BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005036
(717 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94B71|OBE3_ARATH Protein OBERON 3 OS=Arabidopsis thaliana GN=OBE3 PE=1 SV=1
Length = 733
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/720 (57%), Positives = 505/720 (70%), Gaps = 88/720 (12%)
Query: 2 DSSSQDEKWVERDFLNLNESGVNSSSPKRQAEEEVEEFQGENVTTNREKRPKLETLNLSL 61
++SS D+KWVERDF NL E NSS KR+A EE + E +K K+ETLNLSL
Sbjct: 98 ENSSYDDKWVERDFFNLREMNPNSS--KRKAHEE----EEEAEEEEDKKSNKIETLNLSL 151
Query: 62 SLPDVSLSLTASNALQNNVERPMPTRSIQSLAPSRDNTCSNDFTAA--SLSYSYSHPFSH 119
+LPDVSLSLTASNA V+RP S ++ + SNDFTA S+SYSYSHPFSH
Sbjct: 152 ALPDVSLSLTASNA----VKRPRVVTSERTTT-----SFSNDFTATAPSMSYSYSHPFSH 202
Query: 120 NPSCSLTHNSTEYYEYSVGRDDQIWCGGEGTNGSVHSRFRPIGDGSVALNNHGGGGGGGG 179
N SCS+T NST++ + SVG+DD IWC GEGTNGSVHSRFRPIGDG VAL N+ G
Sbjct: 203 NISCSMTRNSTDF-DCSVGKDDHIWCAGEGTNGSVHSRFRPIGDGGVALANNPVSG---- 257
Query: 180 FSMIQGSRVMNKDSCNNSLYKTTSSDNLSFFPSELPARPRVE-TNSGDSRKKDSENLRGL 238
K +SS + SFFPSELPARP E T SGDSRKK + L
Sbjct: 258 --------------------KPSSSADYSFFPSELPARPGNEVTISGDSRKK----VANL 293
Query: 239 ESMDGGRARKLSRPERILREIVSEAIPIMAQIIQELSDETLESVKEYLKNLFLMSEKREE 298
E D R+ ER+L +IVS++I +A IIQ ++DETLES KEYL+NL EK+E+
Sbjct: 294 EDNDAVRS------ERVLYDIVSKSISSVALIIQGMADETLESAKEYLRNLIDSPEKKEK 347
Query: 299 LMALKKRLERRSDLSKETLSKCHKDQLAILVAVKMGLGSFLSAKIQLPVNKLVEIFLYMR 358
L+ L+ ++++RSDLSKETLSKC KDQL ILVAV+ GL FLS KI++P+N+LVEIFL++R
Sbjct: 348 LVNLQNQIDKRSDLSKETLSKCVKDQLDILVAVRTGLKYFLSGKIRIPMNELVEIFLFLR 407
Query: 359 CRNVNCQSILPVDDCDCKICSTNKGFCSSCMCPVCLNFDCANNTCSWVGCDVCSHWCHAA 418
CRNVNC+S+LPVDDC+CKICS NKGFCSSCMCPVCL FD A+NTCSWVGCDVCSHWCHAA
Sbjct: 408 CRNVNCKSLLPVDDCECKICSNNKGFCSSCMCPVCLRFDSASNTCSWVGCDVCSHWCHAA 467
Query: 419 CGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGHASEMFGFVKDVFLHCAKDWGLDTFVKEL 478
CGIQ+NLIKPG SLKG GT+EM FHCIGC H SEMFGFVKDVF+ CAK+WGL+T +KEL
Sbjct: 468 CGIQKNLIKPGHSLKGQRGTTEMMFHCIGCAHKSEMFGFVKDVFVCCAKNWGLETLIKEL 527
Query: 479 DCVTKIFKGSNDFKGKELQKKAAELVSKLENKVMSPSEACNFIIRFFNNADSMSDFTASG 538
DCV K+F+GS+D KGK L KA E+V KLE+K +SP +A NFII+FFN A+S+ +
Sbjct: 528 DCVRKVFRGSDDAKGKALHLKANEMVKKLESKQISPLDASNFIIQFFNYAESIPEIPDPP 587
Query: 539 TSLNDLIVTQASVQKDAIPIPPATSLPPKYTIYNMTSSSGRRDSMSNDLFKKDLIGDLKV 598
L + + S +KD + P+TS K + +T D+M N
Sbjct: 588 RELT--VAAETSYRKDEASVTPSTSKDQKKKSFALT------DAMMN------------- 626
Query: 599 EDEIRFGKLSKNDGFDSLESVVRIKEAEARMFQNKADEARREADEYKRMVCARTEKLEEE 658
FDSLES+VRIKEAE RMFQ KADEAR EA+ +KRM+ +TEK+EEE
Sbjct: 627 -------------SFDSLESMVRIKEAETRMFQKKADEARIEAESFKRMIEMKTEKMEEE 673
Query: 659 YAHKLSKLCLRETEERRRKKLEELKVLEDSHCDYLKMK-RMQAEIAGLLERMEATKQQWV 717
Y KL++LCL+ETEERRR KLEELK LE+SHCDY MK RM+AEIAGLL+RME T+QQ V
Sbjct: 674 YTEKLARLCLQETEERRRNKLEELKKLENSHCDYRNMKLRMEAEIAGLLKRMEVTRQQLV 733
>sp|Q84TI3|OBE4_ARATH Protein OBERON 4 OS=Arabidopsis thaliana GN=OBE4 PE=1 SV=2
Length = 1162
Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust.
