Query 005036
Match_columns 717
No_of_seqs 101 out of 124
Neff 3.4
Searched_HMMs 29240
Date Mon Mar 25 13:26:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005036.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005036hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lqh_A Histone-lysine N-methyl 96.4 0.0033 1.1E-07 61.3 5.8 68 389-463 4-73 (183)
2 2k16_A Transcription initiatio 94.9 0.01 3.4E-07 49.3 2.1 48 389-450 20-67 (75)
3 2kgg_A Histone demethylase jar 94.5 0.011 3.7E-07 46.5 1.2 49 387-448 2-51 (52)
4 1we9_A PHD finger family prote 93.2 0.015 5.1E-07 46.9 -0.2 49 391-451 10-58 (64)
5 1wew_A DNA-binding family prot 92.3 0.048 1.6E-06 46.0 1.7 50 392-450 20-71 (78)
6 3shb_A E3 ubiquitin-protein li 91.8 0.081 2.8E-06 45.1 2.5 64 372-449 10-75 (77)
7 1wep_A PHF8; structural genomi 90.1 0.086 2.9E-06 44.4 1.1 48 392-451 16-63 (79)
8 2xb1_A Pygopus homolog 2, B-ce 89.9 0.12 4E-06 46.1 1.9 56 387-453 3-63 (105)
9 1wee_A PHD finger family prote 89.8 0.061 2.1E-06 44.5 0.0 46 392-450 20-65 (72)
10 3asl_A E3 ubiquitin-protein li 89.0 0.24 8.2E-06 41.3 3.0 64 374-451 4-69 (70)
11 1wem_A Death associated transc 88.1 0.17 5.8E-06 42.1 1.5 50 392-450 20-69 (76)
12 2vpb_A Hpygo1, pygopus homolog 86.8 0.28 9.5E-06 40.5 2.1 31 387-420 8-40 (65)
13 2lv9_A Histone-lysine N-methyl 86.6 0.24 8.2E-06 43.5 1.7 45 392-451 32-76 (98)
14 2e6s_A E3 ubiquitin-protein li 85.6 0.4 1.4E-05 40.8 2.5 62 374-449 12-75 (77)
15 3kqi_A GRC5, PHD finger protei 84.8 0.19 6.5E-06 41.9 0.2 49 390-450 12-60 (75)
16 3kv5_D JMJC domain-containing 84.5 0.19 6.6E-06 55.3 0.0 48 390-449 39-86 (488)
17 3o70_A PHD finger protein 13; 83.8 0.28 9.6E-06 40.7 0.7 44 392-450 23-66 (68)
18 2ri7_A Nucleosome-remodeling f 83.5 0.36 1.2E-05 45.2 1.4 45 611-655 128-172 (174)
19 1wen_A Inhibitor of growth fam 82.9 0.45 1.5E-05 39.8 1.7 43 392-451 20-65 (71)
20 3o7a_A PHD finger protein 13 v 82.7 0.34 1.1E-05 37.9 0.8 44 391-449 7-50 (52)
21 3v43_A Histone acetyltransfera 81.4 0.95 3.3E-05 40.2 3.3 56 382-450 55-111 (112)
22 2rsd_A E3 SUMO-protein ligase 81.4 0.32 1.1E-05 40.0 0.2 47 392-449 14-63 (68)
23 3pur_A Lysine-specific demethy 81.4 0.48 1.6E-05 53.0 1.6 51 388-450 43-93 (528)
24 1x4i_A Inhibitor of growth pro 80.2 0.44 1.5E-05 39.8 0.6 42 392-450 10-54 (70)
25 2jmi_A Protein YNG1, ING1 homo 80.1 0.38 1.3E-05 42.3 0.2 41 392-449 30-74 (90)
26 1f62_A Transcription factor WS 79.4 0.91 3.1E-05 34.9 2.1 48 390-451 3-50 (51)
27 3c6w_A P28ING5, inhibitor of g 79.3 0.39 1.3E-05 38.8 0.1 43 391-450 12-57 (59)
28 1weu_A Inhibitor of growth fam 79.3 0.55 1.9E-05 41.4 1.0 43 392-451 40-85 (91)
29 1wil_A KIAA1045 protein; ring 77.7 1.3 4.5E-05 39.2 2.9 61 389-455 17-80 (89)
30 3ask_A E3 ubiquitin-protein li 77.1 0.8 2.7E-05 46.3 1.6 65 373-451 159-225 (226)
31 2vnf_A ING 4, P29ING4, inhibit 76.9 0.51 1.8E-05 38.1 0.1 43 391-450 13-58 (60)
32 2g6q_A Inhibitor of growth pro 75.5 0.59 2E-05 38.2 0.1 42 392-450 15-59 (62)
33 3kv4_A PHD finger protein 8; e 75.3 0.43 1.5E-05 52.2 -1.0 49 390-450 7-55 (447)
34 1f5n_A Interferon-induced guan 73.0 20 0.00069 40.4 11.5 85 631-716 493-590 (592)
35 3oja_B Anopheles plasmodium-re 65.6 56 0.0019 35.1 12.7 35 612-646 457-491 (597)
36 2ku7_A MLL1 PHD3-CYP33 RRM chi 64.7 1.7 5.7E-05 37.8 0.5 17 404-420 1-17 (140)
37 2ysm_A Myeloid/lymphoid or mix 63.9 2.9 0.0001 36.7 2.0 54 382-449 48-102 (111)
38 2lri_C Autoimmune regulator; Z 61.2 3.2 0.00011 34.3 1.6 35 405-450 24-58 (66)
39 2fnf_X Putative RAS effector N 61.1 3.3 0.00011 34.6 1.7 34 380-422 33-66 (72)
40 2kwj_A Zinc finger protein DPF 60.5 2.5 8.7E-05 37.7 1.0 52 383-448 53-105 (114)
41 2ku3_A Bromodomain-containing 58.3 4 0.00014 34.1 1.7 48 388-449 17-64 (71)
42 2l43_A N-teminal domain from h 58.3 3.2 0.00011 35.8 1.2 49 388-450 26-74 (88)
43 3g9g_A Suppressor of yeast pro 55.0 51 0.0017 34.1 9.6 85 627-711 63-182 (287)
44 3o36_A Transcription intermedi 51.3 5.8 0.0002 37.6 1.8 44 611-654 138-181 (184)
45 3pfq_A PKC-B, PKC-beta, protei 49.4 4.9 0.00017 44.8 1.2 27 404-430 64-90 (674)
46 3u5n_A E3 ubiquitin-protein li 49.4 5.1 0.00017 38.8 1.1 38 611-648 139-176 (207)
47 1rfh_A RAS association (ralgds 48.2 5.1 0.00018 32.0 0.8 34 380-422 20-53 (59)
48 2v0o_A FCHO2, FCH domain only 43.6 88 0.003 30.2 8.9 18 698-715 127-144 (276)
49 2dfs_A Myosin-5A; myosin-V, in 42.3 68 0.0023 38.6 9.3 28 607-634 924-951 (1080)
50 4bbq_A Lysine-specific demethy 41.7 7.8 0.00027 34.0 1.0 43 401-450 71-113 (117)
51 3vkg_A Dynein heavy chain, cyt 40.5 67 0.0023 43.1 9.5 109 410-523 1631-1772(3245)
52 3vkg_A Dynein heavy chain, cyt 40.5 1.3E+02 0.0044 40.6 12.0 20 488-507 1680-1699(3245)
53 2puy_A PHD finger protein 21A; 39.5 8.5 0.00029 30.6 0.8 44 389-449 7-50 (60)
54 3nw0_A Non-structural maintena 39.1 28 0.00096 34.8 4.6 143 260-451 82-226 (238)
55 2l5u_A Chromodomain-helicase-D 38.2 12 0.00042 30.0 1.5 45 389-450 13-57 (61)
56 2e6r_A Jumonji/ARID domain-con 36.9 7.2 0.00025 33.9 -0.0 47 389-449 18-64 (92)
57 1ptq_A Protein kinase C delta 35.9 15 0.00051 27.6 1.6 36 381-422 10-45 (50)
58 2yql_A PHD finger protein 21A; 35.5 7.5 0.00026 30.5 -0.1 44 389-449 11-54 (56)
59 2dkt_A Ring finger and CHY zin 35.3 17 0.00057 34.6 2.2 63 362-451 62-124 (143)
60 2yt5_A Metal-response element- 35.1 12 0.00041 29.9 1.0 54 388-450 7-60 (66)
61 2efk_A CDC42-interacting prote 34.9 2.5E+02 0.0087 27.3 10.7 54 662-715 80-138 (301)
62 3uej_A NPKC-delta, protein kin 34.6 16 0.00056 29.2 1.8 20 404-423 36-55 (65)
63 3v6i_A V-type ATP synthase sub 34.4 2.4E+02 0.0082 26.5 10.0 16 636-651 32-47 (187)
64 2ecm_A Ring finger and CHY zin 33.6 10 0.00035 28.1 0.4 34 389-425 7-41 (55)
65 1t2k_D Cyclic-AMP-dependent tr 32.9 21 0.00071 28.7 2.1 46 605-650 16-61 (61)
66 2enn_A NPKC-theta, protein kin 32.7 17 0.00058 30.3 1.6 38 381-424 33-70 (77)
67 2enz_A NPKC-theta, protein kin 30.5 15 0.00053 29.4 1.0 36 381-422 22-57 (65)
68 1y8f_A UNC-13 homolog A, MUNC1 29.9 16 0.00056 29.4 1.0 36 381-422 23-58 (66)
69 2yuu_A NPKC-delta, protein kin 29.4 23 0.00079 29.8 1.9 44 381-430 27-70 (83)
70 1xwh_A Autoimmune regulator; P 28.7 14 0.00047 30.0 0.4 36 404-450 19-54 (66)
71 1wev_A Riken cDNA 1110020M19; 28.1 19 0.00065 30.9 1.2 54 388-450 17-71 (88)
72 3h0g_I DNA-directed RNA polyme 27.8 28 0.00096 31.1 2.3 40 383-423 5-46 (113)
73 2au3_A DNA primase; zinc ribbo 27.8 37 0.0013 36.0 3.5 22 441-462 54-75 (407)
74 2efl_A Formin-binding protein 27.5 4.1E+02 0.014 25.7 10.7 23 628-650 35-57 (305)
75 2k6i_A Uncharacterized protein 27.2 30 0.001 28.4 2.1 38 617-655 16-53 (56)
76 1v5n_A PDI-like hypothetical p 27.1 36 0.0012 29.3 2.8 38 389-430 49-86 (89)
77 2eli_A Protein kinase C alpha 27.0 25 0.00086 29.8 1.7 39 381-425 27-65 (85)
78 1jnm_A Proto-oncogene C-JUN; B 26.6 23 0.00077 28.6 1.3 46 605-650 16-61 (62)
79 2ea6_A Ring finger protein 4; 25.9 14 0.00049 28.3 -0.0 36 389-424 17-53 (69)
80 3oja_A Leucine-rich immune mol 25.2 1.4E+02 0.005 31.4 7.5 9 52-60 34-42 (487)
81 2db6_A SH3 and cysteine rich d 25.0 25 0.00085 29.1 1.3 44 381-430 27-71 (74)
82 2ro1_A Transcription intermedi 24.2 20 0.00069 34.5 0.7 48 389-453 4-51 (189)
83 2kiz_A E3 ubiquitin-protein li 23.9 23 0.0008 27.5 0.9 32 389-424 16-48 (69)
84 2ep4_A Ring finger protein 24; 23.6 28 0.00095 27.4 1.3 33 389-424 17-49 (74)
85 2ct0_A Non-SMC element 1 homol 22.3 30 0.001 29.1 1.3 31 390-425 18-48 (74)
86 3cxl_A N-chimerin; SH2, RHO-GA 22.1 31 0.001 37.1 1.6 18 404-421 236-253 (463)
87 2jwo_A RAG-2, V(D)J recombinat 21.0 15 0.00052 32.1 -0.8 8 412-419 46-53 (82)
88 1x4j_A Ring finger protein 38; 20.2 20 0.00069 28.5 -0.2 33 389-424 25-57 (75)
89 3v43_A Histone acetyltransfera 20.1 42 0.0014 29.6 1.8 32 389-420 7-41 (112)
No 1
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=96.43 E-value=0.0033 Score=61.26 Aligned_cols=68 Identities=18% Similarity=0.548 Sum_probs=43.1
Q ss_pred ccccccc-ccCCCCccceEecCCcchHHhHHhhhhcC-cccCCCCCCCCCCCccceEEeccCCCccchhhhHHHHHh
Q 005036 389 MCPVCLN-FDCANNTCSWVGCDVCSHWCHAACGIQRN-LIKPGPSLKGPSGTSEMQFHCIGCGHASEMFGFVKDVFL 463 (717)
Q Consensus 389 sC~IC~K-FD~nkdtc~WIgCd~CgHwcHldCALr~~-~i~~G~~~kG~s~~lDm~F~C~aCgk~SeLlG~VKkvf~ 463 (717)
.|+||.+ |+++-...-||.||.|-.|-|..|.--.. .+ ...+ ...-+..|+|..|-....-. |++.++
T Consensus 4 ~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~---e~~~--~~pe~~~y~Cp~C~~~~~~~--~~~~~~ 73 (183)
T 3lqh_A 4 FCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMY---EILS--NLPESVAYTCVNCTERHPAE--WRLALE 73 (183)
T ss_dssp BCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHH---HHHH--HSHHHHCCCCTTTCCSSSCH--HHHHHH
T ss_pred cCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHH---HHhh--cCCCCCeeECcCCCCCCCHH--HHHHHH
Confidence 4889988 56555578899999999999999972111 00 0000 00112489999998886643 554433
No 2
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=94.89 E-value=0.01 Score=49.25 Aligned_cols=48 Identities=35% Similarity=0.860 Sum_probs=34.4
Q ss_pred cccccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCCC
Q 005036 389 MCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGH 450 (717)
Q Consensus 389 sC~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCgk 450 (717)
.|.||.+.+ ++-.||.||.|..|-|+.|. |.... ...++.|+|..|-.
