Query 005037
Match_columns 717
No_of_seqs 414 out of 2013
Neff 6.7
Searched_HMMs 46136
Date Thu Mar 28 17:01:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005037.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005037hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02893 Cellulose synthase-li 100.0 8E-177 2E-181 1497.6 63.4 703 3-715 8-729 (734)
2 PLN02436 cellulose synthase A 100.0 7E-176 2E-180 1511.9 55.7 695 4-716 268-1073(1094)
3 PLN02400 cellulose synthase 100.0 1E-175 3E-180 1516.6 52.5 695 4-715 259-1062(1085)
4 PLN02638 cellulose synthase A 100.0 2E-175 5E-180 1513.8 52.8 695 4-715 252-1057(1079)
5 PLN02189 cellulose synthase 100.0 4E-175 9E-180 1507.6 54.6 694 4-715 234-1018(1040)
6 PLN02195 cellulose synthase A 100.0 3E-174 6E-179 1494.0 57.0 694 4-715 155-953 (977)
7 PLN02915 cellulose synthase A 100.0 8E-173 2E-177 1489.1 55.8 697 3-715 189-1022(1044)
8 PLN02190 cellulose synthase-li 100.0 2E-172 4E-177 1453.5 52.9 686 4-716 6-756 (756)
9 PLN02248 cellulose synthase-li 100.0 4E-171 9E-176 1476.0 55.8 697 4-714 265-1115(1135)
10 PF03552 Cellulose_synt: Cellu 100.0 6E-158 1E-162 1332.3 34.2 605 101-716 1-705 (720)
11 PRK11498 bcsA cellulose syntha 100.0 1.7E-69 3.7E-74 635.8 54.2 489 21-694 185-683 (852)
12 TIGR03030 CelA cellulose synth 100.0 3.4E-69 7.3E-74 635.7 55.3 506 21-696 56-572 (713)
13 PRK05454 glucosyltransferase M 100.0 1.8E-37 3.8E-42 361.2 54.8 363 20-525 40-420 (691)
14 cd04191 Glucan_BSP_ModH Glucan 100.0 9.7E-37 2.1E-41 318.5 25.4 242 101-478 1-253 (254)
15 PRK14583 hmsR N-glycosyltransf 100.0 1.1E-34 2.4E-39 326.4 42.5 231 96-483 72-307 (444)
16 COG1215 Glycosyltransferases, 100.0 4.1E-35 8.8E-40 327.4 30.3 233 98-482 53-290 (439)
17 PRK11204 N-glycosyltransferase 100.0 1.2E-33 2.6E-38 315.3 39.4 230 96-483 51-286 (420)
18 TIGR03111 glyc2_xrt_Gpos1 puta 100.0 4E-33 8.6E-38 313.3 38.6 281 96-533 46-341 (439)
19 PRK14716 bacteriophage N4 adso 100.0 3E-31 6.6E-36 299.6 38.3 269 95-507 62-355 (504)
20 cd06437 CESA_CaSu_A2 Cellulose 100.0 6.5E-31 1.4E-35 269.1 22.5 227 99-476 1-232 (232)
21 PRK11234 nfrB bacteriophage N4 100.0 9.5E-30 2.1E-34 298.0 35.2 240 95-481 59-334 (727)
22 cd06421 CESA_CelA_like CESA_Ce 100.0 1.2E-30 2.7E-35 265.5 23.5 229 99-479 1-233 (234)
23 cd06427 CESA_like_2 CESA_like_ 100.0 4.1E-30 8.8E-35 265.4 24.9 232 99-482 1-236 (241)
24 cd06435 CESA_NdvC_like NdvC_li 100.0 6.8E-29 1.5E-33 254.1 24.0 229 102-482 1-234 (236)
25 PF13641 Glyco_tranf_2_3: Glyc 100.0 4.4E-29 9.5E-34 253.9 6.0 224 99-475 1-228 (228)
26 TIGR03472 HpnI hopanoid biosyn 100.0 1.6E-26 3.5E-31 254.6 26.3 231 96-477 38-273 (373)
27 cd04190 Chitin_synth_C C-termi 99.9 2.6E-27 5.7E-32 245.8 14.8 172 269-478 64-243 (244)
28 PRK15489 nfrB bacteriophage N4 99.9 6.1E-25 1.3E-29 254.8 33.7 239 95-480 67-341 (703)
29 cd04192 GT_2_like_e Subfamily 99.9 1.8E-25 3.9E-30 226.1 21.6 224 103-475 1-229 (229)
30 cd02520 Glucosylceramide_synth 99.9 7.5E-26 1.6E-30 226.3 18.3 195 99-475 1-195 (196)
31 cd06434 GT2_HAS Hyaluronan syn 99.9 1.5E-24 3.2E-29 221.5 20.2 228 100-477 1-233 (235)
32 TIGR03469 HonB hopene-associat 99.9 4.6E-23 9.9E-28 228.1 30.6 238 95-473 36-279 (384)
33 cd06439 CESA_like_1 CESA_like_ 99.9 2.2E-23 4.8E-28 215.4 22.5 224 95-478 25-250 (251)
34 cd02525 Succinoglycan_BP_ExoA 99.9 2.1E-21 4.6E-26 198.9 21.9 226 100-482 1-233 (249)
35 COG2943 MdoH Membrane glycosyl 99.9 8.4E-18 1.8E-22 182.7 44.0 283 99-522 144-436 (736)
36 cd06436 GlcNAc-1-P_transferase 99.8 2E-20 4.3E-25 186.8 16.9 166 103-372 1-177 (191)
37 cd06438 EpsO_like EpsO protein 99.8 2.9E-20 6.2E-25 183.8 14.8 163 103-372 1-169 (183)
38 cd04184 GT2_RfbC_Mx_like Myxoc 99.8 3.1E-18 6.7E-23 170.5 17.5 194 99-449 1-195 (202)
39 PF13632 Glyco_trans_2_3: Glyc 99.8 9.5E-18 2.1E-22 166.9 16.7 137 285-476 1-143 (193)
40 cd04195 GT2_AmsE_like GT2_AmsE 99.8 1.4E-17 3E-22 165.9 17.3 190 102-449 1-195 (201)
41 cd02510 pp-GalNAc-T pp-GalNAc- 99.8 3.6E-17 7.8E-22 174.6 19.3 202 102-450 1-220 (299)
42 cd06433 GT_2_WfgS_like WfgS an 99.7 1.2E-16 2.7E-21 157.4 16.5 187 102-449 1-188 (202)
43 PLN02726 dolichyl-phosphate be 99.7 6.1E-16 1.3E-20 160.1 21.0 205 96-449 6-212 (243)
44 cd06913 beta3GnTL1_like Beta 1 99.7 1.1E-15 2.3E-20 155.2 20.1 203 103-450 1-204 (219)
45 cd04196 GT_2_like_d Subfamily 99.7 4.2E-16 9.1E-21 156.0 15.7 194 102-449 1-197 (214)
46 cd02522 GT_2_like_a GT_2_like_ 99.7 2.1E-15 4.6E-20 152.2 18.8 178 101-446 1-178 (221)
47 cd06420 GT2_Chondriotin_Pol_N 99.7 2.4E-15 5.2E-20 147.2 17.8 174 103-449 1-174 (182)
48 cd04186 GT_2_like_c Subfamily 99.7 2.2E-15 4.8E-20 143.9 16.6 159 103-449 1-159 (166)
49 cd04185 GT_2_like_b Subfamily 99.7 3E-15 6.4E-20 149.6 17.5 168 103-450 1-168 (202)
50 cd06442 DPM1_like DPM1_like re 99.7 3.5E-15 7.6E-20 150.9 18.1 195 103-449 1-197 (224)
51 PRK10073 putative glycosyl tra 99.6 2.4E-15 5.1E-20 163.3 16.0 199 98-450 5-211 (328)
52 PF03142 Chitin_synth_2: Chiti 99.6 3.8E-13 8.2E-18 152.1 31.9 166 281-481 200-379 (527)
53 PF13506 Glyco_transf_21: Glyc 99.6 1.3E-14 2.7E-19 143.8 14.9 156 263-474 15-175 (175)
54 cd06423 CESA_like CESA_like is 99.6 7.6E-15 1.7E-19 139.6 11.2 162 103-372 1-168 (180)
55 PRK10063 putative glycosyl tra 99.6 1.2E-13 2.7E-18 144.1 19.3 190 99-450 1-191 (248)
56 cd04188 DPG_synthase DPG_synth 99.6 6.9E-14 1.5E-18 141.1 16.9 195 103-448 1-201 (211)
57 PF00535 Glycos_transf_2: Glyc 99.6 6.6E-15 1.4E-19 139.9 8.9 165 102-372 1-167 (169)
58 cd02526 GT2_RfbF_like RfbF is 99.6 2.4E-14 5.1E-19 146.3 13.6 145 250-449 49-198 (237)
59 PRK10018 putative glycosyl tra 99.5 2.4E-13 5.1E-18 144.4 19.9 110 97-310 3-112 (279)
60 cd04179 DPM_DPG-synthase_like 99.5 1.4E-13 3.1E-18 134.8 13.1 164 103-372 1-165 (185)
61 PTZ00260 dolichyl-phosphate be 99.5 5.1E-12 1.1E-16 137.6 24.8 129 96-323 67-201 (333)
62 PF10111 Glyco_tranf_2_2: Glyc 99.5 1E-12 2.2E-17 139.7 18.4 134 264-449 74-216 (281)
63 cd04187 DPM1_like_bac Bacteria 99.5 1.4E-12 3E-17 128.1 15.5 104 250-372 57-161 (181)
64 TIGR01556 rhamnosyltran L-rham 99.4 2.3E-12 5E-17 136.2 14.9 147 249-450 46-196 (281)
65 PRK13915 putative glucosyl-3-p 99.3 2.7E-11 5.8E-16 130.4 17.8 123 96-322 28-152 (306)
66 COG1216 Predicted glycosyltran 99.3 1.5E-11 3.2E-16 132.2 14.8 208 98-458 2-222 (305)
67 PRK10714 undecaprenyl phosphat 99.3 3.1E-10 6.8E-15 123.2 23.1 43 263-310 75-117 (325)
68 cd00761 Glyco_tranf_GTA_type G 99.3 1.4E-10 3.1E-15 107.4 15.3 155 103-445 1-155 (156)
69 KOG2571 Chitin synthase/hyalur 99.2 4.5E-10 9.8E-15 131.5 20.7 168 263-475 423-596 (862)
70 cd02511 Beta4Glucosyltransfera 98.9 7.6E-09 1.6E-13 106.3 12.4 44 263-311 56-99 (229)
71 COG0463 WcaA Glycosyltransfera 98.9 9.8E-09 2.1E-13 98.0 11.8 48 98-151 2-49 (291)
72 KOG2547 Ceramide glucosyltrans 98.7 2.5E-07 5.5E-12 98.6 14.1 228 95-474 81-314 (431)
73 KOG2978 Dolichol-phosphate man 98.6 1.1E-06 2.5E-11 85.7 16.0 105 249-372 64-175 (238)
74 KOG2977 Glycosyltransferase [G 98.3 3.6E-06 7.8E-11 87.3 9.9 114 100-309 68-186 (323)
75 cd02514 GT13_GLCNAC-TI GT13_GL 98.1 4.4E-05 9.5E-10 83.0 14.3 45 101-149 2-46 (334)
76 KOG3737 Predicted polypeptide 97.6 0.0001 2.2E-09 79.3 7.1 50 94-146 150-199 (603)
77 KOG3736 Polypeptide N-acetylga 97.3 0.0002 4.3E-09 82.4 4.0 219 95-462 138-378 (578)
78 KOG3738 Predicted polypeptide 96.9 0.0032 6.9E-08 68.3 8.7 51 95-148 120-170 (559)
79 PF13704 Glyco_tranf_2_4: Glyc 95.5 0.077 1.7E-06 46.8 8.7 35 113-152 3-37 (97)
80 PF13712 Glyco_tranf_2_5: Glyc 94.6 0.13 2.7E-06 53.0 8.3 48 265-320 41-89 (217)
81 cd00899 b4GalT Beta-4-Galactos 94.5 0.25 5.5E-06 50.7 10.0 144 263-480 47-200 (219)
82 COG4092 Predicted glycosyltran 93.9 1.2 2.6E-05 46.6 13.5 82 247-331 61-143 (346)
83 PRK14503 mannosyl-3-phosphogly 93.4 1.3 2.9E-05 48.3 13.2 106 263-376 142-265 (393)
84 PF03452 Anp1: Anp1; InterPro 93.4 0.45 9.7E-06 50.4 9.5 56 96-155 22-79 (269)
85 PF02364 Glucan_synthase: 1,3- 93.1 2.6 5.6E-05 50.9 16.3 194 255-503 263-482 (817)
86 PF03071 GNT-I: GNT-I family; 92.1 1 2.2E-05 50.8 10.8 49 96-149 90-139 (434)
87 TIGR02460 osmo_MPGsynth mannos 91.4 0.89 1.9E-05 49.3 8.8 106 263-376 141-264 (381)
88 PF09488 Osmo_MPGsynth: Mannos 88.4 1.7 3.6E-05 47.6 8.1 43 263-308 141-183 (381)
89 PF02709 Glyco_transf_7C: N-te 87.9 0.62 1.3E-05 40.0 3.7 51 356-449 17-67 (78)
90 PRK14502 bifunctional mannosyl 85.9 3.2 7E-05 49.4 9.2 44 263-309 146-189 (694)
91 PF01644 Chitin_synth_1: Chiti 81.3 14 0.00031 36.3 10.1 53 250-308 111-163 (163)
92 PF05679 CHGN: Chondroitin N-a 75.6 53 0.0012 38.2 14.5 48 250-305 316-363 (499)
93 PF13896 Glyco_transf_49: Glyc 59.5 12 0.00026 40.8 4.6 46 270-320 119-164 (317)
94 PF11316 Rhamno_transf: Putati 54.6 1.4E+02 0.0029 31.3 11.2 43 266-310 97-141 (234)
95 PF02434 Fringe: Fringe-like; 53.7 33 0.00073 36.0 6.7 28 281-309 85-112 (252)
96 PF05045 RgpF: Rhamnan synthes 51.7 2.7E+02 0.0058 32.5 14.1 74 295-372 380-460 (498)
97 cd02540 GT2_GlmU_N_bac N-termi 50.3 2.3E+02 0.0049 28.4 12.1 44 264-310 73-117 (229)
98 PF01762 Galactosyl_T: Galacto 49.7 26 0.00055 35.0 4.9 38 267-308 68-105 (195)
99 KOG4179 Lysyl hydrolase/glycos 46.5 17 0.00038 40.5 3.2 37 265-306 97-133 (568)
100 KOG0916 1,3-beta-glucan syntha 46.5 29 0.00063 44.2 5.3 204 255-513 1039-1257(1679)
101 KOG3916 UDP-Gal:glucosylcerami 40.6 1.2E+02 0.0026 33.4 8.3 34 264-297 197-230 (372)
102 TIGR03584 PseF pseudaminic aci 40.5 3.1E+02 0.0068 28.0 11.3 59 264-322 76-134 (222)
103 PLN03153 hypothetical protein; 39.3 1.6E+02 0.0034 34.4 9.4 27 281-308 209-235 (537)
104 PRK09382 ispDF bifunctional 2- 37.9 80 0.0017 35.4 6.9 41 266-310 83-123 (378)
105 KOG3588 Chondroitin synthase 1 36.8 1.1E+02 0.0025 33.9 7.4 130 266-449 300-431 (494)
106 KOG1413 N-acetylglucosaminyltr 32.6 85 0.0018 34.7 5.6 49 97-150 65-114 (411)
107 PF06306 CgtA: Beta-1,4-N-acet 32.2 1.4E+02 0.0031 32.6 7.2 52 99-169 87-138 (347)
108 TIGR02665 molyb_mobA molybdopt 30.6 1.7E+02 0.0038 28.3 7.3 42 264-310 73-115 (186)
109 KOG2287 Galactosyltransferases 29.7 2E+02 0.0042 31.9 8.2 24 281-305 186-209 (349)
110 cd04182 GT_2_like_f GT_2_like_ 26.2 1.9E+02 0.0041 27.7 6.7 44 264-310 74-118 (186)
111 TIGR01173 glmU UDP-N-acetylglu 25.5 6.9E+02 0.015 28.0 11.9 43 264-310 75-118 (451)
112 cd02503 MobA MobA catalyzes th 25.3 2.6E+02 0.0056 26.9 7.4 42 263-308 68-109 (181)
113 PF04724 Glyco_transf_17: Glyc 22.8 1.5E+02 0.0032 33.0 5.6 36 267-304 164-199 (356)
114 PF12804 NTP_transf_3: MobA-li 22.8 2.6E+02 0.0057 26.2 6.8 56 263-323 69-124 (160)
115 COG4097 Predicted ferric reduc 21.5 2.6E+02 0.0056 31.4 6.9 79 97-194 342-422 (438)
116 PRK00317 mobA molybdopterin-gu 21.1 3.2E+02 0.0068 26.8 7.2 43 264-310 74-116 (193)
117 COG4858 Uncharacterized membra 20.8 6.2E+02 0.014 25.7 8.7 60 637-698 101-160 (226)
118 PRK02726 molybdopterin-guanine 20.3 3.8E+02 0.0083 26.7 7.7 43 264-310 78-120 (200)
No 1
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=8.3e-177 Score=1497.60 Aligned_cols=703 Identities=38% Similarity=0.734 Sum_probs=652.7
Q ss_pred CCCCCCceeeeecCcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhcceecc
Q 005037 3 SDGYLPLFETRRVKGRIFYRVFVVSVFVCIFFIWVYRLCHIPNKHENGKLLWVWIGLFAAELWLGFYWIFTQSLRWNRVR 82 (717)
Q Consensus 3 ~~~~~~l~~~~~~~~~~~~r~~~~~~~~~~~~~~~~R~~~l~~~~~~~~~~~~~~~~~~~E~~~~~~~~l~~~~~~~p~~ 82 (717)
+...+||||+++.+++.+||+++++++++|+++++||+++++..+ ..|.|+++++||+||+|+|+++|++||+|++
T Consensus 8 ~~~~~pL~~~~~~~~~~~~R~~~~~~~~~i~~ll~~r~~~~~~~~----~~~~w~~~~~~e~wf~f~W~l~q~~k~~Pv~ 83 (734)
T PLN02893 8 STGAPPLHTCHPMRRTIANRVFAVVYSCAILALLYHHVIALLHST----TTLITLLLLLADIVLAFMWATTQAFRMCPVH 83 (734)
T ss_pred CCCCCCceeeeecCCchHHHHHHHHHHHHHHHHHHHHhccccccc----chHHHHHHHHHHHHHHHHHHHccCccccccc
Confidence 445678999999999988999999999999999999999877652 2689999999999999999999999999999
Q ss_pred cccccccccccc-cCCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhccccc
Q 005037 83 RLTFRDRLSQRY-EDKLPGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTH 161 (717)
Q Consensus 83 r~~~~~~l~~~~-~~~~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~ 161 (717)
|.+++|||+++. ++++|+|||||||+||.||||.+++|||+|+||+|||.||++|||||||++.+|+|+|.||++|||+
T Consensus 84 r~~~~~~L~~~~~~~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDDGgs~lt~~al~Eaa~FA~~ 163 (734)
T PLN02893 84 RRVFIEHLEHYAKESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATH 163 (734)
T ss_pred cccCHHHHhhhcccccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecCCccHHHHHHHHHHHHHHHh
Confidence 999999998765 3569999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhhcCCCCCCchhhhhHH-------------HHHHHHHHHHHhhhcccchHHH---HHhhcCcccccCCCCCCCCc
Q 005037 162 WIPYCKKFNVEPRSPAAYFINR-------------LYEEMENRIQTATKLGRITEEI---RMKHKGFSQWDSYSSPLDHD 225 (717)
Q Consensus 162 w~pfc~~~~v~~r~p~~yf~~~-------------~ye~~~~ri~~~~~~~~~~~~~---~~~~~g~~~w~~~~~~~~h~ 225 (717)
|+||||||+|||||||+||+++ ||||||+|||++++.+++++|. +.++++|+.|+++++++|||
T Consensus 164 WvPFCrk~~ie~R~P~~YF~~~~~~~~~e~~~~k~~Yee~k~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~dH~ 243 (734)
T PLN02893 164 WLPFCKKNKIVERCPEAYFSSNSHSWSPETEQIKMMYESMKVRVENVVERGKVSTDYITCDQEREAFSRWTDKFTRQDHP 243 (734)
T ss_pred hcccccccCCCcCCHHHHhccCCCccchHHHHHHHHHHHHHHHHHHHHhcCcCchhhhhhcccccccccCcCCCCCCCCC
Confidence 9999999999999999999864 9999999999999999999886 34456799999999999999
Q ss_pred cceeeeecCCCCCccccccCCCCeEEEEeeccCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHH
Q 005037 226 TILQILIDGRDPNAVDNERCALPTLVYLAREKRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDAL 305 (717)
Q Consensus 226 ~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekrp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v 305 (717)
+||||++++++. .|.+|.++|+++|++|||||+++||+||||||+++|+|+.++|||||+++||||++|||++++++|
T Consensus 244 ~ivqV~l~~~~~--~d~~g~~lP~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~p~~l~~am 321 (734)
T PLN02893 244 TVIQVLLESGKD--KDITGHTMPNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSNDPQTPLRAL 321 (734)
T ss_pred ceeeeeccCCCc--cchhhccCCceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCcCCCchhHHHHHH
Confidence 999999998753 456788999999999999999999999999999999999999999999999999998899999999
Q ss_pred HHhhccCCCCeEEEEeccceeccCCcchhhhhhHHHHHHHHHhhhhccCCcccccccceEehhhhccCCCC--chhhHhh
Q 005037 306 CFFIDEEKGHEVAFVQFPQNFDNVTKNELYSNSSRIFNEVELQGLDGYGCPLYTGSGCFHRREILCGSKYN--KETKIEW 383 (717)
Q Consensus 306 ~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~--~~~~~~~ 383 (717)
|||+||+.++++|+||+||+|+|.++||+|++++++||+++++|+||++|++||||||+|||+||++.... .+...++
T Consensus 322 cff~Dp~~~~~vafVQfPQ~F~~i~~~D~y~~~~~vff~~~~~glDG~~gp~y~GTGc~~RR~al~G~~~~~~~~~~~~~ 401 (734)
T PLN02893 322 CYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGELKRLFQINMIGMDGLAGPNYVGTGCFFRRRVFYGGPSSLILPEIPEL 401 (734)
T ss_pred HHhcCCCcCCceEEEeCcccccCCCcCCCCcchhHHHHHHHhhcccccCCceeeccceEEEHHHhcCCCccccchhhhhc
Confidence 99999988899999999999999999999999999999999999999999999999999999999985321 0111111
Q ss_pred hccCCCccchhhhhHHHhhhhcccccccccCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCccccccCCcCHH
Q 005037 384 KSKKDSKGEESLLDLEETSKALASCTYERNTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDAFLGVSPTTLL 463 (717)
Q Consensus 384 ~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a~~g~aP~tl~ 463 (717)
+..-........++++++|++|++|.||++|.||+++||.|+|+|||++||++||++||||+||+|++++|.|++|+|+.
T Consensus 402 ~~~~~~~~~~~~~~~~~~a~~v~sC~ye~~t~WG~~~G~~ygsvtED~~Tg~~lh~~GWrSvY~~p~~~af~G~aP~~l~ 481 (734)
T PLN02893 402 NPDHLVDKSIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVEDYYTGYRLQCEGWKSIFCNPKRPAFLGDSPINLH 481 (734)
T ss_pred ccccccccccchHHHHHHhhhccccccccCCccccccceEeccccccHHHHHHHHhcCCcEEecCCCchhhccCCCCCHH
Confidence 11011112234567899999999999999999999999999999999999999999999999999878899999999999
Q ss_pred HHHHHHHHHhcchHHHHHhhhcccccccCCCchhHHHHHhhhhhhhhHHHHHHHHHHHhhHHHhhCCCccccCchhhHHH
Q 005037 464 QLLVQHKRWSEGNFQIFISKYCPAWHAHGKISLGFRLGYCCYGLWAPSCLATLFYSVVPSLYLLKGIPLFPEITSPWIIP 543 (717)
Q Consensus 464 ~~~~Qr~RWa~G~lqil~~~~~pl~~~~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~ll~g~~~~p~~~~~~~lp 543 (717)
++++||+||+.|++|++++|+||+++|.++|++.||++|++.++|++.++++++|+++|++||++|++++|+.+.+|+++
T Consensus 482 ~~l~Q~~RWa~G~lqI~~s~~nPl~~g~~~L~~~Qrl~Y~~~~~~~~~slp~liY~~~P~l~Ll~g~~i~p~~s~~~f~~ 561 (734)
T PLN02893 482 DVLNQQKRWSVGLLEVAFSKYSPITFGVKSIGLLMGLGYAHYAFWPIWSIPITIYAFLPQLALLNGVSIFPKASDPWFFL 561 (734)
T ss_pred HHHHHHHHHHhhhHHHHhhccCchhhcccCCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcccccccHHHHHH
Confidence 99999999999999999999999987777899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCccccchhhhhHHHHHHHHhHHHHHHHHHHHHhCCCCCCeeeCccCCcchhhhhhhccee
Q 005037 544 FAYVIFAKYGGSLVEFLWCGGTALGWWNDQRLWLYKRTSSYLFAFIDTILKTLGFSESAFVVTAKVADQDVLERYEKEIM 623 (717)
Q Consensus 544 ~~~~~~~~~~~~ll~~~~~g~~~~~ww~~~r~w~i~~~~~~l~~~~~~l~k~lg~~~~~F~VT~K~~~~~~~~~y~~~~~ 623 (717)
++++++++++++++|++|+|.++++|||+||+|+|+++++++++++++++|.+|+++.+|+||+|+.++++.++|++|.|
T Consensus 562 yi~l~~s~~~~~~lE~~~sG~t~~~WWn~qr~w~I~~~ss~l~a~l~~iLk~lg~s~~~F~VT~K~~~~~~~~~y~~~~f 641 (734)
T PLN02893 562 YIFLFLGAYGQDLLDFLLSGGTIQRWWNDQRMWMIRGLSSFLFGLVEFLLKTLGISTFGFNVTSKVVDEEQSKRYEQGIF 641 (734)
T ss_pred HHHHHHHHHHHHHHHHhccCccHhhhcchheeeehHHHHHHHHHHHHHHHHHhcccCCceeecCCCccccccccccccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999988877899999999
Q ss_pred eecccchhHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCchHHHH
Q 005037 624 EFGDTSSMFTILSTLALLNLFCLIGAVKRVIIDDGFVKLYETMILQILLCSTLVLINWPLYQGLFLRKDNGKMPSSLTAK 703 (717)
Q Consensus 624 ~f~~~~~l~~p~~~l~~l~l~al~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~P~~~gl~~r~~~~~~p~~~~~~ 703 (717)
+|+.++|+++|+++++++|++|+++|+++++.+ ..|+++++|++||+|+|++++||++||++||||||||+||++|
T Consensus 642 ~f~~~spl~ip~ttl~llNl~a~v~Gi~~~~~~----~~~~~~~~~~~~~~~~v~~~~P~~~gl~~r~dkg~~P~~v~~~ 717 (734)
T PLN02893 642 EFGVSSPMFLPLTTAAIINLVSFLWGIAQIFRQ----RNLEGLFLQMFLAGFAVVNCWPIYEAMVLRTDDGKLPVKITLI 717 (734)
T ss_pred eecccchhHHHHHHHHHHHHHHHHHHHHHHHhC----CchhHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCccHHHH
Confidence 998789999999999999999999999999865 3688999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhc
Q 005037 704 TLVLALVLFGIE 715 (717)
Q Consensus 704 s~~~~~~~~~~~ 715 (717)
|++||+++|.++
T Consensus 718 s~~l~~~~~~~~ 729 (734)
T PLN02893 718 SIVLAWALYLAS 729 (734)
T ss_pred HHHHHHHHHHHH
Confidence 999999999765
No 2
>PLN02436 cellulose synthase A
Probab=100.00 E-value=7.3e-176 Score=1511.90 Aligned_cols=695 Identities=35% Similarity=0.660 Sum_probs=636.8
Q ss_pred CCCCCceeeeecCcchh--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhcceec
Q 005037 4 DGYLPLFETRRVKGRIF--YRVFVVSVFVCIFFIWVYRLCHIPNKHENGKLLWVWIGLFAAELWLGFYWIFTQSLRWNRV 81 (717)
Q Consensus 4 ~~~~~l~~~~~~~~~~~--~r~~~~~~~~~~~~~~~~R~~~l~~~~~~~~~~~~~~~~~~~E~~~~~~~~l~~~~~~~p~ 81 (717)
+.++||++|.+++++.+ ||+++++++++++++++||+++.++ ++.|+|+++++||+||+|+|+++|++||+|+
T Consensus 268 ~~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~~-----~a~~~Wl~s~~cE~WFaf~Wll~Q~~Kw~Pv 342 (1094)
T PLN02436 268 EGRQPLSRKLPIPSSKINPYRMIIILRLVILGLFFHYRILHPVN-----DAYGLWLTSVICEIWFAVSWILDQFPKWYPI 342 (1094)
T ss_pred ccCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCc-----ccHHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence 34678999999999875 9999999999999999999998544 3589999999999999999999999999999
Q ss_pred cccccccccccccc-----CCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhh
Q 005037 82 RRLTFRDRLSQRYE-----DKLPGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEAS 156 (717)
Q Consensus 82 ~r~~~~~~l~~~~~-----~~~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~ 156 (717)
+|.+|+|||+++++ .+||+|||||||+||.||||.+++|||+|+||+|||.|||+|||||||++.+|+|+|.||+
T Consensus 343 ~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa 422 (1094)
T PLN02436 343 ERETYLDRLSLRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETS 422 (1094)
T ss_pred cceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHH
Confidence 99999999998874 3499999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhhhhcCCCCCCchhhhhHH---------------------HHHHHHHHHHHhhhc-ccchHHHHHhhcCccc
Q 005037 157 HFSTHWIPYCKKFNVEPRSPAAYFINR---------------------LYEEMENRIQTATKL-GRITEEIRMKHKGFSQ 214 (717)
Q Consensus 157 ~fa~~w~pfc~~~~v~~r~p~~yf~~~---------------------~ye~~~~ri~~~~~~-~~~~~~~~~~~~g~~~ 214 (717)
+|||+||||||||+|||||||+||+++ ||||||+|||++++. +++++|.+.+.+| ++
T Consensus 423 ~FAk~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp~~~~~m~dg-t~ 501 (1094)
T PLN02436 423 EFARKWVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVPEDGWTMQDG-TP 501 (1094)
T ss_pred HHHHhhcccccccCCCcCCHHHHhhccCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhhhhccC-cc
Confidence 999999999999999999999999873 999999999999975 9999998655555 89
Q ss_pred ccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCC
Q 005037 215 WDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMY 294 (717)
Q Consensus 215 w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekrp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~ 294 (717)
|+++ +++|||+||||++++++. .|.+|+++|+||||+|||||+++||+||||||+++|+|+.+||||||+++|||||
T Consensus 502 W~g~-~~~dHp~IIqVll~~~~~--~d~~g~~LP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDCDmY 578 (1094)
T PLN02436 502 WPGN-NVRDHPGMIQVFLGHSGV--RDVEGNELPRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHY 578 (1094)
T ss_pred CCCC-CCCCCccceEEEecCCCC--cccccccCceEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEecccccc
Confidence 9975 789999999999998753 4678899999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhhhhhHHHHHHHHHhhhhccCCcccccccceEehhhhccCC
Q 005037 295 SNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELYSNSSRIFNEVELQGLDGYGCPLYTGSGCFHRREILCGSK 374 (717)
Q Consensus 295 ~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~ 374 (717)
.|||+++|++||||+||+.++++||||+||+|+|+++||+|+|++++||++.++|+||+|||+|+||||+|||+||++..
