Query 005035
Match_columns 717
No_of_seqs 302 out of 1292
Neff 4.2
Searched_HMMs 46136
Date Thu Mar 28 16:59:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005035.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005035hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02829 Probable galacturonos 100.0 1E-183 3E-188 1508.5 47.3 634 1-717 3-639 (639)
2 PLN02718 Probable galacturonos 100.0 1E-154 3E-159 1279.4 46.5 583 1-716 6-602 (603)
3 PLN02910 polygalacturonate 4-a 100.0 5E-144 1E-148 1192.5 42.1 468 178-716 185-656 (657)
4 PLN02742 Probable galacturonos 100.0 9E-140 2E-144 1148.8 37.2 474 172-716 56-534 (534)
5 PLN02769 Probable galacturonos 100.0 6E-136 1E-140 1134.6 43.3 457 179-716 170-629 (629)
6 PLN02870 Probable galacturonos 100.0 3E-121 7E-126 1001.0 33.6 422 215-716 89-531 (533)
7 PLN02867 Probable galacturonos 100.0 8E-121 2E-125 1000.9 33.1 421 225-716 95-534 (535)
8 PLN02659 Probable galacturonos 100.0 2E-119 5E-124 986.9 34.2 424 213-716 87-532 (534)
9 PLN02523 galacturonosyltransfe 100.0 3E-117 6E-122 972.6 32.1 458 188-717 80-559 (559)
10 cd06429 GT8_like_1 GT8_like_1 100.0 4.2E-57 9.2E-62 464.2 18.4 255 339-704 1-257 (257)
11 cd06431 GT8_LARGE_C LARGE cata 100.0 1.1E-36 2.4E-41 316.5 16.5 248 417-713 18-278 (280)
12 PRK15171 lipopolysaccharide 1, 100.0 3.2E-36 6.9E-41 319.6 16.3 245 417-710 42-292 (334)
13 cd00505 Glyco_transf_8 Members 100.0 6E-35 1.3E-39 294.3 16.0 223 417-688 18-245 (246)
14 cd04194 GT8_A4GalT_like A4GalT 100.0 3.9E-34 8.4E-39 287.1 13.5 222 416-689 16-248 (248)
15 PF01501 Glyco_transf_8: Glyco 100.0 5.4E-32 1.2E-36 264.2 11.2 233 416-690 15-249 (250)
16 COG1442 RfaJ Lipopolysaccharid 100.0 1.5E-30 3.3E-35 275.9 15.0 244 417-711 19-268 (325)
17 cd06430 GT8_like_2 GT8_like_2 100.0 2.4E-28 5.3E-33 257.1 13.0 179 516-706 78-276 (304)
18 cd06432 GT8_HUGT1_C_like The C 99.9 2.5E-27 5.4E-32 242.5 12.4 217 417-683 18-240 (248)
19 cd02537 GT8_Glycogenin Glycoge 99.9 3.9E-22 8.3E-27 202.0 14.3 154 517-704 73-238 (240)
20 PLN00176 galactinol synthase 99.9 2.1E-21 4.6E-26 207.1 12.2 174 521-706 100-294 (333)
21 cd06914 GT8_GNT1 GNT1 is a fun 99.6 1.8E-16 4E-21 165.9 7.5 141 517-691 76-242 (278)
22 KOG1879 UDP-glucose:glycoprote 99.1 8E-11 1.7E-15 140.0 4.6 176 520-704 1261-1444(1470)
23 COG5597 Alpha-N-acetylglucosam 97.4 4.8E-05 1E-09 81.4 1.5 47 521-570 155-201 (368)
24 PF03407 Nucleotid_trans: Nucl 94.8 0.056 1.2E-06 53.7 6.1 143 518-683 48-202 (212)
25 PLN03182 xyloglucan 6-xylosylt 93.6 0.23 5.1E-06 55.8 8.1 159 515-701 179-376 (429)
26 PLN03181 glycosyltransferase; 77.6 12 0.00025 42.9 9.2 35 515-550 180-214 (453)
27 PF10819 DUF2564: Protein of u 76.6 6.2 0.00013 35.4 5.4 69 219-288 6-78 (79)
28 PF05637 Glyco_transf_34: gala 70.6 2.8 6.1E-05 43.8 2.3 22 532-553 74-95 (239)
29 KOG1950 Glycosyl transferase, 63.0 12 0.00025 41.4 5.3 28 532-559 122-149 (369)
30 COG4575 ElaB Uncharacterized c 62.0 25 0.00055 33.2 6.4 75 215-291 11-86 (104)
31 PF11051 Mannosyl_trans3: Mann 59.9 5.6 0.00012 42.1 2.1 37 522-558 78-114 (271)
32 KOG1928 Alpha-1,4-N-acetylgluc 57.2 5.7 0.00012 44.8 1.6 31 522-556 229-259 (409)
33 PRK10132 hypothetical protein; 49.2 76 0.0016 30.0 7.4 76 215-292 15-90 (108)
34 TIGR02977 phageshock_pspA phag 49.0 30 0.00065 35.7 5.2 107 186-292 27-137 (219)
35 PRK10807 paraquat-inducible pr 41.7 77 0.0017 37.4 7.6 19 240-258 473-491 (547)
36 PF04012 PspA_IM30: PspA/IM30 40.9 80 0.0017 32.2 6.8 106 186-291 26-135 (221)
37 PF04488 Gly_transf_sug: Glyco 39.1 23 0.0005 31.9 2.3 37 515-555 60-97 (103)
38 PF06103 DUF948: Bacterial pro 36.2 75 0.0016 28.1 5.1 62 217-284 20-81 (90)
39 PRK10404 hypothetical protein; 31.1 2E+02 0.0044 26.8 7.1 79 212-292 5-84 (101)
40 PRK10698 phage shock protein P 28.8 98 0.0021 32.4 5.2 103 186-290 27-135 (222)
41 PF05957 DUF883: Bacterial pro 23.4 2.5E+02 0.0055 25.1 6.2 76 216-293 2-78 (94)
42 KOG2391 Vacuolar sorting prote 22.8 1.7E+02 0.0037 33.0 5.9 47 253-299 231-277 (365)
43 KOG4748 Subunit of Golgi manno 22.0 3.3E+02 0.0071 31.1 7.9 36 515-551 157-192 (364)
44 cd04181 NTP_transferase NTP_tr 21.6 3.2E+02 0.0069 26.6 7.1 22 535-556 96-117 (217)
45 COG1842 PspA Phage shock prote 21.0 1.3E+02 0.0028 31.9 4.3 102 186-291 27-136 (225)
46 PF10146 zf-C4H2: Zinc finger- 21.0 1.6E+02 0.0034 31.3 5.1 115 197-319 13-127 (230)
47 PLN02829 Probable galacturonos 20.7 7.5E+02 0.016 30.3 10.8 69 213-281 180-250 (639)
No 1
>PLN02829 Probable galacturonosyltransferase
Probab=100.00 E-value=1.3e-183 Score=1508.48 Aligned_cols=634 Identities=76% Similarity=1.208 Sum_probs=607.4
Q ss_pred CcchhHHHHHHHHHhhcceeEEeccccccCCCCcccchhhhhcccceecCCCccccccccccccccccCCCe-EEeeccc
Q 005035 1 MKTRNLVVGMLCATVLAPILIFTSTFKDSYPSSSESGEFLEDLTAFTVGGDARHLNLLPQESSTTLSLKQPI-LVISDKI 79 (717)
Q Consensus 1 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~ 79 (717)
|+.|++||+|||+||+|||+|||+||+++| ||++++||+|||+++++++|+.+||+||||+++ +||||+ |||+|++
T Consensus 3 ~~~r~~~~~~l~~~v~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~lk~p~~~~~~~~~ 79 (639)
T PLN02829 3 MRLRNLVLGLLLLTVLSPILLYTDRLSASF-TPSSKRDFLEDVTALTLGGDASKLNVLPQESSS--SLKEPIGIVYSDNS 79 (639)
T ss_pred HHHHHHHHHHHHHHHhhceeEEeccccccc-CCcchhhhhHHHHhhccCccchhcccccccccc--cccCceeEEeeccc
Confidence 567999999999999999999999999987 999999999999999999999999999999999 999999 9999998
Q ss_pred cc--ccccccccccCcccccccceeeeeccCCCCCCCCCcccccccchhhhhcccchhhhhhcccccccccccccccccc
Q 005035 80 AQ--HSAHSQSQSQGSWEHKSARVLSATTNGLDQSKTDNPIRQVTDLTKTQINKHADQEQIKASDNHISAHHSQILDTKH 157 (717)
Q Consensus 80 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (717)
+. ....+++++++.+||+ +||||+| +++++|++|++|+|||+...+....+.+ +++.+.+.++..++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 150 (639)
T PLN02829 80 SKTIEPDSQDLLLDKRGEHK-ARVLSAT-DDDTHSQTDDIIKQVTQKAGQDDSDQQE-------KNSQSQSASQAESLEH 150 (639)
T ss_pred cccccccccccccccccchh-hhhcccc-ccccccccchhHHHhhhccccccccccc-------ccccccccccccchhh
Confidence 87 3557789999999999 7999997 6669999999999999876544332221 2455566677888899
Q ss_pred cccccccccccccCCccccccccccCCCCCchhHHHHhhhhHHHHHhhccccccCCchHHHHHHHHHHHHHHHhhcccCC
Q 005035 158 QQESSLTYGVLEKKEPTKINNEKQTEQTTPPDFRVRQLKDQLIKAKVYLSLPAMRNNANFVRELRLRIKEVQRALGDATK 237 (717)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dq~~~a~~y~~~~~~~~~~~~~~el~~~~~e~~~~~~~a~~ 237 (717)
.|++.++++++..++|...+++++|++++|+|++||+||||||+||||++|||+++|++|+||||+||||+||+||+|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~lkDql~~AkaY~~iak~~~~~~l~~el~~~i~e~~r~l~~a~~ 230 (639)
T PLN02829 151 VQQSAQTSEKVDEKEPLLTKTDKQTDQTVMPDARVRQLRDQLIKAKVYLSLPATKANPHFTRELRLRIKEVQRVLGDASK 230 (639)
T ss_pred hhhhhccccccccccccccccccccccccCchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHhhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHhccCCccHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhccCCCccccccccchhhH
Q 005035 238 DSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLPKGLHCLPLRLTTEY 317 (717)
Q Consensus 238 d~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~~~~~~~~l~~~~~pk~~hcl~~rl~~e~ 317 (717)
|+|||+++.++|++||++|++||++++||+++++||||||+++|||+++||+|++|++||||+|+|||||||+||||+||
T Consensus 231 d~~lp~~~~~~~~~m~~~i~~ak~~~~d~~~~~~KLr~~l~~~Ee~~~~~~~q~~~l~~laa~t~PK~lHCL~mrLt~Ey 310 (639)
T PLN02829 231 DSDLPKNANEKLKAMEQTLAKGKQMQDDCSIVVKKLRAMLHSAEEQLRVHKKQTMFLTQLTAKTLPKGLHCLPLRLTTEY 310 (639)
T ss_pred CCCCChhHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCccccchhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCcccCCCCCCCCccCCCcceEEEEeCceEEEEeeechhcchhhhhhhhhhHhhhhhhHHhhhhhhhHHHHHhhhhhH
Q 005035 318 YTLNSSQRHFPNQEKLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKVIYSSLKYALILPLVAKKIGENIRKLAISFLYSF 397 (717)
Q Consensus 318 ~~~~~~~~~~~~~~~~~d~~~~h~~~~sdnvla~~vvvnstv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (717)
|+++++++++|++|+|+||++|||||||||||||||||||||+||
T Consensus 311 ~~~~~~~~~~p~~~~l~dp~l~Hy~ifSdNVLAasVVVnStv~na----------------------------------- 355 (639)
T PLN02829 311 YNLNSSEQQFPNQEKLEDPQLYHYALFSDNVLAAAVVVNSTVTNA----------------------------------- 355 (639)
T ss_pred HhCChhhccCCChhhccCCccceEEEEecceeEEEeeeehhhhcc-----------------------------------
Confidence 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhccccccccccccCCCCCCCCCCCCCCccEEEEEEeCcccHHHHHHHHHhCCCCCceEEEEeeccccc
Q 005035 398 VFLERWFRASINLLSFQRRPLLSVDMSNSPCCIEPLQHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTW 477 (717)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~i~sil~ns~~~~e~~kep~~lVFHIVTD~~ny~aMk~WF~~Np~~~A~IeV~nIedf~w 477 (717)
++|++||||||||++||+||++||++||+++|+|||+|||+|+|
T Consensus 356 ------------------------------------~~p~k~VFHivTD~~ny~aM~~WF~~n~~~~A~v~V~nie~f~w 399 (639)
T PLN02829 356 ------------------------------------KHPSKHVFHIVTDRLNYAAMRMWFLVNPPGKATIQVQNIEEFTW 399 (639)
T ss_pred ------------------------------------cCccceEEEEecCccchHHHHHHHhhCCCccceEEEEehhhccc
Confidence 99999999999999999999999999999999999999999999
Q ss_pred ccCcchHHHhhcccccceeEEecccccCCCcccccCCCCCccHhhhHHhhhhhhcCCCCeEEEEecCeeEecCchhhhcc
Q 005035 478 LNSSYSPVLKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSI 557 (717)
Q Consensus 478 ln~s~~PVLkqL~s~~ii~~yF~~~~~~sd~~lk~r~p~yiS~lnylRFfIPeLfPelDKVLYLD~DVIVqgDLseLwdi 557 (717)
+|++|+||++||++..+++|||+.+..+++.++++|+|+|+|.++|+|||||++||+++||||||+||||++||++||++
T Consensus 400 ln~~~~pvl~ql~~~~~~~~yf~~~~~~~~~~~k~r~p~ylS~lnY~RfyLPeLLP~LdKVLYLD~DVVVqgDLseLw~i 479 (639)
T PLN02829 400 LNSSYSPVLKQLGSQSMIDYYFRAHRANSDSNLKYRNPKYLSILNHLRFYLPEIFPKLNKVLFLDDDIVVQKDLTGLWSI 479 (639)
T ss_pred ccccccHHHHHhhhhhhhhhhhhccccCcccccccCCcchhhHHHHHHHHHHHHhcccCeEEEEeCCEEeCCChHHHHhC
Confidence 99999999999999999999999988777889999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeeEEeecccccccccccccccCCcccccCCCCCCCceeeeeeeeechHHHHhhHHHHHHHHHHhcccccccccCC
Q 005035 558 DLKGKVNGAVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGT 637 (717)
Q Consensus 558 DL~GkviAAVeDc~~~f~ry~~YLNfSnP~i~~~fdp~~cyFNSGVLLIDL~kWRe~nITeky~~w~k~N~d~~L~dqGd 637 (717)
||+|+++|||+||...+++|..|++|++|.+..+|++..||||+|||||||++||++++|++|++|++.+.++.+|++|+
T Consensus 480 DL~gkviAAVedc~~~f~r~~~~l~fs~p~i~~~Fn~~~CyFNSGVmVINL~~WRe~nITe~y~~wm~~n~~r~L~dlga 559 (639)
T PLN02829 480 DLKGNVNGAVETCGESFHRFDRYLNFSNPLISKNFDPHACGWAYGMNVFDLDEWKRQNITEVYHSWQKLNHDRQLWKLGT 559 (639)
T ss_pred CCCCceEEEeccchhhhhhhhhhhhccchHhhhccCCcccceecceEEEeHHHHHHhChHHHHHHHHHHccCCccccccC
Confidence 99999999999999888899999999999988899999999999999999999999999999999999988888999999
Q ss_pred CCccccccccceeeccCccccccCCCCCCCcccccCCCeEEEeeCCCCCcccCCccccHHHHHHHhccCcchhhhccCCC
Q 005035 638 LPPGLITFWKRTYPLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNINP 717 (717)
Q Consensus 638 Lp~~Li~F~g~i~~LD~rWN~lgLGy~~~is~e~ie~aaIIHYnG~~KPWl~~~~~~Yrd~WwkY~~~d~~flr~Cni~~ 717 (717)
||+++++|+|++++||++||++|+||++.+..+.+++|+||||+|++|||.+.++++|+++|.+|++++++|+++|||||
T Consensus 560 LPp~Ll~F~g~i~~LD~rWNv~GLGy~~~v~~~~i~~aaIIHynG~~KPWle~~i~~yr~lW~kYl~~~~~fl~~Cni~p 639 (639)
T PLN02829 560 LPPGLITFWKRTYPLDRSWHVLGLGYNPNVNQRDIERAAVIHYNGNMKPWLEIGIPKYRNYWSKYVDYDQVYLRECNINP 639 (639)
T ss_pred CChHHHHhcCceEecChhheecCCCCCcccchhcccCCeEEEECCCCCccccCCcccchHHHHHHHhcCchHHHhCCCCC
Confidence 99999999999999999999999999998888889999999999999999999999999999999999999999999998
No 2
>PLN02718 Probable galacturonosyltransferase
Probab=100.00 E-value=1.2e-154 Score=1279.37 Aligned_cols=583 Identities=45% Similarity=0.841 Sum_probs=539.8
Q ss_pred CcchhHHHHHHHHHhhcceeEEeccccccCCCCcccchhhhhcccceecCCCccccccccccccccccCCCe-EEeeccc
Q 005035 1 MKTRNLVVGMLCATVLAPILIFTSTFKDSYPSSSESGEFLEDLTAFTVGGDARHLNLLPQESSTTLSLKQPI-LVISDKI 79 (717)
Q Consensus 1 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~ 79 (717)
|+.|++||+|||+||||||+|||+||+++ +|++++||+|||+++++++|+.+||+||||+++ +||||+ |||+|++
T Consensus 6 ~~~r~~~~~~l~~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~lk~~~~~~~~~~~ 81 (603)
T PLN02718 6 RWQRILILSLLSLSVFAPLIFVSNRLKSI--TPVGRKEFIEELSTIRYRTDDLRLSAIEQEEGE--GLKGPKLVIYQDGD 81 (603)
T ss_pred HHHHHHHHHHHHHHHhhceeEeecccccc--CccchhhhHHHHhhhccccCccccccccccccc--cccCceeEEeecCC
Confidence 45799999999999999999999999997 999999999999999999999999999999999 999999 9999998
Q ss_pred ccccccc-------cc---cccCcccccccceeeeeccCCCCCCCCCcccccccchhhhhcccchhhhhhcccccccccc
Q 005035 80 AQHSAHS-------QS---QSQGSWEHKSARVLSATTNGLDQSKTDNPIRQVTDLTKTQINKHADQEQIKASDNHISAHH 149 (717)
Q Consensus 80 ~~~~~~~-------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (717)
++..... ++ ++++.++|| +| +++.+|+|+|..+.++....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~------------~~~~~~~~~~~~~~~~~~~~----------------- 131 (603)
T PLN02718 82 FNSVVSYNSSDKNNDSLESEVDGGNNHK-PK------------EEQAQVSQKTTVSSSEEVQI----------------- 131 (603)
T ss_pred cCccccccccccccchhhhhccCccccc-cc------------hhcccchheeeccccccccc-----------------
Confidence 8653221 24 999999999 44 67889999987665443111
Q ss_pred cccccccccccccccccccccCCccccccccccCCCCCchhHHHHhhhhHHHHHhhccccccCCchHHHHHHHHHHHHHH
Q 005035 150 SQILDTKHQQESSLTYGVLEKKEPTKINNEKQTEQTTPPDFRVRQLKDQLIKAKVYLSLPAMRNNANFVRELRLRIKEVQ 229 (717)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dq~~~a~~y~~~~~~~~~~~~~~el~~~~~e~~ 229 (717)
+..+++..|++..+ .++...++++||+++.|+|++||+||||||+||||++|||+++|++|+||||+||||+|
T Consensus 132 -~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~d~~v~~~~dql~~ak~y~~~a~~~~~~~~~~el~~~i~e~~ 204 (603)
T PLN02718 132 -SARDIQLNHKTQFN------PPTVKHEKNTRVQPRRATDEKVKEIRDKIIQAKAYLNLAPPGSNSQLVKELRLRTKELE 204 (603)
T ss_pred -chhhhhhhhhhccC------CCcccccccCcCCcccCcHHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHH
Confidence 11222222222222 24556799999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccCCCCCCchhHHHHHHHHHHHHHHhccCCccHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhccCCCccccc
Q 005035 230 RALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLPKGLHCL 309 (717)
Q Consensus 230 ~~~~~a~~d~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~~~~~~~~l~~~~~pk~~hcl 309 (717)
|+||+|+.|+|||+++.++|++||++|+|||++++||++|++|||||++++|||+++||+|++|++||||+|+|||||||
T Consensus 205 ~~l~~~~~d~~lp~~~~~~~~~m~~~~~~a~~~~~d~~~~~~klr~~~~~~e~~~~~~~~q~~~~~~laa~~~PK~lhCL 284 (603)
T PLN02718 205 RAVGDATKDKDLSKSALQRMKSMEVTLYKASRVFPNCPAIATKLRAMTYNTEEQVRAQKNQAAYLMQLAARTTPKGLHCL 284 (603)
T ss_pred HHHhcccCCCCCCHhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhhHhhCCcccCCCCCCCCccCCCcceEEEEeCceEEEEeeechhcchhhhhhhhhhHhhhhhhHHhhhhhhhHHH
Q 005035 310 PLRLTTEYYTLNSSQRHFPNQEKLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKVIYSSLKYALILPLVAKKIGENIRKL 389 (717)
Q Consensus 310 ~~rl~~e~~~~~~~~~~~~~~~~~~d~~~~h~~~~sdnvla~~vvvnstv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (717)
+||||+|||+++++++++|++|+|+||+++|||+|||||+||||||||++.||
T Consensus 285 ~~rLt~ey~~~~~~~~~~~~~~~l~d~~~~Hia~~sDNvlaasVvInSil~Ns--------------------------- 337 (603)
T PLN02718 285 SMRLTAEYFALDPEKRQLPNQQRYNDPDLYHYVVFSDNVLACSVVVNSTISSS--------------------------- 337 (603)
T ss_pred chhhHHHHhhCChhhccCCChhhccCCcceeEEEEcCCceeEEEEhhhhhhcc---------------------------
Confidence 99999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhHHHHHHHHHhhhhhccccccccccccCCCCCCCCCCCCCCccEEEEEEeCcccHHHHHHHHHhCCCCCceEEE
Q 005035 390 AISFLYSFVFLERWFRASINLLSFQRRPLLSVDMSNSPCCIEPLQHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQV 469 (717)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sil~ns~~~~e~~kep~~lVFHIVTD~~ny~aMk~WF~~Np~~~A~IeV 469 (717)
++|++++||||||++++++|++||..++..+++|+|
T Consensus 338 --------------------------------------------~np~~ivFHVvTD~is~~~mk~wf~l~~~~~a~I~V 373 (603)
T PLN02718 338 --------------------------------------------KEPEKIVFHVVTDSLNYPAISMWFLLNPPGKATIQI 373 (603)
T ss_pred --------------------------------------------CCCCcEEEEEEeCCCCHHHHHHHHHhCCCCCcEEEE
Confidence 899999999999999999999999999999999999
Q ss_pred EeecccccccCcchHHHhhcccccceeEEecccccCCCcccccCCCCCccHhhhHHhhhhhhcCCCCeEEEEecCeeEec
Q 005035 470 QNIEEFTWLNSSYSPVLKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQK 549 (717)
Q Consensus 470 ~nIedf~wln~s~~PVLkqL~s~~ii~~yF~~~~~~sd~~lk~r~p~yiS~lnylRFfIPeLfPelDKVLYLD~DVIVqg 549 (717)
+++++|.|++.++.++++++++ ++|+|+|+++|+||+||++||+++||||||+|+||++
T Consensus 374 ~~Iddf~~lp~~~~~~lk~l~s---------------------~~~~~~S~~~y~Rl~ipellp~l~KvLYLD~DvVV~~ 432 (603)
T PLN02718 374 LNIDDMNVLPADYNSLLMKQNS---------------------HDPRYISALNHARFYLPDIFPGLNKIVLFDHDVVVQR 432 (603)
T ss_pred Eecchhccccccchhhhhhccc---------------------cccccccHHHHHHHHHHHHhcccCEEEEEECCEEecC
Confidence 9999999999999998888754 2578999999999999999999999999999999999
Q ss_pred CchhhhccCCCCCeeEEeecccc---cccccccccccCCcccccCCCCCCCceeeeeeeeechHHHHhhHHHHHHHHHHh
Q 005035 550 DLSGLWSIDLKGKVNGAVETCGE---TFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKM 626 (717)
Q Consensus 550 DLseLwdiDL~GkviAAVeDc~~---~f~ry~~YLNfSnP~i~~~fdp~~cyFNSGVLLIDL~kWRe~nITeky~~w~k~ 626 (717)
||++||++||+|+++|||+||.. .+++++.|++|++|++.++|+++.||||+|||||||++||++++++++++|++.