Identities = 259/727 (35%), Positives = 400/727 (55%), Gaps = 75/727 (10%)
Query: 25 SSSPKRQAEEEVEEFQGENVTTNREKRPKLETLNLSLSLPDVSLSLTASNALQNNVERPM 84
SSSP R+A++ + V +++++ LE L+LSLSLPDV L + + N + P+
Sbjct: 470 SSSPVRRAKKT----EQSGVNKHKDEKLLLEPLDLSLSLPDVLLPIGGQDT--NQLGSPV 523
Query: 85 PTRSIQSLAPSRDNTCSN-DFTAASLSYSYSHPFSHNPSCSLTHNSTEYYEYSVGRDDQI 143
+ S++SL D C+N D S+S+S S F+HNPSCSL+HN +G ++Q
Sbjct: 524 RSGSVRSLT---DTFCTNSDGFTMSMSFSGSRSFNHNPSCSLSHN--------IGDNEQ- 571
Query: 144 WCGGEGTNGSVHSR--FRPIGDGSVALNNHG------------GGGGGGGFSMIQGSRVM 189
SVHSR F+ I +++ N+ G G ++G+ +
Sbjct: 572 ---------SVHSRPIFQGIDWQALSHNDSKYNENTVYQRLMENGNGSVQPRAMKGNLIS 622
Query: 190 NKDSCNNSLYKTTSSDNLSFFPSELPARPRVETNSGDSRKKDSEN--------------- 234
+ + SS + +L + V+ S R EN
Sbjct: 623 GQADEEHLRLPDGSSKAANILEKQLSFQKSVDVRSACPRTGSLENGSKFTVEKKTAKDFY 682
Query: 235 ------LRGLESMDGGRARKLSRPERILREIVSEAIPIMAQIIQELSDETLESVKEYLKN 288
+ GLE+ GG E ++R I+S+++P+M + E+ + S+KE ++
Sbjct: 683 SGSNSWITGLEA--GGH----DFVETVIRYILSDSMPVMTKRFHEMPTRNITSLKENIRQ 736
Query: 289 LFLMSEKREELMALKKRLERRSDLSKETLSKCHKDQLAILVAVKMGLGSFLSAKIQLPVN 348
+ L +K +L A + L+ R+D++ E L+K H+ QL ILVA+K G FL + +
Sbjct: 737 MMLNMDKNVQLGAFQDALQNRTDITLELLTKSHRAQLEILVALKSGRSDFLLLDNSISSS 796
Query: 349 KLVEIFLYMRCRNVNCQSILPVDDCDCKICSTNKGFCSSCMCPVCLNFDCANNTCSWVGC 408
L EIF+ MRC+N++C+ +LPVD+CDC++CS GFCS+CMC VC NFD A+NTCSWVGC
Sbjct: 797 HLAEIFMNMRCKNLSCRVLLPVDECDCRVCSRKDGFCSACMCLVCSNFDMASNTCSWVGC 856
Query: 409 DVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGHASEMFGFVKDVFLHCAKD 468
DVC HWCH CGI+ + I+ G + G G +EMQFHC+ C H SEMFGFVK+VFL+ A++
Sbjct: 857 DVCLHWCHTDCGIKESYIRNGINASGAPGMTEMQFHCVACNHPSEMFGFVKEVFLNFARE 916
Query: 469 WGLDTFVKELDCVTKIFKGSNDFKGKELQKKAAELVSKLENKVMSPSEACNFIIRFFNNA 528
W + F KEL+ V KIF S D +GK+L++ A +++ L++K++ EACN I+ F ++
Sbjct: 917 WKFERFCKELEYVNKIFSSSKDSRGKQLRQAADAMLASLKSKLIGLPEACNRILGFISDC 976
Query: 529 DSMSDFTASGTSLNDLIVTQASVQKDAIPIPPATSLPPKYTIYNMTSSSGRRDSMSNDLF 588
DS + S I Q + + T+ N + R S+++
Sbjct: 977 DSSTPAETSAP----FIYEQPKPRHERGSPSQDTAWLRSVCSDNPHNQLKRSASVADAFH 1032
Query: 589 KKDLIGDLKVEDEIRFGKLSKNDGFDSLESVVRIKEAEARMFQNKADEARREADEYKRMV 648
++ + VE E+ G K F+ LES+VR+K+AEA MFQ +AD+ARREA+ KR+
Sbjct: 1033 RERQVEICAVEMELERGS-PKEPRFEELESIVRMKQAEAEMFQGRADDARREAEGLKRIA 1091
Query: 649 CARTEKLEEEYAHKLSKLCLRETEERRRKKLEELKVLEDSHCD-YLKMKRMQAEIAGLLE 707
A+ EK+EEEY ++ KL + + +ERRR++ EEL+ ++ + Y RM+ E+ GLL
Sbjct: 1092 IAKKEKIEEEYNRRMGKLSMEDAQERRRRRYEELEAMQRGQREFYEMKMRMEEEMRGLLT 1151
Query: 708 RMEATKQ 714
+ME TKQ
Sbjct: 1152 KMEMTKQ 1158
>sp|Q84N38|PVIP_NICBE OBERON-like protein OS=Nicotiana benthamiana GN=PVIP PE=1 SV=1
Length = 549
Score = 306 bits (785), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 166/436 (38%), Positives = 242/436 (55%), Gaps = 6/436 (1%)
Query: 256 LREIVSEAIPIMAQIIQELSDETLESVKEYLKNLFLM---SEKREELMALKKRLERRSDL 312