T Consensus 579 iNns~a~r~AMCfllD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~~~GlDGlqGP~YvGTGC~frR~aLYG~~ 658 (1094)
T PLN02436 579 INNSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYD 658 (1094)
T ss_pred cCchHHHHHhhhhhcCCccCCeeEEEcCCcccCCCCCCCcccccceEeeeccccccccCCCccccccCceeeeeeeeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999975
Q ss_pred CCchhhHhhh------------------------------------------------------------------c---
Q 005037 375 YNKETKIEWK------------------------------------------------------------------S--- 385 (717)
Q Consensus 375 ~~~~~~~~~~------------------------------------------------------------------~--- 385 (717)
+.+..+.++. +
T Consensus 659 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG 738 (1094)
T PLN02436 659 APKKKKPPGKTCNCWPKWCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHALENIEEGIEGSNNEKSSETPQLKLEKKFG 738 (1094)
T ss_pred CccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHhhhc
Confidence 4321110000 0
Q ss_pred -----------cCCCcc-chhhhhHHHhhhhcccccccccCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCcc
Q 005037 386 -----------KKDSKG-EESLLDLEETSKALASCTYERNTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDA 453 (717)
Q Consensus 386 -----------~igg~~-~~~~~~~~~~~~~v~~c~Ye~~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a 453 (717)
..|+.. ....++++++|++|++|+||++|.||+++||.|||+|||+.||++||++||||+||+|++++
T Consensus 739 ~S~~fi~S~~~~~~~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwiYGSvTEDv~TG~rLH~rGWrSvY~~P~r~A 818 (1094)
T PLN02436 739 QSPVFVASTLLENGGVPRNASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPA 818 (1094)
T ss_pred ccHHHHHHHHHhhcCCCCCCCcHHHHHHHHHhhcCCCcccChhhHhhCeeccceecHHHHHHHHHcCCCceEeCCCCchh
Confidence 001111 11346788999999999999999999999999999999999999999999999999888889
Q ss_pred ccccCCcCHHHHHHHHHHHhcchHHHHHhhhcccccc-cCCCchhHHHHHhhhhhhhhHHHHHHHHHHHhhHHHhhCCCc
Q 005037 454 FLGVSPTTLLQLLVQHKRWSEGNFQIFISKYCPAWHA-HGKISLGFRLGYCCYGLWAPSCLATLFYSVVPSLYLLKGIPL 532 (717)
Q Consensus 454 ~~g~aP~tl~~~~~Qr~RWa~G~lqil~~~~~pl~~~-~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~ll~g~~~ 532 (717)
|.|+||+|+.+++.||+||++|++||+++|+||+++| .++|+++||++|+++++|+++++++++|+++|++||++|+++
T Consensus 819 F~GlAP~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl~~~ly~l~Slp~liY~~lP~l~LL~G~~i 898 (1094)
T PLN02436 819 FKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTSIPLIVYCTLPAICLLTGKFI 898 (1094)
T ss_pred hcCcCCCCHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCee
Confidence 9999999999999999999999999999999999876 458999999999999999999999999999999999999999
Q ss_pred cccCchhhHHHHHHHHHHHHHHHHHHHHHhCCccccchhhhhHHHHHHHHhHHHHHHHHHHHHhCCCCCCeeeCccCCcc
Q 005037 533 FPEITSPWIIPFAYVIFAKYGGSLVEFLWCGGTALGWWNDQRLWLYKRTSSYLFAFIDTILKTLGFSESAFVVTAKVADQ 612 (717)
Q Consensus 533 ~p~~~~~~~lp~~~~~~~~~~~~ll~~~~~g~~~~~ww~~~r~w~i~~~~~~l~~~~~~l~k~lg~~~~~F~VT~K~~~~ 612 (717)
+|.++.+|+++|+++|+++++++++|++|+|.++++|||+||||+|.++++++|+++++++|.||+++++|.||+|..++
T Consensus 899 ~P~vs~~~~~~fi~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLggs~~~F~VTsK~~d~ 978 (1094)
T PLN02436 899 VPEISNYASILFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVNTNFTVTSKAADD 978 (1094)
T ss_pred cCccchHHHHHHHHHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcccceeccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998764
Q ss_pred hhhhhhhcceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcccC
Q 005037 613 DVLERYEKEIMEFGDTSSMFTILSTLALLNLFCLIGAVKRVIIDDGFVKLYETMILQILLCSTLVLINWPLYQGLFLRKD 692 (717)
Q Consensus 613 ~~~~~y~~~~~~f~~~~~l~~p~~~l~~l~l~al~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~P~~~gl~~r~~ 692 (717)
+. ..+.|+|+ |+++++|+++++++|++|+++|+.+++.+ + ...|+.+++++|+|+|+|+++|||++||++|
T Consensus 979 ~~----~a~ly~f~-~S~L~iP~tti~ilNlvaiv~Gi~~~i~~-g-~~~~g~l~~~l~~~~wvvv~lyPf~kgL~gr-- 1049 (1094)
T PLN02436 979 GE----FSELYLFK-WTSLLIPPTTLLIINIIGVIVGVSDAINN-G-YDSWGPLFGRLFFALWVIVHLYPFLKGLLGK-- 1049 (1094)
T ss_pred cc----ccceeeec-ceeHhHHHHHHHHHHHHHHHHHHHHHHhc-c-ccchhHHHHHHHHHHHHHHHHHHHHHHHhcc--
Confidence 31 12455885 89999999999999999999999999875 3 2579999999999999999999999999955
Q ss_pred CCCCCchHHHHHHHHHHHHHhhcc
Q 005037 693 NGKMPSSLTAKTLVLALVLFGIEV 716 (717)
Q Consensus 693 ~~~~p~~~~~~s~~~~~~~~~~~~ 716 (717)
++|+|++|++||+++|++++.+-|
T Consensus 1050 ~~r~P~~v~v~s~lla~~~~l~~v 1073 (1094)
T PLN02436 1050 QDRMPTIILVWSILLASILTLLWV 1073 (1094)
T ss_pred CCCCCeeehHHHHHHHHHHHHHHe
Confidence 459999999999999998877643
No 3
>PLN02400 cellulose synthase
Probab=100.00 E-value=1.2e-175 Score=1516.56 Aligned_cols=695 Identities=34% Similarity=0.653 Sum_probs=638.2
Q ss_pred CCCCCceeeeecCcc--hhHHHHHHHHHHHHHHHHHHHhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhcceec
Q 005037 4 DGYLPLFETRRVKGR--IFYRVFVVSVFVCIFFIWVYRLCHIPNKHENGKLLWVWIGLFAAELWLGFYWIFTQSLRWNRV 81 (717)
Q Consensus 4 ~~~~~l~~~~~~~~~--~~~r~~~~~~~~~~~~~~~~R~~~l~~~~~~~~~~~~~~~~~~~E~~~~~~~~l~~~~~~~p~ 81 (717)
+.++||+++.+++++ ..||+++++++++++++++||+++.++ ++.|+|+++++||+||+|+|+++|++||+|+
T Consensus 259 ~~~~pL~~~~~i~~~~~~~yR~~~~~~lv~l~~~l~yRi~~~~~-----~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv 333 (1085)
T PLN02400 259 DARLPMSRVVPIPSSRLTPYRIVIILRLIILGFFLQYRVTHPVK-----DAYGLWLTSVICEIWFALSWLLDQFPKWYPI 333 (1085)
T ss_pred cccCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCc-----ccHHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence 346789999999988 469999999999999999999998544 3589999999999999999999999999999
Q ss_pred cccccccccccccc-----CCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhh
Q 005037 82 RRLTFRDRLSQRYE-----DKLPGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEAS 156 (717)
Q Consensus 82 ~r~~~~~~l~~~~~-----~~~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~ 156 (717)
+|.+|+|||+++++ .+||+|||||||+||.||||.+++|||+|+||+|||.|||+|||||||++.+|+|+|.||+
T Consensus 334 ~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~Al~Eaa 413 (1085)
T PLN02400 334 NRETYLDRLALRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETA 413 (1085)
T ss_pred cceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHH
Confidence 99999999998874 3499999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhhhhcCCCCCCchhhhhHH---------------------HHHHHHHHHHHhh-hcccchHHHHHhhcCccc
Q 005037 157 HFSTHWIPYCKKFNVEPRSPAAYFINR---------------------LYEEMENRIQTAT-KLGRITEEIRMKHKGFSQ 214 (717)
Q Consensus 157 ~fa~~w~pfc~~~~v~~r~p~~yf~~~---------------------~ye~~~~ri~~~~-~~~~~~~~~~~~~~g~~~ 214 (717)
+|||+||||||||+|||||||+||+++ ||||||.|||+++ +.++++++.+.+ +++++
T Consensus 414 ~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~~~~~~~~~~~~~m-~dgt~ 492 (1085)
T PLN02400 414 EFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKIPEEGWTM-QDGTP 492 (1085)
T ss_pred HHHHhhcchhhhcCCCcCCHHHHhccCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccc-ccCcc
Confidence 999999999999999999999999874 9999999999998 788999887544 45699
Q ss_pred ccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCC
Q 005037 215 WDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMY 294 (717)
Q Consensus 215 w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekrp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~ 294 (717)
|+++ +++|||+||||++++++. .|.+|+++|+||||+|||||+++||+||||||+++|+|+++||||||+++|||||
T Consensus 493 W~g~-~~~dHp~iIqVll~~~~~--~d~~g~~LP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~ILNlDCDmY 569 (1085)
T PLN02400 493 WPGN-NPRDHPGMIQVFLGHSGG--LDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHY 569 (1085)
T ss_pred CCCC-CCCCCchhhhhhhcCCCC--cccccccCceeEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCCceEEecccccc
Confidence 9975 789999999999998753 4668899999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhhhhhHHHHHHHHHhhhhccCCcccccccceEehhhhccCC
Q 005037 295 SNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELYSNSSRIFNEVELQGLDGYGCPLYTGSGCFHRREILCGSK 374 (717)
Q Consensus 295 ~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~ 374 (717)
+|||+++|++||||+||+.++++||||+||+|+|+++||+|+|++++||++.++|+||+|||+|+||||+|||+||++.+
T Consensus 570 ~Nns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gi~~~D~Y~n~~~vffdi~~~GldGlqGP~YvGTGC~frR~aLYG~~ 649 (1085)
T PLN02400 570 FNNSKALKEAMCFMMDPAIGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYD 649 (1085)
T ss_pred cCCchhHHhhhhheeccCCCceeEEEeCCcccCCCCCCCCcccceeEEeeccccccccCCCccccccCcceeeeeeccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CCch--h-h----------------------Hhhhcc-------------------------------------------
Q 005037 375 YNKE--T-K----------------------IEWKSK------------------------------------------- 386 (717)
Q Consensus 375 ~~~~--~-~----------------------~~~~~~------------------------------------------- 386 (717)
+... . + .++++.
T Consensus 650 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S 729 (1085)
T PLN02400 650 PVLTEEDLEPNIIVKSCCGSRKKGKGSKKYNIDKKRAMKRTESNVPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQS 729 (1085)
T ss_pred Cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhhcccc
Confidence 4200 0 0 000000
Q ss_pred ----------CCC-ccchhhhhHHHhhhhcccccccccCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCcccc
Q 005037 387 ----------KDS-KGEESLLDLEETSKALASCTYERNTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDAFL 455 (717)
Q Consensus 387 ----------igg-~~~~~~~~~~~~~~~v~~c~Ye~~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a~~ 455 (717)
.|+ ......++++++|++|++|+||++|.||+|+||.|||+|||+.||++||++||||+||+|++++|.
T Consensus 730 ~~fi~S~~~~~~~~~~~~~~~~ll~eA~~V~sC~YE~~T~WG~evGwiYGSvTED~~TG~~LH~rGWrSvY~~p~r~af~ 809 (1085)
T PLN02400 730 PVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFK 809 (1085)
T ss_pred HHHHHHHHHHhcCCCCCCCcHHHHHHHHHhhccCCccCCchhhhhCeeccceechHHHHHHHHccCCceEecCCCcHhhc
Confidence 000 011234678899999999999999999999999999999999999999999999999998888999
Q ss_pred ccCCcCHHHHHHHHHHHhcchHHHHHhhhcccccc-cCCCchhHHHHHhhhhhhhhHHHHHHHHHHHhhHHHhhCCCccc
Q 005037 456 GVSPTTLLQLLVQHKRWSEGNFQIFISKYCPAWHA-HGKISLGFRLGYCCYGLWAPSCLATLFYSVVPSLYLLKGIPLFP 534 (717)
Q Consensus 456 g~aP~tl~~~~~Qr~RWa~G~lqil~~~~~pl~~~-~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~ll~g~~~~p 534 (717)
|+||+|+.+++.||+||++|++||+++++||+++| .++|+++||++|+++++||+.++++++|+++|++||++|++++|
T Consensus 810 GlAP~~l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~~~L~l~QRL~Yl~~~~y~~~slp~liY~llP~l~LltG~~i~P 889 (1085)
T PLN02400 810 GSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLLAYCVLPAFCLITNKFIIP 889 (1085)
T ss_pred CcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCC
Confidence 99999999999999999999999999999999876 47899999999999999999999999999999999999999999
Q ss_pred cCchhhHHHHHHHHHHHHHHHHHHHHHhCCccccchhhhhHHHHHHHHhHHHHHHHHHHHHhCCCCCCeeeCccCCcchh
Q 005037 535 EITSPWIIPFAYVIFAKYGGSLVEFLWCGGTALGWWNDQRLWLYKRTSSYLFAFIDTILKTLGFSESAFVVTAKVADQDV 614 (717)
Q Consensus 535 ~~~~~~~lp~~~~~~~~~~~~ll~~~~~g~~~~~ww~~~r~w~i~~~~~~l~~~~~~l~k~lg~~~~~F~VT~K~~~~~~ 614 (717)
.++.+|+++|+++++++++++++|++|+|+++++|||+||||+|.++++++|+++++++|+||+++++|.||+|..+++.
T Consensus 890 ~vs~~~~~~fi~lf~~~~~~~lLE~~~sG~si~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvLgg~~~~F~VTsK~~d~~~ 969 (1085)
T PLN02400 890 EISNYASMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDG 969 (1085)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHhhcCccHHHhhhccceeeehhhHHHHHHHHHHHHHHhcCCcccceecCCcccccc
Confidence 99989999999999999999999999999999999999999999999999999999999999999999999999876543
Q ss_pred hhhhhcceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcccCCC
Q 005037 615 LERYEKEIMEFGDTSSMFTILSTLALLNLFCLIGAVKRVIIDDGFVKLYETMILQILLCSTLVLINWPLYQGLFLRKDNG 694 (717)
Q Consensus 615 ~~~y~~~~~~f~~~~~l~~p~~~l~~l~l~al~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~P~~~gl~~r~~~~ 694 (717)
. ..|+|+|+ |+++|+|+++++++|++|+++|+++++.+ + ...|+.+++|+++|+|+|+++|||++||++|+ +
T Consensus 970 ~---~~ely~f~-~s~L~iP~ttl~llNlvaiv~Gv~~~i~~-g-~~~~g~l~~~~~~~~wvvv~l~Pf~kgL~gR~--~ 1041 (1085)
T PLN02400 970 D---FAELYVFK-WTSLLIPPTTVLLVNLVGIVAGVSYAINS-G-YQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQ--N 1041 (1085)
T ss_pred c---ccceeeec-ccchhHHHHHHHHHHHHHHHHHHHHHHhc-c-cchhhHHHHHHHHHHHHHHHHHHHHHHHhccC--C
Confidence 1 36788996 99999999999999999999999999875 3 35799999999999999999999999999887 7
Q ss_pred CCCchHHHHHHHHHHHHHhhc
Q 005037 695 KMPSSLTAKTLVLALVLFGIE 715 (717)
Q Consensus 695 ~~p~~~~~~s~~~~~~~~~~~ 715 (717)
|+|++|++||++||++++.+-
T Consensus 1042 r~P~~v~~~s~lla~~~~l~~ 1062 (1085)
T PLN02400 1042 RTPTIVIVWSILLASIFSLLW 1062 (1085)
T ss_pred CCceeHHHHHHHHHHHHHHHh
Confidence 999999999999999887653
No 4
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=2.2e-175 Score=1513.78 Aligned_cols=695 Identities=34% Similarity=0.652 Sum_probs=637.1
Q ss_pred CCCCCceeeeecCcc--hhHHHHHHHHHHHHHHHHHHHhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhcceec
Q 005037 4 DGYLPLFETRRVKGR--IFYRVFVVSVFVCIFFIWVYRLCHIPNKHENGKLLWVWIGLFAAELWLGFYWIFTQSLRWNRV 81 (717)
Q Consensus 4 ~~~~~l~~~~~~~~~--~~~r~~~~~~~~~~~~~~~~R~~~l~~~~~~~~~~~~~~~~~~~E~~~~~~~~l~~~~~~~p~ 81 (717)
+.++||++|.+++++ ..||+++++++++++++++||+++.+ . +++|+|+++++||+||+|+|+++|++||+|+
T Consensus 252 ~~~~pL~~~~~i~~~~~~~yR~~~~~~l~~l~~~l~yRi~~~~-~----~~~~~Wl~s~~cE~WFaf~Wll~q~~Kw~Pv 326 (1079)
T PLN02638 252 EARQPLSRKVSIPSSRINPYRMVIVLRLVILCIFLHYRITNPV-R----NAYALWLISVICEIWFALSWILDQFPKWLPV 326 (1079)
T ss_pred cCCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHHhccC-C----ccHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 456789999999998 46999999999999999999999854 3 4589999999999999999999999999999
Q ss_pred cccccccccccccc-----CCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhh
Q 005037 82 RRLTFRDRLSQRYE-----DKLPGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEAS 156 (717)
Q Consensus 82 ~r~~~~~~l~~~~~-----~~~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~ 156 (717)
+|.+|+|||+++++ .+||+|||||||+||.||||.+++|||+|+||+|||.|||+|||||||++.+|+|+|.||+
T Consensus 327 ~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa 406 (1079)
T PLN02638 327 NRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETS 406 (1079)
T ss_pred ccccCHHHHHHHhccCCCcccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHH
Confidence 99999999998874 3499999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhhhhcCCCCCCchhhhhHH---------------------HHHHHHHHHHHhh-hcccchHHHHHhhcCccc
Q 005037 157 HFSTHWIPYCKKFNVEPRSPAAYFINR---------------------LYEEMENRIQTAT-KLGRITEEIRMKHKGFSQ 214 (717)
Q Consensus 157 ~fa~~w~pfc~~~~v~~r~p~~yf~~~---------------------~ye~~~~ri~~~~-~~~~~~~~~~~~~~g~~~ 214 (717)
+|||+||||||||+|||||||+||+++ ||||||+|||.++ +.+++|++.+.+. ++++
T Consensus 407 ~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~~~~p~~~~~m~-dgt~ 485 (1079)
T PLN02638 407 EFARKWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWIMQ-DGTP 485 (1079)
T ss_pred HHHHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCcccccc-CCcc
Confidence 999999999999999999999999874 9999999999988 6788998865444 4599
Q ss_pred ccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCC
Q 005037 215 WDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMY 294 (717)
Q Consensus 215 w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekrp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~ 294 (717)
|+++ +++|||+||||++++++. .|.+|.++|+|+||+|||||+++||+||||||+++|+|+.+||||||+++||||+
T Consensus 486 W~g~-~~~dHp~IiqVll~~~~~--~d~~g~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY 562 (1079)
T PLN02638 486 WPGN-NTRDHPGMIQVFLGHSGG--LDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHY 562 (1079)
T ss_pred CCCC-CCCCCHHHHHHHhcCCCc--cccccccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCcc
Confidence 9976 789999999999998753 4668899999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhhhhhHHHHHHHHHhhhhccCCcccccccceEehhhhccCC
Q 005037 295 SNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELYSNSSRIFNEVELQGLDGYGCPLYTGSGCFHRREILCGSK 374 (717)
Q Consensus 295 ~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~ 374 (717)
+|||++++++||||+||+.++++||||+||+|+|++++|+|+|++++||+++++|+||+|||+|+||||+|||+||++.+
T Consensus 563 iNns~alr~AMCf~lDp~~g~~vafVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALYG~~ 642 (1079)
T PLN02638 563 INNSKALREAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYE 642 (1079)
T ss_pred cCchHHHHHhhhhhcCcccCCeeEEecCCcccCCCCCCCcccccceeeeccccccccccCCccccccCcceeehhhcCcC
Confidence 99999999999999999989999999999999999999999999999999999999999999999999999999999874
Q ss_pred CCchh-----------------------hHhhhcc---------------------------------------------
Q 005037 375 YNKET-----------------------KIEWKSK--------------------------------------------- 386 (717)
Q Consensus 375 ~~~~~-----------------------~~~~~~~--------------------------------------------- 386 (717)
+.+.. ++.+.+.