T Consensus 433 DL~eL~~iDl~~~v~aaVedC~~~~~~~~~~~~~lnfs~p~i~~~fn~~~CyfNsGVlLIDLk~WReenITe~~~~~l~~ 512 (603)
T PLN02718 433 DLSRLWSLDMKGKVVGAVETCLEGEPSFRSMDTFINFSDPWVAKKFDPKACTWAFGMNLFDLEEWRRQKLTSVYHKYLQL 512 (603)
T ss_pred CHHHHhcCCCCCcEEEEeccccccccchhhhhhhhhccchhhhcccCCCccccccceEEEeHHHHHhcChHHHHHHHHHh
Confidence 99999999999999999999975 356677889999999888999999999999999999999999999999999998
Q ss_pred cccccccccCCCCccccccccceeeccCccccccCCCCCCCcccccCCCeEEEeeCCCCCcccCCccccHHHHHHHhccC
Q 005035 627 NHDRQLWKLGTLPPGLITFWKRTYPLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYD 706 (717)
Q Consensus 627 N~d~~L~dqGdLp~~Li~F~g~i~~LD~rWN~lgLGy~~~is~e~ie~aaIIHYnG~~KPWl~~~~~~Yrd~WwkY~~~d 706 (717)
+.++.+|+||+||+++++|+|++++||++||++|+||++.++.+.+++|+||||+|++|||++.++++|+++|.+|++++
T Consensus 513 n~~~~l~dqdaLpp~LlvF~gri~~LD~rWNv~gLG~~~~i~~~~i~~aaIIHYnG~~KPWle~~i~~yr~~W~k~v~~~ 592 (603)
T PLN02718 513 GVKRPLWKAGSLPIGWLTFYNQTVALDKRWHVLGLGHESGVGASDIEQAAVIHYDGVMKPWLDIGIGKYKRYWNIHVPYH 592 (603)
T ss_pred ccCccccCcccccHHHHHhcCceeecChHHhccCccccccccccccCCCEEEEECCCCCccccCChhhHHHHHHhhcCCC
Confidence 87778999999999999999999999999999999999877777889999999999999999999999999999999999
Q ss_pred cchhhhccCC
Q 005035 707 QLYLRECNIN 716 (717)
Q Consensus 707 ~~flr~Cni~ 716 (717)
++|+++|||+
T Consensus 593 ~~~l~~Cn~~ 602 (603)
T PLN02718 593 HPYLQQCNIH 602 (603)
T ss_pred ChHHHhcCCC
Confidence 9999999997
No 3
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=100.00 E-value=4.7e-144 Score=1192.50 Aligned_cols=468 Identities=59% Similarity=1.070 Sum_probs=455.1
Q ss_pred cccccCCCCCchhHHHHhhhhHHHHHhhccccccCCchHHHHHHHHHHHHHHHhhcccCCCCCCchhHHHHHHHHHHHHH
Q 005035 178 NEKQTEQTTPPDFRVRQLKDQLIKAKVYLSLPAMRNNANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLA 257 (717)
Q Consensus 178 ~~~~~~~~~~~d~~~~~~~dq~~~a~~y~~~~~~~~~~~~~~el~~~~~e~~~~~~~a~~d~~~~~~~~~~~~~~~~~~~ 257 (717)
-|.+.-..+|+|++||+||||||+||||++|||++||++|+||||+||||+||+||+|++|+|||+++.++|++||++|+
T Consensus 185 ~w~~e~~~~~~d~~vk~lkDQl~~AkaY~~iak~~~~~~l~~eL~~~i~e~~r~ls~a~~d~dlp~~~~~k~~~M~~~l~ 264 (657)
T PLN02910 185 IWRRDYESPNSDSILKLMRDQIIMAKAYANIAKSNNVTNLYVSLMKQFRENKRAIGEATSDAELHSSALDQAKAMGHVLS 264 (657)
T ss_pred eecccccccCcHHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHhhcccccccCchHHHHHHHHHHHHH
Confidence 37777778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCccHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhccCCCccccccccchhhHhhCCcccCCCCCCCCccCCC
Q 005035 258 KGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLPKGLHCLPLRLTTEYYTLNSSQRHFPNQEKLEDPR 337 (717)
Q Consensus 258 ~~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~~~~~~~~l~~~~~pk~~hcl~~rl~~e~~~~~~~~~~~~~~~~~~d~~ 337 (717)
+||++++||++|++||||||++||||+++||+|++||+||||+|+|||||||+||||+|||++++.++++|++|+|+||+
T Consensus 265 ~ak~~~~d~~~~~~KLraml~~~Ee~~~~~k~qs~~l~qlaa~t~PK~lHCL~mRLt~Ey~~~~~~~~~~p~~~~l~dp~ 344 (657)
T PLN02910 265 IAKDQLYDCHTMARKLRAMLQSTERKVDALKKKSAFLIQLAAKTVPKPLHCLPLQLAADYFLLGFQNKDYVNKKKLEDPS 344 (657)
T ss_pred HHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCccccchhhHHHHHhCchhhccCCChhhccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEEeCceEEEEeeechhcchhhhhhhhhhHhhhhhhHHhhhhhhhHHHHHhhhhhHHHHHHHHHhhhhhccccccc
Q 005035 338 LFHYALFSDNVLAAAVVVNSTVTHAKVIYSSLKYALILPLVAKKIGENIRKLAISFLYSFVFLERWFRASINLLSFQRRP 417 (717)
Q Consensus 338 ~~h~~~~sdnvla~~vvvnstv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (717)
+|||||||||||||||||||||+||
T Consensus 345 l~Hy~ifSDNVLAaSVVVnSTv~na------------------------------------------------------- 369 (657)
T PLN02910 345 LYHYAIFSDNVLATSVVVNSTVLHA------------------------------------------------------- 369 (657)
T ss_pred ceeEEEEecceeeEEeehhhhhhcc-------------------------------------------------------
Confidence 9999999999999999999999999
Q ss_pred cccccCCCCCCCCCCCCCCccEEEEEEeCcccHHHHHHHHHhCCCCCceEEEEeecccccccCcchHHHhhcccccceeE
Q 005035 418 LLSVDMSNSPCCIEPLQHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMIDY 497 (717)
Q Consensus 418 ~i~sil~ns~~~~e~~kep~~lVFHIVTD~~ny~aMk~WF~~Np~~~A~IeV~nIedf~wln~s~~PVLkqL~s~~ii~~ 497 (717)
++|++||||||||++||+||++||++||+++|+|||+|||+|+|++++|+||++|+++..++++
T Consensus 370 ----------------~~P~k~VFHiVTD~~ny~aM~~WF~~n~~~~A~V~V~nie~f~wln~~~~pvl~qles~~~~~~ 433 (657)
T PLN02910 370 ----------------KEPQKHVFHIVTDKLNFAAMKMWFIINPPAKATIQVENIDDFKWLNSSYCSVLRQLESARIKEY 433 (657)
T ss_pred ----------------cCccceEEEEecCccccHHHHHHHhhCCCccceEEEeehhhcccccccccHHHHHHhhhhhhhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecccccCC----CcccccCCCCCccHhhhHHhhhhhhcCCCCeEEEEecCeeEecCchhhhccCCCCCeeEEeeccccc
Q 005035 498 YFRAHRANS----DSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGET 573 (717)
Q Consensus 498 yF~~~~~~s----d~~lk~r~p~yiS~lnylRFfIPeLfPelDKVLYLD~DVIVqgDLseLwdiDL~GkviAAVeDc~~~ 573 (717)
||..+..++ ..++++|+|+|+|+++|+|||||++||+++||||||+||||++||++||++||+|+++|||+||...
T Consensus 434 yf~~~~~~~~~~~~~~~k~r~p~ylS~lnY~Rf~LPelLp~l~KVLYLD~DVVV~gDLseLw~iDL~g~v~AAVedc~~~ 513 (657)
T PLN02910 434 YFKANHPSSLSAGADNLKYRNPKYLSMLNHLRFYLPEVYPKLEKILFLDDDIVVQKDLTPLWSIDMQGMVNGAVETCKES 513 (657)
T ss_pred hhhccccccccccccccccCCcchhhHHHHHHHHHHHHhhhcCeEEEEeCCEEecCchHHHHhCCcCCceEEEecccchh
Confidence 998755432 3578999999999999999999999999999999999999999999999999999999999999988
Q ss_pred ccccccccccCCcccccCCCCCCCceeeeeeeeechHHHHhhHHHHHHHHHHhcccccccccCCCCccccccccceeecc
Q 005035 574 FHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKRTYPLD 653 (717)
Q Consensus 574 f~ry~~YLNfSnP~i~~~fdp~~cyFNSGVLLIDL~kWRe~nITeky~~w~k~N~d~~L~dqGdLp~~Li~F~g~i~~LD 653 (717)
++++..|++|++|.+...|+++.||||+|||||||++||++++|+.++.|++.+.+..+|++|+||+++++|+|++++||
T Consensus 514 f~r~~~ylnfs~P~i~~yFNs~aCyfNsGVmVIDL~~WRe~nITe~ye~w~eln~~~~L~dqgsLPpgLLvF~g~i~pLD 593 (657)
T PLN02910 514 FHRFDKYLNFSNPKISENFDPNACGWAFGMNMFDLKEWRKRNITGIYHYWQDLNEDRTLWKLGSLPPGLITFYNLTYPLD 593 (657)
T ss_pred hhhhhhhhccCChhhhhccCCCCceeecccEEEeHHHHHHhhHHHHHHHHHHhcccccccccCCCChHHHHHhCceeecC
Confidence 88999999999999988999999999999999999999999999999999999988899999999999999999999999
Q ss_pred CccccccCCCCCCCcccccCCCeEEEeeCCCCCcccCCccccHHHHHHHhccCcchhhhccCC
Q 005035 654 RFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNIN 716 (717)
Q Consensus 654 ~rWN~lgLGy~~~is~e~ie~aaIIHYnG~~KPWl~~~~~~Yrd~WwkY~~~d~~flr~Cni~ 716 (717)
++||++|+||++.++.+.+++|+||||+|++|||.+.++++|+++|.+|++++++|+++|||+
T Consensus 594 ~rWNv~GLGyd~~v~~~~i~~AAVLHynG~~KPWl~l~i~~Yr~~W~kYl~~d~~fl~~Cni~ 656 (657)
T PLN02910 594 RSWHVLGLGYDPALNQTEIENAAVVHYNGNYKPWLDLAIAKYKPYWSRYVQYDNPYLQLCNIS 656 (657)
T ss_pred chheecCCCCCcccccccccCcEEEEeCCCCCcccccCcccchHHHHHHccCCChHHHhCCCC
Confidence 999999999999888888999999999999999999999999999999999999999999997
No 4
>PLN02742 Probable galacturonosyltransferase
Probab=100.00 E-value=9.4e-140 Score=1148.83 Aligned_cols=474 Identities=50% Similarity=0.881 Sum_probs=457.0
Q ss_pred CccccccccccCCCCCchhHHHHhhhhHHHHHhhccccccCCchHHHHHHHHHHHHHHHhhcccCCCCCC--chhHHHHH
Q 005035 172 EPTKINNEKQTEQTTPPDFRVRQLKDQLIKAKVYLSLPAMRNNANFVRELRLRIKEVQRALGDATKDSDL--PRIANDRL 249 (717)
Q Consensus 172 ~~~~~~~~~~~~~~~~~d~~~~~~~dq~~~a~~y~~~~~~~~~~~~~~el~~~~~e~~~~~~~a~~d~~~--~~~~~~~~ 249 (717)
+....+.-+-|+|+.++|++||+||||||+||||++|||++||++|+||||+||||+||+||+|++|+++ |+++.++|
T Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~l~dql~~Ak~y~~ia~~~~~~~l~~el~~~i~e~~~~l~~a~~d~~~~~~~~~~~~~ 135 (534)
T PLN02742 56 EEVNHEGLNFTEEMLSATSFSRQLADQITLAKAYVVIAKEHNNLQLAWELSAQIRNCQLLLSKAATRGEPITVEEAEPII 135 (534)
T ss_pred cccccccccchhhhcChHHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHhhcccccCCchhHHHHH
Confidence 3444566678999999999999999999999999999999999999999999999999999999999887 38999999
Q ss_pred HHHHHHHHHhccCCccHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhccCCCccccccccchhhHhhCCccc---CC
Q 005035 250 KAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLPKGLHCLPLRLTTEYYTLNSSQ---RH 326 (717)
Q Consensus 250 ~~~~~~~~~~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~~~~~~~~l~~~~~pk~~hcl~~rl~~e~~~~~~~~---~~ 326 (717)
++||++|++||++++||+++++||||||++||||+++||+|++|++||||+|+|||||||+||||+|||++++++ ++
T Consensus 136 ~~m~~~i~~ak~~~~d~~~~~~klr~~l~~~e~~~~~~~~q~~~~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~ 215 (534)
T PLN02742 136 RDLAALIYQAQDLHYDSATTIMTLKAHIQALEERANAATVQSTKFGQLAAEALPKSLYCLGVRLTTEWFKNPKLQRKAEE 215 (534)
T ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCccccchHhHHHHHhCchhhhcccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999985 45
Q ss_pred CCCCCCccCCCcceEEEEeCceEEEEeeechhcchhhhhhhhhhHhhhhhhHHhhhhhhhHHHHHhhhhhHHHHHHHHHh
Q 005035 327 FPNQEKLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKVIYSSLKYALILPLVAKKIGENIRKLAISFLYSFVFLERWFRA 406 (717)
Q Consensus 327 ~~~~~~~~d~~~~h~~~~sdnvla~~vvvnstv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (717)
+|++++|+||++|||||||||||||||||||||+||
T Consensus 216 ~~~~~~l~d~~l~Hy~ifSdNvlAasvvvnStv~ns-------------------------------------------- 251 (534)
T PLN02742 216 KRNSPRLVDNNLYHFCVFSDNILATSVVVNSTVSNA-------------------------------------------- 251 (534)
T ss_pred ccccccccCCCcceEEEEeccchhhhhhhhhhHhhh--------------------------------------------
Confidence 788899999999999999999999999999999999
Q ss_pred hhhhccccccccccccCCCCCCCCCCCCCCccEEEEEEeCcccHHHHHHHHHhCCCCCceEEEEeecccccccCcchHHH
Q 005035 407 SINLLSFQRRPLLSVDMSNSPCCIEPLQHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVL 486 (717)
Q Consensus 407 ~~~~~~~~~~~~i~sil~ns~~~~e~~kep~~lVFHIVTD~~ny~aMk~WF~~Np~~~A~IeV~nIedf~wln~s~~PVL 486 (717)
++|+++|||||||++||++|++||.+|++++|+|+|+|+|+|+|++.+|+||+
T Consensus 252 ---------------------------k~P~~~VFHiVTD~~n~~aM~~WF~~n~~~~a~v~V~n~e~f~wl~~~~~pvl 304 (534)
T PLN02742 252 ---------------------------KHPDQLVFHLVTDEVNYGAMQAWFAMNDFKGVTVEVQKIEEFSWLNASYVPVL 304 (534)
T ss_pred ---------------------------cCCCcEEEEEeechhhHHHHHHHHhhCCCCccEEEEEEeccccccccccchHH
Confidence 99999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccceeEEecccccCCCcccccCCCCCccHhhhHHhhhhhhcCCCCeEEEEecCeeEecCchhhhccCCCCCeeEE
Q 005035 487 KQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGA 566 (717)
Q Consensus 487 kqL~s~~ii~~yF~~~~~~sd~~lk~r~p~yiS~lnylRFfIPeLfPelDKVLYLD~DVIVqgDLseLwdiDL~GkviAA 566 (717)
|||+++.+++|||+++..+...+.++|+|+|+|+++|+||+||++||+++||||||+|+||++||++||++||+|+++||
T Consensus 305 ~ql~~~~~~~~yf~~~~~~~~~~~k~r~p~y~s~~~y~R~~lP~llp~l~KvlYLD~DvVV~~DL~eL~~~DL~~~viaA 384 (534)
T PLN02742 305 KQLQDSDTQSYYFSGSQDDGKTEIKFRNPKYLSMLNHLRFYIPEIYPALEKVVFLDDDVVVQKDLTPLFSIDLHGNVNGA 384 (534)
T ss_pred HHhhhhhhhhhhcccccccccccccccCcccccHHHHHHHHHHHHhhccCeEEEEeCCEEecCChHHHhcCCCCCCEEEE
Confidence 99999999999999988666677889999999999999999999999999999999999999999999999999999999
Q ss_pred eecccccccccccccccCCcccccCCCCCCCceeeeeeeeechHHHHhhHHHHHHHHHHhcccccccccCCCCccccccc
Q 005035 567 VETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFW 646 (717)
Q Consensus 567 VeDc~~~f~ry~~YLNfSnP~i~~~fdp~~cyFNSGVLLIDL~kWRe~nITeky~~w~k~N~d~~L~dqGdLp~~Li~F~ 646 (717)
|+||+..+++|.+|+||++|.+..+|+++.||||+|||||||++||++++|+.++.|++.+.+..+|++|+||+++++|+
T Consensus 385 VedC~~~f~ry~~yLnfS~p~i~~~f~~~aC~fNsGV~ViDL~~WRe~nITe~~~~w~e~n~~~~l~d~gaLpp~LLaF~ 464 (534)
T PLN02742 385 VETCLETFHRYHKYLNFSHPLISSHFDPDACGWAFGMNVFDLVAWRKANVTAIYHYWQEQNVDRTLWKLGTLPPGLLTFY 464 (534)
T ss_pred eCchhhhhhhhhhhhcccchhhhccCCCCccccccCcEEEeHHHHHhhcHHHHHHHHHHhccccccccccccchHHHHHc
Confidence 99999889999999999999999999999999999999999999999999999999999998889999999999999999
Q ss_pred cceeeccCccccccCCCCCCCcccccCCCeEEEeeCCCCCcccCCccccHHHHHHHhccCcchhhhccCC
Q 005035 647 KRTYPLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNIN 716 (717)
Q Consensus 647 g~i~~LD~rWN~lgLGy~~~is~e~ie~aaIIHYnG~~KPWl~~~~~~Yrd~WwkY~~~d~~flr~Cni~ 716 (717)
|++.+||++||++|+||++.++.+.+++|+||||+|++|||.+.++++|+++|++|++++++|+++|||+
T Consensus 465 g~~~~LD~rWNv~gLG~~~~v~~~~i~~aaILHynG~~KPWl~~~i~~yr~~W~kYl~~s~~fl~~Cni~ 534 (534)
T PLN02742 465 GLTEPLDRRWHVLGLGYDTNIDPRLIESAAVLHFNGNMKPWLKLAIERYKPLWERYVNYSHPYLQQCNFH 534 (534)
T ss_pred CcceecChhheecccccccccchhhccCCeEEEECCCCCcccccCCcccchHHHHHHccCCHHHHhCCCC
Confidence 9999999999999999998887788999999999999999999999999999999999999999999996
No 5
>PLN02769 Probable galacturonosyltransferase
Probab=100.00 E-value=5.8e-136 Score=1134.60 Aligned_cols=457 Identities=43% Similarity=0.748 Sum_probs=432.0
Q ss_pred ccccCCCCCchhHHHHhhhhHHHHHhhc-cccccCCchHHHHHHHHHHHHHHHhhcccCCCCCCchhHHHHHHHHHHHHH
Q 005035 179 EKQTEQTTPPDFRVRQLKDQLIKAKVYL-SLPAMRNNANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLA 257 (717)
Q Consensus 179 ~~~~~~~~~~d~~~~~~~dq~~~a~~y~-~~~~~~~~~~~~~el~~~~~e~~~~~~~a~~d~~~~~~~~~~~~~~~~~~~ 257 (717)
|.+...++|+|++||+|||||||||||+ +|||++||++|+||||+||||+||+||||+.|+|||+++.++|++||++|+
T Consensus 170 w~~e~~~~~~d~~~~~l~Dql~~Ak~y~~~iak~~~~~~l~~el~~~i~e~~~~l~~~~~d~dlp~~~~~~~~~m~~~~~ 249 (629)
T PLN02769 170 WSEEHKEVMKDSIVKRLKDQLFVARAYYPSIAKLPGQEKLTRELKQNIQEHERVLSESITDADLPPFIQKKLEKMEQTIA 249 (629)
T ss_pred ecccccccCcHHHHHHHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHHhhccccccCChhHHHHHHHHHHHHH
Confidence 7777788999999999999999999996 999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCccHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhccCCCccccccccchhhHhhCCcccCCCCCCCCccCCC
Q 005035 258 KGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLPKGLHCLPLRLTTEYYTLNSSQRHFPNQEKLEDPR 337 (717)
Q Consensus 258 ~~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~~~~~~~~l~~~~~pk~~hcl~~rl~~e~~~~~~~~~~~~~~~~~~d~~ 337 (717)
+||++.+||++|++||||||++||||+++|+||++||+||||+|+|||||||+||||+|||+++++++++|++|+|+||+
T Consensus 250 ~ak~~~~dc~~~~~klr~~l~~~E~~~~~~~kq~~~l~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~~~l~d~~ 329 (629)
T PLN02769 250 RAKSCPVDCNNVDRKLRQILDMTEDEAHFHMKQSAFLYQLGVQTMPKSHHCLSMRLTVEYFKSSSLDMEDSNSEKFSDPS 329 (629)
T ss_pred HHHhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccchhhHHHHHhCchhhccCCchhhccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEEeCceEEEEeeechhcchhhhhhhhhhHhhhhhhHHhhhhhhhHHHHHhhhhhHHHHHHHHHhhhhhccccccc
