 136 LMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWS 170
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 10/160 (6%)
Query: 84 DFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQ---TEREFQNELQILGGLRSP 139
++ +G+G G V L G+ +A+K ++ L + + E+ L LR P
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 140 FLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHF 199
++ L +++ I+V EY N+ ++ D + + ++RF + A+E+ H
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD-KMSEQEARRF--FQQIISAVEYCH- 130
Query: 200 GCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
++H D+KP N+LLD K++DFGLS I +G F
Sbjct: 131 --RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 168
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 10/160 (6%)
Query: 84 DFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQ---TEREFQNELQILGGLRSP 139
++ +G+G G V L G+ +A+K ++ L + + E+ L LR P
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 140 FLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHF 199
++ L +++ I+V EY N+ ++ D + + ++RF + A+E+ H
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD-KMSEQEARRF--FQQIISAVEYCH- 129
Query: 200 GCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
++H D+KP N+LLD K++DFGLS I +G F
Sbjct: 130 --RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 81/176 (46%), Gaps = 11/176 (6%)
Query: 90 VIGKGGSGTVFLG-IARDGK---LLAIKRLDT-FSLQTEREFQNELQILGGLRSPFLVTL 144
VIG G G V G + GK +AIK L ++ + REF +E I+G P ++ L
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 145 LGYCMERNKRILVYEYMPNKSLQEML-FSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
G +++ E+M N +L L +DG + Q ++ +A + +L +
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV--IQLVGMLRGIASGMRYL---AEM 135
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEFGMDLFSQDLGKSQELWKSQE 259
+H D+ N+L++S+ KVSDFGLSR E S GK W + E
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPE 191
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G+G G V++G +AIK L ++ E F E Q++ LR LV L E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I V EYM SL + L + L+ Q ++ +A + ++ +H D+
Sbjct: 251 EPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 306
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+ +N+L+ + KV+DFGL+R+ + E+
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEY 335
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G+G G V++G +AIK L ++ E F E Q++ LR LV L E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I V EYM SL + L + L+ Q ++ +A + ++ +H D+
Sbjct: 251 EPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 306
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+ +N+L+ + KV+DFGL+R+ + E+
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEY 335
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
Query: 91 IGKGGSGTVFLGIA-----RDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLL 145
+GKG G+V + G+++A+K+L + + R+F+ E++IL L+ +V
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 146 GYCMERNKR--ILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
G C +R L+ EY+P SL++ L + + + + K +E+L
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIKLLQYTSQICKGMEYL---GTK 132
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH D+ N+L++++ R K+ DFGL+++
Sbjct: 133 RYIHRDLATRNILVENENRVKIGDFGLTKV 162
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 11/149 (7%)
Query: 90 VIGKGGSGTVFLG-IARDGK---LLAIKRLDT-FSLQTEREFQNELQILGGLRSPFLVTL 144
VIG G G V G + GK +AIK L ++ + REF +E I+G P ++ L
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 145 LGYCMERNKRILVYEYMPNKSLQEML-FSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
G +++ E+M N +L L +DG + Q ++ +A + +L +
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV--IQLVGMLRGIASGMRYL---AEM 137
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+H D+ N+L++S+ KVSDFGLSR
Sbjct: 138 SYVHRDLAARNILVNSNLVCKVSDFGLSR 166
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 10/160 (6%)
Query: 84 DFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQ---TEREFQNELQILGGLRSP 139
++ +G+G G V L G+ +A+K ++ L + + E+ L LR P
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 140 FLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHF 199
++ L +++ I+V EY N+ ++ D + + ++RF + A+E+ H
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD-KMSEQEARRF--FQQIISAVEYCH- 120
Query: 200 GCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
++H D+KP N+LLD K++DFGLS I +G F
Sbjct: 121 --RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 158
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 8/163 (4%)
Query: 71 QRFTYKELKNATNDFDEANVIGKGGSGTVFLGIARDGKLLAIKRLDTFSLQ--TEREFQN 128
Q+ ELK+ +DF++ + +G G G VF + L+ ++L ++ +
Sbjct: 58 QKQKVGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR 115
Query: 129 ELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM 188
ELQ+L SP++V G + + E+M SL ++L G + + + I
Sbjct: 116 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA- 174
Query: 189 DVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
V K L +L ++H D+KPSN+L++S K+ DFG+S
Sbjct: 175 -VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 214
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
Query: 91 IGKGGSGTVFLGIA-----RDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLL 145
+GKG G+V + G+++A+K+L + + R+F+ E++IL L+ +V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 146 GYCMERNKR--ILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
G C +R L+ EY+P SL++ L + + + + K +E+L
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIKLLQYTSQICKGMEYL---GTK 136
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH D+ N+L++++ R K+ DFGL+++
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKV 166
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
Query: 91 IGKGGSGTVFLGIA-----RDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLL 145
+GKG G+V + G+++A+K+L + + R+F+ E++IL L+ +V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 146 GYCMERNKR--ILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
G C +R L+ EY+P SL++ L + + + + K +E+L
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIKLLQYTSQICKGMEYL---GTK 133
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH D+ N+L++++ R K+ DFGL+++
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKV 163
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
Query: 91 IGKGGSGTVFLGIA-----RDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLL 145
+GKG G+V + G+++A+K+L + + R+F+ E++IL L+ +V
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 146 GYCMERNKR--ILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
G C +R L+ EY+P SL++ L + + + + K +E+L
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIKLLQYTSQICKGMEYL---GTK 131
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH D+ N+L++++ R K+ DFGL+++
Sbjct: 132 RYIHRDLATRNILVENENRVKIGDFGLTKV 161
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
Query: 91 IGKGGSGTVFLGIA-----RDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLL 145
+GKG G+V + G+++A+K+L + + R+F+ E++IL L+ +V
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 146 GYCMERNKR--ILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
G C +R L+ EY+P SL++ L + + + + K +E+L
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIKLLQYTSQICKGMEYL---GTK 138
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH D+ N+L++++ R K+ DFGL+++
Sbjct: 139 RYIHRDLATRNILVENENRVKIGDFGLTKV 168
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
Query: 91 IGKGGSGTVFLGIA-----RDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLL 145
+GKG G+V + G+++A+K+L + + R+F+ E++IL L+ +V
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 146 GYCMERNKR--ILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
G C +R L+ EY+P SL++ L + + + + K +E+L
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIKLLQYTSQICKGMEYL---GTK 140
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH D+ N+L++++ R K+ DFGL+++
Sbjct: 141 RYIHRDLATRNILVENENRVKIGDFGLTKV 170
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 10/160 (6%)
Query: 84 DFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQ---TEREFQNELQILGGLRSP 139
++ +G+G G V L G+ +A+K ++ L + + E+ L LR P
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 140 FLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHF 199
++ L +++ I+V EY N+ ++ D + + ++RF + A+E+ H
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD-KMSEQEARRF--FQQIISAVEYCH- 124
Query: 200 GCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
++H D+KP N+LLD K++DFGLS I +G F
Sbjct: 125 --RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 162
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
Query: 91 IGKGGSGTVFLGIA-----RDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLL 145
+GKG G+V + G+++A+K+L + + R+F+ E++IL L+ +V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 146 GYCMERNKR--ILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
G C +R L+ EY+P SL++ L + + + + K +E+L
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIKLLQYTSQICKGMEYL---GTK 133
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH D+ N+L++++ R K+ DFGL+++
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKV 163
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G+G G V++G +AIK L ++ E F E Q++ LR LV L E
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I V EYM SL + L + L+ Q ++ +A + ++ +H D+
Sbjct: 334 EPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 389
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+ +N+L+ + KV+DFGL+R+ + E+
Sbjct: 390 RAANILVGENLVCKVADFGLARLIEDNEY 418
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 76/150 (50%), Gaps = 11/150 (7%)
Query: 90 VIGKGGSGTVFLG-IARDGK---LLAIKRLDT-FSLQTEREFQNELQILGGLRSPFLVTL 144
VIG G G V G + GK +AIK L ++ + R+F +E I+G P ++ L
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 80
Query: 145 LGYCMERNKRILVYEYMPNKSLQEMLF-SDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
G + +++ EYM N SL L +DG + Q ++ + +++L D
Sbjct: 81 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYLS---DM 135
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+H D+ N+L++S+ KVSDFG+SR+
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGMSRV 165
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
Query: 91 IGKGGSGTVFLGIA-----RDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLL 145
+GKG G+V + G+++A+K+L + + R+F+ E++IL L+ +V
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 146 GYCMERNKR--ILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
G C +R L+ EY+P SL++ L + + + + K +E+L
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIKLLQYTSQICKGMEYL---GTK 164
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH D+ N+L++++ R K+ DFGL+++
Sbjct: 165 RYIHRDLATRNILVENENRVKIGDFGLTKV 194
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
Query: 91 IGKGGSGTVFLGIA-----RDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLL 145
+GKG G+V + G+++A+K+L + + R+F+ E++IL L+ +V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 146 GYCMERNKR--ILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
G C +R L+ E++P SL+E L + + + + K +E+L
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERI-DHIKLLQYTSQICKGMEYL---GTK 136
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH D+ N+L++++ R K+ DFGL+++
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKV 166
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
Query: 91 IGKGGSGTVFLGIA-----RDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLL 145
+GKG G+V + G+++A+K+L + + R+F+ E++IL L+ +V
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 146 GYCMERNKR--ILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
G C +R L+ EY+P SL++ L + + + + K +E+L
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIKLLQYTSQICKGMEYL---GTK 139
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH D+ N+L++++ R K+ DFGL+++
Sbjct: 140 RYIHRDLATRNILVENENRVKIGDFGLTKV 169
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 39/219 (17%)
Query: 82 TNDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQ---NELQILGGLR 137
+DF+E V+G+G G V A D + AIK++ TE + +E+ +L L
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR----HTEEKLSTILSEVMLLASLN 60
Query: 138 SPFLVTLLGYCMERNKRI-------------LVYEYMPNKSLQEMLFSDGNLVLKWSQRF 184
++V +ER + + EY N++L +++ S+ NL + + +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSE-NLNQQRDEYW 119
Query: 185 EIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEFGMDLF 244
+ + +AL ++H +IH D+KP N+ +D K+ DFGL++ +D+
Sbjct: 120 RLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAK---NVHRSLDIL 173
Query: 245 SQDLGKSQELWKSQELSGNLATATETPAISTPVDSAHEV 283
D SQ L G ++ T AI T + A EV
Sbjct: 174 KLD---------SQNLPG--SSDNLTSAIGTAMYVATEV 201
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 571 TSMRGTLCYVAPEY-GGCGYLMEKADIYSLGVLILVIV 607
TS GT YVA E G G+ EK D+YSLG++ ++
Sbjct: 188 TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
Query: 91 IGKGGSGTVFLGIA-----RDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLL 145
+GKG G+V + G+++A+K+L + + R+F+ E++IL L+ +V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 146 GYCMERNKR--ILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
G C +R L+ EY+P SL++ L + + + + K +E+L
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIKLLQYTSQICKGMEYL---GTK 133
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH D+ N+L++++ R K+ DFGL+++
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKV 163
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
Query: 91 IGKGGSGTVFLGIA-----RDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLL 145
+GKG G+V + G+++A+K+L + + R+F+ E++IL L+ +V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 146 GYCMERNKR--ILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
G C +R L+ EY+P SL++ L + + + + K +E+L
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIKLLQYTSQICKGMEYL---GTK 151
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH D+ N+L++++ R K+ DFGL+++
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKV 181
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLG----IARDGKLLAIKRLDT-FSLQTEREFQNEL 130
KEL D+ V+G G G V G ++ +AIK L ++ + R+F E
Sbjct: 40 KELDATNISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 131 QILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFS-DGNLVLKWSQRFEIIMD 189
I+G P ++ L G + ++V EYM N SL L D + Q ++
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRG 155
Query: 190 VAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+A +++L D +H D+ N+L++S+ KVSDFGL+R+
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARV 196
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G+G G V++G +AIK L ++ E F E Q++ LR LV L E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I V EYM SL + L + L+ Q ++ +A + ++ +H D+
Sbjct: 251 EPIYI-VGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 306
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+ +N+L+ + KV+DFGL+R+ + E+
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEY 335
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
Query: 91 IGKGGSGTVFLGIA-----RDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLL 145
+GKG G+V + G+++A+K+L + + R+F+ E++IL L+ +V
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 146 GYCMERNKR--ILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
G C +R L+ EY+P SL++ L + + + + K +E+L
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIKLLQYTSQICKGMEYL---GTK 137
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH D+ N+L++++ R K+ DFGL+++
Sbjct: 138 RYIHRDLATRNILVENENRVKIGDFGLTKV 167
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 76/150 (50%), Gaps = 11/150 (7%)
Query: 90 VIGKGGSGTVFLG-IARDGK---LLAIKRLDT-FSLQTEREFQNELQILGGLRSPFLVTL 144
VIG G G V G + GK +AIK L ++ + R+F +E I+G P ++ L
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 74
Query: 145 LGYCMERNKRILVYEYMPNKSLQEMLF-SDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
G + +++ EYM N SL L +DG + Q ++ + +++L D
Sbjct: 75 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYLS---DM 129
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+H D+ N+L++S+ KVSDFG+SR+
Sbjct: 130 SYVHRDLAARNILVNSNLVCKVSDFGMSRV 159
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 81/175 (46%), Gaps = 20/175 (11%)
Query: 74 TYKELKNATNDFDEA---------NVIGKGGSGTVFLG-IARDGK---LLAIKRLDT-FS 119
TY++ A + F + VIG G G V G + GK +AIK L ++
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 120 LQTEREFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFS-DGNLVL 178
+ R+F E I+G P +V L G ++V E+M N +L L DG +
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV 144
Query: 179 KWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
Q ++ +A + +L D +H D+ N+L++S+ KVSDFGLSR+
Sbjct: 145 --IQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRV 194
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
Query: 91 IGKGGSGTVFLGIA-----RDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLL 145
+GKG G+V + G+++A+K+L + + R+F+ E++IL L+ +V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 146 GYCMERNKR--ILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
G C +R L+ EY+P SL++ L + + + + K +E+L
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIKLLQYTSQICKGMEYL---GTK 151
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH D+ N+L++++ R K+ DFGL+++
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKV 181
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 9/156 (5%)
Query: 88 ANVIGKGGSGTVFLGIAR-DGKLLAIKRLD---TFSLQTEREFQNELQILGGLRSPFLVT 143
+ +G G G V +G + G +A+K L+ SL + + E+Q L R P ++
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
L +V EY+ L + + G + ++R + + A+++ H
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARR--LFQQILSAVDYCHRHM-- 131
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
V+H D+KP NVLLD+ K++DFGLS + +GEF
Sbjct: 132 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 166
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 88 ANVIGKGGSGTVFLGIAR-DGKLLAIKRLD---TFSLQTEREFQNELQILGGLRSPFLVT 143
+ +G G G V +G + G +A+K L+ SL + + E+Q L R P ++
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
L +V EY+ L + + G + ++R + + A+++ H
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARR--LFQQILSAVDYCHRHM-- 131
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEFGMD 242
V+H D+KP NVLLD+ K++DFGLS + +GEF D
Sbjct: 132 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRD 169
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 11/149 (7%)
Query: 90 VIGKGGSGTVFLG-IARDGK---LLAIKRLDT-FSLQTEREFQNELQILGGLRSPFLVTL 144
VIG G G V G + GK +AIK L + ++ + R+F +E I+G P ++ L
Sbjct: 14 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 73
Query: 145 LGYCMERNKRILVYEYMPNKSLQEMLF-SDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
G + +++ E+M N SL L +DG + Q ++ +A +++L D
Sbjct: 74 EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIAAGMKYL---ADM 128
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+H + N+L++S+ KVSDFGLSR
Sbjct: 129 NYVHRALAARNILVNSNLVCKVSDFGLSR 157
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G+G G V++G +AIK L ++ E F E Q++ LR LV L E
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I V EYM SL + L + L+ Q ++ +A + ++ +H D+
Sbjct: 78 EPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 133
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+ +N+L+ + KV+DFGL+R+ + E+
Sbjct: 134 RAANILVGENLVCKVADFGLARLIEDNEY 162
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G+G G V++G +AIK L ++ E F E Q++ LR LV L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I++ EYM SL + L + L+ Q ++ +A + ++ +H D+
Sbjct: 85 EPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+ +N+L+ + KV+DFGL+R+ + E+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEY 169
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 83/182 (45%), Gaps = 30/182 (16%)
Query: 68 LKLQRFTYKELKNATNDFDEANVIGKGGSGTVFL----GIARDGKLLAIKRLDTFSL--- 120
L+ T K +F+ V+G G G VFL GKL A+K L ++
Sbjct: 39 LRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQK 98
Query: 121 -QTEREFQNELQILGGLR-SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVL 178
+T + E Q+L +R SPFLVTL K L+ +Y+ + G L
Sbjct: 99 AKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYI----------NGGELFT 148
Query: 179 KWSQR-----FEI---IMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGL 230
SQR E+ + ++ ALE LH +I+ DIK N+LLDS+ ++DFGL
Sbjct: 149 HLSQRERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGL 205
Query: 231 SR 232
S+
Sbjct: 206 SK 207
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 8/163 (4%)
Query: 71 QRFTYKELKNATNDFDEANVIGKGGSGTVFLGIARDGKLLAIKRLDTFSLQ--TEREFQN 128
Q+ ELK+ +DF++ + +G G G VF + L+ ++L ++ +
Sbjct: 23 QKQKVGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR 80
Query: 129 ELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM 188
ELQ+L SP++V G + + E+M SL ++L G + + + I
Sbjct: 81 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA- 139
Query: 189 DVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
V K L +L ++H D+KPSN+L++S K+ DFG+S
Sbjct: 140 -VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 179
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 13/164 (7%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLG----IARDGKLLAIKRLDT-FSLQTEREFQNEL 130
KEL D+ V+G G G V G ++ +AIK L ++ + R+F E
Sbjct: 40 KELDATNISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 131 QILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFS-DGNLVLKWSQRFEIIMD 189
I+G P ++ L G + ++V EYM N SL L D + Q ++
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRG 155
Query: 190 VAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+A +++L D +H D+ N+L++S+ KVSDFGL R+
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRV 196
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G+G G V++G +AIK L ++ E F E Q++ LR LV L E
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I V EYM SL + L + L+ Q ++ +A + ++ +H D+
Sbjct: 76 EPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 131
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+ +N+L+ + KV+DFGL+R+ + E+
Sbjct: 132 RAANILVGENLVCKVADFGLARLIEDNEY 160
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 24/178 (13%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARD---GKLLAIKRL------DTFSLQTEREFQNELQ 131
AT+ ++ IG G GTV+ ARD G +A+K + + + T RE L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYK--ARDPHSGHFVALKSVRVPNGEEGLPISTVREVAL-LR 58
Query: 132 ILGGLRSPFLVTLLGYCMERN-----KRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEI 186
L P +V L+ C K LV+E++ ++ L+ L L ++
Sbjct: 59 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDL 117
Query: 187 IMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEFGMDLF 244
+ + L+FLH C ++H D+KP N+L+ S K++DFGL+RI + M LF
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALF 169
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 21/167 (12%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARD---GKLLAIKRL------DTFSLQTEREFQNELQ 131
AT+ ++ IG G GTV+ ARD G +A+K + + + T RE L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYK--ARDPHSGHFVALKSVRVPNGEEGLPISTVREVAL-LR 58
Query: 132 ILGGLRSPFLVTLLGYCMERN-----KRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEI 186
L P +V L+ C K LV+E++ ++ L+ L L ++
Sbjct: 59 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDL 117
Query: 187 IMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+ + L+FLH C ++H D+KP N+L+ S K++DFGL+RI
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 21/167 (12%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARD---GKLLAIKRL------DTFSLQTEREFQNELQ 131
AT+ ++ IG G GTV+ ARD G +A+K + + + T RE L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYK--ARDPHSGHFVALKSVRVPNGEEGLPISTVREVAL-LR 58
Query: 132 ILGGLRSPFLVTLLGYCMERN-----KRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEI 186
L P +V L+ C K LV+E++ ++ L+ L L ++
Sbjct: 59 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDL 117
Query: 187 IMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+ + L+FLH C ++H D+KP N+L+ S K++DFGL+RI
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 85/171 (49%), Gaps = 21/171 (12%)
Query: 79 KNATNDFDEANVIGKGGSGTVFL--GIAR--DGKLLAIKRLDTFSLQTEREFQNELQ--I 132
K + F+ V+G+G G VFL + R G L A+K L +L+ + +++ I
Sbjct: 24 KADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDI 83
Query: 133 LGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSL-----QEMLFSDGNLVLKWSQRFEII 187
L + PF+V L K L+ +++ L +E++F++ ++ +
Sbjct: 84 LADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-------YL 136
Query: 188 MDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGE 238
++A L+ LH +I+ D+KP N+LLD + K++DFGLS+ ++ E
Sbjct: 137 AELALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHE 184
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 8/157 (5%)
Query: 77 ELKNATNDFDEANVIGKGGSGTVFLGIARDGKLLAIKRLDTFSLQ--TEREFQNELQILG 134
ELK+ +DF++ + +G G G VF + L+ ++L ++ + ELQ+L
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 135 GLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKAL 194
SP++V G + + E+M SL ++L G + + + I V K L
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGL 117
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
+L ++H D+KPSN+L++S K+ DFG+S
Sbjct: 118 TYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 21/164 (12%)
Query: 79 KNATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLD---TFSLQTEREFQNELQILG 134
K + DF +G G G V L +R +G+ A+K L L+ +E +L
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 135 GLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFE------IIM 188
+ PF++ + G + + ++ +Y+ L FS +L+ SQRF
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGEL----FS----LLRKSQRFPNPVAKFYAA 113
Query: 189 DVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+V ALE+LH +I+ D+KP N+LLD + K++DFG ++
Sbjct: 114 EVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAK 154
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 8/163 (4%)
Query: 71 QRFTYKELKNATNDFDEANVIGKGGSGTVFLGIARDGKLLAIKRLDTFSLQ--TEREFQN 128
Q+ ELK+ +DF++ + +G G G VF + L+ ++L ++ +
Sbjct: 15 QKQKVGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR 72
Query: 129 ELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM 188
ELQ+L SP++V G + + E+M SL ++L G + + + I
Sbjct: 73 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI-- 130
Query: 189 DVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
V K L +L ++H D+KPSN+L++S K+ DFG+S
Sbjct: 131 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 171
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 7/141 (4%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
IG+G SGTV+ + G+ +AI++++ + NE+ ++ ++P +V L +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 150 ERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGD 209
++ +V EY+ SL +++ + Q + + +ALEFLH VIH D
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRD 141
Query: 210 IKPSNVLLDSDCRGKVSDFGL 230
IK N+LL D K++DFG
Sbjct: 142 IKSDNILLGMDGSVKLTDFGF 162
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 563 FSRELSSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRP 612
+ E S + M GT ++APE K DI+SLG++ + ++ G P
Sbjct: 166 ITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G+G G V++G +AIK L ++ E F E Q++ LR LV L E
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I V EYM SL + L + L+ Q ++ +A + ++ +H D+
Sbjct: 74 EPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 129
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+ +N+L+ + KV+DFGL+R+ + E+
Sbjct: 130 RAANILVGENLVCKVADFGLARLIEDNEY 158
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 7/141 (4%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
IG+G SGTV+ + G+ +AI++++ + NE+ ++ ++P +V L +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 150 ERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGD 209
++ +V EY+ SL +++ + Q + + +ALEFLH VIH D
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRD 141
Query: 210 IKPSNVLLDSDCRGKVSDFGL 230
IK N+LL D K++DFG
Sbjct: 142 IKSDNILLGMDGSVKLTDFGF 162
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 563 FSRELSSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRP 612
+ E S ++M GT ++APE K DI+SLG++ + ++ G P
Sbjct: 166 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G+G G V++G +AIK L ++ E F E Q++ LR LV L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I V EYM SL + L + L+ Q ++ +A + ++ +H D+
Sbjct: 85 EPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+ +N+L+ + KV+DFGL+R+ + E+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEY 169
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 7/141 (4%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
IG+G SGTV+ + G+ +AI++++ + NE+ ++ ++P +V L +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 150 ERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGD 209
++ +V EY+ SL +++ + Q + + +ALEFLH VIH D
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRD 141
Query: 210 IKPSNVLLDSDCRGKVSDFGL 230
IK N+LL D K++DFG
Sbjct: 142 IKSDNILLGMDGSVKLTDFGF 162
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 563 FSRELSSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRP 612
+ E S + M GT ++APE K DI+SLG++ + ++ G P
Sbjct: 166 ITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 5/160 (3%)
Query: 75 YKELKNATNDFDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTEREFQNELQIL 133
Y + + D + +G G G V+ G+ + L +A+K L +++ E EF E ++
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 68
Query: 134 GGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKA 193
++ P LV LLG C ++ E+M +L + L + + ++ A
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 194 LEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+E+L IH D+ N L+ + KV+DFGLSR+
Sbjct: 129 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 165
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 8/157 (5%)
Query: 77 ELKNATNDFDEANVIGKGGSGTVFLGIARDGKLLAIKRLDTFSLQ--TEREFQNELQILG 134
ELK+ +DF++ + +G G G VF + L+ ++L ++ + ELQ+L
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 135 GLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKAL 194
SP++V G + + E+M SL ++L G + + + I V K L
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGL 117
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
+L ++H D+KPSN+L++S K+ DFG+S
Sbjct: 118 TYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 77/159 (48%), Gaps = 11/159 (6%)
Query: 79 KNATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQTEREFQN---ELQILG 134
K NDFD ++GKG G V L + G+ A+K L + + E + E ++L
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 63
Query: 135 GLRSPFLVTLLGYCMERNKRI-LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKA 193
R PFL T L Y + + R+ V EY L L S + + RF ++ A
Sbjct: 64 NTRHPFL-TALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARF-YGAEIVSA 120
Query: 194 LEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
LE+LH V++ DIK N++LD D K++DFGL +
Sbjct: 121 LEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 156
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 7/141 (4%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
IG+G SGTV+ + G+ +AI++++ + NE+ ++ ++P +V L +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 150 ERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGD 209
++ +V EY+ SL +++ + Q + + +ALEFLH VIH D
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRD 142
Query: 210 IKPSNVLLDSDCRGKVSDFGL 230
IK N+LL D K++DFG
Sbjct: 143 IKSDNILLGMDGSVKLTDFGF 163
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 563 FSRELSSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRP 612
+ E S + M GT ++APE K DI+SLG++ + ++ G P
Sbjct: 167 ITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 77/159 (48%), Gaps = 11/159 (6%)
Query: 79 KNATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQTEREFQN---ELQILG 134
K NDFD ++GKG G V L + G+ A+K L + + E + E ++L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 135 GLRSPFLVTLLGYCMERNKRI-LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKA 193
R PFL T L Y + + R+ V EY L L S + + RF ++ A
Sbjct: 61 NTRHPFL-TALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARF-YGAEIVSA 117
Query: 194 LEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
LE+LH V++ DIK N++LD D K++DFGL +
Sbjct: 118 LEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 77/159 (48%), Gaps = 11/159 (6%)
Query: 79 KNATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQTEREFQN---ELQILG 134
K NDFD ++GKG G V L + G+ A+K L + + E + E ++L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 135 GLRSPFLVTLLGYCMERNKRI-LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKA 193
R PFL T L Y + + R+ V EY L L S + + RF ++ A
Sbjct: 61 NTRHPFL-TALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARF-YGAEIVSA 117
Query: 194 LEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
LE+LH V++ DIK N++LD D K++DFGL +
Sbjct: 118 LEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 5/160 (3%)
Query: 75 YKELKNATNDFDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTEREFQNELQIL 133
Y + + D + +G G G V+ G+ + L +A+K L +++ E EF E ++
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 63
Query: 134 GGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKA 193
++ P LV LLG C ++ E+M +L + L + + ++ A
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 194 LEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+E+L IH D+ N L+ + KV+DFGLSR+
Sbjct: 124 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 160
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G+G G V++G +AIK L ++ E F E Q++ LR LV L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I V EYM SL + L + L+ Q ++ +A + ++ +H D+
Sbjct: 85 EPIYI-VCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+ +N+L+ + KV+DFGL+R+ + E+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEY 169
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 5/160 (3%)
Query: 75 YKELKNATNDFDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTEREFQNELQIL 133
Y + + D + +G G G V+ G+ + L +A+K L +++ E EF E ++
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 64
Query: 134 GGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKA 193
++ P LV LLG C ++ E+M +L + L + + ++ A
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 124
Query: 194 LEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+E+L IH D+ N L+ + KV+DFGLSR+
Sbjct: 125 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 161
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 8/157 (5%)
Query: 77 ELKNATNDFDEANVIGKGGSGTVFLGIARDGKLLAIKRLDTFSLQ--TEREFQNELQILG 134
ELK+ +DF++ + +G G G VF + L+ ++L ++ + ELQ+L
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 135 GLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKAL 194
SP++V G + + E+M SL ++L G + + + I V K L
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGL 117
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
+L ++H D+KPSN+L++S K+ DFG+S
Sbjct: 118 TYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G+G G V++G +AIK L ++ E F E Q++ LR LV L E
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I V EYM SL + L + L+ Q ++ +A + ++ +H D+
Sbjct: 252 EPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 307
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+ +N+L+ + KV+DFGL R+ + E+
Sbjct: 308 RAANILVGENLVCKVADFGLGRLIEDNEY 336
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 90/164 (54%), Gaps = 15/164 (9%)
Query: 77 ELKNATNDFDEANVIGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQTEREFQN----- 128
++K+ +++ + +G+G TV+ ARD +++AIK++ ++ N
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVY--KARDKNTNQIVAIKKIKLGHRSEAKDGINRTALR 61
Query: 129 ELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM 188
E+++L L P ++ LL ++ LV+++M ++ E++ D +LVL S ++
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM--ETDLEVIIKDNSLVLTPSHIKAYML 119
Query: 189 DVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ LE+LH ++H D+KP+N+LLD + K++DFGL++
Sbjct: 120 MTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 77/159 (48%), Gaps = 11/159 (6%)
Query: 79 KNATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQTEREFQN---ELQILG 134
K NDFD ++GKG G V L + G+ A+K L + + E + E ++L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 135 GLRSPFLVTLLGYCMERNKRI-LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKA 193
R PFL T L Y + + R+ V EY L L S + + RF ++ A
Sbjct: 61 NTRHPFL-TALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARF-YGAEIVSA 117
Query: 194 LEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
LE+LH V++ DIK N++LD D K++DFGL +
Sbjct: 118 LEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 5/160 (3%)
Query: 75 YKELKNATNDFDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTEREFQNELQIL 133
Y + + D + +G G G V+ G+ + L +A+K L +++ E EF E ++
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 68
Query: 134 GGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKA 193
++ P LV LLG C ++ E+M +L + L + + ++ A
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 194 LEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+E+L IH D+ N L+ + KV+DFGLSR+
Sbjct: 129 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 165
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 5/160 (3%)
Query: 75 YKELKNATNDFDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTEREFQNELQIL 133
Y + + D + +G G G V+ G+ + L +A+K L +++ E EF E ++
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 63
Query: 134 GGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKA 193
++ P LV LLG C ++ E+M +L + L + + ++ A
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 194 LEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+E+L IH D+ N L+ + KV+DFGLSR+
Sbjct: 124 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 160
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 5/160 (3%)
Query: 75 YKELKNATNDFDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTEREFQNELQIL 133
Y + + D + +G G G V+ G+ + L +A+K L +++ E EF E ++
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 63
Query: 134 GGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKA 193
++ P LV LLG C ++ E+M +L + L + + ++ A
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 194 LEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+E+L IH D+ N L+ + KV+DFGLSR+
Sbjct: 124 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 160
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 5/160 (3%)
Query: 75 YKELKNATNDFDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTEREFQNELQIL 133
Y + + D + +G G G V+ G+ + L +A+K L +++ E EF E ++
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 68
Query: 134 GGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKA 193
++ P LV LLG C ++ E+M +L + L + + ++ A
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 194 LEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+E+L IH D+ N L+ + KV+DFGLSR+
Sbjct: 129 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 165
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 5/152 (3%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTEREFQNELQILGGLRSPFL 141
D + +G G G V+ G+ + L +A+K L +++ E EF E ++ ++ P L
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNL 69
Query: 142 VTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGC 201
V LLG C ++ E+M +L + L + + ++ A+E+L
Sbjct: 70 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--- 126
Query: 202 DPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH D+ N L+ + KV+DFGLSR+
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 158
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 5/160 (3%)
Query: 75 YKELKNATNDFDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTEREFQNELQIL 133
Y + + D + +G G G V+ G+ + L +A+K L +++ E EF E ++
Sbjct: 9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 67
Query: 134 GGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKA 193
++ P LV LLG C ++ E+M +L + L + + ++ A
Sbjct: 68 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 127
Query: 194 LEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+E+L IH D+ N L+ + KV+DFGLSR+
Sbjct: 128 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 164
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 5/152 (3%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTEREFQNELQILGGLRSPFL 141
D + +G G G V+ G+ + L +A+K L +++ E EF E ++ ++ P L
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNL 76
Query: 142 VTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGC 201
V LLG C ++ E+M +L + L + + ++ A+E+L
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--- 133
Query: 202 DPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH D+ N L+ + KV+DFGLSR+
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 165
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 77/159 (48%), Gaps = 11/159 (6%)
Query: 79 KNATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQTEREFQN---ELQILG 134
K NDFD ++GKG G V L + G+ A+K L + + E + E ++L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 135 GLRSPFLVTLLGYCMERNKRI-LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKA 193
R PFL T L Y + + R+ V EY L L S + + RF ++ A
Sbjct: 61 NTRHPFL-TALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARF-YGAEIVSA 117
Query: 194 LEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
LE+LH V++ DIK N++LD D K++DFGL +
Sbjct: 118 LEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 8/157 (5%)
Query: 77 ELKNATNDFDEANVIGKGGSGTVFLGIARDGKLLAIKRLDTFSLQ--TEREFQNELQILG 134
ELK+ +DF++ + +G G G VF + L+ ++L ++ + ELQ+L
Sbjct: 5 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 62
Query: 135 GLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKAL 194
SP++V G + + E+M SL ++L G + + + I V K L
Sbjct: 63 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGL 120
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
+L ++H D+KPSN+L++S K+ DFG+S
Sbjct: 121 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 155
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 5/143 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G+G G V++G +AIK L ++ E F E Q++ LR LV L E
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I V EYM SL + L + L+ Q ++ +A + ++ +H D+
Sbjct: 75 EPIXI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 130
Query: 211 KPSNVLLDSDCRGKVSDFGLSRI 233
+ +N+L+ + KV+DFGL+R+
Sbjct: 131 RAANILVGENLVCKVADFGLARL 153
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 5/152 (3%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTEREFQNELQILGGLRSPFL 141
D + +G G G V+ G+ + L +A+K L +++ E EF E ++ ++ P L
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNL 71
Query: 142 VTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGC 201
V LLG C ++ E+M +L + L + + ++ A+E+L
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--- 128
Query: 202 DPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH D+ N L+ + KV+DFGLSR+
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 160
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 5/152 (3%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTEREFQNELQILGGLRSPFL 141
D + +G G G V+ G+ + L +A+K L +++ E EF E ++ ++ P L
Sbjct: 26 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNL 84
Query: 142 VTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGC 201
V LLG C ++ E+M +L + L + + ++ A+E+L
Sbjct: 85 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--- 141
Query: 202 DPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH D+ N L+ + KV+DFGLSR+
Sbjct: 142 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 173
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 77/159 (48%), Gaps = 11/159 (6%)
Query: 79 KNATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQTEREFQN---ELQILG 134
K NDFD ++GKG G V L + G+ A+K L + + E + E ++L
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 65
Query: 135 GLRSPFLVTLLGYCMERNKRI-LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKA 193
R PFL T L Y + + R+ V EY L L S + + RF ++ A
Sbjct: 66 NTRHPFL-TALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARF-YGAEIVSA 122
Query: 194 LEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
LE+LH V++ DIK N++LD D K++DFGL +
Sbjct: 123 LEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 158
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 5/152 (3%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTEREFQNELQILGGLRSPFL 141
D + +G G G V+ G+ + L +A+K L +++ E EF E ++ ++ P L
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNL 73
Query: 142 VTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGC 201
V LLG C ++ E+M +L + L + + ++ A+E+L
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--- 130
Query: 202 DPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH D+ N L+ + KV+DFGLSR+
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 162
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 5/152 (3%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTEREFQNELQILGGLRSPFL 141
D + +G G G V+ G+ + L +A+K L +++ E EF E ++ ++ P L
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNL 71
Query: 142 VTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGC 201
V LLG C ++ E+M +L + L + + ++ A+E+L
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--- 128
Query: 202 DPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH D+ N L+ + KV+DFGLSR+
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 160
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 5/152 (3%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTEREFQNELQILGGLRSPFL 141
D + +G G G V+ G+ + L +A+K L +++ E EF E ++ ++ P L
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNL 73
Query: 142 VTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGC 201
V LLG C ++ E+M +L + L + + ++ A+E+L
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--- 130
Query: 202 DPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH D+ N L+ + KV+DFGLSR+
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 162
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLR 137
+ +F + IG+G G V+ + G+++A+K RLDT + E+ +L L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
P +V LL NK LV+E++ ++ L++ + + + + + + L F
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
H V+H D+KP N+L++++ K++DFGL+R
Sbjct: 120 H---SHRVLHRDLKPENLLINTEGAIKLADFGLAR 151
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 5/152 (3%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTEREFQNELQILGGLRSPFL 141
D + +G G G V+ G+ + L +A+K L +++ E EF E ++ ++ P L
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNL 72
Query: 142 VTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGC 201
V LLG C ++ E+M +L + L + + ++ A+E+L
Sbjct: 73 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--- 129
Query: 202 DPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH D+ N L+ + KV+DFGLSR+
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 161
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 5/152 (3%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTEREFQNELQILGGLRSPFL 141
D + +G G G V+ G+ + L +A+K L +++ E EF E ++ ++ P L
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNL 71
Query: 142 VTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGC 201
V LLG C ++ E+M +L + L + + ++ A+E+L
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--- 128
Query: 202 DPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH D+ N L+ + KV+DFGLSR+
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 160
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 77/159 (48%), Gaps = 11/159 (6%)
Query: 79 KNATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQTEREFQN---ELQILG 134
K NDFD ++GKG G V L + G+ A+K L + + E + E ++L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 135 GLRSPFLVTLLGYCMERNKRI-LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKA 193
R PFL T L Y + + R+ V EY L L S + + RF ++ A
Sbjct: 61 NTRHPFL-TALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARF-YGAEIVSA 117
Query: 194 LEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
LE+LH V++ DIK N++LD D K++DFGL +
Sbjct: 118 LEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 5/143 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G+G G V++G +AIK L ++ E F E Q++ LR LV L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I++ EYM SL + L + L+ Q ++ +A + ++ +H D+
Sbjct: 85 EPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 211 KPSNVLLDSDCRGKVSDFGLSRI 233
+ +N+L+ + KV+DFGL+R+
Sbjct: 141 RAANILVGENLVCKVADFGLARL 163
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLR 137
+ +F + IG+G G V+ + G+++A+K RLDT + E+ +L L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
P +V LL NK LV+E++ ++ L++ + + + + + + L F
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
H V+H D+KP N+L++++ K++DFGL+R
Sbjct: 121 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLR 137
+ +F + IG+G G V+ + G+++A+K RLDT + E+ +L L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
P +V LL NK LV+E++ ++ L++ + + + + + + L F
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
H V+H D+KP N+L++++ K++DFGL+R
Sbjct: 120 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 5/152 (3%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTEREFQNELQILGGLRSPFL 141
D + +G G G V+ G+ + L +A+K L +++ E EF E ++ ++ P L
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNL 73
Query: 142 VTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGC 201
V LLG C ++ E+M +L + L + + ++ A+E+L
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--- 130
Query: 202 DPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH D+ N L+ + KV+DFGLSR+
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 162
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G+G G V++G +AIK L ++ E F E Q++ LR LV L E
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I V EYM SL + L + L+ Q ++ +A + ++ +H D+
Sbjct: 82 EPIYI-VTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRDL 137
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+ +N+L+ + KV+DFGL+R+ + E+
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEY 166
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 8/157 (5%)
Query: 77 ELKNATNDFDEANVIGKGGSGTVFLGIARDGKLLAIKRLDTFSLQ--TEREFQNELQILG 134
ELK+ +DF++ + +G G G VF + L+ ++L ++ + ELQ+L
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 135 GLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKAL 194
SP++V G + + E+M SL ++L G + + + I V K L
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGL 117
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
+L ++H D+KPSN+L++S K+ DFG+S
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 8/157 (5%)
Query: 77 ELKNATNDFDEANVIGKGGSGTVFLGIARDGKLLAIKRLDTFSLQ--TEREFQNELQILG 134
ELK+ +DF++ + +G G G VF + L+ ++L ++ + ELQ+L
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 135 GLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKAL 194
SP++V G + + E+M SL ++L G + + + I V K L
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGL 117
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
+L ++H D+KPSN+L++S K+ DFG+S
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLR 137
+ +F + IG+G G V+ + G+++A+K RLDT + E+ +L L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
P +V LL NK LV+E++ ++ L++ + + + + + + L F
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
H V+H D+KP N+L++++ K++DFGL+R
Sbjct: 123 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLR 137
+ +F + IG+G G V+ + G+++A+K RLDT + E+ +L L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
P +V LL NK LV+E++ ++ L++ + + + + + + L F
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
H V+H D+KP N+L++++ K++DFGL+R
Sbjct: 122 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLR 137
+ +F + IG+G G V+ + G+++A+K RLDT + E+ +L L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
P +V LL NK LV+E++ ++ L++ + + + + + + L F
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
H V+H D+KP N+L++++ K++DFGL+R
Sbjct: 122 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 5/160 (3%)
Query: 75 YKELKNATNDFDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTEREFQNELQIL 133
Y + + D + +G G G V+ G+ + L +A+K L +++ E EF E ++
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 68
Query: 134 GGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKA 193
++ P LV LLG C ++ E+M +L + L + + ++ A
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 194 LEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+E+L IH D+ N L+ + KV+DFGLSR+
Sbjct: 129 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 165
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 39/219 (17%)
Query: 82 TNDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQ---NELQILGGLR 137
+DF+E V+G+G G V A D + AIK++ TE + +E+ +L L
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR----HTEEKLSTILSEVMLLASLN 60
Query: 138 SPFLVTLLGYCMERNKRI-------------LVYEYMPNKSLQEMLFSDGNLVLKWSQRF 184
++V +ER + + EY N +L +++ S+ NL + + +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSE-NLNQQRDEYW 119
Query: 185 EIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEFGMDLF 244
+ + +AL ++H +IH D+KP N+ +D K+ DFGL++ +D+
Sbjct: 120 RLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAK---NVHRSLDIL 173
Query: 245 SQDLGKSQELWKSQELSGNLATATETPAISTPVDSAHEV 283
D SQ L G ++ T AI T + A EV
Sbjct: 174 KLD---------SQNLPG--SSDNLTSAIGTAMYVATEV 201
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 571 TSMRGTLCYVAPEY-GGCGYLMEKADIYSLGVLILVIV 607
TS GT YVA E G G+ EK D+YSLG++ ++
Sbjct: 188 TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 7/152 (4%)
Query: 84 DFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLRSPF 140
+F + IG+G G V+ + G+++A+K RLDT + E+ +L L P
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 141 LVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFG 200
+V LL NK LV+E++ ++ L++ + + + + + + L F H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCH-- 120
Query: 201 CDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
V+H D+KP N+L++++ K++DFGL+R
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 7/152 (4%)
Query: 84 DFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLRSPF 140
+F + IG+G G V+ + G+++A+K RLDT + E+ +L L P
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 141 LVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFG 200
+V LL NK LV+E++ ++ L++ + + + + + + L F H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 119
Query: 201 CDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
V+H D+KP N+L++++ K++DFGL+R
Sbjct: 120 -SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLR 137
+ +F + IG+G G V+ + G+++A+K RLDT + E+ +L L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
P +V LL NK LV+E++ ++ L++ + + + + + + L F
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
H V+H D+KP N+L++++ K++DFGL+R
Sbjct: 120 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLR 137
+ +F + IG+G G V+ + G+++A+K RLDT + E+ +L L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
P +V LL NK LV+E++ ++ L++ + + + + + + L F
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
H V+H D+KP N+L++++ K++DFGL+R
Sbjct: 121 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLR 137
+ +F + IG+G G V+ + G+++A+K RLDT + E+ +L L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
P +V LL NK LV+E++ ++ L++ + + + + + + L F
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
H V+H D+KP N+L++++ K++DFGL+R
Sbjct: 120 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLR 137
+ +F + IG+G G V+ + G+++A+K RLDT + E+ +L L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
P +V LL NK LV+E++ ++ L++ + + + + + + L F
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
H V+H D+KP N+L++++ K++DFGL+R
Sbjct: 121 H---SHRVLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 13/184 (7%)
Query: 56 RSRTIPFDSNAPLKLQRFTYKELKNATNDFDEANVIGKGGSGTVFLG----IARDGKLLA 111
R+ P P + KEL D+ V+G G G V G ++ +A
Sbjct: 20 RTYVDPHTYEDPTQTVHEFAKELDATNISIDK--VVGAGEFGEVCSGRLKLPSKKEISVA 77
Query: 112 IKRLDT-FSLQTEREFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEML 170
IK L ++ + R+F E I+G P ++ L G + ++V E M N SL L
Sbjct: 78 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL 137
Query: 171 FS-DGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFG 229
D + Q ++ +A +++L D +H D+ N+L++S+ KVSDFG
Sbjct: 138 RKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFG 192
Query: 230 LSRI 233
LSR+
Sbjct: 193 LSRV 196
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLR 137
+ +F + IG+G G V+ + G+++A+K RLDT + E+ +L L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
P +V LL NK LV+E++ ++ L++ + + + + + + L F
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
H V+H D+KP N+L++++ K++DFGL+R
Sbjct: 123 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 7/152 (4%)
Query: 84 DFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLRSPF 140
+F + IG+G G V+ + G+++A+K RLDT + E+ +L L P
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 141 LVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFG 200
+V LL NK LV+E++ ++ L++ + + + + + + L F H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 119
Query: 201 CDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
V+H D+KP N+L++++ K++DFGL+R
Sbjct: 120 -SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 5/152 (3%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTEREFQNELQILGGLRSPFL 141
D + +G G G V+ G+ + L +A+K L +++ E EF E ++ ++ P L
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNL 69
Query: 142 VTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGC 201
V LLG C ++ E+M +L + L + + ++ A+E+L
Sbjct: 70 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--- 126
Query: 202 DPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH D+ N L+ + KV+DFGLSR+
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 158
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLR 137
+ +F + IG+G G V+ + G+++A+K RLDT + E+ +L L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
P +V LL NK LV+E++ ++ L++ + + + + + + L F
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
H V+H D+KP N+L++++ K++DFGL+R
Sbjct: 120 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLR 137
+ +F + IG+G G V+ + G+++A+K RLDT + E+ +L L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
P +V LL NK LV+E++ ++ L++ + + + + + + L F
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
H V+H D+KP N+L++++ K++DFGL+R
Sbjct: 122 H---SHRVLHRDLKPENLLINTEGAIKLADFGLAR 153
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
Query: 91 IGKGGSGTVFLGIA-----RDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLL 145
+GKG G+V + G+++A+K+L + + R+F+ E++IL L+ +V
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 146 GYCMERNKR--ILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
G C +R L+ EY+P SL++ L + + + + K +E+L
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIKLLQYTSQICKGMEYL---GTK 134
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH ++ N+L++++ R K+ DFGL+++
Sbjct: 135 RYIHRNLATRNILVENENRVKIGDFGLTKV 164
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 7/152 (4%)
Query: 84 DFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLRSPF 140