T Consensus 643 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG 722 (1079)
T PLN02638 643 PPIKPKHKKPGFLSSLCGGSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFG 722 (1079)
T ss_pred Ccccccccccccccccccccccccccccchhhccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhcc
Confidence 32100 0001000
Q ss_pred ------------CCC-ccchhhhhHHHhhhhcccccccccCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCcc
Q 005037 387 ------------KDS-KGEESLLDLEETSKALASCTYERNTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDA 453 (717)
Q Consensus 387 ------------igg-~~~~~~~~~~~~~~~v~~c~Ye~~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a 453 (717)
.++ ......++++++|++|++|+||++|.||+++||.|||+|||+.||++||++||||+||+|++++
T Consensus 723 ~S~~fi~S~~~~~~~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~P~r~A 802 (1079)
T PLN02638 723 QSAVFVASTLMENGGVPQSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPA 802 (1079)
T ss_pred ccHHHHHHHHHhhcCCCCCCCcHHHHHHHHhhccCCCccCCchhhhcCeeecceecHHHHHHHHHcCCCcEEecCCCchH
Confidence 000 0111345688999999999999999999999999999999999999999999999999887889
Q ss_pred ccccCCcCHHHHHHHHHHHhcchHHHHHhhhcccccc-cCCCchhHHHHHhhhhhhhhHHHHHHHHHHHhhHHHhhCCCc
Q 005037 454 FLGVSPTTLLQLLVQHKRWSEGNFQIFISKYCPAWHA-HGKISLGFRLGYCCYGLWAPSCLATLFYSVVPSLYLLKGIPL 532 (717)
Q Consensus 454 ~~g~aP~tl~~~~~Qr~RWa~G~lqil~~~~~pl~~~-~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~ll~g~~~ 532 (717)
|.|+||+|+.+++.||+||++|++||+++|+||+++| .++|++.||++|+++++||++++++++|+++|++||++|+++
T Consensus 803 F~GlAP~~l~d~L~Qr~RWA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Yl~~~~yp~~sip~liY~llP~l~Ll~G~~i 882 (1079)
T PLN02638 803 FKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYPITSIPLLLYCTLPAVCLLTGKFI 882 (1079)
T ss_pred hcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 9999999999999999999999999999999999876 478999999999999999999999999999999999999999
Q ss_pred cccCchhhHHHHHHHHHHHHHHHHHHHHHhCCccccchhhhhHHHHHHHHhHHHHHHHHHHHHhCCCCCCeeeCccCCcc
Q 005037 533 FPEITSPWIIPFAYVIFAKYGGSLVEFLWCGGTALGWWNDQRLWLYKRTSSYLFAFIDTILKTLGFSESAFVVTAKVADQ 612 (717)
Q Consensus 533 ~p~~~~~~~lp~~~~~~~~~~~~ll~~~~~g~~~~~ww~~~r~w~i~~~~~~l~~~~~~l~k~lg~~~~~F~VT~K~~~~ 612 (717)
+|+++.+|+++|+++|+++++++++|++|+|.++++|||+||||+|.++++++|+++++++|.||+++++|.||+|..++
T Consensus 883 ~P~vs~~~~~~f~~lfl~~~~~~llE~~wsG~si~~WWrnQr~w~I~~tSa~lfavl~~iLK~Lggs~~~F~VTsK~~d~ 962 (1079)
T PLN02638 883 IPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDE 962 (1079)
T ss_pred CCCccchHHHHHHHHHHHHHHHHHHHHHhccccHHHHhhhhhheehhhhHHHHHHHHHHHHHHHccCcccceeccccccc
Confidence 99999998899999999999999999999999999999999999999999999999999999999999999999998765
Q ss_pred hhhhhhhcceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcccC
Q 005037 613 DVLERYEKEIMEFGDTSSMFTILSTLALLNLFCLIGAVKRVIIDDGFVKLYETMILQILLCSTLVLINWPLYQGLFLRKD 692 (717)
Q Consensus 613 ~~~~~y~~~~~~f~~~~~l~~p~~~l~~l~l~al~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~P~~~gl~~r~~ 692 (717)
+.. ++|.|+|+ |+++|+|++|++++|++|+++|+++++.+ + ...|+.+++++++|+|+|+++|||++||++|+
T Consensus 963 ~~~---~~ely~f~-wS~l~iP~ttl~iiNlvaiv~g~~~~~~~-g-~~~~~~~~~~~~~~~wvv~~l~Pf~kgl~gR~- 1035 (1079)
T PLN02638 963 DGD---FAELYMFK-WTTLLIPPTTLLIINLVGVVAGISYAINS-G-YQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQ- 1035 (1079)
T ss_pred ccc---ccceeEec-ceehhHHHHHHHHHHHHHHHHHHHHHHhc-C-ccccchhHHHHHHHHHHHHHHHHHHHHHhccC-
Confidence 432 36889995 99999999999999999999999999875 3 24799999999999999999999999999998
Q ss_pred CCCCCchHHHHHHHHHHHHHhhc
Q 005037 693 NGKMPSSLTAKTLVLALVLFGIE 715 (717)
Q Consensus 693 ~~~~p~~~~~~s~~~~~~~~~~~ 715 (717)
+|+|++|++||+++++.++.+-
T Consensus 1036 -~r~P~~v~v~s~ll~~~~~l~~ 1057 (1079)
T PLN02638 1036 -NRTPTIVVVWSILLASIFSLLW 1057 (1079)
T ss_pred -CCCCeeehHHHHHHHHHHHHHH
Confidence 6889999999999998776653
No 5
>PLN02189 cellulose synthase
Probab=100.00 E-value=4.3e-175 Score=1507.60 Aligned_cols=694 Identities=34% Similarity=0.646 Sum_probs=636.3
Q ss_pred CCCCCceeeeecCcchh--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhcceec
Q 005037 4 DGYLPLFETRRVKGRIF--YRVFVVSVFVCIFFIWVYRLCHIPNKHENGKLLWVWIGLFAAELWLGFYWIFTQSLRWNRV 81 (717)
Q Consensus 4 ~~~~~l~~~~~~~~~~~--~r~~~~~~~~~~~~~~~~R~~~l~~~~~~~~~~~~~~~~~~~E~~~~~~~~l~~~~~~~p~ 81 (717)
+.++||++|.+++++.+ ||+++++++++++++++||+++.++ ++.|+|+++++||+||+|+|+++|++||+|+
T Consensus 234 ~~~~pL~~~~~~~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~~-----~~~~~W~~s~~~E~wFaf~Wll~q~~kw~Pv 308 (1040)
T PLN02189 234 EARQPLSRKVPIASSKVNPYRMVIVARLVVLAFFLRYRILHPVH-----DAIGLWLTSIICEIWFAVSWILDQFPKWFPI 308 (1040)
T ss_pred cCCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhcCcCc-----cchHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence 34678999999999875 9999999999999999999998543 3489999999999999999999999999999
Q ss_pred ccccccccccccccC-----CCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhh
Q 005037 82 RRLTFRDRLSQRYED-----KLPGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEAS 156 (717)
Q Consensus 82 ~r~~~~~~l~~~~~~-----~~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~ 156 (717)
+|.+++|||+++++. +||+|||||||+||.||||.+++|||+|+||+|||.|||+|||||||++.+|+|+|.||+
T Consensus 309 ~R~t~~drL~~r~~~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa 388 (1040)
T PLN02189 309 DRETYLDRLSLRYEREGEPNMLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALSETA 388 (1040)
T ss_pred cceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHH
Confidence 999999999988742 399999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhhhhcCCCCCCchhhhhHH---------------------HHHHHHHHHHHhh-hcccchHHHHHhhcCccc
Q 005037 157 HFSTHWIPYCKKFNVEPRSPAAYFINR---------------------LYEEMENRIQTAT-KLGRITEEIRMKHKGFSQ 214 (717)
Q Consensus 157 ~fa~~w~pfc~~~~v~~r~p~~yf~~~---------------------~ye~~~~ri~~~~-~~~~~~~~~~~~~~g~~~ 214 (717)
+|||+||||||||+|||||||+||+++ ||||||+|||.++ +.+++|++.+.+.+ +++
T Consensus 389 ~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~kvRI~~l~a~~~~~p~~~~~m~d-Gt~ 467 (1040)
T PLN02189 389 EFARKWVPFCKKFSIEPRAPEFYFSLKVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVAKAQKVPPEGWIMQD-GTP 467 (1040)
T ss_pred HHHHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCccCCccceecc-Ccc
Confidence 999999999999999999999999863 9999999999987 68889987654444 489
Q ss_pred ccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCC
Q 005037 215 WDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMY 294 (717)
Q Consensus 215 w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekrp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~ 294 (717)
|+++ +++|||+||||+++++++ .|.+|+++|+|+||+|||||+++||+||||||+++|+|+.+||||||+++||||+
T Consensus 468 W~g~-~~~dHp~IiQVll~~~~~--~d~~g~~lP~LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY 544 (1040)
T PLN02189 468 WPGN-NTRDHPGMIQVFLGHSGG--HDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHY 544 (1040)
T ss_pred CCCC-CCCCCHHHHHHHhcCCCC--ccccccccceeEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCccc
Confidence 9976 789999999999998764 3567889999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhhhhhHHHHHHHHHhhhhccCCcccccccceEehhhhccCC
Q 005037 295 SNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELYSNSSRIFNEVELQGLDGYGCPLYTGSGCFHRREILCGSK 374 (717)
Q Consensus 295 ~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~ 374 (717)
+|||++++++||||+||+.++++||||+||+|+|++++|+|+|+.++||+++++|+||+|||+|+||||+|||+||++..
T Consensus 545 ~Nns~alr~AMCfflDp~~g~~vAfVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALyG~~ 624 (1040)
T PLN02189 545 INNSKAVREAMCFLMDPQIGRKVCYVQFPQRFDGIDTHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYD 624 (1040)
T ss_pred cCchHHHHHhhhhhcCCccCceeEEEeCccccCCCCCCCccCCccceeeeeeecccccCCCccccccCceeeeeeeeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred CCchh----------------------hHhhhc---c----------------------------------CCC-ccchh
Q 005037 375 YNKET----------------------KIEWKS---K----------------------------------KDS-KGEES 394 (717)
Q Consensus 375 ~~~~~----------------------~~~~~~---~----------------------------------igg-~~~~~ 394 (717)
+.+.. +.+++. + .++ .....
T Consensus 625 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~~~~~ 704 (1040)
T PLN02189 625 PPKGPKRPKMVTCDCCPCFGRRKKKHAKNGLNGEVAALGGMESDKEMLMSQMNFEKKFGQSAIFVTSTLMEEGGVPPSSS 704 (1040)
T ss_pred cccccccccccccchhhhcccccccccccccccccccccccchhhhhhhhhhhhHhhhccchhhhhhhhhhhcCCCCCCC
Confidence 43110 000000 0 000 11113
Q ss_pred hhhHHHhhhhcccccccccCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCccccccCCcCHHHHHHHHHHHhc
Q 005037 395 LLDLEETSKALASCTYERNTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDAFLGVSPTTLLQLLVQHKRWSE 474 (717)
Q Consensus 395 ~~~~~~~~~~v~~c~Ye~~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a~~g~aP~tl~~~~~Qr~RWa~ 474 (717)
.++++++|++|++|+||++|.||+++||.|||+|||+.||++||++||||+||+|++++|.|+||+|+.+++.||+||++
T Consensus 705 ~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTED~~TG~rlH~rGWrSvY~~p~r~AF~GlAP~~L~~~L~Qr~RWA~ 784 (1040)
T PLN02189 705 PAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQVLRWAL 784 (1040)
T ss_pred cHHHHHHHHHhhccccccCCchhhccCeeccccccHHHHHHHHHccCCceEecCCCcHHhcCcCCCCHHHHHHHHHHHhh
Confidence 45688999999999999999999999999999999999999999999999999988899999999999999999999999
Q ss_pred chHHHHHhhhccccccc--CCCchhHHHHHhhhhhhhhHHHHHHHHHHHhhHHHhhCCCccccCchhhHHHHHHHHHHHH
Q 005037 475 GNFQIFISKYCPAWHAH--GKISLGFRLGYCCYGLWAPSCLATLFYSVVPSLYLLKGIPLFPEITSPWIIPFAYVIFAKY 552 (717)
Q Consensus 475 G~lqil~~~~~pl~~~~--~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~ll~g~~~~p~~~~~~~lp~~~~~~~~~ 552 (717)
|++||+++++||+++|. ++|++.||++|+++++|+++++++++|+++|++||++|++++|.++.+|+++|+.++++++
T Consensus 785 G~lqI~~sr~nPl~~g~~~~~L~l~QRL~Yl~~~ly~~~sip~liY~~lP~l~Ll~g~~i~p~vs~~~~~~fi~lf~~~~ 864 (1040)
T PLN02189 785 GSVEIFFSRHSPLLYGYKGGNLKWLERFAYVNTTIYPFTSLPLLAYCTLPAICLLTGKFIMPPISTFASLFFIALFMSIF 864 (1040)
T ss_pred hhHHHhhccCCccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCccchHHHHHHHHHHHHHH
Confidence 99999999999998763 6799999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCccccchhhhhHHHHHHHHhHHHHHHHHHHHHhCCCCCCeeeCccCCcchhhhhhhcceeeecccchhH
Q 005037 553 GGSLVEFLWCGGTALGWWNDQRLWLYKRTSSYLFAFIDTILKTLGFSESAFVVTAKVADQDVLERYEKEIMEFGDTSSMF 632 (717)
Q Consensus 553 ~~~ll~~~~~g~~~~~ww~~~r~w~i~~~~~~l~~~~~~l~k~lg~~~~~F~VT~K~~~~~~~~~y~~~~~~f~~~~~l~ 632 (717)
++.++|++|+|.++++|||+||||+|.++++++|+++++++|+||+++++|.||+|..+++. .+|+|+|+ |+++|
T Consensus 865 ~~~llE~~~sG~s~~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvlggs~~~F~VTsK~~~d~~----~~~ly~f~-~s~l~ 939 (1040)
T PLN02189 865 ATGILELRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATDDDE----FGELYAFK-WTTLL 939 (1040)
T ss_pred HHHHHHHHhcCCcHHHHhhhhhHHHHhhhHHHHHHHHHHHHHHhccCcccceeccccccccc----cccceeec-ceeHh
Confidence 99999999999999999999999999999999999999999999999999999999876543 25788996 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHHHH
Q 005037 633 TILSTLALLNLFCLIGAVKRVIIDDGFVKLYETMILQILLCSTLVLINWPLYQGLFLRKDNGKMPSSLTAKTLVLALVLF 712 (717)
Q Consensus 633 ~p~~~l~~l~l~al~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~P~~~gl~~r~~~~~~p~~~~~~s~~~~~~~~ 712 (717)
+|++|++++|++|+++|+++++.+ + ...|+.+++++++|+|+|+++|||++||++|+ ||+|++|++||+++++.++
T Consensus 940 iP~ttl~i~Nlvaiv~g~~~~~~~-~-~~~~~~~~~~~~~~~wvv~~~~Pf~kgl~gR~--~r~P~~v~v~s~ll~~~~~ 1015 (1040)
T PLN02189 940 IPPTTLLIINIVGVVAGISDAINN-G-YQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQ--NRTPTIVVIWSVLLASIFS 1015 (1040)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc-C-ccccchhHHHHHHHHHHHHHHHHHHHHHhccC--CCCCeeehHHHHHHHHHHH
Confidence 999999999999999999999875 3 24799999999999999999999999999998 7889999999999998776
Q ss_pred hhc
Q 005037 713 GIE 715 (717)
Q Consensus 713 ~~~ 715 (717)
.+-
T Consensus 1016 l~~ 1018 (1040)
T PLN02189 1016 LLW 1018 (1040)
T ss_pred HHH
Confidence 653
No 6
>PLN02195 cellulose synthase A
Probab=100.00 E-value=3e-174 Score=1493.97 Aligned_cols=694 Identities=33% Similarity=0.632 Sum_probs=633.9
Q ss_pred CCCCCceeeeecCcchh--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhcceec
Q 005037 4 DGYLPLFETRRVKGRIF--YRVFVVSVFVCIFFIWVYRLCHIPNKHENGKLLWVWIGLFAAELWLGFYWIFTQSLRWNRV 81 (717)
Q Consensus 4 ~~~~~l~~~~~~~~~~~--~r~~~~~~~~~~~~~~~~R~~~l~~~~~~~~~~~~~~~~~~~E~~~~~~~~l~~~~~~~p~ 81 (717)
+.++||++|.+++++.+ ||+++++++++++++++||+++.++ ++.|+|+++++||+||+|+|+++|++||+|+
T Consensus 155 ~~~~pL~~~~~i~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~~-----~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv 229 (977)
T PLN02195 155 DAYEPLSRVIPIPRNKLTPYRAVIIMRLIILGLFFHYRITNPVD-----SAFGLWLTSVICEIWFAFSWVLDQFPKWSPI 229 (977)
T ss_pred cccCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcCccc-----cchHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 45678999999999875 9999999999999999999998544 3469999999999999999999999999999
Q ss_pred cccccccccccccc-----CCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhh
Q 005037 82 RRLTFRDRLSQRYE-----DKLPGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEAS 156 (717)
Q Consensus 82 ~r~~~~~~l~~~~~-----~~~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~ 156 (717)
+|.+++|||+++++ .+||+|||||||+||.||||.+++|||+|+||+|||.|||+|||||||++.+|+|+|.||+
T Consensus 230 ~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa 309 (977)
T PLN02195 230 NRETYIDRLSARYEREGEPSQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETA 309 (977)
T ss_pred cceECHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHH
Confidence 99999999998874 3599999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhhhhcCCCCCCchhhhhHH---------------------HHHHHHHHHHHhhhc-ccchHHHHHhhcCccc
Q 005037 157 HFSTHWIPYCKKFNVEPRSPAAYFINR---------------------LYEEMENRIQTATKL-GRITEEIRMKHKGFSQ 214 (717)
Q Consensus 157 ~fa~~w~pfc~~~~v~~r~p~~yf~~~---------------------~ye~~~~ri~~~~~~-~~~~~~~~~~~~g~~~ 214 (717)
+|||+||||||||+|||||||+||+++ ||||||+|||++++. ++++++.+.+ +++++
T Consensus 310 ~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~k~RIe~~~~~~~~~~~~~~~m-~d~t~ 388 (977)
T PLN02195 310 EFARKWVPFCKKYSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEYKVRVNALVAKAQKTPEEGWTM-QDGTP 388 (977)
T ss_pred HHHHhhcccccccCCCcCCHHHHhccCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccccc-cCCcc
Confidence 999999999999999999999999863 999999999999975 7899887543 55699
Q ss_pred ccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCC
Q 005037 215 WDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMY 294 (717)
Q Consensus 215 w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekrp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~ 294 (717)
|+++ +++|||+||||++++++ +.|.+|+++|+||||+|||||+++||+||||||+++|+|+.+||||||+++||||+
T Consensus 389 W~g~-~~~dHp~IIqVll~~~~--~~d~~g~~lP~LVYVSREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy 465 (977)
T PLN02195 389 WPGN-NTRDHPGMIQVFLGETG--ARDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHY 465 (977)
T ss_pred CCCC-CCCCCcchhhhhccCCC--CcccccccCceeEEEeccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCccc
Confidence 9975 78999999999998865 44668899999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhhhhhHHHHHHHHHhhhhccCCcccccccceEehhhhccCC
Q 005037 295 SNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELYSNSSRIFNEVELQGLDGYGCPLYTGSGCFHRREILCGSK 374 (717)
Q Consensus 295 ~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~ 374 (717)
++||++++++||||+||+.++++||||+||+|+|++++|+|++++++||+++++|+||+|||+|+||||+|||+||++..
T Consensus 466 ~n~s~~lr~AMCf~~D~~~g~~va~VQ~PQ~F~~i~~~D~y~~~~~~ffd~~~~g~dglqGP~YvGTGC~fRR~ALyG~~ 545 (977)
T PLN02195 466 VNNSKAVREAMCFLMDPVVGRDVCYVQFPQRFDGIDRSDRYANRNVVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYG 545 (977)
T ss_pred cCcHHHHHHHHhhccCcccCCeeEEEcCCcccCCCCCCCCCCcccceeeeeeeccccccCCccccccCceeeehhhhccC
Confidence 99889999999999999989999999999999999999999999999999999999999999999999999999999864
Q ss_pred CCch------------------hhHhh---------hc-----c------------------------------------
Q 005037 375 YNKE------------------TKIEW---------KS-----K------------------------------------ 386 (717)
Q Consensus 375 ~~~~------------------~~~~~---------~~-----~------------------------------------ 386 (717)
+..- .+.++ ++ .
T Consensus 546 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~ 625 (977)
T PLN02195 546 PPSLPRLPKSSSSSSSCCCPTKKKPEQDPSEIYRDAKREDLNAAIFNLREIDNYDEYERSMLISQMSFEKTFGLSSVFIE 625 (977)
T ss_pred ccccccccccccccccccccccccccccchhhccccccccccccccccccccccchhhhhhhhhhhHHHHhhcccHHHHH
Confidence 3210 00000 00 0
Q ss_pred -----CCC-ccchhhhhHHHhhhhcccccccccCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCccccccCCc
Q 005037 387 -----KDS-KGEESLLDLEETSKALASCTYERNTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDAFLGVSPT 460 (717)
Q Consensus 387 -----igg-~~~~~~~~~~~~~~~v~~c~Ye~~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a~~g~aP~ 460 (717)
.++ ......++++++|++|++|+||++|.||+++||.|||+|||+.||++||++||||+||+|.+++|.|+||+
T Consensus 626 S~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rlH~rGWrSvY~~p~r~af~G~AP~ 705 (977)
T PLN02195 626 STLMENGGVPESANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSAPI 705 (977)
T ss_pred HHHHHhcCCCCCCCcHHHHHHHHhhhcccCccccchhhhcCeeccceecHHHHHHHHHccCCcEEecCCccHHhcccCCC
Confidence 000 01112345788999999999999999999999999999999999999999999999999888899999999
Q ss_pred CHHHHHHHHHHHhcchHHHHHhhhcccccc--cCCCchhHHHHHhhhhhhhhHHHHHHHHHHHhhHHHhhCCCccccCch
Q 005037 461 TLLQLLVQHKRWSEGNFQIFISKYCPAWHA--HGKISLGFRLGYCCYGLWAPSCLATLFYSVVPSLYLLKGIPLFPEITS 538 (717)
Q Consensus 461 tl~~~~~Qr~RWa~G~lqil~~~~~pl~~~--~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~ll~g~~~~p~~~~ 538 (717)
|+.+++.||+||++|++||+++++||+++| .++|+++||++|+++++|+++++++++|+++|++||++|++++|.++.
T Consensus 706 ~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~~~QRL~Yl~~~ly~~~slp~liY~~lP~l~Ll~G~~i~P~vs~ 785 (977)
T PLN02195 706 NLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLAYINTIVYPFTSLPLIAYCTLPAICLLTGKFIIPTLSN 785 (977)
T ss_pred CHHHHHHHHHHHHhchhhhhhccCCccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeecccchH
Confidence 999999999999999999999999999865 368999999999999999999999999999999999999999999988
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCccccchhhhhHHHHHHHHhHHHHHHHHHHHHhCCCCCCeeeCccCCcchhhhhh
Q 005037 539 PWIIPFAYVIFAKYGGSLVEFLWCGGTALGWWNDQRLWLYKRTSSYLFAFIDTILKTLGFSESAFVVTAKVADQDVLERY 618 (717)
Q Consensus 539 ~~~lp~~~~~~~~~~~~ll~~~~~g~~~~~ww~~~r~w~i~~~~~~l~~~~~~l~k~lg~~~~~F~VT~K~~~~~~~~~y 618 (717)
+|+++|+++|+++++++++|++|+|+++++|||+||||+|.++++++++++++++|.+|+++++|.||+|..+++.
T Consensus 786 ~~~~~f~~lfl~~~~~~~lE~~~sG~si~~WWrnqq~w~I~~tSa~Lfavl~~llKvLggs~~~F~VTsK~~dd~~---- 861 (977)
T PLN02195 786 LASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTAKAADDTE---- 861 (977)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHcCCCccceeccccccccc----
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999877532
Q ss_pred hcceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCc
Q 005037 619 EKEIMEFGDTSSMFTILSTLALLNLFCLIGAVKRVIIDDGFVKLYETMILQILLCSTLVLINWPLYQGLFLRKDNGKMPS 698 (717)
Q Consensus 619 ~~~~~~f~~~~~l~~p~~~l~~l~l~al~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~P~~~gl~~r~~~~~~p~ 698 (717)
..+.|+|+ |||+|+|++|++++|++|+++|+++.+.+ + ...|+.+++++++|+|+|+++|||++||++|+ ||+|+
T Consensus 862 ~~~~Y~f~-~S~l~iP~ttl~ilNlvaiv~g~~~~i~~-~-~~~~g~l~~~~~~~~wvv~~~~Pf~kgl~gR~--~r~P~ 936 (977)
T PLN02195 862 FGELYMVK-WTTLLIPPTSLLIINLVGVVAGFSDALNK-G-YEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQ--NRTPT 936 (977)
T ss_pred hhcceecc-ceehhHHHHHHHHHHHHHHHHHHHHHHhc-C-cchhhhHHHHHHHHHHHHHHHHHHHHHHhccC--CCCCe
Confidence 12445885 99999999999999999999999999875 3 35799999999999999999999999999998 68899
Q ss_pred hHHHHHHHHHHHHHhhc
Q 005037 699 SLTAKTLVLALVLFGIE 715 (717)
Q Consensus 699 ~~~~~s~~~~~~~~~~~ 715 (717)
+|++||+++++.++.+-
T Consensus 937 ~v~v~s~ll~~~~~l~~ 953 (977)
T PLN02195 937 IVVLWSVLLASVFSLVW 953 (977)
T ss_pred eehHHHHHHHHHHHHHH
Confidence 99999999998777653
No 7
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=100.00 E-value=7.8e-173 Score=1489.15 Aligned_cols=697 Identities=34% Similarity=0.645 Sum_probs=632.8
Q ss_pred CCCCCCceeeeecCcchh--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhccee
Q 005037 3 SDGYLPLFETRRVKGRIF--YRVFVVSVFVCIFFIWVYRLCHIPNKHENGKLLWVWIGLFAAELWLGFYWIFTQSLRWNR 80 (717)
Q Consensus 3 ~~~~~~l~~~~~~~~~~~--~r~~~~~~~~~~~~~~~~R~~~l~~~~~~~~~~~~~~~~~~~E~~~~~~~~l~~~~~~~p 80 (717)
.+.++||+++.+++++.+ ||+++++++++++++++||+++ |+. +++|+|+++++||+||+|+|+++|++||+|
T Consensus 189 ~~~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~-~~~----~a~~~Wl~s~~cE~wFaf~Wll~q~~Kw~P 263 (1044)
T PLN02915 189 AEARQPLWRKVPIPSSKINPYRIVIVLRLVILCFFFRFRILT-PAY----DAYPLWLISVICEIWFALSWILDQFPKWFP 263 (1044)
T ss_pred cccCCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcC-cCC----CchHHHHHHHHHHHHHHHHHHHccCccccc
Confidence 345678999999999876 9999999999999999999998 555 468999999999999999999999999999
Q ss_pred cccccccccccccccC-----CCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHh
Q 005037 81 VRRLTFRDRLSQRYED-----KLPGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEA 155 (717)
Q Consensus 81 ~~r~~~~~~l~~~~~~-----~~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea 155 (717)
++|.+++|||+++++. +||+|||||||+||.||||.+++|||+|+||+|||.|||+|||||||++.+|+|+|.||
T Consensus 264 v~R~t~~drL~~r~e~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EA 343 (1044)
T PLN02915 264 INRETYLDRLSMRFERDGEPNRLAPVDVFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSET 343 (1044)
T ss_pred cccccCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHhHHHHHHHH
Confidence 9999999999987642 39999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccchhhhhhcCCCCCCchhhhhHH---------------------HHHHHHHHHHHhhhc-ccchHHHHHhhcCcc
Q 005037 156 SHFSTHWIPYCKKFNVEPRSPAAYFINR---------------------LYEEMENRIQTATKL-GRITEEIRMKHKGFS 213 (717)
Q Consensus 156 ~~fa~~w~pfc~~~~v~~r~p~~yf~~~---------------------~ye~~~~ri~~~~~~-~~~~~~~~~~~~g~~ 213 (717)
++|||+||||||||+|||||||+||+++ ||||||+|||++++. ++++++.+.+ .+++
T Consensus 344 a~FAk~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~~~~~~~~m-~dgt 422 (1044)
T PLN02915 344 AEFARRWVPFCKKHNIEPRAPEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVM-QDGT 422 (1044)
T ss_pred HHHHHhhcchhhhcCCCcCCHHHHhccCCCccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccc-cCCc
Confidence 9999999999999999999999999873 999999999999965 8999887544 4469
Q ss_pred cccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCC
Q 005037 214 QWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDM 293 (717)
Q Consensus 214 ~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekrp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~ 293 (717)
+|+++.+ +|||+||||++++++ +.|.+|+++|+||||+|||||+++||+||||||+++|+|+++||+|||+++||||
T Consensus 423 ~W~g~~~-~dHp~IIqVll~~~~--~~d~~g~~lP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~iLNlDCDm 499 (1044)
T PLN02915 423 PWPGNNT-RDHPGMIQVYLGSEG--ALDVEGKELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFMLNLDCDH 499 (1044)
T ss_pred cCCCCCC-CCCccceEEeecCCC--CcccccCccceeEEEecccCCCCCcchhhhhhhhHhhhhheeecCcEEEeecccc
Confidence 9997655 899999999999865 3467889999999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhhhhhHHHHHHHHHhhhhccCCcccccccceEehhhhccC
Q 005037 294 YSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELYSNSSRIFNEVELQGLDGYGCPLYTGSGCFHRREILCGS 373 (717)
Q Consensus 294 ~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~ 373 (717)
++|||+++|++||||+||+.++++||||+||+|+|+++||+|+|++++||++.++|+||+|||+|+||||+|||+||++.
T Consensus 500 Y~Nns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gidk~D~Y~n~~~Vffdi~~~GldGlqGP~YvGTGCffrR~aLYG~ 579 (1044)
T PLN02915 500 YINNSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPVYVGTGCVFNRQALYGY 579 (1044)
T ss_pred ccCcchhhHhhceeeecCCCCCeeEEEeCCcccCCCCCCCCcCccceEEEeeecccccccCCcccccCCceeeeeeecCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred CCCch---------hhHhhh----------------------ccC-----------------------------------
Q 005037 374 KYNKE---------TKIEWK----------------------SKK----------------------------------- 387 (717)
Q Consensus 374 ~~~~~---------~~~~~~----------------------~~i----------------------------------- 387 (717)
.+... ...+|. +.+
T Consensus 580 ~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (1044)
T PLN02915 580 DPPVSEKRPKMTCDCWPSWCCCCCGGGRRGKSKKSKKGKKGRRSLLGGLKKRKKKGGGGGSMMGKKYGRKKSQAVFDLEE 659 (1044)
T ss_pred CCcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 54310 000000 000
Q ss_pred ----------------------------------------CC-ccchhhhhHHHhhhhcccccccccCCcCcccccCCCC
Q 005037 388 ----------------------------------------DS-KGEESLLDLEETSKALASCTYERNTQWGKEMGLKYGC 426 (717)
Q Consensus 388 ----------------------------------------gg-~~~~~~~~~~~~~~~v~~c~Ye~~t~wG~~~G~~~~s 426 (717)
++ -.....++++++|++|++|+||++|.||+++||.|||
T Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGS 739 (1044)
T PLN02915 660 IEEGLEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLMEDGGLPEGTNPAALIKEAIHVISCGYEEKTEWGKEIGWIYGS 739 (1044)
T ss_pred cccccccccchhhhhhhhhhhhhhhcCCcHHHHHHHHHhhcCCCCCCCcHHHHHHHHhccccCCCccCchhHhhCccccc
Confidence 00 0011234688999999999999999999999999999
Q ss_pred CcchHHHHHHHHhcCCeEEEeCCCCccccccCCcCHHHHHHHHHHHhcchHHHHHhhhcccccc-cCCCchhHHHHHhhh
Q 005037 427 PAEDVVTGLSIQSRGWKSVYSKPERDAFLGVSPTTLLQLLVQHKRWSEGNFQIFISKYCPAWHA-HGKISLGFRLGYCCY 505 (717)
Q Consensus 427 vtED~~t~~rl~~~Gwrsvy~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~lqil~~~~~pl~~~-~~~l~~~qrl~y~~~ 505 (717)
+|||+.||++||++||||+||+|++++|.|+||+|+.++++||+||++|++||+++++||++++ .++|+++||++|+++
T Consensus 740 vTEDv~TG~rLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lqIf~sr~~Pl~~g~~~~L~l~QRL~Yl~~ 819 (1044)
T PLN02915 740 VTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGKLKWLERLAYINT 819 (1044)
T ss_pred cccHHHHHHHHHccCCcEEeeCCCcHHhcCcCCCCHHHHHHHHHHHhhhHHHHHHhccCCcccccCCCCCHHHHHHHHHH
Confidence 9999999999999999999999888899999999999999999999999999999999999865 368999999999999
Q ss_pred hhhhhHHHHHHHHHHHhhHHHhhCCCccccCchhhHHHHHHHHHHHHHHHHHHHHHhCCccccchhhhhHHHHHHHHhHH
Q 005037 506 GLWAPSCLATLFYSVVPSLYLLKGIPLFPEITSPWIIPFAYVIFAKYGGSLVEFLWCGGTALGWWNDQRLWLYKRTSSYL 585 (717)
Q Consensus 506 ~~~~~~~~~~l~~~~~P~l~ll~g~~~~p~~~~~~~lp~~~~~~~~~~~~ll~~~~~g~~~~~ww~~~r~w~i~~~~~~l 585 (717)
++|++.++++++|+++|++||++|++++|.++..+.+.|+++++++++++++|++|+|.++++|||+||||+|.++++++
T Consensus 820 ~~yp~~slp~liY~llP~l~LLtG~~i~P~~s~~~~~~f~~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~L 899 (1044)
T PLN02915 820 IVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFLALFLSIIATSVLELRWSGVSIEDLWRNEQFWVIGGVSAHL 899 (1044)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcccCccchHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhhHHHHHHHHHHH
Confidence 99999999999999999999999999999876655455566788899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCeeeCccCCcchhhhhhhcceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhHH
Q 005037 586 FAFIDTILKTLGFSESAFVVTAKVADQDVLERYEKEIMEFGDTSSMFTILSTLALLNLFCLIGAVKRVIIDDGFVKLYET 665 (717)
Q Consensus 586 ~~~~~~l~k~lg~~~~~F~VT~K~~~~~~~~~y~~~~~~f~~~~~l~~p~~~l~~l~l~al~~gi~~~~~~~~~~~~~~~ 665 (717)
++++++++|.||+++++|+||+|+.+++..+ .++.|+|+ |+++++|+++++++|++|+++|+++++.+ + ...|+.