Q 005035 338 LFHYALFSDNVLAAAVVVNSTVTHAKVIYSSLKYALILPLVAKKIGENIRKLAISFLYSFVFLERWFRASINLLSFQRRP 417 (717)
Q Consensus 338 ~~h~~~~sdnvla~~vvvnstv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (717)
+|||||||||||||||||||||+||
T Consensus 330 l~Hy~ifSdNvlAasvvvNStv~na------------------------------------------------------- 354 (629)
T PLN02769 330 LRHYVIFSKNVLAASVVINSTVVHS------------------------------------------------------- 354 (629)
T ss_pred cceEEEEeccceeeeeehhhhhhhc-------------------------------------------------------
Confidence 9999999999999999999999999
Q ss_pred cccccCCCCCCCCCCCCCCccEEEEEEeCcccHHHHHHHHHhCCCCCceEEEEeecccccccCcchHHHhhcccccceeE
Q 005035 418 LLSVDMSNSPCCIEPLQHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMIDY 497 (717)
Q Consensus 418 ~i~sil~ns~~~~e~~kep~~lVFHIVTD~~ny~aMk~WF~~Np~~~A~IeV~nIedf~wln~s~~PVLkqL~s~~ii~~ 497 (717)
++|+++|||||||++||+||++||++||+++|+|||+|+|+|+|.+. .+|+++|+++...+++
T Consensus 355 ----------------~~p~~~VFHiVTD~~n~~am~~WF~~n~~~~a~v~v~n~e~~~~~~~-~~~~~~~l~~~~~~~~ 417 (629)
T PLN02769 355 ----------------RESGNIVFHVLTDAQNYYAMKHWFDRNSYKEAAVQVLNIEDLILKDL-DKFALKQLSLPEEFRV 417 (629)
T ss_pred ----------------cCccceEEEEecChhhHHHHHHHHhcCCCccceEEEeeeeeeeeccc-chHHHHhhccchhhhh
Confidence 99999999999999999999999999999999999999999999764 4799999999988888
Q ss_pred EecccccCCCcccccCCCCCccHhhhHHhhhhhhcCCCCeEEEEecCeeEecCchhhhccCCCCCeeEEeeccccccccc
Q 005035 498 YFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGETFHRF 577 (717)
Q Consensus 498 yF~~~~~~sd~~lk~r~p~yiS~lnylRFfIPeLfPelDKVLYLD~DVIVqgDLseLwdiDL~GkviAAVeDc~~~f~ry 577 (717)
+|..+.... .+.++|+|+|+++|+|||||++||+++||||||+|+||++||++||++||+|+++|||+||...++++
T Consensus 418 ~~~~~~~~~---~~~~~~eyiS~~nh~RfyIPELLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~rl~~~ 494 (629)
T PLN02769 418 SFRSVDNPS---SKQMRTEYLSVFSHSHFLLPEIFKKLKKVVVLDDDVVVQRDLSFLWNLDMGGKVNGAVQFCGVRLGQL 494 (629)
T ss_pred hhccCCCCc---hhccCcccccHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhcCCCCCCeEEEehhhhhhhhhh
Confidence 888765443 35578999999999999999999999999999999999999999999999999999999997655555
Q ss_pred ccccccCCcccccCCCCCCCceeeeeeeeechHHHHhhHHHHHHHHHHhc-c-cccccccCCCCccccccccceeeccCc
Q 005035 578 DRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMN-H-DRQLWKLGTLPPGLITFWKRTYPLDRF 655 (717)
Q Consensus 578 ~~YLNfSnP~i~~~fdp~~cyFNSGVLLIDL~kWRe~nITeky~~w~k~N-~-d~~L~dqGdLp~~Li~F~g~i~~LD~r 655 (717)
..|++ ..+|+++.||||+|||||||++||++++++++++|++.+ . +...|++|+||+++++|+|++++||++
T Consensus 495 ~~yl~------~~~F~~~~CyFNSGVLLINL~~WRk~nITe~~~~~~~~~~~~~~~~~~~~~Lp~lnlvF~g~v~~LD~r 568 (629)
T PLN02769 495 KNYLG------DTNFDTNSCAWMSGLNVIDLDKWRELDVTETYLKLLQKFSKDGEESLRAAALPASLLTFQDLIYPLDDR 568 (629)
T ss_pred hhhhc------ccCCCccccccccCeeEeeHHHHHHhCHHHHHHHHHHHhhhcccccccccCcCHHHHHhcCeEEECCHH
Confidence 55553 246888999999999999999999999999999998765 3 356899999999999999999999999
Q ss_pred cccccCCCCCCCcccccCCCeEEEeeCCCCCcccCCccccHHHHHHHhccCcchhhhccCC
Q 005035 656 WHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNIN 716 (717)
Q Consensus 656 WN~lgLGy~~~is~e~ie~aaIIHYnG~~KPWl~~~~~~Yrd~WwkY~~~d~~flr~Cni~ 716 (717)
||++|+||++.++.+.+++|+||||+|++|||++.++++|+++||+|++++++|+++||||
T Consensus 569 WNv~gLG~~~~i~~~~i~~paIIHYnG~~KPW~e~~i~~yr~~W~kYl~~~~~fl~~Cni~ 629 (629)
T PLN02769 569 WVLSGLGHDYGIDEQAIKKAAVLHYNGNMKPWLELGIPKYKKYWKRFLNRDDRFMDECNVN 629 (629)
T ss_pred HccccccccccccccccCCcEEEEECCCCCCccCCCCChHHHHHHHHhccCChHHhhCCCC
Confidence 9999999998887778899999999999999999999999999999999999999999997
No 6
>PLN02870 Probable galacturonosyltransferase
Probab=100.00 E-value=3.4e-121 Score=1000.99 Aligned_cols=422 Identities=47% Similarity=0.859 Sum_probs=393.7
Q ss_pred hHHHHHHHHHHHHHHHhhcccCCCCCCchhHHHHHHHHHHHHHHhccCCccHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Q 005035 215 ANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFL 294 (717)
Q Consensus 215 ~~~~~el~~~~~e~~~~~~~a~~d~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~~~~~~ 294 (717)
.++++||.+-+.|+ .-+||+.|++||+++.+.++ +||+.++||+++++|||||++++|||++++|+|++|+
T Consensus 89 ~~~~~~~~~~l~~~--~~~~~~~d~~lp~s~~~~~~-------~~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~~~~~~ 159 (533)
T PLN02870 89 ERLVRDFYKILNEV--NTEEIPDGLKLPDSFSQLVS-------DMKNNHYDAKTFAFVLRAMMEKFERELRESKFAELMN 159 (533)
T ss_pred hhhHHHHHHHHHHh--ccccccccccCChhHHHHHH-------HHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37999999888884 57899999999998776666 7788999999999999999999999999999999999
Q ss_pred HHhhhccCCCccccccccchhhHhhCCcccCCCCCCC---CccCCCcceEEEEeCceEEEEeeechhcchhhhhhhhhhH
Q 005035 295 TQLTAKTLPKGLHCLPLRLTTEYYTLNSSQRHFPNQE---KLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKVIYSSLKY 371 (717)
Q Consensus 295 ~~l~~~~~pk~~hcl~~rl~~e~~~~~~~~~~~~~~~---~~~d~~~~h~~~~sdnvla~~vvvnstv~~~~~~~~~~~~ 371 (717)
+||||+|+|||||||+||||+|||+++++++++|++| +|+||++|||||||||||||||||||||+||
T Consensus 160 ~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~e~~~~l~dp~~~Hy~ifSdNvLAasVvvnStv~~a--------- 230 (533)
T PLN02870 160 KHFAASSIPKGIHCLSLRLTDEYSSNAHARKQLPSPELLPVLSDNSYHHFVLSTDNILAASVVVSSTVQSS--------- 230 (533)
T ss_pred HHHHHhhcCCCccccchhhHHHHHhCchhhhcCCcccccccccCCcceeEEEEecceeEEEeeeehhhhcc---------
Confidence 9999999999999999999999999999999999887 9999999999999999999999999999999
Q ss_pred hhhhhhHHhhhhhhhHHHHHhhhhhHHHHHHHHHhhhhhccccccccccccCCCCCCCCCCCCCCccEEEEEEeCcccHH
Q 005035 372 ALILPLVAKKIGENIRKLAISFLYSFVFLERWFRASINLLSFQRRPLLSVDMSNSPCCIEPLQHPSNHVFHIVTDRLNYA 451 (717)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sil~ns~~~~e~~kep~~lVFHIVTD~~ny~ 451 (717)
++|++||||||||++||+
T Consensus 231 --------------------------------------------------------------~~p~~~VFHvvTD~~n~~ 248 (533)
T PLN02870 231 --------------------------------------------------------------LKPEKIVFHVITDKKTYA 248 (533)
T ss_pred --------------------------------------------------------------cCccceEEEEecCccccH
Confidence 999999999999999999
Q ss_pred HHHHHHHhCCCCCceEEEEeecccccccCcchHHHhhcccccceeEEec-ccccC---C-------CcccccCCCCCccH
Q 005035 452 AMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMIDYYFR-AHRAN---S-------DSNLKFRNPKYLSI 520 (717)
Q Consensus 452 aMk~WF~~Np~~~A~IeV~nIedf~wln~s~~PVLkqL~s~~ii~~yF~-~~~~~---s-------d~~lk~r~p~yiS~ 520 (717)
||++||++||+++|+|||+|||+|+||+++|+||++|++++.++++||. .+... + .+++|+|+|+|+|+
T Consensus 249 aM~~WF~~n~~~~a~v~V~~~e~f~wl~~~~~pvl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ylS~ 328 (533)
T PLN02870 249 GMHSWFALNSVSPAIVEVKGVHQFDWLTRENVPVLEAVESHNGIRNYYHGNHIAGANLSETTPRTFASKLQARSPKYISL 328 (533)
T ss_pred HHHHHHhhCCCccceEEEEehhhccccccccchHHHHHhhhHHHHHHhhcccccccccccccchhhhcccccCCccccCH
Confidence 9999999999999999999999999999999999999999988765554 33321 1 24688999999999
Q ss_pred hhhHHhhhhhhcCCCCeEEEEecCeeEecCchhhhccCCCCCeeEEeeccccc-----ccccccccccCCcccccCCCCC
Q 005035 521 LNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGET-----FHRFDRYLNFSNPLISKNFDPR 595 (717)
Q Consensus 521 lnylRFfIPeLfPelDKVLYLD~DVIVqgDLseLwdiDL~GkviAAVeDc~~~-----f~ry~~YLNfSnP~i~~~fdp~ 595 (717)
++|+|||||++||+++||||||+||||++||++||++||+|+++|||+||... .+++..|+||++|.+..+|+++
T Consensus 329 lny~Rl~LPelLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviaAVeDc~~~~~~~~~~~~~~YfNfs~p~i~~~fd~~ 408 (533)
T PLN02870 329 LNHLRIYLPELFPNLDKVVFLDDDVVIQRDLSPLWDIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKNLDPE 408 (533)
T ss_pred HHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhhCCCCCceEEEEccccccchhhhhhhhhhhcccccchhhcccCcc
Confidence 99999999999999999999999999999999999999999999999999642 4677889999999999999999
Q ss_pred CCceeeeeeeeechHHHHhhHHHHHHHHHHhcc--cccccccCCCCccccccccceeeccCccccccCCCCCCCcccccC
Q 005035 596 ACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNH--DRQLWKLGTLPPGLITFWKRTYPLDRFWHVLGLGYNPSVNQRDIE 673 (717)
Q Consensus 596 ~cyFNSGVLLIDL~kWRe~nITeky~~w~k~N~--d~~L~dqGdLp~~Li~F~g~i~~LD~rWN~lgLGy~~~is~e~ie 673 (717)
.||||||||||||++||++++++++++|++.+. +..+|+||+||+++++|+|++++||++||++|+||++....+.++
T Consensus 409 ~cyfNSGVlLINL~~WRe~nITek~~~~l~~n~~~~l~l~DQdaLp~~livf~g~v~~LD~rWN~~gLgy~~~~~~~~i~ 488 (533)
T PLN02870 409 ECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHMLGLGYQSKTNIESVK 488 (533)
T ss_pred cceeeccchhccHHHHHHcChHHHHHHHHHhhhhcCceecccccccHhHHHhcCceEECChHHhcCCCCCcccccccccC
Confidence 999999999999999999999999999998764 347899999999999999999999999999999998776667788
Q ss_pred CCeEEEeeCCCCCcccCCccccHHHHHHHhccCcchhhhccCC
Q 005035 674 RAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNIN 716 (717)
Q Consensus 674 ~aaIIHYnG~~KPWl~~~~~~Yrd~WwkY~~~d~~flr~Cni~ 716 (717)
+|+||||+|++|||++.++++|+++|.+|++++++|+++|||+
T Consensus 489 ~aaIIHY~G~~KPW~~~~~~~yr~~W~kYl~~s~~fl~~Cni~ 531 (533)
T PLN02870 489 KAAVIHYNGQSKPWLEIGFEHLRPFWTKYVNYSNDFIRNCHIL 531 (533)
T ss_pred CcEEEEECCCCCCccccCccchhHHHHHHHccCchHhhhcCCC
Confidence 9999999999999999999999999999999999999999997
No 7
>PLN02867 Probable galacturonosyltransferase
Probab=100.00 E-value=8.2e-121 Score=1000.86 Aligned_cols=421 Identities=41% Similarity=0.774 Sum_probs=390.6
Q ss_pred HHHHHHhhcccCCCCCCchhHHHHHHHHHHHHHHhccCCccHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhccCCC
Q 005035 225 IKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLPK 304 (717)
Q Consensus 225 ~~e~~~~~~~a~~d~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~~~~~~~~l~~~~~pk 304 (717)
.+|++|+|+||++|+++|+.+.++.++||++++++++.++||+++++|||||++++|||++++|+|++|++||||+|+||
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~kl~am~~~~e~~~~~~~~~~~~~~~laa~t~PK 174 (535)
T PLN02867 95 REELTRALVEAKEQDDGGRGTKGSTESFNDLVKEMTSNRQDIKAFAFRTKAMLLKMERKVQSARQRESIYWHLASHGIPK 174 (535)
T ss_pred HHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Confidence 46778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccchhhHhhCCcccCCCCCCC---CccCCCcceEEEEeCceEEEEeeechhcchhhhhhhhhhHhhhhhhHHhh
Q 005035 305 GLHCLPLRLTTEYYTLNSSQRHFPNQE---KLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKVIYSSLKYALILPLVAKK 381 (717)
Q Consensus 305 ~~hcl~~rl~~e~~~~~~~~~~~~~~~---~~~d~~~~h~~~~sdnvla~~vvvnstv~~~~~~~~~~~~~~~~~~~~~~ 381 (717)
|||||+||||+|||+++++++++|++| +|+||++|||||||||||||||||||||+||
T Consensus 175 ~lHCL~mrLt~ey~~~~~~~~~~~~~~~~~~l~d~~~~Hy~ifSdNvLAasVvvnStv~~a------------------- 235 (535)
T PLN02867 175 SLHCLCLKLAEEYAVNAMARSRLPPPESVSRLTDPSFHHVVLLTDNVLAASVVISSTVQNA------------------- 235 (535)
T ss_pred CccccchhhHHHHHhCchhhccCCChhhhhhccCCCcceEEEEecceeEEEeeeehhhhcc-------------------
Confidence 999999999999999999999999887 8999999999999999999999999999999
Q ss_pred hhhhhHHHHHhhhhhHHHHHHHHHhhhhhccccccccccccCCCCCCCCCCCCCCccEEEEEEeCcccHHHHHHHHHhCC
Q 005035 382 IGENIRKLAISFLYSFVFLERWFRASINLLSFQRRPLLSVDMSNSPCCIEPLQHPSNHVFHIVTDRLNYAAMRMWFLANP 461 (717)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sil~ns~~~~e~~kep~~lVFHIVTD~~ny~aMk~WF~~Np 461 (717)
++|++||||||||++||+||++||++||
T Consensus 236 ----------------------------------------------------~~p~~~VfHvvTD~~ny~aM~~WF~~n~ 263 (535)
T PLN02867 236 ----------------------------------------------------ANPEKLVFHIVTDKKTYTPMHAWFAINS 263 (535)
T ss_pred ----------------------------------------------------cCccceEEEEecCccccHHHHHHHhhCC
Confidence 9999999999999999999999999999
Q ss_pred CCCceEEEEeecccccccCcchHHHhhcccccce-eEEecccc-------cCCCcccccCCCCCccHhhhHHhhhhhhcC
Q 005035 462 PGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMI-DYYFRAHR-------ANSDSNLKFRNPKYLSILNHLRFYLPEVFP 533 (717)
Q Consensus 462 ~~~A~IeV~nIedf~wln~s~~PVLkqL~s~~ii-~~yF~~~~-------~~sd~~lk~r~p~yiS~lnylRFfIPeLfP 533 (717)
+++|+|||+|||+|+|++++++||+++++++.++ .+||+... ....+++++|+|+|+|+++|+||+||++||
T Consensus 264 ~~~a~v~V~~~~~f~wl~~~~~~v~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pkylS~lnYlRflIPeLLP 343 (535)
T PLN02867 264 IKSAVVEVKGLHQYDWSQEVNVGVKEMLEIHRLIWSHYYQNLKESDFQFEGTHKRSLEALSPSCLSLLNHLRIYIPELFP 343 (535)
T ss_pred CccceEEEEeehhccccccccccHHHHHHHhhhhhhhhhccccccccccccccccchhhcChhhhhHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999987765 23333211 122456888999999999999999999999
Q ss_pred CCCeEEEEecCeeEecCchhhhccCCCCCeeEEeecc--ccc---ccccccccccCCcccccCCCCCCCceeeeeeeeec
Q 005035 534 RLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETC--GET---FHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDL 608 (717)
Q Consensus 534 elDKVLYLD~DVIVqgDLseLwdiDL~GkviAAVeDc--~~~---f~ry~~YLNfSnP~i~~~fdp~~cyFNSGVLLIDL 608 (717)
+++||||||+||||++||++||++||+|+++|||.|+ ... .+++.+|+||++|.+..+|+++.||||||||||||
T Consensus 344 ~LdKVLYLD~DVVVqgDLseLwdiDL~gkviaAV~D~~c~~~~~~~~~~~~YlNfsnp~i~~~~~p~~cYFNSGVmLINL 423 (535)
T PLN02867 344 DLNKIVFLDDDVVVQHDLSSLWELDLNGKVVGAVVDSWCGDNCCPGRKYKDYLNFSHPLISSNLDQERCAWLYGMNVFDL 423 (535)
T ss_pred ccCeEEEecCCEEEcCchHHHHhCcCCCCeEEEEeccccccccccchhhhhhccccchhhhccCCCCCcceecceeeeeH
Confidence 9999999999999999999999999999999999874 321 24678899999999888999999999999999999
Q ss_pred hHHHHhhHHHHHHHHHHhccc--ccccccCCCCccccccccceeeccCccccccCCCCCCC-cccccCCCeEEEeeCCCC
Q 005035 609 DEWRRQNITDVYHTWQKMNHD--RQLWKLGTLPPGLITFWKRTYPLDRFWHVLGLGYNPSV-NQRDIERAAVIHYNGNMK 685 (717)
Q Consensus 609 ~kWRe~nITeky~~w~k~N~d--~~L~dqGdLp~~Li~F~g~i~~LD~rWN~lgLGy~~~i-s~e~ie~aaIIHYnG~~K 685 (717)
++||++++++++++|++.+.+ ..+|+||+||++|++|+|++++||++||+.|+||++.. ..+.+++|+||||+|++|
T Consensus 424 ~~WRe~nITek~~~~Le~n~~~~~~l~dqd~LN~~LlvF~g~v~~LD~rWNv~gLgy~~~~~~~~~i~~paIIHYnG~~K 503 (535)
T PLN02867 424 KAWRRTNITEAYHKWLKLSLNSGLQLWQPGALPPALLAFKGHVHPIDPSWHVAGLGSRPPEVPREILESAAVLHFSGPAK 503 (535)
T ss_pred HHHHHhcHHHHHHHHHHhchhcccccccccccchHHHHhcCcEEECChhhcccCCCcccccchhhhcCCcEEEEECCCCC
Confidence 999999999999999998754 46899999999999999999999999999999998642 334568999999999999
Q ss_pred CcccCCccccHHHHHHHhccCcchhhhccCC
Q 005035 686 PWLEINIPKYRNYWTKHVDYDQLYLRECNIN 716 (717)
Q Consensus 686 PWl~~~~~~Yrd~WwkY~~~d~~flr~Cni~ 716 (717)
||++.++++||++|.+|++++++|+|+|||.