T Consensus 20 ~C~~C~~~~---~~~~mi~CD~C~~wfH~~Cv--------~~~~~---~~~~~~w~C~~C~~ 67 (75)
T 2k16_A 20 ICPGCNKPD---DGSPMIGCDDCDDWYHWPCV--------GIMAA---PPEEMQWFCPKCAN 67 (75)
T ss_dssp CBTTTTBCC---SSCCEEECSSSSSEEEHHHH--------TCSSC---CCSSSCCCCTTTHH
T ss_pred CCCCCCCCC---CCCCEEEcCCCCcccccccC--------CCCcc---CCCCCCEEChhccC
Confidence 366888876 35689999999999999996 22211 11246899999943
No 3
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=94.46 E-value=0.011 Score=46.48 Aligned_cols=49 Identities=27% Similarity=0.667 Sum_probs=35.3
Q ss_pred CCcccccccccCCCCccceEecC-CcchHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccC
Q 005036 387 SCMCPVCLNFDCANNTCSWVGCD-VCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGC 448 (717)
Q Consensus 387 ~CsC~IC~KFD~nkdtc~WIgCd-~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aC 448 (717)
.|.|++|.+-++ +.-.||.|| .|..|-|+.|.=-... ...+..|+|..|
T Consensus 2 ~c~cc~C~~p~~--~~~~mI~Cd~~C~~WfH~~Cvgl~~~-----------~~~~~~~~C~~C 51 (52)
T 2kgg_A 2 VCAAQNCQRPCK--DKVDWVQCDGGCDEWFHQVCVGVSPE-----------MAENEDYICINC 51 (52)
T ss_dssp CCSCTTCCCCCC--TTCCEEECTTTTCCEEETTTTTCCHH-----------HHHHSCCCCSCC
T ss_pred cccCCCCcCccC--CCCcEEEeCCCCCccCcccccCCCcc-----------ccCCCCEECCCC
Confidence 489999988542 356899999 9999999999622211 111367999887
No 4
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=93.21 E-value=0.015 Score=46.85 Aligned_cols=49 Identities=22% Similarity=0.590 Sum_probs=32.4
Q ss_pred cccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCCCc
Q 005036 391 PVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGHA 451 (717)
Q Consensus 391 ~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCgk~ 451 (717)
.||.+-++ +.-.||.||.|..|-|+.|.=-... ....-..|+|..|-.+
T Consensus 10 ~~C~~~~~--~~~~mI~Cd~C~~WfH~~Cvgl~~~----------~~~~~~~~~C~~C~~k 58 (64)
T 1we9_A 10 GACGESYA--ADEFWICCDLCEMWFHGKCVKITPA----------RAEHIKQYKCPSCSNK 58 (64)
T ss_dssp SSSCCCCC--SSSCEEECSSSCCEEETTTTTCCTT----------GGGGCSSCCCHHHHTT
T ss_pred CCCCCccC--CCCCEEEccCCCCCCCccccCcChh----------HhcCCCcEECCCCcCc
Confidence 47877532 2357999999999999999722211 0111248999999543
No 5
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=92.29 E-value=0.048 Score=45.98 Aligned_cols=50 Identities=26% Similarity=0.415 Sum_probs=33.9
Q ss_pred ccccccCCCCccceEecC--CcchHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCCC
Q 005036 392 VCLNFDCANNTCSWVGCD--VCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGH 450 (717)
Q Consensus 392 IC~KFD~nkdtc~WIgCd--~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCgk 450 (717)
||.+.|++ -.||.|| .|..|-|+.|.--.... .+........|+|..|-.
T Consensus 20 iC~~~~~~---g~MI~CD~~~C~~W~H~~CVgi~~~~------~~~~~~~~~~~~C~~C~~ 71 (78)
T 1wew_A 20 VCGNSLET---DSMIQCEDPRCHVWQHVGCVILPDKP------MDGNPPLPESFYCEICRL 71 (78)
T ss_dssp SSCCCCCC---SCEEECSSTTTCCEEEHHHHSCCCTT------TCSCSCSCSSCCCHHHHH
T ss_pred ECCCcCCC---CCEEEECCccCCccccCEEEcccccc------ccccccCCCCEECCCCCc
Confidence 78887432 2899999 99999999997332211 111224556899998853
No 6
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=91.77 E-value=0.081 Score=45.14 Aligned_cols=64 Identities=25% Similarity=0.591 Sum_probs=48.2
Q ss_pred CCCcccccC-CCCCCCCCcccccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccce-EEeccCC
Q 005036 372 DCDCKICST-NKGFCSSCMCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQ-FHCIGCG 449 (717)
Q Consensus 372 Dc~C~IC~~-~~GFCr~CsC~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm~-F~C~aCg 449 (717)
.-.|+.|-- ..-+|..|.|-||.+-+ ++-.-|.||.|..+-|+.|-- +.+. ...++. .+|..|-
T Consensus 10 ~~~c~~c~~~~~W~C~~C~C~vC~~~~---d~~~ll~CD~C~~~yH~~Cl~--------PpL~---~~P~g~~W~C~~C~ 75 (77)
T 3shb_A 10 GPSCKHCKDDVNRLCRVCACHLCGGRQ---DPDKQLMCDECDMAFHIYCLD--------PPLS---SVPSEDEWYCPECR 75 (77)
T ss_dssp CCSCTTTTTCTTSCCTTTSBTTTCCCS---CGGGEEECTTTCCEEETTTSS--------SCCS---SCCSSSCCCCTTTC
T ss_pred CccccccCCCCCCCCCCCcCCccCCCC---CCcceeEeCCCCCccCcccCC--------Cccc---CCCCCCceECcCcc
Confidence 346888877 67899999999999876 567899999999999999953 2111 112335 8898884
No 7
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=90.08 E-value=0.086 Score=44.36 Aligned_cols=48 Identities=19% Similarity=0.462 Sum_probs=33.1
Q ss_pred ccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCCCc
Q 005036 392 VCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGHA 451 (717)
Q Consensus 392 IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCgk~ 451 (717)
||.+-++ +.-.||.||.|..|-|..|.=-.... ......|+|..|-..
T Consensus 16 ~C~~~~d--~~~~MIqCd~C~~WfH~~Cvgl~~~~----------~~~~~~~~C~~C~~~ 63 (79)
T 1wep_A 16 LCRQPYN--VNHFMIECGLCQDWFHGSCVGIEEEN----------AVDIDIYHCPDCEAV 63 (79)
T ss_dssp TTSCSCC--SSSCEEEBTTTCCEEEHHHHTCCHHH----------HTTCSBBCCTTTTTT
T ss_pred EcCCccC--CCCceEEcCCCCCcEEeeecCccccc----------ccCCCeEECCCcccc
Confidence 7877542 24589999999999999997322110 011248999999865
No 8
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=89.91 E-value=0.12 Score=46.12 Aligned_cols=56 Identities=20% Similarity=0.446 Sum_probs=37.5
Q ss_pred CCcccccccc-cCCCCccceEecC-CcchHHhHHhhhhcCcccCCCCCCC-CC--CCccceEEeccCCCccc
Q 005036 387 SCMCPVCLNF-DCANNTCSWVGCD-VCSHWCHAACGIQRNLIKPGPSLKG-PS--GTSEMQFHCIGCGHASE 453 (717)
Q Consensus 387 ~CsC~IC~KF-D~nkdtc~WIgCd-~CgHwcHldCALr~~~i~~G~~~kG-~s--~~lDm~F~C~aCgk~Se 453 (717)
.+-|.||.+- +++ -.||.|| .|-.|-|.+|. |..... .. ...+..|+|..|-...+
T Consensus 3 ~~~C~iC~~p~~~~---~~mi~Cdd~C~~WfH~~CV--------glt~~~~~~i~~~~~~~~~Cp~C~~~~~ 63 (105)
T 2xb1_A 3 VYPCGACRSEVNDD---QDAILCEASCQKWFHRECT--------GMTESAYGLLTTEASAVWACDLCLKTKE 63 (105)
T ss_dssp CCBCTTTCSBCCTT---SCEEECTTTTCCEEEGGGT--------TCCHHHHHHHHHCTTEEECCHHHHHTTT
T ss_pred cCCCCCCCCccCCC---CCEEEecCCcccccccccC--------CcCHHHHHhhccCCCCCEECccccCcCC
Confidence 4679999995 433 2499998 99999999995 221000 00 02347999999976644
No 9
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=89.81 E-value=0.061 Score=44.52 Aligned_cols=46 Identities=26% Similarity=0.513 Sum_probs=31.4
Q ss_pred ccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCCC
Q 005036 392 VCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGH 450 (717)
Q Consensus 392 IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCgk 450 (717)
||.+-++ ++-.||.||.|..|-|+.|.=-... ......|+|..|-.
T Consensus 20 ~C~~~~~--~g~~mI~Cd~C~~W~H~~Cvg~~~~-----------~~~~~~~~C~~C~~ 65 (72)
T 1wee_A 20 KCGTKDD--DGERMLACDGCGVWHHTRCIGINNA-----------DALPSKFLCFRCIE 65 (72)
T ss_dssp TTCCCSC--CSSCEEECSSSCEEEETTTTTCCTT-----------SCCCSCCCCHHHHH
T ss_pred eCCCccC--CCCcEEECCCCCCccCCeeeccCcc-----------ccCCCcEECCCccC
Confidence 5766432 3457999999999999999732221 11345899998853
No 10
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=89.02 E-value=0.24 Score=41.25 Aligned_cols=64 Identities=25% Similarity=0.636 Sum_probs=47.4
Q ss_pred CcccccC-CCCCCCCCcccccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccc-eEEeccCCCc
Q 005036 374 DCKICST-NKGFCSSCMCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEM-QFHCIGCGHA 451 (717)
Q Consensus 374 ~C~IC~~-~~GFCr~CsC~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm-~F~C~aCgk~ 451 (717)
.|+.|-. .+-+|..|.|-||.+-+ ++-.-|.||.|..+-|+.|- ++.+. ...++ ..+|..|-..
T Consensus 4 ~c~~c~~~~~w~C~~C~C~~C~~~~---~~~~ll~CD~C~~~yH~~Cl--------~Ppl~---~~P~g~~W~C~~C~~~ 69 (70)
T 3asl_A 4 SCKHCKDDVNRLCRVCACHLCGGRQ---DPDKQLMCDECDMAFHIYCL--------DPPLS---SVPSEDEWYCPECRND 69 (70)
T ss_dssp SCTTTTTCTTSCCTTTSBTTTCCCS---CGGGEEECTTTCCEEEGGGS--------SSCCS---SCCSSSCCCCTTTSCC
T ss_pred ccccccCCCCeECCCCCCcCCCCcC---CCCCEEEcCCCCCceecccC--------CCCcC---CCCCCCCcCCcCccCc
Confidence 4677765 56789999999999875 45688999999999999995 22111 11244 8999999654
No 11
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=88.06 E-value=0.17 Score=42.10 Aligned_cols=50 Identities=20% Similarity=0.454 Sum_probs=31.7
Q ss_pred ccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCCC
Q 005036 392 VCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGH 450 (717)
Q Consensus 392 IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCgk 450 (717)
||.+.++ .-.||.||.|..|-|..|.=-.... .. .....+..|+|..|-.
T Consensus 20 ~C~~~~~---~~~MI~Cd~C~~WfH~~Cvgl~~~~--~~----~l~~~~~~~~C~~C~~ 69 (76)
T 1wem_A 20 ICRQPHN---NRFMICCDRCEEWFHGDCVGISEAR--GR----LLERNGEDYICPNCTI 69 (76)
T ss_dssp TTCCCCC---SSCEEECSSSCCEEEHHHHSCCHHH--HH----HHHHHTCCCCCHHHHH
T ss_pred ECCCccC---CCCEEEeCCCCCcEeCeEEccchhh--hh----hccCCCCeEECcCCcC
Confidence 7888654 3479999999999999997221100 00 0000245899988853
No 12
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=86.84 E-value=0.28 Score=40.51 Aligned_cols=31 Identities=26% Similarity=0.702 Sum_probs=25.4
Q ss_pred CCcccccccc-cCCCCccceEecC-CcchHHhHHhh
Q 005036 387 SCMCPVCLNF-DCANNTCSWVGCD-VCSHWCHAACG 420 (717)
Q Consensus 387 ~CsC~IC~KF-D~nkdtc~WIgCd-~CgHwcHldCA 420 (717)
.+-|.+|.+- ++ .-.||.|| .|.-|-|..|.
T Consensus 8 ~~~C~~C~~p~~~---~~~mI~CD~~C~~WfH~~Cv 40 (65)
T 2vpb_A 8 VYPCGICTNEVND---DQDAILCEASCQKWFHRICT 40 (65)
T ss_dssp -CBCTTTCSBCCT---TSCEEEBTTTTCCEEEHHHH
T ss_pred cCcCccCCCccCC---CCCeEecccCccccCchhcc
Confidence 3578899984 43 35899999 99999999995
No 13
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=86.57 E-value=0.24 Score=43.52 Aligned_cols=45 Identities=24% Similarity=0.519 Sum_probs=30.7
Q ss_pred ccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCCCc
Q 005036 392 VCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGHA 451 (717)
Q Consensus 392 IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCgk~ 451 (717)
||.+-++ .-.||.||.|..|-|+.|. |+.... . .+ .|+|..|...