+F + IG+G G V+ + G+++A+K RLDT + E+ +L L P
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 141 LVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFG 200
+V LL NK LV+E++ ++ L++ + + + + + + L F H
Sbjct: 71 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 127
Query: 201 CDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
V+H D+KP N+L++++ K++DFGL+R
Sbjct: 128 -SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 7/152 (4%)
Query: 84 DFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLRSPF 140
+F + IG+G G V+ + G+++A+K RLDT + E+ +L L P
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 141 LVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFG 200
+V LL NK LV+E++ ++ L++ + + + + + + L F H
Sbjct: 68 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 124
Query: 201 CDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
V+H D+KP N+L++++ K++DFGL+R
Sbjct: 125 -SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 7/152 (4%)
Query: 84 DFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLRSPF 140
+F + IG+G G V+ + G+++A+K RLDT + E+ +L L P
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 141 LVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFG 200
+V LL NK LV+E++ ++ L++ + + + + + + L F H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 121
Query: 201 CDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
V+H D+KP N+L++++ K++DFGL+R
Sbjct: 122 -SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 7/152 (4%)
Query: 84 DFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLRSPF 140
+F + IG+G G V+ + G+++A+K RLDT + E+ +L L P
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 141 LVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFG 200
+V LL NK LV+E++ ++ L++ + + + + + + L F H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 120
Query: 201 CDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
V+H D+KP N+L++++ K++DFGL+R
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 7/152 (4%)
Query: 84 DFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLRSPF 140
+F + IG+G G V+ + G+++A+K RLDT + E+ +L L P
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 141 LVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFG 200
+V LL NK LV+E++ ++ L++ + + + + + + L F H
Sbjct: 71 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 127
Query: 201 CDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
V+H D+KP N+L++++ K++DFGL+R
Sbjct: 128 -SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G+G G V++G +AIK L ++ E F E Q++ +R LV L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I V EYM SL + L + L+ Q ++ +A + ++ +H D+
Sbjct: 85 EPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+ +N+L+ + KV+DFGL+R+ + E+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEY 169
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 7/152 (4%)
Query: 84 DFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLRSPF 140
+F + IG+G G V+ + G+++A+K RLDT + E+ +L L P
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 141 LVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFG 200
+V LL NK LV+E++ ++ L++ + + + + + + L F H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 119
Query: 201 CDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
V+H D+KP N+L++++ K++DFGL+R
Sbjct: 120 -SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 7/152 (4%)
Query: 84 DFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLRSPF 140
+F + IG+G G V+ + G+++A+K RLDT + E+ +L L P
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 141 LVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFG 200
+V LL NK LV+E++ ++ L++ + + + + + + L F H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 120
Query: 201 CDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
V+H D+KP N+L++++ K++DFGL+R
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 5/152 (3%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTEREFQNELQILGGLRSPFL 141
D + +G G G V+ G+ + L +A+K L +++ E EF E ++ ++ P L
Sbjct: 11 TDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNL 69
Query: 142 VTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGC 201
V LLG C ++ E+M +L + L + + ++ A+E+L
Sbjct: 70 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--- 126
Query: 202 DPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH D+ N L+ + KV+DFGLSR+
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 158
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLR 137
+ +F + IG+G G V+ + G+++A+K RLDT + E+ +L L
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
P +V LL NK LV+E++ ++ L++ + + + + + + L F
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
H V+H D+KP N+L++++ K++DFGL+R
Sbjct: 124 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 7/152 (4%)
Query: 84 DFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLRSPF 140
+F + IG+G G V+ + G+++A+K RLDT + E+ +L L P
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 141 LVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFG 200
+V LL NK LV+E++ ++ L++ + + + + + + L F H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 120
Query: 201 CDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
V+H D+KP N+L++++ K++DFGL+R
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 80/168 (47%), Gaps = 25/168 (14%)
Query: 82 TNDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQ---NELQILGGLR 137
+DF+E V+G+G G V A D + AIK++ TE + +E+ +L L
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR----HTEEKLSTILSEVXLLASLN 60
Query: 138 SPFLVTLLGYCMERNKRI-------------LVYEYMPNKSLQEMLFSDGNLVLKWSQRF 184
++V +ER + + EY N++L +++ S+ NL + + +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSE-NLNQQRDEYW 119
Query: 185 EIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ + +AL ++H +IH ++KP N+ +D K+ DFGL++
Sbjct: 120 RLFRQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAK 164
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 571 TSMRGTLCYVAPEY-GGCGYLMEKADIYSLGVLIL 604
TS GT YVA E G G+ EK D YSLG++
Sbjct: 188 TSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFF 222
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 7/152 (4%)
Query: 84 DFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLRSPF 140
+F + IG+G G V+ + G+++A+K RLDT + E+ +L L P
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 141 LVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFG 200
+V LL NK LV+E++ ++ L++ + + + + + + L F H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 119
Query: 201 CDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
V+H D+KP N+L++++ K++DFGL+R
Sbjct: 120 -SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 8/149 (5%)
Query: 85 FDEANVIGKGGSGTVFLGIARDGK-LLAIKRLD-TFSLQTEREFQNELQILGGLRSPFLV 142
F + + IGKG G V+ GI K ++AIK +D + + Q E+ +L SP++
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 143 TLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCD 202
G ++ K ++ EY+ S ++L L+ + I+ ++ K L++LH
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGP---LEETYIATILREILKGLDYLH---S 134
Query: 203 PPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
IH DIK +NVLL K++DFG++
Sbjct: 135 ERKIHRDIKAANVLLSEQGDVKLADFGVA 163
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 13/164 (7%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLG----IARDGKLLAIKRLDT-FSLQTEREFQNEL 130
KEL D+ V+G G G V G ++ +AIK L ++ + R+F E
Sbjct: 40 KELDATNISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 131 QILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFS-DGNLVLKWSQRFEIIMD 189
I+G P ++ L G + ++V E M N SL L D + Q ++
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRG 155
Query: 190 VAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+A +++L D +H D+ N+L++S+ KVSDFGLSR+
Sbjct: 156 IASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRV 196
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 13/158 (8%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLR 137
+ +F + IG+G G V+ + G+++A+K RLDT + E+ +L L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 138 SPFLVTLLGYCMERNKRILVYEYMP---NKSLQEMLFSDGNLVLKWSQRFEIIMDVAKAL 194
P +V LL NK LV+E++ K + + L L S F+++ + L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLL----QGL 119
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
F H V+H D+KP N+L++++ K++DFGL+R
Sbjct: 120 AFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLAR 154
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 13/158 (8%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLR 137
+ +F + IG+G G V+ + G+++A+K RLDT + E+ +L L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 138 SPFLVTLLGYCMERNKRILVYEYMP---NKSLQEMLFSDGNLVLKWSQRFEIIMDVAKAL 194
P +V LL NK LV+E++ K + + L L S F+++ + L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLL----QGL 117
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
F H V+H D+KP N+L++++ K++DFGL+R
Sbjct: 118 AFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G+G G V++G +AIK L ++ E F E Q++ LR LV L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I V EYM SL + L + L+ Q ++ +A + ++ +H D+
Sbjct: 85 EPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+N+L+ + KV+DFGL+R+ + E+
Sbjct: 141 AAANILVGENLVCKVADFGLARLIEDNEY 169
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 13/164 (7%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLG----IARDGKLLAIKRLDT-FSLQTEREFQNEL 130
KEL D+ V+G G G V G ++ +AIK L ++ + R+F E
Sbjct: 11 KELDATNISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 68
Query: 131 QILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFS-DGNLVLKWSQRFEIIMD 189
I+G P ++ L G + ++V E M N SL L D + Q ++
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRG 126
Query: 190 VAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+A +++L D +H D+ N+L++S+ KVSDFGLSR+
Sbjct: 127 IASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRV 167
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 7/155 (4%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLR 137
+ +F + IG+G G V+ + G+++A+K RLDT + E+ +L L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
P +V LL NK LV+E++ ++ L+ + + + + + + L F
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
H V+H D+KP N+L++++ K++DFGL+R
Sbjct: 123 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 24/170 (14%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARD---GKLLAIKRLDT---------FSLQTEREFQN 128
AT+ ++ IG G GTV+ ARD G +A+K + + T RE
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYK--ARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVA- 63
Query: 129 ELQILGGLRSPFLVTLLGYCMERN-----KRILVYEYMPNKSLQEMLFSDGNLVLKWSQR 183
L+ L P +V L+ C K LV+E++ ++ L+ L L
Sbjct: 64 LLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETI 122
Query: 184 FEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+++ + L+FLH C ++H D+KP N+L+ S K++DFGL+RI
Sbjct: 123 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 169
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 18/163 (11%)
Query: 83 NDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQTERE-FQNELQILGGLRSPF 140
DF+ +G+GG G VF + D AIKR+ + + RE E++ L L P
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 141 LVTLLGYCMERN-------KRILVYEYMPNKSLQEMLFSD---GNLVLKWSQR---FEII 187
+V +E+N VY Y+ + ++ D G ++ +R I
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124
Query: 188 MDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGL 230
+ +A+A+EFLH ++H D+KPSN+ D KV DFGL
Sbjct: 125 LQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGL 164
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 85/171 (49%), Gaps = 21/171 (12%)
Query: 79 KNATNDFDEANVIGKGGSGTVFLGIARDG----KLLAIKRLDTFSLQTEREFQNELQ--I 132
K + F+ V+G+G G VFL G +L A+K L +L+ + +++ I
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 79
Query: 133 LGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSL-----QEMLFSDGNLVLKWSQRFEII 187
L + PF+V L K L+ +++ L +E++F++ ++ +
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-------YL 132
Query: 188 MDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGE 238
++A AL+ LH +I+ D+KP N+LLD + K++DFGLS+ ++ E
Sbjct: 133 AELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 180
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G+G G V++G +AIK L ++ E F E Q++ LR LV L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I V EYM L + L + L+ Q ++ +A + ++ +H D+
Sbjct: 85 EPIYI-VMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+ +N+L+ + KV+DFGL+R+ + E+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEY 169
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 85/171 (49%), Gaps = 21/171 (12%)
Query: 79 KNATNDFDEANVIGKGGSGTVFLGIARDG----KLLAIKRLDTFSLQTEREFQNELQ--I 132
K + F+ V+G+G G VFL G +L A+K L +L+ + +++ I
Sbjct: 21 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 80
Query: 133 LGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSL-----QEMLFSDGNLVLKWSQRFEII 187
L + PF+V L K L+ +++ L +E++F++ ++ +
Sbjct: 81 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-------YL 133
Query: 188 MDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGE 238
++A AL+ LH +I+ D+KP N+LLD + K++DFGLS+ ++ E
Sbjct: 134 AELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 181
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 25/162 (15%)
Query: 85 FDEANVIGKGGSGTVF----LGIARDGKLLAIKRL----------DTFSLQTEREFQNEL 130
F+ V+GKGG G VF + A GK+ A+K L DT + ER
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER------ 72
Query: 131 QILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDV 190
IL ++ PF+V L+ K L+ EY+ L L +G + ++ + F + ++
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREG-IFMEDTACF-YLAEI 130
Query: 191 AKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ AL LH +I+ D+KP N++L+ K++DFGL +
Sbjct: 131 SMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK 169
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 25/162 (15%)
Query: 85 FDEANVIGKGGSGTVF----LGIARDGKLLAIKRL----------DTFSLQTEREFQNEL 130
F+ V+GKGG G VF + A GK+ A+K L DT + ER
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER------ 72
Query: 131 QILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDV 190
IL ++ PF+V L+ K L+ EY+ L L +G + ++ + F + ++
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREG-IFMEDTACF-YLAEI 130
Query: 191 AKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ AL LH +I+ D+KP N++L+ K++DFGL +
Sbjct: 131 SMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK 169
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 5/143 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G+G G V++G +AIK L ++ E F E Q++ LR LV L E
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I V EYM SL + L + L+ Q ++ +A + ++ +H D+
Sbjct: 82 EPIYI-VTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRDL 137
Query: 211 KPSNVLLDSDCRGKVSDFGLSRI 233
+ +N+L+ + KV+DFGL+R+
Sbjct: 138 RAANILVGENLVCKVADFGLARL 160
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 85/171 (49%), Gaps = 21/171 (12%)
Query: 79 KNATNDFDEANVIGKGGSGTVFLGIARDG----KLLAIKRLDTFSLQTEREFQNELQ--I 132
K + F+ V+G+G G VFL G +L A+K L +L+ + +++ I
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 79
Query: 133 LGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSL-----QEMLFSDGNLVLKWSQRFEII 187
L + PF+V L K L+ +++ L +E++F++ ++ +
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-------YL 132
Query: 188 MDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGE 238
++A AL+ LH +I+ D+KP N+LLD + K++DFGLS+ ++ E
Sbjct: 133 AELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 180
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLR 137
+ +F + IG+G G V+ + G+++A+K RLDT + E+ +L L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
P +V LL NK LV+E++ ++ L++ + + + + + + L F
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
H V+H D+KP N+L++++ K++DFGL+R
Sbjct: 123 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 80 NATNDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRL--DTFSLQTEREFQNELQILGGL 136
+ ++ ++G+G G V +D G+++AIK+ ++ E+++L L
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEM-LFSDGNLVLKWSQRFEIIMDVAKALE 195
R LV LL C ++ + LV+E++ + L ++ LF +G L + + + + +
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG---LDYQVVQKYLFQIINGIG 138
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
F H +IH DIKP N+L+ K+ DFG +R
Sbjct: 139 FCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFAR 172
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARDGK-LLAIKRLDTFSLQTEREFQN---ELQILGGLRS 138
+ F+ IGKG G V + D K + A+K ++ E +N ELQI+ GL
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH 198
PFLV L + +V + + L+ L N+ K I ++ AL++L
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL--QQNVHFKEETVKLFICELVMALDYLQ 132
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
+ +IH D+KP N+LLD ++DF ++
Sbjct: 133 ---NQRIIHRDMKPDNILLDEHGHVHITDFNIA 162
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 555 SDMWSGDLFSRELSSTTSMRGTLCYVAPEY----GGCGYLMEKADIYSLGVLILVIVSGR 610
+D + RE + T+M GT Y+APE G GY D +SLGV ++ GR
Sbjct: 157 TDFNIAAMLPRE-TQITTMAGTKPYMAPEMFSSRKGAGYSF-AVDWWSLGVTAYELLRGR 214
Query: 611 RPLHVLAS 618
RP H+ +S
Sbjct: 215 RPYHIRSS 222
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G+G G V++G +AIK L ++ E F E Q++ LR LV L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I V EYM L + L + L+ Q ++ +A + ++ +H D+
Sbjct: 85 EPIYI-VTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+ +N+L+ + KV+DFGL+R+ + E+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEY 169
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 7/155 (4%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLR 137
+ +F + IG+G G V+ + G+++A+K RLDT + E+ +L L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
P +V LL NK LV+E++ + L++ + + + + + + L F
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
H V+H D+KP N+L++++ K++DFGL+R
Sbjct: 123 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G G +G V++G +A+K L S+ + F E ++ L+ LV L +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I+ EYM N SL + L + + L ++ ++ +A+ + F+ + IH D+
Sbjct: 80 EPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 135
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGE 238
+ +N+L+ K++DFGL+R+ + E
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDAE 163
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 7/155 (4%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLR 137
+ +F + IG+G G V+ + G+++A+K RLDT + E+ +L L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
P +V LL NK LV+E++ + L++ + + + + + + L F
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
H V+H D+KP N+L++++ K++DFGL+R
Sbjct: 122 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 5/152 (3%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTEREFQNELQILGGLRSPFL 141
D + +G G G V+ G+ + L +A+K L +++ E EF E ++ ++ P L
Sbjct: 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNL 278
Query: 142 VTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGC 201
V LLG C ++ E+M +L + L + + ++ A+E+L
Sbjct: 279 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--- 335
Query: 202 DPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH ++ N L+ + KV+DFGLSR+
Sbjct: 336 KKNFIHRNLAARNCLVGENHLVKVADFGLSRL 367
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 77/152 (50%), Gaps = 7/152 (4%)
Query: 84 DFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLRSPF 140
+F + IG+G G V+ + G+++A+K RLDT + E+ +L L P
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 141 LVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFG 200
+V LL NK LV+E++ ++ L+ + + + + + + L F H
Sbjct: 63 IVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 119
Query: 201 CDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
V+H D+KP N+L++++ K++DFGL+R
Sbjct: 120 -SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 72/141 (51%), Gaps = 7/141 (4%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
IG+G SGTV+ + G+ +AI++++ + NE+ ++ ++P +V L +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 150 ERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGD 209
++ +V EY+ SL +++ + Q + + +ALEFLH VIH +
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRN 142
Query: 210 IKPSNVLLDSDCRGKVSDFGL 230
IK N+LL D K++DFG
Sbjct: 143 IKSDNILLGMDGSVKLTDFGF 163
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 563 FSRELSSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRP 612
+ E S ++M GT ++APE K DI+SLG++ + ++ G P
Sbjct: 167 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Query: 84 DFDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTEREFQNELQILGGLRSPFLV 142
D + +G G G V+ G+ + L +A+K L +++ E EF E ++ ++ P LV
Sbjct: 218 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 276
Query: 143 TLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCD 202
LLG C ++ E+M +L + L + + ++ A+E+L
Sbjct: 277 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---K 333
Query: 203 PPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH ++ N L+ + KV+DFGLSR+
Sbjct: 334 KNFIHRNLAARNCLVGENHLVKVADFGLSRL 364
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G G G V++G +A+K L S+ + F E ++ L+ LV L +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I+ EYM N SL + L + + L ++ ++ +A+ + F+ + IH D+
Sbjct: 90 EPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 145
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+ +N+L+ K++DFGL+R+ + E+
Sbjct: 146 RAANILVSDTLSCKIADFGLARLIEDNEY 174
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G G G V++G +A+K L S+ + F E ++ L+ LV L +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I+ EYM N SL + L + + L ++ ++ +A+ + F+ + IH D+
Sbjct: 85 EPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 140
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+ +N+L+ K++DFGL+R+ + E+
Sbjct: 141 RAANILVSDTLSCKIADFGLARLIEDNEY 169
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G G G V++G +A+K L S+ + F E ++ L+ LV L +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I+ EYM N SL + L + + L ++ ++ +A+ + F+ + IH D+
Sbjct: 86 EPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 141
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+ +N+L+ K++DFGL+R+ + E+
Sbjct: 142 RAANILVSDTLSCKIADFGLARLIEDNEY 170
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 7/141 (4%)
Query: 91 IGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
IG+G +G V + R GKL+A+K++D Q NE+ I+ + +V + +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 150 ERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGD 209
++ +V E++ +L +++ + + Q + + V +AL LH VIH D
Sbjct: 219 VGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRD 272
Query: 210 IKPSNVLLDSDCRGKVSDFGL 230
IK ++LL D R K+SDFG
Sbjct: 273 IKSDSILLTHDGRVKLSDFGF 293
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Query: 84 DFDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTEREFQNELQILGGLRSPFLV 142
D + +G G G V+ G+ + L +A+K L +++ E EF E ++ ++ P LV
Sbjct: 260 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 318
Query: 143 TLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCD 202
LLG C ++ E+M +L + L + + ++ A+E+L
Sbjct: 319 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---K 375
Query: 203 PPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
IH ++ N L+ + KV+DFGLSR+
Sbjct: 376 KNFIHRNLAARNCLVGENHLVKVADFGLSRL 406
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G G G V++G +A+K L S+ + F E ++ L+ LV L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I+ EYM N SL + L + + L ++ ++ +A+ + F+ + IH D+
Sbjct: 80 EPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 135
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+ +N+L+ K++DFGL+R+ + E+
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEY 164
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 17/150 (11%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTERE-----FQNELQILGGLRSPFLV 142
+G GG TV+L A D L +AIK + F E+E F+ E+ L +V
Sbjct: 19 LGGGGMSTVYL--AEDTILNIKVAIKAI--FIPPREKEETLKRFEREVHNSSQLSHQNIV 74
Query: 143 TLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCD 202
+++ E + LV EY+ +L E + S G L + + F + L+ + D
Sbjct: 75 SMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINF-----TNQILDGIKHAHD 129
Query: 203 PPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H DIKP N+L+DS+ K+ DFG+++
Sbjct: 130 MRIVHRDIKPQNILIDSNKTLKIFDFGIAK 159
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 567 LSSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
L+ T + GT+ Y +PE E DIYS+G+++ ++ G P
Sbjct: 166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPF 212
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 88/190 (46%), Gaps = 32/190 (16%)
Query: 62 FDSNAPLKLQRFTYKELKNAT----NDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLD 116
F SNA + F +EL + + +G G G+V + G +A+K+L
Sbjct: 20 FQSNASQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL- 78
Query: 117 TFSLQTEREFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQE-------- 168
R FQ+ I+ R+ + LL + N L+ + P +SL+E
Sbjct: 79 ------SRPFQS---IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 129
Query: 169 -MLFSDGNLVLKWSQRFE-----IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCR 222
++ +D N ++K + + +I + + L+++H +IH D+KPSN+ ++ DC
Sbjct: 130 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 186
Query: 223 GKVSDFGLSR 232
K+ DFGL+R
Sbjct: 187 LKILDFGLAR 196
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 7/141 (4%)
Query: 91 IGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
IG+G +G V + R GKL+A+K++D Q NE+ I+ + +V + +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 150 ERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGD 209
++ +V E++ +L +++ + + Q + + V +AL LH VIH D
Sbjct: 97 VGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRD 150
Query: 210 IKPSNVLLDSDCRGKVSDFGL 230
IK ++LL D R K+SDFG
Sbjct: 151 IKSDSILLTHDGRVKLSDFGF 171
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 7/141 (4%)
Query: 91 IGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
IG+G +G V + R GKL+A+K++D Q NE+ I+ + +V + +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 150 ERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGD 209
++ +V E++ +L +++ + + Q + + V +AL LH VIH D
Sbjct: 99 VGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRD 152
Query: 210 IKPSNVLLDSDCRGKVSDFGL 230
IK ++LL D R K+SDFG
Sbjct: 153 IKSDSILLTHDGRVKLSDFGF 173
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 12/151 (7%)
Query: 90 VIGKGGSGTVFLGIAR--DGKL---LAIKRLDTFSLQTER-EFQNELQILGGLRSPFLVT 143
VIG G G V+ G+ + GK +AIK L + +R +F E I+G ++
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLF-SDGNLVLKWSQRFEIIMDVAKALEFLHFGCD 202
L G + +++ EYM N +L + L DG + Q ++ +A +++L +
Sbjct: 111 LEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVL--QLVGMLRGIAAGMKYL---AN 165
Query: 203 PPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+H D+ N+L++S+ KVSDFGLSR+
Sbjct: 166 MNYVHRDLAARNILVNSNLVCKVSDFGLSRV 196
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 7/141 (4%)
Query: 91 IGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
IG+G +G V + R GKL+A+K++D Q NE+ I+ + +V + +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 150 ERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGD 209
++ +V E++ +L +++ + + Q + + V +AL LH VIH D
Sbjct: 88 VGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRD 141
Query: 210 IKPSNVLLDSDCRGKVSDFGL 230
IK ++LL D R K+SDFG
Sbjct: 142 IKSDSILLTHDGRVKLSDFGF 162
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 79/163 (48%), Gaps = 11/163 (6%)
Query: 76 KELKNATNDFDEANV------IGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQN 128
+E ++ D D V +G G G V+ ++ G L A K ++T S + ++
Sbjct: 6 REYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIV 65
Query: 129 ELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM 188
E++IL P++V LLG K ++ E+ P ++ ++ + + L Q +
Sbjct: 66 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIML-ELDRGLTEPQIQVVCR 124
Query: 189 DVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
+ +AL FLH +IH D+K NVL+ + +++DFG+S
Sbjct: 125 QMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVS 164
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 565 RELSSTTSMRGTLCYVAPEYGGCGYLME-----KADIYSLGVLILVIVSGRRPLHVLASP 619
+ L S GT ++APE C + + KADI+SLG+ ++ + P H L +P
Sbjct: 169 KTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL-NP 227
Query: 620 MKL 622
M++
Sbjct: 228 MRV 230
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G G G V++G +A+K L S+ + F E ++ L+ LV L +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I+ EYM N SL + L + + L ++ ++ +A+ + F+ + IH D+
Sbjct: 75 EPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 130
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+ +N+L+ K++DFGL+R+ + E+
Sbjct: 131 RAANILVSDTLSCKIADFGLARLIEDNEY 159
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 7/141 (4%)
Query: 91 IGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
IG+G +G V + R GKL+A+K++D Q NE+ I+ + +V + +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 150 ERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGD 209
++ +V E++ +L +++ + + Q + + V +AL LH VIH D
Sbjct: 92 VGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRD 145
Query: 210 IKPSNVLLDSDCRGKVSDFGL 230
IK ++LL D R K+SDFG
Sbjct: 146 IKSDSILLTHDGRVKLSDFGF 166
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 77/152 (50%), Gaps = 7/152 (4%)
Query: 84 DFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLRSPF 140
+F + IG+G G V+ + G+++A+ RLDT + E+ +L L P
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 141 LVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFG 200
+V LL NK LV+E++ ++ L++ + + + + + + L F H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 120
Query: 201 CDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
V+H D+KP N+L++++ K++DFGL+R
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 77/152 (50%), Gaps = 7/152 (4%)
Query: 84 DFDEANVIGKGGSGTVFLGIAR-DGKLLAIK--RLDTFSLQTEREFQNELQILGGLRSPF 140
+F + IG+G G V+ + G+++A+ RLDT + E+ +L L P
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 141 LVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFG 200
+V LL NK LV+E++ ++ L++ + + + + + + L F H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 119
Query: 201 CDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
V+H D+KP N+L++++ K++DFGL+R
Sbjct: 120 -SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 31/158 (19%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V I R G+ +AIK+L R FQ+E+ R + LL +
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLS-------RPFQSEIFAKRAYRE---LLLLKHMQ 81
Query: 150 ERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---------RFE------IIMDVAKAL 194
N L+ + P SL+ F D LV+ + Q +F ++ + K L
Sbjct: 82 HENVIGLLDVFTPASSLRN--FYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGL 139
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+++H V+H D+KP N+ ++ DC K+ DFGL+R
Sbjct: 140 KYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR 174
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFL-GIARDGKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ IG G G V L G A+K LD + ++ + NE +IL +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EYMP + FS + ++S+ RF + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH D +I+ D+KP N+L+D KV+DFG ++ +V+G
Sbjct: 156 YLH-SLD--LIYRDLKPENLLIDQQGYIKVADFGFAK-RVKG 193
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFL-GIARDGKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ IG G G V L G A+K LD + ++ + NE +IL +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EYMP + FS + ++S+ RF + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH D +I+ D+KP N+L+D KV+DFG ++ +V+G
Sbjct: 156 YLH-SLD--LIYRDLKPENLLIDQQGYIKVADFGFAK-RVKG 193
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 7/141 (4%)
Query: 91 IGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
IG+G +G V + R GKL+A+K++D Q NE+ I+ + +V + +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 150 ERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGD 209
++ +V E++ +L +++ + + Q + + V +AL LH VIH D
Sbjct: 142 VGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRD 195
Query: 210 IKPSNVLLDSDCRGKVSDFGL 230
IK ++LL D R K+SDFG
Sbjct: 196 IKSDSILLTHDGRVKLSDFGF 216
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 25/167 (14%)
Query: 84 DFDEAN---VIGKGGSGTVFLGIARDGKLLAIKRL----DTFSLQTEREFQNELQILGGL 136
DF E +IG GG G V+ G +A+K D QT + E ++ L
Sbjct: 5 DFAELTLEEIIGIGGFGKVYRAF-WIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAML 63
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD---GNLVLKWSQRFEIIMDVAKA 193
+ P ++ L G C++ LV E+ L +L ++++ W+ + +A+
Sbjct: 64 KHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWA------VQIARG 117
Query: 194 LEFLHFGCDPPVIHGDIKPSNVLLDSDCRG--------KVSDFGLSR 232
+ +LH P+IH D+K SN+L+ K++DFGL+R
Sbjct: 118 MNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLD--TFSLQTEREFQNELQILGGLRSPFLVTLLGYC 148
+G G G V++G + +A+K L T S+Q F E ++ L+ LV L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA---FLEEANLMKTLQHDKLVRLYAVV 77
Query: 149 MERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHG 208
++ EYM SL + L SD + + + +A+ + ++ IH
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHR 134
Query: 209 DIKPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
D++ +NVL+ K++DFGL+R+ + E+
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVIEDNEY 165
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLG--IARDGKL---LAIKRL-DTFSLQTEREFQNELQILGGL 136
+F + V+G G GTV+ G I K+ +AIK L + S + +E +E ++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-----GNLVLKWSQRFEIIMDVA 191
+P + LLG C+ + L+ + MP L + + +L W + +A
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 129
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
K + +L D ++H D+ NVL+ + K++DFGL+++
Sbjct: 130 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 168
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 15/163 (9%)
Query: 79 KNATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIK-------RLDTFSLQTEREF-QNE 129
K +D +VIG+G S V + R G A+K RL L+ RE + E
Sbjct: 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRE 149
Query: 130 LQILGGLRS-PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM 188
IL + P ++TL+ + LV++ M L + L L K ++ I+
Sbjct: 150 THILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETR--SIMR 207
Query: 189 DVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
+ +A+ FLH ++H D+KP N+LLD + + ++SDFG S
Sbjct: 208 SLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFS 247
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLG--IARDGKL---LAIKRL-DTFSLQTEREFQNELQILGGL 136
+F + V+G G GTV+ G I K+ +AIK L + S + +E +E ++ +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-----GNLVLKWSQRFEIIMDVA 191
+P + LLG C+ + L+ + MP L + + +L W + +A
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 128
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
K + +L D ++H D+ NVL+ + K++DFGL+++
Sbjct: 129 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 167
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLG--IARDGKL---LAIKRL-DTFSLQTEREFQNELQILGGL 136
+F + V+G G GTV+ G I K+ +AIK L + S + +E +E ++ +
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-----GNLVLKWSQRFEIIMDVA 191
+P + LLG C+ + L+ + MP L + + +L W + +A
Sbjct: 85 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 137
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
K + +L D ++H D+ NVL+ + K++DFGL+++
Sbjct: 138 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 176
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLG--IARDGKL---LAIKRL-DTFSLQTEREFQNELQILGGL 136
+F + V+G G GTV+ G I K+ +AIK L + S + +E +E ++ +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-----GNLVLKWSQRFEIIMDVA 191
+P + LLG C+ + L+ + MP L + + +L W + +A
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 131
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
K + +L D ++H D+ NVL+ + K++DFGL+++
Sbjct: 132 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 170
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 75
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K ++ + +I + + L+
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLK 135
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 136 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLG--IARDGKL---LAIKRL-DTFSLQTEREFQNELQILGGL 136
+F + V+G G GTV+ G I K+ +AIK L + S + +E +E ++ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-----GNLVLKWSQRFEIIMDVA 191
+P + LLG C+ + L+ + MP L + + +L W + +A
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 130
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
K + +L D ++H D+ NVL+ + K++DFGL+++
Sbjct: 131 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLG--IARDGKL---LAIKRL-DTFSLQTEREFQNELQILGGL 136
+F + V+G G GTV+ G I K+ +AIK L + S + +E +E ++ +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-----GNLVLKWSQRFEIIMDVA 191
+P + LLG C+ + L+ + MP L + + +L W + +A
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWC------VQIA 128
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
K + +L D ++H D+ NVL+ + K++DFGL+++
Sbjct: 129 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 167
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLG--IARDGKL---LAIKRL-DTFSLQTEREFQNELQILGGL 136
+F + V+G G GTV+ G I K+ +AIK L + S + +E +E ++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-----GNLVLKWSQRFEIIMDVA 191
+P + LLG C+ + L+ + MP L + + +L W + +A
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 127
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
K + +L D ++H D+ NVL+ + K++DFGL+++
Sbjct: 128 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 7/144 (4%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKR--LDTFSLQTEREFQNELQILGGLRSPFLVTLLGYC 148
+G+G G V+ G+++A+KR LD E+ +L L P +V+L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 149 MERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHG 208
LV+E+M K L+++L + L+ SQ + + + + H ++H
Sbjct: 89 HSERCLTLVFEFM-EKDLKKVL-DENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHR 143
Query: 209 DIKPSNVLLDSDCRGKVSDFGLSR 232
D+KP N+L++SD K++DFGL+R
Sbjct: 144 DLKPQNLLINSDGALKLADFGLAR 167
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 5/143 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G G G V++G +A+K L S+ + F E ++ L+ LV L +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 87
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I+ EYM N SL + L + + L ++ ++ +A+ + F+ + IH D+
Sbjct: 88 EPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 143
Query: 211 KPSNVLLDSDCRGKVSDFGLSRI 233
+ +N+L+ K++DFGL+R+
Sbjct: 144 RAANILVSDTLSCKIADFGLARL 166
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 12/157 (7%)
Query: 90 VIGKGGSGTVFLG--IARDGKLL--AIKRLDTFS-LQTEREFQNELQILGGLRSPFLVTL 144
VIG+G G V+ G + DGK + A+K L+ + + +F E I+ P +++L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 145 LGYCME-RNKRILVYEYMPNKSLQEMLFSDG-NLVLKWSQRFEIIMDVAKALEFLHFGCD 202
LG C+ ++V YM + L+ + ++ N +K F + VAK ++FL
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKFL---AS 152
Query: 203 PPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+H D+ N +LD KV+DFGL+R ++ EF
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEF 189
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 5/143 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G G G V++G +A+K L S+ + F E ++ L+ LV L +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I+ EYM N SL + L + + L ++ ++ +A+ + F+ + IH D+
Sbjct: 86 EPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 141
Query: 211 KPSNVLLDSDCRGKVSDFGLSRI 233
+ +N+L+ K++DFGL+R+
Sbjct: 142 RAANILVSDTLSCKIADFGLARL 164
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 7/144 (4%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKR--LDTFSLQTEREFQNELQILGGLRSPFLVTLLGYC 148
+G+G G V+ G+++A+KR LD E+ +L L P +V+L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 149 MERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHG 208
LV+E+M K L+++L + L+ SQ + + + + H ++H
Sbjct: 89 HSERCLTLVFEFM-EKDLKKVL-DENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHR 143
Query: 209 DIKPSNVLLDSDCRGKVSDFGLSR 232
D+KP N+L++SD K++DFGL+R
Sbjct: 144 DLKPQNLLINSDGALKLADFGLAR 167
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 85
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 145
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 146 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLG--IARDGKL---LAIKRL-DTFSLQTEREFQNELQILGGL 136
+F + V+G G GTV+ G I K+ +AIK L + S + +E +E ++ +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-----GNLVLKWSQRFEIIMDVA 191
+P + LLG C+ + L+ + MP L + + +L W + +A
Sbjct: 69 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 121
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
K + +L D ++H D+ NVL+ + K++DFGL+++
Sbjct: 122 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 160
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLG--IARDGKL---LAIKRL-DTFSLQTEREFQNELQILGGL 136
+F + V+G G GTV+ G I K+ +AIK L + S + +E +E ++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-----GNLVLKWSQRFEIIMDVA 191
+P + LLG C+ + L+ + MP L + + +L W + +A
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 127
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
K + +L D ++H D+ NVL+ + K++DFGL+++
Sbjct: 128 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLG--IARDGKL---LAIKRL-DTFSLQTEREFQNELQILGGL 136
+F + V+G G GTV+ G I K+ +AIK L + S + +E +E ++ +
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-----GNLVLKWSQRFEIIMDVA 191
+P + LLG C+ + L+ + MP L + + +L W + +A
Sbjct: 81 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 133
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
K + +L D ++H D+ NVL+ + K++DFGL+++
Sbjct: 134 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 172
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 5/143 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G G G V++G +A+K L S+ + F E ++ L+ LV L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I+ EYM N SL + L + + L ++ ++ +A+ + F+ + IH D+
Sbjct: 80 EPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 135
Query: 211 KPSNVLLDSDCRGKVSDFGLSRI 233
+ +N+L+ K++DFGL+R+
Sbjct: 136 RAANILVSDTLSCKIADFGLARL 158
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLG--IARDGKL---LAIKRL-DTFSLQTEREFQNELQILGGL 136
+F + V+G G GTV+ G I K+ +AIK L + S + +E +E ++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-----GNLVLKWSQRFEIIMDVA 191
+P + LLG C+ + L+ + MP L + + +L W + +A
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 129
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
K + +L D ++H D+ NVL+ + K++DFGL+++
Sbjct: 130 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 168
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 5/143 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G G G V++G +A+K L S+ + F E ++ L+ LV L +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I+ EYM N SL + L + + L ++ ++ +A+ + F+ + IH D+
Sbjct: 81 EPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 136
Query: 211 KPSNVLLDSDCRGKVSDFGLSRI 233
+ +N+L+ K++DFGL+R+
Sbjct: 137 RAANILVSDTLSCKIADFGLARL 159
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLG--IARDGKL---LAIKRL-DTFSLQTEREFQNELQILGGL 136
+F + V+G G GTV+ G I K+ +AIK L + S + +E +E ++ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-----GNLVLKWSQRFEIIMDVA 191
+P + LLG C+ + L+ + MP L + + +L W + +A
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 130
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
K + +L D ++H D+ NVL+ + K++DFGL+++
Sbjct: 131 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 5/143 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G G G V++G +A+K L S+ + F E ++ L+ LV L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I+ EYM N SL + L + + L ++ ++ +A+ + F+ + IH D+
Sbjct: 80 EPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 135
Query: 211 KPSNVLLDSDCRGKVSDFGLSRI 233
+ +N+L+ K++DFGL+R+
Sbjct: 136 RAANILVSDTLSCKIADFGLARL 158
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 89
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 90 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 149
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 150 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 183
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLG--IARDGKL---LAIKRL-DTFSLQTEREFQNELQILGGL 136
+F + V+G G GTV+ G I K+ +AIK L + S + +E +E ++ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-----GNLVLKWSQRFEIIMDVA 191
+P + LLG C+ + L+ + MP L + + +L W + +A
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 130
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
K + +L D ++H D+ NVL+ + K++DFGL+++
Sbjct: 131 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLG--IARDGKL---LAIKRL-DTFSLQTEREFQNELQILGGL 136
+F + V+G G GTV+ G I K+ +AIK L + S + +E +E ++ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-----GNLVLKWSQRFEIIMDVA 191
+P + LLG C+ + L+ + MP L + + +L W + +A
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 130
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
K + +L D ++H D+ NVL+ + K++DFGL+++
Sbjct: 131 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLG--IARDGKL---LAIKRL-DTFSLQTEREFQNELQILGGL 136
+F + V+G G GTV+ G I K+ +AIK L + S + +E +E ++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-----GNLVLKWSQRFEIIMDVA 191
+P + LLG C+ + L+ + MP L + + +L W + +A
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 127
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
K + +L D ++H D+ NVL+ + K++DFGL+++
Sbjct: 128 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 32/207 (15%)
Query: 53 LVNRSRTIPFDSNAPLKL-----QRFTYKEL---------KNATNDFDEANVIGKGGSGT 98
LV + + P ++N+ + L + F + +L K +++ + +G G G
Sbjct: 105 LVGKGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGE 164
Query: 99 VFLGIARDG-KLLAIKRLDT--FSLQTERE------FQNELQILGGLRSPFLVTLLGYCM 149
V L R K +AI+ + F++ + RE + E++IL L P ++ + +
Sbjct: 165 VKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-F 223
Query: 150 ERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGD 209
+ +V E M L + + GN LK + + A+++LH + +IH D
Sbjct: 224 DAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRD 278
Query: 210 IKPSNVLLDS---DCRGKVSDFGLSRI 233
+KP NVLL S DC K++DFG S+I
Sbjct: 279 LKPENVLLSSQEEDCLIKITDFGHSKI 305
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Query: 564 SRELSSTTSMR---GTLCYVAPEY----GGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S+ L T+ MR GT Y+APE G GY D +SLGV++ + +SG P
Sbjct: 303 SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGY-NRAVDCWSLGVILFICLSGYPPF 358
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 5/143 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G G G V++G +A+K L S+ + F E ++ L+ LV L +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I+ EYM N SL + L + + L ++ ++ +A+ + F+ + IH D+
Sbjct: 82 EPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 137
Query: 211 KPSNVLLDSDCRGKVSDFGLSRI 233
+ +N+L+ K++DFGL+R+
Sbjct: 138 RAANILVSDTLSCKIADFGLARL 160
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 20/169 (11%)
Query: 71 QRFTYKELKNATNDFDEANVIGKGGSGTVFLGIARDGKLLAIKRLDTFSLQ--TEREFQN 128
Q+ ELK+ +DF+ + +G G G V R L+ ++L ++ +
Sbjct: 6 QKAKVGELKD--DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIR 63
Query: 129 ELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRF---- 184
ELQ+L SP++V G + + E+M SL + VLK ++R
Sbjct: 64 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ--------VLKEAKRIPEEI 115
Query: 185 --EIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
++ + V + L +L ++H D+KPSN+L++S K+ DFG+S
Sbjct: 116 LGKVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVS 162
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 568 SSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S S GT Y+APE + ++DI+S+G+ ++ + GR P+
Sbjct: 168 SMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLG--IARDGKL---LAIKRL-DTFSLQTEREFQNELQILGGL 136
+F + V+G G GTV+ G I K+ +AIK L + S + +E +E ++ +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-----GNLVLKWSQRFEIIMDVA 191
+P + LLG C+ + L+ + MP L + + +L W + +A
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 134
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
K + +L D ++H D+ NVL+ + K++DFGL+++
Sbjct: 135 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 5/143 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G G G V++G +A+K L S+ + F E ++ L+ LV L +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I+ EYM N SL + L + + L ++ ++ +A+ + F+ + IH D+
Sbjct: 89 EPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 144
Query: 211 KPSNVLLDSDCRGKVSDFGLSRI 233
+ +N+L+ K++DFGL+R+
Sbjct: 145 RAANILVSDTLSCKIADFGLARL 167
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 79
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLG--IARDGKL---LAIKRL-DTFSLQTEREFQNELQILGGL 136
+F + V+G G GTV+ G I K+ +AIK L + S + +E +E ++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-----GNLVLKWSQRFEIIMDVA 191
+P + LLG C+ + L+ + MP L + + +L W + +A
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWC------VQIA 127
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
K + +L D ++H D+ NVL+ + K++DFGL+++
Sbjct: 128 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLG--IARDGKL---LAIKRL-DTFSLQTEREFQNELQILGGL 136
+F + V+G G GTV+ G I K+ +AIK L + S + +E +E ++ +
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-----GNLVLKWSQRFEIIMDVA 191
+P + LLG C+ + L+ + MP L + + +L W + +A
Sbjct: 100 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 152
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
K + +L D ++H D+ NVL+ + K++DFGL+++
Sbjct: 153 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 191
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 72/141 (51%), Gaps = 7/141 (4%)
Query: 91 IGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
IG+G +G V + + GK +A+K++D Q NE+ I+ +V + +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 150 ERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGD 209
++ +V E++ +L +++ + + Q + + V +AL +LH + VIH D
Sbjct: 113 VGDELWVVMEFLEGGALTDIV---THTRMNEEQIATVCLSVLRALSYLH---NQGVIHRD 166
Query: 210 IKPSNVLLDSDCRGKVSDFGL 230
IK ++LL SD R K+SDFG
Sbjct: 167 IKSDSILLTSDGRIKLSDFGF 187
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 72/142 (50%), Gaps = 5/142 (3%)
Query: 91 IGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G V+ ++ G L A K ++T S + ++ E++IL P++V LLG
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 150 ERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGD 209
K ++ E+ P ++ ++ + + L Q + + +AL FLH +IH D
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIML-ELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRD 134
Query: 210 IKPSNVLLDSDCRGKVSDFGLS 231
+K NVL+ + +++DFG+S
Sbjct: 135 LKAGNVLMTLEGDIRLADFGVS 156
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 565 RELSSTTSMRGTLCYVAPEYGGCGYLME-----KADIYSLGVLILVIVSGRRPLHVLASP 619
+ L S GT ++APE C + + KADI+SLG+ ++ + P H L +P
Sbjct: 161 KTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL-NP 219
Query: 620 MKL 622
M++
Sbjct: 220 MRV 222
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 79
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 28/185 (15%)
Query: 85 FDEANVIGKGGSGTVFLG-IARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVT 143
+ + VIG G G V+ + G+L+AIK++ LQ +R ELQI+ L +V
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 105
Query: 144 LLGYCMERNKRI------LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM------DVA 191
L + ++ LV +Y+P E ++ + Q +I +
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 160
Query: 192 KALEFLH-FGCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGEFGMDLFSQDLG 249
++L ++H FG + H DIKP N+LLD D K+ DFG ++ V GE +
Sbjct: 161 RSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 216
Query: 250 KSQEL 254
++ EL
Sbjct: 217 RAPEL 221
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 79 KNATNDFDEANVIGKGGSGTVFLGIARDG-KLLAIKRLDT--FSLQTERE------FQNE 129
K +++ + +G G G V L R K +AIK + F++ + RE + E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 130 LQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMD 189
++IL L P ++ + + + +V E M L + + GN LK +
Sbjct: 66 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQ 122
Query: 190 VAKALEFLHFGCDPPVIHGDIKPSNVLLDS---DCRGKVSDFGLSRI 233
+ A+++LH + +IH D+KP NVLL S DC K++DFG S+I
Sbjct: 123 MLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Query: 564 SRELSSTTSMR---GTLCYVAPEY----GGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S+ L T+ MR GT Y+APE G GY D +SLGV++ + +SG P
Sbjct: 164 SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGY-NRAVDCWSLGVILFICLSGYPPF 219
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 20/172 (11%)
Query: 83 NDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQTEREFQNEL---QILGGLRS 138
N+F+ ++GKG G V L + G+ A+K L + + E + L ++L R
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 139 PFLVTLLGYCMERNKRI-LVYEYMPNKSL-----QEMLFSDGNLVLKWSQRFEIIMDVAK 192
PFL T L Y + + R+ V EY L +E +FS+ RF ++
Sbjct: 211 PFL-TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDR------ARF-YGAEIVS 262
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEFGMDLF 244
AL++LH + V++ D+K N++LD D K++DFGL + ++ M F
Sbjct: 263 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF 312
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 79
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 20/172 (11%)
Query: 83 NDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQTEREFQNEL---QILGGLRS 138
N+F+ ++GKG G V L + G+ A+K L + + E + L ++L R
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 139 PFLVTLLGYCMERNKRI-LVYEYMPNKSL-----QEMLFSDGNLVLKWSQRFEIIMDVAK 192
PFL T L Y + + R+ V EY L +E +FS+ RF ++
Sbjct: 208 PFL-TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDR------ARF-YGAEIVS 259
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEFGMDLF 244
AL++LH + V++ D+K N++LD D K++DFGL + ++ M F
Sbjct: 260 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF 309
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 32/207 (15%)
Query: 53 LVNRSRTIPFDSNAPLKL-----QRFTYKEL---------KNATNDFDEANVIGKGGSGT 98
LV + + P ++N+ + L + F + +L K +++ + +G G G
Sbjct: 91 LVGKGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGE 150
Query: 99 VFLGIARDG-KLLAIKRLDT--FSLQTERE------FQNELQILGGLRSPFLVTLLGYCM 149
V L R K +AI+ + F++ + RE + E++IL L P ++ + +
Sbjct: 151 VKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-F 209
Query: 150 ERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGD 209
+ +V E M L + + GN LK + + A+++LH + +IH D
Sbjct: 210 DAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRD 264
Query: 210 IKPSNVLLDS---DCRGKVSDFGLSRI 233
+KP NVLL S DC K++DFG S+I
Sbjct: 265 LKPENVLLSSQEEDCLIKITDFGHSKI 291
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Query: 564 SRELSSTTSMR---GTLCYVAPEY----GGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S+ L T+ MR GT Y+APE G GY D +SLGV++ + +SG P
Sbjct: 289 SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGY-NRAVDCWSLGVILFICLSGYPPF 344
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 18/157 (11%)
Query: 85 FDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTERE------FQNELQILGGLR 137
+++ IG+G G VF RD G+++AIK+ L++E + E+++L L+
Sbjct: 5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF----LESEDDPVIKKIALREIRMLKQLK 60
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
P LV LL + + LV+EY + L E+ + + I +A+ F
Sbjct: 61 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVK--SITWQTLQAVNFC 118
Query: 198 H-FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
H C IH D+KP N+L+ K+ DFG +R+
Sbjct: 119 HKHNC----IHRDVKPENILITKHSVIKLCDFGFARL 151
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARDGKLL-AIKRLDTFSLQTEREFQNELQ----ILGGLR 137
+DF VIGKG G V L + ++ A+K L ++ ++E ++ + +L ++
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
PFLV L +K V +Y+ L L + L+ RF ++A AL +L
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE-RCFLEPRARF-YAAEIASALGYL 155
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVE 236
H +++ D+KP N+LLDS ++DFGL + +E
Sbjct: 156 H---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 75
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 135
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 136 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 79 KNATNDFDEANVIGKGGSGTVFLGIARDG-KLLAIKRLDT--FSLQTERE------FQNE 129
K +++ + +G G G V L R K +AIK + F++ + RE + E
Sbjct: 5 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 64
Query: 130 LQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMD 189
++IL L P ++ + + + +V E M L + + GN LK +
Sbjct: 65 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQ 121
Query: 190 VAKALEFLHFGCDPPVIHGDIKPSNVLLDS---DCRGKVSDFGLSRI 233
+ A+++LH + +IH D+KP NVLL S DC K++DFG S+I
Sbjct: 122 MLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 165
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Query: 564 SRELSSTTSMR---GTLCYVAPEY----GGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S+ L T+ MR GT Y+APE G GY D +SLGV++ + +SG P
Sbjct: 163 SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGY-NRAVDCWSLGVILFICLSGYPPF 218
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 79 KNATNDFDEANVIGKGGSGTVFLGIARDG-KLLAIKRLDT--FSLQTERE------FQNE 129
K +++ + +G G G V L R K +AIK + F++ + RE + E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 130 LQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMD 189
++IL L P ++ + + + +V E M L + + GN LK +
Sbjct: 66 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQ 122
Query: 190 VAKALEFLHFGCDPPVIHGDIKPSNVLLDS---DCRGKVSDFGLSRI 233
+ A+++LH + +IH D+KP NVLL S DC K++DFG S+I
Sbjct: 123 MLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Query: 564 SRELSSTTSMR---GTLCYVAPEY----GGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S+ L T+ MR GT Y+APE G GY D +SLGV++ + +SG P
Sbjct: 164 SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGY-NRAVDCWSLGVILFICLSGYPPF 219
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 28/185 (15%)
Query: 85 FDEANVIGKGGSGTVFLG-IARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVT 143
+ + VIG G G V+ + G+L+AIK++ LQ +R ELQI+ L +V
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 111
Query: 144 LLGYCMERNKRI------LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM------DVA 191
L + ++ LV +Y+P E ++ + Q +I +
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 166
Query: 192 KALEFLH-FGCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGEFGMDLFSQDLG 249
++L ++H FG + H DIKP N+LLD D K+ DFG ++ V GE +
Sbjct: 167 RSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 222
Query: 250 KSQEL 254
++ EL
Sbjct: 223 RAPEL 227
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 28/185 (15%)
Query: 85 FDEANVIGKGGSGTVFLG-IARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVT 143
+ + VIG G G V+ + G+L+AIK++ LQ +R ELQI+ L +V
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 115
Query: 144 LLGYCMERNKRI------LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM------DVA 191
L + ++ LV +Y+P E ++ + Q +I +