T Consensus 504 PW~e~~~~~yR~~W~kyl~~~~~fl~~cni~ 534 (535)
T PLN02867 504 PWLEIGFPEVRSLWYRHVNFSDKFIRKCRIM 534 (535)
T ss_pred cccccCCCchhHHHHHhcCccchHHHhcccC
Confidence 9999999999999999999999999999995
No 8
>PLN02659 Probable galacturonosyltransferase
Probab=100.00 E-value=2.2e-119 Score=986.94 Aligned_cols=424 Identities=44% Similarity=0.827 Sum_probs=390.2
Q ss_pred CchHHHHHHHHHHHH-HHHhhcccCCCCCCchhHHHHHHHHHHHHHHhccCCccHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 005035 213 NNANFVRELRLRIKE-VQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQT 291 (717)
Q Consensus 213 ~~~~~~~el~~~~~e-~~~~~~~a~~d~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~~~ 291 (717)
...++++||.+-+.| +. =.|...|.++|.+ +++++.++++.++||.+|++||||||++|||+++++|+|+
T Consensus 87 ~~~~~~~~~~~~~~~~~~--~~e~~~~~~~~~~-------~~~~~~~~~~~~~d~~~~~~klr~~l~~~E~~~~~~k~~~ 157 (534)
T PLN02659 87 DSANVPEVMYQVLEQPLS--NDELKGRSDIPQT-------LEEFMDEVKNSRSDARAFALKLREMVTLLEQRTRTAKIQE 157 (534)
T ss_pred cccccHHHHHHHHHhhhc--ccccCCccccchH-------HHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334677777776666 32 2366778888875 7788888889999999999999999999999999999999
Q ss_pred HHHHHhhhccCCCccccccccchhhHhhCCcccCCCCCCC---CccCCCcceEEEEeCceEEEEeeechhcchhhhhhhh
Q 005035 292 LFLTQLTAKTLPKGLHCLPLRLTTEYYTLNSSQRHFPNQE---KLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKVIYSS 368 (717)
Q Consensus 292 ~~~~~l~~~~~pk~~hcl~~rl~~e~~~~~~~~~~~~~~~---~~~d~~~~h~~~~sdnvla~~vvvnstv~~~~~~~~~ 368 (717)
.++.||||+|+|||||||+||||+|||+++++++++|++| +|+||++|||||||||||||||||||||+||
T Consensus 158 ~~~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~~~~~~l~d~~l~Hy~ifSdNvLAasVVvnStv~~a------ 231 (534)
T PLN02659 158 YLYRHVASSSIPKQLHCLALRLANEHSTNAAARLQLPLAELVPALVDNSYFHFVLASDNILAASVVANSLVQNA------ 231 (534)
T ss_pred HHHHHHHhhhCCCCccccchhhHHHHHhCchhhhccCCcccccccCCCCcceEEEEecceeEEEeeeehhhhcc------
Confidence 9999999999999999999999999999999999999888 7999999999999999999999999999999
Q ss_pred hhHhhhhhhHHhhhhhhhHHHHHhhhhhHHHHHHHHHhhhhhccccccccccccCCCCCCCCCCCCCCccEEEEEEeCcc
Q 005035 369 LKYALILPLVAKKIGENIRKLAISFLYSFVFLERWFRASINLLSFQRRPLLSVDMSNSPCCIEPLQHPSNHVFHIVTDRL 448 (717)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sil~ns~~~~e~~kep~~lVFHIVTD~~ 448 (717)
++|++||||||||++
T Consensus 232 -----------------------------------------------------------------~~p~~~VFHivTD~~ 246 (534)
T PLN02659 232 -----------------------------------------------------------------LRPHKFVLHIITDRK 246 (534)
T ss_pred -----------------------------------------------------------------cCccceEEEEecCcc
Confidence 999999999999999
Q ss_pred cHHHHHHHHHhCCCCCceEEEEeecccccccCcchHHHhhcccccceeEEeccccc----CC-------CcccccCCCCC
Q 005035 449 NYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMIDYYFRAHRA----NS-------DSNLKFRNPKY 517 (717)
Q Consensus 449 ny~aMk~WF~~Np~~~A~IeV~nIedf~wln~s~~PVLkqL~s~~ii~~yF~~~~~----~s-------d~~lk~r~p~y 517 (717)
||+||++||++||+++|+|||+|||+|+||+++|+||++|++++.++++||+.+.. ++ .+++++|+|+|
T Consensus 247 ny~aM~~WF~~n~~~~a~v~V~~~e~f~wl~~~~~pvl~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~y 326 (534)
T PLN02659 247 TYSPMQAWFSLHPLSPAIIEVKALHHFDWFAKGKVPVLEAMEKDQRVRSQFRGGSSAIVANNTEKPHVIAAKLQALSPKY 326 (534)
T ss_pred ccHHHHHHHhhCCCccceEEEEeehhcccccccccHHHHHHhhhhhhhhhhcccccccccccccCccccccccccCCccc
Confidence 99999999999999999999999999999999999999999999999999875431 11 24577899999
Q ss_pred ccHhhhHHhhhhhhcCCCCeEEEEecCeeEecCchhhhccCCCCCeeEEeeccccc--c---cccccccccCCcccccCC
Q 005035 518 LSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGET--F---HRFDRYLNFSNPLISKNF 592 (717)
Q Consensus 518 iS~lnylRFfIPeLfPelDKVLYLD~DVIVqgDLseLwdiDL~GkviAAVeDc~~~--f---~ry~~YLNfSnP~i~~~f 592 (717)
+|+++|+||+||++||+++||||||+||||++||++||++||+|+++|||+||... + +++..|++|++|.+...|
T Consensus 327 lS~~nY~RL~IPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkv~AAVeDc~~~d~~~~~~~~~~yL~~s~p~i~~yF 406 (534)
T PLN02659 327 NSVMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCRGEDKFVMSKKLKSYLNFSHPLIAKNF 406 (534)
T ss_pred eeHHHHHHHHHHHHhhhcCeEEEeeCCEEEcCchHHHHhCCCCCcEEEEeeccccccchhhhHHHHHhhcccchhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999632 2 567889999999998899
Q ss_pred CCCCCceeeeeeeeechHHHHhhHHHHHHHHHHhcc--cccccccCCCCccccccccceeeccCccccccCCCCCCCccc
Q 005035 593 DPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNH--DRQLWKLGTLPPGLITFWKRTYPLDRFWHVLGLGYNPSVNQR 670 (717)
Q Consensus 593 dp~~cyFNSGVLLIDL~kWRe~nITeky~~w~k~N~--d~~L~dqGdLp~~Li~F~g~i~~LD~rWN~lgLGy~~~is~e 670 (717)
+++.||||+|||||||++||++++++++++|++.+. +..+|+||+||+++++|+|++++||++||++++||++....+
T Consensus 407 n~~~cYfNsGVlLINLk~WRe~nITek~l~~l~~n~~~~l~l~DQdaLp~~LivF~g~v~~LD~rWN~~gLg~~~~~~~~ 486 (534)
T PLN02659 407 DPNECAWAYGMNIFDLEAWRKTNISSTYHHWLEENLKSDLSLWQLGTLPPGLIAFHGHVHVIDPFWHMLGLGYQENTSLA 486 (534)
T ss_pred CccccceecceeEeeHHHHHhcChHHHHHHHHHhcccccccccccccchHHHHHhcCCEEECChhheecCCccccccccc
Confidence 999999999999999999999999999999998764 356799999999999999999999999999999998766666
Q ss_pred ccCCCeEEEeeCCCCCcccCCccccHHHHHHHhccCcchhhhccCC
Q 005035 671 DIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNIN 716 (717)
Q Consensus 671 ~ie~aaIIHYnG~~KPWl~~~~~~Yrd~WwkY~~~d~~flr~Cni~ 716 (717)
.+++|+||||+|++|||++.++++||++|.+|++++++|+|+|||+
T Consensus 487 ~i~~paIIHYnG~~KPW~~~~~~~yr~~W~kYl~~s~~fl~~Cni~ 532 (534)
T PLN02659 487 DAESAGVVHFNGRAKPWLDIAFPQLRPLWAKYIDSSDKFIKSCHIR 532 (534)
T ss_pred ccCCcEEEEECCCCCccccccCCcchhHHHHHhccCCHHHHhcCCC
Confidence 7889999999999999999999999999999999999999999996
No 9
>PLN02523 galacturonosyltransferase
Probab=100.00 E-value=3e-117 Score=972.63 Aligned_cols=458 Identities=50% Similarity=0.909 Sum_probs=415.1
Q ss_pred chhHHHHhhhhHHHHHhhcccccc---CC--chHHHHHHHHHHHHHHH-----hh-ccc--CCC----CCCchhHHHHHH
Q 005035 188 PDFRVRQLKDQLIKAKVYLSLPAM---RN--NANFVRELRLRIKEVQR-----AL-GDA--TKD----SDLPRIANDRLK 250 (717)
Q Consensus 188 ~d~~~~~~~dq~~~a~~y~~~~~~---~~--~~~~~~el~~~~~e~~~-----~~-~~a--~~d----~~~~~~~~~~~~ 250 (717)
-|.+.||-.|-..++-||.+.|.- .+ ..+.-.||..+.-++.. ++ ++. +.| .+||+++.+++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 159 (559)
T PLN02523 80 LDQIRKQADDHRTLVNAYAAYARKLKLDNSKLLRLFADLSRNFTDLISKPSYRALLSSDGSAIDEDVLRQFEKEVKERVK 159 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhHHHHhhcCccccccccccCCcCchHHHhhcchhHHHHHH
Confidence 478889999999999999877631 11 12222345555444331 11 111 011 358999999999
Q ss_pred HHHHHHHHhccCCccHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhccCCCccccccccchhhHhhCCcccC--CCC
Q 005035 251 AMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLPKGLHCLPLRLTTEYYTLNSSQR--HFP 328 (717)
Q Consensus 251 ~~~~~~~~~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~~~~~~~~l~~~~~pk~~hcl~~rl~~e~~~~~~~~~--~~~ 328 (717)
+||++|++||+ .+||.++++|||+|++++|||++++|+|++|++||||+|+|||||||+||||+|||++++.++ +.|
T Consensus 160 ~~~~~~~~a~~-~~d~~~~~~kl~~~~~~~e~~~~~~~~q~~~~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~ 238 (559)
T PLN02523 160 VARQMIAESKE-SFDNQLKIQKLKDTIFAVNEQLTKAKKNGAFASLIAAKSIPKSLHCLAMRLMEERIAHPEKYKDEGKP 238 (559)
T ss_pred HHHHHHHHHHh-hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHhHHHHHhChHhhhccCCC
Confidence 99999999998 677889999999999999999999999999999999999999999999999999999988744 467
Q ss_pred CCCCccCCCcceEEEEeCceEEEEeeechhcchhhhhhhhhhHhhhhhhHHhhhhhhhHHHHHhhhhhHHHHHHHHHhhh
Q 005035 329 NQEKLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKVIYSSLKYALILPLVAKKIGENIRKLAISFLYSFVFLERWFRASI 408 (717)
Q Consensus 329 ~~~~~~d~~~~h~~~~sdnvla~~vvvnstv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (717)
++++|+||++|||||||||||||||||||||+||
T Consensus 239 ~~~~l~dp~l~Hy~ifSdNvlAAsVvInStv~Ns---------------------------------------------- 272 (559)
T PLN02523 239 PPPELEDPSLYHYAIFSDNVIAASVVVNSAVKNA---------------------------------------------- 272 (559)
T ss_pred cchhccCCCcceEEEecCcchhhhhhHHHHHHcc----------------------------------------------
Confidence 7799999999999999999999999999999999
Q ss_pred hhccccccccccccCCCCCCCCCCCCCCccEEEEEEeCcccHHHHHHHHHhCCCCCceEEEEeecccccccCcchHHHhh
Q 005035 409 NLLSFQRRPLLSVDMSNSPCCIEPLQHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQ 488 (717)
Q Consensus 409 ~~~~~~~~~~i~sil~ns~~~~e~~kep~~lVFHIVTD~~ny~aMk~WF~~Np~~~A~IeV~nIedf~wln~s~~PVLkq 488 (717)
++|+++|||||||++||++|++||.+|++++++|+|++||+|+|++.+++||+++
T Consensus 273 -------------------------~~p~~~VFHIVTD~ln~~amk~Wf~~n~~~~a~I~V~~Iedf~~ln~~~~pvlk~ 327 (559)
T PLN02523 273 -------------------------KEPWKHVFHVVTDRMNLAAMKVMFKMRDLNGAHVEVKAVEDYKFLNSSYVPVLRQ 327 (559)
T ss_pred -------------------------CCCcceEEEEEeCCCCHHHHHHHHhhCCCCCcEEEEEEeehhhhcccccchHHHh
Confidence 9999999999999999999999999999999999999999999999999999999
Q ss_pred cccccceeEEecccccC---CCcccccCCCCCccHhhhHHhhhhhhcCCCCeEEEEecCeeEecCchhhhccCCCCCeeE
Q 005035 489 LNSQSMIDYYFRAHRAN---SDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNG 565 (717)
Q Consensus 489 L~s~~ii~~yF~~~~~~---sd~~lk~r~p~yiS~lnylRFfIPeLfPelDKVLYLD~DVIVqgDLseLwdiDL~GkviA 565 (717)
++++.++.+||.++..+ ...++++|+|+|+|+++|+|||||++||+++||||||+||||++||++||++||+|+++|
T Consensus 328 l~s~~~~~~~f~~~~~~~~~~~~~~k~~~p~ylS~~ny~Rf~IPeLLP~ldKVLYLD~DVVVq~DLseLw~iDL~gkv~a 407 (559)
T PLN02523 328 LESANLQKFYFENKLENATKDSSNMKFRNPKYLSMLNHLRFYLPEMYPKLHRILFLDDDVVVQKDLTGLWKIDMDGKVNG 407 (559)
T ss_pred hhhhhhhhhhccccccccccccccccccCcchhhHHHHHHHHHHHHhcccCeEEEEeCCEEecCCHHHHHhCcCCCceEE
Confidence 99999999999875433 235788999999999999999999999999999999999999999999999999999999
Q ss_pred EeecccccccccccccccCCcccccCCCCCCCceeeeeeeeechHHHHhhHHHHHHHHHHhcccccccccCCCCcccccc
Q 005035 566 AVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITF 645 (717)
Q Consensus 566 AVeDc~~~f~ry~~YLNfSnP~i~~~fdp~~cyFNSGVLLIDL~kWRe~nITeky~~w~k~N~d~~L~dqGdLp~~Li~F 645 (717)
||+||...+++|..+++|++|.+...|+++.||||+|||||||++||++++|++++.|++.+.+..+|+||+||+++++|
T Consensus 408 AVeDc~~~~~r~~~~ln~s~p~i~~yFNs~aC~wnsGVmlINL~~WRe~nITek~~~w~~ln~~~~l~DqdaLpp~LivF 487 (559)
T PLN02523 408 AVETCFGSFHRYAQYLNFSHPLIKEKFNPKACAWAYGMNIFDLDAWRREKCTEQYHYWQNLNENRTLWKLGTLPPGLITF 487 (559)
T ss_pred EehhhhhHHHHHHHhhcccchhhhhCcCCCcccccCCcEEEeHHHHHHhchHHHHHHHHHhccccccccccccchHHHHh
Confidence 99999766788889999999998889999999999999999999999999999999999888888899999999999999
Q ss_pred ccceeeccCccccccCCCCCCCcccccCCCeEEEeeCCCCCcccCCccccHHHHHHHhccCcchhhhccCCC
Q 005035 646 WKRTYPLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYLRECNINP 717 (717)
Q Consensus 646 ~g~i~~LD~rWN~lgLGy~~~is~e~ie~aaIIHYnG~~KPWl~~~~~~Yrd~WwkY~~~d~~flr~Cni~~ 717 (717)
+|++++||++||++|+||++.++.+.+++|+||||+|++|||++.++++|+++|++|++++++|+++|||+|
T Consensus 488 ~gri~~LD~rWNvlglGy~~~i~~~~i~~paIIHYnG~~KPWle~~i~~yr~~W~kYl~~~~~fl~~Cn~~~ 559 (559)
T PLN02523 488 YSTTKPLDKSWHVLGLGYNPSISMDEIRNAAVIHFNGNMKPWLDIAMNQFKPLWTKYVDYDMEFVQACNFGL 559 (559)
T ss_pred cCceEecCchhhccCCccCCCccccccCCCEEEEECCCCCccccCCCCcchHHHHHHHccCCHHHHhCCCCC
Confidence 999999999999999999998888889999999999999999999999999999999999999999999997
No 10
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=100.00 E-value=4.2e-57 Score=464.21 Aligned_cols=255 Identities=56% Similarity=0.996 Sum_probs=232.9
Q ss_pred ceEEEEeCceEEEEeeechhcchhhhhhhhhhHhhhhhhHHhhhhhhhHHHHHhhhhhHHHHHHHHHhhhhhcccccccc
Q 005035 339 FHYALFSDNVLAAAVVVNSTVTHAKVIYSSLKYALILPLVAKKIGENIRKLAISFLYSFVFLERWFRASINLLSFQRRPL 418 (717)
Q Consensus 339 ~h~~~~sdnvla~~vvvnstv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (717)
+|+|++|||++|+|||++|++.|+
T Consensus 1 ~hiv~~~Dn~l~~~v~i~S~l~nn-------------------------------------------------------- 24 (257)
T cd06429 1 IHVVIFSDNRLAAAVVINSSISNN-------------------------------------------------------- 24 (257)
T ss_pred CCEEEEecchhHHHHHHHHHHHhC--------------------------------------------------------
Confidence 699999999999999999999999
Q ss_pred ccccCCCCCCCCCCCCCCccEEEEEEeCcccHHHHHHHHHhCCCCCceEEEEeecccccccCcchHHHhhcccccceeEE
Q 005035 419 LSVDMSNSPCCIEPLQHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMIDYY 498 (717)
Q Consensus 419 i~sil~ns~~~~e~~kep~~lVFHIVTD~~ny~aMk~WF~~Np~~~A~IeV~nIedf~wln~s~~PVLkqL~s~~ii~~y 498 (717)
++|.+++|||+||++++++|+.||..++..+++|+|+.++++.|++....+.++|++++.
T Consensus 25 ---------------~~~~~~~fhvvtd~~s~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~----- 84 (257)
T cd06429 25 ---------------KDPSNLVFHIVTDNQNYGAMRSWFDLNPLKIATVKVLNFDDFKLLGKVKVDSLMQLESEA----- 84 (257)
T ss_pred ---------------CCCCceEEEEecCccCHHHHHHHHHhcCCCCceEEEEEeCcHHhhcccccchhhhhhccc-----
Confidence 899999999999999999999999999999999999999999998877777888988762
Q ss_pred ecccccCCCcccccCCCCCccHhhhHHhhhhhhcCCCCeEEEEecCeeEecCchhhhccCCCCCeeEEeecccccccccc
Q 005035 499 FRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGETFHRFD 578 (717)
Q Consensus 499 F~~~~~~sd~~lk~r~p~yiS~lnylRFfIPeLfPelDKVLYLD~DVIVqgDLseLwdiDL~GkviAAVeDc~~~f~ry~ 578 (717)
..+.++.++++++|.++|+||+||++||+++||||||+|+||++||++||++||+|+++|||+|
T Consensus 85 -------~~~~~~~~~~~~~s~~~y~Rl~ip~llp~~~kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav~d--------- 148 (257)
T cd06429 85 -------DTSNLKQRKPEYISLLNFARFYLPELFPKLEKVIYLDDDVVVQKDLTELWNTDLGGGVAGAVET--------- 148 (257)
T ss_pred -------cccccccCCccccCHHHHHHHHHHHHhhhhCeEEEEeCCEEEeCCHHHHhhCCCCCCEEEEEhh---------
Confidence 2234566778999999999999999999999999999999999999999999999999999976
Q ss_pred cccccCCcccccCCCCCCCceeeeeeeeechHHHHhhHHHHHHHHHHhcccc--cccccCCCCccccccccceeeccCcc
Q 005035 579 RYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDR--QLWKLGTLPPGLITFWKRTYPLDRFW 656 (717)
Q Consensus 579 ~YLNfSnP~i~~~fdp~~cyFNSGVLLIDL~kWRe~nITeky~~w~k~N~d~--~L~dqGdLp~~Li~F~g~i~~LD~rW 656 (717)
||||||||||+++||++++++++++|++.+.++ .+|++|+||+++++|+|++..||++|
T Consensus 149 -------------------yfNsGV~linl~~wr~~~i~~~~~~~~~~~~~~~~~~~~~~dqd~ln~~~~~~~~~L~~~w 209 (257)
T cd06429 149 -------------------SWNPGVNVVNLTEWRRQNVTETYEKWMELNQEEEVTLWKLITLPPGLIVFYGLTSPLDPSW 209 (257)
T ss_pred -------------------hcccceEEEeHHHHHhccHHHHHHHHHHHhhhcccchhhcCCccHHHHHccCeeEECChHH
Confidence 689999999999999999999999999876543 56889999999999999999999999
Q ss_pred ccccCCCCCCCcccccCCCeEEEeeCCCCCcccCCccccHHHHHHHhc
Q 005035 657 HVLGLGYNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVD 704 (717)
Q Consensus 657 N~lgLGy~~~is~e~ie~aaIIHYnG~~KPWl~~~~~~Yrd~WwkY~~ 704 (717)
|++++||+.....+.+++|+||||+|+.|||...+.++|+++||+|++
T Consensus 210 N~~~l~~~~~~~~~~~~~~~IIHy~G~~KPW~~~~~~~~~~~w~~yl~ 257 (257)
T cd06429 210 HVRGLGYNYGIRPQDIKAAAVLHFNGNMKPWLRTAIPSYKELWEKYLS 257 (257)
T ss_pred cccCCcccccccccccCCcEEEEECCCCCCcCCCCCChHHHHHHHHhC
Confidence 999888876544455679999999999999999988999999999974
No 11
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=100.00 E-value=1.1e-36 Score=316.47 Aligned_cols=248 Identities=23% Similarity=0.315 Sum_probs=177.2
Q ss_pred ccccccCCCCCCCCCCCCCCccEEEEEEeCcccHHHHHHHHHhCCCCCceEEEEeecccccccCcchHHHhhccccccee
Q 005035 417 PLLSVDMSNSPCCIEPLQHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMID 496 (717)
Q Consensus 417 ~~i~sil~ns~~~~e~~kep~~lVFHIVTD~~ny~aMk~WF~~Np~~~A~IeV~nIedf~wln~s~~PVLkqL~s~~ii~ 496 (717)
.+|.|||.|+ . ..+.|||++|+.+.+.++.+...-...++.|.+..++++. +.+. .+
T Consensus 18 ~~i~Sil~n~-------~--~~~~fhii~d~~s~~~~~~l~~~~~~~~~~i~f~~i~~~~---~~~~----~~------- 74 (280)
T cd06431 18 TLVKSVLFYR-------R--NPLHFHLITDEIARRILATLFQTWMVPAVEVSFYNAEELK---SRVS----WI------- 74 (280)
T ss_pred HHHHHHHHcC-------C--CCEEEEEEECCcCHHHHHHHHHhccccCcEEEEEEhHHhh---hhhc----cC-------
Confidence 4688999997 3 4699999999999888877776555557888887775431 0000 00
Q ss_pred EEecccccCCCcccccCCCCCccH-hhhHHhhhhhhcC-CCCeEEEEecCeeEecCchhhhcc--CCCC-CeeEEeeccc
Q 005035 497 YYFRAHRANSDSNLKFRNPKYLSI-LNHLRFYLPEVFP-RLNKVLFLDDDVVVQKDLSGLWSI--DLKG-KVNGAVETCG 571 (717)
Q Consensus 497 ~yF~~~~~~sd~~lk~r~p~yiS~-lnylRFfIPeLfP-elDKVLYLD~DVIVqgDLseLwdi--DL~G-kviAAVeDc~ 571 (717)
...++|. .+|+||+||++|| +++||||||+|+||++||++||++ |+.| +++|||+|..