T Consensus 900 favl~~iLKvLg~se~~F~VTsK~~d~~~d~--~~ely~F~-~S~l~iP~ttllllNlvalv~Gi~~~i~~-~-~~~~g~ 974 (1044)
T PLN02915 900 FAVFQGLLKVLGGVDTNFTVTSKAADDEADE--FGELYLFK-WTTLLIPPTTLIILNMVGVVAGVSDAINN-G-YGSWGP 974 (1044)
T ss_pred HHHHHHHHHHhcccCCcceecCCccccchhh--hccceeec-ceehHHHHHHHHHHHHHHHHHHHHHHHhc-c-cchhHH
Confidence 9999999999999999999999987654432 25788995 99999999999999999999999999875 2 357899
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHHHHhhc
Q 005037 666 MILQILLCSTLVLINWPLYQGLFLRKDNGKMPSSLTAKTLVLALVLFGIE 715 (717)
Q Consensus 666 ~~~~~~~~~~~v~~~~P~~~gl~~r~~~~~~p~~~~~~s~~~~~~~~~~~ 715 (717)
+++++++++|+|+++|||++||++|+ +|+|++|++||+++|+.++.+-
T Consensus 975 l~~~l~~~~wvvv~lyPf~kgLmgR~--~r~P~~v~v~s~lla~~~~ll~ 1022 (1044)
T PLN02915 975 LFGKLFFAFWVIVHLYPFLKGLMGRQ--NRTPTIVVLWSILLASIFSLVW 1022 (1044)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCC--CCCCeeehHHHHHHHHHHHHHH
Confidence 99999999999999999999999998 6889999999999999777653
No 8
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=1.8e-172 Score=1453.51 Aligned_cols=686 Identities=34% Similarity=0.601 Sum_probs=615.6
Q ss_pred CCCCCceeeeecCcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhcceeccc
Q 005037 4 DGYLPLFETRRVKGRIFYRVFVVSVFVCIFFIWVYRLCHIPNKHENGKLLWVWIGLFAAELWLGFYWIFTQSLRWNRVRR 83 (717)
Q Consensus 4 ~~~~~l~~~~~~~~~~~~r~~~~~~~~~~~~~~~~R~~~l~~~~~~~~~~~~~~~~~~~E~~~~~~~~l~~~~~~~p~~r 83 (717)
..++|||||++++++. +|++.+++++++++|++||+++.++.+ +.|+++++||+||+|+|+++|+.+|+|++|
T Consensus 6 ~~~~pL~~~~~~~~~~-~r~~~~~vl~~~~~~l~~R~~~~~~~~------~~W~~~~~~E~wf~~~WlL~q~~kw~pv~r 78 (756)
T PLN02190 6 SSLPPLCERISHKSYF-LRAVDLTILGLLFSLLLYRILHMSEND------TVWLVAFLCESCFSFVWLLITCIKWSPAEY 78 (756)
T ss_pred CCCCCceeeeeccchh-HHHHHHHHHHHHHHHHHHHHhCCCccc------HHHHHHHHHHHHHHHHHHHhccceeeecCC
Confidence 4567899999999886 999999999999999999999866642 357889999999999999999999999999
Q ss_pred ccccccccccccCCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccch
Q 005037 84 LTFRDRLSQRYEDKLPGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWI 163 (717)
Q Consensus 84 ~~~~~~l~~~~~~~~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~ 163 (717)
.++|++|+++++ ++|+||||||||||.||||++|+|||+|+||+|||+||++|||+|||++++|+|+|.||++|||+|+
T Consensus 79 ~~~p~~l~~r~~-~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~EAa~FA~~Wv 157 (756)
T PLN02190 79 KPYPDRLDERVH-DLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWV 157 (756)
T ss_pred CCCcHHHHHhhc-cCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHHHHHHHhhhc
Confidence 999999999875 5999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCCchhhhhHH------------------HHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCc
Q 005037 164 PYCKKFNVEPRSPAAYFINR------------------LYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHD 225 (717)
Q Consensus 164 pfc~~~~v~~r~p~~yf~~~------------------~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~ 225 (717)
||||||||||||||+||+++ ||||||+||+++++ +....+. ++.+..|. +++++|||
T Consensus 158 PFCrK~~IepRaPe~YF~~~~~~~~~~~f~~e~~~~K~eYee~k~ri~~a~~-~~~~~~~---~~~~~~~~-~~~~~dH~ 232 (756)
T PLN02190 158 PFCKKYNVRVRAPFRYFLNPPVATEDSEFSKDWEMTKREYEKLSRKVEDATG-DSHWLDA---EDDFEAFS-NTKPNDHS 232 (756)
T ss_pred ccccccCCCcCCHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhhcc-CCCCccc---CCcccccC-CCCCCCCc
Confidence 99999999999999999852 99999999999752 2222211 11244554 58899999
Q ss_pred cceeeeecCCCCCccccccCCCCeEEEEeeccCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHH
Q 005037 226 TILQILIDGRDPNAVDNERCALPTLVYLAREKRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDAL 305 (717)
Q Consensus 226 ~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekrp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v 305 (717)
+||||++++++. +.+|+++|+||||+|||||+++||+||||||+++|+|+.+||+|||+++||||++|||++++++|
T Consensus 233 ~iiqVll~~~~~---~~~~~~lP~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r~Am 309 (756)
T PLN02190 233 TIVKVVWENKGG---VGDEKEVPHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAM 309 (756)
T ss_pred cceEEEecCCCC---ccccccCceEEEEeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCccccCchhHHHHhh
Confidence 999999998543 34688999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCCC-CeEEEEeccceeccCCcchhhhhhHHHHHHHHHhhhhccCCcccccccceEehhhhccCCCCchh-----
Q 005037 306 CFFIDEEKG-HEVAFVQFPQNFDNVTKNELYSNSSRIFNEVELQGLDGYGCPLYTGSGCFHRREILCGSKYNKET----- 379 (717)
Q Consensus 306 ~~f~d~~~~-~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~----- 379 (717)
|||+|++.+ +++||||+||+|+ |+|+|++++||++.++|+||+|||+|+||||+|||+||++.++++-.
T Consensus 310 Cf~ld~~~~~~~~~fVQfPQ~F~-----D~y~n~~~v~f~~~~~GldGlqGP~YvGTGCffrR~alyG~~p~~~~~~~~~ 384 (756)
T PLN02190 310 CIFLQKSKNSNHCAFVQFPQEFY-----DSNTNELTVLQSYLGRGIAGIQGPIYIGSGCFHTRRVMYGLSSDDLEDDGSL 384 (756)
T ss_pred hhhcCCCCCCCeeEEEeCchhhc-----cccCccceEEEEEeeccccccCCcccccCCcceEeeeecCCCcccccccccc
Confidence 999998644 5899999999997 57999999999999999999999999999999999999996432100
Q ss_pred --------hHhhh--ccCCC----------------ccchhhhhHHHhhhhcccccccccCCcCcccccCCCCCcchHHH
Q 005037 380 --------KIEWK--SKKDS----------------KGEESLLDLEETSKALASCTYERNTQWGKEMGLKYGCPAEDVVT 433 (717)
Q Consensus 380 --------~~~~~--~~igg----------------~~~~~~~~~~~~~~~v~~c~Ye~~t~wG~~~G~~~~svtED~~t 433 (717)
..++. +..|. -....+++++|+|++|++|+||++|.||+|+||.|||+|||+.|
T Consensus 385 ~~~~~~~~~~~~~~~~~fg~s~~f~~s~~~~~~~~~~~~~~~~~~~~eA~~V~sC~YE~~T~WG~evG~~ygSitED~~T 464 (756)
T PLN02190 385 SSVATREFLAEDSLAREFGNSKEMVKSVVDALQRKPNPQNSLTNSIEAAQEVGHCHYEYQTSWGNTIGWLYDSVAEDLNT 464 (756)
T ss_pred cccccccccchhhhhhhcCCcHHHHHHHHHHhccCCCCccchHHHHHHHHhhcccCCCCCCchhhccCcccceeechHHH
Confidence 00000 11111 11223567899999999999999999999999999999999999
Q ss_pred HHHHHhcCCeEEEeCCCCccccccCCcCHHHHHHHHHHHhcchHHHHHhhhcccccc-cCCCchhHHHHHhhhhhhhhHH
Q 005037 434 GLSIQSRGWKSVYSKPERDAFLGVSPTTLLQLLVQHKRWSEGNFQIFISKYCPAWHA-HGKISLGFRLGYCCYGLWAPSC 512 (717)
Q Consensus 434 ~~rl~~~Gwrsvy~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~lqil~~~~~pl~~~-~~~l~~~qrl~y~~~~~~~~~~ 512 (717)
|++||++||||+||+|++++|.|.+|+++.+.+.||+||++|++||+++|+||++.+ .++|+++||++|++..+ |+++
T Consensus 465 Gl~mh~rGWrSvY~~p~~~AFlG~aP~~l~~~L~Q~~RWa~G~lqI~fsr~nPl~~g~~~~L~l~QRLaYl~~~~-~~~s 543 (756)
T PLN02190 465 SIGIHSRGWTSSYISPDPPAFLGSMPPGGPEAMVQQRRWATGLIEVLFNKQSPLIGMFCRKIRFRQRLAYLYVFT-CLRS 543 (756)
T ss_pred HHHHHccCCceEecCCCchhhcCcCCCChHHHhhhhhhHhhhhHHHHHhcCCCceeccCCCCCHHHHHHHHHHHH-HHHH
Confidence 999999999999999888999999999999999999999999999999999999865 57899999999999877 9999
Q ss_pred HHHHHHHHHhhHHHhhCCCccccCchhhHHHHHHHHHHHHHHHHHHHHHhCCccccchhhhhHHHHHHHHhHHHHHHHHH
Q 005037 513 LATLFYSVVPSLYLLKGIPLFPEITSPWIIPFAYVIFAKYGGSLVEFLWCGGTALGWWNDQRLWLYKRTSSYLFAFIDTI 592 (717)
Q Consensus 513 ~~~l~~~~~P~l~ll~g~~~~p~~~~~~~lp~~~~~~~~~~~~ll~~~~~g~~~~~ww~~~r~w~i~~~~~~l~~~~~~l 592 (717)
+++++|+++|++||++|++++|+. +|+.+++++++++++++++|++|+|+++++||||||||+|+++++|++|+++++
T Consensus 544 ip~l~Y~~lP~l~Ll~g~~i~P~~--~~~~~~~~l~~~~~~~~l~E~~~sG~s~~~WWnnqr~w~I~~~sa~l~a~~~~~ 621 (756)
T PLN02190 544 IPELIYCLLPAYCLLHNSALFPKG--VYLGIIVTLVGMHCLYTLWEFMSLGFSVQSWYVSQSFWRIKATSSWLFSIQDII 621 (756)
T ss_pred HHHHHHHHHHHHHHHcCCccccCc--cHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHhhhheEEeecchHHHHHHHHHH
Confidence 999999999999999999999965 578888888899999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCeeeCccCCc-------------chhhhhhhcceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHhcc-c
Q 005037 593 LKTLGFSESAFVVTAKVAD-------------QDVLERYEKEIMEFGDTSSMFTILSTLALLNLFCLIGAVKRVIIDD-G 658 (717)
Q Consensus 593 ~k~lg~~~~~F~VT~K~~~-------------~~~~~~y~~~~~~f~~~~~l~~p~~~l~~l~l~al~~gi~~~~~~~-~ 658 (717)
+|.||+++++|+||+|..+ +++.++|++|+|+|+ +||+|+|.+|++++|++|+++|+++++.+. +
T Consensus 622 lK~lg~s~~~F~vTsK~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~-~S~lfiP~tti~~~Nl~a~~~g~~~~~~~~~s 700 (756)
T PLN02190 622 LKLLGISKTVFIVTKKTMPETKSGSGSGPSQGEDDGPNSDSGKFEFD-GSLYFLPGTFIVLVNLAALAGFLVGLQRSSYS 700 (756)
T ss_pred HHHhccccceEEEeeccccccccccccccccccccchhhhcceeEec-ceehHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 9999999999999999754 344578999999996 999999999999999999999998876431 0
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHHHHhhcc
Q 005037 659 FVKLYETMILQILLCSTLVLINWPLYQGLFLRKDNGKMPSSLTAKTLVLALVLFGIEV 716 (717)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~v~~~~P~~~gl~~r~~~~~~p~~~~~~s~~~~~~~~~~~~ 716 (717)
.++.|+++ +|+++|+|+|+++|||+|||+ |||||+||+||+++|++|+++|+++++
T Consensus 701 ~~~~~~~l-~q~~~~~~vv~~~~P~~~gl~-~kdkg~iP~s~~~~s~~l~~~f~~~~~ 756 (756)
T PLN02190 701 HGGGGSGL-AEACGCILVVMLFLPFLKGLF-EKGKYGIPLSTLSKAAFLAVLFVVFSV 756 (756)
T ss_pred cCcccccH-HHHHHHHHHHHHHHHHHHHHh-cCCCCCCChhHHHHHHHHHHHHHhccC
Confidence 12356665 999999999999999999999 999999999999999999999999875
No 9
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=4.1e-171 Score=1475.99 Aligned_cols=697 Identities=32% Similarity=0.612 Sum_probs=623.2
Q ss_pred CCCCCceeeeecCcchh--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhcceec
Q 005037 4 DGYLPLFETRRVKGRIF--YRVFVVSVFVCIFFIWVYRLCHIPNKHENGKLLWVWIGLFAAELWLGFYWIFTQSLRWNRV 81 (717)
Q Consensus 4 ~~~~~l~~~~~~~~~~~--~r~~~~~~~~~~~~~~~~R~~~l~~~~~~~~~~~~~~~~~~~E~~~~~~~~l~~~~~~~p~ 81 (717)
+.++||++|.++++..+ ||+++++++++++++++||+++ |+. ++.|+|+++++||+||+|+|+++|++||+|+
T Consensus 265 ~~~~pL~~~~~i~~~il~pyRl~~~~rlv~l~~fl~~Ri~~-~~~----~~~~~W~~s~~cE~WFaf~Wll~q~~Kw~Pv 339 (1135)
T PLN02248 265 KPWRPLTRKVKISAAILSPYRLLILIRLVVLGLFLTWRVRN-PNE----DAMWLWGMSVVCEIWFAFSWLLDQLPKLCPI 339 (1135)
T ss_pred cCCCCceeeeecCcccccHHHHHHHHHHHHHHHHHHHHhcC-CCC----cchHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 34578999999999876 9999999999999999999998 554 4689999999999999999999999999999
Q ss_pred cccccccccccccc----------CCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHH
Q 005037 82 RRLTFRDRLSQRYE----------DKLPGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYA 151 (717)
Q Consensus 82 ~r~~~~~~l~~~~~----------~~~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~ 151 (717)
+|.+++++|+++++ .+||+|||||||+||+||||.+++|||+|+||+|||.|||.|||||||++.+|+|+
T Consensus 340 ~R~t~~~rL~~r~e~~~~~~p~g~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKLacYvSDDGgS~LTf~A 419 (1135)
T PLN02248 340 NRATDLAVLKEKFETPSPSNPTGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLTFEA 419 (1135)
T ss_pred ccccCHHHHHHHhccccccCCCCcccCCcceeEeecCCCccCcchHHHHHHHHHhcccccccceeEEEecCCchHHHHHH
Confidence 99999999998875 36999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccccchhhhhhcCCCCCCchhhhhHH---------------------HHHHHHHHHHHhhhcccch-------H
Q 005037 152 LMEASHFSTHWIPYCKKFNVEPRSPAAYFINR---------------------LYEEMENRIQTATKLGRIT-------E 203 (717)
Q Consensus 152 l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~~---------------------~ye~~~~ri~~~~~~~~~~-------~ 203 (717)
|.||++|||+||||||||+|||||||+||+++ ||||||+|||.+++.++.. +
T Consensus 420 L~EAa~FA~~WVPFCrKh~IepRaPe~YFs~~~~~~~~~~~~~F~~d~r~~KreYee~K~RIe~l~~~~~~rs~~~n~~~ 499 (1135)
T PLN02248 420 MAEAASFARIWVPFCRKHDIEPRNPESYFSLKRDPTKNKVRPDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAYNARE 499 (1135)
T ss_pred HHHHHHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCccchhHHHHHHHHHHHHHHHHHHHHhhhhhccccccccchhH
Confidence 99999999999999999999999999999863 9999999999998755444 4
Q ss_pred HHHHh---hc--Cc-----------------ccccC-------CCCCCCCccceeeeecCCC----------CCcccc--
Q 005037 204 EIRMK---HK--GF-----------------SQWDS-------YSSPLDHDTILQILIDGRD----------PNAVDN-- 242 (717)
Q Consensus 204 ~~~~~---~~--g~-----------------~~w~~-------~~~~~~h~~iv~v~~~~~~----------~~~~d~-- 242 (717)
|...+ ++ |+ ++|++ +++++|||+||||++++++ .++.|.
T Consensus 500 e~~~~~~~~~~~~~~~~e~~~~~~~~wm~dgt~wpg~W~~~~~~~~~~dH~~IIqVll~~p~~e~~~g~~~~~~~~d~~~ 579 (1135)
T PLN02248 500 EIKAKKKQRESGGGDPSEPLKVPKATWMADGTHWPGTWLSSAPDHSRGDHAGIIQVMLKPPSDEPLMGSADDENLIDFTD 579 (1135)
T ss_pred HHHhhhhhhhhcccccccccccccceeeccCCcCCCcccCcccCCCCCCCcceeEEeccCCCcccccCcccccccccccc
Confidence 43321 11 22 55654 4789999999999998654 223343
Q ss_pred ccCCCCeEEEEeeccCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEec
Q 005037 243 ERCALPTLVYLAREKRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQF 322 (717)
Q Consensus 243 ~g~~~P~l~yv~Rekrp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~ 322 (717)
.|.++|+||||+|||||+++||+||||||+++|+|+.+||||||+++||||++|||++++++||||+|++ ++++||||+
T Consensus 580 ~d~~lP~LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPfILNLDCDmYiNns~alr~AMCf~lD~~-g~~vAfVQF 658 (1135)
T PLN02248 580 VDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFMMDRG-GDRICYVQF 658 (1135)
T ss_pred cccccceeEEEecccCCCCCcccccchhhhHHHhhhhccCCCeEEEeccCcccCCchhHHhcchheecCC-CCceEEEcC
Confidence 3458999999999999999999999999999999999999999999999999999999999999999996 889999999
Q ss_pred cceeccCCcchhhhhhHHHHHHHHHhhhhccCCcccccccceEehhhhccCCCCch---------------hhHhhh---
Q 005037 323 PQNFDNVTKNELYSNSSRIFNEVELQGLDGYGCPLYTGSGCFHRREILCGSKYNKE---------------TKIEWK--- 384 (717)
Q Consensus 323 Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~---------------~~~~~~--- 384 (717)
||+|+|++++|+|+|+.++||+++++|+||+|||+||||||+|||+||++..+... .++++.
T Consensus 659 PQrF~~I~k~D~Ygn~~~Vffdi~~~GlDGlqGP~YvGTGCffRR~ALYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (1135)
T PLN02248 659 PQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPRAKEHSGCFGSCKFTKKKKKETSASE 738 (1135)
T ss_pred CcccCCCCCCCccCCcceeeeeeeeccccccCCccccccCceeeehhhcCcCCccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999998644211 000000
Q ss_pred -------------------ccCC----------------C-c------------------cchhhhhHHHhhhhcccccc
Q 005037 385 -------------------SKKD----------------S-K------------------GEESLLDLEETSKALASCTY 410 (717)
Q Consensus 385 -------------------~~ig----------------g-~------------------~~~~~~~~~~~~~~v~~c~Y 410 (717)
+..| . . .+...++++++|++|++|.|
T Consensus 739 ~~~~~~~~~~~~~~~~~~~~rfG~S~~fi~S~~~a~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~eA~~V~sC~Y 818 (1135)
T PLN02248 739 PEEQPDLEDDDDLELSLLPKRFGNSTMFAASIPVAEFQGRPLADHPSVKNGRPPGALTVPREPLDAATVAEAISVISCWY 818 (1135)
T ss_pred ccccccccccchhhhhhhhhhhccchhhhhhhHHHhhcccccccccccccccccccccccccCCcHHHHHHHHhhccccc
Confidence 0000 0 0 00112457889999999999
Q ss_pred cccCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCccccccCCcCHHHHHHHHHHHhcchHHHHHhhhcccccc
Q 005037 411 ERNTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDAFLGVSPTTLLQLLVQHKRWSEGNFQIFISKYCPAWHA 490 (717)
Q Consensus 411 e~~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~lqil~~~~~pl~~~ 490 (717)
|++|.||+++||.|||+|||+.||++||++||||+||++++++|.|+||+|+.++++||+||++|++||++++++|++.+
T Consensus 819 E~~T~WG~evG~~YGSvTEDv~TGlrLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIf~sr~~Pll~~ 898 (1135)
T PLN02248 819 EDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAS 898 (1135)
T ss_pred ccCCchhhhcCeeecceechHHHHHHHHhcCCceEeCCCChHhhcCCCCCCHHHHHHHHHHHhhchHHHHhccCCccccC
Confidence 99999999999999999999999999999999999998888999999999999999999999999999999999998764
Q ss_pred cCCCchhHHHHHhhhhhhhhHHHHHHHHHHHhhHHHhhCCCccccCchhhHHHHHH-HHHHHHHHHHHHHHHhCCccccc
Q 005037 491 HGKISLGFRLGYCCYGLWAPSCLATLFYSVVPSLYLLKGIPLFPEITSPWIIPFAY-VIFAKYGGSLVEFLWCGGTALGW 569 (717)
Q Consensus 491 ~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~ll~g~~~~p~~~~~~~lp~~~-~~~~~~~~~ll~~~~~g~~~~~w 569 (717)
++|++.||++|+++++||+.++++++|+++|++||++|++++|+. .++|+++++ ++++++++.++|++|+|.+.++|
T Consensus 899 -~~Lsl~QRL~Yl~~~lypf~Slp~liY~llP~l~LLtGi~~~p~~-~~~fl~yll~l~l~~~~~sllE~~wsGvsl~~W 976 (1135)
T PLN02248 899 -RRLKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTL-NVTFLVYLLIITITLCLLAVLEIKWSGITLEEW 976 (1135)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccc-cHHHHHHHHHHHHHHHHHHHHHHhhccccHHHH
Confidence 689999999999999999999999999999999999999999986 456666664 45778899999999999999999
Q ss_pred hhhhhHHHHHHHHhHHHHHHHHHHHHhCCCCCCeeeCccCCcchhhhhhhcceeeecccchhHHHHHHHHHHHHHHHHHH
Q 005037 570 WNDQRLWLYKRTSSYLFAFIDTILKTLGFSESAFVVTAKVADQDVLERYEKEIMEFGDTSSMFTILSTLALLNLFCLIGA 649 (717)
Q Consensus 570 w~~~r~w~i~~~~~~l~~~~~~l~k~lg~~~~~F~VT~K~~~~~~~~~y~~~~~~f~~~~~l~~p~~~l~~l~l~al~~g 649 (717)
||+||||+|.++++|+++++++++|.+|+++++|+||+|+.+++..++| +|.|+|+ ++++++|+++++++|++|+++|
T Consensus 977 WrnQq~W~I~~tSA~L~A~l~aiLKvLggs~~~F~VTsK~~~~d~~~~~-a~ly~f~-wS~L~iP~ttl~llNLvAivvG 1054 (1135)
T PLN02248 977 WRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSAGDDEDDEF-ADLYIVK-WTSLMIPPITIMMVNLIAIAVG 1054 (1135)
T ss_pred hhhhheeeehhhHHHHHHHHHHHHHHhcCccccceeCCccccccccccc-chheecC-cchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999887766778 6899995 9999999999999999999999
Q ss_pred HHHHHhcccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHHHHhh
Q 005037 650 VKRVIIDDGFVKLYETMILQILLCSTLVLINWPLYQGLFLRKDNGKMPSSLTAKTLVLALVLFGI 714 (717)
Q Consensus 650 i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~P~~~gl~~r~~~~~~p~~~~~~s~~~~~~~~~~ 714 (717)
++|++.+ + ...|+.+++++++++|+|+++|||++||++| +||+|++|++||+++++.++.+
T Consensus 1055 v~R~i~g-~-~~~~~~l~g~l~~s~Wvv~~lyPf~kGL~gR--~gr~P~iv~v~s~ll~~~~sll 1115 (1135)
T PLN02248 1055 VSRTIYS-E-IPQWSKLLGGVFFSFWVLAHLYPFAKGLMGR--RGRTPTIVYVWSGLLSITISLL 1115 (1135)
T ss_pred HHHHHhc-c-CcchhhhHHHHHHHHHHHHHHHHHHHHHhcc--CCCCCeehHHHHHHHHHHHHHH
Confidence 9999875 2 2468899999999999999999999999999 6788999999999998876655
No 10
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=100.00 E-value=6.3e-158 Score=1332.35 Aligned_cols=605 Identities=44% Similarity=0.808 Sum_probs=557.3
Q ss_pred eEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCchhhh
Q 005037 101 VDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPAAYF 180 (717)
Q Consensus 101 VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf 180 (717)
|||||||+||.||||.+++|||+|+||+|||.|||+|||+|||++++|+|+|.||++|||+|+||||||+|||||||+||
T Consensus 1 vDvFv~TaDP~~EPp~~~~nTvLS~lA~dYP~~kls~YvSDDg~s~ltf~al~Ea~~FA~~WvPFCkk~~ie~R~P~~YF 80 (720)
T PF03552_consen 1 VDVFVCTADPEKEPPLVTANTVLSILAYDYPVEKLSCYVSDDGGSMLTFYALMEAAKFAKHWVPFCKKYNIEPRAPEAYF 80 (720)
T ss_pred CceEEecCCCCcCCCeeeHHHHHHHHhhcCCccceeEEEecCCchHHHHHHHHHHHHHHhhhcchhhccCCccCCHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHH---------------------HHHHHHHHHHHhhh-cccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCC
Q 005037 181 INR---------------------LYEEMENRIQTATK-LGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPN 238 (717)
Q Consensus 181 ~~~---------------------~ye~~~~ri~~~~~-~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~ 238 (717)
+++ +|||||.|||.+++ .++++++.+.+++| ++|++ .+++|||+||||++++++
T Consensus 81 ~~~~~~~~~~~~~~f~~e~~~~k~~ye~~k~ri~~~~~~~~~~~~~~~~~~~~-~~w~~-~~~~dH~~iiqv~~~~~~-- 156 (720)
T PF03552_consen 81 SSKIDPLKDKVQPEFVKERRAMKREYEEFKVRIEALVAKIQKVPEEGWTMQDG-TPWPG-NTRRDHPGIIQVLLDNPG-- 156 (720)
T ss_pred ccCCCcccCCcChhHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccceeccCC-CcCCC-CCCcCChhheEeeccCCC--
Confidence 964 99999999999875 56788888877777 89985 699999999999999875
Q ss_pred ccccccCCCCeEEEEeeccCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEE
Q 005037 239 AVDNERCALPTLVYLAREKRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVA 318 (717)
Q Consensus 239 ~~d~~g~~~P~l~yv~Rekrp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg 318 (717)
+.|.+|+++|+||||+|||||+++||+||||||+++|+|+.++|||||+++||||++|||+.++++||||+||+.++++|
T Consensus 157 ~~~~~g~~lP~lvYvsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~~g~~~~ 236 (720)
T PF03552_consen 157 GKDVDGNELPMLVYVSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPKIGKKIA 236 (720)
T ss_pred CcccccCcCCeEEEEeccCCCCCCchhhhcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccCCCCCeeE
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccceeccCCcchhhhhhHHHHHHHHHhhhhccCCcccccccceEehhhhccCCCCchhhHh----------------
Q 005037 319 FVQFPQNFDNVTKNELYSNSSRIFNEVELQGLDGYGCPLYTGSGCFHRREILCGSKYNKETKIE---------------- 382 (717)
Q Consensus 319 ~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~---------------- 382 (717)
|||+||+|+|+++||+|+|+.++||+++++|+||++||+|+||||+|||+||++.+++...++.