T Consensus 32 iC~~~~~---~~~mi~Cd~C~~w~H~~C~--------~~~~~~--~-p~-~w~C~~C~~~ 76 (98)
T 2lv9_A 32 ICGFTHD---DGYMICCDKCSVWQHIDCM--------GIDRQH--I-PD-TYLCERCQPR 76 (98)
T ss_dssp TTSCCSC---SSCEEEBTTTCBEEETTTT--------TCCTTS--C-CS-SBCCTTTSSS
T ss_pred ECCCccC---CCcEEEcCCCCCcCcCcCC--------CCCccC--C-CC-CEECCCCcCC
Confidence 6766543 3469999999999999996 221110 1 12 6999999643
No 14
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.56 E-value=0.4 Score=40.78 Aligned_cols=62 Identities=29% Similarity=0.643 Sum_probs=44.8
Q ss_pred CcccccC-CCCCCCCCcccccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccc-eEEeccCC
Q 005036 374 DCKICST-NKGFCSSCMCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEM-QFHCIGCG 449 (717)
Q Consensus 374 ~C~IC~~-~~GFCr~CsC~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm-~F~C~aCg 449 (717)
.|+-|-. .+-.|..|.|.||.+-+ ++-.-|.||.|..+-|+.|.- +.+. ...++ ..+|..|-
T Consensus 12 ~c~~C~~~~~w~C~~c~C~vC~~~~---~~~~ll~CD~C~~~yH~~Cl~--------Ppl~---~~P~g~~W~C~~C~ 75 (77)
T 2e6s_A 12 ECDLCGGDPEKKCHSCSCRVCGGKH---EPNMQLLCDECNVAYHIYCLN--------PPLD---KVPEEEYWYCPSCK 75 (77)
T ss_dssp CCTTTCSCSSSCCSSSSCSSSCCCC---CSTTEEECSSSCCEEETTSSS--------SCCS---SCCCSSCCCCTTTC
T ss_pred cChhhcCCCCeECCCCCCcCcCCcC---CCCCEEEcCCCCccccccccC--------CCcc---CCCCCCCcCCcCcc
Confidence 4555653 45689999999999875 456789999999999999952 2111 11244 78999885
No 15
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=84.80 E-value=0.19 Score=41.92 Aligned_cols=49 Identities=24% Similarity=0.466 Sum_probs=32.5
Q ss_pred ccccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCCC
Q 005036 390 CPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGH 450 (717)
Q Consensus 390 C~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCgk 450 (717)
-|||.+-++ +.-.||.||.|.-|-|..|.=-... .......|+|..|-.
T Consensus 12 yCiC~~~~~--~~~~MI~Cd~C~~WfH~~Cvg~~~~----------~~~~~~~~~C~~C~~ 60 (75)
T 3kqi_A 12 YCVCRLPYD--VTRFMIECDACKDWFHGSCVGVEEE----------EAPDIDIYHCPNCEK 60 (75)
T ss_dssp ETTTTEECC--TTSCEEECTTTCCEEEHHHHTCCTT----------TGGGBSSCCCHHHHH
T ss_pred EEECCCcCC--CCCCEEEcCCCCCCEeccccccccc----------ccCCCCEEECCCCcc
Confidence 357877432 2457999999999999999822110 111224799999854
No 16
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=84.45 E-value=0.19 Score=55.27 Aligned_cols=48 Identities=25% Similarity=0.600 Sum_probs=32.1
Q ss_pred ccccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCC
Q 005036 390 CPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCG 449 (717)
Q Consensus 390 C~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCg 449 (717)
.|+|.+-++. .-.||.||.|.-|-|..|. |.. .........|+|..|-
T Consensus 39 yC~C~~~~d~--~~~MIqCd~C~~WfH~~Cv--------gl~--~~~~~~~~~~~C~~C~ 86 (488)
T 3kv5_D 39 YCVCRQPYDV--NRFMIECDICKDWFHGSCV--------GVE--EHHAVDIDLYHCPNCA 86 (488)
T ss_dssp ETTTTEECCT--TSCEEEBTTTCCEEEHHHH--------TCC--GGGGGGEEEBCCHHHH
T ss_pred EEeCCCcCCC--CCCeEEccCCCCceeeeec--------CcC--cccccCCCEEECCCCc
Confidence 3488875321 3469999999999999998 221 0011223579999996
No 17
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=83.77 E-value=0.28 Score=40.69 Aligned_cols=44 Identities=23% Similarity=0.615 Sum_probs=31.5
Q ss_pred ccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCCC
Q 005036 392 VCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGH 450 (717)
Q Consensus 392 IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCgk 450 (717)
||.+-++ +-.||.||.|..|-|+.|.=-.. . .....|+|..|.+
T Consensus 23 iC~~~~~---~~~MIqCd~C~~WfH~~Cvgi~~--------~----~~~~~~~C~~C~~ 66 (68)
T 3o70_A 23 FCMKPFA---GRPMIECNECHTWIHLSCAKIRK--------S----NVPEVFVCQKCRD 66 (68)
T ss_dssp TTCCCCT---TCCEEECTTTCCEEETTTTTCCT--------T----SCCSSCCCHHHHT
T ss_pred ECCCcCC---CCCEEECCCCCccccccccCcCc--------c----cCCCcEECCCCCC
Confidence 7777543 56799999999999999973221 1 1224899998854
No 18
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=83.55 E-value=0.36 Score=45.23 Aligned_cols=45 Identities=4% Similarity=0.071 Sum_probs=33.0
Q ss_pred CCchhhhHHHHhhHHHHHHHHhhHHHHHHHHHhhhHHHHhhhhhh
Q 005036 611 DGFDSLESVVRIKEAEARMFQNKADEARREADEYKRMVCARTEKL 655 (717)
Q Consensus 611 ~~~eeLEsIVRlKqAEA~MFQ~kAdeARrEAE~lqrI~~aK~eK~ 655 (717)
..++|+..=|+|=-.-|.+|-..-.+--+-|..|+.+...+..++
T Consensus 128 ~s~~~f~~D~~li~~Na~~yN~~~s~~~~~A~~L~~~f~~~~~~~ 172 (174)
T 2ri7_A 128 EKLTEFVADMTKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLKGF 172 (174)
T ss_dssp CBHHHHHHHHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 346777777888788888888777777777888877776665544
No 19
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=82.90 E-value=0.45 Score=39.80 Aligned_cols=43 Identities=28% Similarity=0.736 Sum_probs=30.5
Q ss_pred ccccccCCCCccceEecCC--cc-hHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCCCc
Q 005036 392 VCLNFDCANNTCSWVGCDV--CS-HWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGHA 451 (717)
Q Consensus 392 IC~KFD~nkdtc~WIgCd~--Cg-HwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCgk~ 451 (717)
||.+-++ + .+|.||. |. .|-|+.|.=-.. ...+.|+|..|-..
T Consensus 20 ~C~~~~~--g--~MI~CD~~~C~~~wfH~~Cvgl~~-------------~p~g~w~Cp~C~~~ 65 (71)
T 1wen_A 20 LCHQVSY--G--EMIGCDNPDCSIEWFHFACVGLTT-------------KPRGKWFCPRCSQE 65 (71)
T ss_dssp TTCCCSC--S--SEECCSCSSCSCCCEETTTTTCSS-------------CCSSCCCCTTTSSC
T ss_pred ECCCCCC--C--CEeEeeCCCCCCccEecccCCcCc-------------CCCCCEECCCCCcc
Confidence 6777653 2 5999999 77 799999974111 11357999999654
No 20
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=82.74 E-value=0.34 Score=37.86 Aligned_cols=44 Identities=23% Similarity=0.572 Sum_probs=31.2
Q ss_pred cccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCC
Q 005036 391 PVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCG 449 (717)
Q Consensus 391 ~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCg 449 (717)
|||.+-++ +-.+|.||.|..|-|+.|.=-... .....|+|..|.
T Consensus 7 C~C~~~~~---~~~MI~Cd~C~~W~H~~Cvgi~~~------------~~~~~~~C~~C~ 50 (52)
T 3o7a_A 7 CFCMKPFA---GRPMIECNECHTWIHLSCAKIRKS------------NVPEVFVCQKCR 50 (52)
T ss_dssp STTCCBCT---TCCEEECTTTCCEEETTTTTCCGG------------GCCSSCCCHHHH
T ss_pred EEeCCcCC---CCCEEEcCCCCccccccccCCCcc------------cCCCcEECcCCC
Confidence 47877543 568999999999999999632221 112489998874
No 21
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=81.40 E-value=0.95 Score=40.24 Aligned_cols=56 Identities=21% Similarity=0.444 Sum_probs=40.3
Q ss_pred CCCCCCC-cccccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCCC
Q 005036 382 KGFCSSC-MCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGH 450 (717)
Q Consensus 382 ~GFCr~C-sC~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCgk 450 (717)
+-+|..| .|-||..-+. ++-.-|.||.|..+-|+.|--- +.. ...++.++|..|-.
T Consensus 55 ~W~C~~C~~C~vC~~~~~--~~~~ll~Cd~C~~~yH~~Cl~p------~l~-----~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 55 RWQCIECKTCSSCRDQGK--NADNMLFCDSCDRGFHMECCDP------PLT-----RMPKGMWICQICRP 111 (112)
T ss_dssp CCCCTTTCCBTTTCCCCC--TTCCCEECTTTCCEECGGGCSS------CCS-----SCCSSCCCCTTTSC
T ss_pred ccccccCCccccccCcCC--CccceEEcCCCCCeeecccCCC------CCC-----CCCCCCeECCCCCC
Confidence 3589999 8999987533 3345899999999999999421 111 23355899999864
No 22
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=81.37 E-value=0.32 Score=39.96 Aligned_cols=47 Identities=26% Similarity=0.479 Sum_probs=30.0
Q ss_pred ccccccCCCCccceEecCC--cchHHhHHhh-hhcCcccCCCCCCCCCCCccceEEeccCC
Q 005036 392 VCLNFDCANNTCSWVGCDV--CSHWCHAACG-IQRNLIKPGPSLKGPSGTSEMQFHCIGCG 449 (717)
Q Consensus 392 IC~KFD~nkdtc~WIgCd~--CgHwcHldCA-Lr~~~i~~G~~~kG~s~~lDm~F~C~aCg 449 (717)
||.+.+++ -.+|.||. |..|-|+.|. |....+ ......-.|+|..|-
T Consensus 14 ~C~~~~~~---g~mI~CD~~~C~~W~H~~Cvgi~~~~~--------~~~~~p~~~~C~~Cr 63 (68)
T 2rsd_A 14 ICSSTMVN---DSMIQCEDQRCQVWQHLNCVLIPDKPG--------ESAEVPPVFYCELCR 63 (68)
T ss_dssp TTCCCSCC---SCEEECSCTTTCEEEETTTSCCCSSTT--------SCCCCCSSCCCHHHH
T ss_pred ECCCCcCC---CCEEEECCCCCCCeEchhhCCCCcccc--------cccCCCCcEECcCcc
Confidence 67765443 26999995 9999999995 222211 112233479998883
No 23
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=81.36 E-value=0.48 Score=53.00 Aligned_cols=51 Identities=25% Similarity=0.556 Sum_probs=35.4
Q ss_pred CcccccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCCC
Q 005036 388 CMCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGH 450 (717)
Q Consensus 388 CsC~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCgk 450 (717)
|++--++.+. .+...||+||.|.-|-|..|. |... ........|+|..|-.
T Consensus 43 ~s~kk~~~~~--n~~~~mI~CD~C~~WfH~~CV--------gi~~--~~a~~~~~y~Cp~C~~ 93 (528)
T 3pur_A 43 MSKKKSHHHK--KNDFQWIGCDSCQTWYHFLCS--------GLEQ--FEYYLYEKFFCPKCVP 93 (528)
T ss_dssp CSCCCTTTTT--TSTTSEEECTTTCCEEEGGGT--------TCCG--GGTTTEEECCCTTTHH
T ss_pred ccccccccCC--CcCCCEEECCCCCcCCCCcCC--------CCCh--hHhcCCCeEECcCCcC
Confidence 6666666662 255689999999999999995 2220 0123346899999975
No 24
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.18 E-value=0.44 Score=39.80 Aligned_cols=42 Identities=24% Similarity=0.577 Sum_probs=29.5
Q ss_pred ccccccCCCCccceEecCCcc---hHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCCC
Q 005036 392 VCLNFDCANNTCSWVGCDVCS---HWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGH 450 (717)
Q Consensus 392 IC~KFD~nkdtc~WIgCd~Cg---HwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCgk 450 (717)
||.+-++ + .+|.||.|. .|-|++|.=-.. ...+.|+|..|-.
T Consensus 10 ~C~~~~~---g-~MI~CD~cdC~~~WfH~~Cvgl~~-------------~p~~~w~Cp~C~~ 54 (70)
T 1x4i_A 10 ICNQVSY---G-EMVGCDNQDCPIEWFHYGCVGLTE-------------APKGKWYCPQCTA 54 (70)
T ss_dssp TTSCCCC---S-SEECCSCTTCSCCCEEHHHHTCSS-------------CCSSCCCCHHHHH
T ss_pred EcCCCCC---C-CEeEeCCCCCCccCCcccccccCc-------------CCCCCEECCCCCc
Confidence 5776653 3 799999974 899999973111 1246899998854
No 25
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=80.13 E-value=0.38 Score=42.33 Aligned_cols=41 Identities=27% Similarity=0.645 Sum_probs=29.1
Q ss_pred ccccccCCCCccceEecCCcc---hHHhHHhhhhcCcccCCCCCCCCCCCccceEEecc-CC
Q 005036 392 VCLNFDCANNTCSWVGCDVCS---HWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIG-CG 449 (717)
Q Consensus 392 IC~KFD~nkdtc~WIgCd~Cg---HwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~a-Cg 449 (717)
||.+-++ + .+|.||.|. .|-|+.|. |.. ....+.|+|.. |-
T Consensus 30 iC~~~~~--g--~MI~CD~c~C~~eWfH~~CV--------gl~-----~~p~~~W~Cp~cC~ 74 (90)
T 2jmi_A 30 FCRNVSY--G--PMVACDNPACPFEWFHYGCV--------GLK-----QAPKGKWYCSKDCK 74 (90)
T ss_dssp TTTCCCS--S--SEECCCSSSCSCSCEETTTS--------SCS-----SCTTSCCCSSHHHH
T ss_pred EeCCCCC--C--CEEEecCCCCccccCcCccC--------CCC-----cCCCCCccCChhhc
Confidence 6777654 2 499999976 89999997 221 11235899999 84
No 26
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=79.42 E-value=0.91 Score=34.90 Aligned_cols=48 Identities=23% Similarity=0.485 Sum_probs=34.1
Q ss_pred ccccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCCCc
Q 005036 390 CPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGHA 451 (717)
Q Consensus 390 C~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCgk~ 451 (717)
|.||.+.+ ++-.-|.||.|..|-|+.|--- +.. ...++.++|..|-..