T Consensus 75 -----------------~~~~~s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~~~ 137 (280)
T cd06431 75 -----------------PNKHYSGIYGLMKLVLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQS 137 (280)
T ss_pred -----------------cccchhhHHHHHHHHHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEEEeccch
Confidence 0124454 4889999999999 499999999999999999999998 6765 4777777653
Q ss_pred cccccccccc-ccCCcccccCCCCCCCceeeeeeeeechHHHHhhHHHHHHHHHHhccc-ccccccCCCCccccccccc-
Q 005035 572 ETFHRFDRYL-NFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHD-RQLWKLGTLPPGLITFWKR- 648 (717)
Q Consensus 572 ~~f~ry~~YL-NfSnP~i~~~fdp~~cyFNSGVLLIDL~kWRe~nITeky~~w~k~N~d-~~L~dqGdLp~~Li~F~g~- 648 (717)
..+ .... ....| +.....|||||||||||++||++++++++..+.+.+.. ......+||+..+.+|.++
T Consensus 138 ~~~---~~~~~~~~~~-----~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDiLN~v~~~~~ 209 (280)
T cd06431 138 DWY---LGNLWKNHRP-----WPALGRGFNTGVILLDLDKLRKMKWESMWRLTAERELMSMLSTSLADQDIFNAVIKQNP 209 (280)
T ss_pred hhh---hhhhhhccCC-----CcccccceeeeeeeeeHHHHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHHHHHHHcCCc
Confidence 211 1100 00011 11123599999999999999999999998766543311 1112346666677889999
Q ss_pred --eeeccCccccccCCCCC--CCcccccCCCeEEEeeCCCCCcccCCc-cccHHHHHHHhccCcchhhhc
Q 005035 649 --TYPLDRFWHVLGLGYNP--SVNQRDIERAAVIHYNGNMKPWLEINI-PKYRNYWTKHVDYDQLYLREC 713 (717)
Q Consensus 649 --i~~LD~rWN~lgLGy~~--~is~e~ie~aaIIHYnG~~KPWl~~~~-~~Yrd~WwkY~~~d~~flr~C 713 (717)
++.||++||++.. ... .......++|+||||+|+.|||...+. +.||++|.+|.+++++-+|..
T Consensus 210 ~~~~~L~~~wN~~~~-~~~~~~~~~~~~~~p~IIHf~g~~KPW~~~~~~~~~~~~~~~~~~~~~~~l~~~ 278 (280)
T cd06431 210 FLVYQLPCAWNVQLS-DHTRSEQCYRDVSDLKVIHWNSPKKLRVKNKHVEFFRNLYLTFLEYDGNLLRRE 278 (280)
T ss_pred ceeEECCCccccccC-ccchHhHhhcCcCCCEEEEeCCCCCCCCcCCCChHHHHHHHHHHhcCchhhhhh
Confidence 8999999999842 221 111122468999999999999998765 899999999999998888753
No 12
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=100.00 E-value=3.2e-36 Score=319.58 Aligned_cols=245 Identities=18% Similarity=0.222 Sum_probs=170.5
Q ss_pred ccccccCCCCCCCCCCCCCCccEEEEEEeCcccHHHHHHHHHhCCCCCceEEEEeecccccccCcchHHHhhccccccee
Q 005035 417 PLLSVDMSNSPCCIEPLQHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMID 496 (717)
Q Consensus 417 ~~i~sil~ns~~~~e~~kep~~lVFHIVTD~~ny~aMk~WF~~Np~~~A~IeV~nIedf~wln~s~~PVLkqL~s~~ii~ 496 (717)
.+|+||+.|. .+ ..+.|||++|+++-+.++..-..-...+..|++.-++.- + ++.+
T Consensus 42 vsi~Sil~nn-------~~-~~~~f~Il~~~is~e~~~~l~~l~~~~~~~i~~~~id~~-~--------~~~~------- 97 (334)
T PRK15171 42 VSIASVLLNN-------PD-KSLVFHVFTDYISDADKQRFSALAKQYNTRINIYLINCE-R--------LKSL------- 97 (334)
T ss_pred HHHHHHHHhC-------CC-CCEEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEeCHH-H--------HhCC-------
Confidence 4678898875 33 369999999998877665443332222456666544311 0 1111
Q ss_pred EEecccccCCCcccccCCCCCccHhhhHHhhhhhhcCC-CCeEEEEecCeeEecCchhhhccCCCCCeeEEe-ecccccc
Q 005035 497 YYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPR-LNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAV-ETCGETF 574 (717)
Q Consensus 497 ~yF~~~~~~sd~~lk~r~p~yiS~lnylRFfIPeLfPe-lDKVLYLD~DVIVqgDLseLwdiDL~GkviAAV-eDc~~~f 574 (717)
....++|.++|+||+||++||+ ++||||||+|+||++||++||++|++|+.+||| .|+...+
T Consensus 98 ----------------~~~~~~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aav~~d~~~~~ 161 (334)
T PRK15171 98 ----------------PSTKNWTYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVVAEGDAEW 161 (334)
T ss_pred ----------------cccCcCCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEEEEeccchhH
Confidence 1134789999999999999995 999999999999999999999999996666665 4543211
Q ss_pred -cccccccccCCcccccCCCCCCCceeeeeeeeechHHHHhhHHHHHHHHHHhcccccccccCCCCccccccccceeecc
Q 005035 575 -HRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKRTYPLD 653 (717)
Q Consensus 575 -~ry~~YLNfSnP~i~~~fdp~~cyFNSGVLLIDL~kWRe~nITeky~~w~k~N~d~~L~dqGdLp~~Li~F~g~i~~LD 653 (717)
......++. | ++ ...|||||||||||++||++++++++++++..+........+||+..+.+|.|++..||
T Consensus 162 ~~~~~~~l~~--~----~~--~~~YFNsGVlliNl~~wRe~~i~~k~~~~l~~~~~~~~~~~~DQDiLN~~~~~~~~~L~ 233 (334)
T PRK15171 162 WSKRAQSLQT--P----GL--ASGYFNSGFLLINIPAWAQENISAKAIEMLADPEIVSRITHLDQDVLNILLAGKVKFID 233 (334)
T ss_pred HHHHHHhcCC--c----cc--cccceecceEEEcHHHHHHhhHHHHHHHHHhccccccceeecChhHHHHHHcCCeEECC
Confidence 110111110 0 11 24699999999999999999999999999875421111223556666688999999999
Q ss_pred Ccccccc-CCCCCC--CcccccCCCeEEEeeCCCCCcccCCccccHHHHHHHhccCcchh
Q 005035 654 RFWHVLG-LGYNPS--VNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYDQLYL 710 (717)
Q Consensus 654 ~rWN~lg-LGy~~~--is~e~ie~aaIIHYnG~~KPWl~~~~~~Yrd~WwkY~~~d~~fl 710 (717)
.+||++. ..+... .......+|+||||+|+.|||...+.++++++||+|... .||-
T Consensus 234 ~~wN~~~~~~~~~~~~~~~~~~~~p~IIHy~G~~KPW~~~~~~~~~~~f~~~~~~-spw~ 292 (334)
T PRK15171 234 AKYNTQFSLNYELKDSVINPVNDETVFIHYIGPTKPWHSWADYPVSQYFLKAKEA-SPWK 292 (334)
T ss_pred HhhCCccchhHHHHhcccccccCCCEEEEECCCCCCCCCCCCCchHHHHHHHHhc-CCCC
Confidence 9999873 111110 001123579999999999999988888899999999965 5554
No 13
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=100.00 E-value=6e-35 Score=294.26 Aligned_cols=223 Identities=20% Similarity=0.272 Sum_probs=163.7
Q ss_pred ccccccCCCCCCCCCCCCCCccEEEEEEeCcccHHHHHHHHHhCCCCCceEEEEeecccccccCcchHHHhhccccccee
Q 005035 417 PLLSVDMSNSPCCIEPLQHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMID 496 (717)
Q Consensus 417 ~~i~sil~ns~~~~e~~kep~~lVFHIVTD~~ny~aMk~WF~~Np~~~A~IeV~nIedf~wln~s~~PVLkqL~s~~ii~ 496 (717)
.+|.|+++|+ ++ .+.|||++|+.+....+.+-......+..+++..++...+.. .+
T Consensus 18 v~i~Sl~~~~-------~~--~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~---~~------------ 73 (246)
T cd00505 18 VLMKSVLRHR-------TK--PLRFHVLTNPLSDTFKAALDNLRKLYNFNYELIPVDILDSVD---SE------------ 73 (246)
T ss_pred HHHHHHHHhC-------CC--CeEEEEEEccccHHHHHHHHHHHhccCceEEEEeccccCcch---hh------------
Confidence 4678999998 55 799999999988876665544433446778877654222100 00
Q ss_pred EEecccccCCCcccccCCCCCccHhhhHHhhhhhhcCCCCeEEEEecCeeEecCchhhhccCCCCCeeEEeecccccccc
Q 005035 497 YYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGETFHR 576 (717)
Q Consensus 497 ~yF~~~~~~sd~~lk~r~p~yiS~lnylRFfIPeLfPelDKVLYLD~DVIVqgDLseLwdiDL~GkviAAVeDc~~~f~r 576 (717)
...++++..+|+||+||+++|+++||||||+|+||++||++||++|++|+++|||+||.....
T Consensus 74 ----------------~~~~~~~~~~y~RL~i~~llp~~~kvlYLD~D~iv~~di~~L~~~~l~~~~~aav~d~~~~~~- 136 (246)
T cd00505 74 ----------------HLKRPIKIVTLTKLHLPNLVPDYDKILYVDADILVLTDIDELWDTPLGGQELAAAPDPGDRRE- 136 (246)
T ss_pred ----------------hhcCccccceeHHHHHHHHhhccCeEEEEcCCeeeccCHHHHhhccCCCCeEEEccCchhhhc-
Confidence 012567889999999999999999999999999999999999999999999999999864211
Q ss_pred cccccccCCcccccCCCCCCCceeeeeeeeechHHHHhhHHHHHHHHHHhcccccccccCCCCccccccccc---eeecc
Q 005035 577 FDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKR---TYPLD 653 (717)
Q Consensus 577 y~~YLNfSnP~i~~~fdp~~cyFNSGVLLIDL~kWRe~nITeky~~w~k~N~d~~L~dqGdLp~~Li~F~g~---i~~LD 653 (717)
..+... ..+...+.+||||||||||+++||++++.++..++...+.... ..+||+..+.+|.++ +..||
T Consensus 137 -~~~~~~-----~~~~~~~~~yfNsGVmlinl~~~r~~~~~~~~~~~~~~~~~~~--~~~DQd~LN~~~~~~~~~i~~L~ 208 (246)
T cd00505 137 -GKYYRQ-----KRSHLAGPDYFNSGVFVVNLSKERRNQLLKVALEKWLQSLSSL--SGGDQDLLNTFFKQVPFIVKSLP 208 (246)
T ss_pred -cchhhc-----ccCCCCCCCceeeeeEEEechHHHHHHHHHHHHHHHHhhcccC--ccCCcHHHHHHHhcCCCeEEECC
Confidence 111000 0123345689999999999999998888888777654433222 225555566788998 99999
Q ss_pred CccccccCCCCCCC--cccccCCCeEEEeeCCCCCcc
Q 005035 654 RFWHVLGLGYNPSV--NQRDIERAAVIHYNGNMKPWL 688 (717)
Q Consensus 654 ~rWN~lgLGy~~~i--s~e~ie~aaIIHYnG~~KPWl 688 (717)
.+||++..++.... ..+..++|+||||+|+.|||.
T Consensus 209 ~~wN~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~ 245 (246)
T cd00505 209 CIWNVRLTGCYRSLNCFKAFVKNAKVIHFNGPTKPWN 245 (246)
T ss_pred CeeeEEecCccccccchhhhcCCCEEEEeCCCCCCCC
Confidence 99999976654321 123467899999999999996
No 14
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=100.00 E-value=3.9e-34 Score=287.08 Aligned_cols=222 Identities=20% Similarity=0.265 Sum_probs=165.4
Q ss_pred cccccccCCCCCCCCCCCCCCccEEEEEEeCcccHHH---HHHHHHhCCCCCceEEEEeecccccccCcchHHHhhcccc
Q 005035 416 RPLLSVDMSNSPCCIEPLQHPSNHVFHIVTDRLNYAA---MRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQ 492 (717)
Q Consensus 416 ~~~i~sil~ns~~~~e~~kep~~lVFHIVTD~~ny~a---Mk~WF~~Np~~~A~IeV~nIedf~wln~s~~PVLkqL~s~ 492 (717)
..+|.|+++|+ .+ +.+.|||++++.+-.. ++.++.. .+..|++..++.-.+ ....
T Consensus 16 ~~~l~Sl~~~~-------~~-~~~~~~il~~~is~~~~~~L~~~~~~---~~~~i~~~~i~~~~~---------~~~~-- 73 (248)
T cd04194 16 AVTIKSILANN-------SK-RDYDFYILNDDISEENKKKLKELLKK---YNSSIEFIKIDNDDF---------KFFP-- 73 (248)
T ss_pred HHHHHHHHhcC-------CC-CceEEEEEeCCCCHHHHHHHHHHHHh---cCCeEEEEEcCHHHH---------hcCC--
Confidence 45788999998 44 5799999999866554 4444433 356777665542111 1100
Q ss_pred cceeEEecccccCCCcccccCCCCCccHhhhHHhhhhhhcCCCCeEEEEecCeeEecCchhhhccCCCCCeeEEeecccc
Q 005035 493 SMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGE 572 (717)
Q Consensus 493 ~ii~~yF~~~~~~sd~~lk~r~p~yiS~lnylRFfIPeLfPelDKVLYLD~DVIVqgDLseLwdiDL~GkviAAVeDc~~ 572 (717)
...++++.++|+||++|+++|+++||||||+|+||++||++||++|++|+++|||+||..
T Consensus 74 --------------------~~~~~~~~~~y~rl~l~~ll~~~~rvlylD~D~lv~~di~~L~~~~~~~~~~aa~~d~~~ 133 (248)
T cd04194 74 --------------------ATTDHISYATYYRLLIPDLLPDYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFI 133 (248)
T ss_pred --------------------cccccccHHHHHHHHHHHHhcccCEEEEEeCCEEecCCHHHHhcCCcCCCEEEEEecccH
Confidence 013477899999999999999999999999999999999999999999999999999864
Q ss_pred cccccccccccCCcccccCCCCCCCceeeeeeeeechHHHHhhHHHHHHHHHHhcccccccccCCCCccccccccceeec
Q 005035 573 TFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKRTYPL 652 (717)
Q Consensus 573 ~f~ry~~YLNfSnP~i~~~fdp~~cyFNSGVLLIDL~kWRe~nITeky~~w~k~N~d~~L~dqGdLp~~Li~F~g~i~~L 652 (717)
....... ...+.....+||||||||+|+++||+.++++++.+++..+.... ..++|+..+.+|++++..|
T Consensus 134 ~~~~~~~--------~~~~~~~~~~yfNsGv~l~nl~~~r~~~~~~~~~~~~~~~~~~~--~~~DQd~LN~~~~~~~~~L 203 (248)
T cd04194 134 EQEKKRK--------RRLGGYDDGSYFNSGVLLINLKKWREENITEKLLELIKEYGGRL--IYPDQDILNAVLKDKILYL 203 (248)
T ss_pred HHHHHHH--------hhcCCCcccceeeecchheeHHHHHHhhhHHHHHHHHHhCCCce--eeCChHHHHHHHhCCeEEc
Confidence 3211100 01123345689999999999999999999999999998765422 2356666778999999999
Q ss_pred cCccccccCCCCCCC--------cccccCCCeEEEeeCCCCCccc
Q 005035 653 DRFWHVLGLGYNPSV--------NQRDIERAAVIHYNGNMKPWLE 689 (717)
Q Consensus 653 D~rWN~lgLGy~~~i--------s~e~ie~aaIIHYnG~~KPWl~ 689 (717)
|.+||++..++.... .....++|+||||+|+.|||..
T Consensus 204 ~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~iiHf~g~~KPW~~ 248 (248)
T cd04194 204 PPRYNFQTGFYYLLKKKSKEEQELEEARKNPVIIHYTGSDKPWNK 248 (248)
T ss_pred CcccccchhHhHHhhccchhHHHHHHHhcCCEEEEeCCCCCCCCC
Confidence 999999865443211 0134578999999999999963
No 15
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=99.97 E-value=5.4e-32 Score=264.19 Aligned_cols=233 Identities=24% Similarity=0.373 Sum_probs=153.3
Q ss_pred cccccccCCCCCCCCCCCCCCccEEEEEEeCcccHHHHHHHHHhCCCCCceEEEEeecccccccCcchHHHhhcccccce
Q 005035 416 RPLLSVDMSNSPCCIEPLQHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMI 495 (717)
Q Consensus 416 ~~~i~sil~ns~~~~e~~kep~~lVFHIVTD~~ny~aMk~WF~~Np~~~A~IeV~nIedf~wln~s~~PVLkqL~s~~ii 495 (717)
..+|.|++.|+ .++..++|||++|+.+-...+..............+. ..+.. .++....
T Consensus 15 ~v~i~Sl~~~~-------~~~~~~~i~i~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~--------~~~~~~~---- 74 (250)
T PF01501_consen 15 AVLIKSLLKNN-------PDPSNLHIYIITDDISEEDFEKLRALAAEVIEIEPIE-FPDIS--------MLEEFQF---- 74 (250)
T ss_dssp HHHHHHHHHTT-------TT-SSEEEEEEESSS-HHHHHHHHHHSCCCCTTECEE-ETSGG--------HHH--TT----
T ss_pred HHHHHHHHHhc-------cccccceEEEecCCCCHHHHHHHhhhcccccceeeec-cchHH--------hhhhhhh----
Confidence 35778999999 7778999999999988777766544432221111111 11110 0000000
Q ss_pred eEEecccccCCCcccccCCCCCccHhhhHHhhhhhhcCCCCeEEEEecCeeEecCchhhhccCCCCCeeEEeeccccccc
Q 005035 496 DYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGETFH 575 (717)
Q Consensus 496 ~~yF~~~~~~sd~~lk~r~p~yiS~lnylRFfIPeLfPelDKVLYLD~DVIVqgDLseLwdiDL~GkviAAVeDc~~~f~ 575 (717)
......+++.++|+||++|++||+++||||||+|+||.+||++||+++++|+.+||++|+..
T Consensus 75 ---------------~~~~~~~~~~~~~~rl~i~~ll~~~drilyLD~D~lv~~dl~~lf~~~~~~~~~~a~~~~~~--- 136 (250)
T PF01501_consen 75 ---------------NSPSKRHFSPATFARLFIPDLLPDYDRILYLDADTLVLGDLDELFDLDLQGKYLAAVEDESF--- 136 (250)
T ss_dssp ---------------S-HCCTCGGGGGGGGGGHHHHSTTSSEEEEE-TTEEESS-SHHHHC---TTSSEEEEE-------
T ss_pred ---------------cccccccccHHHHHHhhhHHHHhhcCeEEEEcCCeeeecChhhhhcccchhhhccccccchh---
Confidence 00134688999999999999999999999999999999999999999999999999999321
Q ss_pred ccccccccCCcccccCCCCCCCceeeeeeeeechHHHHhhHHHHHHHHHHhcccccccccCCCCccccccccceeeccCc
Q 005035 576 RFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKRTYPLDRF 655 (717)
Q Consensus 576 ry~~YLNfSnP~i~~~fdp~~cyFNSGVLLIDL~kWRe~nITeky~~w~k~N~d~~L~dqGdLp~~Li~F~g~i~~LD~r 655 (717)
....+...+..........++||+||||+|+++||++++.+++..+++.+.. ....++|+..+.+|.+.+..||.+
T Consensus 137 --~~~~~~~~~~~~~~~~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~DQ~~ln~~~~~~~~~L~~~ 212 (250)
T PF01501_consen 137 --DNFPNKRFPFSERKQPGNKPYFNSGVMLFNPSKWRKENILQKLIEWLEQNGM--KLGFPDQDILNIVFYGNIKPLPCR 212 (250)
T ss_dssp --HHHHTSTTSSEEECESTTTTSEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTT--T-SSCHHHHHHHHHTTGEEEEEGG
T ss_pred --hhhhhcccchhhcccCcccccccCcEEEEeechhhhhhhhhhhhhhhhhccc--ccCcCchHHHhhhccceeEEECch
Confidence 1111111111111223457899999999999999999999999999876544 223467777778999999999999
Q ss_pred cccccCCCCCC--CcccccCCCeEEEeeCCCCCcccC
Q 005035 656 WHVLGLGYNPS--VNQRDIERAAVIHYNGNMKPWLEI 690 (717)
Q Consensus 656 WN~lgLGy~~~--is~e~ie~aaIIHYnG~~KPWl~~ 690 (717)
||++..++... ......++++||||+|..|||...