T Consensus 237 ~vQfpq~f~~i~~~d~y~~~~~~~~~~~~~g~dG~~gp~y~Gtgc~~rR~al~g~~~~~~~~~~~~~~~~~~~c~~~~k~ 316 (720)
T PF03552_consen 237 FVQFPQRFDGIDKNDRYGNQNRVFFDINMRGLDGLQGPFYVGTGCFFRREALYGFDPPRYEKDPEKTCCCCSCCFGRRKK 316 (720)
T ss_pred EEeCCceeCCCCcCCCCCccceeeeeccccccccCCCceeeecCcceechhhhCCCCCchhcccCcceeeeecccCCccc
Confidence 9999999999999999999999999999999999999999999999999999997554211100
Q ss_pred h-------h----c-----c------C--------------------------------------CCc-cchhhhhHHHh
Q 005037 383 W-------K----S-----K------K--------------------------------------DSK-GEESLLDLEET 401 (717)
Q Consensus 383 ~-------~----~-----~------i--------------------------------------gg~-~~~~~~~~~~~ 401 (717)
. . + . + |+. ...+.++++++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~~~~~~~~~~~L~E 396 (720)
T PF03552_consen 317 KKSKKKPKKRASKRRESSSPIFALEDIEEGAEGSDEERSSLMSQKELEKKFGQSPEFIASTLMAQGGVPRSPSPASLLEE 396 (720)
T ss_pred ccccccchhccccccccccccccccccccccccchhhhhhcchhHHHHHHhcCCHHHHHHHHHHhcCCCCCCChHHHHHH
Confidence 0 0 0 0 0 000 11123456689
Q ss_pred hhhcccccccccCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCccccccCCcCHHHHHHHHHHHhcchHHHHH
Q 005037 402 SKALASCTYERNTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDAFLGVSPTTLLQLLVQHKRWSEGNFQIFI 481 (717)
Q Consensus 402 ~~~v~~c~Ye~~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~lqil~ 481 (717)
|++|++|.||++|.||+|+||.|||+|||+.||++||++||||+||+|+++||.|.||+|+.+.+.|++||+.|++||++
T Consensus 397 A~~V~sC~YE~~T~WGkevGwiYGSvtEDv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI~f 476 (720)
T PF03552_consen 397 AIHVASCGYEDKTEWGKEVGWIYGSVTEDVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEIFF 476 (720)
T ss_pred HHHHhcCCccccCCcccccceEEEecccccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEeeeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccccc-cCCCchhHHHHHhhhhhhhhHHHHHHHHHHHhhHHHhhCCCccccCchhhHHHHHHHHHHHHHHHHHHHH
Q 005037 482 SKYCPAWHA-HGKISLGFRLGYCCYGLWAPSCLATLFYSVVPSLYLLKGIPLFPEITSPWIIPFAYVIFAKYGGSLVEFL 560 (717)
Q Consensus 482 ~~~~pl~~~-~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~ll~g~~~~p~~~~~~~lp~~~~~~~~~~~~ll~~~ 560 (717)
+||||+++| .++|+++||++|++.++|+++|+|.++|+++|++||++|++++|+++.+|+++|+++++++++++++|++
T Consensus 477 Sr~~Pl~~g~~~rL~~lQrLaY~~~~~ypl~Sipll~Y~~lPalcLLtG~~i~Pk~s~~~~~~f~~lf~~~~~~~llE~~ 556 (720)
T PF03552_consen 477 SRHCPLWYGYGGRLKFLQRLAYLNYMLYPLTSIPLLCYCFLPALCLLTGIFIFPKVSSPWFIYFLALFVSIYAYSLLEFR 556 (720)
T ss_pred hcCCchhccCCCCCcHHHHHHHHHHhhhHHHHHHHHHHHHhHHHHhhCCCcccCccccchhHHHHHHHHHHHHHHHHHHH
Confidence 999999987 6789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCccccchhhhhHHHHHHHHhHHHHHHHHHHHHhCCCCCCeeeCccCCcchhhhhhhcceeeecccchhHHHHHHHHH
Q 005037 561 WCGGTALGWWNDQRLWLYKRTSSYLFAFIDTILKTLGFSESAFVVTAKVADQDVLERYEKEIMEFGDTSSMFTILSTLAL 640 (717)
Q Consensus 561 ~~g~~~~~ww~~~r~w~i~~~~~~l~~~~~~l~k~lg~~~~~F~VT~K~~~~~~~~~y~~~~~~f~~~~~l~~p~~~l~~ 640 (717)
|+|.++++|||+||||+|.++++|++|++++++|.+|+++++|.||+|+.++++.+.+ |.|+| .++++|+|++|+++
T Consensus 557 wsG~si~~WWrnQq~W~I~~tSa~LfAvl~~iLK~lg~s~t~F~VTsK~~dde~~~~~--ely~f-~wS~LfiP~tTlli 633 (720)
T PF03552_consen 557 WSGVSIREWWRNQQFWMIGGTSAHLFAVLQGILKVLGGSETSFTVTSKVSDDEDDKYA--ELYIF-KWSPLFIPPTTLLI 633 (720)
T ss_pred hccCcHHHhhcccceeeehhhHHHHHHHHHHHHHHHcCCccceeeccccccccccccc--ccccc-cccchhhHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999875543333 46777 47899999999999
Q ss_pred HHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHHHHhhcc
Q 005037 641 LNLFCLIGAVKRVIIDDGFVKLYETMILQILLCSTLVLINWPLYQGLFLRKDNGKMPSSLTAKTLVLALVLFGIEV 716 (717)
Q Consensus 641 l~l~al~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~P~~~gl~~r~~~~~~p~~~~~~s~~~~~~~~~~~~ 716 (717)
+|++|+++|+++.+.+ + ...|+.+++|+|+++|+|+++|||+|||++|+| |+|++|++||++||+++|.+-+
T Consensus 634 lNLva~v~Gi~r~i~~-g-~~~~g~l~g~lf~~~wVvv~lyPf~kGL~~R~~--r~P~~v~v~S~lla~i~~llwv 705 (720)
T PF03552_consen 634 LNLVAFVVGISRAINS-G-YGSWGPLLGQLFFSFWVVVHLYPFLKGLFGRKD--RIPTSVIVWSVLLASIFSLLWV 705 (720)
T ss_pred HHHHHHHHHHHHHhcc-C-CCchhHHHHHHHHHHHHHHHhhHHHHhhhcccC--CcceeehHHHHHHHHHHHHHhe
Confidence 9999999999999875 2 357999999999999999999999999999986 5999999999999999988643
No 11
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=100.00 E-value=1.7e-69 Score=635.79 Aligned_cols=489 Identities=22% Similarity=0.269 Sum_probs=383.1
Q ss_pred HHHHH-HHHHHHHHHHHHHHhc-ccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhcceecccccccccccccccCCC
Q 005037 21 YRVFV-VSVFVCIFFIWVYRLC-HIPNKHENGKLLWVWIGLFAAELWLGFYWIFTQSLRWNRVRRLTFRDRLSQRYEDKL 98 (717)
Q Consensus 21 ~r~~~-~~~~~~~~~~~~~R~~-~l~~~~~~~~~~~~~~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~~~ 98 (717)
.|++. ++.+++.+.|++||++ +++..+ +. +.++.++++++|+++.+..++..+....|..|++.+ ++. .++.+
T Consensus 185 ~~~~l~~l~~~~~~rY~~WR~~~tL~~~~-~~-~~~~~~~ll~ae~~~~~~~~lg~~~~~~~~~r~~~~--~~~-~~~~~ 259 (852)
T PRK11498 185 SALMLIVLSLTVSCRYIWWRYTSTLNWDD-PV-SLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPVP--LPK-DMSLW 259 (852)
T ss_pred HHHHHHHHHHHHHHHHHHHHHheeeCCCc-hH-HHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCC--CCc-ccCCC
Confidence 34444 4455556789999999 565432 22 356678899999998877777666666677775422 222 24568
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCchh
Q 005037 99 PGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPAA 178 (717)
Q Consensus 99 P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~ 178 (717)
|+|||+||||| |+++++++|+.+++++|||++|++|||+|||++|.|.+ +|+++
T Consensus 260 P~VsViIPtYN---E~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t~~--------------la~~~--------- 313 (852)
T PRK11498 260 PTVDIFVPTYN---EDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQ--------------FAQEV--------- 313 (852)
T ss_pred CcEEEEEecCC---CcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHHHH--------------HHHHC---------
Confidence 99999999999 88789999999999999999999999999999997632 22221
Q ss_pred hhhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccC
Q 005037 179 YFINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKR 258 (717)
Q Consensus 179 yf~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekr 258 (717)
.+.|++|+++
T Consensus 314 ----------------------------------------------------------------------~v~yI~R~~n 323 (852)
T PRK11498 314 ----------------------------------------------------------------------GVKYIARPTH 323 (852)
T ss_pred ----------------------------------------------------------------------CcEEEEeCCC
Confidence 1678888654
Q ss_pred CCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHh-hccCCCCeEEEEeccceeccCCcch----
Q 005037 259 PWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFF-IDEEKGHEVAFVQFPQNFDNVTKNE---- 333 (717)
Q Consensus 259 p~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f-~d~~~~~~vg~VQ~Pq~f~n~~~~d---- 333 (717)
.|+||||+|+|+++ ++||||+++|||++++ ||+|++++++| .|| ++|+||+||.|+|.++..
T Consensus 324 ----~~gKAGnLN~aL~~----a~GEyIavlDAD~ip~-pdfL~~~V~~f~~dP----~VglVQtp~~f~n~dp~~rnl~ 390 (852)
T PRK11498 324 ----EHAKAGNINNALKY----AKGEFVAIFDCDHVPT-RSFLQMTMGWFLKDK----KLAMMQTPHHFFSPDPFERNLG 390 (852)
T ss_pred ----CcchHHHHHHHHHh----CCCCEEEEECCCCCCC-hHHHHHHHHHHHhCC----CeEEEEcceeccCCchHHHhhH
Confidence 58999999999998 6999999999999997 99999999886 565 799999999998865321
Q ss_pred ---hhhhhHHHHHHHHHhhhhccCCcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccc
Q 005037 334 ---LYSNSSRIFNEVELQGLDGYGCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTY 410 (717)
Q Consensus 334 ---~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Y 410 (717)
...++...||+.++.|.+.+++.++||+++++||+++++ +|
T Consensus 391 ~~~~~~~e~~~fy~~iq~g~~~~~a~~~~Gs~aviRReaLee--------------VG---------------------- 434 (852)
T PRK11498 391 RFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLDE--------------IG---------------------- 434 (852)
T ss_pred HHhhcccchhHHHHHHHhHHHhhcccccccceeeeEHHHHHH--------------hc----------------------
Confidence 123455678999999999999999999999999999998 65
Q ss_pred cccCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCccccccCCcCHHHHHHHHHHHhcchHHHHHhhhcccccc
Q 005037 411 ERNTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDAFLGVSPTTLLQLLVQHKRWSEGNFQIFISKYCPAWHA 490 (717)
Q Consensus 411 e~~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~lqil~~~~~pl~~~ 490 (717)
||++++++||+++++++|++||+++|+++. .+ .|++|+|+.++++||.||++|++|+++. ++|++
T Consensus 435 ----------Gfd~~titED~dlslRL~~~Gyrv~yl~~~-~a-~glaPesl~~~~~QR~RWarG~lQi~r~-~~pl~-- 499 (852)
T PRK11498 435 ----------GIAVETVTEDAHTSLRLHRRGYTSAYMRIP-QA-AGLATESLSAHIGQRIRWARGMVQIFRL-DNPLT-- 499 (852)
T ss_pred ----------CCCCCccCccHHHHHHHHHcCCEEEEEecc-ce-eEECCCCHHHHHHHHHHHHHHHHHHHHH-hChhc--
Confidence 666778999999999999999999999853 33 6999999999999999999999999864 68975
Q ss_pred cCCCchhHHHHHhhhhhhhhHHHHHHHHHHHhhHHHhhCCCccccCchhhHHHHHHHHHHHHHHHHHHHHHhCCccccch
Q 005037 491 HGKISLGFRLGYCCYGLWAPSCLATLFYSVVPSLYLLKGIPLFPEITSPWIIPFAYVIFAKYGGSLVEFLWCGGTALGWW 570 (717)
Q Consensus 491 ~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~ll~g~~~~p~~~~~~~lp~~~~~~~~~~~~ll~~~~~g~~~~~ww 570 (717)
.+++++.||++|+++++|++.++++++|+++|++|+++|+.++... +..++++++..+....+.+...+|..+..||
T Consensus 500 ~~gL~~~qRl~y~~~~l~~l~g~~~l~~l~~Pl~~l~~gi~~i~a~---~~~i~~y~lP~~~~~~l~~~~~~g~~r~~~w 576 (852)
T PRK11498 500 GKGLKLAQRLCYANAMLHFLSGIPRLIFLTAPLAFLLLHAYIIYAP---ALMIALFVLPHMIHASLTNSRIQGKYRHSFW 576 (852)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChheeCC---hHHHHHHHHHHHHHHHHHHHHhcCcchHhHH
Confidence 4689999999999999999999999999999999999999888532 2233333333333344555556677777888
Q ss_pred hhhhHHHHHHHHhHHHHHHHHHHHHhCCCCCCeeeCccCCcchhhhhhhcceeeecccchhHHHHHHHHHHHHHHHHHHH
Q 005037 571 NDQRLWLYKRTSSYLFAFIDTILKTLGFSESAFVVTAKVADQDVLERYEKEIMEFGDTSSMFTILSTLALLNLFCLIGAV 650 (717)
Q Consensus 571 ~~~r~w~i~~~~~~l~~~~~~l~k~lg~~~~~F~VT~K~~~~~~~~~y~~~~~~f~~~~~l~~p~~~l~~l~l~al~~gi 650 (717)
++. +..+.++..+ ..++...+++++.+|+||||++..+ ++.|+| .+..|.++++++|++|+++|+
T Consensus 577 sei----ye~v~a~~l~-~~~~~~ll~p~~~~F~VTpKg~~~~------~~~~~~----~~~~P~~~L~~L~l~gl~~g~ 641 (852)
T PRK11498 577 SEI----YETVLAWYIA-PPTTVALFNPHKGKFNVTAKGGLVE------EEYVDW----VISRPYIFLVLLNLVGVAVGI 641 (852)
T ss_pred HHH----HHHHHHHHHH-HHHHHHHcCccCCCcccCCCCcccc------ccceeh----HHHHHHHHHHHHHHHHHHHHH
Confidence 763 4444444444 3444557899999999999986533 344565 466788899999999999999
Q ss_pred HHHHhcccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcccCCC
Q 005037 651 KRVIIDDGFVKLYETMILQILLCSTLVLINWPLYQGLFLRKDNG 694 (717)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~P~~~gl~~r~~~~ 694 (717)
++...+. ......+.++++|+.|+++++...+....+++...
T Consensus 642 ~r~~~~~--~~~~~~~~~~~~W~~~nl~~l~~a~~~~~e~~~~r 683 (852)
T PRK11498 642 WRYFYGP--PNEILTVIVSLVWVFYNLIILGGAVAVSVESKQVR 683 (852)
T ss_pred HHHHhCC--cccchhhhhhHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 9987641 12335567889999999999988888888876533
No 12
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=100.00 E-value=3.4e-69 Score=635.72 Aligned_cols=506 Identities=22% Similarity=0.272 Sum_probs=393.4
Q ss_pred HHHHHHHHHHHH-HHHHHHHhc-ccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhcceecccccccccccccccCCC
Q 005037 21 YRVFVVSVFVCI-FFIWVYRLC-HIPNKHENGKLLWVWIGLFAAELWLGFYWIFTQSLRWNRVRRLTFRDRLSQRYEDKL 98 (717)
Q Consensus 21 ~r~~~~~~~~~~-~~~~~~R~~-~l~~~~~~~~~~~~~~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~~~ 98 (717)
-|++.++..+++ +.|++||++ ++|. +.+.+ ..++++++++|+++.+..++..+..+.|.+|.+.+.. ...+.+
T Consensus 56 ~~~~~~~~~~~~~~~y~~wr~~~tl~~-~~~~~-~~~~~~l~~~e~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~ 130 (713)
T TIGR03030 56 PRLLLLVLSVFISLRYLWWRLTETLPF-DNTLN-FIFGTLLLLAELYSITILLLGYFQTVRPLDRTPVPLP---LDPEEW 130 (713)
T ss_pred HHHHHHHHHHHHHHHHHHhheeeecCC-CccHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccCCC---CCcccC
Confidence 476665555554 679999999 5654 32332 3456789999999888777776667778777653321 124568
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCchh
Q 005037 99 PGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPAA 178 (717)
Q Consensus 99 P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~ 178 (717)
|+|||+||||| |+++++++|+.+++++|||+++++|||+||||+|.|.....++++
T Consensus 131 P~VsViIP~yN---E~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~--------------------- 186 (713)
T TIGR03030 131 PTVDVFIPTYN---EDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQA--------------------- 186 (713)
T ss_pred CeeEEEEcCCC---CCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhh---------------------
Confidence 99999999999 888899999999999999999999999999999987432211110
Q ss_pred hhhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccC
Q 005037 179 YFINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKR 258 (717)
Q Consensus 179 yf~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekr 258 (717)
++++-+..++++ .++ .++.|++|+++
T Consensus 187 -----~~~~~~~~~~~l------~~~-------------------------------------------~~v~yi~r~~n 212 (713)
T TIGR03030 187 -----EAAQRREELKEF------CRK-------------------------------------------LGVNYITRPRN 212 (713)
T ss_pred -----hhhhhHHHHHHH------HHH-------------------------------------------cCcEEEECCCC
Confidence 000000111110 000 12789998765
Q ss_pred CCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhh-ccCCCCeEEEEeccceeccCCc---c--
Q 005037 259 PWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFI-DEEKGHEVAFVQFPQNFDNVTK---N-- 332 (717)
Q Consensus 259 p~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~-d~~~~~~vg~VQ~Pq~f~n~~~---~-- 332 (717)
+|+||||+|+|+++ ++||+|+++|||++++ ||+|++++++|. || ++|+||+||.|+|.+. |
T Consensus 213 ----~~~KAgnLN~al~~----a~gd~Il~lDAD~v~~-pd~L~~~v~~f~~dp----~v~~Vqtp~~f~~p~~~~~nl~ 279 (713)
T TIGR03030 213 ----VHAKAGNINNALKH----TDGELILIFDADHVPT-RDFLQRTVGWFVEDP----KLFLVQTPHFFVSPDPIERNLG 279 (713)
T ss_pred ----CCCChHHHHHHHHh----cCCCEEEEECCCCCcC-hhHHHHHHHHHHhCC----CEEEEeCCeeccCCCHHhhhhH
Confidence 68999999999998 7999999999999997 999999999995 55 7999999999988653 2
Q ss_pred --hhhhhhHHHHHHHHHhhhhccCCcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccc
Q 005037 333 --ELYSNSSRIFNEVELQGLDGYGCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTY 410 (717)
Q Consensus 333 --d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Y 410 (717)
+.+.++...||+.++.|++.++++++||+|+++||+++++ +|
T Consensus 280 ~~~~~~~e~~~f~~~i~~g~~~~~~~~~~Gs~~~iRR~al~~--------------iG---------------------- 323 (713)
T TIGR03030 280 TFRRMPNENELFYGLIQDGNDFWNAAFFCGSAAVLRREALDE--------------IG---------------------- 323 (713)
T ss_pred HHHHhhhHHHHHHHHHHHHHhhhCCeeecCceeEEEHHHHHH--------------cC----------------------
Confidence 2234556788899999999999999999999999999998 65
Q ss_pred cccCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCccccccCCcCHHHHHHHHHHHhcchHHHHHhhhcccccc
Q 005037 411 ERNTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDAFLGVSPTTLLQLLVQHKRWSEGNFQIFISKYCPAWHA 490 (717)
Q Consensus 411 e~~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~lqil~~~~~pl~~~ 490 (717)
||++++++||+++++++|++||+++|+++. ...|++|+|++++++||.||++|++|+++. .+|++
T Consensus 324 ----------Gf~~~~vtED~~l~~rL~~~G~~~~y~~~~--~~~g~~p~sl~~~~~Qr~RWa~G~~qi~~~-~~pl~-- 388 (713)
T TIGR03030 324 ----------GIAGETVTEDAETALKLHRRGWNSAYLDRP--LIAGLAPETLSGHIGQRIRWAQGMMQIFRL-DNPLL-- 388 (713)
T ss_pred ----------CCCCCCcCcHHHHHHHHHHcCCeEEEeccc--cccccCCCCHHHHHHHHHHHhcChHHHHhh-hCccc--
Confidence 666778999999999999999999999853 447999999999999999999999999875 48975
Q ss_pred cCCCchhHHHHHhhhhhhhhHHHHHHHHHHHhhHHHhhCCCccccCchhhHHHHHHHHHHHHHHHHHH-HHHhCCccccc
Q 005037 491 HGKISLGFRLGYCCYGLWAPSCLATLFYSVVPSLYLLKGIPLFPEITSPWIIPFAYVIFAKYGGSLVE-FLWCGGTALGW 569 (717)
Q Consensus 491 ~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~ll~g~~~~p~~~~~~~lp~~~~~~~~~~~~ll~-~~~~g~~~~~w 569 (717)
.+++++.||++|+++++|++.++++++|+++|++++++|+++++..... .++++ +.+++.+++. ....|..+..|
T Consensus 389 ~~gl~~~qrl~y~~~~~~~~~~~~~~~~~~~P~~~l~~~~~~~~~~~~~---~~~~~-lp~~~~~~~~~~~~~~~~~~~~ 464 (713)
T TIGR03030 389 KRGLSFPQRLCYLNAMLFWFFPLPRVIFLTAPLAYLFFGLNIFVASALE---ILAYA-LPHMLHSLLTNSYLFGRVRWPF 464 (713)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceeCCHHH---HHHHH-HHHHHHHHHHHHHHcCCeecch
Confidence 3679999999999999999999999999999999999999998763221 11222 2333334443 44567777889
Q ss_pred hhhhhHHHHHHHHhHHHHHHHHHHHHhCCCCCCeeeCccCCcchhhhhhhcceeeecccchhHHHHHHHHHHHHHHHHHH
Q 005037 570 WNDQRLWLYKRTSSYLFAFIDTILKTLGFSESAFVVTAKVADQDVLERYEKEIMEFGDTSSMFTILSTLALLNLFCLIGA 649 (717)
Q Consensus 570 w~~~r~w~i~~~~~~l~~~~~~l~k~lg~~~~~F~VT~K~~~~~~~~~y~~~~~~f~~~~~l~~p~~~l~~l~l~al~~g 649 (717)
|++ +..+...++.+..++.+.+++++.+|+||||++..+.. ..++++.|.++++++|++|+++|
T Consensus 465 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~F~VT~Kg~~~~~~-----------~~~~~~~p~~~l~~l~~~~~~~~ 528 (713)
T TIGR03030 465 WSE-----VYETVLAVYLLPPVLVTLLNPKKPKFNVTPKGELLDED-----------YFSPLSRPYLILFALILAGLAFG 528 (713)
T ss_pred HHH-----HHHHHHHHHHHHHHHHHHhCcCCCCceecCCCcccccc-----------ccchHHHHHHHHHHHHHHHHHHH
Confidence 987 23444455666777888899999999999998754321 13489999999999999999999
Q ss_pred HHHHHhcccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCC
Q 005037 650 VKRVIIDDGFVKLYETMILQILLCSTLVLINWPLYQGLFLRKDNGKM 696 (717)
Q Consensus 650 i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~P~~~gl~~r~~~~~~ 696 (717)
+++...+ +.....++++++|+.|+++++..-+.....|+++.+-
T Consensus 529 ~~~~~~~---~~~~~~~~~~~~w~~~n~~~~~~~~~~~~~r~QrR~~ 572 (713)
T TIGR03030 529 LYRIYGY---PIERGVLLVVLGWNLLNLILLGAALAVVAERRQRRSS 572 (713)
T ss_pred HHHHhcC---ccccchhhHHHHHHHHHHHHHHHHHHHHccCCCCCCc
Confidence 9998643 2334567789999999999999999999988876643
No 13
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=100.00 E-value=1.8e-37 Score=361.17 Aligned_cols=363 Identities=14% Similarity=0.111 Sum_probs=242.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc-cCCCC-CcchhH--HHHHHHHHHHHHHHHHHHHHhhhcc--eeccccccccccccc
Q 005037 20 FYRVFVVSVFVCIFFIWVYRLCH-IPNKH-ENGKLL--WVWIGLFAAELWLGFYWIFTQSLRW--NRVRRLTFRDRLSQR 93 (717)
Q Consensus 20 ~~r~~~~~~~~~~~~~~~~R~~~-l~~~~-~~~~~~--~~~~~~~~~E~~~~~~~~l~~~~~~--~p~~r~~~~~~l~~~ 93 (717)
+.|++.++..++...+..|+... ++..+ ...+.. ....+++..+.+.+..-++..+... ++..+...+. ..+.