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 170
Query: 192 KALEFLH-FGCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGEFGMDLFSQDLG 249
++L ++H FG + H DIKP N+LLD D K+ DFG ++ V GE +
Sbjct: 171 RSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 226
Query: 250 KSQEL 254
++ EL
Sbjct: 227 RAPEL 231
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 90 VIGKGGSGTVFLG--IARDGKLL--AIKRLDTFS-LQTEREFQNELQILGGLRSPFLVTL 144
VIG+G G V+ G + DGK + A+K L+ + + +F E I+ P +++L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 145 LGYCME-RNKRILVYEYMPNKSLQEMLFSDG-NLVLKWSQRFEIIMDVAKALEFLHFGCD 202
LG C+ ++V YM + L+ + ++ N +K F + VAK ++FL
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKFL---AS 149
Query: 203 PPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+H D+ N +LD KV+DFGL+R + EF
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 186
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 28/185 (15%)
Query: 85 FDEANVIGKGGSGTVFLG-IARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVT 143
+ + VIG G G V+ + G+L+AIK++ LQ +R ELQI+ L +V
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 82
Query: 144 LLGYCMERNKRI------LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM------DVA 191
L + ++ LV +Y+P E ++ + Q +I +
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 137
Query: 192 KALEFLH-FGCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGEFGMDLFSQDLG 249
++L ++H FG + H DIKP N+LLD D K+ DFG ++ V GE +
Sbjct: 138 RSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 193
Query: 250 KSQEL 254
++ EL
Sbjct: 194 RAPEL 198
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 99
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 159
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 160 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 75
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 135
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 136 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 98
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 99 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 158
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 159 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 192
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 79 KNATNDFDEANVIGKGGSGTVFLGIARDG-KLLAIKRLDT--FSLQTERE------FQNE 129
K +++ + +G G G V L R K +AIK + F++ + RE + E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 130 LQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMD 189
++IL L P ++ + + + +V E M L + + GN LK +
Sbjct: 66 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQ 122
Query: 190 VAKALEFLHFGCDPPVIHGDIKPSNVLLDS---DCRGKVSDFGLSRI 233
+ A+++LH + +IH D+KP NVLL S DC K++DFG S+I
Sbjct: 123 MLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Query: 564 SRELSSTTSMR---GTLCYVAPEY----GGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S+ L T+ MR GT Y+APE G GY D +SLGV++ + +SG P
Sbjct: 164 SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGY-NRAVDCWSLGVILFICLSGYPPF 219
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 28/185 (15%)
Query: 85 FDEANVIGKGGSGTVFLG-IARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVT 143
+ + VIG G G V+ + G+L+AIK++ LQ +R ELQI+ L +V
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 113
Query: 144 LLGYCMERNKRI------LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM------DVA 191
L + ++ LV +Y+P E ++ + Q +I +
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 168
Query: 192 KALEFLH-FGCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGEFGMDLFSQDLG 249
++L ++H FG + H DIKP N+LLD D K+ DFG ++ V GE +
Sbjct: 169 RSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 224
Query: 250 KSQEL 254
++ EL
Sbjct: 225 RAPEL 229
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 90 VIGKGGSGTVFLG--IARDGKLL--AIKRLDTFS-LQTEREFQNELQILGGLRSPFLVTL 144
VIG+G G V+ G + DGK + A+K L+ + + +F E I+ P +++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 145 LGYCME-RNKRILVYEYMPNKSLQEMLFSDG-NLVLKWSQRFEIIMDVAKALEFLHFGCD 202
LG C+ ++V YM + L+ + ++ N +K F + VAK ++FL
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKFL---AS 151
Query: 203 PPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+H D+ N +LD KV+DFGL+R + EF
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 188
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 28/185 (15%)
Query: 85 FDEANVIGKGGSGTVFLG-IARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVT 143
+ + VIG G G V+ + G+L+AIK++ LQ +R ELQI+ L +V
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 111
Query: 144 LLGYCMERNKRI------LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM------DVA 191
L + ++ LV +Y+P E ++ + Q +I +
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 166
Query: 192 KALEFLH-FGCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGEFGMDLFSQDLG 249
++L ++H FG + H DIKP N+LLD D K+ DFG ++ V GE +
Sbjct: 167 RSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 222
Query: 250 KSQEL 254
++ EL
Sbjct: 223 RAPEL 227
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 90 VIGKGGSGTVFLG--IARDGKLL--AIKRLDTFS-LQTEREFQNELQILGGLRSPFLVTL 144
VIG+G G V+ G + DGK + A+K L+ + + +F E I+ P +++L
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 145 LGYCME-RNKRILVYEYMPNKSLQEMLFSDG-NLVLKWSQRFEIIMDVAKALEFLHFGCD 202
LG C+ ++V YM + L+ + ++ N +K F + VAK ++FL
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKFL---AS 156
Query: 203 PPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+H D+ N +LD KV+DFGL+R + EF
Sbjct: 157 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 193
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 90 VIGKGGSGTVFLG--IARDGKLL--AIKRLDTFS-LQTEREFQNELQILGGLRSPFLVTL 144
VIG+G G V+ G + DGK + A+K L+ + + +F E I+ P +++L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 145 LGYCME-RNKRILVYEYMPNKSLQEMLFSDG-NLVLKWSQRFEIIMDVAKALEFLHFGCD 202
LG C+ ++V YM + L+ + ++ N +K F + VAK ++FL
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKFL---AS 152
Query: 203 PPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+H D+ N +LD KV+DFGL+R + EF
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 189
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 79 KNATNDFDEANVIGKGGSGTVFLGIARDG-KLLAIKRLDT--FSLQTERE------FQNE 129
K +++ + +G G G V L R K +AIK + F++ + RE + E
Sbjct: 12 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 71
Query: 130 LQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMD 189
++IL L P ++ + + + +V E M L + + GN LK +
Sbjct: 72 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQ 128
Query: 190 VAKALEFLHFGCDPPVIHGDIKPSNVLLDS---DCRGKVSDFGLSRI 233
+ A+++LH + +IH D+KP NVLL S DC K++DFG S+I
Sbjct: 129 MLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 172
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Query: 564 SRELSSTTSMR---GTLCYVAPEY----GGCGYLMEKADIYSLGVLILVIVSGRRPL 613
S+ L T+ MR GT Y+APE G GY D +SLGV++ + +SG P
Sbjct: 170 SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGY-NRAVDCWSLGVILFICLSGYPPF 225
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 82 TNDFDEANVIGKGGSGTV-FLGIARDGKLLAIKRL-DTFSLQTEREFQNELQI-LGGLRS 138
+D + +G+G G V + G+++A+KR+ T + Q ++ +L I + +
Sbjct: 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDC 109
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEML--FSDGNLVLKWSQRFEIIMDVAKALEF 196
PF VT G + E M + SL + D + +I + + KALE
Sbjct: 110 PFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEH 168
Query: 197 LHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
LH VIH D+KPSNVL+++ + K+ DFG+S
Sbjct: 169 LHSKLS--VIHRDVKPSNVLINALGQVKMCDFGIS 201
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 28/185 (15%)
Query: 85 FDEANVIGKGGSGTVFLG-IARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVT 143
+ + VIG G G V+ + G+L+AIK++ LQ +R ELQI+ L +V
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 85
Query: 144 LLGYCMERNKRI------LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM------DVA 191
L + ++ LV +Y+P E ++ + Q +I +
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 140
Query: 192 KALEFLH-FGCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGEFGMDLFSQDLG 249
++L ++H FG + H DIKP N+LLD D K+ DFG ++ V GE +
Sbjct: 141 RSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 196
Query: 250 KSQEL 254
++ EL
Sbjct: 197 RAPEL 201
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 78 LKNATNDFDEANVIGKGGSGTVFLGIAR--DGKLLAIKRLDTFSLQTEREFQ---NELQI 132
+ + D++ IG G G I R DGK+L K LD S+ TE E Q +E+ +
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRC-QKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNL 58
Query: 133 LGGLRSPFLVTLLGYCMERNKRIL--VYEY--------MPNKSLQEMLFSDGNLVLKWSQ 182
L L+ P +V ++R L V EY + K +E + D VL+
Sbjct: 59 LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLR--- 115
Query: 183 RFEIIMDVAKALEFLHFGCD--PPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
++ + AL+ H D V+H D+KP+NV LD K+ DFGL+RI
Sbjct: 116 ---VMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 99
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 159
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 160 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 81/157 (51%), Gaps = 12/157 (7%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARDG-KLLAIKRLDTF--SLQTEREFQNELQILGGLRSP 139
++++ ++IG+G G V+L ++ K +AIK+++ L + E+ IL L+S
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 140 FLVTLLGYCMERN----KRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALE 195
+++ L + + + + + + L+++ + + L I+ ++ +
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTP--IFLTEQHVKTILYNLLLGEK 145
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
F+H + +IH D+KP+N LL+ DC K+ DFGL+R
Sbjct: 146 FIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 28/185 (15%)
Query: 85 FDEANVIGKGGSGTVFLG-IARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVT 143
+ + VIG G G V+ + G+L+AIK++ LQ +R ELQI+ L +V
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 90
Query: 144 LLGYCMERNKRI------LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM------DVA 191
L + ++ LV +Y+P E ++ + Q +I +
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 145
Query: 192 KALEFLH-FGCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGEFGMDLFSQDLG 249
++L ++H FG + H DIKP N+LLD D K+ DFG ++ V GE +
Sbjct: 146 RSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 201
Query: 250 KSQEL 254
++ EL
Sbjct: 202 RAPEL 206
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 15/157 (9%)
Query: 84 DFDEANVIGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQTEREF---QNELQILGGLR 137
DF ++G+G TV L AR+ + AIK L+ + E + E ++ L
Sbjct: 38 DFKFGKILGEGSFSTVVL--ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 95
Query: 138 SPFLVTLLGYCMERNKRILV-YEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEF 196
PF V L +C + ++++ Y N L + + G+ + RF ++ ALE+
Sbjct: 96 HPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCTRF-YTAEIVSALEY 152
Query: 197 LHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
LH +IH D+KP N+LL+ D +++DFG +++
Sbjct: 153 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 186
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 78/167 (46%), Gaps = 25/167 (14%)
Query: 84 DFDEANVIGKGGSGTVFLGIAR--DGKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
D++ IG G G I R DGK+L K LD S+ TE E Q +E+ +L L+
Sbjct: 7 DYEVLYTIGTGSYGRC-QKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELKH 64
Query: 139 PFLVTLLGYCMERNKRIL--VYEY--------MPNKSLQEMLFSDGNLVLKWSQRFEIIM 188
P +V ++R L V EY + K +E + D VL+ ++
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLR------VMT 118
Query: 189 DVAKALEFLHFGCD--PPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+ AL+ H D V+H D+KP+NV LD K+ DFGL+RI
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 31/158 (19%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V I R G+ +AIK+L R FQ+E+ R + LL +
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLS-------RPFQSEIFAKRAYRE---LLLLKHMQ 99
Query: 150 ERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---------RFE------IIMDVAKAL 194
N L+ + P SL+ F D LV+ + Q F ++ + K L
Sbjct: 100 HENVIGLLDVFTPASSLRN--FYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGL 157
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+++H V+H D+KP N+ ++ DC K+ DFGL+R
Sbjct: 158 KYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR 192
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 28/185 (15%)
Query: 85 FDEANVIGKGGSGTVFLG-IARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVT 143
+ + VIG G G V+ + G+L+AIK++ LQ +R ELQI+ L +V
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 96
Query: 144 LLGYCMERNKRI------LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM------DVA 191
L + ++ LV +Y+P E ++ + Q +I +
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 151
Query: 192 KALEFLH-FGCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGEFGMDLFSQDLG 249
++L ++H FG + H DIKP N+LLD D K+ DFG ++ V GE +
Sbjct: 152 RSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 207
Query: 250 KSQEL 254
++ EL
Sbjct: 208 RAPEL 212
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 28/185 (15%)
Query: 85 FDEANVIGKGGSGTVFLG-IARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVT 143
+ + VIG G G V+ + G+L+AIK++ LQ +R ELQI+ L +V
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 156
Query: 144 LLGYCMERNKRI------LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM------DVA 191
L + ++ LV +Y+P E ++ + Q +I +
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 211
Query: 192 KALEFLH-FGCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGEFGMDLFSQDLG 249
++L ++H FG + H DIKP N+LLD D K+ DFG ++ V GE +
Sbjct: 212 RSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 267
Query: 250 KSQEL 254
++ EL
Sbjct: 268 RAPEL 272
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 78 LKNATNDFDEANVIGKGGSGTVFLGIAR--DGKLLAIKRLDTFSLQTEREFQ---NELQI 132
+ + D++ IG G G I R DGK+L K LD S+ TE E Q +E+ +
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRC-QKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNL 58
Query: 133 LGGLRSPFLVTLLGYCMERNKRIL--VYEY--------MPNKSLQEMLFSDGNLVLKWSQ 182
L L+ P +V ++R L V EY + K +E + D VL+
Sbjct: 59 LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLR--- 115
Query: 183 RFEIIMDVAKALEFLHFGCD--PPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
++ + AL+ H D V+H D+KP+NV LD K+ DFGL+RI
Sbjct: 116 ---VMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 18/180 (10%)
Query: 85 FDEANVIGKGGSGTVFLG-IARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVT 143
+ + VIG G G V+ + G+L+AIK++ LQ +R ELQI+ L +V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 77
Query: 144 LLGYCMERN-KRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM------DVAKALEF 196
L + K+ +VY + + E ++ + Q +I + ++L +
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 197 LH-FGCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGEFGMDLFSQDLGKSQEL 254
+H FG + H DIKP N+LLD D K+ DFG ++ V GE + ++ EL
Sbjct: 138 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 90 VIGKGGSGTVFLG--IARDGKLL--AIKRLDTFS-LQTEREFQNELQILGGLRSPFLVTL 144
VIG+G G V+ G + DGK + A+K L+ + + +F E I+ P +++L
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 145 LGYCME-RNKRILVYEYMPNKSLQEMLFSDG-NLVLKWSQRFEIIMDVAKALEFLHFGCD 202
LG C+ ++V YM + L+ + ++ N +K F + VAK ++FL
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKFL---AS 210
Query: 203 PPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+H D+ N +LD KV+DFGL+R + EF
Sbjct: 211 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 247
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 86
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 146
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 147 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 90 VIGKGGSGTVFLG--IARDGKLL--AIKRLDTFS-LQTEREFQNELQILGGLRSPFLVTL 144
VIG+G G V+ G + DGK + A+K L+ + + +F E I+ P +++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 145 LGYCME-RNKRILVYEYMPNKSLQEMLFSDG-NLVLKWSQRFEIIMDVAKALEFLHFGCD 202
LG C+ ++V YM + L+ + ++ N +K F + VAK ++FL
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKFL---AS 151
Query: 203 PPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+H D+ N +LD KV+DFGL+R + EF
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 188
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 13/161 (8%)
Query: 79 KNATNDFDEANVIGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQTEREF---QNELQI 132
K DF ++G+G TV L AR+ + AIK L+ + E + E +
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVL--ARELATSREYAIKILEKRHIIKENKVPYVTRERDV 61
Query: 133 LGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
+ L PF V L + K Y N L + + G+ + RF ++
Sbjct: 62 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCTRF-YTAEIVS 119
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
ALE+LH +IH D+KP N+LL+ D +++DFG +++
Sbjct: 120 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 157
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 13/161 (8%)
Query: 79 KNATNDFDEANVIGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQTEREF---QNELQI 132
K DF ++G+G TV L AR+ + AIK L+ + E + E +
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVL--ARELATSREYAIKILEKRHIIKENKVPYVTRERDV 62
Query: 133 LGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
+ L PF V L + K Y N L + + G+ + RF ++
Sbjct: 63 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCTRF-YTAEIVS 120
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
ALE+LH +IH D+KP N+LL+ D +++DFG +++
Sbjct: 121 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 158
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 13/161 (8%)
Query: 79 KNATNDFDEANVIGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQTEREF---QNELQI 132
K DF ++G+G TV L AR+ + AIK L+ + E + E +
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVL--ARELATSREYAIKILEKRHIIKENKVPYVTRERDV 60
Query: 133 LGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
+ L PF V L + K Y N L + + G+ + RF ++
Sbjct: 61 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCTRF-YTAEIVS 118
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
ALE+LH +IH D+KP N+LL+ D +++DFG +++
Sbjct: 119 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 156
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 85
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 145
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 146 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 84
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 144
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 145 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 178
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 13/161 (8%)
Query: 79 KNATNDFDEANVIGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQTEREF---QNELQI 132
K DF ++G+G TV L AR+ + AIK L+ + E + E +
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVL--ARELATSREYAIKILEKRHIIKENKVPYVTRERDV 63
Query: 133 LGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
+ L PF V L + K Y N L + + G+ + RF ++
Sbjct: 64 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCTRF-YTAEIVS 121
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
ALE+LH +IH D+KP N+LL+ D +++DFG +++
Sbjct: 122 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 159
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 28/185 (15%)
Query: 85 FDEANVIGKGGSGTVFLG-IARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVT 143
+ + VIG G G V+ + G+L+AIK++ LQ +R ELQI+ L +V
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 89
Query: 144 LLGYCMERNKRI------LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM------DVA 191
L + ++ LV +Y+P E ++ + Q +I +
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 144
Query: 192 KALEFLH-FGCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGEFGMDLFSQDLG 249
++L ++H FG + H DIKP N+LLD D K+ DFG ++ V GE +
Sbjct: 145 RSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 200
Query: 250 KSQEL 254
++ EL
Sbjct: 201 RAPEL 205
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 78
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 79 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 138
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 139 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 172
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 8/149 (5%)
Query: 85 FDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLD-TFSLQTEREFQNELQILGGLRSPFLV 142
F + IGKG G VF GI R +++AIK +D + + Q E+ +L S ++
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 143 TLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCD 202
G ++ +K ++ EY+ S ++L + Q ++ ++ K L++LH
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGP---FDEFQIATMLKEILKGLDYLH---S 138
Query: 203 PPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
IH DIK +NVLL K++DFG++
Sbjct: 139 EKKIHRDIKAANVLLSEQGDVKLADFGVA 167
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 86
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 146
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 147 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 28/185 (15%)
Query: 85 FDEANVIGKGGSGTVFLG-IARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVT 143
+ + VIG G G V+ + G+L+AIK++ LQ +R ELQI+ L +V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 77
Query: 144 LLGYCMERNKRI------LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM------DVA 191
L + ++ LV +Y+P E ++ + Q +I +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 192 KALEFLH-FGCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGEFGMDLFSQDLG 249
++L ++H FG + H DIKP N+LLD D K+ DFG ++ V GE +
Sbjct: 133 RSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 188
Query: 250 KSQEL 254
++ EL
Sbjct: 189 RAPEL 193
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 79
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 79
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 86
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 146
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 147 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 85
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 145
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 146 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 86
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 146
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 147 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 28/185 (15%)
Query: 85 FDEANVIGKGGSGTVFLG-IARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVT 143
+ + VIG G G V+ + G+L+AIK++ LQ +R ELQI+ L +V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 77
Query: 144 LLGYCMERNKRI------LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM------DVA 191
L + ++ LV +Y+P E ++ + Q +I +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 192 KALEFLH-FGCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGEFGMDLFSQDLG 249
++L ++H FG + H DIKP N+LLD D K+ DFG ++ V GE +
Sbjct: 133 RSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 188
Query: 250 KSQEL 254
++ EL
Sbjct: 189 RAPEL 193
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 28/185 (15%)
Query: 85 FDEANVIGKGGSGTVFLG-IARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVT 143
+ + VIG G G V+ + G+L+AIK++ LQ +R ELQI+ L +V
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 89
Query: 144 LLGYCMERNKRI------LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM------DVA 191
L + ++ LV +Y+P E ++ + Q +I +
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 144
Query: 192 KALEFLH-FGCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGEFGMDLFSQDLG 249
++L ++H FG + H DIKP N+LLD D K+ DFG ++ V GE +
Sbjct: 145 RSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 200
Query: 250 KSQEL 254
++ EL
Sbjct: 201 RAPEL 205
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 79
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 79
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 79
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 28/185 (15%)
Query: 85 FDEANVIGKGGSGTVFLG-IARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVT 143
+ + VIG G G V+ + G+L+AIK++ LQ +R ELQI+ L +V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 77
Query: 144 LLGYCMERNKRI------LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM------DVA 191
L + ++ LV +Y+P E ++ + Q +I +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 192 KALEFLH-FGCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGEFGMDLFSQDLG 249
++L ++H FG + H DIKP N+LLD D K+ DFG ++ V GE +
Sbjct: 133 RSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 188
Query: 250 KSQEL 254
++ EL
Sbjct: 189 RAPEL 193
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 22/171 (12%)
Query: 78 LKNATNDFDEANVIGKGGSGTVFLGIARD----GKLLAIKRL------DTFSLQTEREFQ 127
L A ++ IG+G G VF ARD G+ +A+KR+ + L T RE
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFK--ARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 128 NELQILGGLRSPFLVTLLGYCM-----ERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ 182
L+ L P +V L C K LV+E++ ++ L L +
Sbjct: 64 V-LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTET 121
Query: 183 RFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+++ + + L+FLH V+H D+KP N+L+ S + K++DFGL+RI
Sbjct: 122 IKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARI 169
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 81
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 141
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 142 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 79
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 79
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLK 139
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 81
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 141
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 142 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFL-GIARDGKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ IG G G V L G A+K LD + ++ + NE +IL +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY+P + FS + ++S+ RF + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH D +I+ D+KP N+L+D KV+DFG ++ +V+G
Sbjct: 156 YLH-SLD--LIYRDLKPENLLIDQQGYIKVADFGFAK-RVKG 193
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFL-GIARDGKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ +G G G V L G A+K LD + +E + NE +IL +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY P + FS + ++S+ RF + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH D +I+ D+KP N+++D KV+DFGL++ +V+G
Sbjct: 156 YLH-SLD--LIYRDLKPENLMIDQQGYIKVTDFGLAK-RVKG 193
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G G G V++G +A+K L S+ + F E ++ L+ LV L +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I+ EYM N SL + L + + L ++ ++ +A+ + F+ + IH ++
Sbjct: 76 EPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRNL 131
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+ +N+L+ K++DFGL+R+ + E+
Sbjct: 132 RAANILVSDTLSCKIADFGLARLIEDNEY 160
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 81
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 141
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 142 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 79
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 28/185 (15%)
Query: 85 FDEANVIGKGGSGTVFLG-IARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVT 143
+ + VIG G G V+ + G+L+AIK++ LQ +R ELQI+ L +V
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 78
Query: 144 LLGYCMERNKRI------LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM------DVA 191
L + ++ LV +Y+P E ++ + Q +I +
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 133
Query: 192 KALEFLH-FGCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGEFGMDLFSQDLG 249
++L ++H FG + H DIKP N+LLD D K+ DFG ++ V GE +
Sbjct: 134 RSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 189
Query: 250 KSQEL 254
++ EL
Sbjct: 190 RAPEL 194
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 91
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 92 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 151
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 152 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 90
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 91 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 150
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 151 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 184
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 91
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 92 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 151
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 152 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 31/158 (19%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
IG G G V A D L +AIK+L R FQN+ R L+ + +
Sbjct: 70 IGSGAQGIV--CAAYDAVLDRNVAIKKL-------SRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 148 CMERNKRILVYEYMPNKSLQE-------MLFSDGNLV------LKWSQRFEIIMDVAKAL 194
+N L+ + P K+L+E M D NL L + ++ + +
Sbjct: 121 ---KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 177
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ LH +IH D+KPSN+++ SDC K+ DFGL+R
Sbjct: 178 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 20/160 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQTEREFQNEL---QILGGLRS 138
N+F+ ++GKG G V L + G+ A+K L + + E + L ++L R
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 139 PFLVTLLGYCMERNKRI-LVYEYMPNKSL-----QEMLFSDGNLVLKWSQRFEIIMDVAK 192
PFL T L Y + + R+ V EY L +E +FS+ ++ +
Sbjct: 69 PFL-TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE-------IVS 120
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
AL++LH + V++ D+K N++LD D K++DFGL +
Sbjct: 121 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 158
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 9/155 (5%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDT-FSLQTEREFQNELQILGGLRSP 139
D+D +G+G +G V L + R + +A+K +D ++ + E+ I L
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 140 FLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH- 198
+V G+ E N + L EY L + + D + +QRF + + +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG 122
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
G + H DIKP N+LLD K+SDFGL+ +
Sbjct: 123 IG----ITHRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 98
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 99 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 158
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 159 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 192
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 82 TNDFDEANVIGKGGSGTV-FLGIARDGKLLAIKRL-DTFSLQTEREFQNELQI-LGGLRS 138
+D + +G+G G V + G+++A+KR+ T + Q ++ +L I + +
Sbjct: 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDC 65
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEML--FSDGNLVLKWSQRFEIIMDVAKALEF 196
PF VT G + E M + SL + D + +I + + KALE
Sbjct: 66 PFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEH 124
Query: 197 LHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
LH VIH D+KPSNVL+++ + K+ DFG+S
Sbjct: 125 LHSKLS--VIHRDVKPSNVLINALGQVKMCDFGIS 157
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 84
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 144
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 145 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 178
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 79
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 75/160 (46%), Gaps = 35/160 (21%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
IG G G V A D L +AIK+L R FQN+ R L+ + +
Sbjct: 32 IGSGAQGIV--CAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVNH 82
Query: 148 CMERNKRILVYEYMPNKSLQEMLFSDGNLVLKW-----SQRFEIIMDVAK---------- 192
+N L+ + P KSL+E F D +V++ SQ ++ +D +
Sbjct: 83 ---KNIIGLLNVFTPQKSLEE--FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLC 137
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++ LH +IH D+KPSN+++ SDC K+ DFGL+R
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 76
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 77 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 136
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 137 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 170
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 73/179 (40%), Gaps = 32/179 (17%)
Query: 83 NDFDEANVIGKGGSGTVFLGIA------RDGKLLAIKRL-DTFSLQTEREFQNELQILGG 135
N+ + IG+G G VF A ++A+K L + S + +FQ E ++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 136 LRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEML----------------------FSD 173
+P +V LLG C L++EYM L E L S
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 174 GNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
G L +++ I VA + +L + +H D+ N L+ + K++DFGLSR
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSR 222
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 76
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 77 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 136
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 137 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 170
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 22/171 (12%)
Query: 78 LKNATNDFDEANVIGKGGSGTVFLGIARD----GKLLAIKRL------DTFSLQTEREFQ 127
L A ++ IG+G G VF ARD G+ +A+KR+ + L T RE
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFK--ARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 128 NELQILGGLRSPFLVTLLGYCM-----ERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ 182
L+ L P +V L C K LV+E++ ++ L L +
Sbjct: 64 V-LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTET 121
Query: 183 RFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+++ + + L+FLH V+H D+KP N+L+ S + K++DFGL+RI
Sbjct: 122 IKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARI 169
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 79
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 20/172 (11%)
Query: 83 NDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQTEREFQNEL---QILGGLRS 138
N+F+ ++GKG G V L + G+ A+K L + + E + L ++L R
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 139 PFLVTLLGYCMERNKRI-LVYEYMPNKSL-----QEMLFSDGNLVLKWSQRFEIIMDVAK 192
PFL T L Y + + R+ V EY L +E +FS+ ++ +
Sbjct: 68 PFL-TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE-------IVS 119
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEFGMDLF 244
AL++LH + V++ D+K N++LD D K++DFGL + ++ M F
Sbjct: 120 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF 169
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 28/185 (15%)
Query: 85 FDEANVIGKGGSGTVFLG-IARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVT 143
+ + VIG G G V+ + G+L+AIK++ LQ +R ELQI+ L +V
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVR 81
Query: 144 LLGYCMERNKRI------LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM------DVA 191
L + ++ LV +Y+P E ++ + Q +I +
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 136
Query: 192 KALEFLH-FGCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGEFGMDLFSQDLG 249
++L ++H FG + H DIKP N+LLD D K+ DFG ++ V GE +
Sbjct: 137 RSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 192
Query: 250 KSQEL 254
++ EL
Sbjct: 193 RAPEL 197
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 99
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 159
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 160 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 20/172 (11%)
Query: 83 NDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQTEREFQNEL---QILGGLRS 138
N+F+ ++GKG G V L + G+ A+K L + + E + L ++L R
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 139 PFLVTLLGYCMERNKRI-LVYEYMPNKSL-----QEMLFSDGNLVLKWSQRFEIIMDVAK 192
PFL T L Y + + R+ V EY L +E +FS+ ++ +
Sbjct: 70 PFL-TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE-------IVS 121
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEFGMDLF 244
AL++LH + V++ D+K N++LD D K++DFGL + ++ M F
Sbjct: 122 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF 171
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 75
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 135
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 136 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 77
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 78 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 137
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 138 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 171
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
IG G GTV+ G + + + + Q + F+NE+ +L R ++ +GY
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 78
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
+ + +V ++ SL L + + + +I A+ +++LH +IH D+
Sbjct: 79 KPQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDL 134
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIK 234
K +N+ L D K+ DFGL+ +K
Sbjct: 135 KSNNIFLHEDNTVKIGDFGLATVK 158
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLD--TFSLQTEREFQNELQILGGLRSPFLVTLLGYC 148
+G G G V++G + +A+K L T S+Q F E ++ L+ LV L
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA---FLEEANLMKTLQHDKLVRLYAVV 76
Query: 149 MERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHG 208
+ ++ E+M SL + L SD + + + +A+ + ++ IH
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHR 133
Query: 209 DIKPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
D++ +NVL+ K++DFGL+R+ + E+
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVIEDNEY 164
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ +G G G V L ++ G A+K LD + ++ + NE +IL +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY+P + FS + ++S+ RF + E
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH D +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 156 YLH-SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 193
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 102
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 103 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 162
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 163 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 196
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ +G G G V L ++ G A+K LD + ++ + NE +IL +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY+P + FS + ++S+ RF + E
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH D +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 156 YLH-SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 193
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 84 DFDEANVIGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQTEREF---QNELQILGGLR 137
DF ++G+G TV L AR+ + AIK L+ + E + E ++ L
Sbjct: 30 DFKFGKILGEGSFSTVVL--ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 87
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
PF V L + K Y N L + + G+ + RF ++ ALE+L
Sbjct: 88 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCTRF-YTAEIVSALEYL 145
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
H +IH D+KP N+LL+ D +++DFG +++
Sbjct: 146 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 178
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 22/171 (12%)
Query: 78 LKNATNDFDEANVIGKGGSGTVFLGIARD----GKLLAIKRL------DTFSLQTEREFQ 127
L A ++ IG+G G VF ARD G+ +A+KR+ + L T RE
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFK--ARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 128 NELQILGGLRSPFLVTLLGYCM-----ERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ 182
L+ L P +V L C K LV+E++ ++ L L +
Sbjct: 64 V-LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTET 121
Query: 183 RFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+++ + + L+FLH V+H D+KP N+L+ S + K++DFGL+RI
Sbjct: 122 IKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARI 169
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 84 DFDEANVIGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQTEREF---QNELQILGGLR 137
DF ++G+G TV L AR+ + AIK L+ + E + E ++ L
Sbjct: 30 DFKFGKILGEGSFSTVVL--ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 87
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
PF V L + K Y N L + + G+ + RF ++ ALE+L
Sbjct: 88 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCTRF-YTAEIVSALEYL 145
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
H +IH D+KP N+LL+ D +++DFG +++
Sbjct: 146 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 178
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 31/158 (19%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
IG G G V A D L +AIK+L R FQN+ R L+ + +
Sbjct: 70 IGSGAQGIV--CAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVNH 120
Query: 148 CMERNKRILVYEYMPNKSLQE-------MLFSDGNLV------LKWSQRFEIIMDVAKAL 194
+N L+ + P K+L+E M D NL L + ++ + +
Sbjct: 121 ---KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 177
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ LH +IH D+KPSN+++ SDC K+ DFGL+R
Sbjct: 178 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDT-FSLQTEREFQNELQILGGLRSP 139
D+D +G+G G V L + R + +A+K +D ++ + E+ I L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 140 FLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH- 198
+V G+ E N + L EY L + + D + +QRF + + +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG 122
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
G + H DIKP N+LLD K+SDFGL+ +
Sbjct: 123 IG----ITHRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 31/158 (19%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
IG G G V A D L +AIK+L R FQN+ R L+ + +
Sbjct: 32 IGSGAQGIV--CAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVNH 82
Query: 148 CMERNKRILVYEYMPNKSLQE-------MLFSDGNLV------LKWSQRFEIIMDVAKAL 194
+N L+ + P KSL+E M D NL L + ++ + +
Sbjct: 83 ---KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ LH +IH D+KPSN+++ SDC K+ DFGL+R
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 84 DFDEANVIGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQTEREF---QNELQILGGLR 137
DF ++G+G TV L AR+ + AIK L+ + E + E ++ L
Sbjct: 31 DFKFGKILGEGSFSTVVL--ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 88
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
PF V L + K Y N L + + G+ + RF ++ ALE+L
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCTRF-YTAEIVSALEYL 146
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
H +IH D+KP N+LL+ D +++DFG +++
Sbjct: 147 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 179
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 31/158 (19%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
IG G G V A D L +AIK+L R FQN+ R L+ + +
Sbjct: 26 IGSGAQGIV--CAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVNH 76
Query: 148 CMERNKRILVYEYMPNKSLQE-------MLFSDGNLV------LKWSQRFEIIMDVAKAL 194
+N L+ + P KSL+E M D NL L + ++ + +
Sbjct: 77 ---KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 133
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ LH +IH D+KPSN+++ SDC K+ DFGL+R
Sbjct: 134 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 84 DFDEANVIGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQTEREF---QNELQILGGLR 137
DF ++G+G TV L AR+ + AIK L+ + E + E ++ L
Sbjct: 31 DFKFGKILGEGSFSTVVL--ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 88
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
PF V L + K Y N L + + G+ + RF ++ ALE+L
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCTRF-YTAEIVSALEYL 146
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
H +IH D+KP N+LL+ D +++DFG +++
Sbjct: 147 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 179
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 84 DFDEANVIGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQTEREF---QNELQILGGLR 137
DF ++G+G TV L AR+ + AIK L+ + E + E ++ L
Sbjct: 31 DFKFGKILGEGSFSTVVL--ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 88
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
PF V L + K Y N L + + G+ + RF ++ ALE+L
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCTRF-YTAEIVSALEYL 146
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
H +IH D+KP N+LL+ D +++DFG +++
Sbjct: 147 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 179
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 31/158 (19%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
IG G G V A D L +AIK+L R FQN+ R L+ + +
Sbjct: 32 IGSGAQGIV--CAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVNH 82
Query: 148 CMERNKRILVYEYMPNKSLQE-------MLFSDGNLV------LKWSQRFEIIMDVAKAL 194
+N L+ + P KSL+E M D NL L + ++ + +
Sbjct: 83 ---KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ LH +IH D+KPSN+++ SDC K+ DFGL+R
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 31/158 (19%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
IG G G V A D L +AIK+L R FQN+ R L+ + +
Sbjct: 33 IGSGAQGIV--CAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVNH 83
Query: 148 CMERNKRILVYEYMPNKSLQE-------MLFSDGNLV------LKWSQRFEIIMDVAKAL 194
+N L+ + P K+L+E M D NL L + ++ + +
Sbjct: 84 ---KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 140
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ LH +IH D+KPSN+++ SDC K+ DFGL+R
Sbjct: 141 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ +G G G V L ++ G A+K LD + ++ + NE +IL +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY+P + FS + ++S+ RF + E
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH D +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 156 YLH-SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 193
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 84 DFDEANVIGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQTEREF---QNELQILGGLR 137
DF ++G+G TV L AR+ + AIK L+ + E + E ++ L
Sbjct: 15 DFKFGKILGEGSFSTVVL--ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 72
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
PF V L + K Y N L + + G+ + RF ++ ALE+L
Sbjct: 73 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCTRF-YTAEIVSALEYL 130
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
H +IH D+KP N+LL+ D +++DFG +++
Sbjct: 131 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 163
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 31/158 (19%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
IG G G V A D L +AIK+L R FQN+ R L+ + +
Sbjct: 32 IGSGAQGIV--CAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVNH 82
Query: 148 CMERNKRILVYEYMPNKSLQE-------MLFSDGNLV------LKWSQRFEIIMDVAKAL 194
+N L+ + P K+L+E M D NL L + ++ + +
Sbjct: 83 ---KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ LH +IH D+KPSN+++ SDC K+ DFGL+R
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDT-FSLQTEREFQNELQILGGLRSP 139
D+D +G+G G V L + R + +A+K +D ++ + E+ I L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 140 FLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH- 198
+V G+ E N + L EY L + + D + +QRF + + +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG 123
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
G + H DIKP N+LLD K+SDFGL+ +
Sbjct: 124 IG----ITHRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 84 DFDEANVIGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQTEREF---QNELQILGGLR 137
DF ++G+G TV L AR+ + AIK L+ + E + E ++ L
Sbjct: 33 DFKFGKILGEGSFSTVVL--ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 90
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
PF V L + K Y N L + + G+ + RF ++ ALE+L
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCTRF-YTAEIVSALEYL 148
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
H +IH D+KP N+LL+ D +++DFG +++
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 181
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 84 DFDEANVIGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQTEREF---QNELQILGGLR 137
DF ++G+G TV L AR+ + AIK L+ + E + E ++ L
Sbjct: 33 DFKFGKILGEGSFSTVVL--ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 90
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
PF V L + K Y N L + + G+ + RF ++ ALE+L
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCTRF-YTAEIVSALEYL 148
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
H +IH D+KP N+LL+ D +++DFG +++
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 181
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 31/158 (19%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
IG G G V A D L +AIK+L R FQN+ R L+ + +
Sbjct: 32 IGSGAQGIV--CAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVNH 82
Query: 148 CMERNKRILVYEYMPNKSLQE-------MLFSDGNLV------LKWSQRFEIIMDVAKAL 194
+N L+ + P KSL+E M D NL L + ++ + +
Sbjct: 83 ---KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ LH +IH D+KPSN+++ SDC K+ DFGL+R
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 31/158 (19%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
IG G G V A D L +AIK+L R FQN+ R L+ + +
Sbjct: 31 IGSGAQGIV--CAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVNH 81
Query: 148 CMERNKRILVYEYMPNKSLQE-------MLFSDGNLV------LKWSQRFEIIMDVAKAL 194
+N L+ + P K+L+E M D NL L + ++ + +
Sbjct: 82 ---KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 138
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ LH +IH D+KPSN+++ SDC K+ DFGL+R
Sbjct: 139 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 173
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDT-FSLQTEREFQNELQILGGLRSP 139
D+D +G+G G V L + R + +A+K +D ++ + E+ I L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 140 FLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH- 198
+V G+ E N + L EY L + + D + +QRF + + +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG 123
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
G + H DIKP N+LLD K+SDFGL+ +
Sbjct: 124 IG----ITHRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 84 DFDEANVIGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQTEREF---QNELQILGGLR 137
DF ++G+G TV L AR+ + AIK L+ + E + E ++ L
Sbjct: 33 DFKFGKILGEGSFSTVVL--ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 90
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
PF V L + K Y N L + + G+ + RF ++ ALE+L
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCTRF-YTAEIVSALEYL 148
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
H +IH D+KP N+LL+ D +++DFG +++
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 181
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 84 DFDEANVIGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQTEREF---QNELQILGGLR 137
DF ++G+G TV L AR+ + AIK L+ + E + E ++ L
Sbjct: 34 DFKFGKILGEGSFSTVVL--ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 91
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
PF V L + K Y N L + + G+ + RF ++ ALE+L
Sbjct: 92 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCTRF-YTAEIVSALEYL 149
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
H +IH D+KP N+LL+ D +++DFG +++
Sbjct: 150 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 182
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 31/158 (19%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
IG G G V A D L +AIK+L R FQN+ R L+ + +
Sbjct: 32 IGSGAQGIV--CAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVNH 82
Query: 148 CMERNKRILVYEYMPNKSLQE-------MLFSDGNLV------LKWSQRFEIIMDVAKAL 194
+N L+ + P K+L+E M D NL L + ++ + +
Sbjct: 83 ---KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ LH +IH D+KPSN+++ SDC K+ DFGL+R
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 84 DFDEANVIGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQTEREF---QNELQILGGLR 137
DF ++G+G TV L AR+ + AIK L+ + E + E ++ L
Sbjct: 34 DFKFGKILGEGSFSTVVL--ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 91
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
PF V L + K Y N L + + G+ + RF ++ ALE+L
Sbjct: 92 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCTRF-YTAEIVSALEYL 149
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
H +IH D+KP N+LL+ D +++DFG +++
Sbjct: 150 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 182
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 5/143 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G G G V++G +AIK L ++ E F E QI+ L+ LV L E
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPE-SFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I V EYM SL + L LK ++ VA + ++ IH D+
Sbjct: 76 EPIYI-VTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDL 131
Query: 211 KPSNVLLDSDCRGKVSDFGLSRI 233
+ +N+L+ + K++DFGL+R+
Sbjct: 132 RSANILVGNGLICKIADFGLARL 154
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDT-FSLQTEREFQNELQILGGLRSP 139
D+D +G+G G V L + R + +A+K +D ++ + E+ I L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 140 FLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH- 198
+V G+ E N + L EY L + + D + +QRF + + +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG 122
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
G + H DIKP N+LLD K+SDFGL+ +
Sbjct: 123 IG----ITHRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 84 DFDEANVIGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQTEREF---QNELQILGGLR 137
DF ++G+G TV L AR+ + AIK L+ + E + E ++ L
Sbjct: 33 DFKFGKILGEGSFSTVVL--ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 90
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
PF V L + K Y N L + + G+ + RF ++ ALE+L
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCTRF-YTAEIVSALEYL 148
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
H +IH D+KP N+LL+ D +++DFG +++
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 181
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 84 DFDEANVIGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQTEREF---QNELQILGGLR 137
DF ++G+G TV L AR+ + AIK L+ + E + E ++ L
Sbjct: 33 DFKFGKILGEGSFSTVVL--ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 90
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
PF V L + K Y N L + + G+ + RF ++ ALE+L
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCTRF-YTAEIVSALEYL 148
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
H +IH D+KP N+LL+ D +++DFG +++
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 181
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLG--IARDGKL---LAIKRL-DTFSLQTEREFQNELQILGGL 136
+F + V+G G GTV+ G I K+ +AIK L + S + +E +E ++ +
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-----GNLVLKWSQRFEIIMDVA 191
+P + LLG C+ + L+ + MP L + + +L W + +A
Sbjct: 72 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 124
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+ + +L D ++H D+ NVL+ + K++DFGL+++
Sbjct: 125 EGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 163
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 31/158 (19%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
IG G G V A D L +AIK+L R FQN+ R L+ + +
Sbjct: 33 IGSGAQGIV--CAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVNH 83
Query: 148 CMERNKRILVYEYMPNKSLQE-------MLFSDGNLV------LKWSQRFEIIMDVAKAL 194
+N L+ + P K+L+E M D NL L + ++ + +
Sbjct: 84 ---KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 140
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ LH +IH D+KPSN+++ SDC K+ DFGL+R
Sbjct: 141 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 31/158 (19%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
IG G G V A D L +AIK+L R FQN+ R L+ + +
Sbjct: 37 IGSGAQGIV--CAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVNH 87
Query: 148 CMERNKRILVYEYMPNKSLQE-------MLFSDGNLV------LKWSQRFEIIMDVAKAL 194
+N L+ + P KSL+E M D NL L + ++ + +
Sbjct: 88 ---KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 144
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ LH +IH D+KPSN+++ SDC K+ DFGL+R
Sbjct: 145 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 179
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 31/158 (19%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
IG G G V A D L +AIK+L R FQN+ R L+ + +
Sbjct: 26 IGSGAQGIV--CAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVNH 76
Query: 148 CMERNKRILVYEYMPNKSLQE-------MLFSDGNLV------LKWSQRFEIIMDVAKAL 194
+N L+ + P K+L+E M D NL L + ++ + +
Sbjct: 77 ---KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 133
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ LH +IH D+KPSN+++ SDC K+ DFGL+R
Sbjct: 134 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 31/158 (19%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
IG G G V A D L +AIK+L R FQN+ R L+ + +
Sbjct: 32 IGSGAQGIV--CAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVNH 82
Query: 148 CMERNKRILVYEYMPNKSLQE-------MLFSDGNLV------LKWSQRFEIIMDVAKAL 194
+N L+ + P KSL+E M D NL L + ++ + +
Sbjct: 83 ---KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ LH +IH D+KPSN+++ SDC K+ DFGL+R
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 31/158 (19%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
IG G G V A D L +AIK+L R FQN+ R L+ + +
Sbjct: 26 IGSGAQGIV--CAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVNH 76
Query: 148 CMERNKRILVYEYMPNKSLQE-------MLFSDGNLV------LKWSQRFEIIMDVAKAL 194
+N L+ + P K+L+E M D NL L + ++ + +
Sbjct: 77 ---KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 133
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ LH +IH D+KPSN+++ SDC K+ DFGL+R
Sbjct: 134 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 84 DFDEANVIGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQTEREF---QNELQILGGLR 137
DF ++G+G TV L AR+ + AIK L+ + E + E ++ L
Sbjct: 33 DFKFGKILGEGSFSTVVL--ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 90
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
PF V L + K Y N L + + G+ + RF ++ ALE+L
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFD-ETCTRF-YTAEIVSALEYL 148
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
H +IH D+KP N+LL+ D +++DFG +++
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 181
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 84 DFDEANVIGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQTEREF---QNELQILGGLR 137
DF ++G+G TV L AR+ + AIK L+ + E + E ++ L
Sbjct: 36 DFKFGKILGEGSFSTVVL--ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 93
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
PF V L + K Y N L + + G+ + RF ++ ALE+L
Sbjct: 94 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCTRF-YTAEIVSALEYL 151
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
H +IH D+KP N+LL+ D +++DFG +++
Sbjct: 152 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 184
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 31/158 (19%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
IG G G V A D L +AIK+L R FQN+ R L+ + +
Sbjct: 25 IGSGAQGIV--CAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVNH 75
Query: 148 CMERNKRILVYEYMPNKSLQE-------MLFSDGNLV------LKWSQRFEIIMDVAKAL 194
+N L+ + P K+L+E M D NL L + ++ + +