T Consensus 213 ~N~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~ 249 (250)
T PF01501_consen 213 YNCQPSWYNQSDDYFNPILEDAKIIHYSGPPKPWKST 249 (250)
T ss_dssp GSEEHHHHHHTHHHHHHHGCC-SEEE--SSS-TTSTT
T ss_pred hccccccccccchhhHhhcCCeEEEEeCCCCcCCCCC
Confidence 99997655110 012345789999999999999865
No 16
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=99.97 E-value=1.5e-30 Score=275.91 Aligned_cols=244 Identities=22% Similarity=0.272 Sum_probs=175.5
Q ss_pred ccccccCCCCCCCCCCCCCCccEEEEEEeCcccHHHHHHHHHhCCCC--CceEEEEeecccccccCcchHHHhhcccccc
Q 005035 417 PLLSVDMSNSPCCIEPLQHPSNHVFHIVTDRLNYAAMRMWFLANPPG--RATVQVQNIEEFTWLNSSYSPVLKQLNSQSM 494 (717)
Q Consensus 417 ~~i~sil~ns~~~~e~~kep~~lVFHIVTD~~ny~aMk~WF~~Np~~--~A~IeV~nIedf~wln~s~~PVLkqL~s~~i 494 (717)
..|.|||.|. +. -.+-|||++|+.+-+-++..-..-.+- .+.+.+++++.|+ ++-|
T Consensus 19 vsI~SiL~~n-------~~-~~~~fhil~~~i~~e~~~~l~~~~~~f~~~i~~~~id~~~~~----~~~~---------- 76 (325)
T COG1442 19 VSIYSLLEHN-------RK-IFYKFHILVDGLNEEDKKKLNETAEPFKSFIVLEVIDIEPFL----DYPP---------- 76 (325)
T ss_pred HHHHHHHHhC-------cc-ccEEEEEEecCCCHHHHHHHHHHHHhhccceeeEEEechhhh----cccc----------
Confidence 4577888887 33 589999999999988776665543322 2333333333331 0100
Q ss_pred eeEEecccccCCCcccccCCCCCccHhhhHHhhhhhhcCCCCeEEEEecCeeEecCchhhhccCCCCCeeEEeecccccc
Q 005035 495 IDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGETF 574 (717)
Q Consensus 495 i~~yF~~~~~~sd~~lk~r~p~yiS~lnylRFfIPeLfPelDKVLYLD~DVIVqgDLseLwdiDL~GkviAAVeDc~~~f 574 (717)
..+++|.++|+|||||++||+++|+||||+|+||+|||++||.+|++|+++|||.|+....
T Consensus 77 -------------------~~~~~s~~v~~R~fiadlf~~~dK~lylD~Dvi~~g~l~~lf~~~~~~~~~aaV~D~~~~~ 137 (325)
T COG1442 77 -------------------FTKRFSKMVLVRYFLADLFPQYDKMLYLDVDVIFCGDLSELFFIDLEEYYLAAVRDVFSHY 137 (325)
T ss_pred -------------------cccchHHHHHHHHHHHHhccccCeEEEEecCEEEcCcHHHHHhcCCCcceEEEEeehhhhh
Confidence 1357899999999999999999999999999999999999999999999999999986321
Q ss_pred cccccccccCCcccccCCCCCCCceeeeeeeeechHHHHhhHHHHHHHHHHhcccccccccCCCCccccccccceeeccC
Q 005035 575 HRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKRTYPLDR 654 (717)
Q Consensus 575 ~ry~~YLNfSnP~i~~~fdp~~cyFNSGVLLIDL~kWRe~nITeky~~w~k~N~d~~L~dqGdLp~~Li~F~g~i~~LD~ 654 (717)
. ...+. ..........|||||||++|++.||+++++++++++.+...+.. ..++|+..+.+|++++.+|+.
T Consensus 138 ~--~~~~~-----~~~~~~~~~~yFNaG~llinl~~W~~~~i~~k~i~~~~~~~~~~--~~~DQdiLN~i~~~~~~~L~~ 208 (325)
T COG1442 138 M--KEGAL-----RLEKGDLEGSYFNAGVLLINLKLWREENIFEKLIELLKDKENDL--LYPDQDILNMIFEDRVLELPI 208 (325)
T ss_pred h--hhhhh-----HhhhcccccccCccceeeehHHHHHHhhhHHHHHHHHhcccccc--CCccccHHHHHHHhhhhccCc
Confidence 0 00000 00111224568999999999999999999999999986544332 346677788999999999999
Q ss_pred ccccccCCCC-CCC--cccccCCCeEEEeeCCCCCcccCCccccH-HHHHHHhccCcchhh
Q 005035 655 FWHVLGLGYN-PSV--NQRDIERAAVIHYNGNMKPWLEINIPKYR-NYWTKHVDYDQLYLR 711 (717)
Q Consensus 655 rWN~lgLGy~-~~i--s~e~ie~aaIIHYnG~~KPWl~~~~~~Yr-d~WwkY~~~d~~flr 711 (717)
+||++...-. ... ....-.+|.|+||+|+.|||...+.+.++ .+|..... ..||..
T Consensus 209 ~YN~~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~~~~~~~~~~w~~i~~-~~p~~~ 268 (325)
T COG1442 209 RYNAIPYIDSQLKDKYIYPFGDDPVILHYAGPTKPWHSDSSNYPRSHEWHEILA-ETPWKN 268 (325)
T ss_pred ccceeehhhhccchhhhccCCCCceEEEecCCCCCCcCccccccHHHHHHHHHh-cCCccc
Confidence 9999853211 110 01223578999999999999999877775 56666653 355543
No 17
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=99.95 E-value=2.4e-28 Score=257.09 Aligned_cols=179 Identities=17% Similarity=0.338 Sum_probs=132.8
Q ss_pred CCccHhhhHHhhhhhhcCCCCeEEEEecCeeEecCchhhhcc--CCCCC-eeEEeeccccc-ccccccccccCCcccccC
Q 005035 516 KYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSI--DLKGK-VNGAVETCGET-FHRFDRYLNFSNPLISKN 591 (717)
Q Consensus 516 ~yiS~lnylRFfIPeLfPelDKVLYLD~DVIVqgDLseLwdi--DL~Gk-viAAVeDc~~~-f~ry~~YLNfSnP~i~~~ 591 (717)
..+++.+|+||+||++||++|||||||+|+||.+||++||++ |++|+ ++|++++.... ...|.++. ...
T Consensus 78 ~l~~~~~y~RL~ip~lLp~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~~~~~~~~~~~-------~~~ 150 (304)
T cd06430 78 KLFKPCAAQRLFLPSLLPDVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPNIGWYNRFA-------RHP 150 (304)
T ss_pred hcccHHHHHHHHHHHHhhhhceEEEeccceeecCCHHHHHHHHhhcCCCeEEEEEecccccchhhhhhhc-------ccC
Confidence 456779999999999999999999999999999999999999 99986 55555653210 11111110 111
Q ss_pred CCCCCCceeeeeeeeechHHHH-----------hhHHHHHHHHHHhcccccccccCCCCccccccccc---eeeccCccc
Q 005035 592 FDPRACGWAYGMNIFDLDEWRR-----------QNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKR---TYPLDRFWH 657 (717)
Q Consensus 592 fdp~~cyFNSGVLLIDL~kWRe-----------~nITeky~~w~k~N~d~~L~dqGdLp~~Li~F~g~---i~~LD~rWN 657 (717)
+ .+..|||||||+|||++||+ .++++++.++++.+.....| |||+..+.+|+++ ++.||++||
T Consensus 151 ~-~~~~gFNSGVmLmNL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~DQDiLN~v~~~~p~~~~~Lp~~wN 227 (304)
T cd06430 151 Y-YGKTGVNSGVMLMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKKYKLKITW--GDQDLINIIFHHNPEMLYVFPCHWN 227 (304)
T ss_pred c-ccccccccceeeeeHHHHHhhhcccccchhhhhHHHHHHHHHHhcccCCCC--CCHHHHHHHHcCCCCeEEEcCcccc
Confidence 1 12347999999999999999 78899999998876544434 6666677788887 999999999
Q ss_pred cccCCCCCCCcc--cccCCCeEEEeeCCCCCcccCCccccHHHHHHHhccC
Q 005035 658 VLGLGYNPSVNQ--RDIERAAVIHYNGNMKPWLEINIPKYRNYWTKHVDYD 706 (717)
Q Consensus 658 ~lgLGy~~~is~--e~ie~aaIIHYnG~~KPWl~~~~~~Yrd~WwkY~~~d 706 (717)
++...+.++..+ .+.+.++|||++++.| .....+.||.++....+|+
T Consensus 228 ~~~d~~~y~~~~~~~~~~~~~~~H~n~~~~--~~~~~~~f~~~~~~~~~~~ 276 (304)
T cd06430 228 YRPDHCMYGSNCKAAEEEGVFILHGNRGVY--HSDKQPAFRAVYEAIREYT 276 (304)
T ss_pred CCccceeecccccccccccceEEEcCCCCC--CCccchHHHHHHHHHHhcc
Confidence 876443333332 2346899999998766 4445567899998888776
No 18
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=99.94 E-value=2.5e-27 Score=242.48 Aligned_cols=217 Identities=17% Similarity=0.205 Sum_probs=146.1
Q ss_pred ccccccCCCCCCCCCCCCCCccEEEEEEeCcccHHHHHHHHHhCCCCCceEEEEeecccccccCcchHHHhhccccccee
Q 005035 417 PLLSVDMSNSPCCIEPLQHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMID 496 (717)
Q Consensus 417 ~~i~sil~ns~~~~e~~kep~~lVFHIVTD~~ny~aMk~WF~~Np~~~A~IeV~nIedf~wln~s~~PVLkqL~s~~ii~ 496 (717)
.+|.|++.|. . ..+.|||++|+++-+.....-..-...++.++++.++.-.|+. ...
T Consensus 18 v~l~Sll~nn-------~--~~~~fyil~~~is~e~~~~l~~~~~~~~~~i~~i~i~~~~~~~--------~~~------ 74 (248)
T cd06432 18 IMMLSVMKNT-------K--SPVKFWFIKNFLSPQFKEFLPEMAKEYGFEYELVTYKWPRWLH--------KQT------ 74 (248)
T ss_pred HHHHHHHHcC-------C--CCEEEEEEeCCCCHHHHHHHHHHHHHhCCceEEEEecChhhhh--------ccc------
Confidence 4577888886 3 4799999999988664443322222336677777664222211 000
Q ss_pred EEecccccCCCcccccCCCCCccHhhhHHhhhhhhcCC-CCeEEEEecCeeEecCchhhhccCCCCCeeEEeeccccccc
Q 005035 497 YYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPR-LNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGETFH 575 (717)
Q Consensus 497 ~yF~~~~~~sd~~lk~r~p~yiS~lnylRFfIPeLfPe-lDKVLYLD~DVIVqgDLseLwdiDL~GkviAAVeDc~~~f~ 575 (717)
...+ ..++|.|++++++||+ ++||||||+|+||.+||++||++||+|+++|||+||....
T Consensus 75 -----------------~~~~-~~~~y~rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~~~~~Aav~d~~~~~- 135 (248)
T cd06432 75 -----------------EKQR-IIWGYKILFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDLKGAPYGYTPFCDSRK- 135 (248)
T ss_pred -----------------ccch-hHHHHHHHHHHHhhhhccCEEEEEcCCceecccHHHHHhcCcCCCeEEEeeccccch-
Confidence 0011 2467999999999995 9999999999999999999999999999999999986421
Q ss_pred ccccccccCCcccccCCCCCCCceeeeeeeeechHHHHhhHHHHHHHHHH---hcccc-cccccCCCCccccccccc-ee
Q 005035 576 RFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQK---MNHDR-QLWKLGTLPPGLITFWKR-TY 650 (717)
Q Consensus 576 ry~~YLNfSnP~i~~~fdp~~cyFNSGVLLIDL~kWRe~nITeky~~w~k---~N~d~-~L~dqGdLp~~Li~F~g~-i~ 650 (717)
+......+.......++ .+..|||||||||||++||++++++++.++++ .+..+ ..+||+.|| .++.+. +.
T Consensus 136 ~~~~~~~~~~~~~~~~l-~~~~YfNSGVmliNL~~wR~~~i~~~~~~~~~~l~~~~~~l~~~DQDiLN---~v~~~~~i~ 211 (248)
T cd06432 136 EMDGFRFWKQGYWKSHL-RGRPYHISALYVVDLKRFRRIAAGDRLRGQYQQLSQDPNSLANLDQDLPN---NMQHQVPIF 211 (248)
T ss_pred hcccchhhhhhhhhhhc-CCCCccceeeEEEeHHHHHHHhHHHHHHHHHHHHhcCCCccccCCchhhH---HHhccCCeE
Confidence 10100000000000122 23469999999999999999999997776554 23222 234666655 567775 99
Q ss_pred eccCccccccCCCCCCCcccccCCCeEEEeeCC
Q 005035 651 PLDRFWHVLGLGYNPSVNQRDIERAAVIHYNGN 683 (717)
Q Consensus 651 ~LD~rWN~lgLGy~~~is~e~ie~aaIIHYnG~ 683 (717)
+||.+||++...+. .+..+.|.+|||+.+
T Consensus 212 ~Lp~~w~~~~~~~~----~~~~~~~~~~~~~~~ 240 (248)
T cd06432 212 SLPQEWLWCETWCS----DESKKKAKTIDLCNN 240 (248)
T ss_pred ECChHHHHHHHHhc----ccccCccceeecccC
Confidence 99999999743222 244678999999874
No 19
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=99.88 E-value=3.9e-22 Score=202.03 Aligned_cols=154 Identities=18% Similarity=0.166 Sum_probs=115.1
Q ss_pred CccHhhhHHhhhhhhcCCCCeEEEEecCeeEecCchhhhccCCCCCeeEEeecccccccccccccccCCcccccCCCCCC
Q 005035 517 YLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGETFHRFDRYLNFSNPLISKNFDPRA 596 (717)
Q Consensus 517 yiS~lnylRFfIPeLfPelDKVLYLD~DVIVqgDLseLwdiDL~GkviAAVeDc~~~f~ry~~YLNfSnP~i~~~fdp~~ 596 (717)
+++..+|.|++++++. +++||||||+|+||.+||++||++ ++.+||+.|+.. .
T Consensus 73 ~~~~~~~~kl~~~~l~-~~drvlylD~D~~v~~~i~~Lf~~---~~~~~a~~d~~~-----------------------~ 125 (240)
T cd02537 73 PRFKDTYTKLRLWNLT-EYDKVVFLDADTLVLRNIDELFDL---PGEFAAAPDCGW-----------------------P 125 (240)
T ss_pred hHHHHHhHHHHhcccc-ccceEEEEeCCeeEccCHHHHhCC---CCceeeecccCc-----------------------c
Confidence 4566889999999975 599999999999999999999987 677888877520 2
Q ss_pred CceeeeeeeeechHHHHhhHHHHHHHHHHhcccccccccCCCCccccccccc--eeeccCccccccCCCCCCCc-ccccC
Q 005035 597 CGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKR--TYPLDRFWHVLGLGYNPSVN-QRDIE 673 (717)
Q Consensus 597 cyFNSGVLLIDL~kWRe~nITeky~~w~k~N~d~~L~dqGdLp~~Li~F~g~--i~~LD~rWN~lgLGy~~~is-~e~ie 673 (717)
.+||||||+++++. ++.+.+.+++..+.. +..++|...+.+|.++ +..||.+||++...+..... ....+
T Consensus 126 ~~fNsGv~l~~~~~----~~~~~~~~~~~~~~~---~~~~DQdiLN~~~~~~~~~~~l~~~yN~~~~~~~~~~~~~~~~~ 198 (240)
T cd02537 126 DLFNSGVFVLKPSE----ETFNDLLDALQDTPS---FDGGDQGLLNSYFSDRGIWKRLPFTYNALKPLRYLHPEALWFGD 198 (240)
T ss_pred ccccceEEEEcCCH----HHHHHHHHHHhccCC---CCCCCHHHHHHHHcCCCCEeECCcceeeehhhhccCchhhcccC
Confidence 58999999999964 455566666654432 3345666666789999 99999999998543321101 12345
Q ss_pred CCeEEEeeCCCCCcccCCcc---------ccHHHHHHHhc
Q 005035 674 RAAVIHYNGNMKPWLEINIP---------KYRNYWTKHVD 704 (717)
Q Consensus 674 ~aaIIHYnG~~KPWl~~~~~---------~Yrd~WwkY~~ 704 (717)
+|+||||+|+.|||...+.. .....||..+.
T Consensus 199 ~~~iiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~w~~~~~ 238 (240)
T cd02537 199 EIKVVHFIGGDKPWSWWRDPETKEKDDYNELHQWWWDIYD 238 (240)
T ss_pred CcEEEEEeCCCCCCCCCcCCCcccccchHHHHHHHHHHHh
Confidence 79999999999999876433 46778887763
No 20
>PLN00176 galactinol synthase
Probab=99.85 E-value=2.1e-21 Score=207.05 Aligned_cols=174 Identities=16% Similarity=0.296 Sum_probs=117.3
Q ss_pred hhhHHhhhhhhcCCCCeEEEEecCeeEecCchhhhccCCCCCeeEEeecccccc--cccccc-cccCC--c-cc--ccCC
Q 005035 521 LNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGETF--HRFDRY-LNFSN--P-LI--SKNF 592 (717)
Q Consensus 521 lnylRFfIPeLfPelDKVLYLD~DVIVqgDLseLwdiDL~GkviAAVeDc~~~f--~ry~~Y-LNfSn--P-~i--~~~f 592 (717)
.+|.||.|+++. +++||||||+|+||.++|++||+++ +..+|||.||.... ..+..| +.... | .+ ....
T Consensus 100 i~~tKl~iw~l~-~ydkvlyLDaD~lv~~nid~Lf~~~--~~~~aAV~dc~~~~~~~~~p~~~~~~c~~~~~~~~wp~~~ 176 (333)
T PLN00176 100 INYSKLRIWEFV-EYSKMIYLDGDIQVFENIDHLFDLP--DGYFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVTWPAEL 176 (333)
T ss_pred hhhhhhhhcccc-ccceEEEecCCEEeecChHHHhcCC--CcceEEEecccccccccccccccccccccchhhccchhhc
Confidence 568899999975 5999999999999999999999884 33589999986431 111111 00000 0 00 0011
Q ss_pred C-CCCCceeeeeeeeechHHHHhhHHHHHHHHHHhcccccccccCCCCccccccccceeeccCccccccC-CC-CCCCcc
Q 005035 593 D-PRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKRTYPLDRFWHVLGL-GY-NPSVNQ 669 (717)
Q Consensus 593 d-p~~cyFNSGVLLIDL~kWRe~nITeky~~w~k~N~d~~L~dqGdLp~~Li~F~g~i~~LD~rWN~lgL-Gy-~~~is~ 669 (717)
. +...||||||||||++.|+.+++.+ ++..+.... .+||..++.+|.++|.+||.+||++.. -+ .+. .
T Consensus 177 g~~~~~yFNSGVlvinps~~~~~~ll~----~l~~~~~~~---f~DQD~LN~~F~~~~~~Lp~~YN~~~~~~~~~~~--~ 247 (333)
T PLN00176 177 GPPPPLYFNAGMFVFEPSLSTYEDLLE----TLKITPPTP---FAEQDFLNMFFRDIYKPIPPVYNLVLAMLWRHPE--N 247 (333)
T ss_pred cCCCCCeEEeEEEEEEcCHHHHHHHHH----HHHhcCCCC---CCCHHHHHHHHcCcEEECCchhcCchhhhhhChh--h
Confidence 1 2357999999999999999877654 343333222 255555668899999999999999732 11 111 1
Q ss_pred cccCCCeEEEeeC-CCCCcccCCc---------cccHHHHHHHhccC
Q 005035 670 RDIERAAVIHYNG-NMKPWLEINI---------PKYRNYWTKHVDYD 706 (717)
Q Consensus 670 e~ie~aaIIHYnG-~~KPWl~~~~---------~~Yrd~WwkY~~~d 706 (717)
-..++++||||+| ..|||...+. ..+.++||..++-+
T Consensus 248 ~~~~~vkIIHY~~~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~ 294 (333)
T PLN00176 248 VELDKVKVVHYCAAGSKPWRYTGKEENMDREDIKMLVKKWWDIYNDE 294 (333)
T ss_pred cccCCcEEEEeeCCCCCCCCCCCcccCCChHHHHHHHHHHHHHhccc
Confidence 1246899999997 5799986542 22467899998643
No 21
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=99.65 E-value=1.8e-16 Score=165.91 Aligned_cols=141 Identities=11% Similarity=0.182 Sum_probs=103.7
Q ss_pred CccHhhhHHhhhhhhcCCCCeEEEEecCeeEecCchhhhccCCCCCeeEEeecccccccccccccccCCcccccCCCCCC
Q 005035 517 YLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGETFHRFDRYLNFSNPLISKNFDPRA 596 (717)
Q Consensus 517 yiS~lnylRFfIPeLfPelDKVLYLD~DVIVqgDLseLwdiDL~GkviAAVeDc~~~f~ry~~YLNfSnP~i~~~fdp~~ 596 (717)
.++. +|.||.++++ ++++||||||+|+||.++|++||+++. ...+||+. . .