T Consensus 40 ~rr~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~lf~~~~~w~~~~~~~a~~g~~~~~~~~~~~~~~~~~-~~~~ 118 (691)
T PRK05454 40 LRRLILLGLTLAQTAVATWEMKAVLPYGGWTLLEPALLVLFALLFAWISLGFWTALMGFLQLLRGRDKYSISASA-AGDP 118 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccCCccc-ccCC
Confidence 57877777777788899999884 43332 111211 1112233334332222222222111 1111101010 0111
Q ss_pred ccCCCCceEEEEecCCCCCCChH----HHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhc
Q 005037 94 YEDKLPGVDIFVCTADPKIEPPM----MVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKF 169 (717)
Q Consensus 94 ~~~~~P~VdV~I~t~n~~~Ep~~----~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~ 169 (717)
.....|+|+|+||+|| |+++ .++.|++|+.++|||. +++++|+||+++|.+... .|+ . |...|+++
T Consensus 119 ~~~~~~~VaVliP~yN---Ed~~~v~~~L~a~~~Sl~~~~~~~-~~e~~vLdD~~d~~~~~~-e~~-~----~~~L~~~~ 188 (691)
T PRK05454 119 PPPPEARTAILMPIYN---EDPARVFAGLRAMYESLAATGHGA-HFDFFILSDTRDPDIAAA-EEA-A----WLELRAEL 188 (691)
T ss_pred CCCCCCceEEEEeCCC---CChHHHHHHHHHHHHHHHhcCCCC-CEEEEEEECCCChhHHHH-HHH-H----HHHHHHhc
Confidence 1345789999999999 7775 4677778888899984 799999999999976431 111 1 11122221
Q ss_pred CCCCCCchhhhhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCe
Q 005037 170 NVEPRSPAAYFINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPT 249 (717)
Q Consensus 170 ~v~~r~p~~yf~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~ 249 (717)
+ .-++
T Consensus 189 ~---------------------------------------------------------------------------~~~~ 193 (691)
T PRK05454 189 G---------------------------------------------------------------------------GEGR 193 (691)
T ss_pred C---------------------------------------------------------------------------CCCc
Confidence 1 0124
Q ss_pred EEEEeeccCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhh-ccCCCCeEEEEeccceecc
Q 005037 250 LVYLAREKRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFI-DEEKGHEVAFVQFPQNFDN 328 (717)
Q Consensus 250 l~yv~Rekrp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~-d~~~~~~vg~VQ~Pq~f~n 328 (717)
+.|.+|++| .++||||+|.+++..+ .++||++++|||++++ +|+|++++++|. || ++|+||+++.+.|
T Consensus 194 i~yr~R~~n----~~~KaGNl~~~~~~~~--~~~eyivvLDADs~m~-~d~L~~lv~~m~~dP----~vGlVQt~~~~~n 262 (691)
T PRK05454 194 IFYRRRRRN----VGRKAGNIADFCRRWG--GAYDYMVVLDADSLMS-GDTLVRLVRLMEANP----RAGLIQTLPVAVG 262 (691)
T ss_pred EEEEECCcC----CCccHHHHHHHHHhcC--CCcCEEEEEcCCCCCC-HHHHHHHHHHHhhCc----CEEEEeCCccCcC
Confidence 889888765 5789999999999753 5679999999999998 999999999986 66 7999999999887
Q ss_pred CCcchhhhhhH----HHHHHHHHhhhhccC--CcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhh
Q 005037 329 VTKNELYSNSS----RIFNEVELQGLDGYG--CPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETS 402 (717)
Q Consensus 329 ~~~~d~~~~~~----~~f~~~~~~g~d~~~--~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~ 402 (717)
.+ ..++..+ .++......|.+.|+ ...|+|+|+++||+++.+ .+|...-
T Consensus 263 ~~--slfaR~qqf~~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~--------------~~glp~L--------- 317 (691)
T PRK05454 263 AD--TLFARLQQFATRVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAE--------------HCGLPPL--------- 317 (691)
T ss_pred CC--CHHHHHHHHHHHHHHHHHHhhhhhhccCccccccceEEEEHHHHHH--------------hcCCccc---------
Confidence 64 2333322 223334567777665 356899999999999988 4443210
Q ss_pred hhcccccccccCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCccccccCCcCHHHHHHHHHHHhcchHHHHHh
Q 005037 403 KALASCTYERNTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDAFLGVSPTTLLQLLVQHKRWSEGNFQIFIS 482 (717)
Q Consensus 403 ~~v~~c~Ye~~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~lqil~~ 482 (717)
...+||..++++||++++.+++++||+++|+++. ..+++++|+|+.++++||.||++|++|++..
T Consensus 318 --------------~g~~p~~~~~LseD~~~a~~l~~~GyrV~~~pd~-~~~~ee~P~tl~~~~~qr~RW~~G~lQ~l~~ 382 (691)
T PRK05454 318 --------------PGRGPFGGHILSHDFVEAALMRRAGWGVWLAPDL-PGSYEELPPNLLDELKRDRRWCQGNLQHLRL 382 (691)
T ss_pred --------------cccCCCCCCcccHHHHHHHHHHHCCCEEEEcCcc-ccccccCCCCHHHHHHHHHHHHhchHHHHHH
Confidence 0114787889999999999999999999999852 3457999999999999999999999998742
Q ss_pred hhcccccccCCCchhHHHHHhhhhhhhhHH-HHHHHHHHHhhHH
Q 005037 483 KYCPAWHAHGKISLGFRLGYCCYGLWAPSC-LATLFYSVVPSLY 525 (717)
Q Consensus 483 ~~~pl~~~~~~l~~~qrl~y~~~~~~~~~~-~~~l~~~~~P~l~ 525 (717)
++ .+++++.+|++|+...+.++.+ ++.+++++.|++.
T Consensus 383 -----l~-~~gl~~~~R~~~l~g~~~yl~~P~wll~l~l~~~~~ 420 (691)
T PRK05454 383 -----LL-AKGLHPVSRLHFLTGIMSYLSAPLWLLFLLLGTALA 420 (691)
T ss_pred -----HH-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 3679999999988766555543 3334444444433
No 14
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=100.00 E-value=9.7e-37 Score=318.46 Aligned_cols=242 Identities=16% Similarity=0.267 Sum_probs=184.1
Q ss_pred eEEEEecCCCCCCChHHHHHHHHHHHc----CCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCc
Q 005037 101 VDIFVCTADPKIEPPMMVINTVLSVMA----YDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSP 176 (717)
Q Consensus 101 VdV~I~t~n~~~Ep~~~v~~Tv~s~la----~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p 176 (717)
|+|+||+|| |++.++.+|+.+... +||++ +++|||+|||+++.... .|.+.+ ..+|+++.
T Consensus 1 ~SIliP~~n---e~~~~l~~~l~~~~~~~~~~~~~~-~~eI~vldD~~d~~~~~--~~~~~~----~~l~~~~~------ 64 (254)
T cd04191 1 TAIVMPVYN---EDPARVFAGLRAMYESLAKTGLAD-HFDFFILSDTRDPDIWL--AEEAAW----LDLCEELG------ 64 (254)
T ss_pred CEEEEeCCC---CCHHHHHHHHHHHHHHHHhcCCcC-ceEEEEECCCCChHHHH--HHHHHH----HHHHHHhC------
Confidence 689999999 999999999999775 67632 69999999998874211 111100 00111110
Q ss_pred hhhhhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeec
Q 005037 177 AAYFINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLARE 256 (717)
Q Consensus 177 ~~yf~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Re 256 (717)
..++++|++|+
T Consensus 65 ---------------------------------------------------------------------~~~~v~~~~r~ 75 (254)
T cd04191 65 ---------------------------------------------------------------------AQGRIYYRRRR 75 (254)
T ss_pred ---------------------------------------------------------------------CCCcEEEEEcC
Confidence 02459999998
Q ss_pred cCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhh-ccCCCCeEEEEeccceeccCCcchhh
Q 005037 257 KRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFI-DEEKGHEVAFVQFPQNFDNVTKNELY 335 (717)
Q Consensus 257 krp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~-d~~~~~~vg~VQ~Pq~f~n~~~~d~~ 335 (717)
++ .|.||||||.++...+ +++|+|+++|||+++. |++|++++.+|. || ++|+||+|+.+.|.+. .+
T Consensus 76 ~~----~g~Kag~l~~~~~~~~--~~~~~i~~~DaD~~~~-p~~l~~~v~~~~~~~----~vg~vq~~~~~~n~~~--~~ 142 (254)
T cd04191 76 EN----TGRKAGNIADFCRRWG--SRYDYMVVLDADSLMS-GDTIVRLVRRMEANP----RAGIIQTAPKLIGAET--LF 142 (254)
T ss_pred CC----CCccHHHHHHHHHHhC--CCCCEEEEEeCCCCCC-HHHHHHHHHHHHhCC----CEEEEeCCceeECCCC--HH
Confidence 76 6889999999998521 5789999999999997 999999999996 66 7999999999988652 22
Q ss_pred hhh----HHHHHHHHHhhhhccCC--cccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhccccc
Q 005037 336 SNS----SRIFNEVELQGLDGYGC--PLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCT 409 (717)
Q Consensus 336 ~~~----~~~f~~~~~~g~d~~~~--~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~ 409 (717)
... ...|...++.|++.|++ .+|+|+++++||++|++ ++++++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~--------------~~~~~~----------------- 191 (254)
T cd04191 143 ARLQQFANRLYGPVFGRGLAAWQGGEGNYWGHNAIIRVAAFME--------------HCALPV----------------- 191 (254)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccCccceEEEEEHHHHHH--------------hcCCcc-----------------
Confidence 222 23444566677776543 57899999999999987 443321
Q ss_pred ccccCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCccccccCCcCHHHHHHHHHHHhcchHH
Q 005037 410 YERNTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDAFLGVSPTTLLQLLVQHKRWSEGNFQ 478 (717)
Q Consensus 410 Ye~~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~lq 478 (717)
-|.-+||..++++||+++|++++.+||+++|.+.. .+.++++|+|++++++||.||++|++|
T Consensus 192 ------i~g~g~~~~~~l~eD~~l~~~~~~~G~ri~~~~~~-~~~~~~~p~~~~~~~~qr~RW~~G~~q 253 (254)
T cd04191 192 ------LPGRPPFGGHILSHDFVEAALMRRAGWEVRLAPDL-EGSYEECPPTLIDFLKRDRRWCQGNLQ 253 (254)
T ss_pred ------ccCCCCCCCCeecHHHHHHHHHHHcCCEEEEccCC-cceEeECCCCHHHHHHHHHHHHhhcCc
Confidence 01124788889999999999999999999999853 334689999999999999999999987
No 15
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=100.00 E-value=1.1e-34 Score=326.41 Aligned_cols=231 Identities=19% Similarity=0.201 Sum_probs=182.0
Q ss_pred CCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCC
Q 005037 96 DKLPGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRS 175 (717)
Q Consensus 96 ~~~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~ 175 (717)
+..|.|+|+||+|| |+ ..+.+|+.|++++||| +++|+|+|||++|.|.+.+.+.. ++
T Consensus 72 ~~~p~vsViIP~yN---E~-~~i~~~l~sll~q~yp--~~eIivVdDgs~D~t~~~~~~~~----------~~------- 128 (444)
T PRK14583 72 KGHPLVSILVPCFN---EG-LNARETIHAALAQTYT--NIEVIAINDGSSDDTAQVLDALL----------AE------- 128 (444)
T ss_pred CCCCcEEEEEEeCC---CH-HHHHHHHHHHHcCCCC--CeEEEEEECCCCccHHHHHHHHH----------Hh-------
Confidence 35799999999999 65 4689999999999999 58999999999998875444321 00
Q ss_pred chhhhhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEee
Q 005037 176 PAAYFINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAR 255 (717)
Q Consensus 176 p~~yf~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~R 255 (717)
.|++.++.+
T Consensus 129 -----------------------------------------------------------------------~~~v~vv~~ 137 (444)
T PRK14583 129 -----------------------------------------------------------------------DPRLRVIHL 137 (444)
T ss_pred -----------------------------------------------------------------------CCCEEEEEe
Confidence 122455554
Q ss_pred ccCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhh
Q 005037 256 EKRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELY 335 (717)
Q Consensus 256 ekrp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~ 335 (717)
++ +++|++|+|.|++. +++|+++++|||++++ ||++++++..|.+. +++|.||+.....|.+ ...
T Consensus 138 ~~-----n~Gka~AlN~gl~~----a~~d~iv~lDAD~~~~-~d~L~~lv~~~~~~---~~~g~v~g~~~~~~~~--~~~ 202 (444)
T PRK14583 138 AH-----NQGKAIALRMGAAA----ARSEYLVCIDGDALLD-KNAVPYLVAPLIAN---PRTGAVTGNPRIRTRS--TLI 202 (444)
T ss_pred CC-----CCCHHHHHHHHHHh----CCCCEEEEECCCCCcC-HHHHHHHHHHHHhC---CCeEEEEccceecCCC--cch
Confidence 43 35799999999998 6899999999999996 99999999887642 3799999987765532 222
Q ss_pred hh----hHHHHHHHHHhhhhccCCcc-cccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccc
Q 005037 336 SN----SSRIFNEVELQGLDGYGCPL-YTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTY 410 (717)
Q Consensus 336 ~~----~~~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Y 410 (717)
+. +...+++...++.+..+..+ .+|+++++||+++++ +|
T Consensus 203 ~~~~~~e~~~~~~~~~~~~~~~g~~~~~sG~~~~~rr~al~~--------------vG---------------------- 246 (444)
T PRK14583 203 GRVQVGEFSSIIGLIKRTQRVYGQVFTVSGVVAAFRRRALAD--------------VG---------------------- 246 (444)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhCCceEecCceeEEEHHHHHH--------------cC----------------------
Confidence 22 22233444555555555554 469999999999998 64
Q ss_pred cccCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCccccccCCcCHHHHHHHHHHHhcchHHHHHhh
Q 005037 411 ERNTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDAFLGVSPTTLLQLLVQHKRWSEGNFQIFISK 483 (717)
Q Consensus 411 e~~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~lqil~~~ 483 (717)
||+.+.++||++++++++.+||++.|++.. ..++++|+|++++++||.||++|.+|+++++
T Consensus 247 ----------g~~~~~i~ED~dl~~rl~~~G~~i~~~p~a--~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~ 307 (444)
T PRK14583 247 ----------YWSPDMITEDIDISWKLQLKHWSVFFEPRG--LCWILMPETLRGLWKQRLRWAQGGAEVFLKN 307 (444)
T ss_pred ----------CCCCCcccccHHHHHHHHHcCCeEEEeecc--EEeeeCCCCHHHHHHHHHHHhCcHHHHHHHH
Confidence 677788999999999999999999999853 4479999999999999999999999998764
No 16
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=4.1e-35 Score=327.43 Aligned_cols=233 Identities=27% Similarity=0.360 Sum_probs=181.8
Q ss_pred CCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCch
Q 005037 98 LPGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPA 177 (717)
Q Consensus 98 ~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~ 177 (717)
+|.|||+||+|| |+++++++|+.|++++||| +++|+|+|||++|.|.+.+.|. +.+
T Consensus 53 ~p~vsviiP~yn---E~~~~~~~~l~s~~~~dyp--~~evivv~d~~~d~~~~~~~~~--------------~~~----- 108 (439)
T COG1215 53 LPKVSVIIPAYN---EEPEVLEETLESLLSQDYP--RYEVIVVDDGSTDETYEILEEL--------------GAE----- 108 (439)
T ss_pred CCceEEEEecCC---CchhhHHHHHHHHHhCCCC--CceEEEECCCCChhHHHHHHHH--------------Hhh-----
Confidence 599999999999 8888999999999999999 4899999999999887643332 110
Q ss_pred hhhhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeecc
Q 005037 178 AYFINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREK 257 (717)
Q Consensus 178 ~yf~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rek 257 (717)
++ |++.-+..++
T Consensus 109 ----------------------------------------------~~----------------------~~~~~~~~~~ 120 (439)
T COG1215 109 ----------------------------------------------YG----------------------PNFRVIYPEK 120 (439)
T ss_pred ----------------------------------------------cC----------------------cceEEEeccc
Confidence 00 0112121111
Q ss_pred CCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhhhh
Q 005037 258 RPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELYSN 337 (717)
Q Consensus 258 rp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~ 337 (717)
++++|++|+|.+++. +++|+|+++|||++|+ ||+|++++..|.|++ .+|.+|.|+.+.+.+.....+.
T Consensus 121 ----~~~gK~~al~~~l~~----~~~d~V~~~DaD~~~~-~d~l~~~~~~f~~~~---~~~v~~~~~~~~~~~~~~~l~~ 188 (439)
T COG1215 121 ----KNGGKAGALNNGLKR----AKGDVVVILDADTVPE-PDALRELVSPFEDPP---VGAVVGTPRIRNRPDPSNLLGR 188 (439)
T ss_pred ----cCccchHHHHHHHhh----cCCCEEEEEcCCCCCC-hhHHHHHHhhhcCCC---eeEEeCCceeeecCChhhhcch
Confidence 368999999999998 5799999999999997 999999999999874 4578899987766532112222
Q ss_pred hHHHHHHH-----HHhhhhccCCcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccccc
Q 005037 338 SSRIFNEV-----ELQGLDGYGCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYER 412 (717)
Q Consensus 338 ~~~~f~~~-----~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~ 412 (717)
.+...|.. ...+.+.....+++|+++++||++|++ +|
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~g~~~~~~G~~~~~rr~aL~~--------------~g------------------------ 230 (439)
T COG1215 189 IQAIEYLSAFYFRLRAASKGGLISFLSGSSSAFRRSALEE--------------VG------------------------ 230 (439)
T ss_pred hcchhhhhhHHHhhhhhhhcCCeEEEcceeeeEEHHHHHH--------------hC------------------------
Confidence 22222222 222333334567899999999999998 54
Q ss_pred cCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCccccccCCcCHHHHHHHHHHHhcchHHHHHh
Q 005037 413 NTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDAFLGVSPTTLLQLLVQHKRWSEGNFQIFIS 482 (717)
Q Consensus 413 ~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~lqil~~ 482 (717)
||...+++||.++++++|.+|||++|+++. ..++++|+|+.++++||.||++|++|++..
T Consensus 231 --------~~~~~~i~ED~~lt~~l~~~G~~~~~~~~~--~~~~~~p~t~~~~~~Qr~RW~~g~~~~~~~ 290 (439)
T COG1215 231 --------GWLEDTITEDADLTLRLHLRGYRVVYVPEA--IVWTEAPETLKELWRQRLRWARGGLQVLLL 290 (439)
T ss_pred --------CCCCCceeccHHHHHHHHHCCCeEEEeecc--eEeeeCcccHHHHHHHHHHHHcccceeeeh
Confidence 688889999999999999999999999853 458999999999999999999999999864
No 17
>PRK11204 N-glycosyltransferase; Provisional
Probab=100.00 E-value=1.2e-33 Score=315.30 Aligned_cols=230 Identities=22% Similarity=0.268 Sum_probs=179.7
Q ss_pred CCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCC
Q 005037 96 DKLPGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRS 175 (717)
Q Consensus 96 ~~~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~ 175 (717)
...|.|+|+||+|| |+ +.+++|+.|+++++|| +++|+|+|||++|.|.+.+.+.+ +
T Consensus 51 ~~~p~vsViIp~yn---e~-~~i~~~l~sl~~q~yp--~~eiiVvdD~s~d~t~~~l~~~~----------~-------- 106 (420)
T PRK11204 51 KEYPGVSILVPCYN---EG-ENVEETISHLLALRYP--NYEVIAINDGSSDNTGEILDRLA----------A-------- 106 (420)
T ss_pred CCCCCEEEEEecCC---CH-HHHHHHHHHHHhCCCC--CeEEEEEECCCCccHHHHHHHHH----------H--------
Confidence 45899999999999 54 5899999999999999 68999999999998865443321 0
Q ss_pred chhhhhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEee
Q 005037 176 PAAYFINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAR 255 (717)
Q Consensus 176 p~~yf~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~R 255 (717)
+.|++.++.+
T Consensus 107 ----------------------------------------------------------------------~~~~v~~i~~ 116 (420)
T PRK11204 107 ----------------------------------------------------------------------QIPRLRVIHL 116 (420)
T ss_pred ----------------------------------------------------------------------hCCcEEEEEc
Confidence 0133666765
Q ss_pred ccCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhh-ccCCCCeEEEEeccceeccCCcchh
Q 005037 256 EKRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFI-DEEKGHEVAFVQFPQNFDNVTKNEL 334 (717)
Q Consensus 256 ekrp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~-d~~~~~~vg~VQ~Pq~f~n~~~~d~ 334 (717)
++ +.+|++|+|.|++. +++|+++++|||++++ ||+|++++..|. || +++.||+.....|.. ..
T Consensus 117 ~~-----n~Gka~aln~g~~~----a~~d~i~~lDaD~~~~-~d~L~~l~~~~~~~~----~v~~v~g~~~~~~~~--~~ 180 (420)
T PRK11204 117 AE-----NQGKANALNTGAAA----ARSEYLVCIDGDALLD-PDAAAYMVEHFLHNP----RVGAVTGNPRIRNRS--TL 180 (420)
T ss_pred CC-----CCCHHHHHHHHHHH----cCCCEEEEECCCCCCC-hhHHHHHHHHHHhCC----CeEEEECCceeccch--hH
Confidence 44 35799999999998 6899999999999997 999999999995 54 799999987766532 12
Q ss_pred hhhhHHH----HHHHHHhhhhccCCcc-cccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhccccc
Q 005037 335 YSNSSRI----FNEVELQGLDGYGCPL-YTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCT 409 (717)
Q Consensus 335 ~~~~~~~----f~~~~~~g~d~~~~~~-~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~ 409 (717)
.+..+.. .++....+....+... .+|+++++||+++++ +|
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~--------------vg--------------------- 225 (420)
T PRK11204 181 LGRIQVGEFSSIIGLIKRAQRVYGRVFTVSGVITAFRKSALHE--------------VG--------------------- 225 (420)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhCCceEecceeeeeeHHHHHH--------------hC---------------------
Confidence 2222221 2222233333333333 468999999999998 65
Q ss_pred ccccCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCccccccCCcCHHHHHHHHHHHhcchHHHHHhh
Q 005037 410 YERNTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDAFLGVSPTTLLQLLVQHKRWSEGNFQIFISK 483 (717)
Q Consensus 410 Ye~~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~lqil~~~ 483 (717)
||+.+.++||++++++++++||++.|+++. .++++.|+|++++++||.||++|.+|.++..
T Consensus 226 -----------g~~~~~~~ED~~l~~rl~~~G~~i~~~p~~--~~~~~~p~t~~~~~~Qr~RW~~G~~~~l~~~ 286 (420)
T PRK11204 226 -----------YWSTDMITEDIDISWKLQLRGWDIRYEPRA--LCWILMPETLKGLWKQRLRWAQGGAEVLLKN 286 (420)
T ss_pred -----------CCCCCcccchHHHHHHHHHcCCeEEecccc--EEEeECcccHHHHHHHHHHHhcCHHHHHHHH
Confidence 666678899999999999999999999863 4479999999999999999999999998764
No 18
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=100.00 E-value=4e-33 Score=313.27 Aligned_cols=281 Identities=17% Similarity=0.204 Sum_probs=199.8
Q ss_pred CCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCC
Q 005037 96 DKLPGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRS 175 (717)
Q Consensus 96 ~~~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~ 175 (717)
++.|.|+|+||+|| |+ +.+.+||.|+++++||.++++|+|+||||+|.|.+.+.++++ +
T Consensus 46 ~~~P~vsVIIP~yN---e~-~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~----------~------- 104 (439)
T TIGR03111 46 GKLPDITIIIPVYN---SE-DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQN----------E------- 104 (439)
T ss_pred CCCCCEEEEEEeCC---Ch-HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHH----------h-------
Confidence 56899999999999 55 689999999999999999999999999999999765554311 0
Q ss_pred chhhhhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEee
Q 005037 176 PAAYFINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAR 255 (717)
Q Consensus 176 p~~yf~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~R 255 (717)
+ |++..+..
T Consensus 105 ------------------------------------------------~-----------------------~~v~v~~~ 113 (439)
T TIGR03111 105 ------------------------------------------------F-----------------------PGLSLRYM 113 (439)
T ss_pred ------------------------------------------------C-----------------------CCeEEEEe
Confidence 0 11221111
Q ss_pred ccCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhh-ccCCCCeEEEEeccceeccC--Ccc
Q 005037 256 EKRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFI-DEEKGHEVAFVQFPQNFDNV--TKN 332 (717)
Q Consensus 256 ekrp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~-d~~~~~~vg~VQ~Pq~f~n~--~~~ 332 (717)
++ .+||++|+|.|++. +++|+|+++|||++++ ||++++++..|. || +++.|++.+.-... +.+
T Consensus 114 ~~-----~~Gka~AlN~gl~~----s~g~~v~~~DaD~~~~-~d~L~~l~~~f~~~~----~v~~v~g~~~~~~~~~~~~ 179 (439)
T TIGR03111 114 NS-----DQGKAKALNAAIYN----SIGKYIIHIDSDGKLH-KDAIKNMVTRFENNP----DIHAMTGVILTDKELIEKT 179 (439)
T ss_pred CC-----CCCHHHHHHHHHHH----ccCCEEEEECCCCCcC-hHHHHHHHHHHHhCC----CeEEEEeEEecCchhhhhh
Confidence 21 36899999999998 6899999999999996 999999999997 44 68777664422110 000
Q ss_pred h----hhhhhHHHHHHHH---Hh--hhh-ccCCcc-cccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHh
Q 005037 333 E----LYSNSSRIFNEVE---LQ--GLD-GYGCPL-YTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEET 401 (717)
Q Consensus 333 d----~~~~~~~~f~~~~---~~--g~d-~~~~~~-~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~ 401 (717)
. .+... ..+++.. .. ... ..+..+ ++|+++++||+++.+ +|
T Consensus 180 ~~~~~~~~~~-~~~~~y~~~~l~~r~~~s~~~~~~~~sGa~~~~Rr~~l~~--------------vg------------- 231 (439)
T TIGR03111 180 KGRFLKLIRR-CEYFEYAQAFLAGRNFESQVNSLFTLSGAFSAFRRETILK--------------TQ------------- 231 (439)
T ss_pred cchhhhHhHH-hHHHHHHHHHHhhhHHHHhcCCeEEEccHHHhhhHHHHHH--------------hC-------------
Confidence 0 01111 1112211 11 111 122332 468888999999988 54
Q ss_pred hhhcccccccccCCcCcccccCCCCCcchHHHHHHHHh-cCCeEEEeCCCCccccccCCcCHHHHHHHHHHHhcchHHHH
Q 005037 402 SKALASCTYERNTQWGKEMGLKYGCPAEDVVTGLSIQS-RGWKSVYSKPERDAFLGVSPTTLLQLLVQHKRWSEGNFQIF 480 (717)
Q Consensus 402 ~~~v~~c~Ye~~t~wG~~~G~~~~svtED~~t~~rl~~-~Gwrsvy~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~lqil 480 (717)
||+.++++||++++++++. .|+++.|+++ +.++.++|+|++++++||.||++|.+|++
T Consensus 232 -------------------gf~~~~i~ED~~l~~rl~~~~g~kv~~~~~--a~~~~~~p~t~~~~~~QR~RW~rG~~qv~ 290 (439)
T TIGR03111 232 -------------------LYNSETVGEDTDMTFQIRELLDGKVYLCEN--AIFYVDPIDGLNKLYTQRQRWQRGELEVS 290 (439)
T ss_pred -------------------CCCCCCcCccHHHHHHHHHhcCCeEEECCC--CEEEEECCcCHHHHHHHHHHHhccHHHHH
Confidence 6777789999999999975 6999999875 35578999999999999999999999998
Q ss_pred HhhhcccccccCCCchhHHHHHhhhhhhhhHHHHHHHHHHHhhHHHhhCCCcc
Q 005037 481 ISKYCPAWHAHGKISLGFRLGYCCYGLWAPSCLATLFYSVVPSLYLLKGIPLF 533 (717)
Q Consensus 481 ~~~~~pl~~~~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~ll~g~~~~ 533 (717)
....++. .+ ++.++.++..+...+......++++++.++++++.+++.++.
T Consensus 291 ~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (439)
T TIGR03111 291 HMFFESA-NK-SIKGFFSNFMVRRIMYDHTFAFPRMIWYFAMIFLIFLGYPVK 341 (439)
T ss_pred HHHHhhh-hh-chhhhhhHHHHHHHHhhHhhHHHHHHHHHHHHHHHHhccHHH
Confidence 6543343 22 335566665554444444456777888888888887776544
No 19
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=100.00 E-value=3e-31 Score=299.57 Aligned_cols=269 Identities=17% Similarity=0.130 Sum_probs=185.3
Q ss_pred cCCCCceEEEEecCCCCCCChHHHHHHHHHH-HcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCC
Q 005037 95 EDKLPGVDIFVCTADPKIEPPMMVINTVLSV-MAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEP 173 (717)
Q Consensus 95 ~~~~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~-la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~ 173 (717)
..+.|+|+|+||+|| |. .+|.+||.|+ .++||| +++|+|+||+++|.|.+.+.+.+ +
T Consensus 62 ~~~~p~vaIlIPA~N---E~-~vI~~~l~s~L~~ldY~--~~eIiVv~d~ndd~T~~~v~~l~----------~------ 119 (504)
T PRK14716 62 SVPEKRIAIFVPAWR---EA-DVIGRMLEHNLATLDYE--NYRIFVGTYPNDPATLREVDRLA----------A------ 119 (504)
T ss_pred cCCCCceEEEEeccC---ch-hHHHHHHHHHHHcCCCC--CeEEEEEECCCChhHHHHHHHHH----------H------
Confidence 345899999999999 44 6999999996 478997 79999999999999876555431 0
Q ss_pred CCchhhhhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEE
Q 005037 174 RSPAAYFINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYL 253 (717)
Q Consensus 174 r~p~~yf~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv 253 (717)
+|| ++..+
T Consensus 120 -------------------------------------------------~~p-----------------------~v~~v 127 (504)
T PRK14716 120 -------------------------------------------------RYP-----------------------RVHLV 127 (504)
T ss_pred -------------------------------------------------HCC-----------------------CeEEE
Confidence 122 22222
Q ss_pred eeccCCCCCCCChHHHHHHHHHhcc--cCCCc---cEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceecc
Q 005037 254 AREKRPWHFQNFKAGAMNALIRVSS--KISNG---QVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDN 328 (717)
Q Consensus 254 ~Rekrp~~~~~~KAGALN~al~~s~--~~t~g---d~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n 328 (717)
. .++++ ..+|++|||.+++... ...+| |+++++|||++++ |++|+.....+.| .++||.|....+
T Consensus 128 v-~~~~g--p~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v~-Pd~Lr~~~~~~~~------~~~VQ~pv~~~~ 197 (504)
T PRK14716 128 I-VPHDG--PTSKADCLNWIYQAIFAFERERGIRFAIIVLHDAEDVIH-PLELRLYNYLLPR------HDFVQLPVFSLP 197 (504)
T ss_pred E-eCCCC--CCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCcC-ccHHHHHHhhcCC------CCEEecceeccC
Confidence 2 12222 3689999999997531 11234 9999999999997 9999876655433 568999976655
Q ss_pred CCcchhhhhhH----HHHHHHHHhhhhccCCcc-cccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhh
Q 005037 329 VTKNELYSNSS----RIFNEVELQGLDGYGCPL-YTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSK 403 (717)
Q Consensus 329 ~~~~d~~~~~~----~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~ 403 (717)
.+.+...+... ...+...+..++.+++++ ++|+|+++||++|++ ++.