LR+I E + ++A+ ++ L DE LE K L+ + ++ REE + L++ + R DL
Sbjct: 90 LRDIARERVDVIAERMRNLPDEYLEKFKHELRVILEGLGGAQHREEFLFLQRLVNSRGDL 149
Query: 313 SKETLSKCHKDQLAILVAVKMGLGSFLSAKIQLPVNKLVEIFLYMRCRNVNCQSILPVDD 372
+ TL H+ QL ILVA+K G+ +FL + L L++IFLY RCRN+ C S+LP ++
Sbjct: 150 TDGTLIITHRTQLEILVAIKTGIQAFLHPSVSLSQASLIDIFLYKRCRNIACGSMLPAEE 209
Query: 373 CDCKICSTNKGFCSSCMCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSL 432
C C+IC+ GFC+ CMC +C FD N+C W+GCD+CSHW H C I I GPS+
Sbjct: 210 CSCEICAKKNGFCNLCMCVICYKFDFEVNSCRWIGCDLCSHWTHTDCAISNGQIGTGPSV 269
Query: 433 KGPSGTSEMQFHCIGCGHASEMFGFVKDVFLHCAKDWGLDTFVKELDCVTKIFKGSNDFK 492
K + ++E F C C SE+ G+VKDVF HCA W + FV+ELD V +IF+ S D +
Sbjct: 270 KNGASSAETLFRCHACSRTSELLGWVKDVFQHCAPSWDAEAFVRELDYVRRIFQRSEDAR 329
Query: 493 GKELQKKAAELVSKLENKVMSPSEACNFIIRFFNNADSMSDFTASGTSLNDLIVTQASVQ 552
G++L K EL+ KL+N V P AC I+ FF D + LI + +
Sbjct: 330 GRKLFWKCEELIEKLKNGVADPM-ACKVILSFFQELDVDPSKSQDNDEGGRLIAPEEAFN 388
Query: 553 KDAIPIPPATSLPPKYTIYNMTSSSGRRDSMSNDLFKKDLIGDLKVEDEIRFGKLSKNDG 612
K A + A M R ++ D ++L + ++ + K
Sbjct: 389 KIADVVQEAIRKMEAVAEEKMRMVKKAR--LALDACDQELKDKAREVTSLKMERQRKKQQ 446
Query: 613 FDSLESVVRIKEAEARMFQNKADEARREADEYKRMVCARTEKLEEEYAHKLSKLCLRETE 672
D LES+VR+K+AEA MF KA EARREA+ +R+ A+TEK EE+YA + K L E E
Sbjct: 447 IDELESIVRLKQAEADMFDLKAGEARREAERLQRIALAKTEKSEEDYASRYLKQRLSEAE 506
Query: 673 ERRRKKLEELKVLEDS 688
++ E++K+ E S
Sbjct: 507 AEKQYLFEKIKLQESS 522
>sp|Q9LUB7|OBE2_ARATH Protein OBERON 2 OS=Arabidopsis thaliana GN=OBE2 PE=1 SV=1
Length = 574
Score = 302 bits (774), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 166/436 (38%), Positives = 253/436 (58%), Gaps = 6/436 (1%)
Query: 256 LREIVSEAIPIMAQIIQELSDETLESVKEYLKNLFL--MSEKREELMALKKRLERRSDLS 313
+R+I E + ++A+ + L DE L+ +K LK++ +++ +E M L+K ++ R+DLS
Sbjct: 93 VRDIARERVELVAERMHRLPDEFLDELKNGLKSILEGNVAQSVDEFMFLQKVVQSRTDLS 152
Query: 314 KETLSKCHKDQLAILVAVKMGLGSFLSAKIQLPVNKLVEIFLYMRCRNVNCQSILPVDDC 373
TL + H+ QL ILVA+ G+ +FL I L L+EIF+Y RCRN+ CQ+ LP DDC
Sbjct: 153 SVTLVRAHRVQLEILVAINTGIQAFLHPNISLSQPSLIEIFVYKRCRNIACQNQLPADDC 212
Query: 374 DCKICSTNKGFCSSCMCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLK 433
C IC+ KGFC+ CMC +C FD + NTC W+GCD+CSHW H C I+ I G S K
Sbjct: 213 YCDICTNRKGFCNLCMCTICNKFDFSVNTCRWIGCDLCSHWTHTDCAIRDGQITTGSSAK 272
Query: 434 -GPSGTSEMQFHCIGCGHASEMFGFVKDVFLHCAKDWGLDTFVKELDCVTKIFKGSNDFK 492
SG E+ F C C SE+ G+VKDVF HCA +W ++ +KELD V++IF+GS D +
Sbjct: 273 NNTSGPGEIVFKCRACNRTSELLGWVKDVFQHCAPNWDRESLMKELDFVSRIFRGSEDQR 332
Query: 493 GKELQKKAAELVSKLENKVMSPSEACNFIIRFFNNADSMSDFTASGTSLNDLIVTQASVQ 552
G++L K EL+ K++ ++ + A I+ FF +S S + L+ Q +
Sbjct: 333 GRKLFWKCEELIDKIKGG-LAEATAAKLILMFFQEIESDSAKSFENGEGGRLMAPQDACN 391
Query: 553 KDAIPIPPATSLPPKYTIYNMTSSSGRRDSMSNDLFKKDLIGDLKVEDEIRFGKLSKNDG 612
+ A + +L + ++ M+ + ++L K E++ + K
Sbjct: 392 RIAEVV--QETLRKMEIVAEEKMRMFKKARMALETCDRELEDKAKEVSELKAERQKKKLQ 449