T Consensus 3 C~vC~~~~---~~~~ll~Cd~C~~~~H~~Cl~p------~l~-----~~P~g~W~C~~C~~~ 50 (51)
T 1f62_A 3 CKVCRKKG---EDDKLILCDECNKAFHLFCLRP------ALY-----EVPDGEWQCPACQPA 50 (51)
T ss_dssp CTTTCCSS---CCSCCEECTTTCCEECHHHHCT------TCC-----SCCSSCCSCTTTSCC
T ss_pred CCCCCCCC---CCCCEEECCCCChhhCcccCCC------CcC-----CCCCCcEECcCcccc
Confidence 67787765 3457899999999999999632 111 122458999999654
No 27
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=79.29 E-value=0.39 Score=38.78 Aligned_cols=43 Identities=26% Similarity=0.669 Sum_probs=30.1
Q ss_pred cccccccCCCCccceEecCC--cc-hHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCCC
Q 005036 391 PVCLNFDCANNTCSWVGCDV--CS-HWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGH 450 (717)
Q Consensus 391 ~IC~KFD~nkdtc~WIgCd~--Cg-HwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCgk 450 (717)
|||++-++ + .+|.||. |. .|-|+.|.=-.. ...+.|+|..|-+
T Consensus 12 C~C~~~~~---g-~mi~CD~~~C~~~wfH~~Cvgl~~-------------~p~~~w~Cp~C~~ 57 (59)
T 3c6w_A 12 CLCHQVSY---G-EMIGCDNPDCPIEWFHFACVDLTT-------------KPKGKWFCPRCVQ 57 (59)
T ss_dssp TTTTEECC---S-EEEECSCTTCSSCEEETGGGTCSS-------------CCSSCCCCHHHHC
T ss_pred EECCCCCC---C-CeeEeeCCCCCCCCEecccCCccc-------------CCCCCEECcCccC
Confidence 37888653 2 5999999 77 799999974111 1225799998854
No 28
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=79.26 E-value=0.55 Score=41.38 Aligned_cols=43 Identities=28% Similarity=0.724 Sum_probs=30.9
Q ss_pred ccccccCCCCccceEecCC--cc-hHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCCCc
Q 005036 392 VCLNFDCANNTCSWVGCDV--CS-HWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGHA 451 (717)
Q Consensus 392 IC~KFD~nkdtc~WIgCd~--Cg-HwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCgk~ 451 (717)
||.+-++ + .+|.||. |. .|-|+.|.--.. ...+.|+|..|-..
T Consensus 40 iC~~~~~---g-~MI~CD~~dC~~~WfH~~CVgl~~-------------~p~g~W~Cp~C~~~ 85 (91)
T 1weu_A 40 LCHQVSY---G-EMIGCDNPDCSIEWFHFACVGLTT-------------KPRGKWFCPRCSQE 85 (91)
T ss_dssp TTCCBCC---S-CCCCCSCSSCSCCCCCSTTTTCSS-------------CCCSSCCCTTTCCC
T ss_pred ECCCCCC---C-CEeEecCCCCCCCCEecccCCcCc-------------CCCCCEECcCccCc
Confidence 7887653 2 5999999 76 899999974111 11357999999764
No 29
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=77.68 E-value=1.3 Score=39.20 Aligned_cols=61 Identities=25% Similarity=0.518 Sum_probs=40.8
Q ss_pred ccccccccc-CCCCccceEecCCcchHHhHHhhhhcCcccCCCCCCC--CCCCccceEEeccCCCccchh
Q 005036 389 MCPVCLNFD-CANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKG--PSGTSEMQFHCIGCGHASEMF 455 (717)
Q Consensus 389 sC~IC~KFD-~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG--~s~~lDm~F~C~aCgk~SeLl 455 (717)
||-||..|+ .+. +-|.+|+.++|..|-=|-++.+ |....+ -..+++....|.-|+.-.=||
T Consensus 17 ~C~VC~~~t~~~l-----~pCRvC~RvfH~~CL~r~gy~~-~~~a~e~~l~A~T~~GWSC~~CenL~lLL 80 (89)
T 1wil_A 17 MCDVCEVWTAESL-----FPCRVCTRVFHDGCLRRMGYIQ-GDSAAEVTEMAHTETGWSCHYCDNINLLL 80 (89)
T ss_dssp CCTTTCCCCSSCC-----SSCSSSSSCCCHHHHHHHTSCC-CCCCCSCSCCCSSSSSCCCTTTCCCCSSS
T ss_pred ccCccccccccce-----eccccccccccHhhcccccccc-cHHHHHHHHccCCCCCccccccchhhhhc
Confidence 677888884 344 4578999999999988865541 111111 235678889999997665444
No 30
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=77.10 E-value=0.8 Score=46.27 Aligned_cols=65 Identities=25% Similarity=0.613 Sum_probs=42.4
Q ss_pred CCcccccCC-CCCCCCCcccccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccc-eEEeccCCC
Q 005036 373 CDCKICSTN-KGFCSSCMCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEM-QFHCIGCGH 450 (717)
Q Consensus 373 c~C~IC~~~-~GFCr~CsC~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm-~F~C~aCgk 450 (717)
-.|..|--. +-.|..|.|.+|.+-+ ++-.=|.||.|..+-|+.|-- +.+. ...++ ..+|..|-.
T Consensus 159 ~~C~~c~~~~~w~C~~c~C~vC~~~~---~~~~lL~CD~C~~~yH~~CL~--------PPL~---~vP~G~~W~Cp~C~~ 224 (226)
T 3ask_A 159 PSCKHCKDDVNRLCRVCACHLCGGRQ---DPDKQLMCDECDMAFHIYCLD--------PPLS---SVPSEDEWYCPECRN 224 (226)
T ss_dssp CCCTTTTTCTTSCCTTTSCSSSCCCC---C--CCEECSSSCCEECSCC----------CCCC---SCCSSSCCCCGGGC-
T ss_pred cccccccCCcCEecCCCCCcCCCCCC---CCCCeEEcCCCCcceeCccCC--------CCcc---cCCCCCCCCCcCCcC
Confidence 345555332 4589999999999865 345668999999999999952 2111 11244 899999964
Q ss_pred c
Q 005036 451 A 451 (717)
Q Consensus 451 ~ 451 (717)
.
T Consensus 225 ~ 225 (226)
T 3ask_A 225 D 225 (226)
T ss_dssp -
T ss_pred c
Confidence 3
No 31
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=76.87 E-value=0.51 Score=38.10 Aligned_cols=43 Identities=28% Similarity=0.712 Sum_probs=30.1
Q ss_pred cccccccCCCCccceEecCC--cc-hHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCCC
Q 005036 391 PVCLNFDCANNTCSWVGCDV--CS-HWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGH 450 (717)
Q Consensus 391 ~IC~KFD~nkdtc~WIgCd~--Cg-HwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCgk 450 (717)
|||.+-++ + ..|.||. |. .|-|+.|.--.. ...+.|+|..|-.
T Consensus 13 C~C~~~~~--g--~mi~CD~cdC~~~wfH~~Cvgl~~-------------~p~g~w~C~~C~~ 58 (60)
T 2vnf_A 13 CLCHQVSY--G--EMIGCDNPDCSIEWFHFACVGLTT-------------KPRGKWFCPRCSQ 58 (60)
T ss_dssp TTTTEECC--S--EEEECSCTTCSSCEEETGGGTCSS-------------CCSSCCCCHHHHC
T ss_pred EECCCcCC--C--CEEEeCCCCCCCceEehhcCCCCc-------------CCCCCEECcCccC
Confidence 37888763 2 5999999 66 899999974111 1135799998843
No 32
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=75.46 E-value=0.59 Score=38.17 Aligned_cols=42 Identities=24% Similarity=0.672 Sum_probs=29.9
Q ss_pred ccccccCCCCccceEecCC--cc-hHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCCC
Q 005036 392 VCLNFDCANNTCSWVGCDV--CS-HWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGH 450 (717)
Q Consensus 392 IC~KFD~nkdtc~WIgCd~--Cg-HwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCgk 450 (717)
||++-++ + .+|.||. |. .|-|+.|.=-.. ...+.|+|..|-+
T Consensus 15 ~C~~~~~---g-~MI~CD~c~C~~~WfH~~Cvgl~~-------------~p~~~w~Cp~C~~ 59 (62)
T 2g6q_A 15 LCNQVSY---G-EMIGCDNEQCPIEWFHFSCVSLTY-------------KPKGKWYCPKCRG 59 (62)
T ss_dssp TTTEECC---S-EEEECSCTTCSSCEEETGGGTCSS-------------CCSSCCCCHHHHT
T ss_pred ECCCCCC---C-CeeeeeCCCCCcccEecccCCcCc-------------CCCCCEECcCccc
Confidence 7888653 3 5999999 55 999999974211 1236899998854
No 33
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=75.31 E-value=0.43 Score=52.17 Aligned_cols=49 Identities=22% Similarity=0.453 Sum_probs=33.5
Q ss_pred ccccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCCC
Q 005036 390 CPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGH 450 (717)
Q Consensus 390 C~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCgk 450 (717)
.|||.+-++ +.-.||.||.|.-|-|..|.=-... .......|+|..|-.
T Consensus 7 yCiC~~~~d--~~~~MIqCD~C~~WfH~~CVgi~~~----------~~~~~~~y~C~~C~~ 55 (447)
T 3kv4_A 7 YCLCRLPYD--VTRFMIECDMCQDWFHGSCVGVEEE----------KAADIDLYHCPNCEV 55 (447)
T ss_dssp ETTTTEECC--TTSCEEECTTTCCEEEHHHHTCCHH----------HHTTEEECCCHHHHH
T ss_pred EEeCCCcCC--CCCCeEEcCCCCcccccccCCcCcc----------cccCCCEEECCCCcc
Confidence 578887532 2467999999999999999711110 011225899999954
No 34
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=72.96 E-value=20 Score=40.37 Aligned_cols=85 Identities=25% Similarity=0.250 Sum_probs=46.8
Q ss_pred HhhHHHHHHHHHhhhHHHHhh---hhhhHHHHHHHhhhhhhhHHHHHHHHhHHHHHH--------HHhhhcchHHHH--H
Q 005036 631 QNKADEARREADEYKRMVCAR---TEKLEEEYAHKLSKLCLRETEERRRKKLEELKV--------LEDSHCDYLKMK--R 697 (717)
Q Consensus 631 Q~kAdeARrEAE~lqrI~~aK---~eK~EEEYas~~~Kl~l~EaEe~r~~~~Eelk~--------~E~s~~d~~~mk--r 697 (717)
+.||..|++|++.|.....-= .+.-|..|-.++..|.- ..|++|+++++|.+. ++.--.+=++=+ .
T Consensus 493 ~~~~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~~ql~~-kme~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~~~~~~ 571 (592)
T 1f5n_A 493 RVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTE-KMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRI 571 (592)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567777888888777553322 23334556666654432 577777777766532 222222222333 6
Q ss_pred HHHHHHHHHHHHHHhhhhc
Q 005036 698 MQAEIAGLLERMEATKQQW 716 (717)
Q Consensus 698 M~~~I~~LL~~MEatK~~~ 716 (717)
|+.+|++|=.++...+..|
T Consensus 572 ~~~ei~~l~~~~~~~~~~~ 590 (592)
T 1f5n_A 572 MKNEIQDLQTKMRRRKACT 590 (592)
T ss_dssp HHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHhhccCCCCc
Confidence 9999999988865544444
No 35
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=65.64 E-value=56 Score=35.14 Aligned_cols=35 Identities=17% Similarity=0.096 Sum_probs=20.8
Q ss_pred CchhhhHHHHhhHHHHHHHHhhHHHHHHHHHhhhH
Q 005036 612 GFDSLESVVRIKEAEARMFQNKADEARREADEYKR 646 (717)
Q Consensus 612 ~~eeLEsIVRlKqAEA~MFQ~kAdeARrEAE~lqr 646 (717)
++++++..|+--++|..|.+......+.+.+..+.
T Consensus 457 e~~~~~~~i~~l~~~~~~~~~~l~~~~~~i~~~~~ 491 (597)
T 3oja_B 457 EVNELRAEVQQLTNEQIQQEQLLQGLHAEIDTNLR 491 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 34556666666666666666666666666655443
No 36
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=64.71 E-value=1.7 Score=37.77 Aligned_cols=17 Identities=35% Similarity=1.095 Sum_probs=15.1
Q ss_pred ceEecCCcchHHhHHhh
Q 005036 404 SWVGCDVCSHWCHAACG 420 (717)
Q Consensus 404 ~WIgCd~CgHwcHldCA 420 (717)
+.|.||.|+.|.|-.|-
T Consensus 1 ~mi~c~~c~~w~H~~c~ 17 (140)
T 2ku7_A 1 SMMQCGKCDRWVHSKCE 17 (140)
T ss_dssp CCCCCSCCSSCHHHHHC
T ss_pred CccccccCCCccCCccc
Confidence 46899999999999993
No 37
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=63.90 E-value=2.9 Score=36.67 Aligned_cols=54 Identities=22% Similarity=0.544 Sum_probs=38.7
Q ss_pred CCCCCCC-cccccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCC
Q 005036 382 KGFCSSC-MCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCG 449 (717)
Q Consensus 382 ~GFCr~C-sC~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCg 449 (717)
.-||..| .|.+|.+.+++ -.-|.||.|..+-|+.|---. + . ...++.++|..|-
T Consensus 48 ~W~C~~C~~C~~C~~~~~~---~~ll~Cd~C~~~yH~~Cl~pp-l-------~---~~P~g~W~C~~C~ 102 (111)
T 2ysm_A 48 GWQCPECKVCQNCKQSGED---SKMLVCDTCDKGYHTFCLQPV-M-------K---SVPTNGWKCKNCR 102 (111)
T ss_dssp TCCCTTTCCCTTTCCCSCC---TTEEECSSSCCEEEGGGSSSC-C-------S---SCCSSCCCCHHHH
T ss_pred CccCCcCCcccccCccCCC---CCeeECCCCCcHHhHHhcCCc-c-------c---cCCCCCcCCcCCc
Confidence 4689999 69999988643 358999999999999996321 1 0 1123578887774
No 38
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=61.19 E-value=3.2 Score=34.29 Aligned_cols=35 Identities=17% Similarity=0.413 Sum_probs=25.3
Q ss_pred eEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCCC
Q 005036 405 WVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGH 450 (717)
Q Consensus 405 WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCgk 450 (717)
-|.||.|..+-|+.|.-- .+. ...++.++|..|-.