T Consensus 198 ~~~~~~~ag~y~~ef~~~~~~~l~~r~~LG~~~~~~Gtg~afRR~aLe~--------------l~~-------------- 249 (504)
T PRK14716 198 RDWGEWVAGTYMDEFAESHLKDLPVREALGGLIPSAGVGTAFSRRALER--------------LAA-------------- 249 (504)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCeeEEeEHHHHHH--------------HHh--------------
Confidence 33222111111 111223345667787765 689999999999997 310
Q ss_pred hcccccccccCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCC-------------ccccccCCcCHHHHHHHHH
Q 005037 404 ALASCTYERNTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPER-------------DAFLGVSPTTLLQLLVQHK 470 (717)
Q Consensus 404 ~v~~c~Ye~~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~-------------~a~~g~aP~tl~~~~~Qr~ 470 (717)
+. | .++|+.+++|||+++|++++.+|||++|++... .+..+++|+|++++++||.
T Consensus 250 -------~~----G-G~~fd~~sLTED~dLglRL~~~G~rv~y~p~ai~~~~~~~~~~~~~v~t~e~~P~t~~a~~rQR~ 317 (504)
T PRK14716 250 -------ER----G-GQPFDSDSLTEDYDIGLRLKRAGFRQIFVRVRADDTTDRPDRRGEPIATREFFPDTFKAAVRQKA 317 (504)
T ss_pred -------hc----C-CCCCCCCCcchHHHHHHHHHHCCCEEEEecccccccccccccccccccccccCccCHHHHHHHHH
Confidence 00 0 014899999999999999999999999997531 1345789999999999999
Q ss_pred HHhcch-HHHHHhhhcccccccCCCchhHHHHHhhhhh
Q 005037 471 RWSEGN-FQIFISKYCPAWHAHGKISLGFRLGYCCYGL 507 (717)
Q Consensus 471 RWa~G~-lqil~~~~~pl~~~~~~l~~~qrl~y~~~~~ 507 (717)
||+.|. +|...+.-+.--...+.+.+++|.+.+..++
T Consensus 318 RW~~Gi~~Q~~~~~gw~~~~~~~~~~~rdr~~~~~~~~ 355 (504)
T PRK14716 318 RWIYGIAFQGWERLGWKGPAATKYMLWRDRKGLLTNLL 355 (504)
T ss_pred HHHhchHHhhHHhcCCCCchhhhhhHHHHHHHHHHHHH
Confidence 999995 7876432111001123466788877666443
No 20
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.97 E-value=6.5e-31 Score=269.14 Aligned_cols=227 Identities=23% Similarity=0.339 Sum_probs=172.4
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCchh
Q 005037 99 PGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPAA 178 (717)
Q Consensus 99 P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~ 178 (717)
|+|+|+||+|| |+ +.+.++|.|+++++||.++++|+|+|| |+|.|.+.+.+..+ ++.
T Consensus 1 p~vSViIp~yN---e~-~~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~~~~~~~~----------~~~-------- 57 (232)
T cd06437 1 PMVTVQLPVFN---EK-YVVERLIEAACALDYPKDRLEIQVLDD-STDETVRLAREIVE----------EYA-------- 57 (232)
T ss_pred CceEEEEecCC---cH-HHHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHHHHHHHHH----------HHh--------
Confidence 68999999999 54 689999999999999999999999998 89988865554310 000
Q ss_pred hhhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccC
Q 005037 179 YFINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKR 258 (717)
Q Consensus 179 yf~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekr 258 (717)
..-|++.++.+.++
T Consensus 58 ------------------------------------------------------------------~~~~~i~~~~~~~~ 71 (232)
T cd06437 58 ------------------------------------------------------------------AQGVNIKHVRRADR 71 (232)
T ss_pred ------------------------------------------------------------------hcCCceEEEECCCC
Confidence 00123666666543
Q ss_pred CCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhhhhh
Q 005037 259 PWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELYSNS 338 (717)
Q Consensus 259 p~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~ 338 (717)
.++|++|+|.|++. ++||+|+++|||++++ |++|+++..++.|+ ++++||++..+.|.+.+. ....
T Consensus 72 ----~G~k~~a~n~g~~~----a~~~~i~~~DaD~~~~-~~~l~~~~~~~~~~----~v~~v~~~~~~~~~~~~~-~~~~ 137 (232)
T cd06437 72 ----TGYKAGALAEGMKV----AKGEYVAIFDADFVPP-PDFLQKTPPYFADP----KLGFVQTRWGHINANYSL-LTRV 137 (232)
T ss_pred ----CCCchHHHHHHHHh----CCCCEEEEEcCCCCCC-hHHHHHhhhhhcCC----CeEEEecceeeEcCCCch-hhHh
Confidence 46799999999998 6999999999999997 99999988888766 699999877665543321 1111
Q ss_pred H----HHHHHHHHhhhhccCCc-ccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhccccccccc
Q 005037 339 S----RIFNEVELQGLDGYGCP-LYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYERN 413 (717)
Q Consensus 339 ~----~~f~~~~~~g~d~~~~~-~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~ 413 (717)
+ ..++.....+....+.. .++|+++++||+++++ +|
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~--------------vg------------------------- 178 (232)
T cd06437 138 QAMSLDYHFTIEQVARSSTGLFFNFNGTAGVWRKECIED--------------AG------------------------- 178 (232)
T ss_pred hhhhHHhhhhHhHhhHhhcCCeEEeccchhhhhHHHHHH--------------hC-------------------------
Confidence 1 11233333343333333 3579999999999988 66
Q ss_pred CCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCccccccCCcCHHHHHHHHHHHhcch
Q 005037 414 TQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDAFLGVSPTTLLQLLVQHKRWSEGN 476 (717)
Q Consensus 414 t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~ 476 (717)
||+.....||+++++|++.+||+++|++.. .+++..|+|++++++||+||++|.
T Consensus 179 -------g~~~~~~~ED~~l~~rl~~~G~~~~~~~~~--~v~~~~~~~~~~~~~q~~rW~~g~ 232 (232)
T cd06437 179 -------GWNHDTLTEDLDLSYRAQLKGWKFVYLDDV--VVPAELPASMSAYRSQQHRWSKGP 232 (232)
T ss_pred -------CCCCCcchhhHHHHHHHHHCCCeEEEeccc--eeeeeCCcCHHHHHHHHHHhccCC
Confidence 455556789999999999999999999853 457999999999999999999984
No 21
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.97 E-value=9.5e-30 Score=298.05 Aligned_cols=240 Identities=16% Similarity=0.218 Sum_probs=173.9
Q ss_pred cCCCCceEEEEecCCCCCCChHHHHHHHHHHH-cCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCC
Q 005037 95 EDKLPGVDIFVCTADPKIEPPMMVINTVLSVM-AYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEP 173 (717)
Q Consensus 95 ~~~~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~l-a~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~ 173 (717)
+++.|+|+|+||+|| |+ .++.+|+.+++ ++||| +++|+|+||++++.|.+.+.+. |+++
T Consensus 59 ~~~~~~vsIlVPa~n---E~-~vi~~~i~~ll~~ldYP--~~eI~vi~~~nD~~T~~~~~~l----------~~~~---- 118 (727)
T PRK11234 59 KPDEKPLAIMVPAWN---ET-GVIGNMAELAATTLDYE--NYHIFVGTYPNDPATQADVDAV----------CARF---- 118 (727)
T ss_pred cCCCCCEEEEEecCc---ch-hhHHHHHHHHHHhCCCC--CeEEEEEecCCChhHHHHHHHH----------HHHC----
Confidence 456799999999999 55 69999999987 79999 4899999988888777654432 1111
Q ss_pred CCchhhhhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEE
Q 005037 174 RSPAAYFINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYL 253 (717)
Q Consensus 174 r~p~~yf~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv 253 (717)
|.+ +++.+
T Consensus 119 ---------------------------------------------------p~~---------------------~~v~~ 126 (727)
T PRK11234 119 ---------------------------------------------------PNV---------------------HKVVC 126 (727)
T ss_pred ---------------------------------------------------CCc---------------------EEEEe
Confidence 110 12222
Q ss_pred eeccCCCCCCCChHHHHHHHHHhccc-----CCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceecc
Q 005037 254 AREKRPWHFQNFKAGAMNALIRVSSK-----ISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDN 328 (717)
Q Consensus 254 ~Rekrp~~~~~~KAGALN~al~~s~~-----~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n 328 (717)
.| ++ .++||+|||++++.... ....+++++.|||++++ |++|+ .+.++.++ + ++||.|....+
T Consensus 127 ~~---~g--~~gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v~-pd~L~-~~~~l~~~----~-~~VQ~p~~p~~ 194 (727)
T PRK11234 127 AR---PG--PTSKADCLNNVLDAITQFERSANFAFAGFILHDAEDVIS-PMELR-LFNYLVER----K-DLIQIPVYPFE 194 (727)
T ss_pred CC---CC--CCCHHHHHHHHHHHHHhhhcccCCcccEEEEEcCCCCCC-hhHHH-HHHhhcCC----C-CeEeecccCCC
Confidence 22 33 36899999999987411 12346788899999997 99998 66777765 4 89999966433
Q ss_pred CCcchhhhh----hHHHHHHHHHhhhhccCCcc-cccccceE-eh--hhhccCCCCchhhHhhhccCCCccchhhhhHHH
Q 005037 329 VTKNELYSN----SSRIFNEVELQGLDGYGCPL-YTGSGCFH-RR--EILCGSKYNKETKIEWKSKKDSKGEESLLDLEE 400 (717)
Q Consensus 329 ~~~~d~~~~----~~~~f~~~~~~g~d~~~~~~-~~Gtg~~~-RR--~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~ 400 (717)
.+.+...+. +....+...+++++.+++++ +.|+|++| || +++.+ +||
T Consensus 195 ~~~~~~~~~~~~~EFa~~~~~~~~~~~~lgg~~~l~G~~~af~Rr~l~al~~--------------~gg----------- 249 (727)
T PRK11234 195 REWTHFTSGTYIDEFAELHGKDVPVREALAGQVPSAGVGTCFSRRAVTALLE--------------DGD----------- 249 (727)
T ss_pred ccHHHHHHHHHHHHHHHHhhhhhHHHHHcCCCcccCCceEEEecccHHHHHH--------------hcC-----------
Confidence 322222222 22222334567888887764 57999999 66 45665 431
Q ss_pred hhhhcccccccccCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCC---------------------CccccccCC
Q 005037 401 TSKALASCTYERNTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPE---------------------RDAFLGVSP 459 (717)
Q Consensus 401 ~~~~v~~c~Ye~~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~---------------------~~a~~g~aP 459 (717)
..+|..+++|||+++|++|+.+||+++|++.. ..++++..|
T Consensus 250 ------------------g~~~~~~~lTED~dlg~rL~~~G~~v~f~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 311 (727)
T PRK11234 250 ------------------GIAFDVQSLTEDYDIGFRLKEKGMREIFVRFPVVDEAKEREQRKFLQHARTSNMICVREYFP 311 (727)
T ss_pred ------------------CCCcCCCcchHHHHHHHHHHHCCCEEEEcccccccccccccccccccccccccceEEEEeCc
Confidence 12799999999999999999999999999821 133677889
Q ss_pred cCHHHHHHHHHHHhcc-hHHHHH
Q 005037 460 TTLLQLLVQHKRWSEG-NFQIFI 481 (717)
Q Consensus 460 ~tl~~~~~Qr~RWa~G-~lqil~ 481 (717)
+|+++.++||.||..| .+|...
T Consensus 312 ~t~~~~~rQR~RW~~G~~~q~~~ 334 (727)
T PRK11234 312 DTFSAAVRQKSRWIIGIVFQGFK 334 (727)
T ss_pred hhHHHHHHHHHHHHcccHHHHHH
Confidence 9999999999999999 588764
No 22
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.97 E-value=1.2e-30 Score=265.47 Aligned_cols=229 Identities=33% Similarity=0.506 Sum_probs=181.5
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCchh
Q 005037 99 PGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPAA 178 (717)
Q Consensus 99 P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~ 178 (717)
|.|+|+||+|| |+++.+++++.|+++++||.++++|+|+|||++|.|.+.+.+.. .+
T Consensus 1 p~vsviip~~n---~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~----------~~---------- 57 (234)
T cd06421 1 PTVDVFIPTYN---EPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAELG----------VE---------- 57 (234)
T ss_pred CceEEEEecCC---CcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHHhh----------cc----------
Confidence 78999999999 76688999999999999998889999999999998764332210 00
Q ss_pred hhhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccC
Q 005037 179 YFINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKR 258 (717)
Q Consensus 179 yf~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekr 258 (717)
+ ++.++.++++
T Consensus 58 --------------------------------------------~-------------------------~~~~~~~~~~ 68 (234)
T cd06421 58 --------------------------------------------Y-------------------------GYRYLTRPDN 68 (234)
T ss_pred --------------------------------------------c-------------------------CceEEEeCCC
Confidence 0 1345555433
Q ss_pred CCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcch----h
Q 005037 259 PWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNE----L 334 (717)
Q Consensus 259 p~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d----~ 334 (717)
.++|+||+|.|++. +++|+|+++|+|.+++ |++|.+++..+.+. ++++.|++++.+.+.+... .
T Consensus 69 ----~~~~~~~~n~~~~~----a~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~ 136 (234)
T cd06421 69 ----RHAKAGNLNNALAH----TTGDFVAILDADHVPT-PDFLRRTLGYFLDD---PKVALVQTPQFFYNPDPFDWLADG 136 (234)
T ss_pred ----CCCcHHHHHHHHHh----CCCCEEEEEccccCcC-ccHHHHHHHHHhcC---CCeEEEecceEEecCCcchhHHHH
Confidence 57899999999998 6899999999999997 99999999999862 3799999998887654321 1
Q ss_pred hhhhHHHHHHHHHhhhhccCCcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccccccC
Q 005037 335 YSNSSRIFNEVELQGLDGYGCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYERNT 414 (717)
Q Consensus 335 ~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~t 414 (717)
+......++.....+...++...++|+++++||+++++ +|+|
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~~~--------------ig~~------------------------ 178 (234)
T cd06421 137 APNEQELFYGVIQPGRDRWGAAFCCGSGAVVRREALDE--------------IGGF------------------------ 178 (234)
T ss_pred HHHHHHHHHHHHHHHHhhcCCceecCceeeEeHHHHHH--------------hCCC------------------------
Confidence 22223344444555555566777889999999999998 6644
Q ss_pred CcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCccccccCCcCHHHHHHHHHHHhcchHHH
Q 005037 415 QWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDAFLGVSPTTLLQLLVQHKRWSEGNFQI 479 (717)
Q Consensus 415 ~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~lqi 479 (717)
+...+.||++++++++++||+++|.+.. ...+..|+++..+++||.||.+|.+|+
T Consensus 179 --------~~~~~~eD~~l~~r~~~~g~~i~~~~~~--~~~~~~~~~~~~~~~q~~rw~~~~~~~ 233 (234)
T cd06421 179 --------PTDSVTEDLATSLRLHAKGWRSVYVPEP--LAAGLAPETLAAYIKQRLRWARGMLQI 233 (234)
T ss_pred --------CccceeccHHHHHHHHHcCceEEEecCc--cccccCCccHHHHHHHHHHHhcCCeee
Confidence 4445789999999999999999999864 347899999999999999999999885
No 23
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.97 E-value=4.1e-30 Score=265.38 Aligned_cols=232 Identities=22% Similarity=0.302 Sum_probs=178.3
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCchh
Q 005037 99 PGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPAA 178 (717)
Q Consensus 99 P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~ 178 (717)
|.|+|+||+|| |+ +.+.+||.|+++++||.++++|+|+|||++|.|.+.+.+.. ++
T Consensus 1 p~vsIiIp~~N---e~-~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~----------~~---------- 56 (241)
T cd06427 1 PVYTILVPLYK---EA-EVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARALR----------LP---------- 56 (241)
T ss_pred CeEEEEEecCC---cH-HHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHHhc----------cC----------
Confidence 78999999999 55 68999999999999998889999999999999876443210 00
Q ss_pred hhhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccC
Q 005037 179 YFINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKR 258 (717)
Q Consensus 179 yf~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekr 258 (717)
+ ..+++++...+
T Consensus 57 ---------------------------------------------~----------------------~~~i~~~~~~~- 68 (241)
T cd06427 57 ---------------------------------------------S----------------------IFRVVVVPPSQ- 68 (241)
T ss_pred ---------------------------------------------C----------------------CeeEEEecCCC-
Confidence 0 00134433222
Q ss_pred CCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchh---h
Q 005037 259 PWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNEL---Y 335 (717)
Q Consensus 259 p~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~---~ 335 (717)
..+|++|+|.|++. ++||+|+++|+|++++ |+++.+++.+|.+. ++++++||++..+.+...+.. +
T Consensus 69 ----~~G~~~a~n~g~~~----a~gd~i~~~DaD~~~~-~~~l~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~ 137 (241)
T cd06427 69 ----PRTKPKACNYALAF----ARGEYVVIYDAEDAPD-PDQLKKAVAAFARL--DDKLACVQAPLNYYNARENWLTRMF 137 (241)
T ss_pred ----CCchHHHHHHHHHh----cCCCEEEEEcCCCCCC-hHHHHHHHHHHHhc--CCCEEEEeCceEeeCCCccHHHHHH
Confidence 35899999999998 6899999999999997 99999999999742 247999999887776533211 1
Q ss_pred hhhHHHHHHHHHhhhhccCCcc-cccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccccccC
Q 005037 336 SNSSRIFNEVELQGLDGYGCPL-YTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYERNT 414 (717)
Q Consensus 336 ~~~~~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~t 414 (717)
.......++...++....+.++ ++|+++++||+++++ +|
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~--------------vg-------------------------- 177 (241)
T cd06427 138 ALEYAAWFDYLLPGLARLGLPIPLGGTSNHFRTDVLRE--------------LG-------------------------- 177 (241)
T ss_pred HHHHHHHHHHHHHHHHhcCCeeecCCchHHhhHHHHHH--------------cC--------------------------
Confidence 1112233444455555555544 468889999999998 66
Q ss_pred CcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCccccccCCcCHHHHHHHHHHHhcchHHHHHh
Q 005037 415 QWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDAFLGVSPTTLLQLLVQHKRWSEGNFQIFIS 482 (717)
Q Consensus 415 ~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~lqil~~ 482 (717)
||+....+||+++++|++.+||++++++. ...+..|+|++++++||.||++|.+|++..
T Consensus 178 ------g~~~~~~~eD~~l~~rl~~~G~r~~~~~~---~~~~~~~~~~~~~~~q~~Rw~~g~~~~~~~ 236 (241)
T cd06427 178 ------GWDPFNVTEDADLGLRLARAGYRTGVLNS---TTLEEANNALGNWIRQRSRWIKGYMQTWLV 236 (241)
T ss_pred ------CCCcccchhhHHHHHHHHHCCceEEEecc---cccccCcHhHHHHHHHHHHHhccHHHHHHH
Confidence 44445678999999999999999999974 235889999999999999999999999865
No 24
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.97 E-value=6.8e-29 Score=254.12 Aligned_cols=229 Identities=25% Similarity=0.403 Sum_probs=169.7
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhH-HHHHHhhcccccchhhhhhcCCCCCCchhhh
Q 005037 102 DIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTF-YALMEASHFSTHWIPYCKKFNVEPRSPAAYF 180 (717)
Q Consensus 102 dV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~-~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf 180 (717)
+|+||||| |+++.+.+++.|+++++|| +++|+|+|||++|.|. +.+.+ +|++++
T Consensus 1 siiip~~n---e~~~~l~~~l~sl~~q~~~--~~eiiVvdd~s~D~t~~~~i~~----------~~~~~~---------- 55 (236)
T cd06435 1 SIHVPCYE---EPPEMVKETLDSLAALDYP--NFEVIVIDNNTKDEALWKPVEA----------HCAQLG---------- 55 (236)
T ss_pred CeeEeeCC---CcHHHHHHHHHHHHhCCCC--CcEEEEEeCCCCchhHHHHHHH----------HHHHhC----------
Confidence 58999999 7778999999999999999 5799999999999875 22211 111110
Q ss_pred hHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccCCC
Q 005037 181 INRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKRPW 260 (717)
Q Consensus 181 ~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekrp~ 260 (717)
+++.++..+++
T Consensus 56 -------------------------------------------------------------------~~i~~i~~~~~-- 66 (236)
T cd06435 56 -------------------------------------------------------------------ERFRFFHVEPL-- 66 (236)
T ss_pred -------------------------------------------------------------------CcEEEEEcCCC--
Confidence 12445554433
Q ss_pred CCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhhhhhHH
Q 005037 261 HFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELYSNSSR 340 (717)
Q Consensus 261 ~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~ 340 (717)
.++|++|+|.|++.+. .++|+|+++|+|..++ |++|.+++..|.++ ++++|+++..+.+...+ .+.....
T Consensus 67 --~G~~~~a~n~g~~~a~--~~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~----~~~~v~~~~~~~~~~~~-~~~~~~~ 136 (236)
T cd06435 67 --PGAKAGALNYALERTA--PDAEIIAVIDADYQVE-PDWLKRLVPIFDDP----RVGFVQAPQDYRDGEES-LFKRMCY 136 (236)
T ss_pred --CCCchHHHHHHHHhcC--CCCCEEEEEcCCCCcC-HHHHHHHHHHhcCC----CeeEEecCccccCCCcc-HHHHHHh
Confidence 4679999999999842 3589999999999997 99999999998765 69999998765543222 2211111
Q ss_pred ----HHHHHHHhhhhccCCcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccccccCCc
Q 005037 341 ----IFNEVELQGLDGYGCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYERNTQW 416 (717)
Q Consensus 341 ----~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~t~w 416 (717)
.++..........+..++.|+++++||+++.+ +||
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~--------------iGg--------------------------- 175 (236)
T cd06435 137 AEYKGFFDIGMVSRNERNAIIQHGTMCLIRRSALDD--------------VGG--------------------------- 175 (236)
T ss_pred HHHHHHHHHHhccccccCceEEecceEEEEHHHHHH--------------hCC---------------------------
Confidence 11111112223333445679999999999998 764
Q ss_pred CcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCccccccCCcCHHHHHHHHHHHhcchHHHHHh
Q 005037 417 GKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDAFLGVSPTTLLQLLVQHKRWSEGNFQIFIS 482 (717)
Q Consensus 417 G~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~lqil~~ 482 (717)
|+.+...||+++++|++.+||++.|++.. ..+...|+|+.++++||.||++|++|++.+
T Consensus 176 -----f~~~~~~eD~dl~~r~~~~G~~~~~~~~~--~~~~~~~~~~~~~~~q~~rw~~g~~~~~~~ 234 (236)
T cd06435 176 -----WDEWCITEDSELGLRMHEAGYIGVYVAQS--YGHGLIPDTFEAFKKQRFRWAYGAVQILKK 234 (236)
T ss_pred -----CCCccccchHHHHHHHHHCCcEEEEcchh--hccCcCcccHHHHHHHHHHHhcchhhhhhc
Confidence 44445789999999999999999999853 337899999999999999999999999853
No 25
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.95 E-value=4.4e-29 Score=253.95 Aligned_cols=224 Identities=27% Similarity=0.362 Sum_probs=141.7
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCchh
Q 005037 99 PGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPAA 178 (717)
Q Consensus 99 P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~ 178 (717)
|.|+|+||+|| |+ +.+.++|.|+++++|| +++|+|+||++++.|.+.+.+. +.+
T Consensus 1 P~v~Vvip~~~---~~-~~l~~~l~sl~~~~~~--~~~v~vvd~~~~~~~~~~~~~~----------~~~---------- 54 (228)
T PF13641_consen 1 PRVSVVIPAYN---ED-DVLRRCLESLLAQDYP--RLEVVVVDDGSDDETAEILRAL----------AAR---------- 54 (228)
T ss_dssp --EEEE--BSS----H-HHHHHHHHHHTTSHHH--TEEEEEEEE-SSS-GCTTHHHH----------HHT----------
T ss_pred CEEEEEEEecC---CH-HHHHHHHHHHHcCCCC--CeEEEEEECCCChHHHHHHHHH----------HHH----------
Confidence 78999999999 66 4999999999999996 6999999999998764322221 111
Q ss_pred hhhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccC
Q 005037 179 YFINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKR 258 (717)
Q Consensus 179 yf~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekr 258 (717)
+|. . .+.++.++++
T Consensus 55 ---------------------------------------------~~~----------------~-----~v~vi~~~~~ 68 (228)
T PF13641_consen 55 ---------------------------------------------YPR----------------V-----RVRVIRRPRN 68 (228)
T ss_dssp ---------------------------------------------TGG----------------------GEEEEE----
T ss_pred ---------------------------------------------cCC----------------C-----ceEEeecCCC
Confidence 000 0 1566666543
Q ss_pred CCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhhhhh
Q 005037 259 PWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELYSNS 338 (717)
Q Consensus 259 p~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~ 338 (717)
++ .++|++|+|.+++. .++|+|+++|+|++++ |++|++++.+|.++ ++++||++..+.+ +++ .+...
T Consensus 69 ~g--~~~k~~a~n~~~~~----~~~d~i~~lD~D~~~~-p~~l~~~~~~~~~~----~~~~v~~~~~~~~-~~~-~~~~~ 135 (228)
T PF13641_consen 69 PG--PGGKARALNEALAA----ARGDYILFLDDDTVLD-PDWLERLLAAFADP----GVGAVGGPVFPDN-DRN-WLTRL 135 (228)
T ss_dssp HH--HHHHHHHHHHHHHH-------SEEEEE-SSEEE--CHHHHHHHHHHHBS----S--EEEEEEEETT-CCC-EEEE-
T ss_pred CC--cchHHHHHHHHHHh----cCCCEEEEECCCcEEC-HHHHHHHHHHHHhC----CCCeEeeeEeecC-CCC-HHHHH
Confidence 21 24799999999998 5799999999999996 99999999999776 6999998886654 222 11111
Q ss_pred HHHHHH----HHHhhhhccCCcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccccccC
Q 005037 339 SRIFNE----VELQGLDGYGCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYERNT 414 (717)
Q Consensus 339 ~~~f~~----~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~t 414 (717)
...++. ....+....+..+++|+++++||+++++ +|
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~~~~--------------~g-------------------------- 175 (228)
T PF13641_consen 136 QDLFFARWHLRFRSGRRALGVAFLSGSGMLFRRSALEE--------------VG-------------------------- 175 (228)
T ss_dssp TT--S-EETTTS-TT-B----S-B--TEEEEEHHHHHH--------------H---------------------------
T ss_pred HHHHHhhhhhhhhhhhcccceeeccCcEEEEEHHHHHH--------------hC--------------------------
Confidence 111211 1122333444566789999999999998 65
Q ss_pred CcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCccccccCCcCHHHHHHHHHHHhcc
Q 005037 415 QWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDAFLGVSPTTLLQLLVQHKRWSEG 475 (717)
Q Consensus 415 ~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G 475 (717)
||+.....||.+++++++++||+++|++. ...+...|.|++++++||.||++|
T Consensus 176 ------~fd~~~~~eD~~l~~r~~~~G~~~~~~~~--~~v~~~~~~~~~~~~~q~~RW~~g 228 (228)
T PF13641_consen 176 ------GFDPFILGEDFDLCLRLRAAGWRIVYAPD--ALVYHEEPSSLKAFFKQRFRWSRG 228 (228)
T ss_dssp ------S--SSSSSHHHHHHHHHHHTT--EEEEEE--EEEEE--SSSTHHHHHHHHHHH--
T ss_pred ------CCCCCCcccHHHHHHHHHHCCCcEEEECC--cEEEEeCCCCHHHHHHHHhccCcC
Confidence 44445678999999999999999999984 345789999999999999999987
No 26
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.95 E-value=1.6e-26 Score=254.63 Aligned_cols=231 Identities=16% Similarity=0.171 Sum_probs=165.3
Q ss_pred CCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCC
Q 005037 96 DKLPGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRS 175 (717)
Q Consensus 96 ~~~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~ 175 (717)
+..|+|+|+||+|| |+ +.+.+|+.|++++|||. +||+|+||+++|.|.+.+.+.. +
T Consensus 38 ~~~p~VSViiP~~n---ee-~~l~~~L~Sl~~q~Yp~--~EIivvdd~s~D~t~~iv~~~~----------~-------- 93 (373)
T TIGR03472 38 RAWPPVSVLKPLHG---DE-PELYENLASFCRQDYPG--FQMLFGVQDPDDPALAVVRRLR----------A-------- 93 (373)
T ss_pred CCCCCeEEEEECCC---CC-hhHHHHHHHHHhcCCCC--eEEEEEeCCCCCcHHHHHHHHH----------H--------
Confidence 44799999999999 55 47899999999999994 8999999999998865443321 0
Q ss_pred chhhhhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEee
Q 005037 176 PAAYFINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAR 255 (717)
Q Consensus 176 p~~yf~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~R 255 (717)
+||. .++.++..