Query: 613 FDSLESVVRIKEAEARMFQNKADEARREADEYKRMVCARTEKLEEEYAHKLSKLCLRETE 672
D LE +VR+K+AEA MFQ KA+EA+READ +R+V A+ +K EEEYA K L E E
Sbjct: 450 IDELERIVRLKQAEADMFQLKANEAKREADRLQRIVLAKMDKSEEEYASNYLKQRLSEAE 509
Query: 673 ERRRKKLEELKVLEDS 688
++ E++K+ E+S
Sbjct: 510 AEKQYLFEKIKLQENS 525
>sp|Q84N37|PVIP_PEA OBERON-like protein (Fragment) OS=Pisum sativum GN=PVIP PE=1 SV=1
Length = 513
Score = 293 bits (751), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 175/467 (37%), Positives = 247/467 (52%), Gaps = 38/467 (8%)
Query: 242 DGGRARKLSRPERI-LREIVSEAIPIMAQIIQELSDETLESVKEYLKNLFLM---SEKRE 297
D R++S +RI L++I E + ++ + L DE L+ +K L+ + S+ R+
Sbjct: 22 DQSVIRRVSSADRISLQDIARERVDVICDRMHRLPDEFLDELKNGLRAILEGGNGSQHRD 81
Query: 298 ELMALKKRLERRSDLSKETLSKCHKDQLAILVAVKMGLGSFLSAKIQLPVNKLVEIFLYM 357
E L+K ++ RSDL+ +TL + H+ QL ILV++ G+ FL I L L+EIFLY
Sbjct: 82 EFFILQKLVQSRSDLTAKTLIRAHRVQLEILVSINTGIQGFLHPSISLSQTSLIEIFLYK 141
Query: 358 RCRNVNCQSILPVDDCDCKICSTNKGFCSSCMCPVCLNFDCANNTCSWVGCDVCSHWCHA 417
RCRN+ CQ+ LP D+C C+ N GFC+ CMC +C FD NTC W+GCD+ SHW H
Sbjct: 142 RCRNIACQNQLPADECSXDTCTNNNGFCNLCMCVICSKFDFEVNTCRWIGCDLXSHWTHT 201
Query: 418 ACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGHASEMFGFVKDVFLHCAKDWGLDTFVKE 477
C I+ LI GPS+K SG SEM F C C S + G+VKDVF HCA W D ++E
Sbjct: 202 DCAIREQLICMGPSVKSGSGPSEMVFRCQACSXTSXLLGWVKDVFQHCAPSWDGDALIRE 261
Query: 478 LDCVTKIFKGSNDFKGKELQKKAAELVSKLENKVMSPSEACNFIIRFFNNADSMSDFTAS 537
LD V++IF GS D +G L K +L KL+++ M AC I+ F D + +
Sbjct: 262 LDFVSRIFHGSKDQRGMNLFWKCDDLKEKLKSRKMDSKAACRAILMVFQELDLDNSKSLE 321
Query: 538 GTSLNDLIVTQASVQKDAIPIPPATSLPPKYTIYNMTSSSGRRDSMSNDLFKKDLI---- 593
LI Q + + A + A I M + + M FKK I
Sbjct: 322 NAESGRLIAPQEACNRIAEVVQEA--------IRKMEFVADEKMRM----FKKARIAVEA 369
Query: 594 ------------GDLKVEDEIRFGKLSKNDGFDSLESVVRIKEAEARMFQNKADEARREA 641
GDLKVE + K + LE +VR+K AEA MFQ KA+EA+REA
Sbjct: 370 CDRELADKAREAGDLKVE------RQKKKSQIEELERIVRLKNAEADMFQLKANEAKREA 423
Query: 642 DEYKRMVCARTEKLEEEYAHKLSKLCLRETEERRRKKLEELKVLEDS 688
+ +R+ A+++K EEEY K L E E ++ E++K+ E S
Sbjct: 424 ERLQRIALAKSDKSEEEYTSNYLKQKLSEAEAEKQYLYEKIKLQESS 470
>sp|Q9S736|OBE1_ARATH Protein OBERON 1 OS=Arabidopsis thaliana GN=OBE1 PE=1 SV=1
Length = 566
Score = 288 bits (738), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 177/469 (37%), Positives = 260/469 (55%), Gaps = 27/469 (5%)
Query: 228 RKKDSENLRGLESMDGGRARKLSRPERI-LREIVSEAIPIMAQIIQELSDETLESVKEYL 286
RK DS G +S D R +S +++ LR+I E + I+A+ + L +E LE +K L
Sbjct: 64 RKTDSGKT-GPDSHDQHVIRHVSIADKVSLRDIARERLDIVAERMHRLPEEYLEELKNGL 122
Query: 287 KNLFLM--SEKREELMALKKRLERRSDLSKETLSKCHKDQLAILVAVKMGLGSFLSAKIQ 344
K + ++ +E M L+K ++ RSDL+ +TL + H+ QL +LV + G+ +FL I
Sbjct: 123 KAILEGNGAQPIDEFMFLQKFVQTRSDLTSKTLVRAHRVQLEVLVVINTGIQAFLHPNIN 182
Query: 345 LPVNKLVEIFLYMRCRNVNCQSILPVDDCDCKICSTNKGFCSSCMCPVCLNFDCANNTCS 404
L + L+EIF+Y RCRN+ CQ+ LP D C C+IC+ KGFC+ CMC +C FD A NTC