T Consensus 24 ll~Cd~C~~~~H~~Cl~P-~l~----------~~P~g~W~C~~C~~ 58 (66)
T 2lri_C 24 VLRCTHCAAAFHWRCHFP-AGT----------SRPGTGLRCRSCSG 58 (66)
T ss_dssp CEECSSSCCEECHHHHCT-TTC----------CCCSSSCCCTTTTT
T ss_pred EEECCCCCCceecccCCC-ccC----------cCCCCCEECccccC
Confidence 799999999999999521 110 12345799999954
No 39
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=61.15 E-value=3.3 Score=34.58 Aligned_cols=34 Identities=26% Similarity=0.629 Sum_probs=26.4
Q ss_pred CCCCCCCCCcccccccccCCCCccceEecCCcchHHhHHhhhh
Q 005036 380 TNKGFCSSCMCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQ 422 (717)
Q Consensus 380 ~~~GFCr~CsC~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr 422 (717)
..+.||-.|.-.| .--++.|..|+..||-.|+-+
T Consensus 33 ~~pt~C~~C~~~l---------~~qG~kC~~C~~~cHkkC~~~ 66 (72)
T 2fnf_X 33 GGPGWCDLCGREV---------LRQALRCANCKFTCHSECRSL 66 (72)
T ss_dssp SSCCBCTTTSSBC---------SSCCEECTTSSCEECTGGGGG
T ss_pred CCCcchhhhhHHH---------HhCcCccCCCCCeechhhhcc
Confidence 3567887777777 235789999999999999743
No 40
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=60.53 E-value=2.5 Score=37.67 Aligned_cols=52 Identities=25% Similarity=0.504 Sum_probs=37.8
Q ss_pred CCCCCC-cccccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccC
Q 005036 383 GFCSSC-MCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGC 448 (717)
Q Consensus 383 GFCr~C-sC~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aC 448 (717)
-+|..| .|-||.+-+ ++-.-|.||.|..+-|+.|.-- .+. ...++.++|..|
T Consensus 53 W~C~~C~~C~~C~~~~---~~~~ll~Cd~C~~~yH~~Cl~p--------pl~---~~P~g~W~C~~C 105 (114)
T 2kwj_A 53 WQCIECKSCILCGTSE---NDDQLLFCDDCDRGYHMYCLNP--------PVA---EPPEGSWSCHLC 105 (114)
T ss_dssp CCCGGGCCCTTTTCCT---TTTTEEECSSSCCEEETTTSSS--------CCS---SCCSSCCCCHHH
T ss_pred cCccccCccCcccccC---CCCceEEcCCCCccccccccCC--------Ccc---CCCCCCeECccc
Confidence 478888 799998875 3346799999999999999531 111 123457889888
No 41
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=58.30 E-value=4 Score=34.12 Aligned_cols=48 Identities=25% Similarity=0.525 Sum_probs=33.2
Q ss_pred CcccccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCC
Q 005036 388 CMCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCG 449 (717)
Q Consensus 388 CsC~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCg 449 (717)
..|.||.+.+.. ++-.-|.||.|..|-|+.|-- +. .-.++.++|..|-
T Consensus 17 ~~C~vC~~~~s~-~~~~ll~CD~C~~~~H~~Cl~--------~~-----~vP~g~W~C~~C~ 64 (71)
T 2ku3_A 17 AVCSICMDGESQ-NSNVILFCDMCNLAVHQECYG--------VP-----YIPEGQWLCRHCL 64 (71)
T ss_dssp CSCSSSCCCCCC-SSSCEEECSSSCCEEEHHHHT--------CS-----SCCSSCCCCHHHH
T ss_pred CCCCCCCCCCCC-CCCCEEECCCCCCccccccCC--------CC-----cCCCCCcCCccCc
Confidence 356777776422 344679999999999999952 21 1235689998883
No 42
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=58.26 E-value=3.2 Score=35.85 Aligned_cols=49 Identities=24% Similarity=0.522 Sum_probs=33.8
Q ss_pred CcccccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCCC
Q 005036 388 CMCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGH 450 (717)
Q Consensus 388 CsC~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCgk 450 (717)
-.|.||...+. .+.-.-|.||.|..|-|+.|---. ...++.++|..|-.
T Consensus 26 ~~C~vC~~~~s-~~~~~ll~CD~C~~~fH~~Cl~p~-------------~vP~g~W~C~~C~~ 74 (88)
T 2l43_A 26 AVCSICMDGES-QNSNVILFCDMCNLAVHQECYGVP-------------YIPEGQWLCRHCLQ 74 (88)
T ss_dssp CCCSSCCSSSS-CSEEEEEECSSSCCCCCHHHHTCS-------------SCCSSCCCCHHHHH
T ss_pred CcCCcCCCCCC-CCCCCEEECCCCCchhhcccCCCC-------------ccCCCceECccccC
Confidence 35667766532 245578999999999999995321 12346899999943
No 43
>3g9g_A Suppressor of yeast profilin deletion; SYP1, BAR domain, FCH, adaptor, endocytosis, phosphoprotein; 2.40A {Saccharomyces cerevisiae}
Probab=54.99 E-value=51 Score=34.14 Aligned_cols=85 Identities=14% Similarity=0.175 Sum_probs=53.9
Q ss_pred HHHHHhhHHHHHHHHHhhhHHHHhhh-----------h----hhHHHH--------------------HHHhhhhhhhHH
Q 005036 627 ARMFQNKADEARREADEYKRMVCART-----------E----KLEEEY--------------------AHKLSKLCLRET 671 (717)
Q Consensus 627 A~MFQ~kAdeARrEAE~lqrI~~aK~-----------e----K~EEEY--------------------as~~~Kl~l~Ea 671 (717)
|++|+.||+-=+.=|.+|++++.--. + +.||+. +.++++++..-+
T Consensus 63 ~~f~kERa~IEe~YakqLrkLakk~~~l~k~~~~~~~~~~vlt~ee~~~~~~~e~G~l~~~W~~v~~e~e~~a~~H~~la 142 (287)
T 3g9g_A 63 YLLFKELANLKRNYAQQLRKIIAENEDITKILNAQMIESNVLTPQEMSAFRFNSLGELRNVWDTVIEELKSDLKSSTEYY 142 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHTTSSCHHHHHHCCCCCSTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhccccccchhhccccccccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68899999888888889998887421 1 123332 234445555555
Q ss_pred HHHHHHhHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHH
Q 005036 672 EERRRKKLEELKVLEDSHCDYLKMKRMQAEIAGLLERMEA 711 (717)
Q Consensus 672 Ee~r~~~~Eelk~~E~s~~d~~~mkrM~~~I~~LL~~MEa 711 (717)
+..+..+...|+..-.....+..+++++.++..+-+.||.
T Consensus 143 ~~L~~ev~~pL~~~~e~~~~~~e~~~l~~~L~~~ak~le~ 182 (287)
T 3g9g_A 143 NTLDQQVVRELKESVENNTSWRESKDLHSKLSKNAASIEH 182 (287)
T ss_dssp HHHHHHTHHHHHCSSSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555555554433333566667899999999888884
No 44
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=51.27 E-value=5.8 Score=37.58 Aligned_cols=44 Identities=7% Similarity=0.030 Sum_probs=33.9
Q ss_pred CCchhhhHHHHhhHHHHHHHHhhHHHHHHHHHhhhHHHHhhhhh
Q 005036 611 DGFDSLESVVRIKEAEARMFQNKADEARREADEYKRMVCARTEK 654 (717)
Q Consensus 611 ~~~eeLEsIVRlKqAEA~MFQ~kAdeARrEAE~lqrI~~aK~eK 654 (717)
..++|+..=|+|=-.-|.+|-..-.+--+-|..|+.+...+.++
T Consensus 138 ~s~~ef~~Dv~li~~Na~~yN~~~s~v~~~a~~L~~~f~~~~~~ 181 (184)
T 3o36_A 138 SKPEDFVADFRLIFQNCAEFNEPDSEVANAGIKLENYFEELLKN 181 (184)
T ss_dssp CSHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 45788888888888889999887777788888888776655443
No 45
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=49.43 E-value=4.9 Score=44.77 Aligned_cols=27 Identities=30% Similarity=0.523 Sum_probs=0.0
Q ss_pred ceEecCCcchHHhHHhhhhcCcccCCC
Q 005036 404 SWVGCDVCSHWCHAACGIQRNLIKPGP 430 (717)
Q Consensus 404 ~WIgCd~CgHwcHldCALr~~~i~~G~ 430 (717)
-++.|..|+..||-.|.-+-...++|.
T Consensus 64 qg~~C~~C~~~~H~~C~~~v~~~c~~~ 90 (674)
T 3pfq_A 64 QGFQCQVCSFVVHKRCHEFVTFSCPGA 90 (674)
T ss_dssp ---------------------------
T ss_pred ceeECCCCCCCcChhhcCcCcccCCCc
Confidence 357899999999999965544444443
No 46
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=49.42 E-value=5.1 Score=38.77 Aligned_cols=38 Identities=16% Similarity=0.058 Sum_probs=21.7
Q ss_pred CCchhhhHHHHhhHHHHHHHHhhHHHHHHHHHhhhHHH
Q 005036 611 DGFDSLESVVRIKEAEARMFQNKADEARREADEYKRMV 648 (717)
Q Consensus 611 ~~~eeLEsIVRlKqAEA~MFQ~kAdeARrEAE~lqrI~ 648 (717)
..++++..=|+|==.-|.+|-..-.+...-|+.|....
T Consensus 139 ~s~~~f~~Dv~li~~Na~~yN~~~s~v~~~A~~l~~~~ 176 (207)
T 3u5n_A 139 QIPDDFVADVRLIFKNCERFNEMMKVVQVYADTQEINL 176 (207)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHC----------
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHhcc
Confidence 45788888888888888888876556666666655543
No 47
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=48.24 E-value=5.1 Score=32.00 Aligned_cols=34 Identities=26% Similarity=0.629 Sum_probs=25.9
Q ss_pred CCCCCCCCCcccccccccCCCCccceEecCCcchHHhHHhhhh
Q 005036 380 TNKGFCSSCMCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQ 422 (717)
Q Consensus 380 ~~~GFCr~CsC~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr 422 (717)
..++||-.|.-.| .-.++.|..|+..||-.|+-+
T Consensus 20 ~~pt~C~~C~~~i---------~kqg~kC~~C~~~cH~kC~~~ 53 (59)
T 1rfh_A 20 GGPGWCDLCGREV---------LRQALRCANCKFTCHSECRSL 53 (59)
T ss_dssp SCCEECTTTCSEE---------CSCCEECTTTSCEECHHHHTT
T ss_pred CCCeEchhcchhh---------hhCccEeCCCCCeEehhhhhh
Confidence 3567877777666 135689999999999999743
No 48
>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC domain, vesicle trafficking, membrane curvature, endocytosis, exocytosis, F-BAR domain; 2.30A {Homo sapiens}
Probab=43.61 E-value=88 Score=30.20 Aligned_cols=18 Identities=11% Similarity=0.289 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHhhhh
Q 005036 698 MQAEIAGLLERMEATKQQ 715 (717)
Q Consensus 698 M~~~I~~LL~~MEatK~~ 715 (717)
.+.++++.+..++.+|+.
T Consensus 127 ~~~~~~~~~~~l~Kak~~ 144 (276)
T 2v0o_A 127 AVQTIQSITQALQKSKEN 144 (276)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 444555555666666543
No 49
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=42.29 E-value=68 Score=38.61 Aligned_cols=28 Identities=11% Similarity=0.165 Sum_probs=0.4
Q ss_pred ccCCCCchhhhHHHHhhHHHHHHHHhhH
Q 005036 607 LSKNDGFDSLESVVRIKEAEARMFQNKA 634 (717)
Q Consensus 607 ~~Kk~~~eeLEsIVRlKqAEA~MFQ~kA 634 (717)
..-+..++||+.-+..+++|....+.++
T Consensus 924 ~~LE~kl~eLq~rL~~~e~~n~~L~~~~ 951 (1080)
T 2dfs_A 924 IGLENKIMQLQRKIDEQNKEYKSLLEKM 951 (1080)
T ss_dssp ---------------------------C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344556666665555555555555443
No 50
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=41.70 E-value=7.8 Score=34.02 Aligned_cols=43 Identities=16% Similarity=0.315 Sum_probs=28.1
Q ss_pred CccceEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCCC
Q 005036 401 NTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGH 450 (717)
Q Consensus 401 dtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCgk 450 (717)
.+..+|.|++|..|-|..|.=-... +.+ ...+...|.|..|-.
T Consensus 71 ~~~~m~~C~~C~~~~H~~C~~~~~~---~~~----~~~~~~~~~C~~C~~ 113 (117)
T 4bbq_A 71 FEKKLMECCICNEIVHPGCLQMDGE---GLL----NEELPNCWECPKCYQ 113 (117)
T ss_dssp GGGSCEEETTTCCEECGGGCCSCCC---CEE----CSSSSSEEECTTTC-
T ss_pred cCcceEEeeecCCeEECCCCCCCcc---ccc----cccCCCCeECCCCcC
Confidence 3566999999999999999632110 111 123444699999964
No 51
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=40.51 E-value=67 Score=43.14 Aligned_cols=109 Identities=14% Similarity=0.164 Sum_probs=52.0
Q ss_pred CcchHHhHHhhhhcC-----cccCCCCCCCCCCCc----------cceEEeccCCC---ccchhhhHHHHHhhhhhcch-
Q 005036 410 VCSHWCHAACGIQRN-----LIKPGPSLKGPSGTS----------EMQFHCIGCGH---ASEMFGFVKDVFLHCAKDWG- 470 (717)
Q Consensus 410 ~CgHwcHldCALr~~-----~i~~G~~~kG~s~~l----------Dm~F~C~aCgk---~SeLlG~VKkvf~~ca~~w~- 470 (717)
.+-|.|.++=.|+.. ++|. ||+|.. ++...=+.-.+ .+|...-+|+++..|.-.-.