Sbjct: 76 ---KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 132
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ LH +IH D+KPSN+++ SDC K+ DFGL+R
Sbjct: 133 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 167
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Query: 84 DFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDT-FSLQTEREFQNELQILGGLRSPFL 141
D+D +G+G G V L + R + +A+K +D ++ + E+ I L +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 142 VTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH-FG 200
V G+ E N + L EY L + + D + +QRF + + +LH G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHGIG 124
Query: 201 CDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+ H DIKP N+LLD K+SDFGL+ +
Sbjct: 125 ----ITHRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 31/158 (19%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
IG G G V A D L +AIK+L R FQN+ R L+ + +
Sbjct: 33 IGSGAQGIV--CAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVNH 83
Query: 148 CMERNKRILVYEYMPNKSLQE-------MLFSDGNLV------LKWSQRFEIIMDVAKAL 194
+N L+ + P KSL+E M D NL L + ++ + +
Sbjct: 84 ---KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 140
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ LH +IH D+KPSN+++ SDC K+ DFGL+R
Sbjct: 141 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 31/158 (19%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
IG G G V A D L +AIK+L R FQN+ R L+ + +
Sbjct: 32 IGSGAQGIV--CAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVNH 82
Query: 148 CMERNKRILVYEYMPNKSLQE-------MLFSDGNLV------LKWSQRFEIIMDVAKAL 194
+N L+ + P KSL+E M D NL L + ++ + +
Sbjct: 83 ---KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ LH +IH D+KPSN+++ SDC K+ DFGL+R
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 9/162 (5%)
Query: 80 NATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQTEREFQNELQILGGLRS 138
N F V+G G VFL R GKL A+K + + +NE+ +L ++
Sbjct: 6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKH 65
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH 198
+VTL LV + + L + + G K + +I V A+++LH
Sbjct: 66 ENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL--VIQQVLSAVKYLH 123
Query: 199 FGCDPPVIHGDIKPSNVLL---DSDCRGKVSDFGLSRIKVEG 237
+ ++H D+KP N+L + + + ++DFGLS+++ G
Sbjct: 124 ---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG 162
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 5/144 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
IG G GTV+ G + I ++ + + + F+NE+ +L R ++ +GY M
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY-MT 102
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
++ +V ++ SL + L + Q +I A+ +++LH +IH D+
Sbjct: 103 KDNLAIVTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDM 158
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIK 234
K +N+ L K+ DFGL+ +K
Sbjct: 159 KSNNIFLHEGLTVKIGDFGLATVK 182
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ +G G G V L ++ G A+K LD + ++ + NE +IL +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY P + FS + ++S+ RF + E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 156
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH D +I+ D+KP N+++D KV+DFG ++ +V+G
Sbjct: 157 YLH-SLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK-RVKG 194
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 78/148 (52%), Gaps = 15/148 (10%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTERE-----FQNELQILGGLRSPFLVTLL 145
IG+G G V+ G+ A+K++ L+ E E E+ IL L+ +V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI---RLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 146 GYCMERNKRILVYEYMPNKSLQEML-FSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPP 204
+ + +LV+E++ ++ L+++L +G L ++ F ++ + + + H D
Sbjct: 67 DVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSF--LLQLLNGIAYCH---DRR 120
Query: 205 VIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
V+H D+KP N+L++ + K++DFGL+R
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ +G G G V L ++ G A+K LD + ++ + NE +IL +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY+P + FS + ++S+ RF + E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 156
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH D +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 157 YLH-SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 194
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ +G G G V L ++ G A+K LD + ++ + NE +IL +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY+P + FS + ++S+ RF + E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 156
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH D +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 157 YLH-SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 194
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 78/148 (52%), Gaps = 15/148 (10%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTERE-----FQNELQILGGLRSPFLVTLL 145
IG+G G V+ G+ A+K++ L+ E E E+ IL L+ +V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI---RLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 146 GYCMERNKRILVYEYMPNKSLQEML-FSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPP 204
+ + +LV+E++ ++ L+++L +G L ++ F ++ + + + H D
Sbjct: 67 DVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSF--LLQLLNGIAYCH---DRR 120
Query: 205 VIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
V+H D+KP N+L++ + K++DFGL+R
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 31/158 (19%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
IG G G V A D L +AIK+L R FQN+ R L+ + +
Sbjct: 34 IGSGAQGIV--CAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVNH 84
Query: 148 CMERNKRILVYEYMPNKSLQE-------MLFSDGNLV------LKWSQRFEIIMDVAKAL 194
+N L+ + P KSL+E M D NL L + ++ + +
Sbjct: 85 ---KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 141
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ LH +IH D+KPSN+++ SDC K+ DFGL+R
Sbjct: 142 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 176
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 78/148 (52%), Gaps = 15/148 (10%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTERE-----FQNELQILGGLRSPFLVTLL 145
IG+G G V+ G+ A+K++ L+ E E E+ IL L+ +V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI---RLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 146 GYCMERNKRILVYEYMPNKSLQEML-FSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPP 204
+ + +LV+E++ ++ L+++L +G L ++ F ++ + + + H D
Sbjct: 67 DVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSF--LLQLLNGIAYCH---DRR 120
Query: 205 VIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
V+H D+KP N+L++ + K++DFGL+R
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Query: 84 DFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDT-FSLQTEREFQNELQILGGLRSPFL 141
D+D +G+G G V L + R + +A+K +D ++ + E+ I L +
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 142 VTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH-FG 200
V G+ E N + L EY L + + D + +QRF + + +LH G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHGIG 125
Query: 201 CDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+ H DIKP N+LLD K+SDFGL+ +
Sbjct: 126 ----ITHRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ +G G G V L ++ G A+K LD + ++ + NE +IL +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY+P + FS + ++S+ RF + E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 156
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH D +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 157 YLH-SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 194
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 21/162 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLG--IARDGKL---LAIKRL-DTFSLQTEREFQNELQILGGL 136
+F + V+G G GTV+ G I K+ +AIK L + S + +E +E ++ +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-----GNLVLKWSQRFEIIMDVA 191
+P + LLG C+ + L+ + MP L + + +L W + +A
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 131
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
K + +L D ++H D+ NVL+ + K++DFG +++
Sbjct: 132 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 170
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 21/162 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLG--IARDGKL---LAIKRL-DTFSLQTEREFQNELQILGGL 136
+F + V+G G GTV+ G I K+ +AIK L + S + +E +E ++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-----GNLVLKWSQRFEIIMDVA 191
+P + LLG C+ + L+ + MP L + + +L W + +A
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 129
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
K + +L D ++H D+ NVL+ + K++DFG +++
Sbjct: 130 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 168
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ +G G G V L ++ G A+K LD + ++ + NE +IL +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY+P + FS + ++S+ RF + E
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 148
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH D +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 149 YLH-SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 186
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 50/208 (24%)
Query: 84 DFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLV 142
DF E +IG GG G VF R DGK IKR+ + + ERE ++ L L +V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE----VKALAKLDHVNIV 67
Query: 143 TLLGYCMERNKRILVYEYMPNKSLQ------------EMLFSDGNLVLKWSQR------- 183
G C + ++Y P S + +M F D + +W ++
Sbjct: 68 HYNG-CWDG------FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLD 120
Query: 184 ----FEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGL--------S 231
E+ + K ++++H +I+ D+KPSN+ L + K+ DFGL
Sbjct: 121 KVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK 177
Query: 232 RIKVEGEFGM----DLFSQDLGKSQELW 255
R + +G + SQD GK +L+
Sbjct: 178 RXRSKGTLRYMSPEQISSQDYGKEVDLY 205
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 24/112 (21%)
Query: 574 RGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRH 633
+GTL Y++PE ++ D+Y+LG+++ + LHV + + K
Sbjct: 182 KGTLRYMSPEQISSQDYGKEVDLYALGLILAEL------LHVCDTAFETSKF-------- 227
Query: 634 LAQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTPELRPDIGETVRIL 685
+L D + D ++K++ +L L L K PE RP+ E +R L
Sbjct: 228 ------FTDLRDGIISDIFDKKEKTLLQKL----LSKKPEDRPNTSEILRTL 269
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 79
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ D+GL+R
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLAR 173
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 21/162 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLG--IARDGKL---LAIKRL-DTFSLQTEREFQNELQILGGL 136
+F + V+ G GTV+ G I K+ +AIK L + S + +E +E ++ +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-----GNLVLKWSQRFEIIMDVA 191
+P + LLG C+ + L+ + MP L + + +L W + +A
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 134
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
K + +L D ++H D+ NVL+ + K++DFGL+++
Sbjct: 135 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 32/159 (20%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G V + R G +AIK+L R FQ+EL R + LL +
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKL-------YRPFQSELFAKRAYRE---LRLLKHMR 82
Query: 150 ERNKRILVYEYMPNKSLQEMLFSDGNLVLKW---------------SQRFE-IIMDVAKA 193
N L+ + P+++L + F+D LV+ + R + ++ + K
Sbjct: 83 HENVIGLLDVFTPDETLDD--FTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKG 140
Query: 194 LEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
L ++H +IH D+KP N+ ++ DC K+ DFGL+R
Sbjct: 141 LRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR 176
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 27/184 (14%)
Query: 85 FDEANVIGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTL 144
+ VIG G G VF + +AIK++ LQ +R ELQI+ ++ P +V L
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKV----LQDKRFKNRELQIMRIVKHPNVVDL 97
Query: 145 LGYCMERNKRI------LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM------DVAK 192
+ + LV EY+P E ++ K Q +++ + +
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVP-----ETVYRASRHYAKLKQTMPMLLIKLYMYQLLR 152
Query: 193 ALEFLH-FGCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGEFGMDLFSQDLGK 250
+L ++H G + H DIKP N+LLD K+ DFG ++I + GE + +
Sbjct: 153 SLAYIHSIG----ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYR 208
Query: 251 SQEL 254
+ EL
Sbjct: 209 APEL 212
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 79/152 (51%), Gaps = 14/152 (9%)
Query: 89 NVIGKGGSGTVFLGIARDG-KLLAIKRLDTF--SLQTEREFQNELQILGGLRSPFLVTLL 145
++IG+G G V+L ++ K +AIK+++ L + E+ IL L+S +++ L
Sbjct: 32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLY 91
Query: 146 GYC-----MERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFG 200
++ ++ +V E + + L+++ + + L I+ ++ F+H
Sbjct: 92 DLIIPDDLLKFDELYIVLE-IADSDLKKLFKTP--IFLTEEHIKTILYNLLLGENFIH-- 146
Query: 201 CDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ +IH D+KP+N LL+ DC KV DFGL+R
Sbjct: 147 -ESGIIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFL-GIARDGKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ +G G G V L G A+K LD + +E + NE +IL +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY P + FS + ++S+ RF + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH D +I+ D+KP N+++D +V+DFGL++ +V+G
Sbjct: 156 YLH-SLD--LIYRDLKPENLMIDQQGYIQVTDFGLAK-RVKG 193
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDT-FSLQTEREFQNELQILGGLRSP 139
D+D +G+G G V L + R + +A+K +D ++ + E+ I L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 140 FLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH- 198
+V G+ E N + L EY L + + D + +QRF + + +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG 122
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
G + H DIKP N+LLD K+SDFGL+ +
Sbjct: 123 IG----ITHRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDT-FSLQTEREFQNELQILGGLRSP 139
D+D +G+G G V L + R + +A+K +D ++ + E+ I L
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 140 FLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH- 198
+V G+ E N + L EY L + + D + +QRF + + +LH
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG 121
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
G + H DIKP N+LLD K+SDFGL+ +
Sbjct: 122 IG----ITHRDIKPENLLLDERDNLKISDFGLATV 152
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 21/162 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLG--IARDGKL---LAIKRL-DTFSLQTEREFQNELQILGGL 136
+F + V+G G GTV+ G I K+ +AIK L + S + +E +E ++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-----GNLVLKWSQRFEIIMDVA 191
+P + LLG C+ + L+ + MP L + + +L W + +A
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 129
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
K + +L D ++H D+ NVL+ + K++DFG +++
Sbjct: 130 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 168
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 10/159 (6%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ +G G G V L ++ G A+K LD + ++ + NE +IL +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH 198
PFLV L + + +V EY+P + L G ++ + + E+LH
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYA--AQIVLTFEYLH 151
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
D +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 152 -SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 186
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDT-FSLQTEREFQNELQILGGLRSP 139
D+D +G+G G V L + R + +A+K +D ++ + E+ I L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 140 FLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH- 198
+V G+ E N + L EY L + + D + +QRF + + +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG 122
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
G + H DIKP N+LLD K+SDFGL+ +
Sbjct: 123 IG----ITHRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDT-FSLQTEREFQNELQILGGLRSP 139
D+D +G+G G V L + R + +A+K +D ++ + E+ I L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 140 FLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH- 198
+V G+ E N + L EY L + + D + +QRF + + +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG 122
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
G + H DIKP N+LLD K+SDFGL+ +
Sbjct: 123 IG----ITHRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 21/162 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLG--IARDGKL---LAIKRL-DTFSLQTEREFQNELQILGGL 136
+F + V+ G GTV+ G I K+ +AIK L + S + +E +E ++ +
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-----GNLVLKWSQRFEIIMDVA 191
+P + LLG C+ + L+ + MP L + + +L W + +A
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 127
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
K + +L D ++H D+ NVL+ + K++DFGL+++
Sbjct: 128 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDT-FSLQTEREFQNELQILGGLRSP 139
D+D +G+G G V L + R + +A+K +D ++ + E+ I L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 140 FLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH- 198
+V G+ E N + L EY L + + D + +QRF + + +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG 122
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
G + H DIKP N+LLD K+SDFGL+ +
Sbjct: 123 IG----ITHRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 21/162 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLG--IARDGKL---LAIKRL-DTFSLQTEREFQNELQILGGL 136
+F + V+G G GTV+ G I K+ +AIK L + S + +E +E ++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-----GNLVLKWSQRFEIIMDVA 191
+P + LLG C+ + L+ + MP L + + +L W + +A
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 129
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
K + +L D ++H D+ NVL+ + K++DFG +++
Sbjct: 130 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 168
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDT-FSLQTEREFQNELQILGGLRSP 139
D+D +G+G G V L + R + +A+K +D ++ + E+ I L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 140 FLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH- 198
+V G+ E N + L EY L + + D + +QRF + + +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG 123
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
G + H DIKP N+LLD K+SDFGL+ +
Sbjct: 124 IG----ITHRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ +G G G V L ++ G A+K LD + ++ + NE +IL +
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY+P + FS + ++S+ RF + E
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 176
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH D +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 177 YLH-SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 214
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDT-FSLQTEREFQNELQILGGLRSP 139
D+D +G+G G V L + R + +A+K +D ++ + E+ I L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 140 FLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH- 198
+V G+ E N + L EY L + + D + +QRF + + +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG 122
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
G + H DIKP N+LLD K+SDFGL+ +
Sbjct: 123 IG----ITHRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDT-FSLQTEREFQNELQILGGLRSP 139
D+D +G+G G V L + R + +A+K +D ++ + E+ I L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 140 FLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH- 198
+V G+ E N + L EY L + + D + +QRF + + +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG 123
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
G + H DIKP N+LLD K+SDFGL+ +
Sbjct: 124 IG----ITHRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDT-FSLQTEREFQNELQILGGLRSP 139
D+D +G+G G V L + R + +A+K +D ++ + E+ I L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 140 FLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH- 198
+V G+ E N + L EY L + + D + +QRF + + +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG 123
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
G + H DIKP N+LLD K+SDFGL+ +
Sbjct: 124 IG----ITHRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDT-FSLQTEREFQNELQILGGLRSP 139
D+D +G+G G V L + R + +A+K +D ++ + E+ I L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 140 FLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH- 198
+V G+ E N + L EY L + + D + +QRF + + +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG 122
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
G + H DIKP N+LLD K+SDFGL+ +
Sbjct: 123 IG----ITHRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDT-FSLQTEREFQNELQILGGLRSP 139
D+D +G+G G V L + R + +A+K +D ++ + E+ I L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 140 FLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH- 198
+V G+ E N + L EY L + + D + +QRF + + +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG 123
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
G + H DIKP N+LLD K+SDFGL+ +
Sbjct: 124 IG----ITHRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDT-FSLQTEREFQNELQILGGLRSP 139
D+D +G+G G V L + R + +A+K +D ++ + E+ I L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 140 FLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH- 198
+V G+ E N + L EY L + + D + +QRF + + +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG 122
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
G + H DIKP N+LLD K+SDFGL+ +
Sbjct: 123 IG----ITHRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 21/162 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLG--IARDGKL---LAIKRL-DTFSLQTEREFQNELQILGGL 136
+F + V+G G GTV+ G I K+ +AIK L + S + +E +E ++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-----GNLVLKWSQRFEIIMDVA 191
+P + LLG C+ + L+ + MP L + + +L W + +A
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 127
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
K + +L D ++H D+ NVL+ + K++DFG +++
Sbjct: 128 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 166
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L + FQ+ I+ R+ + LL +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SKPFQS---IIHAKRTYRELRLLKHMK 91
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 92 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 151
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 152 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 21/162 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLG--IARDGKL---LAIKRL-DTFSLQTEREFQNELQILGGL 136
+F + V+ G GTV+ G I K+ +AIK L + S + +E +E ++ +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-----GNLVLKWSQRFEIIMDVA 191
+P + LLG C+ + L+ + MP L + + +L W + +A
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 134
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
K + +L D ++H D+ NVL+ + K++DFGL+++
Sbjct: 135 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 22/163 (13%)
Query: 89 NVIGKGGSGTVFLG----IARDGKLLAIKRLDTFS-LQTEREFQNELQILGGLRSPFLVT 143
VIGKG G V+ G A++ AIK L + +Q F E ++ GL P ++
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMD-------VAKALEF 196
L+G +L E +P+ L M D ++ QR + D VA+ +E+
Sbjct: 87 LIGI-------MLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEY 139
Query: 197 LHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
L + +H D+ N +LD KV+DFGL+R ++ E+
Sbjct: 140 L---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREY 179
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 21/162 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLG--IARDGKL---LAIKRL-DTFSLQTEREFQNELQILGGL 136
+F + V+G G GTV+ G I K+ +AI L + S + +E +E ++ +
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-----GNLVLKWSQRFEIIMDVA 191
+P + LLG C+ + L+ + MP L + + +L W + +A
Sbjct: 109 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 161
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
K + +L D ++H D+ NVL+ + K++DFGL+++
Sbjct: 162 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 200
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLS-------RPFQS---IIHAKRTYRELRLLKHMK 108
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P SL+E ++ +D N ++K + + +I + + L+
Sbjct: 109 HENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 168
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DFGL+R
Sbjct: 169 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 202
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 27/162 (16%)
Query: 85 FDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVT 143
+ + IG G G V G +A+K+L R FQN+ R +
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLS-------RPFQNQTHAKRAYRE---LV 75
Query: 144 LLGYCMERNKRILVYEYMPNKSLQE-------MLFSDGNLV------LKWSQRFEIIMDV 190
LL +N L+ + P K+L+E M D NL L + ++ +
Sbjct: 76 LLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQM 135
Query: 191 AKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++ LH +IH D+KPSN+++ SDC K+ DFGL+R
Sbjct: 136 LCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDT-FSLQTEREFQNELQILGGLRSP 139
D+D +G+G G V L + R + +A+K +D ++ + E+ I L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 140 FLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH- 198
+V G+ E N + L EY L + + D + +QRF + + +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG 122
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
G + H DIKP N+LLD K+SDFGL+ +
Sbjct: 123 IG----ITHRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 72/167 (43%), Gaps = 37/167 (22%)
Query: 85 FDEANVIGKGGSGTV------FLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRS 138
+ + IG G G V LGI +A+K+L R FQN+ R
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGIN-----VAVKKLS-------RPFQNQTHAKRAYRE 71
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQE-------MLFSDGNLV------LKWSQRFE 185
+ LL +N L+ + P K+L+E M D NL L +
Sbjct: 72 ---LVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSY 128
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++ + ++ LH +IH D+KPSN+++ SDC K+ DFGL+R
Sbjct: 129 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 172
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 21/162 (12%)
Query: 83 NDFDEANVIGKGGSGTVFLG--IARDGKL---LAIKRL-DTFSLQTEREFQNELQILGGL 136
+F + V+G G GTV+ G I K+ +AIK L + S + +E +E ++ +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-----GNLVLKWSQRFEIIMDVA 191
+P + LLG C+ + L+ + MP L + + +L W + +A
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 134
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
K + +L D ++H D+ NVL+ + K++DFG +++
Sbjct: 135 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 173
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDT-FSLQTEREFQNELQILGGLRSP 139
D+D +G+G G V L + R + +A+K +D ++ + E+ I L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 140 FLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH- 198
+V G+ E N + L EY L + + D + +QRF + + +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG 123
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
G + H DIKP N+LLD K+SDFGL+ +
Sbjct: 124 IG----ITHRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 14/156 (8%)
Query: 85 FDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQT--EREFQNELQILGGLRSPFL 141
+ + IG+G G V K+ +AIK++ F QT +R + E++IL R +
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLAFRHENI 85
Query: 142 V----TLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
+ + +E+ K + + + + L ++L + L + + + L+++
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 142
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
H V+H D+KPSN+LL++ C K+ DFGL+R+
Sbjct: 143 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 175
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 88/214 (41%), Gaps = 49/214 (22%)
Query: 84 DFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLV 142
DF E +IG GG G VF R DGK I+R+ + + ERE ++ L L +V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIV 68
Query: 143 TLLG------YCMERNKRIL-VYEYMPNKS-----------LQEMLFSDGNLVLKWSQR- 183
G Y E + L +Y P S +M F D + +W ++
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 184 ----------FEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGL--- 230
E+ + K ++++H +IH D+KPSN+ L + K+ DFGL
Sbjct: 129 RGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTS 185
Query: 231 -----SRIKVEGEFGM----DLFSQDLGKSQELW 255
R + +G + SQD GK +L+
Sbjct: 186 LKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLY 219
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 24/115 (20%)
Query: 571 TSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISW 630
T +GTL Y++PE ++ D+Y+LG+++ + LHV + + K
Sbjct: 193 TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL------LHVCDTAFETSKF----- 241
Query: 631 CRHLAQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTPELRPDIGETVRIL 685
+L D + D ++K++ +L L L K PE RP+ E +R L
Sbjct: 242 ---------FTDLRDGIISDIFDKKEKTLLQKL----LSKKPEDRPNTSEILRTL 283
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 85 FDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTER-EFQNELQILGGLRSPFLV 142
++ IG GG V L G+++AIK +D +L ++ + E++ L LR +
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHIC 71
Query: 143 TLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCD 202
L NK +V EY P L + + S L + ++ + + A+ ++H
Sbjct: 72 QLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV--VFRQIVSAVAYVH---S 126
Query: 203 PPVIHGDIKPSNVLLDSDCRGKVSDFGL 230
H D+KP N+L D + K+ DFGL
Sbjct: 127 QGYAHRDLKPENLLFDEYHKLKLIDFGL 154
Score = 35.8 bits (81), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 575 GTLCYVAPEY-GGCGYLMEKADIYSLGVLILVIVSGRRPL 613
G+L Y APE G YL +AD++S+G+L+ V++ G P
Sbjct: 171 GSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPF 210
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 35/160 (21%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
IG G G V A D L +AIK+L R FQN+ R L+ ++ +
Sbjct: 32 IGSGAQGIVVA--AYDAILERNVAIKKLS-------RPFQNQTHAKRAYRELVLMKVVNH 82
Query: 148 CMERNKRILVYEYMPNKSLQEMLFSDGNLVLKW-----SQRFEIIMDVAK---------- 192
+N L+ + P KSL+E F D +V++ SQ ++ +D +
Sbjct: 83 ---KNIIGLLNVFTPQKSLEE--FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLV 137
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++ LH +IH D+KPSN+++ SD K+ DFGL+R
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 11/163 (6%)
Query: 83 NDFDEANVIGKGGSGTVFLG-IARDGKLLAIKRLDTFSLQTER-EFQNELQILGGLRSPF 140
+D++ VIG G + V A + +AIKR++ QT E E+Q + P
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 141 LVTLLGYCMERNKRILVYEYMPNKSLQEML---FSDGNL---VLKWSQRFEIIMDVAKAL 194
+V+ + +++ LV + + S+ +++ + G VL S I+ +V + L
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
E+LH IH D+K N+LL D +++DFG+S G
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATG 174
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 59/131 (45%), Gaps = 25/131 (19%)
Query: 560 GDLFSRELSSTTSMRGTLCYVAPEYGGCGYLME-------KADIYSLGVLILVIVSGRRP 612
GD+ ++ T GT C++APE +ME KADI+S G+ + + +G P
Sbjct: 175 GDITRNKVRKT--FVGTPCWMAPE------VMEQVRGYDFKADIWSFGITAIELATGAAP 226
Query: 613 LHVLASPMKLEKANLISWCRHLAQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTP 672
H PMK+ L + L + D+ + Y K + I+L CLQK P
Sbjct: 227 YHKY-PPMKVLMLTLQNDPPSLETG-----VQDKEMLKKYGKSFRKM-ISL---CLQKDP 276
Query: 673 ELRPDIGETVR 683
E RP E +R
Sbjct: 277 EKRPTAAELLR 287
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 90 VIGKGGSGTVFLG--IARDGKLL--AIKRLDTFS-LQTEREFQNELQILGGLRSPFLVTL 144
VIG+G G V+ G + DGK + A+K L+ + + +F E I+ P +++L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 145 LGYCME-RNKRILVYEYMPNKSLQEMLFSDG-NLVLKWSQRFEIIMDVAKALEFLHFGCD 202
LG C+ ++V YM + L+ + ++ N +K F + VAK +++L
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKYL---AS 150
Query: 203 PPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+H D+ N +LD KV+DFGL+R + E+
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 187
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 69/162 (42%), Gaps = 34/162 (20%)
Query: 90 VIGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFL-------- 141
+IG+G G V+ G + D + +A+K FS + F NE I R P +
Sbjct: 20 LIGRGRYGAVYKG-SLDERPVAVK---VFSFANRQNFINEKNIY---RVPLMEHDNIARF 72
Query: 142 ------VTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALE 195
VT G R + +LV EY PN SL + L + W + V + L
Sbjct: 73 IVGDERVTADG----RMEYLLVMEYYPNGSLXKYLSLHTS---DWVSSCRLAHSVTRGLA 125
Query: 196 FLHFGC------DPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
+LH P + H D+ NVL+ +D +SDFGLS
Sbjct: 126 YLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS 167
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 22/161 (13%)
Query: 83 NDFDEANVIGKGGSGTVF-LGIARDGKLLAIKRLDTFSL---QTEREFQNELQILGGLRS 138
NDF +IG+GG G V+ A GK+ A+K LD + Q E NE +L + +
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 139 ---PFLVTLLGYCMERNKRILVYEYMPNKSL-----QEMLFSDGNLVLKWSQRFEIIMDV 190
PF+V + +K + + M L Q +FS+ ++ + EII+
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAA---EIIL-- 302
Query: 191 AKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
LE +H + V++ D+KP+N+LLD ++SD GL+
Sbjct: 303 --GLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA 338
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 22/161 (13%)
Query: 83 NDFDEANVIGKGGSGTVF-LGIARDGKLLAIKRLDTFSL---QTEREFQNELQILGGLRS 138
NDF +IG+GG G V+ A GK+ A+K LD + Q E NE +L + +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 139 ---PFLVTLLGYCMERNKRILVYEYMPNKSL-----QEMLFSDGNLVLKWSQRFEIIMDV 190
PF+V + +K + + M L Q +FS+ ++ + EII+
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAA---EIIL-- 303
Query: 191 AKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
LE +H + V++ D+KP+N+LLD ++SD GL+
Sbjct: 304 --GLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Query: 84 DFDEANVIGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQTEREF---QNELQILGGLR 137
DF ++G+G T L AR+ + AIK L+ + E + E ++ L
Sbjct: 31 DFKFGKILGEGSFSTTVL--ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 88
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
PF V L + K Y N L + + G+ + RF ++ ALE+L
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCTRF-YTAEIVSALEYL 146
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
H +IH D+KP N+LL+ D +++DFG +++
Sbjct: 147 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 179
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 11/163 (6%)
Query: 83 NDFDEANVIGKGGSGTVFLG-IARDGKLLAIKRLDTFSLQTER-EFQNELQILGGLRSPF 140
+D++ VIG G + V A + +AIKR++ QT E E+Q + P
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 141 LVTLLGYCMERNKRILVYEYMPNKSLQEML---FSDGNL---VLKWSQRFEIIMDVAKAL 194
+V+ + +++ LV + + S+ +++ + G VL S I+ +V + L
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
E+LH IH D+K N+LL D +++DFG+S G
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATG 169
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 59/131 (45%), Gaps = 25/131 (19%)
Query: 560 GDLFSRELSSTTSMRGTLCYVAPEYGGCGYLME-------KADIYSLGVLILVIVSGRRP 612
GD+ ++ T GT C++APE +ME KADI+S G+ + + +G P
Sbjct: 170 GDITRNKVRKT--FVGTPCWMAPE------VMEQVRGYDFKADIWSFGITAIELATGAAP 221
Query: 613 LHVLASPMKLEKANLISWCRHLAQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTP 672
H PMK+ L + L + D+ + Y K + I+L CLQK P
Sbjct: 222 YHKY-PPMKVLMLTLQNDPPSLETG-----VQDKEMLKKYGKSFRKM-ISL---CLQKDP 271
Query: 673 ELRPDIGETVR 683
E RP E +R
Sbjct: 272 EKRPTAAELLR 282
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 7/160 (4%)
Query: 83 NDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQT---EREFQNELQILGGLRS 138
N F + V+GKGG G V R GK+ A K+L+ ++ E NE QIL + S
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH 198
F+V+L ++ LV M L+ ++ G ++ ++ LE LH
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH 303
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGE 238
+++ D+KP N+LLD ++SD GL+ EG+
Sbjct: 304 ---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 340
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 79
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ DF L+R
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLAR 173
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 22/161 (13%)
Query: 83 NDFDEANVIGKGGSGTVF-LGIARDGKLLAIKRLDTFSL---QTEREFQNELQILGGLRS 138
NDF +IG+GG G V+ A GK+ A+K LD + Q E NE +L + +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 139 ---PFLVTLLGYCMERNKRILVYEYMPNKSL-----QEMLFSDGNLVLKWSQRFEIIMDV 190
PF+V + +K + + M L Q +FS+ ++ + EII+
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAA---EIIL-- 303
Query: 191 AKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
LE +H + V++ D+KP+N+LLD ++SD GL+
Sbjct: 304 --GLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 22/161 (13%)
Query: 83 NDFDEANVIGKGGSGTVF-LGIARDGKLLAIKRLDTFSL---QTEREFQNELQILGGLRS 138
NDF +IG+GG G V+ A GK+ A+K LD + Q E NE +L + +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 139 ---PFLVTLLGYCMERNKRILVYEYMPNKSL-----QEMLFSDGNLVLKWSQRFEIIMDV 190
PF+V + +K + + M L Q +FS+ ++ + EII+
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAA---EIIL-- 303
Query: 191 AKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
LE +H + V++ D+KP+N+LLD ++SD GL+
Sbjct: 304 --GLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 90 VIGKGGSGTVFLG--IARDGKLL--AIKRLDTFS-LQTEREFQNELQILGGLRSPFLVTL 144
VIG+G G V+ G + DGK + A+K L+ + + +F E I+ P +++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 145 LGYCME-RNKRILVYEYMPNKSLQEMLFSDG-NLVLKWSQRFEIIMDVAKALEFLHFGCD 202
LG C+ ++V YM + L+ + ++ N +K F + VAK +++L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKYL---AS 151
Query: 203 PPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+H D+ N +LD KV+DFGL+R + E+
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 188
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 9/146 (6%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTE-REFQNELQILGGLRSPFLVTLLG 146
+G G G+V G+ R K +AIK L + + + E E QI+ L +P++V L+G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 147 YCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVI 206
C + +LV E L + L + S E++ V+ +++L + +
Sbjct: 78 VC-QAEALMLVMEMAGGGPLHKFLVGKREEI-PVSNVAELLHQVSMGMKYLE---EKNFV 132
Query: 207 HGDIKPSNVLLDSDCRGKVSDFGLSR 232
H D+ NVLL + K+SDFGLS+
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSK 158
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 90 VIGKGGSGTVFLG--IARDGKLL--AIKRLDTFS-LQTEREFQNELQILGGLRSPFLVTL 144
VIG+G G V+ G + DGK + A+K L+ + + +F E I+ P +++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 145 LGYCME-RNKRILVYEYMPNKSLQEMLFSDG-NLVLKWSQRFEIIMDVAKALEFLHFGCD 202
LG C+ ++V YM + L+ + ++ N +K F + VAK +++L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKYL---AS 151
Query: 203 PPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+H D+ N +LD KV+DFGL+R + E+
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 188
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFL-GIARDGKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ +G G G V L G A+K LD + ++ + NE +IL +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY+P + FS + ++S+ RF + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH D +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 156 YLH-SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 193
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 7/160 (4%)
Query: 83 NDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQT---EREFQNELQILGGLRS 138
N F + V+GKGG G V R GK+ A K+L+ ++ E NE QIL + S
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH 198
F+V+L ++ LV M L+ ++ G ++ ++ LE LH
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH 303
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGE 238
+++ D+KP N+LLD ++SD GL+ EG+
Sbjct: 304 ---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 340
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFL-GIARDGKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ +G G G V L G A+K LD + ++ + NE +IL +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY+P + FS + ++S+ RF + E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 156
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH D +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 157 YLH-SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 194
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFL-GIARDGKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ +G G G V L G A+K LD + ++ + NE +IL +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY+P + FS + ++S+ RF + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH D +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 156 YLH-SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 193
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFL-GIARDGKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ +G G G V L G A+K LD + ++ + NE +IL +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY P + FS + ++S+ RF + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH D +I+ D+KP N+++D KV+DFG ++ +V+G
Sbjct: 156 YLH-SLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK-RVKG 193
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 90 VIGKGGSGTVFLG--IARDGKLL--AIKRLDTFS-LQTEREFQNELQILGGLRSPFLVTL 144
VIG+G G V+ G + DGK + A+K L+ + + +F E I+ P +++L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 145 LGYCME-RNKRILVYEYMPNKSLQEMLFSDG-NLVLKWSQRFEIIMDVAKALEFLHFGCD 202
LG C+ ++V YM + L+ + ++ N +K F + VAK +++L
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKYL---AS 149
Query: 203 PPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+H D+ N +LD KV+DFGL+R + E+
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 186
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 90 VIGKGGSGTVFLG--IARDGKLL--AIKRLDTFS-LQTEREFQNELQILGGLRSPFLVTL 144
VIG+G G V+ G + DGK + A+K L+ + + +F E I+ P +++L
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 145 LGYCME-RNKRILVYEYMPNKSLQEMLFSDG-NLVLKWSQRFEIIMDVAKALEFLHFGCD 202
LG C+ ++V YM + L+ + ++ N +K F + VAK +++L
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKYL---AS 146
Query: 203 PPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+H D+ N +LD KV+DFGL+R + E+
Sbjct: 147 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 183
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFL-GIARDGKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ +G G G V L G A+K LD + ++ + NE +IL +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY+P + FS + ++S+ RF + E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 156
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH D +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 157 YLH-SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 194
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFL-GIARDGKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ +G G G V L G A+K LD + ++ + NE +IL +
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY+P + FS + ++S+ RF + E
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 141
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH D +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 142 YLH-SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 179
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 14/147 (9%)
Query: 91 IGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQTE--REFQNELQILGGLRSPFLVTLL 145
IGKG V L AR GK +A+K +D L + ++ E++I+ L P +V L
Sbjct: 22 IGKGNFAKVKL--ARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 146 GYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ-RFEIIMDVAKALEFLHFGCDPP 204
LV EY + + L + G + K ++ +F + A+++ H
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCH---QKF 133
Query: 205 VIHGDIKPSNVLLDSDCRGKVSDFGLS 231
++H D+K N+LLD+D K++DFG S
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 575 GTLCYVAPE-YGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
G Y APE + G Y + D++SLGV++ +VSG P
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 14/147 (9%)
Query: 91 IGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQTE--REFQNELQILGGLRSPFLVTLL 145
IGKG V L AR GK +A+K +D L + ++ E++I+ L P +V L
Sbjct: 22 IGKGNFAKVKL--ARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 146 GYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ-RFEIIMDVAKALEFLHFGCDPP 204
LV EY + + L + G + K ++ +F + A+++ H
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCH---QKF 133
Query: 205 VIHGDIKPSNVLLDSDCRGKVSDFGLS 231
++H D+K N+LLD+D K++DFG S
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 575 GTLCYVAPE-YGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
G+ Y APE + G Y + D++SLGV++ +VSG P
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFL-GIARDGKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ +G G G V L G A+K LD + ++ + NE +IL +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY+P + FS + ++S+ RF + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH D +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 156 YLH-SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 193
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 90 VIGKGGSGTVFLG--IARDGKLL--AIKRLDTFS-LQTEREFQNELQILGGLRSPFLVTL 144
VIG+G G V+ G + DGK + A+K L+ + + +F E I+ P +++L
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 145 LGYCME-RNKRILVYEYMPNKSLQEMLFSDG-NLVLKWSQRFEIIMDVAKALEFLHFGCD 202
LG C+ ++V YM + L+ + ++ N +K F + VAK +++L
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKYL---AS 169
Query: 203 PPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+H D+ N +LD KV+DFGL+R + E+
Sbjct: 170 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 206
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 90 VIGKGGSGTVFLG--IARDGKLL--AIKRLDTFS-LQTEREFQNELQILGGLRSPFLVTL 144
VIG+G G V+ G + DGK + A+K L+ + + +F E I+ P +++L
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 145 LGYCME-RNKRILVYEYMPNKSLQEMLFSDG-NLVLKWSQRFEIIMDVAKALEFLHFGCD 202
LG C+ ++V YM + L+ + ++ N +K F + VAK +++L
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKYL---AS 148
Query: 203 PPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+H D+ N +LD KV+DFGL+R + E+
Sbjct: 149 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 185
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 90 VIGKGGSGTVFLG--IARDGKLL--AIKRLDTFS-LQTEREFQNELQILGGLRSPFLVTL 144
VIG+G G V+ G + DGK + A+K L+ + + +F E I+ P +++L
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 145 LGYCME-RNKRILVYEYMPNKSLQEMLFSDG-NLVLKWSQRFEIIMDVAKALEFLHFGCD 202
LG C+ ++V YM + L+ + ++ N +K F + VAK +++L
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKYL---AS 143
Query: 203 PPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+H D+ N +LD KV+DFGL+R + E+
Sbjct: 144 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 180
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 14/147 (9%)
Query: 91 IGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQTE--REFQNELQILGGLRSPFLVTLL 145
IGKG V L AR GK +A+K +D L + ++ E++I+ L P +V L
Sbjct: 22 IGKGNFAKVKL--ARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 146 GYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ-RFEIIMDVAKALEFLHFGCDPP 204
LV EY + + L + G + K ++ +F + A+++ H
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCH---QKF 133
Query: 205 VIHGDIKPSNVLLDSDCRGKVSDFGLS 231
++H D+K N+LLD+D K++DFG S
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 575 GTLCYVAPE-YGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
G+ Y APE + G Y + D++SLGV++ +VSG P
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 72/154 (46%), Gaps = 7/154 (4%)
Query: 79 KNATNDFDEANVIGK---GGSGTVFLGIARDGKLLA-IKRLDTFSLQTEREFQNELQILG 134
K++ DF + N + K SG ++ G + ++ + ++ +S + R+F E L
Sbjct: 3 KHSGIDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLR 62
Query: 135 GLRSPFLVTLLGYCME--RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
P ++ +LG C L+ +MP SL +L N V+ SQ + +D+A+
Sbjct: 63 IFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMAR 122
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVS 226
+ FLH +P + + +V++D D ++S
Sbjct: 123 GMAFLH-TLEPLIPRHALNSRSVMIDEDMTARIS 155
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 83 NDFDEANVIGKGGSGTVFL-GIARDGKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ +G G G V L G A+K LD + ++ + NE +IL +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH 198
PFLV L + + +V EY+P + L G ++ + + E+LH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYA--AQIVLTFEYLH 158
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
D +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 159 -SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 193
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ FD +G G G V L ++ G A+K LD + ++ + NE +IL +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH 198
PFLV L + + +V EY+ + L G ++ + + E+LH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYA--AQIVLTFEYLH 158
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 193
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 70/168 (41%), Gaps = 19/168 (11%)
Query: 83 NDFDEANVIGKGGSGTVF----LGIARDGKLL--AIKRLDTFSLQTERE-FQNELQILGG 135
N+ +G G G V G+ ++ +L A+K L + + E+E +EL+I+
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 136 L-RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKAL 194
L + +V LLG C +++ EY L L VL+ F I A
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSR-VLETDPAFAIANSTASTR 164
Query: 195 EFLHFGCDPP----------VIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ LHF IH D+ NVLL + K+ DFGL+R
Sbjct: 165 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 212
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 90 VIGKGGSGTVFLG--IARDGKLL--AIKRLDTFS-LQTEREFQNELQILGGLRSPFLVTL 144
VIG+G G V+ G + DGK + A+K L+ + + +F E I+ P +++L
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 145 LGYCME-RNKRILVYEYMPNKSLQEMLFSDG-NLVLKWSQRFEIIMDVAKALEFLHFGCD 202
LG C+ ++V YM + L+ + ++ N +K F + VAK +++L
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKYL---AS 170
Query: 203 PPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+H D+ N +LD KV+DFGL+R + E+
Sbjct: 171 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 207
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 83 NDFDEANVIGKGGSGTVFL-GIARDGKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ +G G G V L G A+K LD + ++ + NE +IL +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH 198
PFLV L + + +V EY+P + L G ++ + + E+LH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYA--AQIVLTFEYLH 158
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
D +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 159 -SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 193
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ FD +G G G V L ++ G A+K LD + ++ + NE +IL +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY+ + FS + ++S+ RF + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 193
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 35/160 (21%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
IG G G V A D L +AIK+L R FQN+ R L+ ++ +
Sbjct: 32 IGSGAQGIV--CAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYRELVLMKVVNH 82
Query: 148 CMERNKRILVYEYMPNKSLQEMLFSDGNLVLKW-----SQRFEIIMDVAK---------- 192
+N L+ + P KSL+E F D +V++ SQ ++ +D +
Sbjct: 83 ---KNIIGLLNVFTPQKSLEE--FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLC 137
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++ LH +IH D+KPSN+++ SD K+ DFGL+R
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Query: 127 QNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEI 186
+ E+ L LR P ++ L ++V EY L + + + +RF
Sbjct: 57 EREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRF-- 113
Query: 187 IMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+ A+E+ H ++H D+KP N+LLD + K++DFGLS I +G F
Sbjct: 114 FQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF 163
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ FD +G G G V L ++ G A+K LD + ++ + NE +IL +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY+ + FS + ++S+ RF + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH D +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 156 YLH-SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 193
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ FD +G G G V L ++ G A+K LD + ++ + NE +IL +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY+ + FS + ++S+ RF + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH D +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 156 YLH-SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 193
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ FD +G G G V L ++ G A+K LD + ++ + NE +IL +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY+ + FS + ++S+ RF + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 193
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ FD +G G G V L ++ G A+K LD + ++ + NE +IL +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY+ + FS + ++S+ RF + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 193
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 83 NDFDEANVIGKGGSGTVFL-GIARDGKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ +G G G V L G A+K LD + ++ + NE +IL +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH 198
PFLV L + + +V EY+P + L G ++ + + E+LH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYA--AQIVLTFEYLH 159
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
D +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 160 -SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 194
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ FD +G G G V L ++ G A+K LD + ++ + NE +IL +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY+ + FS + ++S+ RF + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH D +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 156 YLH-SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 193
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 5/141 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
IG G GTV+ G + + + + Q + F+NE+ +L R ++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 90
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
+ + +V ++ SL L + + + +I A+ +++LH +IH D+
Sbjct: 91 KPQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDL 146
Query: 211 KPSNVLLDSDCRGKVSDFGLS 231
K +N+ L D K+ DFGL+
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLA 167
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 14/156 (8%)
Query: 85 FDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQT--EREFQNELQILGGLRSPFL 141
+ + IG+G G V K+ +AIK++ F QT +R + E++IL R +
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 85
Query: 142 V----TLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
+ + +E+ K + + + + L ++L + L + + + L+++
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 142
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
H V+H D+KPSN+LL++ C K+ DFGL+R+
Sbjct: 143 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 175
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ FD +G G G V L ++ G A+K LD + ++ + NE +IL +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY+ + FS + ++S+ RF + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 193
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ FD +G G G V L ++ G A+K LD + ++ + NE +IL +
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY+ + FS + ++S+ RF + E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 156
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 157 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 194
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 14/150 (9%)
Query: 91 IGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQT--EREFQNELQILGGLRSPFLV----T 143
IG+G G V K+ +AIK++ F QT +R + E++IL R ++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 89
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
+ +E+ K + + + + L ++L + L + + + L+++H
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYIHSAN-- 144
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
V+H D+KPSN+LL++ C K+ DFGL+R+
Sbjct: 145 -VLHRDLKPSNLLLNTTCDLKICDFGLARV 173
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 14/156 (8%)
Query: 85 FDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQT--EREFQNELQILGGLRSPFL 141
+ + IG+G G V K +AIK++ F QT +R + E+QIL R +
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLR-EIQILLRFRHENV 103
Query: 142 V----TLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
+ L +E + + + + + L ++L S L + + + L+++
Sbjct: 104 IGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQ---LSNDHICYFLYQILRGLKYI 160
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
H V+H D+KPSN+L+++ C K+ DFGL+RI
Sbjct: 161 HSAN---VLHRDLKPSNLLINTTCDLKICDFGLARI 193
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ FD +G G G V L ++ G A+K LD + ++ + NE +IL +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY+ + FS + ++S+ RF + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 193
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ FD +G G G V L ++ G A+K LD + ++ + NE +IL +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY+ + FS + ++S+ RF + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 193
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 35/160 (21%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
IG G G V A D L +AIK+L R FQN+ R L+ ++ +
Sbjct: 32 IGSGAQGIV--CAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYRELVLMKVVNH 82
Query: 148 CMERNKRILVYEYMPNKSLQEMLFSDGNLVLKW-----SQRFEIIMDVAK---------- 192
+N L+ + P KSL+E F D +V++ SQ ++ +D +
Sbjct: 83 ---KNIIGLLNVFTPQKSLEE--FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLV 137
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++ LH +IH D+KPSN+++ SD K+ DFGL+R
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 16/165 (9%)
Query: 70 LQRFTYKELKNATNDFDEANVIGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTERE-FQN 128
L YKE+ + V+G+G G V R K +AIK++++ ++ER+ F
Sbjct: 3 LHMIDYKEI-------EVEEVVGRGAFGVVCKAKWR-AKDVAIKQIES---ESERKAFIV 51
Query: 129 ELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNL-VLKWSQRFEII 187
EL+ L + P +V L G C+ N LV EY SL +L L +
Sbjct: 52 ELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC 109
Query: 188 MDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLS 231
+ ++ + +LH +IH D+KP N+LL + K+ DFG +
Sbjct: 110 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA 154
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 57/123 (46%), Gaps = 19/123 (15%)
Query: 568 SSTTSMRGTLCYVAPE-YGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKAN 626
+ T+ +G+ ++APE + G Y EK D++S G+++ +++ R+P + P A
Sbjct: 159 THMTNNKGSAAWMAPEVFEGSNY-SEKCDVFSWGIILWEVITRRKPFDEIGGP-----AF 212
Query: 627 LISWCRHLAQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTPELRPDIGETVRILK 686
I W H +++ + + ++ +L C K P RP + E V+I+
Sbjct: 213 RIMWAVHNGTRPPLIKNLPKPIE------------SLMTRCWSKDPSQRPSMEEIVKIMT 260
Query: 687 GEM 689
M
Sbjct: 261 HLM 263
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 35/160 (21%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
IG G G V A D L +AIK+L R FQN+ R L+ ++ +
Sbjct: 32 IGSGAQGIV--CAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYRELVLMKVVNH 82
Query: 148 CMERNKRILVYEYMPNKSLQEMLFSDGNLVLKW-----SQRFEIIMDVAK---------- 192
+N L+ + P KSL+E F D +V++ SQ ++ +D +
Sbjct: 83 ---KNIIGLLNVFTPQKSLEE--FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLV 137