Sbjct: 183 LSQSSLIEIFVYKRCRNIACQNELPADGCPCEICANRKGFCNLCMCVICNKFDFAVNTCR 242
Query: 405 WVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGHASEMFGFVKDVFLH 464
W+GCDVCSHW H C I+ I G S K SG EM F C C H SE+ G+VKDVF H
Sbjct: 243 WIGCDVCSHWTHTDCAIRDGEISMGVSPKSVSGMGEMLFKCRACNHTSELLGWVKDVFQH 302
Query: 465 CAKDWGLDTFVKELDCVTKIFKGSNDFKGKELQKKAAELVSKLENKVMSPSEACNFIIRF 524
CA +W ++ +KELD V++IF+GS D +G++L K EL+ K++ ++ + A I+ F
Sbjct: 303 CAPNWDRESLMKELDFVSRIFRGSEDTRGRKLFWKCEELMEKIKGG-LAEATAAKLILMF 361
Query: 525 FNNADSMSDFTASGTSLNDLIVTQASVQKDAIPIPPATSLPPKYTIYNMTSSSGRRDSMS 584
F + S + I Q + + A + K T+ M + M
Sbjct: 362 FQEIELDSPKSLESGEGGGTIAPQDACNRIAEVV--------KETLRKMEIVGEEKTRM- 412
Query: 585 NDLFKKDLIG----------DLKVEDEIRFGKLSKNDGFDSLESVVRIKEAEARMFQNKA 634
+KK +G K E++ + K + +E +VR+K+AEA MFQ KA
Sbjct: 413 ---YKKARMGLEECEREVEEKAKQVAELQMERQKKKQQIEEVERIVRLKQAEAEMFQLKA 469
Query: 635 DEARREADEYKRMVCARTEKLEEEYAHKLSKLCLRETEERRRKKLEELK 683
+EA+ EA+ +R+V A+ EK EEEYA KL L E E + E++K
Sbjct: 470 NEAKVEAERLERIVKAKKEKTEEEYASNYLKLRLSEAEAEKEYLFEKIK 518
>sp|Q9FIE3|VIN3_ARATH Protein VERNALIZATION INSENSITIVE 3 OS=Arabidopsis thaliana GN=VIN3
PE=2 SV=2
Length = 620
Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 105/264 (39%), Gaps = 56/264 (21%)
Query: 276 DETLESVKEYLKNLFLMSEKREELMALKKRLERRSDLSKETLSKCHKDQLAILVAVKMGL 335
+E +E+ K N+ +SE+RE + AL + E S+L L+ ++++ ++ +MG
Sbjct: 29 NECIETCK---PNVLNVSERRELIHALSNQPEEASEL----LNSWSRNEIMKIICAEMGK 81
Query: 336 GSFLSAKIQLPVNKLVEIFLYMR----------------------------CRNVNCQSI 367
+ L KL+E L + C N+ C++
Sbjct: 82 ERKYTG---LNKPKLIENLLNLVSRPLGETSCSDRRNSRKKEKKMIGYIICCENLACRAA 138
Query: 368 LPVDDCDCKICSTNKGFCSSCMCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIK 427
L DD FC C C +C FD + W+ CD C CH CG++++
Sbjct: 139 LGCDD----------TFCRRCSCCICQKFDDNKDPSLWLTCDACGSSCHLECGLKQDRYG 188
Query: 428 PGPSLKGPSGTSEMQFHCIGCGHASEMFGFVKDVFLHCAKDWGLDTFVKELDCVTKIFKG 487
G S + +F+C CG +++ G + + +D L K+ +G
Sbjct: 189 IG------SDDLDGRFYCAYCGKDNDLLGCWRKQVKVAKETRRVDVLCYRLSLGQKLLRG 242
Query: 488 SNDFKGKELQKKAAELVSKLENKV 511
+ ++ L + E V KLE V
Sbjct: 243 TTKYRN--LLELMDEAVKKLEGDV 264
>sp|P45353|HIS2_PICPA Histidine biosynthesis trifunctional protein OS=Komagataella
pastoris GN=HIS4 PE=3 SV=1
Length = 842
Score = 38.5 bits (88), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 14/120 (11%)
Query: 211 PSELPARPRVETNSGDSRKKDSENLRGLESMDGGRARKLSRPERILREIVSEAIPIMAQI 270
P E+P+ R+E D K S+ + L RP + +I+ PI+ +
Sbjct: 398 PKEVPSEGRIELCKIDVSKASSQEIED----------ALRRPIQKTEQIMELVKPIVDNV 447
Query: 271 IQELSDETLESVKEY----LKNLFLMSEKREELMALKKRLERRSDLSKETLSKCHKDQLA 326
Q LE ++ LK L + EELM L ++R DLS + + K H+ QLA
Sbjct: 448 RQNGDKALLELTAKFDGVALKTPVLEAPFPEELMQLPDNVKRAIDLSIDNVRKFHEAQLA 507
>sp|Q6BXJ4|JHD1_DEBHA JmjC domain-containing histone demethylation protein 1