T Consensus 1631 aleHv~RI~RIL~qp~GhaLLVGv-----gGSGkqSLtrLAa~i~~~~vfqi~i~k~Y~~~~f~eDLk~l~~~aG~~~~~ 1705 (3245)
T 3vkg_A 1631 VLDHILRIDRVFRQPQGHALLIGV-----SGGGKSVLSRFVAWMNGLSIYTIKVNNNYKSSDFDDDLRMLLKRAGCKEEK 1705 (3245)
T ss_dssp HHHHHHHHHHHHTSTTCCEEEEES-----TTSSHHHHHHHHHHHTTCEEECCC----CCHHHHHHHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHHHccCCCCeEEecC-----CCCcHHHHHHHHHHHhCCeeEEEeeeCCCCHHHHHHHHHHHHHHHhcCCCC
Confidence 788999999888876 3433 344432 22222222333 34566667788887743211
Q ss_pred -------hhhH-HHhhhhhhhhcccCCC---cchhHHHHHHHHHHHHHhc-CC--CCchhHHHHHHH
Q 005036 471 -------LDTF-VKELDCVTKIFKGSND---FKGKELQKKAAELVSKLEN-KV--MSPSEACNFIIR 523 (717)
Q Consensus 471 -------~d~L-~keL~lv~rIfrGSed---~rGK~L~~~veeal~KLe~-~~--v~~~d~~~~Il~ 523 (717)
-.++ ..-|+.+.-||..-+= |.+-++..++..+....+. |. -++.+.|++.+.
T Consensus 1706 ~vFL~tD~qi~~e~FLE~IN~lL~sGEVP~LF~~dE~~~i~~~~r~~a~~~g~~~dt~~~l~~~Fi~ 1772 (3245)
T 3vkg_A 1706 ICFIFDESNVLESSFLERMNTLLAGGEVPGLFEGEEFTALMHACKETAQRNGLILDSEEELYKYFTS 1772 (3245)
T ss_dssp EEEEEEGGGCSSTHHHHHHHHHHHHSCCTTSSCTTTHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHH
T ss_pred EEEEEeccccccHHHHHHHHHHhccCCccccCCHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHH
Confidence 0000 2335555555543322 3334445555544443332 31 134566664433
No 52
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=40.49 E-value=1.3e+02 Score=40.65 Aligned_cols=20 Identities=15% Similarity=0.433 Sum_probs=8.6
Q ss_pred CCCcchhHHHHHHHHHHHHH
Q 005036 488 SNDFKGKELQKKAAELVSKL 507 (717)
Q Consensus 488 Sed~rGK~L~~~veeal~KL 507 (717)
|+.|.-..+.+-+..++.+-
T Consensus 1680 ~k~Y~~~~f~eDLk~l~~~a 1699 (3245)
T 3vkg_A 1680 NNNYKSSDFDDDLRMLLKRA 1699 (3245)
T ss_dssp ---CCHHHHHHHHHHHHHHH
T ss_pred eCCCCHHHHHHHHHHHHHHH
Confidence 44454455555555555443
No 53
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=39.51 E-value=8.5 Score=30.56 Aligned_cols=44 Identities=27% Similarity=0.543 Sum_probs=30.0
Q ss_pred cccccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCC
Q 005036 389 MCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCG 449 (717)
Q Consensus 389 sC~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCg 449 (717)
.|.+|.+.+ ..|.||.|..|-|+.|.--.- . ....+.++|..|-
T Consensus 7 ~C~vC~~~g------~ll~Cd~C~~~fH~~Cl~ppl--------~---~~p~g~W~C~~C~ 50 (60)
T 2puy_A 7 FCSVCRKSG------QLLMCDTCSRVYHLDCLDPPL--------K---TIPKGMWICPRCQ 50 (60)
T ss_dssp SCTTTCCCS------SCEECSSSSCEECGGGSSSCC--------S---SCCCSCCCCHHHH
T ss_pred CCcCCCCCC------cEEEcCCCCcCEECCcCCCCc--------C---CCCCCceEChhcc
Confidence 356666542 689999999999999964211 1 1223589999883
No 54
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=39.11 E-value=28 Score=34.81 Aligned_cols=143 Identities=17% Similarity=0.282 Sum_probs=81.2
Q ss_pred HhccHHHHHHHHHhhhHHHHHHHHHHHHHhhcCchh-hHHHHHHHHHhhhcCCCCHHHHhhhh-hhHHHHHHHHHhcccc
Q 005036 260 VSEAIPIMAQIIQELSDETLESVKEYLKNLFLMSEK-REELMALKKRLERRSDLSKETLSKCH-KDQLAILVAVKMGLGS 337 (717)
Q Consensus 260 vse~v~v~a~~~~em~~e~le~lKe~lr~il~~~dk-r~e~~~LQk~lq~RsDLT~e~L~kah-r~QLEILVAikTGi~~ 337 (717)
+++++.-+| -.++.+-|+.+|.-|..|+...+. .... .+|.-+..++...|.+.. -.-|.-||.-|==..
T Consensus 82 ~~d~~~kla---T~yt~~Ei~~fk~lle~i~~s~~~~~s~~----~~lnl~~~~~~k~l~~~eae~lL~~lv~~gWl~~- 153 (238)
T 3nw0_A 82 ATTSISKMA---TDFAENELDLFRKALELIIDSETGFASST----NILNLVDQLKGKKMRKKEAEQVLQKFVQNKWLIE- 153 (238)
T ss_dssp SSCTTHHHH---TTSCHHHHHHHHHHHHHHHHSSSSCEEHH----HHHGGGTTCSSSCCCHHHHHHHHHHHHHTTSEEE-
T ss_pred CCCHHHhhc---cCCCHHHHHHHHHHHHHHHhCCCCceeHH----HHHHHHhhcccCCCCHHHHHHHHHHHHHhcchhh-
Confidence 346666666 456777899999999999965332 1111 123333444434444333 344667777553222
Q ss_pred cccCCCCCCcchhHHHhhhccccccccccCCCCCCCCcccccCCCCCCCCCcccccccccCCCCccceEecCCcchHHhH
Q 005036 338 FLSAKIQLPVNKLVEIFLYMRCRNVNCQSILPVDDCDCKICSTNKGFCSSCMCPVCLNFDCANNTCSWVGCDVCSHWCHA 417 (717)
Q Consensus 338 Fl~~~~~i~~s~LvEiFl~~rCRN~aCrs~Lp~dDc~C~IC~~~~GFCr~CsC~IC~KFD~nkdtc~WIgCd~CgHwcHl 417 (717)
..+...++.-.|+|.-.+.+..=. ++ --.|.||+..-. .+ +.|..|++.-|.
T Consensus 154 -~~g~~~l~~R~l~El~~~l~~~~~--------~~--------------i~~C~iC~~iv~-~g----~~C~~C~~~~H~ 205 (238)
T 3nw0_A 154 -KEGEFTLHGRAILEMEQYIRETYP--------DA--------------VKICNICHSLLI-QG----QSCETCGIRMHL 205 (238)
T ss_dssp -ETTEEEECHHHHHHHHHHHHHHCT--------TT--------------CCBCTTTCSBCS-SC----EECSSSCCEECH
T ss_pred -hCCEEEecCccHHHHHHHHHHhcC--------CC--------------CCcCcchhhHHh-CC----cccCccChHHHH
Confidence 244455555567776666554311 11 223555655422 11 788889999999
Q ss_pred HhhhhcCcccCCCCCCCCCCCccceEEeccCCCc
Q 005036 418 ACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGHA 451 (717)
Q Consensus 418 dCALr~~~i~~G~~~kG~s~~lDm~F~C~aCgk~ 451 (717)
.|.-+-... -..-.|..|+..
T Consensus 206 ~C~~~~~~~-------------~~~~~CP~C~~~ 226 (238)
T 3nw0_A 206 PCVAKYFQS-------------NAEPRCPHCNDY 226 (238)
T ss_dssp HHHHHHTTT-------------CSSCBCTTTCCB
T ss_pred HHHHHHHHh-------------CCCCCCCCCCCC
Confidence 999665421 013457778764
No 55
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=38.18 E-value=12 Score=29.97 Aligned_cols=45 Identities=24% Similarity=0.491 Sum_probs=30.8
Q ss_pred cccccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCCC
Q 005036 389 MCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGH 450 (717)
Q Consensus 389 sC~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCgk 450 (717)
.|.+|.+. -.-|.||.|-.|-|+.|---... ...++.++|..|-+
T Consensus 13 ~C~vC~~~------g~ll~CD~C~~~fH~~Cl~p~l~-----------~~p~g~W~C~~C~~ 57 (61)
T 2l5u_A 13 YCEVCQQG------GEIILCDTCPRAYHMVCLDPDME-----------KAPEGKWSCPHCEK 57 (61)
T ss_dssp SCTTTSCC------SSEEECSSSSCEEEHHHHCTTCC-----------SCCCSSCCCTTGGG
T ss_pred CCccCCCC------CcEEECCCCChhhhhhccCCCCC-----------CCCCCceECccccc
Confidence 34555553 26899999999999999643210 12346899999964
No 56
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.90 E-value=7.2 Score=33.86 Aligned_cols=47 Identities=28% Similarity=0.557 Sum_probs=33.3
Q ss_pred cccccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCC
Q 005036 389 MCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCG 449 (717)
Q Consensus 389 sC~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCg 449 (717)
.|.||.+-+ ++-.-|.||.|..|-|+.|.- +.+. ...++.++|..|-
T Consensus 18 ~C~vC~~~~---~~~~ll~CD~C~~~~H~~Cl~--------Ppl~---~~P~g~W~C~~C~ 64 (92)
T 2e6r_A 18 ICQVCSRGD---EDDKLLFCDGCDDNYHIFCLL--------PPLP---EIPRGIWRCPKCI 64 (92)
T ss_dssp CCSSSCCSG---GGGGCEECTTTCCEECSSSSS--------SCCS---SCCSSCCCCHHHH
T ss_pred CCccCCCcC---CCCCEEEcCCCCchhccccCC--------CCcc---cCCCCCcCCccCc
Confidence 577888765 356899999999999999962 1111 1224579998884
No 57
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=35.93 E-value=15 Score=27.62 Aligned_cols=36 Identities=19% Similarity=0.419 Sum_probs=24.0
Q ss_pred CCCCCCCCcccccccccCCCCccceEecCCcchHHhHHhhhh
Q 005036 381 NKGFCSSCMCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQ 422 (717)
Q Consensus 381 ~~GFCr~CsC~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr 422 (717)
.|.||.-|.=.|=. . .--.+.|..|+..+|-.|+-+
T Consensus 10 ~pt~C~~C~~~l~g---~---~~qg~~C~~C~~~~H~~C~~~ 45 (50)
T 1ptq_A 10 SPTFCDHCGSLLWG---L---VKQGLKCEDCGMNVHHKCREK 45 (50)
T ss_dssp SCCBCTTTCCBCCS---S---SSCEEEETTTCCEECHHHHTT
T ss_pred CCCCcCCCCceeec---c---CCccCEeCCCCCeECHHHhhh
Confidence 46677666444411 1 125678999999999999753
No 58
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.51 E-value=7.5 Score=30.52 Aligned_cols=44 Identities=27% Similarity=0.543 Sum_probs=29.3
Q ss_pred cccccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCC
Q 005036 389 MCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCG 449 (717)
Q Consensus 389 sC~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCg 449 (717)
.|.+|.+.+ ..|.||.|..|-|+.|.--.- . ...++.++|..|-
T Consensus 11 ~C~vC~~~g------~ll~Cd~C~~~~H~~Cl~ppl--------~---~~p~g~W~C~~C~ 54 (56)
T 2yql_A 11 FCSVCRKSG------QLLMCDTCSRVYHLDCLDPPL--------K---TIPKGMWICPRCQ 54 (56)
T ss_dssp SCSSSCCSS------CCEECSSSSCEECSSSSSSCC--------C---SCCCSSCCCHHHH
T ss_pred CCccCCCCC------eEEEcCCCCcceECccCCCCc--------C---CCCCCceEChhhh
Confidence 355666542 689999999999999964211 1 1123578888874
No 59
>2dkt_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.89.1.1 g.93.1.1 PDB: 2k2c_A
Probab=35.30 E-value=17 Score=34.64 Aligned_cols=63 Identities=32% Similarity=0.778 Sum_probs=36.5
Q ss_pred cccccCCCCCCCCcccccCCCCCCCCCcccccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccc
Q 005036 362 VNCQSILPVDDCDCKICSTNKGFCSSCMCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEM 441 (717)
Q Consensus 362 ~aCrs~Lp~dDc~C~IC~~~~GFCr~CsC~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm 441 (717)
..|+..+|+.+ .|.-|-.. |=+. -|-||.-||.+++.|-=-.|.+|- + | +-+.
T Consensus 62 g~C~~~q~~~~-~C~~Cg~~--f~~Y-~C~~C~l~d~~k~~yHC~~CgiCR-------------~--G--------~~~~ 114 (143)
T 2dkt_A 62 INCEKLQHAQQ-TCEDCSTL--FGEY-YCSICHLFDKDKRQYHCESCGICR-------------I--G--------PKED 114 (143)
T ss_dssp SSSCCEECSCS-BCSSSCCB--SCSE-ECSSSCCEECSSSEEEETTTTEEE-------------E--S--------CGGG
T ss_pred cccCccccccC-cCCCCCcc--ceee-EeceeecccCCCceecCCCCCcee-------------c--c--------CCcC
Confidence 35666777665 23322110 1001 277888889888886655555552 1 2 2477
Q ss_pred eEEeccCCCc
Q 005036 442 QFHCIGCGHA 451 (717)
Q Consensus 442 ~F~C~aCgk~ 451 (717)
-|||-.||-=
T Consensus 115 ffHC~~C~~C 124 (143)
T 2dkt_A 115 FFHCLKCNLC 124 (143)
T ss_dssp EEEETTTTEE
T ss_pred cEECCcCCee
Confidence 9999999853
No 60
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=35.11 E-value=12 Score=29.89 Aligned_cols=54 Identities=20% Similarity=0.418 Sum_probs=34.1
Q ss_pred CcccccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCCC
Q 005036 388 CMCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGH 450 (717)
Q Consensus 388 CsC~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCgk 450 (717)
-.|.||..-+.. +.-.-|.||.|..+-|+.|-.-.. ....+..++.++|..|-.