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++ LH +IH D+KPSN+++ SD K+ DFGL+R
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRL-DTFSLQTEREFQNELQILGGLRS 138
D + IG+G G+V + + G+++A+KR+ T + +++ +L ++ +RS
Sbjct: 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVV--MRS 77
Query: 139 ---PFLVTLLGYCMERNKRILVYEYMPNK--SLQEMLFSDGNLVLKWSQRFEIIMDVAKA 193
P++V G + E M + ++S + V+ +I + KA
Sbjct: 78 SDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKA 137
Query: 194 LEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
L H + +IH DIKPSN+LLD K+ DFG+S
Sbjct: 138 LN--HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGIS 173
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 10/159 (6%)
Query: 83 NDFDEANVIGKGGSGTVFL-GIARDGKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ +G G G V L G A+K LD + ++ + NE +IL +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH 198
PFLV L + + +V EY P + L G ++ + + E+LH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYA--AQIVLTFEYLH 158
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
D +I+ D+KP N+++D KV+DFG ++ +V+G
Sbjct: 159 -SLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK-RVKG 193
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 16/165 (9%)
Query: 70 LQRFTYKELKNATNDFDEANVIGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTERE-FQN 128
L YKE+ + V+G+G G V R K +AIK++++ ++ER+ F
Sbjct: 2 LHMIDYKEI-------EVEEVVGRGAFGVVCKAKWR-AKDVAIKQIES---ESERKAFIV 50
Query: 129 ELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNL-VLKWSQRFEII 187
EL+ L + P +V L G C+ N LV EY SL +L L +
Sbjct: 51 ELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC 108
Query: 188 MDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLS 231
+ ++ + +LH +IH D+KP N+LL + K+ DFG +
Sbjct: 109 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA 153
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 57/123 (46%), Gaps = 19/123 (15%)
Query: 568 SSTTSMRGTLCYVAPE-YGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKAN 626
+ T+ +G+ ++APE + G Y EK D++S G+++ +++ R+P + P A
Sbjct: 158 THMTNNKGSAAWMAPEVFEGSNY-SEKCDVFSWGIILWEVITRRKPFDEIGGP-----AF 211
Query: 627 LISWCRHLAQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTPELRPDIGETVRILK 686
I W H +++ + + ++ +L C K P RP + E V+I+
Sbjct: 212 RIMWAVHNGTRPPLIKNLPKPIE------------SLMTRCWSKDPSQRPSMEEIVKIMT 259
Query: 687 GEM 689
M
Sbjct: 260 HLM 262
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ FD +G G G V L ++ G A+K LD + ++ + NE +IL +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY+ + FS + ++S+ RF + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 193
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 13/177 (7%)
Query: 64 SNAPLK-LQRFTYKELKNATNDFDEANVIGKGGSGTVFLG-IARDGKLLAIKRLDTFSLQ 121
S++P + L L++ F+ ++G G G V+ G + G+L AIK +D
Sbjct: 4 SDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-D 62
Query: 122 TEREFQNELQILGGL-RSPFLVTLLGYCMERN------KRILVYEYMPNKSLQEMLFSDG 174
E E + E+ +L + T G +++N + LV E+ S+ +++ +
Sbjct: 63 EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK 122
Query: 175 NLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
LK I ++ + L LH VIH DIK NVLL + K+ DFG+S
Sbjct: 123 GNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVS 176
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 13/158 (8%)
Query: 83 NDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRL-DTFSLQT-EREFQNELQILGGLRSP 139
++++ IG G G V R G+ +AIK++ + F + T + EL+IL +
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 140 FLVTLLGYCME-----RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKAL 194
++ + K + V + L +++ S L L+ + F + + + L
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYF--LYQLLRGL 171
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+++H VIH D+KPSN+L++ +C K+ DFG++R
Sbjct: 172 KYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMAR 206
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ FD +G G G V L ++ G A+K LD + ++ + NE +IL +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH 198
PFLV L + + +V EY+ + L G ++ + + E+LH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYA--AQIVLTFEYLH 158
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 193
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ FD +G G G V L ++ G A+K LD + ++ + NE +IL +
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY+ + FS + ++S+ RF + E
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 142
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 143 YLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAK-RVKG 180
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 28/185 (15%)
Query: 85 FDEANVIGKGGSGTVFLG-IARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVT 143
+ + VIG G G V+ + G+L+AIK++ LQ + ELQI+ L +V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIVR 77
Query: 144 LLGYCMERNKRI------LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM------DVA 191
L + ++ LV +Y+P E ++ + Q +I +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 192 KALEFLH-FGCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGEFGMDLFSQDLG 249
++L ++H FG + H DIKP N+LLD D K+ DFG ++ V GE +
Sbjct: 133 RSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 188
Query: 250 KSQEL 254
++ EL
Sbjct: 189 RAPEL 193
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 5/142 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAI-KRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G V+ ++ +LA K +DT S + ++ E+ IL P +V LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 150 ERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGD 209
N ++ E+ ++ ++ + L SQ + AL +LH D +IH D
Sbjct: 105 YENNLWILIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRD 160
Query: 210 IKPSNVLLDSDCRGKVSDFGLS 231
+K N+L D K++DFG+S
Sbjct: 161 LKAGNILFTLDGDIKLADFGVS 182
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 12/150 (8%)
Query: 90 VIGKGGSGTVFLG--IARDGKLL--AIKRLDTFS-LQTEREFQNELQILGGLRSPFLVTL 144
VIG+G G V+ G + DGK + A+K L+ + + +F E I+ P +++L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 145 LGYCME-RNKRILVYEYMPNKSLQEMLFSDG-NLVLKWSQRFEIIMDVAKALEFLHFGCD 202
LG C+ ++V YM + L+ + ++ N +K F + VAK +++L
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMKYL---AS 150
Query: 203 PPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+H D+ N +LD KV+DFGL+R
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ FD +G G G V L ++ G A+K LD + ++ + NE +IL +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH 198
PFLV L + + +V EY+ + L G ++ + + E+LH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYA--AQIVLTFEYLH 158
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 193
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 68/146 (46%), Gaps = 6/146 (4%)
Query: 91 IGKGGSG-TVFLGIARDGKLLAIKRLDT--FSLQTEREFQNELQILGGLRSPFLVTLLGY 147
IG+G G + + DG+ IK ++ S + E + E+ +L ++ P +V
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 148 CMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIH 207
E +V +Y L + + + ++ + Q + + + AL+ +H D ++H
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILH 148
Query: 208 GDIKPSNVLLDSDCRGKVSDFGLSRI 233
DIK N+ L D ++ DFG++R+
Sbjct: 149 RDIKSQNIFLTKDGTVQLGDFGIARV 174
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ FD +G G G V L ++ G A+K LD + ++ + NE +IL +
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH 198
PFLV L + + +V EY+ + L G ++ + + E+LH
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYA--AQIVLTFEYLH 153
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 154 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 188
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 72/159 (45%), Gaps = 16/159 (10%)
Query: 85 FDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTF------SLQTEREFQNELQILGGLR 137
++ VIGKG V I R+ G+ A+K +D L TE + + E I L+
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTE-DLKREASICHMLK 84
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSL--QEMLFSDGNLVLKWSQRFEIIMDVAKALE 195
P +V LL +V+E+M L + + +D V + + + +AL
Sbjct: 85 HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDS---DCRGKVSDFGLS 231
+ H D +IH D+KP NVLL S K+ DFG++
Sbjct: 145 YCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVA 180
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 79
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ FGL+R
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLAR 173
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 5/142 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAI-KRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G V+ ++ +LA K +DT S + ++ E+ IL P +V LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 150 ERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGD 209
N ++ E+ ++ ++ + L SQ + AL +LH D +IH D
Sbjct: 105 YENNLWILIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRD 160
Query: 210 IKPSNVLLDSDCRGKVSDFGLS 231
+K N+L D K++DFG+S
Sbjct: 161 LKAGNILFTLDGDIKLADFGVS 182
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 28/185 (15%)
Query: 85 FDEANVIGKGGSGTVFLG-IARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVT 143
+ + VIG G G V+ + G+L+AIK++ LQ + ELQI+ L +V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIVR 77
Query: 144 LLGYCMERNKRI------LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM------DVA 191
L + ++ LV +Y+P E ++ + Q +I +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVP-----ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 192 KALEFLH-FGCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGEFGMDLFSQDLG 249
++L ++H FG + H DIKP N+LLD D K+ DFG ++ V GE +
Sbjct: 133 RSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 188
Query: 250 KSQEL 254
++ EL
Sbjct: 189 RAPEL 193
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 14/150 (9%)
Query: 91 IGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQT--EREFQNELQILGGLRSPFLV----T 143
IG+G G V K+ +AIK++ F QT +R + E++IL R ++
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 97
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
+ +E+ K + + + + L ++L + L + + + L+++H
Sbjct: 98 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYIHSAN-- 152
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
V+H D+KPSN+LL++ C K+ DFGL+R+
Sbjct: 153 -VLHRDLKPSNLLLNTTCDLKICDFGLARV 181
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 14/150 (9%)
Query: 91 IGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQT--EREFQNELQILGGLRSPFLV----T 143
IG+G G V K+ +AIK++ F QT +R + E++IL R ++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 89
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
+ +E+ K + + + + L ++L + L + + + L+++H
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYIHSAN-- 144
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
V+H D+KPSN+LL++ C K+ DFGL+R+
Sbjct: 145 -VLHRDLKPSNLLLNTTCDLKICDFGLARV 173
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 13/158 (8%)
Query: 83 NDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRL-DTFSLQT-EREFQNELQILGGLRSP 139
++++ IG G G V R G+ +AIK++ + F + T + EL+IL +
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 140 FLVTLLGYCME-----RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKAL 194
++ + K + V + L +++ S L L+ + F + + + L
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYF--LYQLLRGL 172
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+++H VIH D+KPSN+L++ +C K+ DFG++R
Sbjct: 173 KYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMAR 207
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ FD +G G G V L ++ G A+K LD + ++ + NE +IL +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH 198
PFLV L + + +V EY+ + L G ++ + + E+LH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYA--AQIVLTFEYLH 158
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 193
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ FD +G G G V L ++ G A+K LD + ++ + NE +IL +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY+ + FS + ++S+ RF + E
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 176
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 177 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 214
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 5/142 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAI-KRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G V+ ++ +LA K +DT S + ++ E+ IL P +V LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 150 ERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGD 209
N ++ E+ ++ ++ + L SQ + AL +LH D +IH D
Sbjct: 105 YENNLWILIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRD 160
Query: 210 IKPSNVLLDSDCRGKVSDFGLS 231
+K N+L D K++DFG+S
Sbjct: 161 LKAGNILFTLDGDIKLADFGVS 182
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ +G G G V L ++ G A+K LD + ++ + NE +I +
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY P + FS + ++S+ RF + E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 156
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH D +I+ D+KP N+L+D KV+DFG ++ +V+G
Sbjct: 157 YLH-SLD--LIYRDLKPENLLIDQQGYIKVADFGFAK-RVKG 194
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 7/152 (4%)
Query: 83 NDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFL 141
+ +D +G G G V R G A K + T + + E+Q + LR P L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 142 VTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGC 201
V L + N+ +++YE+M L E + + N + + E + V K L +H
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHMH--- 166
Query: 202 DPPVIHGDIKPSNVLLDSDCRG--KVSDFGLS 231
+ +H D+KP N++ + K+ DFGL+
Sbjct: 167 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLT 198
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 12/154 (7%)
Query: 84 DFDEANVIGKGGSGTVFLGIA-RDGKLLAIKRLD---TFSLQTEREFQNELQILGGLRSP 139
DF N++GKG V+ + G +AIK +D + + QNE++I L+ P
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 140 FLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQR--FEIIMDVAKALEFL 197
++ L Y + N LV E N + L N V +S+ + + + +L
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYL---KNRVKPFSENEARHFMHQIITGMLYL 128
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
H ++H D+ SN+LL + K++DFGL+
Sbjct: 129 H---SHGILHRDLTLSNLLLTRNMNIKIADFGLA 159
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 7/152 (4%)
Query: 83 NDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFL 141
+ +D +G G G V R G A K + T + + E+Q + LR P L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 142 VTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGC 201
V L + N+ +++YE+M L E + + N + + E + V K L +H
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHMH--- 272
Query: 202 DPPVIHGDIKPSNVLLDSDCRG--KVSDFGLS 231
+ +H D+KP N++ + K+ DFGL+
Sbjct: 273 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLT 304
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 14/156 (8%)
Query: 85 FDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQT--EREFQNELQILGGLRSPFL 141
+ + IG+G G V K+ +AIK++ F QT +R + E++IL R +
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 81
Query: 142 V----TLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
+ + +E+ K + + + + L ++L + L + + + L+++
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 138
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
H V+H D+KPSN+LL++ C K+ DFGL+R+
Sbjct: 139 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 171
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 14/150 (9%)
Query: 91 IGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQT--EREFQNELQILGGLRSPFLV----T 143
IG+G G V K+ +AIK++ F QT +R + E++IL R ++
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 87
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
+ +E+ K + + + + L ++L + L + + + L+++H
Sbjct: 88 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYIHSAN-- 142
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
V+H D+KPSN+LL++ C K+ DFGL+R+
Sbjct: 143 -VLHRDLKPSNLLLNTTCDLKICDFGLARV 171
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 67/129 (51%), Gaps = 7/129 (5%)
Query: 107 GKLLAIKRLDTFSLQTE-REFQNELQILGGLRSPFLVTLLGYCMER--NKRILVYEYMPN 163
G+ +A+K L S + + E++IL L +V G C E N L+ E++P+
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 164 KSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG 223
SL+E L + N + Q+ + + + K +++L +H D+ NVL++S+ +
Sbjct: 110 GSLKEYLPKNKNKI-NLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQV 165
Query: 224 KVSDFGLSR 232
K+ DFGL++
Sbjct: 166 KIGDFGLTK 174
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ FD +G G G V L ++ G A+K LD + ++ + NE +IL +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH 198
PFLV L + + +V EY+ + L G ++ + + E+LH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYA--AQIVLTFEYLH 179
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 180 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 214
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 74/150 (49%), Gaps = 17/150 (11%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
IG G GTV+ G + + + + Q + F+NE+ +L R ++ +GY
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 79
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEII--MDVAK----ALEFLHFGCDPP 204
+ + +V ++ SL L +++ +FE+I +D+A+ +++LH
Sbjct: 80 KPQLAIVTQWCEGSSLYHHL----HII---ETKFEMIKLIDIARQTAQGMDYLH---AKS 129
Query: 205 VIHGDIKPSNVLLDSDCRGKVSDFGLSRIK 234
+IH D+K +N+ L D K+ DFGL+ +K
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVK 159
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 14/156 (8%)
Query: 85 FDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQT--EREFQNELQILGGLRSPFL 141
+ + IG+G G V K+ +AIK++ F QT +R + E++IL R +
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 88
Query: 142 V----TLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
+ + +E+ K + + + + L ++L + L + + + L+++
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 145
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
H V+H D+KPSN+LL++ C K+ DFGL+R+
Sbjct: 146 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 178
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 14/156 (8%)
Query: 85 FDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQT--EREFQNELQILGGLRSPFL 141
+ + IG+G G V K+ +AIK++ F QT +R + E++IL R +
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 89
Query: 142 V----TLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
+ + +E+ K + + + + L ++L + L + + + L+++
Sbjct: 90 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 146
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
H V+H D+KPSN+LL++ C K+ DFGL+R+
Sbjct: 147 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 179
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 14/156 (8%)
Query: 85 FDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQT--EREFQNELQILGGLRSPFL 141
+ + IG+G G V K+ +AIK++ F QT +R + E++IL R +
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 80
Query: 142 V----TLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
+ + +E+ K + + + + L ++L + L + + + L+++
Sbjct: 81 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 137
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
H V+H D+KPSN+LL++ C K+ DFGL+R+
Sbjct: 138 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 170
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 14/156 (8%)
Query: 85 FDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQT--EREFQNELQILGGLRSPFL 141
+ + IG+G G V K+ +AIK++ F QT +R + E++IL R +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 87
Query: 142 V----TLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
+ + +E+ K + + + + L ++L + L + + + L+++
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 144
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
H V+H D+KPSN+LL++ C K+ DFGL+R+
Sbjct: 145 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 177
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 14/156 (8%)
Query: 85 FDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQT--EREFQNELQILGGLRSPFL 141
+ + IG+G G V K+ +AIK++ F QT +R + E++IL R +
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 103
Query: 142 V----TLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
+ + +E+ K + + + + L ++L + L + + + L+++
Sbjct: 104 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 160
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
H V+H D+KPSN+LL++ C K+ DFGL+R+
Sbjct: 161 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 193
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 14/150 (9%)
Query: 91 IGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQT--EREFQNELQILGGLRSPFLV----T 143
IG+G G V K+ +AIK++ F QT +R + E++IL R ++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 93
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
+ +E+ K + + + + L ++L + L + + + L+++H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
V+H D+KPSN+LL++ C K+ DFGL+R+
Sbjct: 149 -VLHRDLKPSNLLLNTTCDLKICDFGLARV 177
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 14/150 (9%)
Query: 91 IGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQT--EREFQNELQILGGLRSPFLV----T 143
IG+G G V K+ +AIK++ F QT +R + E++IL R ++
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 94
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
+ +E+ K + + + + L ++L + L + + + L+++H
Sbjct: 95 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYIHSAN-- 149
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
V+H D+KPSN+LL++ C K+ DFGL+R+
Sbjct: 150 -VLHRDLKPSNLLLNTTCDLKICDFGLARV 178
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 74/150 (49%), Gaps = 17/150 (11%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
IG G GTV+ G + + + + Q + F+NE+ +L R ++ +GY
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 76
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEII--MDVAK----ALEFLHFGCDPP 204
+ + +V ++ SL L +++ +FE+I +D+A+ +++LH
Sbjct: 77 KPQLAIVTQWCEGSSLYHHL----HII---ETKFEMIKLIDIARQTAQGMDYLH---AKS 126
Query: 205 VIHGDIKPSNVLLDSDCRGKVSDFGLSRIK 234
+IH D+K +N+ L D K+ DFGL+ +K
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGLATVK 156
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 79
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ D GL+R
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLAR 173
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 18/157 (11%)
Query: 91 IGKGGSGTVFLGIARD------GKLLAIKRL-DTFSLQTEREFQNELQILGGLRSPFLVT 143
+G+G G V+ G ARD +A+K + ++ SL+ EF NE ++ G +V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFS--------DGNLVLKWSQRFEIIMDVAKALE 195
LLG + ++V E M + L+ L S G + ++ ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+L+ +H D+ N ++ D K+ DFG++R
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 9/135 (6%)
Query: 107 GKLLAIKRL-DTFSLQTEREFQNELQILGGLRSPFLVTLLGYCMERNKRI--LVYEYMPN 163
G+++A+K L + Q +Q E++IL L +V G C ++ ++ LV EY+P
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 97
Query: 164 KSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG 223
SL++ L + +Q + + + +LH IH + NVLLD+D
Sbjct: 98 GSLRDYL---PRHCVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLV 151
Query: 224 KVSDFGLSRIKVEGE 238
K+ DFGL++ EG
Sbjct: 152 KIGDFGLAKAVPEGH 166
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 74/150 (49%), Gaps = 17/150 (11%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
IG G GTV+ G + + + + Q + F+NE+ +L R ++ +GY
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 79
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEII--MDVAK----ALEFLHFGCDPP 204
+ + +V ++ SL L +++ +FE+I +D+A+ +++LH
Sbjct: 80 KPQLAIVTQWCEGSSLYHHL----HII---ETKFEMIKLIDIARQTAQGMDYLH---AKS 129
Query: 205 VIHGDIKPSNVLLDSDCRGKVSDFGLSRIK 234
+IH D+K +N+ L D K+ DFGL+ +K
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVK 159
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 22/163 (13%)
Query: 81 ATNDFDEANVIGKGGSGTVFLG-IARDGKLLAIKRLDTFSLQTEREFQ---NELQILGGL 136
++F+ V+GKG G V L + G L A+K L + + + + E +IL
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 137 RS-PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFE------IIMD 189
R+ PFL L ++ V E++ L ++ S+RF+ +
Sbjct: 81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLM--------FHIQKSRRFDEARARFYAAE 132
Query: 190 VAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ AL FLH D +I+ D+K NVLLD + K++DFG+ +
Sbjct: 133 IISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK 172
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 18/157 (11%)
Query: 91 IGKGGSGTVFLGIARD------GKLLAIKRL-DTFSLQTEREFQNELQILGGLRSPFLVT 143
+G+G G V+ G ARD +A+K + ++ SL+ EF NE ++ G +V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFS--------DGNLVLKWSQRFEIIMDVAKALE 195
LLG + ++V E M + L+ L S G + ++ ++A +
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+L+ +H D+ N ++ D K+ DFG++R
Sbjct: 142 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 175
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 10/168 (5%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQ-TEREFQNELQIL 133
K+ ++ F+ +G G V L + GKL A+K + +L+ E +NE+ +L
Sbjct: 15 KQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVL 74
Query: 134 GGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKA 193
++ +V L N LV + + L + + G K + +I V A
Sbjct: 75 RKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAST--LIRQVLDA 132
Query: 194 LEFLHFGCDPPVIHGDIKPSNVLL---DSDCRGKVSDFGLSRIKVEGE 238
+ +LH ++H D+KP N+L D + + +SDFGLS+++ +G+
Sbjct: 133 VYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD 177
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 74/150 (49%), Gaps = 17/150 (11%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
IG G GTV+ G + + + + Q + F+NE+ +L R ++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 74
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEII--MDVAK----ALEFLHFGCDPP 204
+ + +V ++ SL L +++ +FE+I +D+A+ +++LH
Sbjct: 75 KPQLAIVTQWCEGSSLYHHL----HII---ETKFEMIKLIDIARQTAQGMDYLH---AKS 124
Query: 205 VIHGDIKPSNVLLDSDCRGKVSDFGLSRIK 234
+IH D+K +N+ L D K+ DFGL+ +K
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVK 154
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 91 IGKGGSGTVFLGIARD------GKLLAIKRL-DTFSLQTEREFQNELQILGGLRSPFLVT 143
+G+G G V+ G ARD +A+K + ++ SL+ EF NE ++ G +V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFS--------DGNLVLKWSQRFEIIMDVAKALE 195
LLG + ++V E M + L+ L S G + ++ ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+L+ +H D+ N ++ D K+ DFG++R E ++
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDY 185
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 14/147 (9%)
Query: 91 IGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQTE--REFQNELQILGGLRSPFLVTLL 145
IGKG V L AR GK +A++ +D L + ++ E++I+ L P +V L
Sbjct: 22 IGKGNFAKVKL--ARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 146 GYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ-RFEIIMDVAKALEFLHFGCDPP 204
LV EY + + L + G + K ++ +F + A+++ H
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCH---QKF 133
Query: 205 VIHGDIKPSNVLLDSDCRGKVSDFGLS 231
++H D+K N+LLD+D K++DFG S
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 575 GTLCYVAPE-YGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
G+ Y APE + G Y + D++SLGV++ +VSG P
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 67/129 (51%), Gaps = 7/129 (5%)
Query: 107 GKLLAIKRLDTFSLQTE-REFQNELQILGGLRSPFLVTLLGYCMER--NKRILVYEYMPN 163
G+ +A+K L S + + E++IL L +V G C E N L+ E++P+
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 164 KSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG 223
SL+E L + N + Q+ + + + K +++L +H D+ NVL++S+ +
Sbjct: 98 GSLKEYLPKNKNKI-NLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQV 153
Query: 224 KVSDFGLSR 232
K+ DFGL++
Sbjct: 154 KIGDFGLTK 162
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 18/157 (11%)
Query: 91 IGKGGSGTVFLGIARD------GKLLAIKRL-DTFSLQTEREFQNELQILGGLRSPFLVT 143
+G+G G V+ G ARD +A+K + ++ SL+ EF NE ++ G +V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFS--------DGNLVLKWSQRFEIIMDVAKALE 195
LLG + ++V E M + L+ L S G + ++ ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+L+ +H D+ N ++ D K+ DFG++R
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 5/141 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
IG G GTV+ G + + + + Q + F+NE+ +L R ++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 91
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
I V ++ SL L + + + +I A+ +++LH +IH D+
Sbjct: 92 PQLAI-VTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDL 146
Query: 211 KPSNVLLDSDCRGKVSDFGLS 231
K +N+ L D K+ DFGL+
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLA 167
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 14/147 (9%)
Query: 91 IGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQTE--REFQNELQILGGLRSPFLVTLL 145
IGKG V L AR GK +A++ +D L + ++ E++I+ L P +V L
Sbjct: 22 IGKGNFAKVKL--ARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 146 GYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ-RFEIIMDVAKALEFLHFGCDPP 204
LV EY + + L + G + K ++ +F + A+++ H
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCH---QKF 133
Query: 205 VIHGDIKPSNVLLDSDCRGKVSDFGLS 231
++H D+K N+LLD+D K++DFG S
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 575 GTLCYVAPE-YGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
G+ Y APE + G Y + D++SLGV++ +VSG P
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 91 IGKGGSGTVFLGIARD------GKLLAIKRL-DTFSLQTEREFQNELQILGGLRSPFLVT 143
+G+G G V+ G ARD +A+K + ++ SL+ EF NE ++ G +V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFS--------DGNLVLKWSQRFEIIMDVAKALE 195
LLG + ++V E M + L+ L S G + ++ ++A +
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+L+ +H D+ N ++ D K+ DFG++R E ++
Sbjct: 144 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDY 184
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 18/157 (11%)
Query: 91 IGKGGSGTVFLGIARD------GKLLAIKRL-DTFSLQTEREFQNELQILGGLRSPFLVT 143
+G+G G V+ G ARD +A+K + ++ SL+ EF NE ++ G +V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFS--------DGNLVLKWSQRFEIIMDVAKALE 195
LLG + ++V E M + L+ L S G + ++ ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+L+ +H D+ N ++ D K+ DFG++R
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 9/135 (6%)
Query: 107 GKLLAIKRL-DTFSLQTEREFQNELQILGGLRSPFLVTLLGYCMERNKRI--LVYEYMPN 163
G+++A+K L + Q +Q E++IL L +V G C ++ ++ LV EY+P
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 96
Query: 164 KSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG 223
SL++ L + +Q + + + +LH IH + NVLLD+D
Sbjct: 97 GSLRDYL---PRHCVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLV 150
Query: 224 KVSDFGLSRIKVEGE 238
K+ DFGL++ EG
Sbjct: 151 KIGDFGLAKAVPEGH 165
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ FD +G G G V L ++ G A+K LD + ++ + NE +IL +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY+ + FS + ++S+ RF + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH +I+ D+KP N+++D +V+DFG ++ +V+G
Sbjct: 156 YLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAK-RVKG 193
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 74/150 (49%), Gaps = 17/150 (11%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
IG G GTV+ G + + + + Q + F+NE+ +L R ++ +GY
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 101
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEII--MDVAK----ALEFLHFGCDPP 204
+ + +V ++ SL L +++ +FE+I +D+A+ +++LH
Sbjct: 102 KPQLAIVTQWCEGSSLYHHL----HII---ETKFEMIKLIDIARQTAQGMDYLHAKS--- 151
Query: 205 VIHGDIKPSNVLLDSDCRGKVSDFGLSRIK 234
+IH D+K +N+ L D K+ DFGL+ +K
Sbjct: 152 IIHRDLKSNNIFLHEDLTVKIGDFGLATVK 181
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 79
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ D GL+R
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLAR 173
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 74/150 (49%), Gaps = 17/150 (11%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
IG G GTV+ G + + + + Q + F+NE+ +L R ++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 102
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEII--MDVAK----ALEFLHFGCDPP 204
+ + +V ++ SL L +++ +FE+I +D+A+ +++LH
Sbjct: 103 KPQLAIVTQWCEGSSLYHHL----HII---ETKFEMIKLIDIARQTAQGMDYLH---AKS 152
Query: 205 VIHGDIKPSNVLLDSDCRGKVSDFGLSRIK 234
+IH D+K +N+ L D K+ DFGL+ +K
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATVK 182
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFL-GIARDGKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ +G G G V L G A+K LD + ++ + NE +IL +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY P + FS + ++S+ RF + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH D +I+ D+KP N+++D +V+DFG ++ +V+G
Sbjct: 156 YLH-SLD--LIYRDLKPENLMIDQQGYIQVTDFGFAK-RVKG 193
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 74/160 (46%), Gaps = 35/160 (21%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
IG G G V A D L +AIK+L R FQN+ R L+ + +
Sbjct: 32 IGSGAQGIV--CAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVNH 82
Query: 148 CMERNKRILVYEYMPNKSLQEMLFSDGNLVLKW-----SQRFEIIMDVAK---------- 192
+N L+ + P KSL+E F D +V++ SQ ++ +D +
Sbjct: 83 ---KNIIGLLNVFTPQKSLEE--FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLC 137
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++ LH +IH D+KPSN+++ SD K+ DFGL+R
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
IG G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 84
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 144
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ D K+ DFGL+R
Sbjct: 145 YIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR 178
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 76/169 (44%), Gaps = 14/169 (8%)
Query: 77 ELKNATNDFDEANVIGKGGSGTVFLG-IARDGKLLAIKRL--DTFSLQTEREFQN-ELQI 132
++K DF+ ++GKG G VFL + + AIK L D + + E E ++
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 133 LG-GLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRF--EIIMD 189
L PFL + + V EY+ L + S L + + EII+
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIIL- 130
Query: 190 VAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGE 238
L+FLH +++ D+K N+LLD D K++DFG+ + + G+
Sbjct: 131 ---GLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD 173
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 12/146 (8%)
Query: 91 IGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQTE--REFQNELQILGGLRSPFLVTLL 145
IGKG V L AR GK +A+K +D L + ++ E++I+ L P +V L
Sbjct: 15 IGKGNFAKVKL--ARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 72
Query: 146 GYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPV 205
LV EY + + L + G W + E + + + + +
Sbjct: 73 EVIETEKTLYLVMEYASGGEVFDYLVAHG-----WMKEKEARAKFRQIVSAVQYCHQKFI 127
Query: 206 IHGDIKPSNVLLDSDCRGKVSDFGLS 231
+H D+K N+LLD+D K++DFG S
Sbjct: 128 VHRDLKAENLLLDADMNIKIADFGFS 153
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 575 GTLCYVAPE-YGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
G+ Y APE + G Y + D++SLGV++ +VSG P
Sbjct: 167 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 206
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 31/158 (19%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
IG G G V A D L +AIK+L R FQN+ R + L+
Sbjct: 32 IGSGAQGIV--CAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYRE---LVLMKX 79
Query: 148 CMERNKRILVYEYMPNKSLQE-------MLFSDGNL--VLKWSQRFE----IIMDVAKAL 194
+N L+ + P K+L+E M D NL V++ E ++ + +
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGI 139
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ LH +IH D+KPSN+++ SD K+ DFGL+R
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 82 TNDFDEANVIGKGGSGTV-FLGIARDGKLLAIKRL-DTFSLQTEREFQNELQI-LGGLRS 138
+D + +G+G G V G++ A+KR+ T + Q ++ +L I +
Sbjct: 33 ADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDC 92
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEML--FSDGNLVLKWSQRFEIIMDVAKALEF 196
PF VT G + R + + + + SL + D + +I + + KALE
Sbjct: 93 PFTVTFYG-ALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEH 151
Query: 197 LHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
LH VIH D+KPSNVL+++ + K DFG+S
Sbjct: 152 LHSKLS--VIHRDVKPSNVLINALGQVKXCDFGIS 184
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 79
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ DC K+ D GL+R
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLAR 173
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 14/156 (8%)
Query: 85 FDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQT--EREFQNELQILGGLRSPFL 141
+ + IG+G G V K+ +AIK++ F QT +R + E++IL R +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 87
Query: 142 V----TLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
+ + +E+ K + + + + L ++L L + + + L+++
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQH---LSNDHICYFLYQILRGLKYI 144
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
H V+H D+KPSN+LL++ C K+ DFGL+R+
Sbjct: 145 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 177
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 14/147 (9%)
Query: 91 IGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQ--TEREFQNELQILGGLRSPFLVTLL 145
IGKG V L AR G+ +AIK +D L + ++ E++I+ L P +V L
Sbjct: 23 IGKGNFAKVKL--ARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 146 GYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ-RFEIIMDVAKALEFLHFGCDPP 204
L+ EY + + L + G + K ++ +F + A+++ H
Sbjct: 81 EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QIVSAVQYCH---QKR 134
Query: 205 VIHGDIKPSNVLLDSDCRGKVSDFGLS 231
++H D+K N+LLD+D K++DFG S
Sbjct: 135 IVHRDLKAENLLLDADMNIKIADFGFS 161
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 575 GTLCYVAPE-YGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
G Y APE + G Y + D++SLGV++ +VSG P
Sbjct: 175 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 85
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 145
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ D K+ DFGL+R
Sbjct: 146 YIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLAR 179
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 30/158 (18%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 79
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE------IIMDVAKAL 194
N L+ + P +SL+E ++ +D N ++K SQ+ +I + + L
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-SQKLTDDHVQFLIYQILRGL 138
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+++H +IH D+KPSN+ ++ D K+ DFGL R
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCR 173
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 10/176 (5%)
Query: 63 DSNAPLKLQRFTYKELKNATND-FDEANVIGKGGSGTVF-LGIARDGKLLAIKRLDTFSL 120
DS L+ ++ + E + D F + V+G+GG G VF + GKL A K+L+ L
Sbjct: 164 DSKYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRL 223
Query: 121 QTEREFQN---ELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFS--DGN 175
+ + +Q E +IL + S F+V+L + LV M ++ +++ + N
Sbjct: 224 KKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN 283
Query: 176 LVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
+ + + LE LH +I+ D+KP NVLLD D ++SD GL+
Sbjct: 284 PGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 14/147 (9%)
Query: 91 IGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQ--TEREFQNELQILGGLRSPFLVTLL 145
IGKG V L AR G+ +AIK +D L + ++ E++I+ L P +V L
Sbjct: 20 IGKGNFAKVKL--ARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 77
Query: 146 GYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ-RFEIIMDVAKALEFLHFGCDPP 204
L+ EY + + L + G + K ++ +F + A+++ H
Sbjct: 78 EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QIVSAVQYCH---QKR 131
Query: 205 VIHGDIKPSNVLLDSDCRGKVSDFGLS 231
++H D+K N+LLD+D K++DFG S
Sbjct: 132 IVHRDLKAENLLLDADMNIKIADFGFS 158
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 575 GTLCYVAPE-YGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
G+ Y APE + G Y + D++SLGV++ +VSG P
Sbjct: 172 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 211
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFL-GIARDGKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ +G G G V L G A+K LD + ++ + NE +IL +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFL L + + +V EY P + FS + ++S+ RF + E
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 156
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH D +I+ D+KP N+++D KV+DFG ++ +V+G
Sbjct: 157 YLH-SLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK-RVKG 194
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 81
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 141
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ D K+ DFGL+R
Sbjct: 142 YIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLAR 175
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFL-GIARDGKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ +G G G V L G A+K LD + ++ + NE +IL +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFL L + + +V EY P + FS + ++S+ RF + E
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 156
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH D +I+ D+KP N+++D KV+DFG ++ +V+G
Sbjct: 157 YLH-SLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK-RVKG 194
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 16/131 (12%)
Query: 556 DMWSGDLFSRELSSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHV 615
D+ G FS + ++ S+ GT Y++PE K+DI+SLG L+ + +
Sbjct: 179 DLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA------- 231
Query: 616 LASPMKLEKANLISWCRHLAQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTPELR 675
L SP +K NL S C+ + Q L D+ E+ +N+ C+ PE R
Sbjct: 232 LQSPFYGDKMNLYSLCKKIEQCDY------PPLPSDHYSEELRQLVNM---CINPDPEKR 282
Query: 676 PDIGETVRILK 686
PD+ + K
Sbjct: 283 PDVTYVYDVAK 293
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 9/160 (5%)
Query: 80 NATNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSL---QTEREFQNELQILGG 135
N +F IG+G V+ DG +A+K++ F L + + E+ +L
Sbjct: 29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQ 88
Query: 136 LRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEML--FSDGNLVLKWSQRFEIIMDVAKA 193
L P ++ +E N+ +V E L M+ F ++ ++ + + A
Sbjct: 89 LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA 148
Query: 194 LEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
LE +H V+H DIKP+NV + + K+ D GL R
Sbjct: 149 LEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRF 185
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 17/150 (11%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
IG G GTV+ G + + + + Q + F+NE+ +L R ++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEII--MDVAK----ALEFLHFGCDPP 204
I V ++ SL L +++ +FE+I +D+A+ +++LH
Sbjct: 76 PQLAI-VTQWCEGSSLYHHL----HII---ETKFEMIKLIDIARQTAQGMDYLH---AKS 124
Query: 205 VIHGDIKPSNVLLDSDCRGKVSDFGLSRIK 234
+IH D+K +N+ L D K+ DFGL+ +K
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVK 154
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 77/156 (49%), Gaps = 14/156 (8%)
Query: 85 FDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQT--EREFQNELQILGGLRSPFL 141
+ + IG+G G V K+ +AI+++ F QT +R + E++IL R +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLR-EIKILLRFRHENI 87
Query: 142 V----TLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
+ + +E+ K + + + + L ++L + L + + + L+++
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 144
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
H V+H D+KPSN+LL++ C K+ DFGL+R+
Sbjct: 145 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 177
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 14/161 (8%)
Query: 76 KELKNATNDFDEANVIGKGGSGTV-FLGIARDGKLLAIKRLDTFSLQTERE---FQNELQ 131
K+++ DF+ VIG+G G V + + K+ A+K L+ + + E F+ E
Sbjct: 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERD 126
Query: 132 ILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRF---EIIM 188
+L S ++ TL + N LV +Y L +L + + + RF E+++
Sbjct: 127 VLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVI 186
Query: 189 DVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFG 229
+ ++ LH+ +H DIKP N+L+D + +++DFG
Sbjct: 187 AI-DSVHQLHY------VHRDIKPDNILMDMNGHIRLADFG 220
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 79
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLK 139
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ D K+ DFGL+R
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR 173
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 6/159 (3%)
Query: 75 YKELKNATNDFDEANVIGK-GGSGTVFLGIARDGKLLAI-KRLDTFSLQTEREFQNELQI 132
Y+ + N D +IG+ G G V+ ++ +LA K +DT S + ++ E+ I
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDI 60
Query: 133 LGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
L P +V LL N ++ E+ ++ ++ + L SQ +
Sbjct: 61 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTLD 119
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL +LH D +IH D+K N+L D K++DFG+S
Sbjct: 120 ALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS 155
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 75/149 (50%), Gaps = 13/149 (8%)
Query: 91 IGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQTER----EFQNELQILGGLRSPFLVTLL 145
+G+G TV+ G ++ L+A+K + L+ E E+ +L L+ +VTL
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEI---RLEHEEGAPCTAIREVSLLKDLKHANIVTLH 66
Query: 146 GYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPV 205
LV+EY+ +K L++ L GN++ + + + + + L + H V
Sbjct: 67 DIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKL-FLFQLLRGLAYCH---RQKV 121
Query: 206 IHGDIKPSNVLLDSDCRGKVSDFGLSRIK 234
+H D+KP N+L++ K++DFGL+R K
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLARAK 150
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 10/159 (6%)
Query: 83 NDFDEANVIGKGGSGTVFL-GIARDGKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ +G G G V L G A+K LD + ++ + NE +IL +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH 198
PFL L + + +V EY P + L G ++ + + E+LH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYA--AQIVLTFEYLH 159
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
D +I+ D+KP N+++D KV+DFG ++ +V+G
Sbjct: 160 -SLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK-RVKG 194
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 84
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 144
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ D K+ DFGL+R
Sbjct: 145 YIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR 178
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 31/158 (19%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
IG G G V A D L +AIK+L R FQN+ R L+ + +
Sbjct: 32 IGSGAQGIV--CAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVNH 82
Query: 148 CMERNKRILVYEYMPNKSLQE-------MLFSDGNL--VLKWSQRFE----IIMDVAKAL 194
+N L+ + P K+L+E M D NL V++ E ++ + +
Sbjct: 83 ---KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGI 139
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ LH +IH D+KPSN+++ SD K+ DFGL+R
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 9/146 (6%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTE-REFQNELQILGGLRSPFLVTLLG 146
+G G G+V G+ R K +AIK L + + + E E QI+ L +P++V L+G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 147 YCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVI 206
C + +LV E L + L + S E++ V+ +++L + +
Sbjct: 404 VC-QAEALMLVMEMAGGGPLHKFLVGKREEI-PVSNVAELLHQVSMGMKYLE---EKNFV 458
Query: 207 HGDIKPSNVLLDSDCRGKVSDFGLSR 232
H ++ NVLL + K+SDFGLS+
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSK 484
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 28/157 (17%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
+G G G+V + G +A+K+L R FQ+ I+ R+ + LL +
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKL-------SRPFQS---IIHAKRTYRELRLLKHMK 90
Query: 150 ERNKRILVYEYMPNKSLQE---------MLFSDGNLVLKWSQRFE-----IIMDVAKALE 195
N L+ + P +SL+E ++ +D N ++K + + +I + + L+
Sbjct: 91 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 150
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H +IH D+KPSN+ ++ D K+ DFGL+R
Sbjct: 151 YIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR 184
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 31/158 (19%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
IG G G V A D L +AIK+L R FQN+ R L+ + +
Sbjct: 25 IGSGAQGIV--CAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYRELVLMKCVNH 75
Query: 148 CMERNKRILVYEYMPNKSLQE-------MLFSDGNL--VLKWSQRFE----IIMDVAKAL 194
+N L+ + P K+L+E M D NL V++ E ++ + +
Sbjct: 76 ---KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGI 132
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ LH +IH D+KPSN+++ SD K+ DFGL+R
Sbjct: 133 KHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR 167
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 69/149 (46%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G G G V++ +A+K + S+ E F E ++ L+ LV L +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHA-VVT 253
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
+ ++ E+M SL + L SD + + +A+ + F+ IH D+
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDL 310
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+ +N+L+ + K++DFGL+R+ + E+
Sbjct: 311 RAANILVSASLVCKIADFGLARVIEDNEY 339
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 70/170 (41%), Gaps = 23/170 (13%)
Query: 83 NDFDEANVIGKGGSGTVF----LGIARDGKLL--AIKRLDTFSLQTERE-FQNELQILGG 135
N+ +G G G V G+ ++ +L A+K L + + E+E +EL+I+
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 136 L-RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEML------------FSDGNLVLKWSQ 182
L + +V LLG C +++ EY L L F+ N L
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRD 165
Query: 183 RFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
VA+ + FL IH D+ NVLL + K+ DFGL+R
Sbjct: 166 LLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 212
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
Query: 85 FDEANVIGKGGSGTVF-LGIARDGKLLAIKRLDTFSLQTEREFQN---ELQILGGLRSPF 140
F + V+G+GG G VF + GKL A K+L+ L+ + +Q E +IL + S F
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 141 LVTLLGYCME-RNKRILVYEYMPNKSLQEMLFS--DGNLVLKWSQRFEIIMDVAKALEFL 197
+V+L Y E + LV M ++ +++ + N + + + LE L
Sbjct: 247 IVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL 305
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
H +I+ D+KP NVLLD D ++SD GL+
Sbjct: 306 H---QRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 80 NATNDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQ-TEREFQNELQILGGLR 137
++++ F + +G G TV+ G+ + G +A+K + S + T E+ ++ L+
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVA---KAL 194
+V L NK LV+E+M N + M D V + E+ + + L
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDLKKYM---DSRTVGNTPRGLELNLVKYFQWQLL 118
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ L F + ++H D+KP N+L++ + K+ DFGL+R
Sbjct: 119 QGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLAR 156
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 18/180 (10%)
Query: 85 FDEANVIGKGGSGTVFLG-IARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVT 143
+ + VIG G G V+ + G+L+AIK++ LQ + ELQI+ L +V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIVR 77
Query: 144 LLGYCMERNKRI------LVYEYMPNKSLQ-EMLFSDGNLVLKWSQRFEIIMDVAKALEF 196
L + ++ LV +Y+P + +S L + + ++L +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 197 LH-FGCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGEFGMDLFSQDLGKSQEL 254
+H FG + H DIKP N+LLD D K+ DFG ++ V GE + ++ EL
Sbjct: 138 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
Query: 85 FDEANVIGKGGSGTVF-LGIARDGKLLAIKRLDTFSLQTEREFQN---ELQILGGLRSPF 140
F + V+G+GG G VF + GKL A K+L+ L+ + +Q E +IL + S F
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 141 LVTLLGYCME-RNKRILVYEYMPNKSLQEMLFS--DGNLVLKWSQRFEIIMDVAKALEFL 197
+V+L Y E + LV M ++ +++ + N + + + LE L
Sbjct: 247 IVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL 305
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
H +I+ D+KP NVLLD D ++SD GL+
Sbjct: 306 H---QRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 91 IGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQ--TEREFQNELQILGGLRSPFLVTLL 145
IGKG V L AR G+ +A+K +D L + ++ E++I+ L P +V L
Sbjct: 23 IGKGNFAKVKL--ARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 146 GYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ-RFEIIMDVAKALEFLHFGCDPP 204
LV EY + + L + G + K ++ +F + A+++ H
Sbjct: 81 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCH---QKY 134
Query: 205 VIHGDIKPSNVLLDSDCRGKVSDFGLS 231
++H D+K N+LLD D K++DFG S
Sbjct: 135 IVHRDLKAENLLLDGDMNIKIADFGFS 161
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Query: 563 FSRELSSTTSMRGTLC----YVAPE-YGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
FS E + + T C Y APE + G Y + D++SLGV++ +VSG P
Sbjct: 160 FSNEFTVGNKL-DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Query: 85 FDEANVIGKGGSGTVF-LGIARDGKLLAIKRLDTFSLQTEREFQN---ELQILGGLRSPF 140
F + V+G+GG G VF + GKL A K+L+ L+ + +Q E +IL + S F
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 141 LVTLLGYCMERNKRILVYEYMPNKSLQEMLFS--DGNLVLKWSQRFEIIMDVAKALEFLH 198
+V+L + LV M ++ +++ + N + + + LE LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
+I+ D+KP NVLLD D ++SD GL+
Sbjct: 307 ---QRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 16/161 (9%)
Query: 81 ATNDFD-EANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQTEREFQNELQILGGLRS 138
T+D+ V+G G +G V R G+ A+K L S + +E + Q GG
Sbjct: 7 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYD-SPKARQEVDHHWQASGG--- 62
Query: 139 PFLVTLLGYC--MERNKR--ILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKAL 194
P +V +L M KR +++ E M L + G+ + EI+ D+ A+
Sbjct: 63 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 122
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDS---DCRGKVSDFGLSR 232
+FLH + H D+KP N+L S D K++DFG ++
Sbjct: 123 QFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 160
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 69/149 (46%), Gaps = 5/149 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G G G V++ +A+K + S+ E F E ++ L+ LV L +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHA-VVT 80
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
+ ++ E+M SL + L SD + + +A+ + F+ IH D+
Sbjct: 81 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDL 137
Query: 211 KPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+ +N+L+ + K++DFGL+R+ + E+
Sbjct: 138 RAANILVSASLVCKIADFGLARVIEDNEY 166
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 9/153 (5%)
Query: 85 FDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQN---ELQILGGLRSPF 140
F + IG G G V+ R+ +++AIK++ Q+ ++Q+ E++ L LR P
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 141 LVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFG 200
+ G + + LV EY + + L Q EI AL+ L +
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPL-----QEVEIAAVTHGALQGLAYL 131
Query: 201 CDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+IH D+K N+LL K+ DFG + I
Sbjct: 132 HSHNMIHRDVKAGNILLSEPGLVKLGDFGSASI 164
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 72/160 (45%), Gaps = 35/160 (21%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
IG G G V A D L +AIK+L R FQN+ R + L+
Sbjct: 32 IGSGAQGIV--CAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYRE---LVLMKX 79
Query: 148 CMERNKRILVYEYMPNKSLQEMLFSDGNLVLKW-----SQRFEIIMDVAK---------- 192
+N L+ + P K+L+E F D LV++ Q ++ +D +
Sbjct: 80 VNHKNIISLLNVFTPQKTLEE--FQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLC 137
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++ LH +IH D+KPSN+++ SD K+ DFGL+R
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 16/161 (9%)
Query: 81 ATNDFD-EANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQTEREFQNELQILGGLRS 138
T+D+ V+G G +G V R G+ A+K L S + +E + Q GG
Sbjct: 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYD-SPKARQEVDHHWQASGG--- 81
Query: 139 PFLVTLLGYC--MERNKR--ILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKAL 194
P +V +L M KR +++ E M L + G+ + EI+ D+ A+
Sbjct: 82 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 141
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDS---DCRGKVSDFGLSR 232
+FLH + H D+KP N+L S D K++DFG ++
Sbjct: 142 QFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 86/167 (51%), Gaps = 22/167 (13%)
Query: 75 YKELKNATNDFDEANVIGKGGSGTVFLGIAR----DGKLLAIKRL--DTFSLQTEREFQN 128
Y+ + +N F + IG+G +V+L A+ + +A+K L + ++ E Q
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQC 72
Query: 129 ELQILGGLRSPFLVTLLGYCMERNKRILV-YEYMPNKSLQEMLFSDGNLVLKWSQRFEII 187
L + GG + V + YC +N +++ Y+ ++S ++L S L + + E +
Sbjct: 73 -LTVAGGQDN---VMGVKYCFRKNDHVVIAMPYLEHESFLDILNS-----LSFQEVREYM 123
Query: 188 MDVAKALEFLH-FGCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSR 232
+++ KAL+ +H FG ++H D+KPSN L + + + DFGL++
Sbjct: 124 LNLFKALKRIHQFG----IVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 91 IGKGGSGTVFLGIARD---GKLLAIKRLDTFSLQTE--REFQNELQILGGLRSPFLVTLL 145
IGKG V L AR GK +A+K +D L + ++ E++I L P +V L
Sbjct: 22 IGKGNFAKVKL--ARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLF 79
Query: 146 GYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ-RFEIIMDVAKALEFLHFGCDPP 204
LV EY + + L + G K ++ +F I+ A+++ H
Sbjct: 80 EVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVS---AVQYCH---QKF 133
Query: 205 VIHGDIKPSNVLLDSDCRGKVSDFGLS 231
++H D+K N+LLD+D K++DFG S
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFS 160
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 575 GTLCYVAPE-YGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
G Y APE + G Y + D++SLGV++ +VSG P
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 9/153 (5%)
Query: 85 FDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQN---ELQILGGLRSPF 140
F + IG G G V+ R+ +++AIK++ Q+ ++Q+ E++ L LR P
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 141 LVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFG 200
+ G + + LV EY S ++L + K Q EI AL+ L +
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLG-SASDLL----EVHKKPLQEVEIAAVTHGALQGLAYL 170
Query: 201 CDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
+IH D+K N+LL K+ DFG + I
Sbjct: 171 HSHNMIHRDVKAGNILLSEPGLVKLGDFGSASI 203
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 32/174 (18%)
Query: 88 ANVIGKGGSGTVF----LGIARDGKLL--AIKRLDTFSLQTERE-FQNELQILGGLRS-P 139
V+G G G V GI++ G + A+K L + +ERE +EL+++ L S
Sbjct: 50 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHE 109
Query: 140 FLVTLLGYCMERNKRILVYEYMPNKSLQEML------FSDGNLVLKWSQRFE-------- 185
+V LLG C L++EY L L FS+ + + +R E
Sbjct: 110 NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL 169
Query: 186 -------IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
VAK +EFL F +H D+ NVL+ K+ DFGL+R
Sbjct: 170 TFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLAR 220
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 29/157 (18%)
Query: 91 IGKGGSGTVFLGIARDGKL---LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
IG G G V A D L +AIK+L R FQN+ R + L+
Sbjct: 32 IGSGAQGIV--CAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYRE---LVLMKX 79