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=JHD1 PE=3 SV=2
Length = 514
Score = 37.4 bits (85), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 18/65 (27%)
Query: 390 CPVC----LNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPS--GTSEMQF 443
CP+C L N +W+ CD+C+ W HA+C LK P + +
Sbjct: 7 CPICVESPLEDSTTFNNIAWLQCDICNQWFHASC------------LKIPKIEVNNLHSY 54
Query: 444 HCIGC 448
HC GC
Sbjct: 55 HCEGC 59
>sp|P17119|KAR3_YEAST Kinesin-like protein KAR3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=KAR3 PE=1 SV=1
Length = 729
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 94/215 (43%), Gaps = 46/215 (21%)
Query: 542 NDLIVTQASVQKDAIPIPPATSL--PPKYTIYNMTSSSGRRDSMSNDLFKKDLIGDLKVE 599
ND++ +++ PP +L P + I+ + +S R SMS + ++L+ + K
Sbjct: 24 NDILAMNGHKRRNTTTPPPKHTLLKPQRTDIHRHSLASQSRISMSPN---RELLKNYKGT 80
Query: 600 DEIRFGKLSKNDGFDSL--ESVVRIKEAEARMFQNKA--DEARREADEYKRMVCA----- 650
+ +G N G S E+V + +A +F+ KA D + E E K + A
Sbjct: 81 ANLIYGNQKSNSGVTSFYKENVNELNRTQAILFEKKATLDLLKDELTETKEKINAVNLKF 140
Query: 651 ---RTEKLE----------------EEYAHKLSKLCLRETEERRRKKL-----EELKVLE 686
R EK++ EE+ K K + E E K+L +ELK +E
Sbjct: 141 ETLREEKIKIEQQLNLKNNELISIKEEFLSK--KQFMNEGHEIHLKQLAASNKKELKQME 198
Query: 687 DSH------CDYLKMKRMQAEIAGLLERMEATKQQ 715
+ + ++K+K+ + E A LL+++E + +
Sbjct: 199 NEYKTKIEKLKFMKIKQFENERASLLDKIEEVRNK 233
>sp|P0DC31|MECA_STRPQ Adapter protein MecA OS=Streptococcus pyogenes serotype M3 (strain
SSI-1) GN=mecA PE=3 SV=1
Length = 253
Score = 34.3 bits (77), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 530 SMSDFTASGTSLNDLIVTQASVQKDAIPIPPATSLPPKYTIYNMTS--SSGRRDSMSNDL 587
SM D G L D ++ Q ++ + LP + M S + R+D + +
Sbjct: 16 SMDDLEERGMELKDFLIPQEKTEEFFYSVMDELDLPDNFKDSGMLSFRVTPRKDRLDVFV 75
Query: 588 FKKDLIGDLKVEDEIRFGKLSK---NDGFDSLESVVRIK 623
K ++ D+ +ED FG +S+ D F SLE +R K
Sbjct: 76 TKSEINKDINLEDLAEFGDMSQMTPEDFFKSLEQSMREK 114
>sp|Q5XDV7|MECA_STRP6 Adapter protein MecA OS=Streptococcus pyogenes serotype M6 (strain
ATCC BAA-946 / MGAS10394) GN=mecA PE=3 SV=2
Length = 253
Score = 34.3 bits (77), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 530 SMSDFTASGTSLNDLIVTQASVQKDAIPIPPATSLPPKYTIYNMTS--SSGRRDSMSNDL 587
SM D G L D ++ Q ++ + LP + M S + R+D + +
Sbjct: 16 SMDDLEERGMELKDFLIPQEKTEEFFYSVMDELDLPDNFKDSGMLSFRVTPRKDRLDVFV 75
Query: 588 FKKDLIGDLKVEDEIRFGKLSK---NDGFDSLESVVRIK 623
K ++ D+ +ED FG +S+ D F SLE +R K
Sbjct: 76 TKSEINKDINLEDLAEFGDMSQMTPEDFFKSLEQSMREK 114
>sp|P0DC30|MECA_STRP3 Adapter protein MecA OS=Streptococcus pyogenes serotype M3 (strain
ATCC BAA-595 / MGAS315) GN=mecA PE=3 SV=1
Length = 253
Score = 34.3 bits (77), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 530 SMSDFTASGTSLNDLIVTQASVQKDAIPIPPATSLPPKYTIYNMTS--SSGRRDSMSNDL 587
SM D G L D ++ Q ++ + LP + M S + R+D + +
Sbjct: 16 SMDDLEERGMELKDFLIPQEKTEEFFYSVMDELDLPDNFKDSGMLSFRVTPRKDRLDVFV 75
Query: 588 FKKDLIGDLKVEDEIRFGKLSK---NDGFDSLESVVRIK 623