T Consensus 7 ~~C~vC~~~~~~-~~~~ll~Cd~C~~~~H~~C~~p~l--------~~~~~~p~~~W~C~~C~~ 60 (66)
T 2yt5_A 7 GVCTICQEEYSE-APNEMVICDKCGQGYHQLCHTPHI--------DSSVIDSDEKWLCRQCVF 60 (66)
T ss_dssp CCBSSSCCCCCB-TTBCEEECSSSCCEEETTTSSSCC--------CHHHHHSSCCCCCHHHHH
T ss_pred CCCCCCCCCCCC-CCCCEEECCCCChHHHhhhCCCcc--------cccccCCCCCEECCCCcC
Confidence 356777764322 345789999999999999953211 000012456899998843
No 61
>2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4
Probab=34.89 E-value=2.5e+02 Score=27.31 Aligned_cols=54 Identities=13% Similarity=0.107 Sum_probs=24.9
Q ss_pred HhhhhhhhHHHHHHHHhHHHHHHHHhh----hcchH-HHHHHHHHHHHHHHHHHHhhhh
Q 005036 662 KLSKLCLRETEERRRKKLEELKVLEDS----HCDYL-KMKRMQAEIAGLLERMEATKQQ 715 (717)
Q Consensus 662 ~~~Kl~l~EaEe~r~~~~Eelk~~E~s----~~d~~-~mkrM~~~I~~LL~~MEatK~~ 715 (717)
+++..+++=++.-+..+.+.|+.+-.. +-.+. .+.+++.++++....++.+|+.
T Consensus 80 ~~a~~h~~~a~~L~~~v~~~l~~~~~~~~~~rK~~~~~~~k~~k~~~~~~~~l~KaKk~ 138 (301)
T 2efk_A 80 DFAGQRELVAENLSVRVCLELTKYSQEMKQERKMHFQEGRRAQQQLENGFKQLENSKRK 138 (301)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444445555555433211 11111 1224566666666666666543
No 62
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=34.63 E-value=16 Score=29.19 Aligned_cols=20 Identities=20% Similarity=0.456 Sum_probs=16.9
Q ss_pred ceEecCCcchHHhHHhhhhc
Q 005036 404 SWVGCDVCSHWCHAACGIQR 423 (717)
Q Consensus 404 ~WIgCd~CgHwcHldCALr~ 423 (717)
..+.|..|+..+|-.|+-+-
T Consensus 36 qg~~C~~C~~~~Hk~C~~~v 55 (65)
T 3uej_A 36 QGLKCEDCGMNVHHKCREKV 55 (65)
T ss_dssp CEEEETTTCCEECHHHHTTS
T ss_pred eeeECCCCCCeEchhHhhhC
Confidence 45789999999999998653
No 63
>3v6i_A V-type ATP synthase subunit E; peripheral stator stalk, right handed coiled-coil, ATPase/SY ATP binding, membrane, hydrolase; 2.25A {Thermus thermophilus} PDB: 3k5b_E 3j0j_J
Probab=34.36 E-value=2.4e+02 Score=26.46 Aligned_cols=16 Identities=19% Similarity=0.073 Sum_probs=7.4
Q ss_pred HHHHHHHhhhHHHHhh
Q 005036 636 EARREADEYKRMVCAR 651 (717)
Q Consensus 636 eARrEAE~lqrI~~aK 651 (717)
+|+.||+.+..-++.|
T Consensus 32 eA~~eA~~~~~~~~~~ 47 (187)
T 3v6i_A 32 EAEEKAKALLQARERA 47 (187)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4444554444444444
No 64
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=33.64 E-value=10 Score=28.11 Aligned_cols=34 Identities=24% Similarity=0.502 Sum_probs=21.8
Q ss_pred ccccccc-ccCCCCccceEecCCcchHHhHHhhhhcCc
Q 005036 389 MCPVCLN-FDCANNTCSWVGCDVCSHWCHAACGIQRNL 425 (717)
Q Consensus 389 sC~IC~K-FD~nkdtc~WIgCd~CgHwcHldCALr~~~ 425 (717)
.|.||.. |..+.+... .--|||.-|.+|..+-..
T Consensus 7 ~C~IC~~~~~~~~~~~~---~~~CgH~fc~~Ci~~~~~ 41 (55)
T 2ecm_A 7 GCPICLEDIHTSRVVAH---VLPCGHLLHRTCYEEMLK 41 (55)
T ss_dssp SCTTTCCCCCTTTSCEE---ECTTSCEEETTHHHHHHH
T ss_pred cCcccChhhcCCCcCeE---ecCCCCcccHHHHHHHHH
Confidence 4778865 343333333 335899999999876543
No 65
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=32.89 E-value=21 Score=28.70 Aligned_cols=46 Identities=17% Similarity=0.157 Sum_probs=40.9
Q ss_pred ccccCCCCchhhhHHHHhhHHHHHHHHhhHHHHHHHHHhhhHHHHh
Q 005036 605 GKLSKNDGFDSLESVVRIKEAEARMFQNKADEARREADEYKRMVCA 650 (717)
Q Consensus 605 ~~~~Kk~~~eeLEsIVRlKqAEA~MFQ~kAdeARrEAE~lqrI~~a 650 (717)
.|++|+..+++||.=|.-=..|-.-.+.....-+.|...|+.+++|
T Consensus 16 ~R~rKk~~~~~Le~~~~~L~~~n~~L~~~i~~L~~e~~~Lk~~lla 61 (61)
T 1t2k_D 16 SRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQLLLA 61 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3678899999999999988888888899999999999999998876
No 66
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=32.67 E-value=17 Score=30.30 Aligned_cols=38 Identities=24% Similarity=0.270 Sum_probs=25.9
Q ss_pred CCCCCCCCcccccccccCCCCccceEecCCcchHHhHHhhhhcC
Q 005036 381 NKGFCSSCMCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRN 424 (717)
Q Consensus 381 ~~GFCr~CsC~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~ 424 (717)
.|.||..|.-.|=.- .--++.|..|+..||-.|+-+-.
T Consensus 33 ~pt~C~~C~~~lwGl------~kqG~~C~~C~~~~Hk~C~~~v~ 70 (77)
T 2enn_A 33 QPTFCSVCHEFVWGL------NKQGYQCRQCNAAIHKKCIDKVI 70 (77)
T ss_dssp SCEECSSSCCEECCT------TCCEEECSSSCCEEESGGGSSCC
T ss_pred CCcCccccChhhccc------cccccCcCCCCCcCCHhHHhhCc
Confidence 466776665444321 12568999999999999986543
No 67
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=30.50 E-value=15 Score=29.43 Aligned_cols=36 Identities=22% Similarity=0.472 Sum_probs=24.5
Q ss_pred CCCCCCCCcccccccccCCCCccceEecCCcchHHhHHhhhh
Q 005036 381 NKGFCSSCMCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQ 422 (717)
Q Consensus 381 ~~GFCr~CsC~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr 422 (717)
.|.||.-|.-.|=.- .--.+.|..|+..||-.|+-+
T Consensus 22 ~pt~C~~C~~~l~Gl------~~qg~~C~~C~~~~Hk~C~~~ 57 (65)
T 2enz_A 22 SPTFCEHCGTLLWGL------ARQGLKCDACGMNVHHRCQTK 57 (65)
T ss_dssp SCCBCSSSCCBCCCS------SSCSEEESSSCCEECTTTTTT
T ss_pred CCcCchhcChhheec------CCcccccCCCCCccCHhHHhh
Confidence 456777665554211 114578999999999999755
No 68
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=29.95 E-value=16 Score=29.40 Aligned_cols=36 Identities=19% Similarity=0.426 Sum_probs=25.2
Q ss_pred CCCCCCCCcccccccccCCCCccceEecCCcchHHhHHhhhh
Q 005036 381 NKGFCSSCMCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQ 422 (717)
Q Consensus 381 ~~GFCr~CsC~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr 422 (717)
.|.||..|.-.|=.- .--++.|..|+..||-.|+-+
T Consensus 23 ~pt~C~~C~~~l~Gl------~~qg~~C~~C~~~~Hk~C~~~ 58 (66)
T 1y8f_A 23 TPTYCYECEGLLWGI------ARQGMRCTECGVKCHEKCQDL 58 (66)
T ss_dssp SCCCCTTTCCCCCSS------CCEEEEETTTCCEECTTHHHH
T ss_pred CCcChhhcChhhccc------CcceeEcCCCCCeeCHHHHhh
Confidence 467777665555211 125689999999999999865
No 69
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.44 E-value=23 Score=29.76 Aligned_cols=44 Identities=23% Similarity=0.218 Sum_probs=28.3
Q ss_pred CCCCCCCCcccccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCC
Q 005036 381 NKGFCSSCMCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGP 430 (717)
Q Consensus 381 ~~GFCr~CsC~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~ 430 (717)
.|.||.-|.-.|=. . .--++.|..|+..||-.|+-+-...+.+.
T Consensus 27 ~pt~C~~C~~~lwG---l---~kqg~~C~~C~~~~Hk~C~~~v~~~C~~~ 70 (83)
T 2yuu_A 27 QPTFCSVCKDFVWG---L---NKQGYKCRQCNAAIHKKCIDKIIGRCTGT 70 (83)
T ss_dssp SCCCCSSSCCCCCS---S---SCCEEEETTTCCEECTTGGGTCCSCCSSC
T ss_pred CCcChhhcChhhcc---c---cccccccCCcCCeeChhhhhhCCCcCCCc
Confidence 45677666444421 1 12568899999999999987754433333
No 70
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=28.74 E-value=14 Score=30.02 Aligned_cols=36 Identities=25% Similarity=0.550 Sum_probs=25.5
Q ss_pred ceEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCCC
Q 005036 404 SWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGH 450 (717)
Q Consensus 404 ~WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCgk 450 (717)
..|.||.|..|-|+.|--- .+. ...++.++|..|-.
T Consensus 19 ~ll~CD~C~~~fH~~Cl~p--------pl~---~~P~g~W~C~~C~~ 54 (66)
T 1xwh_A 19 ELICCDGCPRAFHLACLSP--------PLR---EIPSGTWRCSSCLQ 54 (66)
T ss_dssp SCEECSSCCCEECTTTSSS--------CCS---SCCSSCCCCHHHHH
T ss_pred CEEEcCCCChhhcccccCC--------CcC---cCCCCCeECccccC
Confidence 5899999999999999531 111 12346899998853
No 71
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=28.08 E-value=19 Score=30.90 Aligned_cols=54 Identities=22% Similarity=0.576 Sum_probs=34.3
Q ss_pred CcccccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCCCCCC-CCCCccceEEeccCCC
Q 005036 388 CMCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKG-PSGTSEMQFHCIGCGH 450 (717)
Q Consensus 388 CsC~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG-~s~~lDm~F~C~aCgk 450 (717)
..|.||.+.+.. +.-.-|.||.|...-|+.|-- +.+.- .....++.++|..|-.
T Consensus 17 ~~C~vC~~~~~~-~~~~ll~CD~C~~~yH~~Cl~--------Ppl~~~~~~~p~g~W~C~~C~~ 71 (88)
T 1wev_A 17 LACVVCRQMTVA-SGNQLVECQECHNLYHQDCHK--------PQVTDKEVNDPRLVWYCARCTR 71 (88)
T ss_dssp CSCSSSCCCCCC-TTCCEEECSSSCCEEETTTSS--------SCCCHHHHHCTTCCCCCHHHHH
T ss_pred CcCCCCCCCCCC-CCCceEECCCCCCeEcCccCC--------CcccccccCCCCCCeeCccccc
Confidence 457788876542 223489999999999999942 21000 0012467899999854
No 72
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=27.84 E-value=28 Score=31.15 Aligned_cols=40 Identities=18% Similarity=0.231 Sum_probs=24.5
Q ss_pred CCCCCCcccccccccCCCCccceEecCCcchHHhHH--hhhhc
Q 005036 383 GFCSSCMCPVCLNFDCANNTCSWVGCDVCSHWCHAA--CGIQR 423 (717)
Q Consensus 383 GFCr~CsC~IC~KFD~nkdtc~WIgCd~CgHwcHld--CALr~ 423 (717)
.||..|.=.+=-+-|.. +..+-+.|..|++.-.++ |..+.
T Consensus 5 ~FCp~Cgn~L~~~~~~~-~~~~~~~C~~C~y~~~~~~~~v~~~ 46 (113)
T 3h0g_I 5 QYCIECNNMLYPREDKV-DRVLRLACRNCDYSEIAATSKVYRH 46 (113)
T ss_dssp CCCSSSCCCCEECCCTT-TCCCCEECSSSCCEECCSCSEEEEC
T ss_pred eeCcCCCCEeeEcccCC-CCeeEEECCCCCCeEEcCCCeEEEE
Confidence 47777766665554433 234455699999877665 55543
No 73
>2au3_A DNA primase; zinc ribbon, toprim, RNA polymerase, DNA replication, transf; HET: DNA; 2.00A {Aquifex aeolicus}
Probab=27.78 E-value=37 Score=35.95 Aligned_cols=22 Identities=32% Similarity=0.670 Sum_probs=19.7
Q ss_pred ceEEeccCCCccchhhhHHHHH
Q 005036 441 MQFHCIGCGHASEMFGFVKDVF 462 (717)
Q Consensus 441 m~F~C~aCgk~SeLlG~VKkvf 462 (717)
+.|||-+||..-|.+.||.++-
T Consensus 54 ~~~~CFgCg~gGd~i~fv~~~~ 75 (407)
T 2au3_A 54 QIFKCFGCGVGGDAIKFVSLYE 75 (407)
T ss_dssp TEEEETTTCCEECHHHHHHHHH
T ss_pred CEEEECCCCCCCCHHHHHHHHh
Confidence 4799999999999999999874
No 74
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4
Probab=27.45 E-value=4.1e+02 Score=25.72 Aligned_cols=23 Identities=4% Similarity=0.164 Sum_probs=11.5
Q ss_pred HHHHhhHHHHHHHHHhhhHHHHh
Q 005036 628 RMFQNKADEARREADEYKRMVCA 650 (717)
Q Consensus 628 ~MFQ~kAdeARrEAE~lqrI~~a 650 (717)
+.|+.||.==+.=|.+|++|+..