Query: 148 CMERNKRILVYEYMPNKSLQEMLFSDGNLVLKW-----SQRFEIIMDVAKALEFLH-FGC 201
+N L+ + P K+L+E F D LV++ Q ++ +D + L+ C
Sbjct: 80 VNHKNIISLLNVFTPQKTLEE--FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 137
Query: 202 ------DPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+IH D+KPSN+++ SD K+ DFGL+R
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 76 KELKNATNDFDEANVIGKGG-SGTVFLGIARDGKLLAIKRLDTFSLQTERE---FQNELQ 131
KE++ +DF+ VIG+G S + + + G++ A+K ++ + + E F+ E
Sbjct: 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERD 113
Query: 132 ILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVA 191
+L ++ L + N LV EY L +L G + RF + ++
Sbjct: 114 VLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARF-YLAEIV 172
Query: 192 KALEFLH-FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFG 229
A++ +H G +H DIKP N+LLD +++DFG
Sbjct: 173 MAIDSVHRLG----YVHRDIKPDNILLDRCGHIRLADFG 207
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Query: 77 ELKNATNDFDEANVIGKGGSGTVFLG-IARDGKLLAIKRL--DTFSLQTEREFQN-ELQI 132
++K DF ++GKG G VFL + + AIK L D + + E E ++
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 133 LG-GLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRF--EIIMD 189
L PFL + + V EY+ L + S L + + EII+
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIIL- 129
Query: 190 VAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGE 238
L+FLH +++ D+K N+LLD D K++DFG+ + + G+
Sbjct: 130 ---GLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD 172
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 9/135 (6%)
Query: 107 GKLLAIKRLDT-FSLQTEREFQNELQILGGLRSPFLVTLLGYCMERNKRIL--VYEYMPN 163
G+++A+K L Q ++ E+ IL L ++ G C ++ ++ L V EY+P
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 164 KSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG 223
SL++ L + +Q + + + +LH IH ++ NVLLD+D
Sbjct: 103 GSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLH---SQHYIHRNLAARNVLLDNDRLV 156
Query: 224 KVSDFGLSRIKVEGE 238
K+ DFGL++ EG
Sbjct: 157 KIGDFGLAKAVPEGH 171
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 18/157 (11%)
Query: 91 IGKGGSGTVFLGIAR------DGKLLAIKRLDTFSLQTER-EFQNELQILGGLRSPFLVT 143
+G+G G V+ G+A+ +AIK ++ + ER EF NE ++ +V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFS-----DGNLVL---KWSQRFEIIMDVAKALE 195
LLG + +++ E M L+ L S + N VL S+ ++ ++A +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+L+ +H D+ N ++ D K+ DFG++R
Sbjct: 146 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIARD------GKLLAIKRLDTFSLQTEREFQNELQILGG 135
T+D+ +GKG V + + K++ K+L S + ++ + E +I
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKL---SARDHQKLEREARICRL 86
Query: 136 LRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALE 195
L+ P +V L E LV++ + L E + + ++ + + + LE
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-----EYYSEADASHCIHQILE 141
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRG---KVSDFGLSRIKVEGE 238
++ ++H D+KP N+LL S C+G K++DFGL+ I+V+GE
Sbjct: 142 SVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGE 186
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 18/157 (11%)
Query: 91 IGKGGSGTVFLGIAR------DGKLLAIKRLDTFSLQTER-EFQNELQILGGLRSPFLVT 143
+G+G G V+ G+A+ +AIK ++ + ER EF NE ++ +V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFS-----DGNLVL---KWSQRFEIIMDVAKALE 195
LLG + +++ E M L+ L S + N VL S+ ++ ++A +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+L+ +H D+ N ++ D K+ DFG++R
Sbjct: 153 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARDG--KLLAIKRLDTFSLQTEREFQN---ELQILGGLR 137
DF+ V+GKG G V L R G +L AIK L + + + + E ++L L
Sbjct: 19 TDFNFLMVLGKGSFGKVMLA-DRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLD 77
Query: 138 SPFLVTLLGYCMERNKRI-LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEF 196
P +T L C + R+ V EY+ L + G K Q +++ L F
Sbjct: 78 KPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKF--KEPQAVFYAAEISIGLFF 135
Query: 197 LHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
LH +I+ D+K NV+LDS+ K++DFG+ +
Sbjct: 136 LH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCK 168
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 73 FTYKELKNATNDFDEANVIGKGGSGTVFLGIARD------GKLLAIKRLDTFSLQTER-E 125
F E + A + +G+G G V+ G+A+ +AIK ++ + ER E
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 65
Query: 126 FQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFS-----DGNLVL-- 178
F NE ++ +V LLG + +++ E M L+ L S + N VL
Sbjct: 66 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 125
Query: 179 -KWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
S+ ++ ++A + +L+ +H D+ N ++ D K+ DFG++R
Sbjct: 126 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 177
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 79/159 (49%), Gaps = 23/159 (14%)
Query: 91 IGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTL----- 144
+G GG+G VF + D K +AIK++ Q+ + E++I+ L +V +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 145 ---------LGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALE 195
+G E N +V EYM L +L G L+ + ++ F + + + L+
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVL-EQGPLLEEHARLF--MYQLLRGLK 134
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDS-DCRGKVSDFGLSRI 233
++H V+H D+KP+N+ +++ D K+ DFGL+RI
Sbjct: 135 YIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARI 170
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 66/143 (46%), Gaps = 5/143 (3%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
+G G G V++ +A+K + S+ E F E ++ L+ LV L +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHA-VVT 247
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDI 210
+ ++ E+M SL + L SD + + +A+ + F+ IH D+
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDL 304
Query: 211 KPSNVLLDSDCRGKVSDFGLSRI 233
+ +N+L+ + K++DFGL+R+
Sbjct: 305 RAANILVSASLVCKIADFGLARV 327
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 18/157 (11%)
Query: 91 IGKGGSGTVFLGIARD------GKLLAIKRLDTFSLQTER-EFQNELQILGGLRSPFLVT 143
+G+G G V+ G+A+ +AIK ++ + ER EF NE ++ +V
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFS-----DGNLVL---KWSQRFEIIMDVAKALE 195
LLG + +++ E M L+ L S + N VL S+ ++ ++A +
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+L+ +H D+ N ++ D K+ DFG++R
Sbjct: 138 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 171
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 18/131 (13%)
Query: 115 LDTFSLQTEREFQNELQI--LGGLRSPFLVTLLGYCMERNKRI-----LVYEYMPNKSLQ 167
+ F +Q ++ +QNE ++ L G++ ++ +G +R + L+ + SL
Sbjct: 52 VKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIG-AEKRGTSVDVDLWLITAFHEKGSLS 110
Query: 168 EMLFSDGNLVLKWSQRFEIIMDVAKALEFLHF-------GCDPPVIHGDIKPSNVLLDSD 220
+ L ++ V+ W++ I +A+ L +LH G P + H DIK NVLL ++
Sbjct: 111 DFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNN 167
Query: 221 CRGKVSDFGLS 231
++DFGL+
Sbjct: 168 LTACIADFGLA 178
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 18/157 (11%)
Query: 91 IGKGGSGTVFLGIARD------GKLLAIKRLDTFSLQTER-EFQNELQILGGLRSPFLVT 143
+G+G G V+ G+A+ +AIK ++ + ER EF NE ++ +V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFS-----DGNLVL---KWSQRFEIIMDVAKALE 195
LLG + +++ E M L+ L S + N VL S+ ++ ++A +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+L+ +H D+ N ++ D K+ DFG++R
Sbjct: 147 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 17/147 (11%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
IG G GTV+ G + + + + Q + F+NE+ +L R ++ +GY
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 94
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEII--MDVAK----ALEFLHFGCDPP 204
+ + +V ++ SL L +++ +FE+I +D+A+ +++LH
Sbjct: 95 KPQLAIVTQWCEGSSLYHHL----HII---ETKFEMIKLIDIARQTAQGMDYLHAKS--- 144
Query: 205 VIHGDIKPSNVLLDSDCRGKVSDFGLS 231
+IH D+K +N+ L D K+ DFGL+
Sbjct: 145 IIHRDLKSNNIFLHEDLTVKIGDFGLA 171
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 18/157 (11%)
Query: 91 IGKGGSGTVFLGIARD------GKLLAIKRLDTFSLQTER-EFQNELQILGGLRSPFLVT 143
+G+G G V+ G+A+ +AIK ++ + ER EF NE ++ +V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFS-----DGNLVL---KWSQRFEIIMDVAKALE 195
LLG + +++ E M L+ L S + N VL S+ ++ ++A +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+L+ +H D+ N ++ D K+ DFG++R
Sbjct: 146 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 16/162 (9%)
Query: 83 NDFDEANVIGKGGSGTVFL-GIARDGKLLAIKRLDTFSLQTEREFQ---NELQILGGLRS 138
+ F+ +G G G V L G A+K LD + ++ + NE +IL +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ---RFEIIMDVAKALE 195
PFLV L + + +V EY+ + FS + ++S+ RF + E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFE 155
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEG 237
+LH +I+ D+KP N+L+D +V+DFG ++ +V+G
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKG 193
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 17/147 (11%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
IG G GTV+ G + + + + Q + F+NE+ +L R ++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 74
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEII--MDVAK----ALEFLHFGCDPP 204
+ + +V ++ SL L +++ +FE+I +D+A+ +++LH
Sbjct: 75 KPQLAIVTQWCEGSSLYHHL----HII---ETKFEMIKLIDIARQTAQGMDYLH---AKS 124
Query: 205 VIHGDIKPSNVLLDSDCRGKVSDFGLS 231
+IH D+K +N+ L D K+ DFGL+
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 18/157 (11%)
Query: 91 IGKGGSGTVFLGIARD------GKLLAIKRLDTFSLQTER-EFQNELQILGGLRSPFLVT 143
+G+G G V+ G+A+ +AIK ++ + ER EF NE ++ +V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFS-----DGNLVL---KWSQRFEIIMDVAKALE 195
LLG + +++ E M L+ L S + N VL S+ ++ ++A +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+L+ +H D+ N ++ D K+ DFG++R
Sbjct: 147 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 18/157 (11%)
Query: 91 IGKGGSGTVFLGIARD------GKLLAIKRLDTFSLQTER-EFQNELQILGGLRSPFLVT 143
+G+G G V+ G+A+ +AIK ++ + ER EF NE ++ +V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFS-----DGNLVL---KWSQRFEIIMDVAKALE 195
LLG + +++ E M L+ L S + N VL S+ ++ ++A +
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+L+ +H D+ N ++ D K+ DFG++R
Sbjct: 140 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 173
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 9/135 (6%)
Query: 107 GKLLAIKRLDT-FSLQTEREFQNELQILGGLRSPFLVTLLGYCMERNKRIL--VYEYMPN 163
G+++A+K L Q ++ E+ IL L ++ G C ++ ++ L V EY+P
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 164 KSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG 223
SL++ L + +Q + + + +LH IH ++ NVLLD+D
Sbjct: 103 GSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLH---AQHYIHRNLAARNVLLDNDRLV 156
Query: 224 KVSDFGLSRIKVEGE 238
K+ DFGL++ EG
Sbjct: 157 KIGDFGLAKAVPEGH 171
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 74/150 (49%), Gaps = 14/150 (9%)
Query: 91 IGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQT--EREFQNELQILGGLRSPFLV----T 143
IG+G G V K+ +AIK++ F QT +R + E++IL R ++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLAFRHENIIGINDI 91
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
+ +E+ K + + + + L ++L + L + + + L+++H
Sbjct: 92 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYIHSAN-- 146
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
V+H D+KPSN+LL++ K+ DFGL+R+
Sbjct: 147 -VLHRDLKPSNLLLNTTSDLKICDFGLARV 175
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 17/147 (11%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCME 150
IG G GTV+ G + + + + Q + F+NE+ +L R ++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 102
Query: 151 RNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEII--MDVAK----ALEFLHFGCDPP 204
+ + +V ++ SL L +++ +FE+I +D+A+ +++LH
Sbjct: 103 KPQLAIVTQWCEGSSLYHHL----HII---ETKFEMIKLIDIARQTAQGMDYLHAKS--- 152
Query: 205 VIHGDIKPSNVLLDSDCRGKVSDFGLS 231
+IH D+K +N+ L D K+ DFGL+
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 9/135 (6%)
Query: 107 GKLLAIKRLDTFSLQTERE-FQNELQILGGLRSPFLVTLLGYCMERNKRIL--VYEYMPN 163
G+++A+K L + R ++ E+ IL L ++ G C + L V EY+P
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPL 119
Query: 164 KSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG 223
SL++ L + +Q + + + +LH IH D+ NVLLD+D
Sbjct: 120 GSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLV 173
Query: 224 KVSDFGLSRIKVEGE 238
K+ DFGL++ EG
Sbjct: 174 KIGDFGLAKAVPEGH 188
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 74/167 (44%), Gaps = 18/167 (10%)
Query: 88 ANVIGKGGSGTVFLGIAR--DGKLLAIK----RLDTFSLQTEREFQNELQILGGLRSPFL 141
++G+G G+V G + DG L + +LD S + EF +E + P +
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98
Query: 142 VTLLGYCMERN-----KRILVYEYMPNKSLQEMLF----SDGNLVLKWSQRFEIIMDVAK 192
+ LLG C+E + K +++ +M L L G + + ++D+A
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIAL 158
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+E+L + +H D+ N +L D V+DFGLS+ G++
Sbjct: 159 GMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDY 202
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 12/160 (7%)
Query: 76 KELKNATNDFDEANVIGKGGSGTV-FLGIARDGKLLAIKRLDTFSLQTERE---FQNELQ 131
KE++ DF+ VIG+G G V + + ++ A+K L+ + + E F+ E
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 126
Query: 132 ILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEI--IMD 189
+L ++ L + N LV +Y L +L + + + RF I ++
Sbjct: 127 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVL 186
Query: 190 VAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFG 229
++ LH+ +H DIKP NVLLD + +++DFG
Sbjct: 187 AIDSIHQLHY------VHRDIKPDNVLLDVNGHIRLADFG 220
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 18/157 (11%)
Query: 91 IGKGGSGTVFLGIARD------GKLLAIKRLDTFSLQTER-EFQNELQILGGLRSPFLVT 143
+G+G G V+ G+A+ +AIK ++ + ER EF NE ++ +V
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFS-----DGNLVL---KWSQRFEIIMDVAKALE 195
LLG + +++ E M L+ L S + N VL S+ ++ ++A +
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+L+ +H D+ N ++ D K+ DFG++R
Sbjct: 175 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 208
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 73/150 (48%), Gaps = 7/150 (4%)
Query: 85 FDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVT 143
+D +G G G V + + G++ K ++T + +NE+ I+ L P L+
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLIN 112
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
L ++ + +L+ E++ L + + ++ K S+ E+I + +A E L +
Sbjct: 113 LHDAFEDKYEMVLILEFLSGGELFDRIAAED---YKMSEA-EVINYMRQACEGLKHMHEH 168
Query: 204 PVIHGDIKPSNVLLDSDCRG--KVSDFGLS 231
++H DIKP N++ ++ K+ DFGL+
Sbjct: 169 SIVHLDIKPENIMCETKKASSVKIIDFGLA 198
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 12/160 (7%)
Query: 76 KELKNATNDFDEANVIGKGGSGTV-FLGIARDGKLLAIKRLDTFSLQTERE---FQNELQ 131
KE++ DF+ VIG+G G V + + ++ A+K L+ + + E F+ E
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 142
Query: 132 ILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEI--IMD 189
+L ++ L + N LV +Y L +L + + + RF I ++
Sbjct: 143 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVL 202
Query: 190 VAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFG 229
++ LH+ +H DIKP NVLLD + +++DFG
Sbjct: 203 AIDSIHQLHY------VHRDIKPDNVLLDVNGHIRLADFG 236
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 10/152 (6%)
Query: 85 FDEANVIGKGGSGTVFLGIARDG-KLLAIKR--LDTFSLQTEREFQNELQILGGLRSPFL 141
+++ IG+G GTVF R+ +++A+KR LD E+ +L L+ +
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 142 VTLLGYCMERNKRILVYEYMPNKSLQEMLFS-DGNLVLKWSQRFEIIMDVAKALEFLHFG 200
V L K LV+E+ ++ L++ S +G+L + + F + + K L F H
Sbjct: 64 VRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSF--LFQLLKGLGFCH-- 118
Query: 201 CDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
V+H D+KP N+L++ + K++DFGL+R
Sbjct: 119 -SRNVLHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 69/161 (42%), Gaps = 16/161 (9%)
Query: 91 IGKGGSGTVF-LGIARDGKLLAIK--RLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
+G+G G V + + G A+K RL+ F + EL GL SP +V L G
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-------ELMACAGLTSPRIVPLYGA 134
Query: 148 CMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIH 207
E + E + SL +++ G L + + + LE+LH ++H
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLVKEQG--CLPEDRALYYLGQALEGLEYLH---SRRILH 189
Query: 208 GDIKPSNVLLDSD-CRGKVSDFGLSRIKVEGEFGMDLFSQD 247
GD+K NVLL SD + DFG + G DL + D
Sbjct: 190 GDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGD 230
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 91 IGKGGSGTVFLGIAR------DGKLLAIKRLDTFSLQTER-EFQNELQILGGLRSPFLVT 143
+G+G G V+ G+A+ +AIK ++ + ER EF NE ++ +V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFS-----DGNLVL---KWSQRFEIIMDVAKALE 195
LLG + +++ E M L+ L S N VL S+ ++ ++A +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
+L+ +H D+ N ++ D K+ DFG++R E ++
Sbjct: 153 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 193
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 73/150 (48%), Gaps = 14/150 (9%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDT--FSLQTEREFQNELQILGGLRSPFLVTLLGY 147
+G G G+V AR + +A+K+L SL R EL++L L+ ++ LL
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 148 CMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFE-----IIMDVAKALEFLHFGCD 202
+ ++ + ++ +D N ++K + ++ + + L+++H
Sbjct: 88 FTPATS---IEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG- 143
Query: 203 PPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+IH D+KPSNV ++ DC ++ DFGL+R
Sbjct: 144 --IIHRDLKPSNVAVNEDCELRILDFGLAR 171
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 18/157 (11%)
Query: 91 IGKGGSGTVFLGIARD------GKLLAIKRLDTFSLQTER-EFQNELQILGGLRSPFLVT 143
+G+G G V+ G+A+ +AIK ++ + ER EF NE ++ +V
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFS-----DGNLVL---KWSQRFEIIMDVAKALE 195
LLG + +++ E M L+ L S N VL S+ ++ ++A +
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+L+ +H D+ N ++ D K+ DFG++R
Sbjct: 143 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 176
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 9/147 (6%)
Query: 89 NVIGKGGSGTVFLGIARDGKLL-AIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
N IG+G G V + + + ++ A K++ + ++ F+ E++I+ L P ++ L
Sbjct: 15 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYET 74
Query: 148 CMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIH 207
+ LV E L E + V + S I+ DV A+ + H V H
Sbjct: 75 FEDNTDIYLVMELCTGGELFERVVH--KRVFRESDAARIMKDVLSAVAYCH---KLNVAH 129
Query: 208 GDIKPSNVLLDSDCRG---KVSDFGLS 231
D+KP N L +D K+ DFGL+
Sbjct: 130 RDLKPENFLFLTDSPDSPLKLIDFGLA 156
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 91 IGKGGSGTVF-LGIARDGKLLAIK--RLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
+G+G G V + + G A+K RL+ F ++ EL GL SP +V L G
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-------ELVACAGLSSPRIVPLYGA 118
Query: 148 CMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIH 207
E + E + SL +++ G L + + + LE+LH ++H
Sbjct: 119 VREGPWVNIFMELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLH---TRRILH 173
Query: 208 GDIKPSNVLLDSD-CRGKVSDFGLSRIKVEGEFGMDLFSQD 247
GD+K NVLL SD R + DFG + G L + D
Sbjct: 174 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 214
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 9/147 (6%)
Query: 89 NVIGKGGSGTVFLGIARDGKLL-AIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
N IG+G G V + + + ++ A K++ + ++ F+ E++I+ L P ++ L
Sbjct: 32 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYET 91
Query: 148 CMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIH 207
+ LV E L E + V + S I+ DV A+ + H V H
Sbjct: 92 FEDNTDIYLVMELCTGGELFERVVH--KRVFRESDAARIMKDVLSAVAYCH---KLNVAH 146
Query: 208 GDIKPSNVLLDSDCRG---KVSDFGLS 231
D+KP N L +D K+ DFGL+
Sbjct: 147 RDLKPENFLFLTDSPDSPLKLIDFGLA 173
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 91 IGKGGSGTVF-LGIARDGKLLAIK--RLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
+G+G G V + + G A+K RL+ F ++ EL GL SP +V L G
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-------ELVACAGLSSPRIVPLYGA 134
Query: 148 CMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIH 207
E + E + SL +++ G L + + + LE+LH ++H
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLH---TRRILH 189
Query: 208 GDIKPSNVLLDSD-CRGKVSDFGLSRIKVEGEFGMDLFSQD 247
GD+K NVLL SD R + DFG + G L + D
Sbjct: 190 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 230
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 74/150 (49%), Gaps = 14/150 (9%)
Query: 91 IGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQT--EREFQNELQILGGLRSPFLV----T 143
IG+G G V K+ +AIK++ F QT +R + E++IL R ++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 89
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
+ +E+ K + + + + L ++L + L + + + L+++H
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYIHSAN-- 144
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
V+H D+KPSN+LL++ K+ DFGL+R+
Sbjct: 145 -VLHRDLKPSNLLLNTTXDLKIXDFGLARV 173
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 18/157 (11%)
Query: 91 IGKGGSGTVFLGIARD------GKLLAIKRLDTFSLQTER-EFQNELQILGGLRSPFLVT 143
+G+G G V+ G+A+ +AIK ++ + ER EF NE ++ +V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFS-----DGNLVL---KWSQRFEIIMDVAKALE 195
LLG + +++ E M L+ L S + N VL S+ ++ ++A +
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+L+ +H D+ N + D K+ DFG++R
Sbjct: 140 YLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR 173
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 74/150 (49%), Gaps = 14/150 (9%)
Query: 91 IGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQT--EREFQNELQILGGLRSPFLV----T 143
IG+G G V K+ +AIK++ F QT +R + E++IL R ++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 89
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
+ +E+ K + + + + L ++L + L + + + L+++H
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYIHSAN-- 144
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
V+H D+KPSN+LL++ K+ DFGL+R+
Sbjct: 145 -VLHRDLKPSNLLLNTTXDLKICDFGLARV 173
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 74/150 (49%), Gaps = 14/150 (9%)
Query: 91 IGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQT--EREFQNELQILGGLRSPFLV----T 143
IG+G G V K+ +AIK++ F QT +R + E++IL R ++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 89
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
+ +E+ K + + + + L ++L + L + + + L+++H
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYIHSAN-- 144
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
V+H D+KPSN+LL++ K+ DFGL+R+
Sbjct: 145 -VLHRDLKPSNLLLNTTXDLKICDFGLARV 173
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 14/174 (8%)
Query: 66 APLKLQRFTYKELKNATNDF---DEANVIGKGGSGTVF-LGIARDGKLLAIKRLDTFSLQ 121
AP + T K+ A N F + ++G G G V G LA K + T ++
Sbjct: 71 APFDHRIVTAKQ--GAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMK 128
Query: 122 TEREFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDG-NLVLKW 180
+ E +NE+ ++ L L+ L +N +LV EY+ L + + + NL
Sbjct: 129 DKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLT--- 185
Query: 181 SQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVL-LDSDCRG-KVSDFGLSR 232
+ I+ + + E + ++H D+KP N+L ++ D + K+ DFGL+R
Sbjct: 186 --ELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLAR 237
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 14/156 (8%)
Query: 85 FDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQT--EREFQNELQILGGLRSPFL 141
+ + IG+G G V K+ +AIK++ F QT +R + E++IL R +
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 103
Query: 142 V----TLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
+ + +E+ K + + ++ L ++L + L + + + L+++
Sbjct: 104 IGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH---LSNDHICYFLYQILRGLKYI 160
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
H V+H D+KPSN+LL++ K+ DFGL+R+
Sbjct: 161 HSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARV 193
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 16/185 (8%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGK----LLAIKRLDT-FSLQTEREFQNELQILGG 135
A D ++G+G G V+ G+ + K +A+K +L + +F +E I+
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 136 LRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALE 195
L P +V L+G +E ++ E P L L + N LK + + KA+
Sbjct: 66 LDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKN-SLKVLTLVLYSLQICKAMA 123
Query: 196 FLH-FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEFGMDLFSQDLGKSQEL 254
+L C +H DI N+L+ S K+ DFGLSR +E E D + + +
Sbjct: 124 YLESINC----VHRDIAVRNILVASPECVKLGDFGLSRY-IEDE---DYYKASVTRLPIK 175
Query: 255 WKSQE 259
W S E
Sbjct: 176 WMSPE 180
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 91 IGKGGSGTVF-LGIARDGKLLAIK--RLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
+G+G G V + + G A+K RL+ F ++ EL GL SP +V L G
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-------ELVACAGLSSPRIVPLYGA 132
Query: 148 CMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIH 207
E + E + SL +++ G L + + + LE+LH ++H
Sbjct: 133 VREGPWVNIFMELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLH---TRRILH 187
Query: 208 GDIKPSNVLLDSD-CRGKVSDFGLSRIKVEGEFGMDLFSQD 247
GD+K NVLL SD R + DFG + G L + D
Sbjct: 188 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 228
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 16/185 (8%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGKL----LAIKRLDT-FSLQTEREFQNELQILGG 135
A D ++G+G G V+ G+ + K +A+K +L + +F +E I+
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 136 LRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALE 195
L P +V L+G +E ++ E P L L + N LK + + KA+
Sbjct: 82 LDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKN-SLKVLTLVLYSLQICKAMA 139
Query: 196 FLH-FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEFGMDLFSQDLGKSQEL 254
+L C +H DI N+L+ S K+ DFGLSR +E E D + + +
Sbjct: 140 YLESINC----VHRDIAVRNILVASPECVKLGDFGLSRY-IEDE---DYYKASVTRLPIK 191
Query: 255 WKSQE 259
W S E
Sbjct: 192 WMSPE 196
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 74/150 (49%), Gaps = 14/150 (9%)
Query: 91 IGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQT--EREFQNELQILGGLRSPFLV----T 143
IG+G G V K+ +AIK++ F QT +R + E++IL R ++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLR-EIKILLRFRHENIIGINDI 93
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
+ +E+ K + + + + L ++L + L + + + L+++H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
V+H D+KPSN+LL++ K+ DFGL+R+
Sbjct: 149 -VLHRDLKPSNLLLNTTXDLKICDFGLARV 177
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 74/150 (49%), Gaps = 14/150 (9%)
Query: 91 IGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQT--EREFQNELQILGGLRSPFLV----T 143
IG+G G V K+ +AIK++ F QT +R + E++IL R ++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDI 93
Query: 144 LLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDP 203
+ +E+ K + + + + L ++L + L + + + L+++H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 204 PVIHGDIKPSNVLLDSDCRGKVSDFGLSRI 233
V+H D+KPSN+LL++ K+ DFGL+R+
Sbjct: 149 -VLHRDLKPSNLLLNTTXDLKICDFGLARV 177
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 7/141 (4%)
Query: 91 IGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM 149
IG+G +G V L + G+ +A+K +D Q NE+ I+ + +V + +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 150 ERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGD 209
+ ++ E++ +L +++ + L Q + V +AL +LH VIH D
Sbjct: 113 VGEELWVLMEFLQGGALTDIV---SQVRLNEEQIATVCEAVLQALAYLHAQG---VIHRD 166
Query: 210 IKPSNVLLDSDCRGKVSDFGL 230
IK ++LL D R K+SDFG
Sbjct: 167 IKSDSILLTLDGRVKLSDFGF 187
Score = 30.0 bits (66), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 563 FSRELSSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRP 612
S+++ + GT ++APE + DI+SLG++++ +V G P
Sbjct: 191 ISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 16/185 (8%)
Query: 81 ATNDFDEANVIGKGGSGTVFLGIARDGKL----LAIKRLDT-FSLQTEREFQNELQILGG 135
A D ++G+G G V+ G+ + K +A+K +L + +F +E I+
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 136 LRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALE 195
L P +V L+G +E ++ E P L L + N LK + + KA+
Sbjct: 70 LDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKN-SLKVLTLVLYSLQICKAMA 127
Query: 196 FLH-FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEFGMDLFSQDLGKSQEL 254
+L C +H DI N+L+ S K+ DFGLSR +E E D + + +
Sbjct: 128 YLESINC----VHRDIAVRNILVASPECVKLGDFGLSRY-IEDE---DYYKASVTRLPIK 179
Query: 255 WKSQE 259
W S E
Sbjct: 180 WMSPE 184
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 21/167 (12%)
Query: 83 NDFDEANVIGKGGSGTVF----LGIARDGKLL--AIKRLDTFSLQTERE-FQNELQILGG 135
N+ +G G G V G+ ++ +L A+K L + + E+E +EL+I+
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 136 L-RSPFLVTLLGYCMERNKRILVYEY---------MPNKSLQEMLFSDGNLVLKWSQRFE 185
L + +V LLG C +++ EY + K+ ++ DG L+
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR-PLELRDLLH 156
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
VA+ + FL IH D+ NVLL + K+ DFGL+R
Sbjct: 157 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 200
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 21/167 (12%)
Query: 83 NDFDEANVIGKGGSGTVF----LGIARDGKLL--AIKRLDTFSLQTERE-FQNELQILGG 135
N+ +G G G V G+ ++ +L A+K L + + E+E +EL+I+
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 136 L-RSPFLVTLLGYCMERNKRILVYEY---------MPNKSLQEMLFSDGNLVLKWSQRFE 185
L + +V LLG C +++ EY + K+ ++ DG L+
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR-PLELRDLLH 164
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
VA+ + FL IH D+ NVLL + K+ DFGL+R
Sbjct: 165 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 208
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Query: 189 DVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
D+ K +E+LH+ +IH DIKPSN+L+ D K++DFG+S
Sbjct: 145 DLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVS 184
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 10/152 (6%)
Query: 85 FDEANVIGKGGSGTVFLGIARDG-KLLAIKR--LDTFSLQTEREFQNELQILGGLRSPFL 141
+++ IG+G GTVF R+ +++A+KR LD E+ +L L+ +
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 142 VTLLGYCMERNKRILVYEYMPNKSLQEMLFS-DGNLVLKWSQRFEIIMDVAKALEFLHFG 200
V L K LV+E+ ++ L++ S +G+L + + F + + K L F H
Sbjct: 64 VRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSF--LFQLLKGLGFCH-- 118
Query: 201 CDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
V+H D+KP N+L++ + K+++FGL+R
Sbjct: 119 -SRNVLHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 125 EFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKW 180
E E ++ L +P++V ++G C E +LV E NK LQ+ N +K
Sbjct: 52 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ------NRHVKD 104
Query: 181 SQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
E++ V+ +++L + +H D+ NVLL + K+SDFGLS+
Sbjct: 105 KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK 153
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 125 EFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKW 180
E E ++ L +P++V ++G C E +LV E NK LQ+ N +K
Sbjct: 54 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ------NRHVKD 106
Query: 181 SQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
E++ V+ +++L + +H D+ NVLL + K+SDFGLS+
Sbjct: 107 KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK 155
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 125 EFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKW 180
E E ++ L +P++V ++G C E +LV E NK LQ+ N +K
Sbjct: 64 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ------NRHVKD 116
Query: 181 SQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
E++ V+ +++L + +H D+ NVLL + K+SDFGLS+
Sbjct: 117 KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK 165
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 125 EFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKW 180
E E ++ L +P++V ++G C E +LV E NK LQ+ N +K
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ------NRHVKD 126
Query: 181 SQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
E++ V+ +++L + +H D+ NVLL + K+SDFGLS+
Sbjct: 127 KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK 175
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 125 EFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKW 180
E E ++ L +P++V ++G C E +LV E NK LQ+ N +K
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ------NRHVKD 126
Query: 181 SQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
E++ V+ +++L + +H D+ NVLL + K+SDFGLS+
Sbjct: 127 KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK 175
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 125 EFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKW 180
E E ++ L +P++V ++G C E +LV E NK LQ+ N +K
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ------NRHVKD 110
Query: 181 SQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
E++ V+ +++L + +H D+ NVLL + K+SDFGLS+
Sbjct: 111 KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK 159
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 125 EFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKW 180
E E ++ L +P++V ++G C E +LV E NK LQ+ N +K
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ------NRHVKD 110
Query: 181 SQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
E++ V+ +++L + +H D+ NVLL + K+SDFGLS+
Sbjct: 111 KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK 159
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 79/161 (49%), Gaps = 16/161 (9%)
Query: 83 NDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRS-PF 140
+D+ +G+G VF I + + + +K L + + + E++IL LR P
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KNKIKREIKILENLRGGPN 93
Query: 141 LVTLLGYCMERNKRI--LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH 198
++TL + R LV+E++ N +++ + + RF + ++ KAL++ H
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRF-YMYEILKALDYCH 148
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGE 238
++H D+KP NV++D + R ++ D+GL+ G+
Sbjct: 149 ---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 186
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 16/153 (10%)
Query: 74 TYKELKNATNDFDEANVIGKGGSGTVFLGIARD----GKL----LAIKRLDTFSLQTERE 125
+ +++N F+E+ +G+G +F G+ R+ G+L + +K LD
Sbjct: 1 VFHKIRNEDLIFNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSES 58
Query: 126 FQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLV-LKWSQRF 184
F ++ L LV G C+ ++ ILV E++ SL L + N + + W +
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KL 116
Query: 185 EIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLL 217
E+ +A A+ FL + +IHG++ N+LL
Sbjct: 117 EVAKQLAAAMHFLE---ENTLIHGNVCAKNILL 146
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 125 EFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKW 180
E E ++ L +P++V ++G C E +LV E NK LQ+ N +K
Sbjct: 72 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ------NRHVKD 124
Query: 181 SQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
E++ V+ +++L + +H D+ NVLL + K+SDFGLS+
Sbjct: 125 KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK 173
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 125 EFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKW 180
E E ++ L +P++V ++G C E +LV E NK LQ+ N +K
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ------NRHVKD 469
Query: 181 SQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
E++ V+ +++L + +H D+ NVLL + K+SDFGLS+
Sbjct: 470 KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK 518
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 15/145 (10%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQTEREFQNELQ------ILG 134
T +F E IG G G+VF + R DG + AIKR L + QN L+ +LG
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLG 66
Query: 135 GLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLV--LKWSQRFEIIMDVAK 192
+ +V E + ++ EY SL + + + ++ K ++ ++++ V +
Sbjct: 67 --QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 124
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLL 217
L ++H ++H DIKPSN+ +
Sbjct: 125 GLRYIH---SMSLVHMDIKPSNIFI 146
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 125 EFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKW 180
E E ++ L +P++V ++G C E +LV E NK LQ+ N +K
Sbjct: 416 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ------NRHVKD 468
Query: 181 SQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
E++ V+ +++L + +H D+ NVLL + K+SDFGLS+
Sbjct: 469 KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK 517
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 15/145 (10%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQTEREFQNELQ------ILG 134
T +F E IG G G+VF + R DG + AIKR L + QN L+ +LG
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKK-PLAGSVDEQNALREVYAHAVLG 66
Query: 135 GLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLV--LKWSQRFEIIMDVAK 192
+ +V E + ++ EY SL + + + ++ K ++ ++++ V +
Sbjct: 67 --QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 124
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLL 217
L ++H ++H DIKPSN+ +
Sbjct: 125 GLRYIH---SMSLVHMDIKPSNIFI 146
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 68/161 (42%), Gaps = 16/161 (9%)
Query: 91 IGKGGSGTVF-LGIARDGKLLAIK--RLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
+G+G G V + + G A+K RL+ F + EL GL SP +V L G
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-------ELMACAGLTSPRIVPLYGA 153
Query: 148 CMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIH 207
E + E + SL +++ G L + + + LE+LH ++H
Sbjct: 154 VREGPWVNIFMELLEGGSLGQLVKEQG--CLPEDRALYYLGQALEGLEYLH---SRRILH 208
Query: 208 GDIKPSNVLLDSD-CRGKVSDFGLSRIKVEGEFGMDLFSQD 247
GD+K NVLL SD + DFG + G L + D
Sbjct: 209 GDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGD 249
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 15/145 (10%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQTEREFQNELQ------ILG 134
T +F E IG G G+VF + R DG + AIKR L + QN L+ +LG
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLG 68
Query: 135 GLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLV--LKWSQRFEIIMDVAK 192
+ +V E + ++ EY SL + + + ++ K ++ ++++ V +
Sbjct: 69 --QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 126
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLL 217
L ++H ++H DIKPSN+ +
Sbjct: 127 GLRYIH---SMSLVHMDIKPSNIFI 148
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Query: 90 VIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYC 148
V+GKG G V+ G ++ +AIK + + + E+ + L+ +V LG
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 149 MERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM-DVAKALEFLHFGCDPPVIH 207
E + E +P SL +L S + Q + + L++LH D ++H
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVH 145
Query: 208 GDIKPSNVLLDS-DCRGKVSDFGLSR 232
DIK NVL+++ K+SDFG S+
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSK 171
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 570 TTSMRGTLCYVAPEY---GGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASP 619
T + GTL Y+APE G GY + ADI+SLG I+ + +G+ P + L P
Sbjct: 180 TETFTGTLQYMAPEIIDKGPRGY-GKAADIWSLGCTIIEMATGKPPFYELGEP 231
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 15/145 (10%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQTEREFQNELQ------ILG 134
T +F E IG G G+VF + R DG + AIKR L + QN L+ +LG
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKK-PLAGSVDEQNALREVYAHAVLG 64
Query: 135 GLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLV--LKWSQRFEIIMDVAK 192
+ +V E + ++ EY SL + + + ++ K ++ ++++ V +
Sbjct: 65 --QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 122
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLL 217
L ++H ++H DIKPSN+ +
Sbjct: 123 GLRYIH---SMSLVHMDIKPSNIFI 144
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 80/201 (39%), Gaps = 37/201 (18%)
Query: 66 APLKLQRFTYKELKNATNDFDEANVI----------GKGGSGTVFLGIARDG-KLLAIKR 114
PL L +K L++ +F N++ GK T F R G +A+K
Sbjct: 1 GPLSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKM 60
Query: 115 LDTFSLQTE-REFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEML--- 170
L + +E R+ +E +L + P ++ L G C + +L+ EY SL+ L
Sbjct: 61 LKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRES 120
Query: 171 --FSDGNL-----------------VLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIK 211
G L L +++ +++L + ++H D+
Sbjct: 121 RKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLA 177
Query: 212 PSNVLLDSDCRGKVSDFGLSR 232
N+L+ + K+SDFGLSR
Sbjct: 178 ARNILVAEGRKMKISDFGLSR 198
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 80/201 (39%), Gaps = 37/201 (18%)
Query: 66 APLKLQRFTYKELKNATNDFDEANVI----------GKGGSGTVFLGIARDG-KLLAIKR 114
PL L +K L++ +F N++ GK T F R G +A+K
Sbjct: 1 GPLSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKM 60
Query: 115 LDTFSLQTE-REFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEML--- 170
L + +E R+ +E +L + P ++ L G C + +L+ EY SL+ L
Sbjct: 61 LKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRES 120
Query: 171 --FSDGNL-----------------VLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIK 211
G L L +++ +++L + ++H D+
Sbjct: 121 RKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLA 177
Query: 212 PSNVLLDSDCRGKVSDFGLSR 232
N+L+ + K+SDFGLSR
Sbjct: 178 ARNILVAEGRKMKISDFGLSR 198
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 69/168 (41%), Gaps = 32/168 (19%)
Query: 91 IGKGGSGTVF----LGIARDG--KLLAIKRLDTFSLQTE-REFQNELQILGGLRSPF-LV 142
+G+G G V GI + + +A+K L + +E R +EL+IL + +V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 143 TLLGYCMERNKRILVY------------------EYMPNKSLQEMLFSDGNLVLKWSQRF 184
LLG C + ++V E++P K E L+ D L
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKD---FLTLEHLI 153
Query: 185 EIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
VAK +EFL IH D+ N+LL K+ DFGL+R
Sbjct: 154 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 198
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 80/201 (39%), Gaps = 37/201 (18%)
Query: 66 APLKLQRFTYKELKNATNDFDEANVI----------GKGGSGTVFLGIARDG-KLLAIKR 114
PL L +K L++ +F N++ GK T F R G +A+K
Sbjct: 1 GPLSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKM 60
Query: 115 LDTFSLQTE-REFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEML--- 170
L + +E R+ +E +L + P ++ L G C + +L+ EY SL+ L
Sbjct: 61 LKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRES 120
Query: 171 --FSDGNL-----------------VLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIK 211
G L L +++ +++L + ++H D+
Sbjct: 121 RKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLA 177
Query: 212 PSNVLLDSDCRGKVSDFGLSR 232
N+L+ + K+SDFGLSR
Sbjct: 178 ARNILVAEGRKMKISDFGLSR 198
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 41/180 (22%)
Query: 83 NDFDEANVIGKGGSGTVF----LGIARDGKLL--AIKRLDTFSLQTERE-FQNELQILGG 135
N+ +G G G V G+ ++ +L A+K L + + E+E +EL+I+
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 136 L-RSPFLVTLLGYCME--------------------RNKRI--LVYEYMPNKSLQEMLFS 172
L + +V LLG C R KR L Y Y P+ + +E L S
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 173 DGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+L +S + VA+ + FL IH D+ NVLL + K+ DFGL+R
Sbjct: 166 RD--LLHFSSQ------VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 214
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 69/168 (41%), Gaps = 32/168 (19%)
Query: 91 IGKGGSGTVF----LGIARDG--KLLAIKRLDTFSLQTE-REFQNELQILGGLRSPF-LV 142
+G+G G V GI + + +A+K L + +E R +EL+IL + +V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 143 TLLGYCMERNKRILVY------------------EYMPNKSLQEMLFSDGNLVLKWSQRF 184
LLG C + ++V E++P K E L+ D L
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD---FLTLEHLI 142
Query: 185 EIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
VAK +EFL IH D+ N+LL K+ DFGL+R
Sbjct: 143 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Query: 90 VIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYC 148
V+GKG G V+ G ++ +AIK + + + E+ + L+ +V LG
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 149 MERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM-DVAKALEFLHFGCDPPVIH 207
E + E +P SL +L S + Q + + L++LH D ++H
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVH 131
Query: 208 GDIKPSNVLLDS-DCRGKVSDFGLSR 232
DIK NVL+++ K+SDFG S+
Sbjct: 132 RDIKGDNVLINTYSGVLKISDFGTSK 157
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 570 TTSMRGTLCYVAPEY---GGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASP 619
T + GTL Y+APE G GY + ADI+SLG I+ + +G+ P + L P
Sbjct: 166 TETFTGTLQYMAPEIIDKGPRGY-GKAADIWSLGCTIIEMATGKPPFYELGEP 217
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Query: 123 EREFQNELQILGGLRSPFLVTLLG--YCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKW 180
E + E+Q+L LR ++ L+ Y E+ K +V EY +QEML S
Sbjct: 50 EANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYC-VCGMQEMLDSVPEKRFPV 108
Query: 181 SQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
Q + LE+LH ++H DIKP N+LL + K+S G++
Sbjct: 109 CQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVA 156
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 69/168 (41%), Gaps = 32/168 (19%)
Query: 91 IGKGGSGTVF----LGIARDG--KLLAIKRLDTFSLQTE-REFQNELQILGGLRSPF-LV 142
+G+G G V GI + + +A+K L + +E R +EL+IL + +V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 143 TLLGYCMERNKRILVY------------------EYMPNKSLQEMLFSDGNLVLKWSQRF 184
LLG C + ++V E++P K E L+ D L
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD---FLTLEHLI 142
Query: 185 EIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
VAK +EFL IH D+ N+LL K+ DFGL+R
Sbjct: 143 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 69/168 (41%), Gaps = 32/168 (19%)
Query: 91 IGKGGSGTVF----LGIARDG--KLLAIKRLDTFSLQTE-REFQNELQILGGLRSPF-LV 142
+G+G G V GI + + +A+K L + +E R +EL+IL + +V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 143 TLLGYCMERNKRILVY------------------EYMPNKSLQEMLFSDGNLVLKWSQRF 184
LLG C + ++V E++P K E L+ D L
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD---FLTLEHLI 142
Query: 185 EIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
VAK +EFL IH D+ N+LL K+ DFGL+R
Sbjct: 143 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 69/168 (41%), Gaps = 32/168 (19%)
Query: 91 IGKGGSGTVF----LGIARDG--KLLAIKRLDTFSLQTE-REFQNELQILGGLRSPF-LV 142
+G+G G V GI + + +A+K L + +E R +EL+IL + +V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 143 TLLGYCMERNKRILVY------------------EYMPNKSLQEMLFSDGNLVLKWSQRF 184
LLG C + ++V E++P K E L+ D L
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD---FLTLEHLI 142
Query: 185 EIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
VAK +EFL IH D+ N+LL K+ DFGL+R
Sbjct: 143 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 90 VIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQ--TERE-FQNELQILGGLRSPFLVTLL 145
V+GKG G V L + G+ A+K + ++ T++E E+Q+L L P ++ L
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 146 GYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPV 205
+ ++ LV E L + + S + R II V + ++H +
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMH---KNKI 147
Query: 206 IHGDIKPSNVLLDS---DCRGKVSDFGLS 231
+H D+KP N+LL+S D ++ DFGLS
Sbjct: 148 VHRDLKPENLLLESKSKDANIRIIDFGLS 176
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLH 614
GT Y+APE Y EK D++S GV++ +++SG P +
Sbjct: 190 GTAYYIAPEVLHGTY-DEKCDVWSTGVILYILLSGCPPFN 228
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 13/144 (9%)
Query: 85 FDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTF------SLQTEREFQNELQILGGLR 137
++ VIGKG V I R+ G+ A+K +D L TE + + E I L+
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTE-DLKREASICHMLK 84
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSL--QEMLFSDGNLVLKWSQRFEIIMDVAKALE 195
P +V LL +V+E+M L + + +D V + + + +AL
Sbjct: 85 HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDS 219
+ H D +IH D+KP VLL S
Sbjct: 145 YCH---DNNIIHRDVKPHCVLLAS 165
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 18/154 (11%)
Query: 74 TYKELKNATNDFDEANVIGKGGSGTVFLGIARD----GKL----LAIKRLDTFSLQTERE 125
+ +++N F+E+ +G+G +F G+ R+ G+L + +K LD
Sbjct: 1 VFHKIRNEDLIFNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSES 58
Query: 126 FQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLV-LKWSQRF 184
F ++ L LV G C ++ ILV E++ SL L + N + + W
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWK--- 115
Query: 185 EIIMDVAKALEF-LHFGCDPPVIHGDIKPSNVLL 217
++VAK L + +HF + +IHG++ N+LL
Sbjct: 116 ---LEVAKQLAWAMHFLEENTLIHGNVCAKNILL 146
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQ--TERE-FQNELQILGGLR 137
++ + V+GKG G V L + G+ A+K + ++ T++E E+Q+L L
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
P ++ L + ++ LV E L + + S + R II V + ++
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYM 148
Query: 198 HFGCDPPVIHGDIKPSNVLLDS---DCRGKVSDFGLS 231
H ++H D+KP N+LL+S D ++ DFGLS
Sbjct: 149 H---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 182
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLH 614
GT Y+APE Y EK D++S GV++ +++SG P +
Sbjct: 196 GTAYYIAPEVLHGTY-DEKCDVWSTGVILYILLSGCPPFN 234
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 90 VIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQ--TERE-FQNELQILGGLRSPFLVTLL 145
V+GKG G V L + G+ A+K + ++ T++E E+Q+L L P ++ L
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 146 GYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPV 205
+ ++ LV E L + + S + R II V + ++H +
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMH---KNKI 170
Query: 206 IHGDIKPSNVLLDS---DCRGKVSDFGLS 231
+H D+KP N+LL+S D ++ DFGLS
Sbjct: 171 VHRDLKPENLLLESKSKDANIRIIDFGLS 199
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLH 614
GT Y+APE Y EK D++S GV++ +++SG P +
Sbjct: 213 GTAYYIAPEVLHGTY-DEKCDVWSTGVILYILLSGCPPFN 251
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 13/144 (9%)
Query: 85 FDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTF------SLQTEREFQNELQILGGLR 137
++ VIGKG V I R+ G+ A+K +D L TE + + E I L+
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTE-DLKREASICHMLK 86
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSL--QEMLFSDGNLVLKWSQRFEIIMDVAKALE 195
P +V LL +V+E+M L + + +D V + + + +AL
Sbjct: 87 HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 146
Query: 196 FLHFGCDPPVIHGDIKPSNVLLDS 219
+ H D +IH D+KP VLL S
Sbjct: 147 YCH---DNNIIHRDVKPHCVLLAS 167
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 69/168 (41%), Gaps = 32/168 (19%)
Query: 91 IGKGGSGTVF----LGIARDG--KLLAIKRLDTFSLQTE-REFQNELQILGGLRSPF-LV 142
+G+G G V GI + + +A+K L + +E R +EL+IL + +V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 143 TLLGYCMERNKRILVY------------------EYMPNKSLQEMLFSDGNLVLKWSQRF 184
LLG C + ++V E++P K E L+ D L
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD---FLTLEHLI 151
Query: 185 EIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
VAK +EFL IH D+ N+LL K+ DFGL+R
Sbjct: 152 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 69/168 (41%), Gaps = 32/168 (19%)
Query: 91 IGKGGSGTVF----LGIARDG--KLLAIKRLDTFSLQTE-REFQNELQILGGLRSPF-LV 142
+G+G G V GI + + +A+K L + +E R +EL+IL + +V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 143 TLLGYCMERNKRILVY------------------EYMPNKSLQEMLFSDGNLVLKWSQRF 184
LLG C + ++V E++P K E L+ D L
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD---FLTLEHLI 151
Query: 185 EIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
VAK +EFL IH D+ N+LL K+ DFGL+R
Sbjct: 152 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 10/155 (6%)
Query: 83 NDFDEANVIGKGGSGTVFL-GIARDGKLLAIKRLDTFSLQTEREF---QNELQIL-GGLR 137
DFD VIG+G V L + + ++ A+K + + + + Q E +
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 79
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
PFLV L ++ V EY+ L + L + ++ + +++ AL +L
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS--AEISLALNYL 137
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
H + +I+ D+K NVLLDS+ K++D+G+ +
Sbjct: 138 H---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 169
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 69/168 (41%), Gaps = 32/168 (19%)
Query: 91 IGKGGSGTVF----LGIARDG--KLLAIKRLDTFSLQTE-REFQNELQILGGLRSPF-LV 142
+G+G G V GI + + +A+K L + +E R +EL+IL + +V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 143 TLLGYCMERNKRILVY------------------EYMPNKSLQEMLFSDGNLVLKWSQRF 184
LLG C + ++V E++P K E L+ D L
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD---FLTLEHLI 151
Query: 185 EIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
VAK +EFL IH D+ N+LL K+ DFGL+R
Sbjct: 152 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 21/154 (13%)
Query: 91 IGKGGSGTVFL---GIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGY 147
+G G G V L + + + I R + S + + E+ +L L P ++ L +
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 148 CMERNKRILVYE-----YMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCD 202
++ LV E + ++ + M F++ + + II V + +LH
Sbjct: 105 FEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV-------IIKQVLSGVTYLH---K 154
Query: 203 PPVIHGDIKPSNVLLDS---DCRGKVSDFGLSRI 233
++H D+KP N+LL+S D K+ DFGLS +
Sbjct: 155 HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
GT Y+APE Y EK D++S+GV++ ++++G P
Sbjct: 200 GTAYYIAPEVLRKKY-DEKCDVWSIGVILFILLAGYPPF 237
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 17/159 (10%)
Query: 91 IGKGGSGTVFL--GIARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYC 148
+G+GG V L G+ DG A+KR+ Q E Q E + P ++ L+ YC
Sbjct: 37 LGEGGFSYVDLVEGL-HDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC 95
Query: 149 ME----RNKRILVYEYMPNKSL---QEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGC 201
+ +++ L+ + +L E L GN + + Q +++ + + LE +H
Sbjct: 96 LRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTE-DQILWLLLGICRGLEAIH--- 151
Query: 202 DPPVIHGDIKPSNVLLDSDCRGKVSDFG---LSRIKVEG 237
H D+KP+N+LL + + + D G + I VEG
Sbjct: 152 AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEG 190
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 69/168 (41%), Gaps = 32/168 (19%)
Query: 91 IGKGGSGTVF----LGIARDG--KLLAIKRLDTFSLQTE-REFQNELQILGGLRSPF-LV 142
+G+G G V GI + + +A+K L + +E R +EL+IL + +V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 143 TLLGYCMERNKRILVY------------------EYMPNKSLQEMLFSDGNLVLKWSQRF 184
LLG C + ++V E++P K E L+ D L
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD---FLTLEHLI 188
Query: 185 EIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
VAK +EFL IH D+ N+LL K+ DFGL+R
Sbjct: 189 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 233
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 90 VIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQ--TERE-FQNELQILGGLRSPFLVTLL 145
V+GKG G V L + G+ A+K + ++ T++E E+Q+L L P ++ L
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 146 GYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPV 205
+ ++ LV E L + + S + R II V + ++H +
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMH---KNKI 171
Query: 206 IHGDIKPSNVLLDS---DCRGKVSDFGLS 231
+H D+KP N+LL+S D ++ DFGLS
Sbjct: 172 VHRDLKPENLLLESKSKDANIRIIDFGLS 200
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLH 614
GT Y+APE Y EK D++S GV++ +++SG P +
Sbjct: 214 GTAYYIAPEVLHGTY-DEKCDVWSTGVILYILLSGCPPFN 252
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 16/151 (10%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDT--FSLQTEREFQNELQILGGLRSPFLVTLLGY 147
+G G G+V AR + +A+K+L SL R EL++L L+ ++ LL
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 148 CMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFE------IIMDVAKALEFLHFGC 201
+ ++ + ++ +D N ++K SQ ++ + + L+++H
Sbjct: 96 FTPATS---IEDFSEVYLVTTLMGADLNNIVK-SQALSDEHVQFLVYQLLRGLKYIHSAG 151
Query: 202 DPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+IH D+KPSNV ++ D ++ DFGL+R
Sbjct: 152 ---IIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 10/155 (6%)
Query: 83 NDFDEANVIGKGGSGTVFL-GIARDGKLLAIKRLDTFSLQTEREF---QNELQIL-GGLR 137
DFD VIG+G V L + + ++ A+K + + + + Q E +
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 64
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
PFLV L ++ V EY+ L + L + ++ + +++ AL +L
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS--AEISLALNYL 122
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
H + +I+ D+K NVLLDS+ K++D+G+ +
Sbjct: 123 H---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 154
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 27/162 (16%)
Query: 83 NDFDEANVIGKGGSGTVF-LGIARDGKLLAIKRLDTFSLQTE--REFQNELQILGGLRSP 139
ND + +G G G V+ + + G ++A+K++ + E R + +L P
Sbjct: 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCP 84
Query: 140 FLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFE----------IIMD 189
++V G + + E M G K +R + + +
Sbjct: 85 YIVQCFGTFITNTDVFIAMELM------------GTCAEKLKKRMQGPIPERILGKMTVA 132
Query: 190 VAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
+ KAL +L VIH D+KPSN+LLD + K+ DFG+S
Sbjct: 133 IVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGIS 172
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 12/154 (7%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDT--FSLQTEREFQNELQILGGLRSPFLVTLLGY 147
+GKG V + G+ A K ++T S + ++ + E +I L+ P +V L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 148 CMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIH 207
E L+++ + L E + + ++ + + + LE + V+H
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAR-----EYYSEADASHCIQQILEAVLHCHQMGVVH 144
Query: 208 GDIKPSNVLLDSDCRG---KVSDFGLSRIKVEGE 238
D+KP N+LL S +G K++DFGL+ I+VEGE
Sbjct: 145 RDLKPENLLLASKLKGAAVKLADFGLA-IEVEGE 177
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 10/155 (6%)
Query: 83 NDFDEANVIGKGGSGTVFL-GIARDGKLLAIKRLDTFSLQTEREF---QNELQIL-GGLR 137
DFD VIG+G V L + + ++ A+K + + + + Q E +
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 68
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
PFLV L ++ V EY+ L + L + ++ + +++ AL +L
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS--AEISLALNYL 126
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
H + +I+ D+K NVLLDS+ K++D+G+ +
Sbjct: 127 H---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 158
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 15/161 (9%)
Query: 91 IGKGGSGTVFLGIARD-GKLLAIKRL-DTFSLQTEREFQNELQILGGLRSPFLVTL---- 144
+G GG G V I +D G+ +AIK+ S + + E+QI+ L P +V+
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 145 --LGYCMERNKRILVYEYMPNKSLQEMLFSDGNLV-LKWSQRFEIIMDVAKALEFLHFGC 201
L + +L EY L++ L N LK ++ D++ AL +LH
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH--- 138
Query: 202 DPPVIHGDIKPSNVLLDSDCR---GKVSDFGLSRIKVEGEF 239
+ +IH D+KP N++L + K+ D G ++ +GE
Sbjct: 139 ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL 179
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 15/161 (9%)
Query: 91 IGKGGSGTVFLGIARD-GKLLAIKRL-DTFSLQTEREFQNELQILGGLRSPFLVTL---- 144
+G GG G V I +D G+ +AIK+ S + + E+QI+ L P +V+
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 145 --LGYCMERNKRILVYEYMPNKSLQEMLFSDGNLV-LKWSQRFEIIMDVAKALEFLHFGC 201
L + +L EY L++ L N LK ++ D++ AL +LH
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH--- 139
Query: 202 DPPVIHGDIKPSNVLLDSDCR---GKVSDFGLSRIKVEGEF 239
+ +IH D+KP N++L + K+ D G ++ +GE
Sbjct: 140 ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL 180