T Consensus 76 ~~~~-~~tKl~~~~l-~~y~kvlyLDaD~l~~~~ideLf~~~~-~~~~Aap~-~-------------------------~ 126 (278)
T cd06914 76 YWAK-SLTKLRAFNQ-TEYDRIIYFDSDSIIRHPMDELFFLPN-YIKFAAPR-A-------------------------Y 126 (278)
T ss_pred cHHH-HHHHHHhccc-cceeeEEEecCChhhhcChHHHhcCCc-ccceeeec-C-------------------------c
Confidence 4443 5999999998 679999999999999999999999873 33355543 1 0
Q ss_pred CceeeeeeeeechHHHHhhHHHHHHHHHHhcccccccccCCCCccccccccc-------eeeccCc-cccccCCCC-C--
Q 005035 597 CGWAYGMNIFDLDEWRRQNITDVYHTWQKMNHDRQLWKLGTLPPGLITFWKR-------TYPLDRF-WHVLGLGYN-P-- 665 (717)
Q Consensus 597 cyFNSGVLLIDL~kWRe~nITeky~~w~k~N~d~~L~dqGdLp~~Li~F~g~-------i~~LD~r-WN~lgLGy~-~-- 665 (717)
.+||||||||+++.|+.+++.++..+....+ ...+|||.| +..|.+. +..||.+ ||++...+. +
T Consensus 127 ~~FNSGvmvi~ps~~~~~~l~~~~~~~~~~~--~~~~DQdiL---N~~~~~~~~~~~~~~~~Lp~~~y~llt~~~r~~~~ 201 (278)
T cd06914 127 WKFASHLMVIKPSKEAFKELMTEILPAYLNK--KNEYDMDLI---NEEFYNSKQLFKPSVLVLPHRQYGLLTGEFREKLH 201 (278)
T ss_pred ceecceeEEEeCCHHHHHHHHHHHHHhcccC--CCCCChHHH---HHHHhCCccccCcceEEcCccccccCChhhcccCH
Confidence 1899999999999999999999988764322 134455554 4678888 9999986 998742111 0
Q ss_pred -----C--Cc------ccccCCCeEEEeeCC--CCCcccCC
Q 005035 666 -----S--VN------QRDIERAAVIHYNGN--MKPWLEIN 691 (717)
Q Consensus 666 -----~--is------~e~ie~aaIIHYnG~--~KPWl~~~ 691 (717)
+ .+ .+.+.++++|||++. .|||....
T Consensus 202 ~~~l~~~~~~~~~w~~~~~~~~~k~vHFSd~Pl~KPW~~~~ 242 (278)
T cd06914 202 KSFLSNAQHLYEKWDPDDVFKESKVIHFSDSPLPKPWNYNN 242 (278)
T ss_pred HHhhccccccccccCHHHHHhhCeEEEecCCCCCCCcCCcC
Confidence 0 00 122467999999986 69998753
No 22
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]
Probab=99.06 E-value=8e-11 Score=140.00 Aligned_cols=176 Identities=22% Similarity=0.296 Sum_probs=130.8
Q ss_pred HhhhHHhhhhhhcCC-CCeEEEEecCeeEecCchhhhccCCCCCeeEEeecccccccccccccccCCcccccCCCCCCCc
Q 005035 520 ILNHLRFYLPEVFPR-LNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGETFHRFDRYLNFSNPLISKNFDPRACG 598 (717)
Q Consensus 520 ~lnylRFfIPeLfPe-lDKVLYLD~DVIVqgDLseLwdiDL~GkviAAVeDc~~~f~ry~~YLNfSnP~i~~~fdp~~cy 598 (717)
++.|-=+||.-|||- ++||||.|+|-||+.||.||.++|++|.+.|-++.|..+ ..+++|-.|+...+.+.. .+..|
T Consensus 1261 iWgyKILFLDVLFPL~v~KvIfVDADQIVR~DL~EL~dfdl~GaPygYtPfCdsR-~EMDGyRFWK~GYW~~hL-~grkY 1338 (1470)
T KOG1879|consen 1261 IWGYKILFLDVLFPLNVDKVIFVDADQIVRADLKELMDFDLGGAPYGYTPFCDSR-REMDGYRFWKQGYWKKHL-RGRKY 1338 (1470)
T ss_pred hhhhhhhhhhhccccccceEEEEcchHhhhhhhHHHHhcccCCCccccCcccccc-ccccchhHHhhhHHHHHh-ccCcc
Confidence 366777889999995 999999999999999999999999999999999999743 245566556544333323 34679
Q ss_pred eeeeeeeeechHHHHhhHHHHHHHH-HHhccccc-ccc-cCCCCccccccccceeeccCccccccCCCCCCCcccccCCC
Q 005035 599 WAYGMNIFDLDEWRRQNITDVYHTW-QKMNHDRQ-LWK-LGTLPPGLITFWKRTYPLDRFWHVLGLGYNPSVNQRDIERA 675 (717)
Q Consensus 599 FNSGVLLIDL~kWRe~nITeky~~w-~k~N~d~~-L~d-qGdLp~~Li~F~g~i~~LD~rWN~lgLGy~~~is~e~ie~a 675 (717)
..|...|+||+++|+-.-++++.-. +....+.. +-+ .+|||. ++..+-.|+.||..|-++..+++ .+..+.|
T Consensus 1339 HISALYVVDLkrFReiaAGDrLR~qYQ~LS~DPNSLsNLDQDLPN-nm~hqVpIkSLPqeWLWCETWC~----d~skkkA 1413 (1470)
T KOG1879|consen 1339 HISALYVVDLKRFREIAAGDRLRGQYQALSQDPNSLSNLDQDLPN-NMQHQVPIKSLPQEWLWCETWCD----DESKKKA 1413 (1470)
T ss_pred ccceeeeeeHHHHHhcccchHHHHHHHhhcCCcchhhhccccccc-cceeecccccCCcchhhhhhhcC----chhhhhc
Confidence 9999999999999999988888743 33333321 222 246663 33445578899999999877765 2345789
Q ss_pred eEEEeeCCCCCcccC----CccccHHHHHHHhc
Q 005035 676 AVIHYNGNMKPWLEI----NIPKYRNYWTKHVD 704 (717)
Q Consensus 676 aIIHYnG~~KPWl~~----~~~~Yrd~WwkY~~ 704 (717)
++|--|.+ ||... +..+....|..|-.
T Consensus 1414 ktIDLCnN--P~TKEpKL~~A~Riv~EW~dyD~ 1444 (1470)
T KOG1879|consen 1414 KTIDLCNN--PLTKEPKLDAARRIVSEWTDYDA 1444 (1470)
T ss_pred hhhhhhcC--ccccchhhHHHhhhcCCCcccch
Confidence 99999975 99875 34566777877753
No 23
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=97.44 E-value=4.8e-05 Score=81.44 Aligned_cols=47 Identities=21% Similarity=0.264 Sum_probs=35.1
Q ss_pred hhhHHhhhhhhcCCCCeEEEEecCeeEecCchhhhccCCCCCeeEEeecc
Q 005035 521 LNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETC 570 (717)
Q Consensus 521 lnylRFfIPeLfPelDKVLYLD~DVIVqgDLseLwdiDL~GkviAAVeDc 570 (717)
.++-++.+-+.. ++|||+|||+|.||.+++++||+.. -+..+|-+|.
T Consensus 155 ~mftKLrVfeqt-EyDRvifLDsDaivlknmDklFd~P--vyef~a~pD~ 201 (368)
T COG5597 155 DMFTKLRVFEQT-EYDRVIFLDSDAIVLKNMDKLFDYP--VYEFAAAPDV 201 (368)
T ss_pred HHhHHHHhhhhh-hhceEEEeccchHHhhhhHHHhcch--hhhhccCCch
Confidence 445666665644 5999999999999999999999865 2445555554
No 24
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=94.82 E-value=0.056 Score=53.75 Aligned_cols=143 Identities=17% Similarity=0.066 Sum_probs=74.6
Q ss_pred ccHhhhHHhhh-hhhcCCCCeEEEEecCeeEecCchhhhccCCCCCeeEEeecccccccccccccccCCcccccCCCCCC
Q 005035 518 LSILNHLRFYL-PEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGETFHRFDRYLNFSNPLISKNFDPRA 596 (717)
Q Consensus 518 iS~lnylRFfI-PeLfPelDKVLYLD~DVIVqgDLseLwdiDL~GkviAAVeDc~~~f~ry~~YLNfSnP~i~~~fdp~~ 596 (717)
+..++..|.-+ -+++..=--|+|+|+|++..+|..++++ -.+.-+.+..|+.... ......
T Consensus 48 ~~~~~~~K~~~~~~~L~~G~~vl~~D~Dvv~~~dp~~~~~--~~~~Di~~~~d~~~~~----------------~~~~~~ 109 (212)
T PF03407_consen 48 FQKLTWLKPKVLLDLLELGYDVLFSDADVVWLRDPLPYFE--NPDADILFSSDGWDGT----------------NSDRNG 109 (212)
T ss_pred HHHHHHHHHHHHHHHHHcCCceEEecCCEEEecCcHHhhc--cCCCceEEecCCCccc----------------chhhcC
Confidence 34455566544 3445433459999999999999999992 1334344444553210 001122
Q ss_pred CceeeeeeeeechHHHHhhHHHH-HHHHHHhccc-ccccccCCCCcccccc-----ccceeeccCccccccCCCCCC-Cc
Q 005035 597 CGWAYGMNIFDLDEWRRQNITDV-YHTWQKMNHD-RQLWKLGTLPPGLITF-----WKRTYPLDRFWHVLGLGYNPS-VN 668 (717)
Q Consensus 597 cyFNSGVLLIDL~kWRe~nITek-y~~w~k~N~d-~~L~dqGdLp~~Li~F-----~g~i~~LD~rWN~lgLGy~~~-is 668 (717)
..+|+|++.+.-.. -+.. +.+|...-.+ ...|+|+.++..+..- .-++..||..--..|.+|--. ..
T Consensus 110 ~~~n~G~~~~r~t~-----~~~~~~~~w~~~~~~~~~~~DQ~~~n~~l~~~~~~~~~~~~~~L~~~~f~~g~~~f~~~~~ 184 (212)
T PF03407_consen 110 NLVNTGFYYFRPTP-----RTIAFLEDWLERMAESPGCWDQQAFNELLREQAARYGGLRVRFLPPSLFPNGHGYFCQSRD 184 (212)
T ss_pred CccccceEEEecCH-----HHHHHHHHHHHHHHhCCCcchHHHHHHHHHhcccCCcCcEEEEeCHHHeeccccceeecch
Confidence 34699999996543 3333 3345543222 2345666655433221 124556665333233333211 01
Q ss_pred ccc---cCCCeEEEeeCC
Q 005035 669 QRD---IERAAVIHYNGN 683 (717)
Q Consensus 669 ~e~---ie~aaIIHYnG~ 683 (717)
... -..|.+||.++.
T Consensus 185 ~~~~~~~~~p~~vH~n~~ 202 (212)
T PF03407_consen 185 WAWVPTKNKPYIVHANCC 202 (212)
T ss_pred hhhhccccccceEEEcCC
Confidence 111 247999999873
No 25
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=93.56 E-value=0.23 Score=55.81 Aligned_cols=159 Identities=18% Similarity=0.264 Sum_probs=84.3
Q ss_pred CCCccHhhhHHhhhhhhcCCCCeEEEEecCeeEecCchhhhccCCCCC--eeEEeecccccccccccccccCCcccccCC
Q 005035 515 PKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGK--VNGAVETCGETFHRFDRYLNFSNPLISKNF 592 (717)
Q Consensus 515 p~yiS~lnylRFfIPeLfPelDKVLYLD~DVIVqgDLseLwdiDL~Gk--viAAVeDc~~~f~ry~~YLNfSnP~i~~~f 592 (717)
|.+++.+-+.|=.+-. +|+.+-|.|||+|.+|..- -+++.+..+ .+-.+ |.+..-+. .
T Consensus 179 p~~WaKlpaLR~aM~~-~PeaEWiWWLDsDALImNm---sfelPlery~~~NlVi-------hg~~~~l~---------~ 238 (429)
T PLN03182 179 AGFWAKLPLLRKLMLA-HPEVEWIWWMDSDALFTDM---TFEIPLEKYEGYNLVI-------HGWDELVY---------D 238 (429)
T ss_pred CcchhHHHHHHHHHHH-CCCceEEEEecCCceeecC---CCCCCHhHcCCcCeee-------ccchhhhe---------e
Confidence 6778887777766644 6899999999999999862 122332211 01001 00111010 0
Q ss_pred CCCCCceeeeeeeeechHHHHhhHHHHHHHHHHhcc-----------------cccccccCCCCcccc---c----cccc
Q 005035 593 DPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMNH-----------------DRQLWKLGTLPPGLI---T----FWKR 648 (717)
Q Consensus 593 dp~~cyFNSGVLLIDL~kWRe~nITeky~~w~k~N~-----------------d~~L~dqGdLp~~Li---~----F~g~ 648 (717)
..+-.+.|+|+++|-.-.|--.= +..|..+.+ ++..+..++|..+.. . +.++
T Consensus 239 ~kdW~GLNtGsFLIRNcqWSldl----LDaWa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvyLl~~~~~~w~~k 314 (429)
T PLN03182 239 QKSWIGLNTGSFLIRNCQWSLDL----LDAWAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALVYLLLTQRERWGDK 314 (429)
T ss_pred ccccCccceeeEEEEcCHHHHHH----HHHHHhcCCCCchhhhHHHHHHHhhcCCCCCCcccHHHHHHHHHhcchhhccc
Confidence 12345899999999888876432 122433322 333444455443221 1 1223
Q ss_pred eeeccCccccccCC-------------CCCCCcccccCCCeEEEeeCCCCCcccCCccccHHHHHH
Q 005035 649 TYPLDRFWHVLGLG-------------YNPSVNQRDIERAAVIHYNGNMKPWLEINIPKYRNYWTK 701 (717)
Q Consensus 649 i~~LD~rWN~lgLG-------------y~~~is~e~ie~aaIIHYnG~~KPWl~~~~~~Yrd~Wwk 701 (717)
+ .|...|-+.|.. |.|+. .+-.-|.|.||+| .||....+...-...|..
T Consensus 315 v-~le~~y~l~Gyw~~iv~~yee~~~~~~~g~--gd~rwPfvtHF~G-ckpC~~~~~y~~~~C~~~ 376 (429)
T PLN03182 315 V-YLENSYYLHGYWVGLVDRYEEMMEKYHPGL--GDDRWPFVTHFVG-CKPCGGYGDYPVERCLKQ 376 (429)
T ss_pred e-EEeecceeccccHHHHHHHHHHHHhcCCCC--CCcccceeEeecc-ceecCCCCCcCHHHHHHH
Confidence 3 355555554421 11111 1123589999999 799976654334445543
No 26
>PLN03181 glycosyltransferase; Provisional
Probab=77.58 E-value=12 Score=42.93 Aligned_cols=35 Identities=20% Similarity=0.304 Sum_probs=26.6
Q ss_pred CCCccHhhhHHhhhhhhcCCCCeEEEEecCeeEecC
Q 005035 515 PKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKD 550 (717)
Q Consensus 515 p~yiS~lnylRFfIPeLfPelDKVLYLD~DVIVqgD 550 (717)
|..++.+-..|=.+-. +|+.+-|-|||.|++|..-
T Consensus 180 p~~WaKipalRaAM~a-~PeAEWfWWLDsDALIMNp 214 (453)
T PLN03181 180 NSYWAKLPVVRAAMLA-HPEAEWIWWVDSDAVFTDM 214 (453)
T ss_pred chhhhHHHHHHHHHHH-CCCceEEEEecCCceeecC
Confidence 5567766666644433 7999999999999999864
No 27
>PF10819 DUF2564: Protein of unknown function (DUF2564) ; InterPro: IPR020314 This entry contains proteins with no known function.
Probab=76.57 E-value=6.2 Score=35.43 Aligned_cols=69 Identities=22% Similarity=0.351 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHhhcccC--CCCCCchhHHHHHHHHHHHHHHhccCC--ccHHHHHHHHHHHHHHHHHHHHHHH
Q 005035 219 RELRLRIKEVQRALGDAT--KDSDLPRIANDRLKAMEQSLAKGKQIQ--DDCAAVVKKLRAMLHSTEEQLRVHK 288 (717)
Q Consensus 219 ~el~~~~~e~~~~~~~a~--~d~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~~~~~kl~~~~~~~e~~~~~~~ 288 (717)
+++...|+-.|+++|-|| .|+++-..|...++.-..-|..|++.. .| ..+...=.+.|...|-|+..+|
T Consensus 6 kQve~aVetAqkmvG~AT~smdp~~Le~A~qAve~Ar~ql~~a~~~at~lD-~~Fl~~~~~~L~~~eHQL~Eak 78 (79)
T PF10819_consen 6 KQVEMAVETAQKMVGQATMSMDPDQLEHATQAVEDAREQLSQAKSHATGLD-EPFLQQSEQLLDDCEHQLDEAK 78 (79)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-HHHHHHHHHHHHHHHHHHHHhc
Confidence 678889999999999999 677777888888888887788888655 33 3788888899999999998776
No 28
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=70.60 E-value=2.8 Score=43.77 Aligned_cols=22 Identities=23% Similarity=0.413 Sum_probs=12.6
Q ss_pred cCCCCeEEEEecCeeEecCchh
Q 005035 532 FPRLNKVLFLDDDVVVQKDLSG 553 (717)
Q Consensus 532 fPelDKVLYLD~DVIVqgDLse 553 (717)
+|+++-|+|||+|.+|..-=-+
T Consensus 74 ~P~~~wv~~lD~Dali~n~~~~ 95 (239)
T PF05637_consen 74 YPEAEWVWWLDSDALIMNPDFS 95 (239)
T ss_dssp -TT-SEEEEE-TTEEE------
T ss_pred CCCCCEEEEEcCCeEEEecccc
Confidence 4889999999999999764333
No 29
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=63.04 E-value=12 Score=41.43 Aligned_cols=28 Identities=11% Similarity=0.165 Sum_probs=24.2
Q ss_pred cCCCCeEEEEecCeeEecCchhhhccCC
Q 005035 532 FPRLNKVLFLDDDVVVQKDLSGLWSIDL 559 (717)
Q Consensus 532 fPelDKVLYLD~DVIVqgDLseLwdiDL 559 (717)
|.+.++++|+|+|+.+-.+....+++-.
T Consensus 122 ~~~~~a~i~~~~~i~~~~~~~~~~~v~~ 149 (369)
T KOG1950|consen 122 LIEDGAAIYLVDDIQRFRNDDANFDVPN 149 (369)
T ss_pred eeccCceEEEecchhhccCccccccccc
Confidence 4568999999999999999999998743
No 30
>COG4575 ElaB Uncharacterized conserved protein [Function unknown]
Probab=62.01 E-value=25 Score=33.17 Aligned_cols=75 Identities=19% Similarity=0.235 Sum_probs=58.9
Q ss_pred hHHHHHHHHHHHHHHHhhcccCCCCCCchhHHHHHHHHHHHHHHhccCCccH-HHHHHHHHHHHHHHHHHHHHHHHhh
Q 005035 215 ANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDC-AAVVKKLRAMLHSTEEQLRVHKKQT 291 (717)
Q Consensus 215 ~~~~~el~~~~~e~~~~~~~a~~d~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~kl~~~~~~~e~~~~~~~~~~ 291 (717)
.++.-||+.-+.++|.+|..+...+. .++.+.=...+..|.+++...-|- ..++.+-|++...||+-++.|-=|+
T Consensus 11 ~~l~~el~~L~d~lEevL~ssg~~a~--~e~~~lR~r~~~~Lk~~r~rl~~~~d~v~~~sk~a~~~tD~yV~e~PWq~ 86 (104)
T COG4575 11 DQLLAELQELLDTLEEVLKSSGSLAG--DEAEELRSKAESALKEARDRLGDTGDAVVQRSKAAADATDDYVRENPWQG 86 (104)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccchh--hHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHcCCchH
Confidence 67888999999999999998876653 234444446677777777665555 7899999999999999999887765
No 31
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=59.90 E-value=5.6 Score=42.13 Aligned_cols=37 Identities=27% Similarity=0.390 Sum_probs=29.8
Q ss_pred hhHHhhhhhhcCCCCeEEEEecCeeEecCchhhhccC
Q 005035 522 NHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSID 558 (717)
Q Consensus 522 nylRFfIPeLfPelDKVLYLD~DVIVqgDLseLwdiD 558 (717)
.|..=.+.-++-..+.||+||+|.|...|++.||+.+
T Consensus 78 ~~~~K~lA~l~ssFeevllLDaD~vpl~~p~~lF~~~ 114 (271)
T PF11051_consen 78 GFQNKWLALLFSSFEEVLLLDADNVPLVDPEKLFESE 114 (271)
T ss_pred CchhhhhhhhhCCcceEEEEcCCcccccCHHHHhcCc
Confidence 3344445666777999999999999999999999863
No 32
>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]
Probab=57.18 E-value=5.7 Score=44.79 Aligned_cols=31 Identities=35% Similarity=0.482 Sum_probs=23.0
Q ss_pred hhHHhhhhhhcCCCCeEEEEecCeeEecCchhhhc
Q 005035 522 NHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWS 556 (717)
Q Consensus 522 nylRFfIPeLfPelDKVLYLD~DVIVqgDLseLwd 556 (717)
+..|+.+=-=+-. ||||+||||.++++.|=+
T Consensus 229 dl~RLA~LyKYGG----vYLDTDvIvLksl~~l~N 259 (409)
T KOG1928|consen 229 DLSRLALLYKYGG----VYLDTDVIVLKSLSNLRN 259 (409)
T ss_pred HHHHHHHHHHhCC----EEeeccEEEecccccccc
Confidence 3567765332333 899999999999999874
No 33
>PRK10132 hypothetical protein; Provisional
Probab=49.22 E-value=76 Score=30.02 Aligned_cols=76 Identities=9% Similarity=0.083 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHHHHHHhhcccCCCCCCchhHHHHHHHHHHHHHHhccCCccHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 005035 215 ANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTL 292 (717)
Q Consensus 215 ~~~~~el~~~~~e~~~~~~~a~~d~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~~~~ 292 (717)
+++..||+.=+.++|.+|.++..++. ..+.+.=...+..|..++....|-..+..+.|.....+++.++.+--|+.