K ++ D+ +ED FG +S+ D F SLE +R K
Sbjct: 76 TKSEINKDINLEDLAEFGDMSQMTPEDFFKSLEQSMREK 114
>sp|B5XJR8|MECA_STRPZ Adapter protein MecA OS=Streptococcus pyogenes serotype M49 (strain
NZ131) GN=mecA PE=3 SV=1
Length = 253
Score = 34.3 bits (77), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 530 SMSDFTASGTSLNDLIVTQASVQKDAIPIPPATSLPPKYTIYNMTS--SSGRRDSMSNDL 587
SM D G L D ++ Q ++ + LP + M S + R+D + +
Sbjct: 16 SMDDLEERGMELKDFLIPQEKTEEFFYSVMDELDLPDNFKDSGMLSFRVTPRKDRLDVFV 75
Query: 588 FKKDLIGDLKVEDEIRFGKLSK---NDGFDSLESVVRIK 623
K ++ D+ +ED FG +S+ D F SLE +R K
Sbjct: 76 TKSEINKDINLEDLAEFGDMSQMTPEDFFKSLEQSMREK 114
>sp|A2RCI9|MECA_STRPG Adapter protein MecA OS=Streptococcus pyogenes serotype M5 (strain
Manfredo) GN=mecA PE=3 SV=1
Length = 253
Score = 34.3 bits (77), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 530 SMSDFTASGTSLNDLIVTQASVQKDAIPIPPATSLPPKYTIYNMTS--SSGRRDSMSNDL 587
SM D G L D ++ Q ++ + LP + M S + R+D + +
Sbjct: 16 SMDDLEERGMELKDFLIPQEKTEEFFYSVMDELDLPDNFKDSGMLSFRVTPRKDRLDVFV 75
Query: 588 FKKDLIGDLKVEDEIRFGKLSK---NDGFDSLESVVRIK 623
K ++ D+ +ED FG +S+ D F SLE +R K
Sbjct: 76 TKSEINKDINLEDLAEFGDMSQMTPEDFFKSLEQSMREK 114
>sp|P60188|MECA_STRP8 Adapter protein MecA OS=Streptococcus pyogenes serotype M18 (strain
MGAS8232) GN=mecA PE=3 SV=1
Length = 253
Score = 34.3 bits (77), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 530 SMSDFTASGTSLNDLIVTQASVQKDAIPIPPATSLPPKYTIYNMTS--SSGRRDSMSNDL 587
SM D G L D ++ Q ++ + LP + M S + R+D + +
Sbjct: 16 SMDDLEERGMELKDFLIPQEKTEEFFYSVMDELDLPDNFKDSGMLSFRVTPRKDRLDVFV 75
Query: 588 FKKDLIGDLKVEDEIRFGKLSK---NDGFDSLESVVRIK 623
K ++ D+ +ED FG +S+ D F SLE +R K
Sbjct: 76 TKSEINKDINLEDLAEFGDMSQMTPEDFFKSLEQSMREK 114
>sp|P60187|MECA_STRP1 Adapter protein MecA OS=Streptococcus pyogenes serotype M1 GN=mecA
PE=3 SV=1
Length = 253
Score = 34.3 bits (77), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 530 SMSDFTASGTSLNDLIVTQASVQKDAIPIPPATSLPPKYTIYNMTS--SSGRRDSMSNDL 587
SM D G L D ++ Q ++ + LP + M S + R+D + +
Sbjct: 16 SMDDLEERGMELKDFLIPQEKTEEFFYSVMDELDLPDNFKDSGMLSFRVTPRKDRLDVFV 75
Query: 588 FKKDLIGDLKVEDEIRFGKLSK---NDGFDSLESVVRIK 623
K ++ D+ +ED FG +S+ D F SLE +R K
Sbjct: 76 TKSEINKDINLEDLAEFGDMSQMTPEDFFKSLEQSMREK 114
>sp|Q9FH37|ILR3_ARATH Transcription factor ILR3 OS=Arabidopsis thaliana GN=ILR3 PE=1 SV=1
Length = 234
Score = 34.3 bits (77), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 259 IVSEAIPIMAQI---IQELSDETLESVKEYLKNLFLMSEKREELMALKKRLERRSDLSKE 315
I+ +A+ ++ Q+ Q+L D S+++ +K L ++ EL K+RL+ + ++
Sbjct: 111 ILVDAVRMVTQLRGEAQKLKDSN-SSLQDKIKEL---KTEKNELRDEKQRLKTEKEKLEQ 166
Query: 316 TLSKCHKDQLAILVAVKMGLGSFLSAKIQLPVNKLVEIFLY 356
L + Q + A M +F SA+ Q P NK+V I Y
Sbjct: 167 QLKAMNAPQPSFFPAPPMMPTAFASAQGQAPGNKMVPIISY 207
>sp|Q58046|Y629_METJA UPF0111 protein MJ0629 OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=MJ0629 PE=3 SV=1
Length = 214