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 21/150 (14%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIK--RLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYC 148
IG GGS VF + ++ AIK L+ QT ++NE+ L L+
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ---------- 113
Query: 149 MERNKRILVYEYMPNKSLQEMLFSDGNLVLK-WSQRFEIIMDVAKA------LEFLHFGC 201
+K I +Y+Y M+ GN+ L W ++ + I + LE +H
Sbjct: 114 -HSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 172
Query: 202 DPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
++H D+KP+N L+ D K+ DFG++
Sbjct: 173 QHGIVHSDLKPANFLI-VDGMLKLIDFGIA 201
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 13/157 (8%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTEREFQN---ELQILGGLR 137
++++D +GKG V + + L A K ++T L + R+FQ E +I L+
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQ 86
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
P +V L E + LV++ + L E + + ++ + + + LE +
Sbjct: 87 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI-----VAREFYSEADASHCIQQILESI 141
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRG---KVSDFGLS 231
+ ++H ++KP N+LL S +G K++DFGL+
Sbjct: 142 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA 178
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 13/157 (8%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTEREFQN---ELQILGGLR 137
++++D +GKG V + + L A K ++T L + R+FQ E +I L+
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQ 62
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
P +V L E + LV++ + L E + + ++ + + + LE +
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR-----EFYSEADASHCIQQILESI 117
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRG---KVSDFGLS 231
+ ++H ++KP N+LL S +G K++DFGL+
Sbjct: 118 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA 154
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 13/157 (8%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTEREFQN---ELQILGGLR 137
++++D +GKG V + + L A K ++T L + R+FQ E +I L+
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQ 63
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
P +V L E + LV++ + L E + + ++ + + + LE +
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR-----EFYSEADASHCIQQILESI 118
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRG---KVSDFGLS 231
+ ++H ++KP N+LL S +G K++DFGL+
Sbjct: 119 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 13/157 (8%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTEREFQN---ELQILGGLR 137
++++D +GKG V + + L A K ++T L + R+FQ E +I L+
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQ 63
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
P +V L E + LV++ + L E + + ++ + + + LE +
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR-----EFYSEADASHCIQQILESI 118
Query: 198 HFGCDPPVIHGDIKPSNVLLDSDCRG---KVSDFGLS 231
+ ++H ++KP N+LL S +G K++DFGL+
Sbjct: 119 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 10/154 (6%)
Query: 84 DFDEANVIGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTERE----FQNELQIL-GGLRS 138
DFD VIG+G V L + + R+ L + E Q E +
Sbjct: 53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNH 112
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH 198
PFLV L ++ V EY+ L + L + ++ + +++ AL +LH
Sbjct: 113 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS--AEISLALNYLH 170
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ +I+ D+K NVLLDS+ K++D+G+ +
Sbjct: 171 ---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 201
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 565 RELSSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLAS 618
R +T++ GT Y+APE D ++LGVL+ +++GR P ++ S
Sbjct: 205 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGS 258
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 21/150 (14%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIK--RLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYC 148
IG GGS VF + ++ AIK L+ QT ++NE+ L L+
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ---------- 85
Query: 149 MERNKRILVYEYMPNKSLQEMLFSDGNLVLK-WSQRFEIIMDVAK------ALEFLHFGC 201
+K I +Y+Y M+ GN+ L W ++ + I + LE +H
Sbjct: 86 -HSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 144
Query: 202 DPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
++H D+KP+N L+ D K+ DFG++
Sbjct: 145 QHGIVHSDLKPANFLI-VDGMLKLIDFGIA 173
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 21/150 (14%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIK--RLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYC 148
IG GGS VF + ++ AIK L+ QT ++NE+ L L+
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ---------- 66
Query: 149 MERNKRILVYEYMPNKSLQEMLFSDGNLVLK-WSQRFEIIMDVAKA------LEFLHFGC 201
+K I +Y+Y M+ GN+ L W ++ + I + LE +H
Sbjct: 67 -HSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 125
Query: 202 DPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
++H D+KP+N L+ D K+ DFG++
Sbjct: 126 QHGIVHSDLKPANFLI-VDGMLKLIDFGIA 154
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 107 GKLLAIKRLDTFSLQTERE-FQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKS 165
K + +RL + RE + E+ IL +R P ++TL + +L+ E +
Sbjct: 35 AKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGE 94
Query: 166 LQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNV-LLDSDC--- 221
L + L +L + +F + + L+ +H+ + H D+KP N+ LLD +
Sbjct: 95 LFDFLAEKESLTEDEATQF-----LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNP 149
Query: 222 RGKVSDFGLS-RIKVEGEF 239
R K+ DFG++ +I+ EF
Sbjct: 150 RIKLIDFGIAHKIEAGNEF 168
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
GT +VAPE L +AD++S+GV+ +++SG P
Sbjct: 173 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 107 GKLLAIKRLDTFSLQTERE-FQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKS 165
K + +RL + RE + E+ IL +R P ++TL + +L+ E +
Sbjct: 42 AKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGE 101
Query: 166 LQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNV-LLDSDC--- 221
L + L +L + +F + + L+ +H+ + H D+KP N+ LLD +
Sbjct: 102 LFDFLAEKESLTEDEATQF-----LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNP 156
Query: 222 RGKVSDFGLS-RIKVEGEF 239
R K+ DFG++ +I+ EF
Sbjct: 157 RIKLIDFGIAHKIEAGNEF 175
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
GT +VAPE L +AD++S+GV+ +++SG P
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 21/150 (14%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIK--RLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYC 148
IG GGS VF + ++ AIK L+ QT ++NE+ L L+
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ---------- 85
Query: 149 MERNKRILVYEYMPNKSLQEMLFSDGNLVLK-WSQRFEIIMDVAK------ALEFLHFGC 201
+K I +Y+Y M+ GN+ L W ++ + I + LE +H
Sbjct: 86 -HSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 144
Query: 202 DPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
++H D+KP+N L+ D K+ DFG++
Sbjct: 145 QHGIVHSDLKPANFLI-VDGMLKLIDFGIA 173
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 12/163 (7%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIAR-DGKLLAIKRLDT--FSLQTEREFQNELQILGGLRS 138
T+++ IGKG V + G A K ++T S + ++ + E +I L+
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH 198
+V L E LV++ + L E + + ++ + + + LE +
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-----EYYSEADASHCIQQILEAVL 117
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRG---KVSDFGLSRIKVEGE 238
V+H D+KP N+LL S C+G K++DFGL+ I+V+G+
Sbjct: 118 HCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGD 159
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 21/150 (14%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIK--RLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYC 148
IG GGS VF + ++ AIK L+ QT ++NE+ L L+
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ---------- 113
Query: 149 MERNKRILVYEYMPNKSLQEMLFSDGNLVLK-WSQRFEIIMDVAKA------LEFLHFGC 201
+K I +Y+Y M+ GN+ L W ++ + I + LE +H
Sbjct: 114 -HSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 172
Query: 202 DPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
++H D+KP+N L+ D K+ DFG++
Sbjct: 173 QHGIVHSDLKPANFLI-VDGMLKLIDFGIA 201
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 14/150 (9%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDT--FSLQTEREFQNELQILGGLRSPFLVTLLGY 147
+G G G+V AR + +A+K+L SL R EL++L L+ ++ LL
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 148 CMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFE-----IIMDVAKALEFLHFGCD 202
+ ++ + ++ +D N ++K + ++ + + L+++H
Sbjct: 96 FTPATS---IEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG- 151
Query: 203 PPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+IH D+KPSNV ++ D ++ DFGL+R
Sbjct: 152 --IIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 21/150 (14%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIK--RLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYC 148
IG GGS VF + ++ AIK L+ QT ++NE+ L L+
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ---------- 113
Query: 149 MERNKRILVYEYMPNKSLQEMLFSDGNLVLK-WSQRFEIIMDVAKA------LEFLHFGC 201
+K I +Y+Y M+ GN+ L W ++ + I + LE +H
Sbjct: 114 -HSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 172
Query: 202 DPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
++H D+KP+N L+ D K+ DFG++
Sbjct: 173 QHGIVHSDLKPANFLI-VDGMLKLIDFGIA 201
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARDG--KLLAIKRLDTFSLQTEREFQN---ELQILGGLR 137
DF+ V+GKG G V L R G +L A+K L + + + + E ++L
Sbjct: 341 TDFNFLMVLGKGSFGKVMLS-ERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 399
Query: 138 SPFLVTLLGYCMERNKRI-LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEF 196
P +T L C + R+ V EY+ L + G K ++A L F
Sbjct: 400 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRF--KEPHAVFYAAEIAIGLFF 457
Query: 197 LHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
L +I+ D+K NV+LDS+ K++DFG+ +
Sbjct: 458 LQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK 490
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 21/150 (14%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIK--RLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYC 148
IG GGS VF + ++ AIK L+ QT ++NE+ L L+
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ---------- 69
Query: 149 MERNKRILVYEYMPNKSLQEMLFSDGNLVLK-WSQRFEIIMDVAK------ALEFLHFGC 201
+K I +Y+Y M+ GN+ L W ++ + I + LE +H
Sbjct: 70 -HSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 128
Query: 202 DPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
++H D+KP+N L+ D K+ DFG++
Sbjct: 129 QHGIVHSDLKPANFLI-VDGMLKLIDFGIA 157
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 91 IGKGGSGTVF----LGIARDG--KLLAIKRLDTFSLQTE-REFQNELQILGGLRSPF-LV 142
+G+G G V GI + + +A+K L + +E R +EL+IL + +V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 143 TLLGYCMERNKRILV-YEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM----------DVA 191
LLG C + ++V E+ +L L S N + + ++ + VA
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
K +EFL IH D+ N+LL K+ DFGL+R
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLAR 192
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 12/149 (8%)
Query: 90 VIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQ--TERE-FQNELQILGGLRSPFLVTLL 145
V+GKG G V L + G+ A+K + ++ T++E E+Q+L L P + L
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 146 GYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPV 205
+ ++ LV E L + + S + R II V + + H +
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYXH---KNKI 147
Query: 206 IHGDIKPSNVLLDS---DCRGKVSDFGLS 231
+H D+KP N+LL+S D ++ DFGLS
Sbjct: 148 VHRDLKPENLLLESKSKDANIRIIDFGLS 176
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLH 614
GT Y+APE Y EK D++S GV++ +++SG P +
Sbjct: 190 GTAYYIAPEVLHGTY-DEKCDVWSTGVILYILLSGCPPFN 228
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 21/160 (13%)
Query: 83 NDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRL-----DTFSLQTEREFQNELQILGGL 136
+ + V+G G GTV G+ +G+ + I D Q+ + + + +G L
Sbjct: 31 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 90
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-----GNLVLKWSQRFEIIMDVA 191
+V LLG C + + LV +Y+P SL + + L+L W + +A
Sbjct: 91 DHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWG------VQIA 143
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
K + +L + ++H ++ NVLL S + +V+DFG++
Sbjct: 144 KGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVA 180
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 21/160 (13%)
Query: 83 NDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRL-----DTFSLQTEREFQNELQILGGL 136
+ + V+G G GTV G+ +G+ + I D Q+ + + + +G L
Sbjct: 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 72
Query: 137 RSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSD-----GNLVLKWSQRFEIIMDVA 191
+V LLG C + + LV +Y+P SL + + L+L W + +A
Sbjct: 73 DHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWG------VQIA 125
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
K + +L + ++H ++ NVLL S + +V+DFG++
Sbjct: 126 KGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVA 162
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 21/150 (14%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIK--RLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYC 148
IG GGS VF + ++ AIK L+ QT ++NE+ L L+
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ---------- 65
Query: 149 MERNKRILVYEYMPNKSLQEMLFSDGNLVLK-WSQRFEIIMDVAK------ALEFLHFGC 201
+K I +Y+Y M+ GN+ L W ++ + I + LE +H
Sbjct: 66 -HSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 124
Query: 202 DPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
++H D+KP+N L+ D K+ DFG++
Sbjct: 125 QHGIVHSDLKPANFLI-VDGMLKLIDFGIA 153
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 23/173 (13%)
Query: 85 FDEANVIGKGGSGTVFLGIAR--DGKLL--AIKRL--DTFSLQTEREFQNELQILGGLRS 138
F ++GKG G+V + DG + A+K L D + EF E +
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 139 PFLVTLLGYCMERNKR------ILVYEYMPNKSLQEMLFSDG------NLVLKWSQRFEI 186
P + L+G + + +++ +M + L L + NL L+ RF
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF-- 142
Query: 187 IMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEF 239
++D+A +E+L IH D+ N +L D V+DFGLSR G++
Sbjct: 143 MVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDY 192
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 91 IGKGGSGTVF----LGIARDG--KLLAIKRLDTFSLQTE-REFQNELQILGGLRSPF-LV 142
+G+G G V GI + + +A+K L + +E R +EL+IL + +V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 143 TLLGYCMERNKRILV-YEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM----------DVA 191
LLG C + ++V E+ +L L S N + + ++ + VA
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
K +EFL IH D+ N+LL K+ DFGL+R
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR 192
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 205 VIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++H D+KP+N L++ DC KV DFGL+R
Sbjct: 177 ILHRDLKPANCLVNQDCSVKVCDFGLAR 204
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 18/160 (11%)
Query: 84 DFDEANVIGKGGSGTVFLGIARDG-KLLAIKRLD-----TFSLQTEREFQ----NELQIL 133
+++ ++G+G S V I + K A+K +D +FS + +E + E+ IL
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77
Query: 134 GGLRS-PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRF-EIIMDVA 191
+ P ++ L LV++ M L + L L K +++ +++V
Sbjct: 78 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 137
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL L+ ++H D+KP N+LLD D K++DFG S
Sbjct: 138 CALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFS 171
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 107 GKLLAIKRLDTFSLQTERE-FQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKS 165
K + +RL + RE + E+ IL +R P ++TL + +L+ E +
Sbjct: 56 AKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGE 115
Query: 166 LQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNV-LLDSDC--- 221
L + L +L + +F + + L+ +H+ + H D+KP N+ LLD +
Sbjct: 116 LFDFLAEKESLTEDEATQF-----LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNP 170
Query: 222 RGKVSDFGLS-RIKVEGEF 239
R K+ DFG++ +I+ EF
Sbjct: 171 RIKLIDFGIAHKIEAGNEF 189
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
GT +VAPE L +AD++S+GV+ +++SG P
Sbjct: 194 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 18/160 (11%)
Query: 84 DFDEANVIGKGGSGTVFLGIARDG-KLLAIKRLD-----TFSLQTEREFQ----NELQIL 133
+++ ++G+G S V I + K A+K +D +FS + +E + E+ IL
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77
Query: 134 GGLRS-PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRF-EIIMDVA 191
+ P ++ L LV++ M L + L L K +++ +++V
Sbjct: 78 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 137
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL L+ ++H D+KP N+LLD D K++DFG S
Sbjct: 138 CALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFS 171
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 19/132 (14%)
Query: 115 LDTFSLQTEREFQNELQILG--GLRSPFLVTLLGYCMERNKRI-----LVYEYMPNKSLQ 167
+ F LQ ++ +Q+E +I G++ L+ + +R + L+ + SL
Sbjct: 43 VKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIA-AEKRGSNLEVELWLITAFHDKGSLT 101
Query: 168 EMLFSDGNLVLKWSQRFEIIMDVAKALEFLHF--------GCDPPVIHGDIKPSNVLLDS 219
+ L GN++ W++ + +++ L +LH G P + H D K NVLL S
Sbjct: 102 DYL--KGNII-TWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKS 158
Query: 220 DCRGKVSDFGLS 231
D ++DFGL+
Sbjct: 159 DLTAVLADFGLA 170
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Query: 83 NDFDEANVIGKGGSGTVFLGIARDG--KLLAIKRLDTFSLQTEREFQN---ELQILGGLR 137
DF+ V+GKG G V L R G +L A+K L + + + + E ++L
Sbjct: 20 TDFNFLMVLGKGSFGKVMLS-ERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 78
Query: 138 SPFLVTLLGYCMERNKRI-LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEF 196
P +T L C + R+ V EY+ L + G K ++A L F
Sbjct: 79 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRF--KEPHAVFYAAEIAIGLFF 136
Query: 197 LHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
L +I+ D+K NV+LDS+ K++DFG+ +
Sbjct: 137 LQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK 169
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 18/160 (11%)
Query: 84 DFDEANVIGKGGSGTVFLGIARDG-KLLAIKRLD-----TFSLQTEREFQ----NELQIL 133
+++ ++G+G S V I + K A+K +D +FS + +E + E+ IL
Sbjct: 5 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 64
Query: 134 GGLRS-PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRF-EIIMDVA 191
+ P ++ L LV++ M L + L L K +++ +++V
Sbjct: 65 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 124
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
AL L+ ++H D+KP N+LLD D K++DFG S
Sbjct: 125 CALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFS 158
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 184 FEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGL 230
I + +A+A+EFLH ++H D+KPSN+ D KV DFGL
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGL 210
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 35/198 (17%)
Query: 88 ANVIGKGGSGTVFLGIA-RDGKLLAIKRLDTFSLQTEREFQNELQILGGLR-SPFLVTLL 145
+ ++G+G V ++ ++GK A+K ++ + + E++ L + + ++ L+
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 146 GYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPV 205
+ + + LV+E + S+ + + + + R ++ DVA AL+FLH +
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASR--VVRDVAAALDFLH---TKGI 132
Query: 206 IHGDIKPSNVLLDSDCR---GKVSDFGLSRIKVEGEFGMDLFSQDLGKSQELWKSQELSG 262
H D+KP N+L +S + K+ DF DLG +L
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDF------------------DLGSGMKL-------N 167
Query: 263 NLATATETPAISTPVDSA 280
N T TP ++TP SA
Sbjct: 168 NSCTPITTPELTTPCGSA 185
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 28/166 (16%)
Query: 85 FDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTEREFQNELQI---LGGLRSPF 140
F + G+G GTV LG + G +AIK++ +Q R ELQI L L P
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV----IQDPRFRNRELQIMQDLAVLHHPN 80
Query: 141 LVTLLGYCM---ERNKRIL----VYEYMPN------KSLQEMLFSDGNLVLKWSQRFEII 187
+V L Y ER++R + V EY+P+ ++ + +++K +
Sbjct: 81 IVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKV-----FL 135
Query: 188 MDVAKALEFLHFGCDPPVIHGDIKPSNVLL-DSDCRGKVSDFGLSR 232
+ +++ LH V H DIKP NVL+ ++D K+ DFG ++
Sbjct: 136 FQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAK 180
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 14/160 (8%)
Query: 83 NDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFL 141
+D++ +G+G VF GI + + IK L + + LQ L G P +
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXG--GPNI 88
Query: 142 VTLLGYCMERNKRI--LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHF 199
V LL +++ + L++EY+ N + + + + +++ I ++ KAL++ H
Sbjct: 89 VKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY-----YIYELLKALDYCH- 142
Query: 200 GCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGE 238
++H D+KP NV++D + R ++ D+GL+ G+
Sbjct: 143 --SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 180
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 37/171 (21%)
Query: 91 IGKGGSGTVFL----GIARD----GKLLAIKRL-------DTFSLQTEREFQNELQILGG 135
+G+G G V + GI +D +A+K L D L +E E ++++G
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM---MKMIGK 99
Query: 136 LRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFS----------DGNLVLKWSQRFE 185
++ ++TLLG C + ++ EY +L+E L + D N V + F+
Sbjct: 100 HKN--IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 186 IIM----DVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++ +A+ +E+L IH D+ NVL+ + K++DFGL+R
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 71/164 (43%), Gaps = 25/164 (15%)
Query: 91 IGKGGSGTVF----LGIARDG--KLLAIKRLDTFSLQTE-REFQNELQILGGLRSPF-LV 142
+G+G G V GI + + +A+K L + +E R +EL+IL + +V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 143 TLLGYCMERNKRILV-YEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMD------------ 189
LLG C + ++V E+ +L L S N + + ++ D
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 190 -VAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
VAK +EFL IH D+ N+LL K+ DFGL+R
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 14/160 (8%)
Query: 83 NDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFL 141
+D++ +G+G VF GI + + IK L + + LQ L G P +
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXG--GPNI 89
Query: 142 VTLLGYCMERNKRI--LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHF 199
V LL +++ + L++EY+ N + + + + +++ I ++ KAL++ H
Sbjct: 90 VKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY-----YIYELLKALDYCH- 143
Query: 200 GCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGE 238
++H D+KP NV++D + R ++ D+GL+ G+
Sbjct: 144 --SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 181
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 14/160 (8%)
Query: 83 NDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFL 141
+D++ +G+G VF GI + + IK L + + LQ L G P +
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXG--GPNI 88
Query: 142 VTLLGYCMERNKRI--LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHF 199
V LL +++ + L++EY+ N + + + + +++ I ++ KAL++ H
Sbjct: 89 VKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY-----YIYELLKALDYCH- 142
Query: 200 GCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGE 238
++H D+KP NV++D + R ++ D+GL+ G+
Sbjct: 143 --SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 180
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 14/160 (8%)
Query: 83 NDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFL 141
+D++ +G+G VF GI + + IK L + + LQ L G P +
Sbjct: 33 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCG--GPNI 90
Query: 142 VTLLGYCMERNKRI--LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHF 199
V LL +++ + L++EY+ N + + + + +++ I ++ KAL++ H
Sbjct: 91 VKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY-----YIYELLKALDYCH- 144
Query: 200 GCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGE 238
++H D+KP NV++D + R ++ D+GL+ G+
Sbjct: 145 --SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 182
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 14/160 (8%)
Query: 83 NDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFL 141
+D++ +G+G VF GI + + IK L + + LQ L G P +
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXG--GPNI 88
Query: 142 VTLLGYCMERNKRI--LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHF 199
V LL +++ + L++EY+ N + + + + +++ I ++ KAL++ H
Sbjct: 89 VKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY-----YIYELLKALDYCH- 142
Query: 200 GCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGE 238
++H D+KP NV++D + R ++ D+GL+ G+
Sbjct: 143 --SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 180
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 14/160 (8%)
Query: 83 NDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFL 141
+D++ +G+G VF GI + + IK L + + LQ L G P +
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCG--GPNI 89
Query: 142 VTLLGYCMERNKRI--LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHF 199
V LL +++ + L++EY+ N + + + + +++ I ++ KAL++ H
Sbjct: 90 VKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY-----YIYELLKALDYCH- 143
Query: 200 GCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGE 238
++H D+KP NV++D + R ++ D+GL+ G+
Sbjct: 144 --SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 181
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 14/160 (8%)
Query: 83 NDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFL 141
+D++ +G+G VF GI + + IK L + + LQ L G P +
Sbjct: 52 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXG--GPNI 109
Query: 142 VTLLGYCMERNKRI--LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHF 199
V LL +++ + L++EY+ N + + + + +++ I ++ KAL++ H
Sbjct: 110 VKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY-----YIYELLKALDYCH- 163
Query: 200 GCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGE 238
++H D+KP NV++D + R ++ D+GL+ G+
Sbjct: 164 --SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 201
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 18/166 (10%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQN------ 128
KE + + + ++G GG G+V+ GI D +AIK ++ + E N
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 129 ELQILGGLRSPF--LVTLLGYCMERNKRILVYEYM-PNKSLQEMLFSDGNLVLKWSQRFE 185
E+ +L + S F ++ LL + + +L+ E M P + L + + G L + ++ F
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSF- 119
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG--KVSDFG 229
V +A+ H C V+H DIK N+L+D + RG K+ DFG
Sbjct: 120 -FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLN-RGELKLIDFG 160
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 14/160 (8%)
Query: 83 NDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFL 141
+D++ +G+G VF GI + + IK L + + LQ L G P +
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCG--GPNI 88
Query: 142 VTLLGYCMERNKRI--LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHF 199
V LL +++ + L++EY+ N + + + + +++ I ++ KAL++ H
Sbjct: 89 VKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY-----YIYELLKALDYCH- 142
Query: 200 GCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGE 238
++H D+KP NV++D + R ++ D+GL+ G+
Sbjct: 143 --SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 180
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 10/158 (6%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSL----QTEREFQNELQILGGLRSPFLVTLLG 146
+GKGG + D K + ++ S+ + + E+ I L +P +V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 147 YCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVI 206
+ + + +V E +SL E L V + R+ + + +++LH + VI
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARY-FMRQTIQGVQYLH---NNRVI 164
Query: 207 HGDIKPSNVLLDSDCRGKVSDFGL-SRIKVEGEFGMDL 243
H D+K N+ L+ D K+ DFGL ++I+ +GE DL
Sbjct: 165 HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL 202
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 14/160 (8%)
Query: 83 NDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFL 141
+D++ +G+G VF GI + + IK L + + LQ L G P +
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCG--GPNI 88
Query: 142 VTLLGYCMERNKRI--LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHF 199
V LL +++ + L++EY+ N + + + + +++ I ++ KAL++ H
Sbjct: 89 VKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY-----YIYELLKALDYCH- 142
Query: 200 GCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGE 238
++H D+KP NV++D + R ++ D+GL+ G+
Sbjct: 143 --SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 180
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 72/179 (40%), Gaps = 32/179 (17%)
Query: 83 NDFDEANVIGKGGSGTVF----LGIARDGKLL--AIKRLDTFSLQTERE-FQNELQILGG 135
N+ +G G G V G+ ++ +L A+K L + + E+E +EL+I+
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 136 L-RSPFLVTLLGYCMERNKRILVYEY----------------MPNKSLQ-----EMLFSD 173
L + +V LLG C +++ EY M SL E L +
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 174 GNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
L+ VA+ + FL IH D+ NVLL + K+ DFGL+R
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 206
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 14/160 (8%)
Query: 83 NDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFL 141
+D++ +G+G VF GI + + IK L + + LQ L G P +
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLMG--GPNI 88
Query: 142 VTLLGYCMERNKRI--LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHF 199
V LL +++ + L++EY+ N + + + + +++ I ++ KAL++ H
Sbjct: 89 VKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY-----YIYELLKALDYCH- 142
Query: 200 GCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGE 238
++H D+KP NV++D + R ++ D+GL+ G+
Sbjct: 143 --SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 180
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 10/158 (6%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSL----QTEREFQNELQILGGLRSPFLVTLLG 146
+GKGG + D K + ++ S+ + + E+ I L +P +V G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 147 YCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVI 206
+ + + +V E +SL E L V + R+ + + +++LH + VI
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARY-FMRQTIQGVQYLH---NNRVI 148
Query: 207 HGDIKPSNVLLDSDCRGKVSDFGL-SRIKVEGEFGMDL 243
H D+K N+ L+ D K+ DFGL ++I+ +GE DL
Sbjct: 149 HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL 186
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 59/138 (42%), Gaps = 18/138 (13%)
Query: 110 LAIKRL-DTFSLQTEREFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQE 168
+AIK L D EF++E + L+ P +V LLG + +++ Y + L E
Sbjct: 42 VAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHE 101
Query: 169 MLF----------SDGNLVLKWSQR----FEIIMDVAKALEFLHFGCDPPVIHGDIKPSN 214
L +D + +K + ++ +A +E+L V+H D+ N
Sbjct: 102 FLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRN 158
Query: 215 VLLDSDCRGKVSDFGLSR 232
VL+ K+SD GL R
Sbjct: 159 VLVYDKLNVKISDLGLFR 176
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 59/138 (42%), Gaps = 18/138 (13%)
Query: 110 LAIKRL-DTFSLQTEREFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQE 168
+AIK L D EF++E + L+ P +V LLG + +++ Y + L E
Sbjct: 59 VAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHE 118
Query: 169 MLF----------SDGNLVLKWSQR----FEIIMDVAKALEFLHFGCDPPVIHGDIKPSN 214
L +D + +K + ++ +A +E+L V+H D+ N
Sbjct: 119 FLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRN 175
Query: 215 VLLDSDCRGKVSDFGLSR 232
VL+ K+SD GL R
Sbjct: 176 VLVYDKLNVKISDLGLFR 193
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 20/167 (11%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIARDGKLLA-------IKRLDTFSLQTEREFQNELQILG 134
T ++ +GKG F + R K+LA I S + ++ + E +I
Sbjct: 10 TEEYQLFEELGKGA----FSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICR 65
Query: 135 GLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKAL 194
L+ P +V L E L+++ + L E + + ++ + + + L
Sbjct: 66 LLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAR-----EYYSEADASHCIQQIL 120
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRG---KVSDFGLSRIKVEGE 238
E + V+H ++KP N+LL S +G K++DFGL+ I+VEGE
Sbjct: 121 EAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGE 166
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDS---DCRGKVSDFGLS 231
II V + ++H ++H D+KP N+LL+S DC K+ DFGLS
Sbjct: 126 IIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLH 614
GT Y+APE Y EK D++S GV++ +++SG P +
Sbjct: 185 GTAYYIAPEVLRGTY-DEKCDVWSAGVILYILLSGTPPFY 223
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 69/168 (41%), Gaps = 34/168 (20%)
Query: 91 IGKGGSGTVF----LGIARDG--KLLAIKRLDTFSLQTE-REFQNELQILGGLRSPF-LV 142
+G+G G V GI + + +A+K L + +E R +EL+IL + +V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 143 TLLGYCMERNKRILVY------------------EYMPNKSLQEMLFSDGNLVLKWSQRF 184
LLG C + ++V E++P K E L+ D L
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKP--EDLYKD---FLTLEHLI 151
Query: 185 EIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
VAK +EFL IH D+ N+LL K+ DFGL+R
Sbjct: 152 XYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 12/163 (7%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIA-RDGKLLAIKRLDT--FSLQTEREFQNELQILGGLRS 138
T+++ +GKG V + G+ A K ++T S + ++ + E +I L+
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH 198
P +V L E LV++ + L E + + + I + +++ H
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA--REYYSEADASHCIQQILESVNHCH 120
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRG---KVSDFGLSRIKVEGE 238
++H D+KP N+LL S +G K++DFGL+ I+V+G+
Sbjct: 121 LNG---IVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGD 159
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 67/165 (40%), Gaps = 24/165 (14%)
Query: 88 ANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTERE-FQNELQILGGLRSPF-LVTL 144
A GK T + I D + +A+K L + TERE +EL++L L + +V L
Sbjct: 56 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNL 115
Query: 145 LGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM---------------- 188
LG C +++ EY L L + + S+ IM
Sbjct: 116 LGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFI-CSKTSPAIMEDDELALDLEDLLSFS 174
Query: 189 -DVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
VAK + FL IH D+ N+LL K+ DFGL+R
Sbjct: 175 YQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR 216
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 91 IGKGGSGTVFLGIARDGKL-LAIKRLDTFSL-QTERE-FQNELQILGGLRSPFLVTLLGY 147
IG+G TV+ G+ + + +A L L ++ER+ F+ E + L GL+ P +V
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 148 --CMERNKR--ILVYEYMPNKSLQEML----FSDGNLVLKWSQRFEIIMDVAKALEFLHF 199
+ K+ +LV E + +L+ L ++ W ++ + K L+FLH
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQ------ILKGLQFLHT 147
Query: 200 GCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIK 234
PP+IH D+K N+ + K+ D GL+ +K
Sbjct: 148 RT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 67/165 (40%), Gaps = 24/165 (14%)
Query: 88 ANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTERE-FQNELQILGGLRSPF-LVTL 144
A GK T + I D + +A+K L + TERE +EL++L L + +V L
Sbjct: 49 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNL 108
Query: 145 LGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM---------------- 188
LG C +++ EY L L + + S+ IM
Sbjct: 109 LGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFI-CSKTSPAIMEDDELALDLEDLLSFS 167
Query: 189 -DVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
VAK + FL IH D+ N+LL K+ DFGL+R
Sbjct: 168 YQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR 209
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 67/165 (40%), Gaps = 24/165 (14%)
Query: 88 ANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTERE-FQNELQILGGLRSPF-LVTL 144
A GK T + I D + +A+K L + TERE +EL++L L + +V L
Sbjct: 56 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNL 115
Query: 145 LGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM---------------- 188
LG C +++ EY L L + + S+ IM
Sbjct: 116 LGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFI-CSKTSPAIMEDDELALDLEDLLSFS 174
Query: 189 -DVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
VAK + FL IH D+ N+LL K+ DFGL+R
Sbjct: 175 YQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR 216
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 67/165 (40%), Gaps = 24/165 (14%)
Query: 88 ANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTERE-FQNELQILGGLRSPF-LVTL 144
A GK T + I D + +A+K L + TERE +EL++L L + +V L
Sbjct: 33 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNL 92
Query: 145 LGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM---------------- 188
LG C +++ EY L L + + S+ IM
Sbjct: 93 LGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFI-CSKTSPAIMEDDELALDLEDLLSFS 151
Query: 189 -DVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
VAK + FL IH D+ N+LL K+ DFGL+R
Sbjct: 152 YQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR 193
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 12/163 (7%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIA-RDGKLLAIKRLDT--FSLQTEREFQNELQILGGLRS 138
T+++ +GKG V + G+ A K ++T S + ++ + E +I L+
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 139 PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH 198
P +V L E LV++ + L E + + + I + +++ H
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA--REYYSEADASHCIQQILESVNHCH 120
Query: 199 FGCDPPVIHGDIKPSNVLLDSDCRG---KVSDFGLSRIKVEGE 238
++H D+KP N+LL S +G K++DFGL+ I+V+G+
Sbjct: 121 LN---GIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGD 159
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 67/165 (40%), Gaps = 24/165 (14%)
Query: 88 ANVIGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTERE-FQNELQILGGLRSPF-LVTL 144
A GK T + I D + +A+K L + TERE +EL++L L + +V L
Sbjct: 51 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNL 110
Query: 145 LGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM---------------- 188
LG C +++ EY L L + + S+ IM
Sbjct: 111 LGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFI-CSKTSPAIMEDDELALDLEDLLSFS 169
Query: 189 -DVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
VAK + FL IH D+ N+LL K+ DFGL+R
Sbjct: 170 YQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR 211
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDS---DCRGKVSDFGLS 231
II V + ++H ++H D+KP N+LL+S DC K+ DFGLS
Sbjct: 126 IIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLH 614
GT Y+APE G EK D++S GV++ +++SG P +
Sbjct: 185 GTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFY 223
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDS---DCRGKVSDFGLS 231
II V + ++H ++H D+KP N+LL+S DC K+ DFGLS
Sbjct: 126 IIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLH 614
GT Y+APE G EK D++S GV++ +++SG P +
Sbjct: 185 GTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFY 223
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 75/166 (45%), Gaps = 27/166 (16%)
Query: 91 IGKGGSGTVFL----GIARDG----KLLAIKRLDTFSLQTE-REFQNELQILGGL-RSPF 140
+G+G G V L G+ +D +A+K L + + + + + +E++++ + +
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 141 LVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQR--------------FEI 186
++ LLG C + ++ EY +L+E L + L++S
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 187 IMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
VA+ +E+L IH D+ NVL+ D K++DFGL+R
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 190
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 75/166 (45%), Gaps = 27/166 (16%)
Query: 91 IGKGGSGTVFL----GIARDG----KLLAIKRLDTFSLQTE-REFQNELQILGGL-RSPF 140
+G+G G V L G+ +D +A+K L + + + + + +E++++ + +
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 141 LVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQR--------------FEI 186
++ LLG C + ++ EY +L+E L + L++S
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 187 IMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
VA+ +E+L IH D+ NVL+ D K++DFGL+R
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 187
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 20/161 (12%)
Query: 82 TNDFDEANVIGKGGSGTVFL------GIARDGKLLAIKRLDTFSLQTEREFQNELQILGG 135
++ + +G G G V L G R K+ IK+ + +E+ +L
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKI--IKKSSVTTTSNSGALLDEVAVLKQ 60
Query: 136 LRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ--RFEIIMDVAKA 193
L P ++ L + ++ LV E L F + L K+S+ I+ V
Sbjct: 61 LDHPNIMKLYEFFEDKRNYYLVMEVYRGGEL----FDEIILRQKFSEVDAAVIMKQVLSG 116
Query: 194 LEFLHFGCDPPVIHGDIKPSNVLLDSDCRG---KVSDFGLS 231
+LH ++H D+KP N+LL+S R K+ DFGLS
Sbjct: 117 TTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 154
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
GT Y+APE Y EK D++S GV++ +++ G P
Sbjct: 168 GTAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCGYPPF 205
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 20/165 (12%)
Query: 78 LKNATNDFDEANVIGKGGSGTVFL------GIARDGKLLAIKRLDTFSLQTEREFQNELQ 131
+ ++ + +G G G V L G R K+ IK+ + +E+
Sbjct: 16 FQGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKI--IKKSSVTTTSNSGALLDEVA 73
Query: 132 ILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQ--RFEIIMD 189
+L L P ++ L + ++ LV E L F + L K+S+ I+
Sbjct: 74 VLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGEL----FDEIILRQKFSEVDAAVIMKQ 129
Query: 190 VAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG---KVSDFGLS 231
V +LH ++H D+KP N+LL+S R K+ DFGLS
Sbjct: 130 VLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 171
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
GT Y+APE Y EK D++S GV++ +++ G P
Sbjct: 185 GTAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCGYPPF 222
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 27/166 (16%)
Query: 91 IGKGGSGTVFL----GIARD----GKLLAIKRL-DTFSLQTEREFQNELQILGGL-RSPF 140
+G+G G V + GI +D +A+K L D + + + +E++++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 141 LVTLLGYCMERNKRILVYEYMPNKSLQEMLFS----------DGNLVLKWSQRFEIIM-- 188
++ LLG C + ++ EY +L+E L + D N V + F+ ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 189 --DVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+A+ +E+L IH D+ NVL+ + K++DFGL+R
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 37/171 (21%)
Query: 91 IGKGGSGTVFL----GIARD----GKLLAIKRL-------DTFSLQTEREFQNELQILGG 135
+G+G G V + GI +D +A+K L D L +E E ++++G
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM---MKMIGK 99
Query: 136 LRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFS----------DGNLVLKWSQRFE 185
++ ++ LLG C + ++ EY +L+E L + D N V + F+
Sbjct: 100 HKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 186 IIM----DVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++ +A+ +E+L IH D+ NVL+ + K++DFGL+R
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 75/166 (45%), Gaps = 27/166 (16%)
Query: 91 IGKGGSGTVFL----GIARDG----KLLAIKRLDTFSLQTE-REFQNELQILGGL-RSPF 140
+G+G G V L G+ +D +A+K L + + + + + +E++++ + +
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 141 LVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQR--------------FEI 186
++ LLG C + ++ EY +L+E L + L++S
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 187 IMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
VA+ +E+L IH D+ NVL+ D K++DFGL+R
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 191
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 37/171 (21%)
Query: 91 IGKGGSGTVFL----GIARD----GKLLAIKRL-------DTFSLQTEREFQNELQILGG 135
+G+G G V + GI +D +A+K L D L +E E ++++G
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM---MKMIGK 99
Query: 136 LRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFS----------DGNLVLKWSQRFE 185
++ ++ LLG C + ++ EY +L+E L + D N V + F+
Sbjct: 100 HKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 186 IIM----DVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++ +A+ +E+L IH D+ NVL+ + K++DFGL+R
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 37/171 (21%)
Query: 91 IGKGGSGTVFL----GIARD----GKLLAIKRL-------DTFSLQTEREFQNELQILGG 135
+G+G G V + GI +D +A+K L D L +E E ++++G
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM---MKMIGK 99
Query: 136 LRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFS----------DGNLVLKWSQRFE 185
++ ++ LLG C + ++ EY +L+E L + D N V + F+
Sbjct: 100 HKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFK 157
Query: 186 IIM----DVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++ +A+ +E+L IH D+ NVL+ + K++DFGL+R
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 75/166 (45%), Gaps = 27/166 (16%)
Query: 91 IGKGGSGTVFL----GIARDG----KLLAIKRLDTFSLQTE-REFQNELQILGGL-RSPF 140
+G+G G V L G+ +D +A+K L + + + + + +E++++ + +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 141 LVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQR--------------FEI 186
++ LLG C + ++ EY +L+E L + L++S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 187 IMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
VA+ +E+L IH D+ NVL+ D K++DFGL+R
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 75/166 (45%), Gaps = 27/166 (16%)
Query: 91 IGKGGSGTVFL----GIARDG----KLLAIKRLDTFSLQTE-REFQNELQILGGL-RSPF 140
+G+G G V L G+ +D +A+K L + + + + + +E++++ + +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 141 LVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQR--------------FEI 186
++ LLG C + ++ EY +L+E L + L++S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 187 IMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
VA+ +E+L IH D+ NVL+ D K++DFGL+R
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGG--LRSPFLVTLLGYC 148
+GKG G V+ G+ G+ +A+K FS + E+ + E +I LR ++ +
Sbjct: 16 VGKGRYGEVWRGLWH-GESVAVK---IFSSRDEQSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 149 M-ERNKRI---LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH---FGC 201
M RN L+ Y + SL + L L+ + + A L LH FG
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFL---QRQTLEPHLALRLAVSAACGLAHLHVEIFGT 128
Query: 202 D--PPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEFGMDL 243
P + H D K NVL+ S+ + ++D GL+ + +G +D+
Sbjct: 129 QGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDI 172
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 17/173 (9%)
Query: 79 KNATNDFDEANVIGKGGSGTV------FLGIARDGKLLAIKRLDTFSLQTERE-FQNELQ 131
+N + +D +G G V G+ K + +R + RE + E+
Sbjct: 7 ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 132 ILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVA 191
IL ++ P ++TL + IL+ E + L + L +L + + F + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF--LKQIL 124
Query: 192 KALEFLHFGCDPPVIHGDIKPSNV-LLDSDC---RGKVSDFGLS-RIKVEGEF 239
+ +LH + H D+KP N+ LLD + R K+ DFGL+ +I EF
Sbjct: 125 NGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHL 634
GT +VAPE L +AD++S+GV+ +++SG P L + AN+ +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF--LGDTKQETLANVSA----- 231
Query: 635 AQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTPELRPDIGETVR 683
V+ +D+Y ++L + L K P+ R I ++++
Sbjct: 232 ---------VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 17/173 (9%)
Query: 79 KNATNDFDEANVIGKGGSGTV------FLGIARDGKLLAIKRLDTFSLQTERE-FQNELQ 131
+N + +D +G G V G+ K + +R + RE + E+
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 132 ILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVA 191
IL ++ P ++TL + IL+ E + L + L +L + + F + +
Sbjct: 66 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF--LKQIL 123
Query: 192 KALEFLHFGCDPPVIHGDIKPSNV-LLDSDC---RGKVSDFGLS-RIKVEGEF 239
+ +LH + H D+KP N+ LLD + R K+ DFGL+ +I EF
Sbjct: 124 NGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 173
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHL 634
GT +VAPE L +AD++S+GV+ +++SG P L + AN+ +
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF--LGDTKQETLANVSA----- 230
Query: 635 AQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTPELRPDIGETVR 683
V+ +D+Y ++L + L K P+ R I ++++
Sbjct: 231 ---------VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 270
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 17/173 (9%)
Query: 79 KNATNDFDEANVIGKGGSGTV------FLGIARDGKLLAIKRLDTFSLQTERE-FQNELQ 131
+N + +D +G G V G+ K + +R + RE + E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 132 ILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVA 191
IL ++ P ++TL + IL+ E + L + L +L + + F + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF--LKQIL 124
Query: 192 KALEFLHFGCDPPVIHGDIKPSNV-LLDSDC---RGKVSDFGLS-RIKVEGEF 239
+ +LH + H D+KP N+ LLD + R K+ DFGL+ +I EF
Sbjct: 125 NGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHL 634
GT +VAPE L +AD++S+GV+ +++SG P L + AN+ +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF--LGDTKQETLANVSA----- 231
Query: 635 AQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTPELRPDIGETVR 683
V+ +D+Y ++L + L K P+ R I ++++
Sbjct: 232 ---------VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 17/173 (9%)
Query: 79 KNATNDFDEANVIGKGGSGTV------FLGIARDGKLLAIKRLDTFSLQTERE-FQNELQ 131
+N + +D +G G V G+ K + +R + RE + E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 132 ILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVA 191
IL ++ P ++TL + IL+ E + L + L +L + + F + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF--LKQIL 124
Query: 192 KALEFLHFGCDPPVIHGDIKPSNV-LLDSDC---RGKVSDFGLS-RIKVEGEF 239
+ +LH + H D+KP N+ LLD + R K+ DFGL+ +I EF
Sbjct: 125 NGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHL 634
GT +VAPE L +AD++S+GV+ +++SG P L + AN+ +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF--LGDTKQETLANVSA----- 231
Query: 635 AQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTPELRPDIGETVR 683
V+ +D+Y ++L + L K P+ R I ++++
Sbjct: 232 ---------VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 18/185 (9%)
Query: 56 RSRTIPFDSNAPLKLQRFTYKELKNAT---NDFDEANVIGKGGSGTVF-LGIARDGKLLA 111
+ R + F A LQ Y + + F + +G G G VF + DG+L A
Sbjct: 27 QPRRVSFRGEASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYA 86
Query: 112 IKRLDTFSLQTEREFQNELQILGGLRSPFLVTLLGYCM------ERNKRILVYEYMPNKS 165
+KR S+ R ++ + L + S V C+ E + + + S
Sbjct: 87 VKR----SMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELCGPS 142
Query: 166 LQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKV 225
LQ+ + G L +Q + + D AL LH ++H D+KP+N+ L R K+
Sbjct: 143 LQQHCEAWGA-SLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKL 198
Query: 226 SDFGL 230
DFGL
Sbjct: 199 GDFGL 203
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 17/173 (9%)
Query: 79 KNATNDFDEANVIGKGGSGTV------FLGIARDGKLLAIKRLDTFSLQTERE-FQNELQ 131
+N + +D +G G V G+ K + +R + RE + E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 132 ILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVA 191
IL ++ P ++TL + IL+ E + L + L +L + + F + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF--LKQIL 124
Query: 192 KALEFLHFGCDPPVIHGDIKPSNV-LLDSDC---RGKVSDFGLS-RIKVEGEF 239
+ +LH + H D+KP N+ LLD + R K+ DFGL+ +I EF
Sbjct: 125 NGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHL 634
GT +VAPE L +AD++S+GV+ +++SG P L + AN+ +
Sbjct: 179 GTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF--LGDTKQETLANVSA----- 231
Query: 635 AQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTPELRPDIGETVR 683
V+ +D+Y ++L + L K P+ R I ++++
Sbjct: 232 ---------VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 17/173 (9%)
Query: 79 KNATNDFDEANVIGKGGSGTV------FLGIARDGKLLAIKRLDTFSLQTERE-FQNELQ 131
+N + +D +G G V G+ K + +R + RE + E+
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 132 ILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVA 191
IL ++ P ++TL + IL+ E + L + L +L + + F + +
Sbjct: 66 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF--LKQIL 123
Query: 192 KALEFLHFGCDPPVIHGDIKPSNV-LLDSDC---RGKVSDFGLS-RIKVEGEF 239
+ +LH + H D+KP N+ LLD + R K+ DFGL+ +I EF
Sbjct: 124 NGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 173
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHL 634
GT +VAPE L +AD++S+GV+ +++SG P L + AN+ +
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF--LGDTKQETLANVSA----- 230
Query: 635 AQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTPELRPDIGETVR 683
V+ +D+Y ++L + L K P+ R I ++++
Sbjct: 231 ---------VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 270
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 10/153 (6%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSL----QTEREFQNELQILGGLRSPFLVTLLG 146
+GKGG + D K + ++ S+ + + E+ I L +P +V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 147 YCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVI 206
+ + + +V E +SL E L V + R+ + + +++LH + VI
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARY-FMRQTIQGVQYLH---NNRVI 164
Query: 207 HGDIKPSNVLLDSDCRGKVSDFGL-SRIKVEGE 238
H D+K N+ L+ D K+ DFGL ++I+ +GE
Sbjct: 165 HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE 197
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 10/153 (6%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSL----QTEREFQNELQILGGLRSPFLVTLLG 146
+GKGG + D K + ++ S+ + + E+ I L +P +V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 147 YCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVI 206
+ + + +V E +SL E L V + R+ + + +++LH + VI
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARY-FMRQTIQGVQYLH---NNRVI 164
Query: 207 HGDIKPSNVLLDSDCRGKVSDFGL-SRIKVEGE 238
H D+K N+ L+ D K+ DFGL ++I+ +GE
Sbjct: 165 HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE 197
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 17/173 (9%)
Query: 79 KNATNDFDEANVIGKGGSGTV------FLGIARDGKLLAIKRLDTFSLQTERE-FQNELQ 131
+N + +D +G G V G+ K + +R + RE + E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 132 ILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVA 191
IL ++ P ++TL + IL+ E + L + L +L + + F + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF--LKQIL 124
Query: 192 KALEFLHFGCDPPVIHGDIKPSNV-LLDSDC---RGKVSDFGLS-RIKVEGEF 239
+ +LH + H D+KP N+ LLD + R K+ DFGL+ +I EF
Sbjct: 125 NGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHL 634
GT +VAPE L +AD++S+GV+ +++SG P L + AN+ +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF--LGDTKQETLANVSA----- 231
Query: 635 AQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTPELRPDIGETVR 683
V+ +D+Y ++L + L K P+ R I ++++
Sbjct: 232 ---------VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 17/173 (9%)
Query: 79 KNATNDFDEANVIGKGGSGTV------FLGIARDGKLLAIKRLDTFSLQTERE-FQNELQ 131
+N + +D +G G V G+ K + +R + RE + E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 132 ILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVA 191
IL ++ P ++TL + IL+ E + L + L +L + + F + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF--LKQIL 124
Query: 192 KALEFLHFGCDPPVIHGDIKPSNV-LLDSDC---RGKVSDFGLS-RIKVEGEF 239
+ +LH + H D+KP N+ LLD + R K+ DFGL+ +I EF
Sbjct: 125 NGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHL 634
GT +VAPE L +AD++S+GV+ +++SG P L + AN+ +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF--LGDTKQETLANVSA----- 231
Query: 635 AQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTPELRPDIGETVR 683
V+ +D+Y ++L + L K P+ R I ++++
Sbjct: 232 ---------VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 75/166 (45%), Gaps = 27/166 (16%)
Query: 91 IGKGGSGTVFL----GIARDG----KLLAIKRLDTFSLQTE-REFQNELQILGGL-RSPF 140
+G+G G V L G+ +D +A+K L + + + + + +E++++ + +
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 141 LVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQR--------------FEI 186
++ LLG C + ++ EY +L+E L + L++S
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 187 IMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
VA+ +E+L IH D+ NVL+ D K++DFGL+R
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 239
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 37/171 (21%)
Query: 91 IGKGGSGTVFL----GIARD----GKLLAIKRL-------DTFSLQTEREFQNELQILGG 135
+G+G G V + GI +D +A+K L D L +E E ++++G
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM---MKMIGK 99
Query: 136 LRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFS----------DGNLVLKWSQRFE 185
++ ++ LLG C + ++ EY +L+E L + D N V + F+
Sbjct: 100 HKN--IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 186 IIM----DVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++ +A+ +E+L IH D+ NVL+ + K++DFGL+R
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 7/57 (12%)
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCR---GKVSDFGL-SRIKVEGE 238
++ DVA AL+FLH + + H D+KP N+L + + K+ DFGL S IK+ G+
Sbjct: 116 VVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGD 169
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 17/173 (9%)
Query: 79 KNATNDFDEANVIGKGGSGTV------FLGIARDGKLLAIKRLDTFSLQTERE-FQNELQ 131
+N + +D +G G V G+ K + +R + RE + E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 132 ILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVA 191
IL ++ P ++TL + IL+ E + L + L +L + + F + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF--LKQIL 124
Query: 192 KALEFLHFGCDPPVIHGDIKPSNV-LLDSDC---RGKVSDFGLS-RIKVEGEF 239
+ +LH + H D+KP N+ LLD + R K+ DFGL+ +I EF
Sbjct: 125 NGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHL 634
GT +VAPE L +AD++S+GV+ +++SG P L + AN+ +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF--LGDTKQETLANVSA----- 231
Query: 635 AQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTPELRPDIGETVR 683
V+ +D+Y ++L + L K P+ R I ++++
Sbjct: 232 ---------VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 20/116 (17%)
Query: 125 EFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRF 184
E NE+ +L L P ++ L ++ LV E+ L E + + +F
Sbjct: 92 EIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN--------RHKF 143
Query: 185 E------IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLD---SDCRGKVSDFGLS 231
+ I+ + + +LH ++H DIKP N+LL+ S K+ DFGLS
Sbjct: 144 DECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLS 196
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 549 NKNSMGS----DMWSGDLFSRELSSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLIL 604
NKNS+ + D FS++ + GT Y+APE Y EK D++S GV++
Sbjct: 181 NKNSLLNIKIVDFGLSSFFSKDYKLRDRL-GTAYYIAPEVLKKKY-NEKCDVWSCGVIMY 238
Query: 605 VIVSGRRPL 613
+++ G P
Sbjct: 239 ILLCGYPPF 247
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 17/173 (9%)
Query: 79 KNATNDFDEANVIGKGGSGTV------FLGIARDGKLLAIKRLDTFSLQTERE-FQNELQ 131
+N + +D +G G V G+ K + +R + RE + E+
Sbjct: 7 ENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 132 ILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVA 191
IL ++ P ++TL + IL+ E + L + L +L + + F + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF--LKQIL 124
Query: 192 KALEFLHFGCDPPVIHGDIKPSNV-LLDSDC---RGKVSDFGLS-RIKVEGEF 239
+ +LH + H D+KP N+ LLD + R K+ DFGL+ +I EF
Sbjct: 125 NGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHL 634
GT +VAPE L +AD++S+GV+ +++SG P L + AN+ +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF--LGDTKQETLANVSA----- 231
Query: 635 AQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTPELRPDIGETVR 683
V+ +D+Y ++L + L K P+ R I ++++
Sbjct: 232 ---------VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 86/210 (40%), Gaps = 52/210 (24%)