T Consensus 15 e~L~~Dl~~L~~~le~ll~~~~~~~~--~~~~~lR~r~~~~L~~ar~~l~~~~~~~~~~~~a~~~~~~~V~~~Pw~sv 90 (108)
T PRK10132 15 QDIQNDVNQLADSLESVLKSWGSDAK--GEAEAARRKAQALLKETRARMHGRTRVQQAARDAVGCADTFVRERPWCSV 90 (108)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhH--HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 68889999999999998877765542 23433334667778888766666667778889999999999998877764
No 34
>TIGR02977 phageshock_pspA phage shock protein A. Members of this family are the phage shock protein PspA, from the phage shock operon. This is a narrower family than the set of PspA and its homologs, sometimes several in a genome, as described by PFAM model pfam04012. PspA appears to maintain the protonmotive force under stress conditions that include overexpression of certain phage secretins, heat shock, ethanol, and protein export defects.
Probab=48.98 E-value=30 Score=35.68 Aligned_cols=107 Identities=12% Similarity=0.122 Sum_probs=75.6
Q ss_pred CCchhHHHHhhhhHHHHHhhc--cccccCCchHHHHHHHHHHHHHHHhhcccC--CCCCCchhHHHHHHHHHHHHHHhcc
Q 005035 186 TPPDFRVRQLKDQLIKAKVYL--SLPAMRNNANFVRELRLRIKEVQRALGDAT--KDSDLPRIANDRLKAMEQSLAKGKQ 261 (717)
Q Consensus 186 ~~~d~~~~~~~dq~~~a~~y~--~~~~~~~~~~~~~el~~~~~e~~~~~~~a~--~d~~~~~~~~~~~~~~~~~~~~~~~ 261 (717)
.+-|-.++.|+++|..||.=+ .+|..+.-.+=..++..++.+.+.--..|- .+.||-+.+..+....++.+...+.
T Consensus 27 ~~l~q~irem~~~l~~ar~~lA~~~a~~k~~e~~~~~~~~~~~~~~~~A~~Al~~G~EdLAr~Al~~k~~~~~~~~~l~~ 106 (219)
T TIGR02977 27 KMIRLIIQEMEDTLVEVRTTSARTIADKKELERRVSRLEAQVADWQEKAELALSKGREDLARAALIEKQKAQELAEALER 106 (219)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467889999999999988743 333333333344556666666653222222 3556888888888888888888887
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 005035 262 IQDDCAAVVKKLRAMLHSTEEQLRVHKKQTL 292 (717)
Q Consensus 262 ~~~d~~~~~~kl~~~~~~~e~~~~~~~~~~~ 292 (717)
....-...+.+|+.-|..+|.++...+.+..
T Consensus 107 ~~~~~~~~v~~l~~~l~~L~~ki~~~k~k~~ 137 (219)
T TIGR02977 107 ELAAVEETLAKLQEDIAKLQAKLAEARARQK 137 (219)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788888999999999999999887665433
No 35
>PRK10807 paraquat-inducible protein B; Provisional
Probab=41.69 E-value=77 Score=37.42 Aligned_cols=19 Identities=21% Similarity=0.422 Sum_probs=13.0
Q ss_pred CCchhHHHHHHHHHHHHHH
Q 005035 240 DLPRIANDRLKAMEQSLAK 258 (717)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~ 258 (717)
.||.++.+-|+.++++++.
T Consensus 473 ~Lp~~L~~TL~~l~~~l~~ 491 (547)
T PRK10807 473 QLPADMQKTLRELNRSMQG 491 (547)
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 4666677777777777765
No 36
>PF04012 PspA_IM30: PspA/IM30 family; InterPro: IPR007157 This family includes PspA a protein that suppresses sigma54-dependent transcription. The PspA protein, a negative regulator of the Escherichia coli phage shock psp operon, is produced when virulence factors are exported through secretins in many Gram-negative pathogenic bacteria and its homologue in plants, VIPP1, plays a critical role in thylakoid biogenesis, essential for photosynthesis. Activation of transcription by the enhancer-dependent bacterial sigma54-containing RNA polymerase occurs through ATP hydrolysis-driven protein conformational changes enabled by activator proteins that belong to the large AAA(+) mechanochemical protein family. It has been shown that PspA directly and specifically acts upon and binds to the AAA(+) domain of the PspF transcription activator [].
Probab=40.90 E-value=80 Score=32.18 Aligned_cols=106 Identities=23% Similarity=0.232 Sum_probs=76.0
Q ss_pred CCchhHHHHhhhhHHHHHhhc--cccccCCchHHHHHHHHHHHHHHHhhcccC--CCCCCchhHHHHHHHHHHHHHHhcc
Q 005035 186 TPPDFRVRQLKDQLIKAKVYL--SLPAMRNNANFVRELRLRIKEVQRALGDAT--KDSDLPRIANDRLKAMEQSLAKGKQ 261 (717)
Q Consensus 186 ~~~d~~~~~~~dq~~~a~~y~--~~~~~~~~~~~~~el~~~~~e~~~~~~~a~--~d~~~~~~~~~~~~~~~~~~~~~~~ 261 (717)
.+-|-.+|.|.++|..|+.=+ .++....-.+=..++...+.+.+.-...|. .+.||-+.+..+....+..+...+.
T Consensus 26 ~~l~q~ird~e~~l~~a~~~~a~~~a~~~~le~~~~~~~~~~~~~~~~A~~Al~~g~edLAr~al~~k~~~e~~~~~l~~ 105 (221)
T PF04012_consen 26 KMLEQAIRDMEEQLRKARQALARVMANQKRLERKLDEAEEEAEKWEKQAELALAAGREDLAREALQRKADLEEQAERLEQ 105 (221)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567888999999999988733 333222223333445555555554333332 4556888999999999999999999
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 005035 262 IQDDCAAVVKKLRAMLHSTEEQLRVHKKQT 291 (717)
Q Consensus 262 ~~~d~~~~~~kl~~~~~~~e~~~~~~~~~~ 291 (717)
.......-+.+|+.-+..+|.++...+.+-
T Consensus 106 ~~~~~~~~~~~l~~~l~~l~~kl~e~k~k~ 135 (221)
T PF04012_consen 106 QLDQAEAQVEKLKEQLEELEAKLEELKSKR 135 (221)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999988766543
No 37
>PF04488 Gly_transf_sug: Glycosyltransferase sugar-binding region containing DXD motif ; InterPro: IPR007577 This entry represents those sugar-binding regions of glycosyltransferases that contain a DXD motif. The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases [].
Probab=39.12 E-value=23 Score=31.86 Aligned_cols=37 Identities=24% Similarity=0.433 Sum_probs=29.4
Q ss_pred CCCccHhhhHHhhhhhhcCCCCeEEEEecCeeEecCc-hhhh
Q 005035 515 PKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDL-SGLW 555 (717)
Q Consensus 515 p~yiS~lnylRFfIPeLfPelDKVLYLD~DVIVqgDL-seLw 555 (717)
+.+.....++|+.+=...-. ||+|.|+++.+++ +.+-
T Consensus 60 ~~~~~~sD~~R~~~L~~~GG----iY~D~D~~~~rpl~~~~~ 97 (103)
T PF04488_consen 60 PNYAHKSDLLRYLVLYKYGG----IYLDLDVICLRPLDDPWL 97 (103)
T ss_pred cchHHHHHHHHHHHHHHcCc----EEEeCccccCcchhhhhh
Confidence 34555677899999777776 9999999999999 5543
No 38
>PF06103 DUF948: Bacterial protein of unknown function (DUF948); InterPro: IPR009293 This family consists of bacterial sequences several of which are thought to be general stress proteins.
Probab=36.16 E-value=75 Score=28.10 Aligned_cols=62 Identities=11% Similarity=0.269 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCchhHHHHHHHHHHHHHHhccCCccHHHHHHHHHHHHHHHHHHH
Q 005035 217 FVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQL 284 (717)
Q Consensus 217 ~~~el~~~~~e~~~~~~~a~~d~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~kl~~~~~~~e~~~ 284 (717)
+.+.+++-++++++.+.... +++.+..+.++.++.++.+...|+.....++..+.++.++=-
T Consensus 20 ~l~~l~~~l~~~~~ti~~l~------~~~~~i~~e~~~ll~~~n~l~~dv~~k~~~v~~~~~~v~~~g 81 (90)
T PF06103_consen 20 VLKKLKKTLDEVNKTIDTLQ------EQVDPITKEINDLLHNTNELLEDVNEKLEKVDPVFEAVADLG 81 (90)
T ss_pred HHHHHHHHHHHHHHHHHHHH------HhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 34556666666666655433 346777888999999999999999999999888888776643
No 39
>PRK10404 hypothetical protein; Provisional
Probab=31.06 E-value=2e+02 Score=26.82 Aligned_cols=79 Identities=10% Similarity=0.114 Sum_probs=53.1
Q ss_pred CCchHHHHHHHHHHHHHHHhhcccCCCCCCchhHHHHHHHHHHHHHHhccCCccHH-HHHHHHHHHHHHHHHHHHHHHHh
Q 005035 212 RNNANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCA-AVVKKLRAMLHSTEEQLRVHKKQ 290 (717)
Q Consensus 212 ~~~~~~~~el~~~~~e~~~~~~~a~~d~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~kl~~~~~~~e~~~~~~~~~ 290 (717)
...+++..||+.=+.++|.++..+..++. ..+.+.=...+..|..++....|.. .+..+.|++...+++-++.|--|
T Consensus 5 ~~~~~l~~dl~~L~~dle~Ll~~~~~~a~--e~~~~lR~r~~~~L~~ar~~l~~~~~~~~~~~k~aa~~td~yV~e~Pw~ 82 (101)
T PRK10404 5 FGDTRIDDDLTLLSETLEEVLRSSGDPAD--QKYVELKARAEKALDDVKKRVSQASDSYYYRAKQAVYRADDYVHEKPWQ 82 (101)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHhhhhhH--HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCcHH
Confidence 45678889999999999999987775531 1222222345556666663333333 34556899999999999988777
Q ss_pred hH
Q 005035 291 TL 292 (717)
Q Consensus 291 ~~ 292 (717)
+.
T Consensus 83 av 84 (101)
T PRK10404 83 GI 84 (101)
T ss_pred HH
Confidence 54
No 40
>PRK10698 phage shock protein PspA; Provisional
Probab=28.84 E-value=98 Score=32.35 Aligned_cols=103 Identities=14% Similarity=0.181 Sum_probs=71.3
Q ss_pred CCchhHHHHhhhhHHHHHhhc--cccccCCchHHHHHHHHHHHHHHH----hhcccCCCCCCchhHHHHHHHHHHHHHHh
Q 005035 186 TPPDFRVRQLKDQLIKAKVYL--SLPAMRNNANFVRELRLRIKEVQR----ALGDATKDSDLPRIANDRLKAMEQSLAKG 259 (717)
Q Consensus 186 ~~~d~~~~~~~dq~~~a~~y~--~~~~~~~~~~~~~el~~~~~e~~~----~~~~a~~d~~~~~~~~~~~~~~~~~~~~~ 259 (717)
.|-+-.++.|+|++..+|.=+ .+|..+.-.+=..++..++.+.++ +|.. .+-||-+.|..+-+..+..++..
T Consensus 27 k~l~q~i~em~~~l~~~r~alA~~~A~~k~~er~~~~~~~~~~~~e~kA~~Al~~--G~EdLAr~AL~~K~~~~~~~~~l 104 (222)
T PRK10698 27 KLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQAEAQQVEWQEKAELALRK--EKEDLARAALIEKQKLTDLIATL 104 (222)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHH
Confidence 467888999999999887632 333333233333445555555543 3322 35568888777777788888888
Q ss_pred ccCCccHHHHHHHHHHHHHHHHHHHHHHHHh
Q 005035 260 KQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQ 290 (717)
Q Consensus 260 ~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~~ 290 (717)
+.........+.+|+..+..++.++...+.+
T Consensus 105 ~~~~~~~~~~~~~L~~~l~~L~~ki~eak~k 135 (222)
T PRK10698 105 EHEVTLVDETLARMKKEIGELENKLSETRAR 135 (222)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877888899999999999999988876543
No 41
>PF05957 DUF883: Bacterial protein of unknown function (DUF883); InterPro: IPR010279 This family consists of several bacterial proteins of unknown function that include the Escherichia coli genes for ElaB, YgaM and YqjD.
Probab=23.39 E-value=2.5e+02 Score=25.09 Aligned_cols=76 Identities=16% Similarity=0.182 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCCCchhHHHHHHHHHHHHHHhccCCcc-HHHHHHHHHHHHHHHHHHHHHHHHhhHH
Q 005035 216 NFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDD-CAAVVKKLRAMLHSTEEQLRVHKKQTLF 293 (717)
Q Consensus 216 ~~~~el~~~~~e~~~~~~~a~~d~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~kl~~~~~~~e~~~~~~~~~~~~ 293 (717)
++..||.+-+.+++.++..+...+. ..+.+.-..++..+..+++.-.| ...+..+.+.....+|+.++.|--++.-
T Consensus 2 ~l~~~l~~l~~d~~~l~~~~~~~~~--~~~~~~r~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~V~e~P~~svg 78 (94)
T PF05957_consen 2 DLKAELEQLRADLEDLARSAADLAG--EKADEARDRAEEALDDARDRAEDAADQAREQAREAAEQTEDYVRENPWQSVG 78 (94)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHChHHHHH
Confidence 4556666666666666655543321 12222222333344443333222 2357788899999999999999888753
No 42
>KOG2391 consensus Vacuolar sorting protein/ubiquitin receptor VPS23 [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=22.79 E-value=1.7e+02 Score=33.02 Aligned_cols=47 Identities=21% Similarity=0.181 Sum_probs=36.2
Q ss_pred HHHHHHhccCCccHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhh
Q 005035 253 EQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTA 299 (717)
Q Consensus 253 ~~~~~~~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~~~~~~~~l~~ 299 (717)
-..++.-|+...+.+.-.+||++|...+|.|+....++...|+.--.
T Consensus 231 ~aeq~slkRt~EeL~~G~~kL~~~~etLEqq~~~L~~niDIL~~k~~ 277 (365)
T KOG2391|consen 231 QAEQESLKRTEEELNIGKQKLVAMKETLEQQLQSLQKNIDILKSKVR 277 (365)
T ss_pred HHHHHHHHhhHHHHHhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 33344445556677778899999999999999999999998765443
No 43
>KOG4748 consensus Subunit of Golgi mannosyltransferase complex [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=22.01 E-value=3.3e+02 Score=31.06 Aligned_cols=36 Identities=19% Similarity=0.369 Sum_probs=27.3
Q ss_pred CCCccHhhhHHhhhhhhcCCCCeEEEEecCeeEecCc
Q 005035 515 PKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDL 551 (717)
Q Consensus 515 p~yiS~lnylRFfIPeLfPelDKVLYLD~DVIVqgDL 551 (717)
+.+++.+=..|=-+-+ +|+.+-|=+||.|.++..--
T Consensus 157 ~~~W~KiP~Ir~tM~k-yP~AeWIWWlD~DAlimn~~ 192 (364)
T KOG4748|consen 157 PGVWAKLPAIRQTMLK-YPDAEWIWWLDQDALIMNPD 192 (364)
T ss_pred cchhHHhHHHHHHHHH-CCCCcEEEEecccchhhCcc
Confidence 5567766666655555 69999999999999987643
No 44
>cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars. Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides.
Probab=21.63 E-value=3.2e+02 Score=26.56 Aligned_cols=22 Identities=32% Similarity=0.439 Sum_probs=19.2
Q ss_pred CCeEEEEecCeeEecCchhhhc
Q 005035 535 LNKVLFLDDDVVVQKDLSGLWS 556 (717)
Q Consensus 535 lDKVLYLD~DVIVqgDLseLwd 556 (717)
-+-++.+.+|+++..|+.++.+
T Consensus 96 ~~~~lv~~~D~~~~~~~~~~~~ 117 (217)
T cd04181 96 DDDFLVVNGDVLTDLDLSELLR 117 (217)
T ss_pred CCCEEEEECCeecCcCHHHHHH
Confidence 4779999999999999988764
No 45
>COG1842 PspA Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms]
Probab=21.02 E-value=1.3e+02 Score=31.87 Aligned_cols=102 Identities=20% Similarity=0.261 Sum_probs=68.0
Q ss_pred CCchhHHHHhhhhHHHHHhhccccccCCc-hHHHH---HHHHHHHHHHH----hhcccCCCCCCchhHHHHHHHHHHHHH
Q 005035 186 TPPDFRVRQLKDQLIKAKVYLSLPAMRNN-ANFVR---ELRLRIKEVQR----ALGDATKDSDLPRIANDRLKAMEQSLA 257 (717)
Q Consensus 186 ~~~d~~~~~~~dq~~~a~~y~~~~~~~~~-~~~~~---el~~~~~e~~~----~~~~a~~d~~~~~~~~~~~~~~~~~~~ 257 (717)
.+-|-.+|.|+++|..||-=+ |+.-.+ -.|-+ ++..++.+.|. +|. ..+-+|-+.+..+.+..+..+.
T Consensus 27 ~~l~Q~ird~~~~l~~ar~~~--A~~~a~~k~~e~~~~~~~~~~~k~e~~A~~Al~--~g~E~LAr~al~~~~~le~~~~ 102 (225)
T COG1842 27 KMLEQAIRDMESELAKARQAL--AQAIARQKQLERKLEEAQARAEKLEEKAELALQ--AGNEDLAREALEEKQSLEDLAK 102 (225)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHHHH
Confidence 567788888888888877532 222222 23333 34444444442 222 2345577888888888888887
Q ss_pred HhccCCccHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 005035 258 KGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQT 291 (717)
Q Consensus 258 ~~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~~~ 291 (717)
.-++....-...+.+||..+..+|.++...+.+-
T Consensus 103 ~~~~~~~~~~~~~~~l~~~~~~Le~Ki~e~~~~~ 136 (225)
T COG1842 103 ALEAELQQAEEQVEKLKKQLAALEQKIAELRAKK 136 (225)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777788889999999999998887665543
No 46
>PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents a family of proteins which appears to have a highly conserved zinc finger domain at the C-terminal end, described as -C-X2-CH-X3-H-X5-C-X2-C-. The structure is predicted to contain a coiled coil. Members of this family are annotated as being tumour-associated antigen HCA127 in humans, but this could not be confirmed.
Probab=21.00 E-value=1.6e+02 Score=31.28 Aligned_cols=115 Identities=12% Similarity=0.234 Sum_probs=73.2
Q ss_pred hhHHHHHhhccccccCCchHHHHHHHHHHHHHHHhhcccCCCCCCchhHHHHHHHHHHHHHHhccCCccHHHHHHHHHHH
Q 005035 197 DQLIKAKVYLSLPAMRNNANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAM 276 (717)
Q Consensus 197 dq~~~a~~y~~~~~~~~~~~~~~el~~~~~e~~~~~~~a~~d~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~kl~~~ 276 (717)
=+-..++.+-.+...++.+.+..|++..+.++. .|-..-.+--+.++.-+..||..|..+++-.......+.++..-
T Consensus 13 lek~k~~i~~e~~~~e~ee~~L~e~~kE~~~L~---~Er~~h~eeLrqI~~DIn~lE~iIkqa~~er~~~~~~i~r~~ee 89 (230)
T PF10146_consen 13 LEKLKNEILQEVESLENEEKCLEEYRKEMEELL---QERMAHVEELRQINQDINTLENIIKQAESERNKRQEKIQRLYEE 89 (230)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556667788888888899999888777664 11111111123466667889999999998777777777777777
Q ss_pred HHHHHHHHHHHHHhhHHHHHhhhccCCCccccccccchhhHhh
Q 005035 277 LHSTEEQLRVHKKQTLFLTQLTAKTLPKGLHCLPLRLTTEYYT 319 (717)
Q Consensus 277 ~~~~e~~~~~~~~~~~~~~~l~~~~~pk~~hcl~~rl~~e~~~ 319 (717)
+.-+-+++...++.. ++-..||-..-=-...++.+||.
T Consensus 90 y~~Lk~~in~~R~e~-----lgl~~Lp~l~eE~~~~~~~~~~~ 127 (230)
T PF10146_consen 90 YKPLKDEINELRKEY-----LGLEPLPSLEEEELSKISPDYLQ 127 (230)
T ss_pred HHHHHHHHHHHHHHH-----cCCCCCCccccccccccCHHHhh
Confidence 777777777776653 34444443321112345555665
No 47
>PLN02829 Probable galacturonosyltransferase
Probab=20.69 E-value=7.5e+02 Score=30.27 Aligned_cols=69 Identities=20% Similarity=0.205 Sum_probs=49.3
Q ss_pred CchHHHHHHHHHHHHHHHhhcccCCCCC--CchhHHHHHHHHHHHHHHhccCCccHHHHHHHHHHHHHHHH
Q 005035 213 NNANFVRELRLRIKEVQRALGDATKDSD--LPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTE 281 (717)
Q Consensus 213 ~~~~~~~el~~~~~e~~~~~~~a~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~kl~~~~~~~e 281 (717)
....++|.||-+|--..--++=|...+. |-++...+|+..+.+|..|-.-.+=-..+..|+++|=+.+.
T Consensus 180 ~~d~~v~~lkDql~~AkaY~~iak~~~~~~l~~el~~~i~e~~r~l~~a~~d~~lp~~~~~~~~~m~~~i~ 250 (639)
T PLN02829 180 MPDARVRQLRDQLIKAKVYLSLPATKANPHFTRELRLRIKEVQRVLGDASKDSDLPKNANEKLKAMEQTLA 250 (639)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHhhccCCCCCChhHHHHHHHHHHHHH
Confidence 3456889999998877766666664443 77999999999999999987633333456666666654443
Done!