T Consensus 35 ~f~~eRa~iE~eYak~L~kLa~~ 57 (305)
T 2efl_A 35 KFVKERTEIELSYAKQLRNLSKK 57 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555554444445555555544
No 75
>2k6i_A Uncharacterized protein MJ0223; H subunit, A1AO ATP synthase, V1VO ATPase, F1FO ATP synthase, structural protein; NMR {Methanocaldococcus jannaschii}
Probab=27.15 E-value=30 Score=28.45 Aligned_cols=38 Identities=26% Similarity=0.385 Sum_probs=25.5
Q ss_pred hHHHHhhHHHHHHHHhhHHHHHHHHHhhhHHHHhhhhhh
Q 005036 617 ESVVRIKEAEARMFQNKADEARREADEYKRMVCARTEKL 655 (717)
Q Consensus 617 EsIVRlKqAEA~MFQ~kAdeARrEAE~lqrI~~aK~eK~ 655 (717)
|-|-+||.||.+- -...++|..||+.+..-|+++..+|
T Consensus 16 EvL~eIKeAE~~A-~~iVeeA~~ea~~ii~eAreeAkeI 53 (56)
T 2k6i_A 16 EAIKEVKLAEEQA-VKEIEEAKNRAEQIKAEAIEEAKKL 53 (56)
T ss_dssp TTSCTTCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455678888653 3456778888887777777666655
No 76
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=27.15 E-value=36 Score=29.32 Aligned_cols=38 Identities=26% Similarity=0.574 Sum_probs=26.1
Q ss_pred cccccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCC
Q 005036 389 MCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGP 430 (717)
Q Consensus 389 sC~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~ 430 (717)
.|-+|.+.- +++ .-.|+.|...-|+.||+....-+-|+
T Consensus 49 ~C~~C~~~~---~~~-~Y~C~~C~f~lH~~Ca~~p~~~~~~~ 86 (89)
T 1v5n_A 49 TCDKCEEEG---TIW-SYHCDECDFDLHAKCALNEDTKESGP 86 (89)
T ss_dssp CCTTTSCCC---CSC-EEECTTTCCCCCHHHHHCSSCSSCCC
T ss_pred EeCCCCCcC---CCc-EEEcCCCCCeEcHHhcCCCCccccCC
Confidence 566676541 222 25799999999999999877644444
No 77
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.99 E-value=25 Score=29.78 Aligned_cols=39 Identities=23% Similarity=0.421 Sum_probs=27.0
Q ss_pred CCCCCCCCcccccccccCCCCccceEecCCcchHHhHHhhhhcCc
Q 005036 381 NKGFCSSCMCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNL 425 (717)
Q Consensus 381 ~~GFCr~CsC~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~ 425 (717)
.|.||..|.-.|=.- .--++.|..|+..||-.|+-+-..
T Consensus 27 ~pt~C~~C~~~l~Gl------~kqG~~C~~C~~~~Hk~C~~~v~~ 65 (85)
T 2eli_A 27 SPTFCDHCGSLLYGL------IHQGMKCDTCDMNVHKQCVINVPS 65 (85)
T ss_dssp SCCBCSSSCCBCCCS------SSCEEECSSSCCEEETTTTTTSCS
T ss_pred CCcCCcccCcccccc------ccCCCcCCCcCCccCHhHHhhcCC
Confidence 467777665555221 125688999999999999876543
No 78
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=26.58 E-value=23 Score=28.63 Aligned_cols=46 Identities=20% Similarity=0.245 Sum_probs=37.2
Q ss_pred ccccCCCCchhhhHHHHhhHHHHHHHHhhHHHHHHHHHhhhHHHHh
Q 005036 605 GKLSKNDGFDSLESVVRIKEAEARMFQNKADEARREADEYKRMVCA 650 (717)
Q Consensus 605 ~~~~Kk~~~eeLEsIVRlKqAEA~MFQ~kAdeARrEAE~lqrI~~a 650 (717)
.|.+|++.+++||.=|.--++|-.-.+..++.-+.|...|+.++++
T Consensus 16 ~R~rKk~~~~~Le~~v~~L~~~n~~L~~~v~~L~~e~~~Lk~~l~~ 61 (62)
T 1jnm_A 16 SRKRKLERIARLEEKVKTLKAQNSELASTANMLREQVAQLKQKVMN 61 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4678899999999999999999999999999999999999888764
No 79
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.86 E-value=14 Score=28.30 Aligned_cols=36 Identities=17% Similarity=0.461 Sum_probs=22.3
Q ss_pred ccccccc-ccCCCCccceEecCCcchHHhHHhhhhcC
Q 005036 389 MCPVCLN-FDCANNTCSWVGCDVCSHWCHAACGIQRN 424 (717)
Q Consensus 389 sC~IC~K-FD~nkdtc~WIgCd~CgHwcHldCALr~~ 424 (717)
.|.||.. |.....+-..+.--.|||.-|.+|..+-.
T Consensus 17 ~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~ 53 (69)
T 2ea6_A 17 SCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSL 53 (69)
T ss_dssp CCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHH
T ss_pred CCcccCccccccccccCCeEeCCCCChhcHHHHHHHH
Confidence 4677765 33322222333445899999999987654
No 80
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=25.16 E-value=1.4e+02 Score=31.41 Aligned_cols=9 Identities=33% Similarity=0.412 Sum_probs=5.2
Q ss_pred Ccccccccc
Q 005036 52 PKLETLNLS 60 (717)
Q Consensus 52 ~~le~l~Ls 60 (717)
|.|..|||+
T Consensus 34 ~~L~~L~Ls 42 (487)
T 3oja_A 34 WNVKELDLS 42 (487)
T ss_dssp GGCCEEECC
T ss_pred CCccEEEee
Confidence 356666665
No 81
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.02 E-value=25 Score=29.08 Aligned_cols=44 Identities=25% Similarity=0.498 Sum_probs=28.0
Q ss_pred CCCCCCCCcccccccccCCCCccceEecCCcchHHhHHhhhhcCc-ccCCC
Q 005036 381 NKGFCSSCMCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNL-IKPGP 430 (717)
Q Consensus 381 ~~GFCr~CsC~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~-i~~G~ 430 (717)
.+.||..|.=.|=.- .--.+.|..|+..||-.|+-+-.. -++|+
T Consensus 27 ~pt~C~~C~~~lwGl------~kqG~~C~~C~~~~Hk~C~~~v~~~~C~~~ 71 (74)
T 2db6_A 27 KPKFCDVCARMIVLN------NKFGLRCKNCKTNIHEHCQSYVEMQRCSGP 71 (74)
T ss_dssp SCEECSSSCCEECHH------HHEEEEESSSCCEECTTTTGGGSSSBCCCC
T ss_pred CCcCchhcChhhccc------cCCccccCCCCCccChhHHhhCCCCcCCCC
Confidence 455666554433211 124589999999999999877653 24554
No 82
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=24.22 E-value=20 Score=34.47 Aligned_cols=48 Identities=21% Similarity=0.549 Sum_probs=32.0
Q ss_pred cccccccccCCCCccceEecCCcchHHhHHhhhhcCcccCCCCCCCCCCCccceEEeccCCCccc
Q 005036 389 MCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGHASE 453 (717)
Q Consensus 389 sC~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~i~~G~~~kG~s~~lDm~F~C~aCgk~Se 453 (717)
.|.+|++-+ ..|-||.|-.+-|+.|-.- +.. ...++.++|..|-....
T Consensus 4 ~C~~C~~~g------~ll~Cd~C~~~~H~~Cl~p------~l~-----~~p~g~W~C~~C~~~~~ 51 (189)
T 2ro1_A 4 ICRVCQKPG------DLVMCNQCEFCFHLDCHLP------ALQ-----DVPGEEWSCSLCHVLPD 51 (189)
T ss_dssp CBTTTCCCS------SCCCCTTTCCBCCSTTSTT------CCS-----SCCCTTCCTTTTSCSCC
T ss_pred cCccCCCCC------ceeECCCCCchhccccCCC------Ccc-----cCCCCCCCCcCccCCCC
Confidence 356666432 3788999999999999632 111 12245789999976643
No 83
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=23.90 E-value=23 Score=27.51 Aligned_cols=32 Identities=28% Similarity=0.547 Sum_probs=20.0
Q ss_pred ccccccc-ccCCCCccceEecCCcchHHhHHhhhhcC
Q 005036 389 MCPVCLN-FDCANNTCSWVGCDVCSHWCHAACGIQRN 424 (717)
Q Consensus 389 sC~IC~K-FD~nkdtc~WIgCd~CgHwcHldCALr~~ 424 (717)
.|.||.. |+.... +..--|||.-|.+|..+-.
T Consensus 16 ~C~IC~~~~~~~~~----~~~~~C~H~fc~~Ci~~~~ 48 (69)
T 2kiz_A 16 KCTICLSILEEGED----VRRLPCMHLFHQVCVDQWL 48 (69)
T ss_dssp SBTTTTBCCCSSSC----EEECTTSCEEEHHHHHHHH
T ss_pred CCeeCCccccCCCc----EEEeCCCCHHHHHHHHHHH
Confidence 4677755 332222 2223599999999987654
No 84
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.60 E-value=28 Score=27.43 Aligned_cols=33 Identities=30% Similarity=0.533 Sum_probs=20.1
Q ss_pred cccccccccCCCCccceEecCCcchHHhHHhhhhcC
Q 005036 389 MCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRN 424 (717)
Q Consensus 389 sC~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~ 424 (717)
.|.||...-.+... .... -|||.-|.+|..+-.
T Consensus 17 ~C~IC~~~~~~~~~--~~~~-~C~H~f~~~Ci~~~~ 49 (74)
T 2ep4_A 17 LCAVCLEDFKPRDE--LGIC-PCKHAFHRKCLIKWL 49 (74)
T ss_dssp BCSSSCCBCCSSSC--EEEE-TTTEEEEHHHHHHHH
T ss_pred CCcCCCcccCCCCc--EEEc-CCCCEecHHHHHHHH
Confidence 46777654222222 2222 499999999987654
No 85
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.25 E-value=30 Score=29.06 Aligned_cols=31 Identities=19% Similarity=0.486 Sum_probs=22.1
Q ss_pred ccccccccCCCCccceEecCCcchHHhHHhhhhcCc
Q 005036 390 CPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRNL 425 (717)
Q Consensus 390 C~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~~ 425 (717)
|.||+..-. ..+.|..|+|.-|..|.-+-..
T Consensus 18 C~IC~~~i~-----~g~~C~~C~h~fH~~Ci~kWl~ 48 (74)
T 2ct0_A 18 CNICHSLLI-----QGQSCETCGIRMHLPCVAKYFQ 48 (74)
T ss_dssp CSSSCCBCS-----SSEECSSSCCEECHHHHHHHST
T ss_pred CcchhhHcc-----cCCccCCCCchhhHHHHHHHHH
Confidence 556655422 1468889999999999986653
No 86
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=22.14 E-value=31 Score=37.06 Aligned_cols=18 Identities=28% Similarity=0.527 Sum_probs=15.7
Q ss_pred ceEecCCcchHHhHHhhh
Q 005036 404 SWVGCDVCSHWCHAACGI 421 (717)
Q Consensus 404 ~WIgCd~CgHwcHldCAL 421 (717)
..+.|..|+..||-.|+-
T Consensus 236 qg~~C~~C~~~~Hk~C~~ 253 (463)
T 3cxl_A 236 QGVKCADCGLNVHKQCSK 253 (463)
T ss_dssp CEEEETTTCCEECHHHHT
T ss_pred cCeeccccCccccccccc
Confidence 357999999999999973
No 87
>2jwo_A RAG-2, V(D)J recombination-activating protein 2; phosphoinositide signaling, PHD domain, DNA recombination, DNA-binding, endonuclease, hydrolase; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 2v83_A* 2v85_A* 2v86_A* 2v87_A* 2v88_A* 2v89_A*
Probab=20.98 E-value=15 Score=32.05 Aligned_cols=8 Identities=63% Similarity=1.676 Sum_probs=7.7
Q ss_pred chHHhHHh
Q 005036 412 SHWCHAAC 419 (717)
Q Consensus 412 gHwcHldC 419 (717)
|||+|..|
T Consensus 46 ghwvhaqc 53 (82)
T 2jwo_A 46 GHWVHAQC 53 (82)
T ss_dssp CCEECSGG
T ss_pred chHHHHHH
Confidence 99999999
No 88
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.23 E-value=20 Score=28.48 Aligned_cols=33 Identities=24% Similarity=0.360 Sum_probs=20.1
Q ss_pred cccccccccCCCCccceEecCCcchHHhHHhhhhcC
Q 005036 389 MCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIQRN 424 (717)
Q Consensus 389 sC~IC~KFD~nkdtc~WIgCd~CgHwcHldCALr~~ 424 (717)
.|.||...-.+.+....+ -|||.-|.+|..+-.
T Consensus 25 ~C~IC~~~~~~~~~~~~l---~C~H~fh~~Ci~~w~ 57 (75)
T 1x4j_A 25 LCVVCMCDFESRQLLRVL---PCNHEFHAKCVDKWL 57 (75)
T ss_dssp EETTTTEECCBTCEEEEE---TTTEEEETTHHHHHH
T ss_pred CCeECCcccCCCCeEEEE---CCCCHhHHHHHHHHH
Confidence 466776532222222333 499999999987654
No 89
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=20.08 E-value=42 Score=29.63 Aligned_cols=32 Identities=22% Similarity=0.608 Sum_probs=23.9
Q ss_pred ccccccccc-CC--CCccceEecCCcchHHhHHhh
Q 005036 389 MCPVCLNFD-CA--NNTCSWVGCDVCSHWCHAACG 420 (717)
Q Consensus 389 sC~IC~KFD-~n--kdtc~WIgCd~CgHwcHldCA 420 (717)
.|-+|.+.+ .| .++-..|.|+.|+.+-|+.|.
T Consensus 7 ~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl 41 (112)
T 3v43_A 7 ICSFCLGTKEQNREKKPEELISCADCGNSGHPSCL 41 (112)
T ss_dssp SBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHH
T ss_pred cccccCCchhhCcCCCchhceEhhhcCCCCCCchh
Confidence 366776653 33 244579999999999999996
Done!