Query: 90 VIGKGGSGTVFLGIARDGKLLAIKR---------LDTFSLQTEREFQNELQILGGLRSPF 140
++G G SGTV + G+ +A+KR L L TE + P
Sbjct: 22 ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD-----------DHPN 70
Query: 141 LVTLLGYCMERNKRILVYEY-MPNKSLQEML----FSDGNLVL-KWSQRFEIIMDVAKAL 194
++ YC E R L + N +LQ+++ SD NL L K ++ +A +
Sbjct: 71 VIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 128
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGK-------------VSDFGLSRIKVEGEFGM 241
LH +IH D+KP N+L+ + R +SDFGL + K++ G
Sbjct: 129 AHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK-KLDS--GQ 182
Query: 242 DLFSQDLGKSQEL--WKSQEL---SGNLAT 266
F +L W++ EL S NL T
Sbjct: 183 XXFRXNLNNPSGTSGWRAPELLEESNNLQT 212
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 17/173 (9%)
Query: 79 KNATNDFDEANVIGKGGSGTV------FLGIARDGKLLAIKRLDTFSLQTERE-FQNELQ 131
+N + +D +G G V G+ K + +R + RE + E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 132 ILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVA 191
IL ++ P ++TL + IL+ E + L + L +L + + F + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF--LKQIL 124
Query: 192 KALEFLHFGCDPPVIHGDIKPSNV-LLDSDC---RGKVSDFGLS-RIKVEGEF 239
+ +LH + H D+KP N+ LLD + R K+ DFGL+ +I EF
Sbjct: 125 NGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHL 634
GT +VAPE L +AD++S+GV+ +++SG P L + AN+ +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF--LGDTKQETLANVSA----- 231
Query: 635 AQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTPELRPDIGETVR 683
V+ +D+Y ++L + L K P+ R I ++++
Sbjct: 232 ---------VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 81/166 (48%), Gaps = 24/166 (14%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRL------DTFSLQTEREFQNELQILG 134
+ +++ IG+G G VF R G+ +A+K++ + F + RE ++IL
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALRE----IKILQ 72
Query: 135 GLRSPFLVTLLGYCMER--------NKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEI 186
L+ +V L+ C + LV+++ + L +L N+++K++ EI
Sbjct: 73 LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLL---SNVLVKFTLS-EI 127
Query: 187 IMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ L L++ ++H D+K +NVL+ D K++DFGL+R
Sbjct: 128 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 17/173 (9%)
Query: 79 KNATNDFDEANVIGKGGSGTV------FLGIARDGKLLAIKRLDTFSLQTERE-FQNELQ 131
+N + +D +G G V G+ K + +R + RE + E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 132 ILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVA 191
IL ++ P ++TL + IL+ E + L + L +L + + F + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF--LKQIL 124
Query: 192 KALEFLHFGCDPPVIHGDIKPSNV-LLDSDC---RGKVSDFGLS-RIKVEGEF 239
+ +LH + H D+KP N+ LLD + R K+ DFGL+ +I EF
Sbjct: 125 NGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHL 634
GT +VAPE L +AD++S+GV+ +++SG P L + AN+ +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF--LGDTKQETLANVSA----- 231
Query: 635 AQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTPELRPDIGETVR 683
V+ +D+Y ++L + L K P+ R I ++++
Sbjct: 232 ---------VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 17/173 (9%)
Query: 79 KNATNDFDEANVIGKGGSGTV------FLGIARDGKLLAIKRLDTFSLQTERE-FQNELQ 131
+N + +D +G G V G+ K + +R + RE + E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 132 ILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVA 191
IL ++ P ++TL + IL+ E + L + L +L + + F + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEF--LKQIL 124
Query: 192 KALEFLHFGCDPPVIHGDIKPSNV-LLDSDC---RGKVSDFGLS-RIKVEGEF 239
+ +LH + H D+KP N+ LLD + R K+ DFGL+ +I EF
Sbjct: 125 NGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHL 634
GT +VAPE L +AD++S+GV+ +++SG P L + AN+ +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF--LGDTKQETLANVSA----- 231
Query: 635 AQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTPELRPDIGETVR 683
V+ +D+Y ++L + L K P+ R I ++++
Sbjct: 232 ---------VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 17/173 (9%)
Query: 79 KNATNDFDEANVIGKGGSGTV------FLGIARDGKLLAIKRLDTFSLQTERE-FQNELQ 131
+N + +D +G G V G+ K + +R + RE + E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 132 ILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVA 191
IL ++ P ++TL + IL+ E + L + L +L + + F + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF--LKQIL 124
Query: 192 KALEFLHFGCDPPVIHGDIKPSNV-LLDSDC---RGKVSDFGLS-RIKVEGEF 239
+ +LH + H D+KP N+ LLD + R K+ DFGL+ +I EF
Sbjct: 125 NGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHL 634
GT +VAPE L +AD++S+GV+ +++SG P L + AN+ +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF--LGDTKQETLANVSA----- 231
Query: 635 AQAGNILELVDERLKDDYNKEQASLCINLALTCLQKTPELRPDIGETVR 683
V+ +D+Y ++L + L K P+ R I ++++
Sbjct: 232 ---------VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 86/210 (40%), Gaps = 52/210 (24%)
Query: 90 VIGKGGSGTVFLGIARDGKLLAIKR---------LDTFSLQTEREFQNELQILGGLRSPF 140
++G G SGTV + G+ +A+KR L L TE + P
Sbjct: 22 ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD-----------DHPN 70
Query: 141 LVTLLGYCMERNKRILVYEY-MPNKSLQEML----FSDGNLVL-KWSQRFEIIMDVAKAL 194
++ YC E R L + N +LQ+++ SD NL L K ++ +A +
Sbjct: 71 VIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 128
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGK-------------VSDFGLSRIKVEGEFGM 241
LH +IH D+KP N+L+ + R +SDFGL + K++ G
Sbjct: 129 AHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK-KLDS--GQ 182
Query: 242 DLFSQDLGKSQEL--WKSQEL---SGNLAT 266
F +L W++ EL S NL T
Sbjct: 183 SSFRTNLNNPSGTSGWRAPELLEESNNLQT 212
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 83/167 (49%), Gaps = 22/167 (13%)
Query: 80 NATNDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTERE-----FQNELQIL 133
+ + +++ IG+G G VF R G+ +A+K++ ++ E+E E++IL
Sbjct: 14 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV---LMENEKEGFPITALREIKIL 70
Query: 134 GGLRSPFLVTLLGYCMER--------NKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFE 185
L+ +V L+ C + LV+++ + L +L N+++K++ E
Sbjct: 71 QLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLL---SNVLVKFTLS-E 125
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
I + L L++ ++H D+K +NVL+ D K++DFGL+R
Sbjct: 126 IKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 37/171 (21%)
Query: 91 IGKGGSGTVFL----GIARD----GKLLAIKRL-------DTFSLQTEREFQNELQILGG 135
+G+G G V + GI +D +A+K L D L +E E ++++G
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM---MKMIGK 99
Query: 136 LRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFS----------DGNLVLKWSQRFE 185
++ ++ LLG C + ++ EY +L+E L + D N V + F+
Sbjct: 100 HKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 186 IIM----DVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++ +A+ +E+L IH D+ NVL+ + +++DFGL+R
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLAR 205
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 75/166 (45%), Gaps = 27/166 (16%)
Query: 91 IGKGGSGTVFL----GIARDGK----LLAIKRLDTFSLQTE-REFQNELQILGGL-RSPF 140
+G+G G V L G+ +D +A+K L + + + + + +E++++ + +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 141 LVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWS--------------QRFEI 186
++ LLG C + ++ EY +L+E L + L++S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 187 IMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
VA+ +E+L IH D+ NVL+ D K++DFGL+R
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 37/171 (21%)
Query: 91 IGKGGSGTVFL----GIARD----GKLLAIKRL-------DTFSLQTEREFQNELQILGG 135
+G+G G V + GI +D +A+K L D L +E E ++++G
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM---MKMIGK 86
Query: 136 LRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFS----------DGNLVLKWSQRFE 185
++ ++ LLG C + ++ EY +L+E L + D N V + F+
Sbjct: 87 HKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 144
Query: 186 IIM----DVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++ +A+ +E+L IH D+ NVL+ + K++DFGL+R
Sbjct: 145 DLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLAR 192
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 37/171 (21%)
Query: 91 IGKGGSGTVFL----GIARD----GKLLAIKRL-------DTFSLQTEREFQNELQILGG 135
+G+G G V + GI +D +A+K L D L +E E ++++G
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM---MKMIGK 145
Query: 136 LRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFS----------DGNLVLKWSQRFE 185
++ ++ LLG C + ++ EY +L+E L + D N V + F+
Sbjct: 146 HKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 203
Query: 186 IIM----DVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++ +A+ +E+L IH D+ NVL+ + K++DFGL+R
Sbjct: 204 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 251
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 83/167 (49%), Gaps = 22/167 (13%)
Query: 80 NATNDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTERE-----FQNELQIL 133
+ + +++ IG+G G VF R G+ +A+K++ ++ E+E E++IL
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV---LMENEKEGFPITALREIKIL 71
Query: 134 GGLRSPFLVTLLGYCMER--------NKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFE 185
L+ +V L+ C + LV+++ + L +L N+++K++ E
Sbjct: 72 QLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLL---SNVLVKFTLS-E 126
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
I + L L++ ++H D+K +NVL+ D K++DFGL+R
Sbjct: 127 IKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 82/165 (49%), Gaps = 22/165 (13%)
Query: 82 TNDFDEANVIGKGGSGTVFLGIARD-GKLLAIKRLDTFSLQTERE-----FQNELQILGG 135
+ +++ IG+G G VF R G+ +A+K++ ++ E+E E++IL
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV---LMENEKEGFPITALREIKILQL 73
Query: 136 LRSPFLVTLLGYCMERNKRI--------LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEII 187
L+ +V L+ C + LV+++ + L +L N+++K++ EI
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLL---SNVLVKFTLS-EIK 128
Query: 188 MDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ L L++ ++H D+K +NVL+ D K++DFGL+R
Sbjct: 129 RVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 37/171 (21%)
Query: 91 IGKGGSGTVFL----GIARD----GKLLAIKRL-------DTFSLQTEREFQNELQILGG 135
+G+G G V + GI +D +A+K L D L +E E ++++G
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM---MKMIGK 88
Query: 136 LRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFS----------DGNLVLKWSQRFE 185
++ ++ LLG C + ++ EY +L+E L + D N V + F+
Sbjct: 89 HKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 146
Query: 186 IIM----DVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++ +A+ +E+L IH D+ NVL+ + K++DFGL+R
Sbjct: 147 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 194
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 37/171 (21%)
Query: 91 IGKGGSGTVFL----GIARD----GKLLAIKRL-------DTFSLQTEREFQNELQILGG 135
+G+G G V + GI +D +A+K L D L +E E ++++G
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM---MKMIGK 91
Query: 136 LRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFS----------DGNLVLKWSQRFE 185
++ ++ LLG C + ++ EY +L+E L + D N V + F+
Sbjct: 92 HKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 149
Query: 186 IIM----DVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++ +A+ +E+L IH D+ NVL+ + K++DFGL+R
Sbjct: 150 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 197
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQN------ 128
KE + + + ++G GG G+V+ GI D +AIK ++ + E N
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 129 ELQILGGLRSPF--LVTLLGYCMERNKRILVYEYM-PNKSLQEMLFSDGNLVLKWSQRFE 185
E+ +L + S F ++ LL + + +L+ E P + L + + G L + ++ F
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF- 134
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG--KVSDFG 229
V +A+ H C V+H DIK N+L+D + RG K+ DFG
Sbjct: 135 -FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLN-RGELKLIDFG 175
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQN------ 128
KE + + + ++G GG G+V+ GI D +AIK ++ + E N
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 129 ELQILGGLRSPF--LVTLLGYCMERNKRILVYEYM-PNKSLQEMLFSDGNLVLKWSQRFE 185
E+ +L + S F ++ LL + + +L+ E P + L + + G L + ++ F
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF- 134
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG--KVSDFG 229
V +A+ H C V+H DIK N+L+D + RG K+ DFG
Sbjct: 135 -FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLN-RGELKLIDFG 175
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQN------ 128
KE + + + ++G GG G+V+ GI D +AIK ++ + E N
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 129 ELQILGGLRSPF--LVTLLGYCMERNKRILVYEYM-PNKSLQEMLFSDGNLVLKWSQRFE 185
E+ +L + S F ++ LL + + +L+ E P + L + + G L + ++ F
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF- 135
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG--KVSDFG 229
V +A+ H C V+H DIK N+L+D + RG K+ DFG
Sbjct: 136 -FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLN-RGELKLIDFG 176
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 27/166 (16%)
Query: 91 IGKGGSGTVFL----GIARDG----KLLAIKRLDTFSLQTE-REFQNELQILGGL-RSPF 140
+G+G G V L G+ +D +A+K L + + + + + +E++++ + +
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 141 LVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQR--------------FEI 186
++ LLG C + ++ EY +L+E L + L++
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 187 IMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
VA+ +E+L IH D+ NVL+ D K++DFGL+R
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 183
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 10/173 (5%)
Query: 91 IGKGGSGTVFLGIARDGKL-LAIKRLDTFSLQTERE-FQNELQILGGLRSPFLVTLLGYC 148
+G G G V L R L IK ++ Q E + E+++L L P ++ +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 149 MERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRF--EIIMDVAKALEFLHFGCDPPVI 206
+ + +V E L E + S S+ + E++ + AL + H V+
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVV 146
Query: 207 HGDIKPSNVLLDSDCRG---KVSDFGLSRIKVEGEFGMDLFSQDLGKSQELWK 256
H D+KP N+L K+ DFGL+ + E + L + E++K
Sbjct: 147 HKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFK 199
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQN------ 128
KE + + + ++G GG G+V+ GI D +AIK ++ + E N
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 129 ELQILGGLRSPF--LVTLLGYCMERNKRILVYEYM-PNKSLQEMLFSDGNLVLKWSQRFE 185
E+ +L + S F ++ LL + + +L+ E P + L + + G L + ++ F
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF- 120
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG--KVSDFG 229
V +A+ H C V+H DIK N+L+D + RG K+ DFG
Sbjct: 121 -FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLN-RGELKLIDFG 161
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQN------ 128
KE + + + ++G GG G+V+ GI D +AIK ++ + E N
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 129 ELQILGGLRSPF--LVTLLGYCMERNKRILVYEYM-PNKSLQEMLFSDGNLVLKWSQRFE 185
E+ +L + S F ++ LL + + +L+ E P + L + + G L + ++ F
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF- 119
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG--KVSDFG 229
V +A+ H C V+H DIK N+L+D + RG K+ DFG
Sbjct: 120 -FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLN-RGELKLIDFG 160
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQN------ 128
KE + + + ++G GG G+V+ GI D +AIK ++ + E N
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 129 ELQILGGLRSPF--LVTLLGYCMERNKRILVYEYM-PNKSLQEMLFSDGNLVLKWSQRFE 185
E+ +L + S F ++ LL + + +L+ E P + L + + G L + ++ F
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF- 135
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG--KVSDFG 229
V +A+ H C V+H DIK N+L+D + RG K+ DFG
Sbjct: 136 -FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLN-RGELKLIDFG 176
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQN------ 128
KE + + + ++G GG G+V+ GI D +AIK ++ + E N
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 129 ELQILGGLRSPF--LVTLLGYCMERNKRILVYEYM-PNKSLQEMLFSDGNLVLKWSQRFE 185
E+ +L + S F ++ LL + + +L+ E P + L + + G L + ++ F
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF- 120
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG--KVSDFG 229
V +A+ H C V+H DIK N+L+D + RG K+ DFG
Sbjct: 121 -FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLN-RGELKLIDFG 161
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQN------ 128
KE + + + ++G GG G+V+ GI D +AIK ++ + E N
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 129 ELQILGGLRSPF--LVTLLGYCMERNKRILVYEYM-PNKSLQEMLFSDGNLVLKWSQRFE 185
E+ +L + S F ++ LL + + +L+ E P + L + + G L + ++ F
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF- 147
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG--KVSDFG 229
V +A+ H C V+H DIK N+L+D + RG K+ DFG
Sbjct: 148 -FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLN-RGELKLIDFG 188
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQN------ 128
KE + + + ++G GG G+V+ GI D +AIK ++ + E N
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 129 ELQILGGLRSPF--LVTLLGYCMERNKRILVYEYM-PNKSLQEMLFSDGNLVLKWSQRFE 185
E+ +L + S F ++ LL + + +L+ E P + L + + G L + ++ F
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF- 120
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG--KVSDFG 229
V +A+ H C V+H DIK N+L+D + RG K+ DFG
Sbjct: 121 -FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLN-RGELKLIDFG 161
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQN------ 128
KE + + + ++G GG G+V+ GI D +AIK ++ + E N
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 129 ELQILGGLRSPF--LVTLLGYCMERNKRILVYEYM-PNKSLQEMLFSDGNLVLKWSQRFE 185
E+ +L + S F ++ LL + + +L+ E P + L + + G L + ++ F
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF- 147
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG--KVSDFG 229
V +A+ H C V+H DIK N+L+D + RG K+ DFG
Sbjct: 148 -FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLN-RGELKLIDFG 188
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQN------ 128
KE + + + ++G GG G+V+ GI D +AIK ++ + E N
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 129 ELQILGGLRSPF--LVTLLGYCMERNKRILVYEYM-PNKSLQEMLFSDGNLVLKWSQRFE 185
E+ +L + S F ++ LL + + +L+ E P + L + + G L + ++ F
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF- 135
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG--KVSDFG 229
V +A+ H C V+H DIK N+L+D + RG K+ DFG
Sbjct: 136 -FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLN-RGELKLIDFG 176
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQN------ 128
KE + + + ++G GG G+V+ GI D +AIK ++ + E N
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 129 ELQILGGLRSPF--LVTLLGYCMERNKRILVYEYM-PNKSLQEMLFSDGNLVLKWSQRFE 185
E+ +L + S F ++ LL + + +L+ E P + L + + G L + ++ F
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF- 148
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG--KVSDFG 229
V +A+ H C V+H DIK N+L+D + RG K+ DFG
Sbjct: 149 -FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLN-RGELKLIDFG 189
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQN------ 128
KE + + + ++G GG G+V+ GI D +AIK ++ + E N
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 129 ELQILGGLRSPF--LVTLLGYCMERNKRILVYEYM-PNKSLQEMLFSDGNLVLKWSQRFE 185
E+ +L + S F ++ LL + + +L+ E P + L + + G L + ++ F
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF- 147
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG--KVSDFG 229
V +A+ H C V+H DIK N+L+D + RG K+ DFG
Sbjct: 148 -FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLN-RGELKLIDFG 188
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQN------ 128
KE + + + ++G GG G+V+ GI D +AIK ++ + E N
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 129 ELQILGGLRSPF--LVTLLGYCMERNKRILVYEYM-PNKSLQEMLFSDGNLVLKWSQRFE 185
E+ +L + S F ++ LL + + +L+ E P + L + + G L + ++ F
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF- 148
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG--KVSDFG 229
V +A+ H C V+H DIK N+L+D + RG K+ DFG
Sbjct: 149 -FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLN-RGELKLIDFG 189
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQN------ 128
KE + + + ++G GG G+V+ GI D +AIK ++ + E N
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 129 ELQILGGLRSPF--LVTLLGYCMERNKRILVYEYM-PNKSLQEMLFSDGNLVLKWSQRFE 185
E+ +L + S F ++ LL + + +L+ E P + L + + G L + ++ F
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF- 147
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG--KVSDFG 229
V +A+ H C V+H DIK N+L+D + RG K+ DFG
Sbjct: 148 -FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLN-RGELKLIDFG 188
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 44/171 (25%)
Query: 90 VIGKGGSGTVFLGIARDGKLLAIKR---------LDTFSLQTEREFQNELQILGGLRSPF 140
++G G SGTV + G+ +A+KR L L TE + P
Sbjct: 40 ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD-----------DHPN 88
Query: 141 LVTLLGYCMERNKRILVYEY-MPNKSLQEML----FSDGNLVL-KWSQRFEIIMDVAKAL 194
++ YC E R L + N +LQ+++ SD NL L K ++ +A +
Sbjct: 89 VIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 146
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGK-------------VSDFGLSR 232
LH +IH D+KP N+L+ + R +SDFGL +
Sbjct: 147 AHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQN------ 128
KE + + + ++G GG G+V+ GI D +AIK ++ + E N
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 129 ELQILGGLRSPF--LVTLLGYCMERNKRILVYEYM-PNKSLQEMLFSDGNLVLKWSQRFE 185
E+ +L + S F ++ LL + + +L+ E P + L + + G L + ++ F
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF- 148
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG--KVSDFG 229
V +A+ H C V+H DIK N+L+D + RG K+ DFG
Sbjct: 149 -FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLN-RGELKLIDFG 189
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQN------ 128
KE + + + ++G GG G+V+ GI D +AIK ++ + E N
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 129 ELQILGGLRSPF--LVTLLGYCMERNKRILVYEYM-PNKSLQEMLFSDGNLVLKWSQRFE 185
E+ +L + S F ++ LL + + +L+ E P + L + + G L + ++ F
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF- 148
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG--KVSDFG 229
V +A+ H C V+H DIK N+L+D + RG K+ DFG
Sbjct: 149 -FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLN-RGELKLIDFG 189
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQN------ 128
KE + + + ++G GG G+V+ GI D +AIK ++ + E N
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 129 ELQILGGLRSPF--LVTLLGYCMERNKRILVYEYM-PNKSLQEMLFSDGNLVLKWSQRFE 185
E+ +L + S F ++ LL + + +L+ E P + L + + G L + ++ F
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF- 162
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG--KVSDFG 229
V +A+ H C V+H DIK N+L+D + RG K+ DFG
Sbjct: 163 -FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLN-RGELKLIDFG 203
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 27/166 (16%)
Query: 91 IGKGGSGTVFL----GIARDG----KLLAIKRLDTFSLQTE-REFQNELQILGGL-RSPF 140
+G+G G V L G+ +D +A+K L + + + + + +E++++ + +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 141 LVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQR--------------FEI 186
++ LLG C + ++ EY +L+E L + L++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 187 IMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
VA+ +E+L IH D+ NVL+ D K++DFGL+R
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 44/171 (25%)
Query: 90 VIGKGGSGTVFLGIARDGKLLAIKR---------LDTFSLQTEREFQNELQILGGLRSPF 140
++G G SGTV + G+ +A+KR L L TE + P
Sbjct: 40 ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD-----------DHPN 88
Query: 141 LVTLLGYCMERNKRILVYEY-MPNKSLQEML----FSDGNLVL-KWSQRFEIIMDVAKAL 194
++ YC E R L + N +LQ+++ SD NL L K ++ +A +
Sbjct: 89 VIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 146
Query: 195 EFLHFGCDPPVIHGDIKPSNVLLDSDCRGK-------------VSDFGLSR 232
LH +IH D+KP N+L+ + R +SDFGL +
Sbjct: 147 AHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQN------ 128
KE + + + ++G GG G+V+ GI D +AIK ++ + E N
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 129 ELQILGGLRSPF--LVTLLGYCMERNKRILVYEYM-PNKSLQEMLFSDGNLVLKWSQRFE 185
E+ +L + S F ++ LL + + +L+ E P + L + + G L + ++ F
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF- 162
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG--KVSDFG 229
V +A+ H C V+H DIK N+L+D + RG K+ DFG
Sbjct: 163 -FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLN-RGELKLIDFG 203
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQN------ 128
KE + + + ++G GG G+V+ GI D +AIK ++ + E N
Sbjct: 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 95
Query: 129 ELQILGGLRSPF--LVTLLGYCMERNKRILVYEYM-PNKSLQEMLFSDGNLVLKWSQRFE 185
E+ +L + S F ++ LL + + +L+ E P + L + + G L + ++ F
Sbjct: 96 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF- 154
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG--KVSDFG 229
V +A+ H C V+H DIK N+L+D + RG K+ DFG
Sbjct: 155 -FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLN-RGELKLIDFG 195
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 78/165 (47%), Gaps = 22/165 (13%)
Query: 79 KNATNDFDEA-NVIGKGGSGTVFL----GIARDGKLLAIKRLDTFSLQTEREFQNELQIL 133
++A +DF E + +G+G + V+ G + L +K+ ++ + E+ +L
Sbjct: 48 RDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT-----VDKKIVRTEIGVL 102
Query: 134 GGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQR--FEIIMDVA 191
L P ++ L + LV E + L + + G +S+R + + +
Sbjct: 103 LRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY----YSERDAADAVKQIL 158
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDS---DCRGKVSDFGLSRI 233
+A+ +LH + ++H D+KP N+L + D K++DFGLS+I
Sbjct: 159 EAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKI 200
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQN------ 128
KE + + + ++G GG G+V+ GI D +AIK ++ + E N
Sbjct: 49 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 108
Query: 129 ELQILGGLRSPF--LVTLLGYCMERNKRILVYEYM-PNKSLQEMLFSDGNLVLKWSQRFE 185
E+ +L + S F ++ LL + + +L+ E P + L + + G L + ++ F
Sbjct: 109 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF- 167
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG--KVSDFG 229
V +A+ H C V+H DIK N+L+D + RG K+ DFG
Sbjct: 168 -FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLN-RGELKLIDFG 208
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 69/172 (40%), Gaps = 21/172 (12%)
Query: 77 ELKNATNDFDEANVIGKGGSGTVFLGIARDGKLLAIKRL-------DTFSLQTE----RE 125
EL + + I G G V G+ +G +AIKR+ T ++ ++ +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 126 FQNELQILGGLRSPFLVTLLGYCME-----RNKRILVYEYMPNKSLQEMLFSDGNLVLKW 180
E+++L P ++ L + +K LV E M Q + D +V+
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQ--VIHDQRIVISP 133
Query: 181 SQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ + L LH + V+H D+ P N+LL + + DF L+R
Sbjct: 134 QHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAR 182
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 76/160 (47%), Gaps = 14/160 (8%)
Query: 83 NDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQNELQILGGLRSPFL 141
+D+ +G+G VF I + + +A+K L + + L+ L G P +
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIKILENLRG--GPNI 94
Query: 142 VTLLGYCMERNKRI--LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHF 199
+TL + R LV+E++ N +++ + + RF + ++ KAL++ H
Sbjct: 95 ITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRF-YMYEILKALDYCH- 148
Query: 200 GCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGE 238
++H D+KP NVL+D + R ++ D+GL+ G+
Sbjct: 149 --SMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQ 186
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 69/172 (40%), Gaps = 21/172 (12%)
Query: 77 ELKNATNDFDEANVIGKGGSGTVFLGIARDGKLLAIKRL-------DTFSLQTE----RE 125
EL + + I G G V G+ +G +AIKR+ T ++ ++ +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 126 FQNELQILGGLRSPFLVTLLGYCME-----RNKRILVYEYMPNKSLQEMLFSDGNLVLKW 180
E+++L P ++ L + +K LV E M Q + D +V+
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQ--VIHDQRIVISP 133
Query: 181 SQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+ + L LH + V+H D+ P N+LL + + DF L+R
Sbjct: 134 QHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAR 182
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 76 KELKNATNDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQN------ 128
KE + + + ++G GG G+V+ GI D +AIK ++ + E N
Sbjct: 24 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 83
Query: 129 ELQILGGLRSPF--LVTLLGYCMERNKRILVYEYM-PNKSLQEMLFSDGNLVLKWSQRFE 185
E+ +L + S F ++ LL + + +L+ E P + L + + G L + ++ F
Sbjct: 84 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF- 142
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG--KVSDFG 229
V +A+ H C V+H DIK N+L+D + RG K+ DFG
Sbjct: 143 -FWQVLEAVRHCH-NCG--VLHRDIKDENILIDLN-RGELKLIDFG 183
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 37/171 (21%)
Query: 91 IGKGGSGTVFL----GIARD----GKLLAIKRL-------DTFSLQTEREFQNELQILGG 135
+G+G G V + GI +D +A+K L D L +E E ++++G
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM---MKMIGK 99
Query: 136 LRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFS----------DGNLVLKWSQRFE 185
++ ++ LLG C + ++ Y +L+E L + D N V + F+
Sbjct: 100 HKN--IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 186 IIM----DVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++ +A+ +E+L IH D+ NVL+ + K++DFGL+R
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 32/162 (19%)
Query: 89 NVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQTEREFQNELQILGGL----------R 137
++IGKG G V R + + +AIK ++ ++ F N+ QI L
Sbjct: 60 SLIGKGSFGQVVKAYDRVEQEWVAIK-----IIKNKKAFLNQAQIEVRLLELMNKHDTEM 114
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDG------NLVLKWSQRFEIIMDVA 191
++V L + M RN LV+E M + +L ++L + NL K++Q+ +
Sbjct: 115 KYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTNFRGVSLNLTRKFAQQ------MC 167
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG--KVSDFGLS 231
AL FL + +IH D+KP N+LL + R K+ DFG S
Sbjct: 168 TALLFLA-TPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 35.8 bits (81), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 32/162 (19%)
Query: 89 NVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQTEREFQNELQILGGL----------R 137
++IGKG G V R + + +AIK ++ ++ F N+ QI L
Sbjct: 41 SLIGKGSFGQVVKAYDRVEQEWVAIK-----IIKNKKAFLNQAQIEVRLLELMNKHDTEM 95
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDG------NLVLKWSQRFEIIMDVA 191
++V L + M RN LV+E M + +L ++L + NL K++Q+ +
Sbjct: 96 KYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTNFRGVSLNLTRKFAQQ------MC 148
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG--KVSDFGLS 231
AL FL + +IH D+KP N+LL + R K+ DFG S
Sbjct: 149 TALLFLA-TPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 189
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 32/162 (19%)
Query: 89 NVIGKGGSGTVFLGIAR-DGKLLAIKRLDTFSLQTEREFQNELQILGGL----------R 137
++IGKG G V R + + +AIK ++ ++ F N+ QI L
Sbjct: 60 SLIGKGSFGQVVKAYDRVEQEWVAIK-----IIKNKKAFLNQAQIEVRLLELMNKHDTEM 114
Query: 138 SPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDG------NLVLKWSQRFEIIMDVA 191
++V L + M RN LV+E M + +L ++L + NL K++Q+ +
Sbjct: 115 KYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTNFRGVSLNLTRKFAQQ------MC 167
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG--KVSDFGLS 231
AL FL + +IH D+KP N+LL + R K+ DFG S
Sbjct: 168 TALLFLA-TPELSIIHCDLKPENILLCNPKRXAIKIVDFGSS 208
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 139 PFLVTLLGYCMERNKRI--LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEF 196
P ++TL + R LV+E++ N +++ + + RF + ++ KAL++
Sbjct: 97 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRF-YMYEILKALDY 151
Query: 197 LHFGCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGE 238
H ++H D+KP NV++D + R ++ D+GL+ G+
Sbjct: 152 CH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 191
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 37/171 (21%)
Query: 91 IGKGGSGTVFL----GIARD----GKLLAIKRL-------DTFSLQTEREFQNELQILGG 135
+G+G G V + GI +D +A+K L D L +E E ++++G
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEM---MKMIGK 99
Query: 136 LRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFS----------DGNLVLKWSQRFE 185
++ ++ LLG C + ++ Y +L+E L + D N V + F+
Sbjct: 100 HKN--IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 186 IIM----DVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
++ +A+ +E+L IH D+ NVL+ + K++DFGL+R
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 156 LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNV 215
LV+E++ N +++ + + RF + ++ KAL++ H ++H D+KP NV
Sbjct: 111 LVFEHVNNTDFKQLY----QTLTDYDIRF-YMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 216 LLDSDCRG-KVSDFGLSRIKVEGE 238
++D + R ++ D+GL+ G+
Sbjct: 163 MIDHEHRKLRLIDWGLAEFYHPGQ 186
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 156 LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNV 215
LV+E++ N +++ + + RF + ++ KAL++ H ++H D+KP NV
Sbjct: 110 LVFEHVNNTDFKQLY----QTLTDYDIRF-YMYEILKALDYCH---SMGIMHRDVKPHNV 161
Query: 216 LLDSDCRG-KVSDFGLSRIKVEGE 238
++D + R ++ D+GL+ G+
Sbjct: 162 MIDHEHRKLRLIDWGLAEFYHPGQ 185
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 156 LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNV 215
LV+E++ N +++ + + RF + ++ KAL++ H ++H D+KP NV
Sbjct: 111 LVFEHVNNTDFKQLY----QTLTDYDIRF-YMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 216 LLDSDCRG-KVSDFGLSRIKVEGE 238
++D + R ++ D+GL+ G+
Sbjct: 163 MIDHEHRKLRLIDWGLAEFYHPGQ 186
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 139 PFLVTLLGYCMERNKRI--LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEF 196
P ++TL + R LV+E++ N +++ + + RF + ++ KAL++
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRF-YMYEILKALDY 146
Query: 197 LHFGCDPPVIHGDIKPSNVLLDSDCRG-KVSDFGLSRIKVEGE 238
H ++H D+KP NV++D + R ++ D+GL+ G+
Sbjct: 147 CH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 186
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 156 LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNV 215
LV+E++ N +++ + + RF + ++ KAL++ H ++H D+KP NV
Sbjct: 110 LVFEHVNNTDFKQLY----QTLTDYDIRF-YMYEILKALDYCH---SMGIMHRDVKPHNV 161
Query: 216 LLDSDCRG-KVSDFGLSRIKVEGE 238
++D + R ++ D+GL+ G+
Sbjct: 162 MIDHEHRKLRLIDWGLAEFYHPGQ 185
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 156 LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNV 215
LV+E++ N +++ + + RF + ++ KAL++ H ++H D+KP NV
Sbjct: 111 LVFEHVNNTDFKQLY----QTLTDYDIRF-YMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 216 LLDSDCRG-KVSDFGLSRIKVEGE 238
++D + R ++ D+GL+ G+
Sbjct: 163 MIDHEHRKLRLIDWGLAEFYHPGQ 186
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 156 LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNV 215
LV+E++ N +++ + + RF + ++ KAL++ H ++H D+KP NV
Sbjct: 111 LVFEHVNNTDFKQLY----QTLTDYDIRF-YMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 216 LLDSDCRG-KVSDFGLSRIKVEGE 238
++D + R ++ D+GL+ G+
Sbjct: 163 MIDHEHRKLRLIDWGLAEFYHPGQ 186
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 156 LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNV 215
LV+E++ N +++ + + RF + ++ KAL++ H ++H D+KP NV
Sbjct: 111 LVFEHVNNTDFKQLY----QTLTDYDIRF-YMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 216 LLDSDCRG-KVSDFGLSRIKVEGE 238
++D + R ++ D+GL+ G+
Sbjct: 163 MIDHEHRKLRLIDWGLAEFYHPGQ 186
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 156 LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNV 215
LV+E++ N +++ + + RF + ++ KAL++ H ++H D+KP NV
Sbjct: 111 LVFEHVNNTDFKQLY----QTLTDYDIRF-YMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 216 LLDSDCRG-KVSDFGLSRIKVEGE 238
++D + R ++ D+GL+ G+
Sbjct: 163 MIDHEHRKLRLIDWGLAEFYHPGQ 186
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 156 LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNV 215
LV+E++ N +++ + + RF + ++ KAL++ H ++H D+KP NV
Sbjct: 111 LVFEHVNNTDFKQLY----QTLTDYDIRF-YMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 216 LLDSDCRG-KVSDFGLSRIKVEGE 238
++D + R ++ D+GL+ G+
Sbjct: 163 MIDHEHRKLRLIDWGLAEFYHPGQ 186
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 156 LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNV 215
LV+E++ N +++ + + RF + ++ KAL++ H ++H D+KP NV
Sbjct: 109 LVFEHVNNTDFKQLY----QTLTDYDIRF-YMYEILKALDYCH---SMGIMHRDVKPHNV 160
Query: 216 LLDSDCRG-KVSDFGLSRIKVEGE 238
++D + R ++ D+GL+ G+
Sbjct: 161 MIDHEHRKLRLIDWGLAEFYHPGQ 184
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 79 KNATNDFDEANVIGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGG--L 136
+ D +GKG G V+ G + G+ +A+K FS + E+ + E ++ L
Sbjct: 4 RTVARDITLLECVGKGRYGEVWRG-SWQGENVAVK---IFSSRDEKSWFRETELYNTVML 59
Query: 137 RSPFLVTLLGYCM----ERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
R ++ + M + L+ Y SL + L L I++ +A
Sbjct: 60 RHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIAS 116
Query: 193 ALEFLH---FGCD--PPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEFGMDL 243
L LH FG P + H D+K N+L+ + + ++D GL+ + + +D+
Sbjct: 117 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDV 172
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 185 EIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLL 217
+II V + L++LH C +IH DIKP N+LL
Sbjct: 150 KIIQQVLQGLDYLHTKCR--IIHTDIKPENILL 180
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 86/203 (42%), Gaps = 25/203 (12%)
Query: 52 NLVNRSRTIPFDSNAPLKLQRFTYKELKNATNDFDEANVIGKGGSGTVFLGIARDGKLLA 111
+L++ S T S P +QR +++ +GKG G V+ G + G+ +A
Sbjct: 13 DLLDHSCTSGSGSGLPFLVQRTVARQIT-------LLECVGKGRYGEVWRG-SWQGENVA 64
Query: 112 IKRLDTFSLQTEREFQNELQILGG--LRSPFLVTLLGYCM----ERNKRILVYEYMPNKS 165
+K FS + E+ + E ++ LR ++ + M + L+ Y S
Sbjct: 65 VK---IFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGS 121
Query: 166 LQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH---FGCD--PPVIHGDIKPSNVLLDSD 220
L + L L I++ +A L LH FG P + H D+K N+L+ +
Sbjct: 122 LYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN 178
Query: 221 CRGKVSDFGLSRIKVEGEFGMDL 243
+ ++D GL+ + + +D+
Sbjct: 179 GQCCIADLGLAVMHSQSTNQLDV 201
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 185 EIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLL 217
+II V + L++LH C +IH DIKP N+LL
Sbjct: 134 KIIQQVLQGLDYLHTKCR--IIHTDIKPENILL 164
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 18/152 (11%)
Query: 90 VIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQN------ELQILGGLRSPF-- 140
++G GG G+V+ GI D +AIK ++ + E N E+ +L + S F
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 141 LVTLLGYCMERNKRILVYEYM-PNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHF 199
++ LL + + +L+ E P + L + + G L + ++ F V +A+ H
Sbjct: 74 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF--FWQVLEAVRHCH- 130
Query: 200 GCDPPVIHGDIKPSNVLLDSDCRG--KVSDFG 229
C V+H DIK N+L+D + RG K+ DFG
Sbjct: 131 NCG--VLHRDIKDENILIDLN-RGELKLIDFG 159
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 156 LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNV 215
LV+E++ N +++ + + RF + ++ KAL++ H ++H D+KP NV
Sbjct: 111 LVFEHVNNTDFKQL----RQTLTDYDIRF-YMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 216 LLDSDCRG-KVSDFGLSRIKVEGE 238
++D + R ++ D+GL+ G+
Sbjct: 163 MIDHEHRKLRLIDWGLAEFYHPGQ 186
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 9/111 (8%)
Query: 125 EFQNELQILGGLRSPFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRF 184
E + E+ IL + P ++TL R +L+ E + L + L +L + + F
Sbjct: 61 EIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 185 EIIMDVAKALEFLHFGCDPPVIHGDIKPSNV-LLDSDC---RGKVSDFGLS 231
I + + +LH + H D+KP N+ LLD + K+ DFGL+
Sbjct: 121 --IKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 575 GTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
GT +VAPE L +AD++S+GV+ +++SG P
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 83 NDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQN------ELQILGG 135
+ + ++G GG G+V+ GI D +AIK ++ + E N E+ +L
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 136 LRSPF--LVTLLGYCMERNKRILVYEYM-PNKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
+ S F ++ LL + + +L+ E P + L + + G L + ++ F V +
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF--FWQVLE 121
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG--KVSDFG 229
A+ H C V+H DIK N+L+D + RG K+ DFG
Sbjct: 122 AVRHCH-NCG--VLHRDIKDENILIDLN-RGELKLIDFG 156
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 83 NDFDEANVIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQN------ELQILGG 135
+ + ++G GG G+V+ GI D +AIK ++ + E N E+ +L
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 136 LRSPF--LVTLLGYCMERNKRILVYEYM-PNKSLQEMLFSDGNLVLKWSQRFEIIMDVAK 192
+ S F ++ LL + + +L+ E P + L + + G L + ++ F V +
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF--FWQVLE 121
Query: 193 ALEFLHFGCDPPVIHGDIKPSNVLLDSDCRG--KVSDFG 229
A+ H C V+H DIK N+L+D + RG K+ DFG
Sbjct: 122 AVRHCH-NCG--VLHRDIKDENILIDLN-RGELKLIDFG 156
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 7/57 (12%)
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCR---GKVSDFGL-SRIKVEGE 238
++ DVA AL+FLH + + H D+KP N+L + + K+ DF L S IK+ G+
Sbjct: 116 VVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD 169
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 44/77 (57%), Gaps = 9/77 (11%)
Query: 156 LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNV 215
LV+EY+ N +++ ++ + RF + ++ KAL++ H ++H D+KP NV
Sbjct: 112 LVFEYINNTDFKQLY----QILTDFDIRF-YMYELLKALDYCH---SKGIMHRDVKPHNV 163
Query: 216 LLDSDCRG-KVSDFGLS 231
++D + ++ D+GL+
Sbjct: 164 MIDHQQKKLRLIDWGLA 180
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 184 FEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDCRGKVSDFG 229
+I +A++ +H PP+IH D+K N+LL + K+ DFG
Sbjct: 139 LKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFG 183
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 44/77 (57%), Gaps = 9/77 (11%)
Query: 156 LVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNV 215
LV+EY+ N +++ ++ + RF + ++ KAL++ H ++H D+KP NV
Sbjct: 117 LVFEYINNTDFKQLY----QILTDFDIRF-YMYELLKALDYCH---SKGIMHRDVKPHNV 168
Query: 216 LLDSDCRG-KVSDFGLS 231
++D + ++ D+GL+
Sbjct: 169 MIDHQQKKLRLIDWGLA 185
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 18/152 (11%)
Query: 90 VIGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTEREFQN------ELQILGGLRSPF-- 140
++G GG G+V+ GI D +AIK ++ + E N E+ +L + S F
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 141 LVTLLGYCMERNKRILVYEYM-PNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHF 199
++ LL + + +L+ E P + L + + G L + ++ F V +A+ H
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF--FWQVLEAVRHCH- 127
Query: 200 GCDPPVIHGDIKPSNVLLDSDCRG--KVSDFG 229
+ V+H DIK N+L+D + RG K+ DFG
Sbjct: 128 --NXGVLHRDIKDENILIDLN-RGELKLIDFG 156
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 24/155 (15%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGG--LRSPFLVTLLGYC 148
IGKG G V+ G R G+ +A+K FS + ER + E +I LR +LG+
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHE---NILGFI 64
Query: 149 MERNKR-------ILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGC 201
NK LV +Y + SL + L + ++ + A L LH
Sbjct: 65 AADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEI 121
Query: 202 -----DPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
P + H D+K N+L+ + ++D GL+
Sbjct: 122 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 156
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 30/135 (22%)
Query: 111 AIKRLDTFSLQTEREFQNELQILGGLR---SPFLVTLLGYCMERNKRILVYEYMP----- 162
A+K +D +++R+ E++IL LR P ++TL + LV E M
Sbjct: 56 AVKVID----KSKRDPSEEIEIL--LRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELL 109
Query: 163 NKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLL----- 217
+K L++ FS+ ++ + K +E+LH V+H D+KPSN+L
Sbjct: 110 DKILRQKFFSEREASF-------VLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESG 159
Query: 218 DSDCRGKVSDFGLSR 232
+ +C ++ DFG ++
Sbjct: 160 NPECL-RICDFGFAK 173
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 563 FSRELSSTTSMRGTLCY----VAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
F+++L + + T CY VAPE E DI+SLG+L+ +++G P
Sbjct: 171 FAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 125 EFQNELQILGGLRS-PFLVTLLGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQR 183
E +E+ +L +S P ++ L ++ IL+ EY + + + ++ +
Sbjct: 74 EILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDV 133
Query: 184 FEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSDC---RGKVSDFGLSR 232
+I + + + +LH ++H D+KP N+LL S K+ DFG+SR
Sbjct: 134 IRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR 182
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 20/153 (13%)
Query: 91 IGKGGSGTVFLGI-ARDGKLLAIKRLDTFSLQTERE-----FQNELQILGGLRSPFLVTL 144
+G+G G V+ I + +AIKR+ L+ E E E+ +L L+ ++ L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRI---RLEHEEEGVPGTAIREVSLLKELQHRNIIEL 98
Query: 145 LGYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPP 204
++ L++EY N L++ + + ++ ++ + F + + + F H
Sbjct: 99 KSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSF--LYQLINGVNFCH---SRR 152
Query: 205 VIHGDIKPSNVLLD-SDCRG----KVSDFGLSR 232
+H D+KP N+LL SD K+ DFGL+R
Sbjct: 153 CLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 24/155 (15%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGG--LRSPFLVTLLGYC 148
IGKG G V+ G R G+ +A+K FS + ER + E +I LR +LG+
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHE---NILGFI 63
Query: 149 MERNKR-------ILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGC 201
NK LV +Y + SL + L + ++ + A L LH
Sbjct: 64 AADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEI 120
Query: 202 -----DPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
P + H D+K N+L+ + ++D GL+
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 31/144 (21%)
Query: 111 AIKRLDTFSLQTEREFQNELQILGGLR---SPFLVTLLGYCMERNKRILVYEYMP----- 162
A+K +D +++R+ E++IL LR P ++TL + LV E M
Sbjct: 56 AVKVID----KSKRDPSEEIEIL--LRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELL 109
Query: 163 NKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVIHGDIKPSNVLL----- 217
+K L++ FS+ ++ + K +E+LH V+H D+KPSN+L
Sbjct: 110 DKILRQKFFSEREASF-------VLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESG 159
Query: 218 DSDCRGKVSDFGLSRIKVEGEFGM 241
+ +C ++ DFG ++ ++ E G+
Sbjct: 160 NPECL-RICDFGFAK-QLRAENGL 181
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 563 FSRELSSTTSMRGTLCY----VAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPL 613
F+++L + + T CY VAPE E DI+SLG+L+ +++G P
Sbjct: 171 FAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 18/164 (10%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGG--LRSPFLVTLLGYC 148
+GKG G V+ G + G+ +A+K FS + E+ + E ++ LR ++ +
Sbjct: 16 VGKGRYGEVWRG-SWQGENVAVK---IFSSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 149 M----ERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLH---FGC 201
M + L+ Y SL + L L I++ +A L LH FG
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGT 128
Query: 202 D--PPVIHGDIKPSNVLLDSDCRGKVSDFGLSRIKVEGEFGMDL 243
P + H D+K N+L+ + + ++D GL+ + + +D+
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDV 172
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 72/160 (45%), Gaps = 26/160 (16%)
Query: 85 FDEANVIGKGGSGTVFLGIARDGKLLAIKRL--DTFSLQTEREFQNELQILG-GLRSPFL 141
F +V+G G GT+ D + +A+KR+ + FS E+Q+L P +
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFA-----DREVQLLRESDEHPNV 80
Query: 142 VTLLGYCMERNKRILVYEYMP----NKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFL 197
+ +C E++++ ++Y+ +LQE + + + ++ L L
Sbjct: 81 IRY--FCTEKDRQ---FQYIAIELCAATLQEYV-EQKDFAHLGLEPITLLQQTTSGLAHL 134
Query: 198 HFGCDPPVIHGDIKPSNVLLD-SDCRGK----VSDFGLSR 232
H ++H D+KP N+L+ + GK +SDFGL +
Sbjct: 135 H---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK 171
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 24/155 (15%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGG--LRSPFLVTLLGYC 148
IGKG G V+ G R G+ +A+K FS + ER + E +I LR +LG+
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHE---NILGFI 69
Query: 149 MERNKR-------ILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGC 201
NK LV +Y + SL + L + ++ + A L LH
Sbjct: 70 AADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEI 126
Query: 202 -----DPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
P + H D+K N+L+ + ++D GL+
Sbjct: 127 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 161
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 24/155 (15%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGG--LRSPFLVTLLGYC 148
IGKG G V+ G R G+ +A+K FS + ER + E +I LR +LG+
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHE---NILGFI 66
Query: 149 MERNKR-------ILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGC 201
NK LV +Y + SL + L + ++ + A L LH
Sbjct: 67 AADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEI 123
Query: 202 -----DPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
P + H D+K N+L+ + ++D GL+
Sbjct: 124 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 158
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 24/155 (15%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGG--LRSPFLVTLLGYC 148
IGKG G V+ G R G+ +A+K FS + ER + E +I LR +LG+
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHE---NILGFI 89
Query: 149 MERNKR-------ILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGC 201
NK LV +Y + SL + L + ++ + A L LH
Sbjct: 90 AADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEI 146
Query: 202 -----DPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
P + H D+K N+L+ + ++D GL+
Sbjct: 147 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 181
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 59/147 (40%), Gaps = 10/147 (6%)
Query: 91 IGKGGSGTVFLGI----ARDGKLLAIKRLDTFSLQTERE-FQNELQILGGLRSPFLVTLL 145
IG+G G V GI +AIK + + RE F E + P +V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 146 GYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPV 205
G E N ++ E L+ L L + ++ AL +L
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTALAYLE---SKRF 512
Query: 206 IHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+H DI NVL+ S+ K+ DFGLSR
Sbjct: 513 VHRDIAARNVLVSSNDCVKLGDFGLSR 539
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 186 IIMDVAKALEFLHFGCDPPVIHGDIKPSNVLLDSD 220
II V + L++LH C +IH DIKP N+L+ D
Sbjct: 145 IIRQVLQGLDYLHSKCK--IIHTDIKPENILMCVD 177
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 59/147 (40%), Gaps = 10/147 (6%)
Query: 91 IGKGGSGTVFLGIARD----GKLLAIKRLDTFSLQTERE-FQNELQILGGLRSPFLVTLL 145
IG+G G V GI +AIK + + RE F E + P +V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 146 GYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPV 205
G E N ++ E L+ L L + ++ AL +L
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTALAYLE---SKRF 132
Query: 206 IHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+H DI NVL+ S+ K+ DFGLSR
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 24/155 (15%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSLQTEREFQNELQILGG--LRSPFLVTLLGYC 148
IGKG G V+ G R G+ +A+K FS + ER + E +I LR +LG+
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHE---NILGFI 102
Query: 149 MERNKR-------ILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGC 201
NK LV +Y + SL + L + ++ + A L LH
Sbjct: 103 AADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEI 159
Query: 202 -----DPPVIHGDIKPSNVLLDSDCRGKVSDFGLS 231
P + H D+K N+L+ + ++D GL+
Sbjct: 160 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 194
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSL----QTEREFQNELQILGGLRSPFLVTLLG 146
+GKGG F D K + ++ SL + E+ I L +V G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 147 YCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVI 206
+ + + +V E +SL E+ L ++ + + + ++LH VI
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYY--LRQIVLGCQYLHRN---RVI 161
Query: 207 HGDIKPSNVLLDSDCRGKVSDFGL-SRIKVEGE 238
H D+K N+ L+ D K+ DFGL ++++ +GE
Sbjct: 162 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 194
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSL----QTEREFQNELQILGGLRSPFLVTLLG 146
+GKGG F D K + ++ SL + E+ I L +V G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 147 YCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVI 206
+ + + +V E +SL E+ L ++ + + + ++LH VI
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYY--LRQIVLGCQYLHRN---RVI 143
Query: 207 HGDIKPSNVLLDSDCRGKVSDFGL-SRIKVEGE 238
H D+K N+ L+ D K+ DFGL ++++ +GE
Sbjct: 144 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 176
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 64/151 (42%), Gaps = 18/151 (11%)
Query: 91 IGKGGSGTVFLGIARDGK----LLAIKRLDTFSLQTERE-FQNELQILGGLRSPFLVTLL 145
IG+G G V GI + +AIK + + RE F E + P +V L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 146 GYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM----DVAKALEFLHFGC 201
G E N ++ E L+ L V K+S ++ ++ AL +L
Sbjct: 80 GVITE-NPVWIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAYLE--- 130
Query: 202 DPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+H DI NVL+ S+ K+ DFGLSR
Sbjct: 131 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 161
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSL----QTEREFQNELQILGGLRSPFLVTLLG 146
+GKGG F D K + ++ SL + E+ I L +V G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 147 YCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVI 206
+ + + +V E +SL E+ L ++ + + + ++LH VI
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYY--LRQIVLGCQYLHRNR---VI 163
Query: 207 HGDIKPSNVLLDSDCRGKVSDFGL-SRIKVEGE 238
H D+K N+ L+ D K+ DFGL ++++ +GE
Sbjct: 164 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 196
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 64/151 (42%), Gaps = 18/151 (11%)
Query: 91 IGKGGSGTVFLGIARDGK----LLAIKRLDTFSLQTERE-FQNELQILGGLRSPFLVTLL 145
IG+G G V GI + +AIK + + RE F E + P +V L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 146 GYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM----DVAKALEFLHFGC 201
G E N ++ E L+ L V K+S ++ ++ AL +L
Sbjct: 81 GVITE-NPVWIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAYLE--- 131
Query: 202 DPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+H DI NVL+ S+ K+ DFGLSR
Sbjct: 132 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 162
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSL----QTEREFQNELQILGGLRSPFLVTLLG 146
+GKGG F D K + ++ SL + E+ I L +V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 147 YCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVI 206
+ + + +V E +SL E+ L ++ + + + ++LH VI
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYY--LRQIVLGCQYLHRN---RVI 139
Query: 207 HGDIKPSNVLLDSDCRGKVSDFGL-SRIKVEGE 238
H D+K N+ L+ D K+ DFGL ++++ +GE
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 172
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSL----QTEREFQNELQILGGLRSPFLVTLLG 146
+GKGG F D K + ++ SL + E+ I L +V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 147 YCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVI 206
+ + + +V E +SL E+ L ++ + + + ++LH VI
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYY--LRQIVLGCQYLHRN---RVI 139
Query: 207 HGDIKPSNVLLDSDCRGKVSDFGL-SRIKVEGE 238
H D+K N+ L+ D K+ DFGL ++++ +GE
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 172
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 63/151 (41%), Gaps = 18/151 (11%)
Query: 91 IGKGGSGTVFLGIARD----GKLLAIKRLDTFSLQTERE-FQNELQILGGLRSPFLVTLL 145
IG+G G V GI +AIK + + RE F E + P +V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 146 GYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM----DVAKALEFLHFGC 201
G E N ++ E L+ L V K+S ++ ++ AL +L
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAYLE--- 128
Query: 202 DPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+H DI NVL+ S+ K+ DFGLSR
Sbjct: 129 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 91 IGKGGSGTVFLGIARDGKLLAIKRLDTFSL----QTEREFQNELQILGGLRSPFLVTLLG 146
+GKGG F D K + ++ SL + E+ I L +V G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 147 YCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIMDVAKALEFLHFGCDPPVI 206
+ + + +V E +SL E+ L ++ + + + ++LH VI
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYY--LRQIVLGCQYLHRN---RVI 137
Query: 207 HGDIKPSNVLLDSDCRGKVSDFGL-SRIKVEGE 238
H D+K N+ L+ D K+ DFGL ++++ +GE
Sbjct: 138 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 64/151 (42%), Gaps = 18/151 (11%)
Query: 91 IGKGGSGTVFLGIARDGK----LLAIKRLDTFSLQTERE-FQNELQILGGLRSPFLVTLL 145
IG+G G V GI + +AIK + + RE F E + P +V L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 146 GYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM----DVAKALEFLHFGC 201
G E N ++ E L+ L V K+S ++ ++ AL +L
Sbjct: 75 GVITE-NPVWIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAYLE--- 125
Query: 202 DPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+H DI NVL+ S+ K+ DFGLSR
Sbjct: 126 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 156
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 64/151 (42%), Gaps = 18/151 (11%)
Query: 91 IGKGGSGTVFLGIARDGK----LLAIKRLDTFSLQTERE-FQNELQILGGLRSPFLVTLL 145
IG+G G V GI + +AIK + + RE F E + P +V L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 146 GYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM----DVAKALEFLHFGC 201
G E N ++ E L+ L V K+S ++ ++ AL +L
Sbjct: 106 GVITE-NPVWIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAYLE--- 156
Query: 202 DPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+H DI NVL+ S+ K+ DFGLSR
Sbjct: 157 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 187
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 64/151 (42%), Gaps = 18/151 (11%)
Query: 91 IGKGGSGTVFLGIARDGK----LLAIKRLDTFSLQTERE-FQNELQILGGLRSPFLVTLL 145
IG+G G V GI + +AIK + + RE F E + P +V L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 146 GYCMERNKRILVYEYMPNKSLQEMLFSDGNLVLKWSQRFEIIM----DVAKALEFLHFGC 201
G E N ++ E L+ L V K+S ++ ++ AL +L
Sbjct: 83 GVITE-NPVWIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAYLE--- 133
Query: 202 DPPVIHGDIKPSNVLLDSDCRGKVSDFGLSR 232
+H DI NVL+ S+ K+ DFGLSR
Sbjct: 134 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 164
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 20/160 (12%)
Query: 84 DFDEANVIGKGGSGTVFLGIARDGKL-LAIKRLD----------TFSLQTEREFQNELQI 132
++ ++GKGG GTVF G +L +AIK + + S+ E ++
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 133 LGGLRSPFLVTLLGYCMERNKRILVYEY-MPNKSLQEMLFSDGNLVLKWSQRFEIIMDVA 191
G P ++ LL + + +LV E +P + L + + G L S+ F V
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCF--FGQVV 149
Query: 192 KALEFLHFGCDPPVIHGDIKPSNVLLD--SDCRGKVSDFG 229
A++ H V+H DIK N+L+D C K+ DFG
Sbjct: 150 AAIQHCHSRG---VVHRDIKDENILIDLRRGC-AKLIDFG 185
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,350,907
Number of Sequences: 62578
Number of extensions: 775430
Number of successful extensions: 3576
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 406
Number of HSP's that attempted gapping in prelim test: 1907
Number of HSP's gapped (non-prelim): 1520
length of query: 718
length of database: 14,973,337
effective HSP length: 106
effective length of query: 612
effective length of database: 8,340,069
effective search space: 5104122228
effective search space used: 5104122228
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)