Score = 33.9 bits (76), Expect = 4.4, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 23/137 (16%)
Query: 226 DSRKKDSENLR-----GLESMDGGRARKLSRPERILREIVSEAIPIMAQIIQELSDETLE 280
D+ K +NLR L+S++ + S+ E+IL+EI+ I+E DET +
Sbjct: 14 DNEKSVIDNLRLLIQMSLKSIELLKDYMNSKDEKILKEIIK---------IEEEGDETTK 64
Query: 281 SVKEYLKNLFLMSEKREELMALKKRLERRSDLSKETLSKCHKDQLAILVAVKMGLGSFLS 340
+++ L+ FL + +RE L R ++L ETL K + +K +L
Sbjct: 65 NIRINLEKAFLPNMRRE--------LSRSAELLDETLDSL-KHAAMLYELLKEEFDEYLK 115
Query: 341 AKIQLPVNKLVEIFLYM 357
+I L + V++F ++
Sbjct: 116 NEIDLVLMITVDMFQHL 132
>sp|Q56705|FLIDP_VIBPA Polar flagellar hook-associated protein 2 OS=Vibrio
parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
GN=fliDP PE=3 SV=2
Length = 670
Score = 33.5 bits (75), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 617 ESVVRIKEAEARMFQNKADEARREADEYKRMVCARTEK--LEEEYAHKLSKLCLRETEER 674
+S V KEA+ + Q KA+ ++ ADE K+ + A+ E+ L EE A ++ + L E
Sbjct: 346 DSYVTTKEAKQLLEQEKAEIEQKIADE-KQELDAKVERGELSEEQAKQIHRAKLDPQERE 404
Query: 675 RRKKLEELKV----LEDSHCDYLKMKRMQA 700
R +K++E + + S +YL M +QA
Sbjct: 405 RLEKIDEAEAKIAKAQSSFEEYLGMTEVQA 434
>sp|Q6KIP2|POTA_MYCMO Spermidine/putrescine import ATP-binding protein PotA OS=Mycoplasma
mobile (strain ATCC 43663 / 163K / NCTC 11711) GN=potA
PE=3 SV=1
Length = 473
Score = 33.1 bits (74), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 17/102 (16%)
Query: 592 LIGDLKVEDEIRFG-KLSKNDGFDSLESVVRIKEAEARMFQNKADEARREADEYKRMVCA 650
L L VE I++G KL + + +KE + + F+NK + ++ ADE +M+
Sbjct: 115 LFPHLSVEGNIKYGLKLKR-------VPLTDVKELQLKTFENKVNIWKKTADE--KML-- 163
Query: 651 RTEKLEEEYAHKLSKLCLRETEERRRKKLEELKVLEDSHCDY 692
+ +K++E+Y KL E E++R K + K ++DS Y
Sbjct: 164 QLDKIQEDYRQKLQS---SELTEKQRSKFQ--KWIDDSDFHY 200
>sp|O00291|HIP1_HUMAN Huntingtin-interacting protein 1 OS=Homo sapiens GN=HIP1 PE=1 SV=5
Length = 1037
Score = 32.7 bits (73), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 621 RIKEAEARMFQNKADEARREADEYKRMVCARTEKLEEEYAHK-LSKLCLRETEERRRKKL 679
++KE + + QN AD R+ A+ K++ AR +++ E K L R +++ +RK
Sbjct: 470 KLKEKYSELVQNHADLLRKNAEVTKQVSMARQAQVDLEREKKELEDSLERISDQGQRKTQ 529
Query: 680 EELKVLEDSHCDYLKMKRMQAEIAGLLERMEATKQQWV 717
E+L+VLE + +R + G LE ++ W
Sbjct: 530 EQLEVLESLKQELATSQRELQVLQGSLETSAQSEANWA 567
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 262,453,648
Number of Sequences: 539616
Number of extensions: 11591834
Number of successful extensions: 58195
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 261
Number of HSP's that attempted gapping in prelim test: 57069
Number of HSP's gapped (non-prelim): 1175
length of query: 717
length of database: 191,569,459
effective HSP length: 125
effective length of query: 592
effective length of database: 124,117,459
effective search space: 73477535728
effective search space used: 73477535728
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)