T Consensus 94 -----------------------------------------------~~p~---------------------~~i~~v~~ 105 (373)
T TIGR03472 94 -----------------------------------------------DFPD---------------------ADIDLVID 105 (373)
T ss_pred -----------------------------------------------hCCC---------------------CceEEEEC
Confidence 0110 12455544
Q ss_pred ccCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhh
Q 005037 256 EKRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELY 335 (717)
Q Consensus 256 ekrp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~ 335 (717)
+++.| .++|++|+|++++. +++|+++++|||++++ ||+|++++..|.|| +++.|+++....+. +...
T Consensus 106 ~~~~G--~~~K~~~l~~~~~~----a~ge~i~~~DaD~~~~-p~~L~~lv~~~~~~----~v~~V~~~~~~~~~--~~~~ 172 (373)
T TIGR03472 106 ARRHG--PNRKVSNLINMLPH----ARHDILVIADSDISVG-PDYLRQVVAPLADP----DVGLVTCLYRGRPV--PGFW 172 (373)
T ss_pred CCCCC--CChHHHHHHHHHHh----ccCCEEEEECCCCCcC-hhHHHHHHHHhcCC----CcceEeccccCCCC--CCHH
Confidence 33332 45799999999887 6999999999999997 99999999999876 69999986432221 1111
Q ss_pred hhhHHHHHHH-HHhh---hhccCC-cccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccc
Q 005037 336 SNSSRIFNEV-ELQG---LDGYGC-PLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTY 410 (717)
Q Consensus 336 ~~~~~~f~~~-~~~g---~d~~~~-~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Y 410 (717)
......+.+. ..++ .+..+. .++.|+++++||+++++ +|||++.
T Consensus 173 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~a~RR~~l~~--------------iGGf~~~----------------- 221 (373)
T TIGR03472 173 SRLGAMGINHNFLPSVMVARALGRARFCFGATMALRRATLEA--------------IGGLAAL----------------- 221 (373)
T ss_pred HHHHHHHhhhhhhHHHHHHHhccCCccccChhhheeHHHHHH--------------cCChHHh-----------------
Confidence 1111111110 1111 111222 34679999999999999 8876531
Q ss_pred cccCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCccccccCCcCHHHHHHHHHHHhcchH
Q 005037 411 ERNTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDAFLGVSPTTLLQLLVQHKRWSEGNF 477 (717)
Q Consensus 411 e~~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~l 477 (717)
.++++||++++.+++++||++.+++.. ..+...|+|++++++||.||++...
T Consensus 222 -------------~~~~~ED~~l~~~i~~~G~~v~~~~~~--v~~~~~~~s~~~~~~q~~RW~r~~~ 273 (373)
T TIGR03472 222 -------------AHHLADDYWLGELVRALGLRVVLAPVV--VDTDVHETSFATLLAHELRWSRTIR 273 (373)
T ss_pred -------------cccchHHHHHHHHHHHcCCeEEecchh--hhcCCCccCHHHHHHHHHHHHhhhh
Confidence 135789999999999999999998742 3357788999999999999985544
No 27
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.95 E-value=2.6e-27 Score=245.76 Aligned_cols=172 Identities=17% Similarity=0.061 Sum_probs=114.0
Q ss_pred HHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhh-ccCCCCeEEEEeccceeccCCcchhhhhhHHHHHH---
Q 005037 269 AMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFI-DEEKGHEVAFVQFPQNFDNVTKNELYSNSSRIFNE--- 344 (717)
Q Consensus 269 ALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~-d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~--- 344 (717)
++|.++.. +++|+|+++|||++++ |++|++++.+|. || ++|.|++.+...|...+ .....+...|.
T Consensus 64 ~~~~~~~~----a~~e~i~~~DaD~~~~-~~~l~~l~~~~~~~p----~vg~v~g~~~~~~~~~~-~~~~~q~~ey~~~~ 133 (244)
T cd04190 64 YFCRVLFP----DDPEFILLVDADTKFD-PDSIVQLYKAMDKDP----EIGGVCGEIHPMGKKQG-PLVMYQVFEYAISH 133 (244)
T ss_pred HHHHHhhc----CCCCEEEEECCCCcCC-HhHHHHHHHHHHhCC----CEEEEEeeeEEcCCcch-hHHHhHheehhhhh
Confidence 45666654 6899999999999997 999999999984 65 79999998877664323 12221221121
Q ss_pred HHH-hhhhccCCc-ccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccccccCCcCccccc
Q 005037 345 VEL-QGLDGYGCP-LYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYERNTQWGKEMGL 422 (717)
Q Consensus 345 ~~~-~g~d~~~~~-~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~t~wG~~~G~ 422 (717)
... .....++.. .+.|+++++|++++++ +|+.... +..+.|...+.-. ..+.
T Consensus 134 ~~~~~~~s~~g~~~~~~G~~~~~R~~~l~~--------------~~~~~~~-----------~~~~~~~~~~~~~-~~~~ 187 (244)
T cd04190 134 WLDKAFESVFGFVTCLPGCFSMYRIEALKG--------------DNGGKGP-----------LLDYAYLTNTVDS-LHKK 187 (244)
T ss_pred hhcccHHHcCCceEECCCceEEEEehhhcC--------------Ccccccc-----------chhhccccCcccc-hHHH
Confidence 111 222333433 4569999999999998 4321100 0000000000000 0122
Q ss_pred CCCCCcchHHHHHHHHhcCCeEEE--eCCCCccccccCCcCHHHHHHHHHHHhcchHH
Q 005037 423 KYGCPAEDVVTGLSIQSRGWKSVY--SKPERDAFLGVSPTTLLQLLVQHKRWSEGNFQ 478 (717)
Q Consensus 423 ~~~svtED~~t~~rl~~~Gwrsvy--~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~lq 478 (717)
...+++||.+++++|..+||++.| ++.. .+++++|+|++++++||.||++|++.
T Consensus 188 ~~~~~~ED~~l~~~l~~~G~~~~~~~~~~a--~~~~~~p~s~~~~~~QR~RW~~g~~~ 243 (244)
T cd04190 188 NNLDLGEDRILCTLLLKAGPKRKYLYVPGA--VAETDVPETFVELLSQRRRWINSTIA 243 (244)
T ss_pred HHHhHhcccceeHHHhccCCccEEEEeccc--EEEEECCCCHHHHHHHhHhhhccccc
Confidence 234689999999999999999999 7753 44799999999999999999999863
No 28
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.94 E-value=6.1e-25 Score=254.85 Aligned_cols=239 Identities=14% Similarity=0.157 Sum_probs=168.7
Q ss_pred cCCCCceEEEEecCCCCCCChHHHHHHHHHHH-cCCCCCCCeEEEE---EeCCCChhhHHHHHHhhcccccchhhhhhcC
Q 005037 95 EDKLPGVDIFVCTADPKIEPPMMVINTVLSVM-AYDYPTDKLSVYL---SDDASSDLTFYALMEASHFSTHWIPYCKKFN 170 (717)
Q Consensus 95 ~~~~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~l-a~dYP~~kl~v~V---~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~ 170 (717)
+.+.|.|+|+||+|| |. +++.+||.+++ ++||| +++|+| .||+.|. +++.+.+.
T Consensus 67 ~~~~~~vsIlVPa~n---E~-~VI~~~v~~ll~~ldYp--~~~I~v~~~~nD~~T~---~~~~~~~~------------- 124 (703)
T PRK15489 67 ERDEQPLAIMVPAWK---EY-DVIAKMIENMLATLDYR--RYVIFVGTYPNDAETI---TEVERMRR------------- 124 (703)
T ss_pred ccCCCceEEEEeCCC---cH-HHHHHHHHHHHhcCCCC--CeEEEEEecCCCccHH---HHHHHHhc-------------
Confidence 456799999999999 54 79999999986 89999 678999 5777443 32222110
Q ss_pred CCCCCchhhhhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeE
Q 005037 171 VEPRSPAAYFINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTL 250 (717)
Q Consensus 171 v~~r~p~~yf~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l 250 (717)
+.|++
T Consensus 125 ---------------------------------------------------------------------------~~p~~ 129 (703)
T PRK15489 125 ---------------------------------------------------------------------------RYKRL 129 (703)
T ss_pred ---------------------------------------------------------------------------cCCcE
Confidence 12334
Q ss_pred EEEeeccCCCCCCCChHHHHHHHHHhcc--c-CCCccE--EEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccce
Q 005037 251 VYLAREKRPWHFQNFKAGAMNALIRVSS--K-ISNGQV--ILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQN 325 (717)
Q Consensus 251 ~yv~Rekrp~~~~~~KAGALN~al~~s~--~-~t~gd~--Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~ 325 (717)
.-|..++ + ...+||.|||.+++..- . ...++| ++++|||.+|+ |+.|+.. .++.+. -.+||.|..
T Consensus 130 ~~v~~~~-~--gp~gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd~~~-P~~L~~~-~~~~~~-----~~~iQ~pV~ 199 (703)
T PRK15489 130 VRVEVPH-D--GPTCKADCLNWIIQAIFRYEAGHGIEFAGVILHDSEDVLH-PLELKYF-NYLLPR-----KDLVQLPVL 199 (703)
T ss_pred EEEEcCC-C--CCCCHHHHHHHHHHHHHhhhhhccCccceEEEEcCCCCCC-hhHHHHH-HhhcCC-----cceeeeeec
Confidence 4343322 1 24789999999998631 0 113344 99999999997 9999754 566543 146898742
Q ss_pred -eccCCcc---hhhhhhHHHHHHHHHhhhhccCCccc-ccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHH
Q 005037 326 -FDNVTKN---ELYSNSSRIFNEVELQGLDGYGCPLY-TGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEE 400 (717)
Q Consensus 326 -f~n~~~~---d~~~~~~~~f~~~~~~g~d~~~~~~~-~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~ 400 (717)
..|...+ ..|..+....++..+.++..+++++. .|+|++|||++|+++.. .||.
T Consensus 200 ~~~~~~~~~l~~~~~~Efa~~~~~~l~~r~~l~~~ipl~Gv~~~frr~aL~~l~~-----------~gg~---------- 258 (703)
T PRK15489 200 SLERKWYEWVAGTYMDEFAEWHQKDLVVRESLTGTVPSAGVGTCFSRRALLALMK-----------ERGN---------- 258 (703)
T ss_pred cCCCccccHHHHHHHHHHHHHhhhHHHHHHHcCCceeccCcceeeeHHHHHHHHH-----------hcCC----------
Confidence 2222112 12444555566777888888888774 79999999999876100 1211
Q ss_pred hhhhcccccccccCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCC---------------------CCccccccCC
Q 005037 401 TSKALASCTYERNTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKP---------------------ERDAFLGVSP 459 (717)
Q Consensus 401 ~~~~v~~c~Ye~~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~---------------------~~~a~~g~aP 459 (717)
.+|+.+|+|||+++|+||+++|||+.|+.- ...+..+..|
T Consensus 259 -------------------~~~n~~sLTED~Dlg~RL~~~G~r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~tre~fP 319 (703)
T PRK15489 259 -------------------QPFNTSSLTEDYDFSFRLAELGMQEIFVRFPVQFRVRRTSWFGPRRERTREMLLCVREYFP 319 (703)
T ss_pred -------------------CCCCCCCchHhHHHHHHHHHCCCceEEEEEeccccccccccccccccccccCceeehhhCc
Confidence 268889999999999999999999999321 1246678899
Q ss_pred cCHHHHHHHHHHHhcchH-HHH
Q 005037 460 TTLLQLLVQHKRWSEGNF-QIF 480 (717)
Q Consensus 460 ~tl~~~~~Qr~RWa~G~l-qil 480 (717)
.|+++.++||.||..|-. |-.
T Consensus 320 ~~~~a~~rQk~RW~~Gi~~q~~ 341 (703)
T PRK15489 320 DTFRTAYRQKARWVLGIAFQGW 341 (703)
T ss_pred HHHHHHHHHHHHHHhHHHHhhH
Confidence 999999999999999987 664
No 29
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.94 E-value=1.8e-25 Score=226.14 Aligned_cols=224 Identities=23% Similarity=0.239 Sum_probs=163.1
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCchhhhhH
Q 005037 103 IFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPAAYFIN 182 (717)
Q Consensus 103 V~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 182 (717)
|+||||| |+ +.+.+||.|+++++||.++++|+|+|||++|.|.+.+.... +.
T Consensus 1 viip~~n---~~-~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~-----------~~------------- 52 (229)
T cd04192 1 VVIAARN---EA-ENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILEFAA-----------AK------------- 52 (229)
T ss_pred CEEEecC---cH-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHHHHH-----------hC-------------
Confidence 6899999 65 68999999999999998889999999999998865333100 00
Q ss_pred HHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccCCCCC
Q 005037 183 RLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKRPWHF 262 (717)
Q Consensus 183 ~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekrp~~~ 262 (717)
..|++.++.++. + .
T Consensus 53 ---------------------------------------------------------------~~~~v~~~~~~~-~--~ 66 (229)
T cd04192 53 ---------------------------------------------------------------PNFQLKILNNSR-V--S 66 (229)
T ss_pred ---------------------------------------------------------------CCcceEEeeccC-c--c
Confidence 012355554432 1 2
Q ss_pred CCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhhhhhHH--
Q 005037 263 QNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELYSNSSR-- 340 (717)
Q Consensus 263 ~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~-- 340 (717)
..+|+.|+|.+++. +++|+|+++|+|+++. |++|++++..+.++ ..+.|+++..+...+ ........
T Consensus 67 ~~g~~~a~n~g~~~----~~~d~i~~~D~D~~~~-~~~l~~l~~~~~~~----~~~~v~~~~~~~~~~--~~~~~~~~~~ 135 (229)
T cd04192 67 ISGKKNALTTAIKA----AKGDWIVTTDADCVVP-SNWLLTFVAFIQKE----QIGLVAGPVIYFKGK--SLLAKFQRLD 135 (229)
T ss_pred cchhHHHHHHHHHH----hcCCEEEEECCCcccC-HHHHHHHHHHhhcC----CCcEEeeeeeecCCc--cHHHHHHHHH
Confidence 47899999999998 6899999999999997 99999999988765 467788877655221 11111111
Q ss_pred -HHHHHHHhhhhccCCc-ccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccccccCCcCc
Q 005037 341 -IFNEVELQGLDGYGCP-LYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYERNTQWGK 418 (717)
Q Consensus 341 -~f~~~~~~g~d~~~~~-~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~t~wG~ 418 (717)
........+...++.+ .++|+++++||+++++ +|||++.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~--------------~ggf~~~------------------------- 176 (229)
T cd04192 136 WLSLLGLIAGSFGLGKPFMCNGANMAYRKEAFFE--------------VGGFEGN------------------------- 176 (229)
T ss_pred HHHHHHHHhhHHHhcCccccccceEEEEHHHHHH--------------hcCCccc-------------------------
Confidence 1111122223334444 4578889999999998 7766532
Q ss_pred ccccCCCCCcchHHHHHHHHhcCC-eEEEeCCCCccccccCCcCHHHHHHHHHHHhcc
Q 005037 419 EMGLKYGCPAEDVVTGLSIQSRGW-KSVYSKPERDAFLGVSPTTLLQLLVQHKRWSEG 475 (717)
Q Consensus 419 ~~G~~~~svtED~~t~~rl~~~Gw-rsvy~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G 475 (717)
....+||.++.++++++|| ++.|++.+....+...|.+++++++||+||++|
T Consensus 177 -----~~~~~eD~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~Rw~~g 229 (229)
T cd04192 177 -----DHIASGDDELLLAKVASKYPKVAYLKNPEALVTTQPVTSWKELLNQRKRWASK 229 (229)
T ss_pred -----cccccCCHHHHHHHHHhCCCCEEEeeCcchheecCCchhHHHHHHHHHHhhcC
Confidence 1246899999999999999 998875433455788999999999999999987
No 30
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.94 E-value=7.5e-26 Score=226.33 Aligned_cols=195 Identities=19% Similarity=0.208 Sum_probs=153.3
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCchh
Q 005037 99 PGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPAA 178 (717)
Q Consensus 99 P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~ 178 (717)
|.|+|+||+|| |+. .+.++|.|+++++||. ++|+|+|||++|.|.+.+.+.. ++
T Consensus 1 p~vsviip~~n---~~~-~l~~~L~sl~~q~~~~--~eiivVdd~s~d~t~~~~~~~~----------~~---------- 54 (196)
T cd02520 1 PGVSILKPLCG---VDP-NLYENLESFFQQDYPK--YEILFCVQDEDDPAIPVVRKLI----------AK---------- 54 (196)
T ss_pred CCeEEEEecCC---CCc-cHHHHHHHHHhccCCC--eEEEEEeCCCcchHHHHHHHHH----------HH----------
Confidence 78999999999 443 5899999999999994 8999999999998875444321 11
Q ss_pred hhhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccC
Q 005037 179 YFINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKR 258 (717)
Q Consensus 179 yf~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekr 258 (717)
|+.+ .+.++..+++
T Consensus 55 ---------------------------------------------~~~~---------------------~~~~~~~~~~ 68 (196)
T cd02520 55 ---------------------------------------------YPNV---------------------DARLLIGGEK 68 (196)
T ss_pred ---------------------------------------------CCCC---------------------cEEEEecCCc
Confidence 0000 1334433332
Q ss_pred CCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhhhhh
Q 005037 259 PWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELYSNS 338 (717)
Q Consensus 259 p~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~ 338 (717)
.| ..+|++|+|.|++. ++||+++++|+|+.++ |++|++++..+.++ ++++|++.
T Consensus 69 ~g--~~~~~~~~n~g~~~----a~~d~i~~~D~D~~~~-~~~l~~l~~~~~~~----~~~~v~~~--------------- 122 (196)
T cd02520 69 VG--INPKVNNLIKGYEE----ARYDILVISDSDISVP-PDYLRRMVAPLMDP----GVGLVTCL--------------- 122 (196)
T ss_pred CC--CCHhHHHHHHHHHh----CCCCEEEEECCCceEC-hhHHHHHHHHhhCC----CCCeEEee---------------
Confidence 22 34699999999998 6899999999999996 99999999998776 58888764
Q ss_pred HHHHHHHHHhhhhccCCcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccccccCCcCc
Q 005037 339 SRIFNEVELQGLDGYGCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYERNTQWGK 418 (717)
Q Consensus 339 ~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~t~wG~ 418 (717)
++.|+++++||+++++ +|||+..
T Consensus 123 ------------------~~~g~~~~~r~~~~~~--------------~ggf~~~------------------------- 145 (196)
T cd02520 123 ------------------CAFGKSMALRREVLDA--------------IGGFEAF------------------------- 145 (196)
T ss_pred ------------------cccCceeeeEHHHHHh--------------ccChHHH-------------------------
Confidence 4678999999999998 7766321
Q ss_pred ccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCccccccCCcCHHHHHHHHHHHhcc
Q 005037 419 EMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDAFLGVSPTTLLQLLVQHKRWSEG 475 (717)
Q Consensus 419 ~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G 475 (717)
...+.||+++++++..+||++.|++.. ..+...|.+++++++||.||++.
T Consensus 146 -----~~~~~eD~~l~~rl~~~G~~i~~~~~~--~~~~~~~~~~~~~~~q~~rw~~~ 195 (196)
T cd02520 146 -----ADYLAEDYFLGKLIWRLGYRVVLSPYV--VMQPLGSTSLASFWRRQLRWSRT 195 (196)
T ss_pred -----hHHHHHHHHHHHHHHHcCCeEEEcchh--eeccCCcccHHHHHHHHHHHhcc
Confidence 113589999999999999999999753 45789999999999999999864
No 31
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.93 E-value=1.5e-24 Score=221.46 Aligned_cols=228 Identities=21% Similarity=0.223 Sum_probs=161.7
Q ss_pred ceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCchhh
Q 005037 100 GVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPAAY 179 (717)
Q Consensus 100 ~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~y 179 (717)
+|+|+||||| |+++.+.+|+.|+.+++ | .+|+|+|||++|.|.+.+.+..+
T Consensus 1 ~isVvIp~~n---e~~~~l~~~l~sl~~q~-~---~eiivvdd~s~d~~~~~l~~~~~---------------------- 51 (235)
T cd06434 1 DVTVIIPVYD---EDPDVFRECLRSILRQK-P---LEIIVVTDGDDEPYLSILSQTVK---------------------- 51 (235)
T ss_pred CeEEEEeecC---CChHHHHHHHHHHHhCC-C---CEEEEEeCCCChHHHHHHHhhcc----------------------
Confidence 4899999999 77679999999999999 4 57999999999987654422100
Q ss_pred hhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccCC
Q 005037 180 FINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKRP 259 (717)
Q Consensus 180 f~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekrp 259 (717)
+ |.+.++. ++
T Consensus 52 --------------------------------------------~-----------------------~~~~v~~-~~-- 61 (235)
T cd06434 52 --------------------------------------------Y-----------------------GGIFVIT-VP-- 61 (235)
T ss_pred --------------------------------------------C-----------------------CcEEEEe-cC--
Confidence 0 1133332 22
Q ss_pred CCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhhhhhH
Q 005037 260 WHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELYSNSS 339 (717)
Q Consensus 260 ~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~ 339 (717)
+.+|++|+|.+++. +++|+|+++|+|+++. |++|++++..|.|+ +++.|++.+.+.+.+.+ .+....
T Consensus 62 ---~~g~~~a~n~g~~~----a~~d~v~~lD~D~~~~-~~~l~~l~~~~~~~----~v~~v~~~~~~~~~~~~-~~~~~~ 128 (235)
T cd06434 62 ---HPGKRRALAEGIRH----VTTDIVVLLDSDTVWP-PNALPEMLKPFEDP----KVGGVGTNQRILRPRDS-KWSFLA 128 (235)
T ss_pred ---CCChHHHHHHHHHH----hCCCEEEEECCCceeC-hhHHHHHHHhccCC----CEeEEcCceEeecCccc-HHHHHH
Confidence 46899999999998 6899999999999997 99999999999866 69999998877665322 111111
Q ss_pred HHHHHH----HHhhhhccCCc-ccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccccccC
Q 005037 340 RIFNEV----ELQGLDGYGCP-LYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYERNT 414 (717)
Q Consensus 340 ~~f~~~----~~~g~d~~~~~-~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~t 414 (717)
..+++. ........++. .+.|.++++||+++++..+......++ .
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~~~~~~~~~~~---~--------------------------- 178 (235)
T cd06434 129 AEYLERRNEEIRAAMSYDGGVPCLSGRTAAYRTEILKDFLFLEEFTNET---F--------------------------- 178 (235)
T ss_pred HHHHHHHHHHHHHHHhhCCCEEEccCcHHHHHHHHHhhhhhHHHhhhhh---h---------------------------
Confidence 122211 11222223332 346788899999998732211110000 0
Q ss_pred CcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCccccccCCcCHHHHHHHHHHHhcchH
Q 005037 415 QWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDAFLGVSPTTLLQLLVQHKRWSEGNF 477 (717)
Q Consensus 415 ~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~l 477 (717)
+|.. ....||.+++.+++++||+.+|++.. .+ +..+|.++.++++||.||++|..
T Consensus 179 -----~~~~-~~~~eD~~l~~~~~~~g~~~~~~~~~-~~-~~~~~~~~~~~~~q~~Rw~~~~~ 233 (235)
T cd06434 179 -----MGRR-LNAGDDRFLTRYVLSHGYKTVYQYTS-EA-YTETPENYKKFLKQQLRWSRSNW 233 (235)
T ss_pred -----cCCC-CCcCchHHHHHHHHHCCCeEEEecCC-eE-EEEcchhHHHHHHHhhhhhhccc
Confidence 1221 24689999999999999999999854 34 56799999999999999999975
No 32
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.92 E-value=4.6e-23 Score=228.09 Aligned_cols=238 Identities=18% Similarity=0.094 Sum_probs=158.1
Q ss_pred cCCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCC
Q 005037 95 EDKLPGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPR 174 (717)
Q Consensus 95 ~~~~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r 174 (717)
++..|+|+|+||+|| |+ +.+.+|+.|++++|||. +++|+|+||||+|.|.+.+.+.. ++
T Consensus 36 ~~~~p~VSVIIpa~N---e~-~~L~~~L~sL~~q~yp~-~~eIIVVDd~StD~T~~i~~~~~----------~~------ 94 (384)
T TIGR03469 36 PEAWPAVVAVVPARN---EA-DVIGECVTSLLEQDYPG-KLHVILVDDHSTDGTADIARAAA----------RA------ 94 (384)
T ss_pred CCCCCCEEEEEecCC---cH-hHHHHHHHHHHhCCCCC-ceEEEEEeCCCCCcHHHHHHHHH----------Hh------
Confidence 356899999999999 54 68999999999999996 48999999999999876444321 00
Q ss_pred CchhhhhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEe
Q 005037 175 SPAAYFINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLA 254 (717)
Q Consensus 175 ~p~~yf~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~ 254 (717)
+|. -+++.+++
T Consensus 95 -------------------------------------------------~~~--------------------~~~i~vi~ 105 (384)
T TIGR03469 95 -------------------------------------------------YGR--------------------GDRLTVVS 105 (384)
T ss_pred -------------------------------------------------cCC--------------------CCcEEEec
Confidence 000 01244454
Q ss_pred eccCCCCCCCChHHHHHHHHHhcccC-CCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcch
Q 005037 255 REKRPWHFQNFKAGAMNALIRVSSKI-SNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNE 333 (717)
Q Consensus 255 Rekrp~~~~~~KAGALN~al~~s~~~-t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d 333 (717)
.+.+|. ...+|+.|+|.+++.+... .++|+++++|||+.++ |+++++++..+.++ ++++|.+..++...+...
T Consensus 106 ~~~~~~-g~~Gk~~A~n~g~~~A~~~~~~gd~llflDaD~~~~-p~~l~~lv~~~~~~----~~~~vs~~~~~~~~~~~~ 179 (384)
T TIGR03469 106 GQPLPP-GWSGKLWAVSQGIAAARTLAPPADYLLLTDADIAHG-PDNLARLVARARAE----GLDLVSLMVRLRCESFWE 179 (384)
T ss_pred CCCCCC-CCcchHHHHHHHHHHHhccCCCCCEEEEECCCCCCC-hhHHHHHHHHHHhC----CCCEEEecccccCCCHHH
Confidence 333222 2468999999999984111 1199999999999997 99999999999875 355665443332211000
Q ss_pred h-hhhhHHHHHHHHHh---hhhcc-CCcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccc
Q 005037 334 L-YSNSSRIFNEVELQ---GLDGY-GCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASC 408 (717)
Q Consensus 334 ~-~~~~~~~f~~~~~~---g~d~~-~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c 408 (717)
. .......++....+ ..+.. ......|++.++||+++++ +||+++..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~lirr~~~~~--------------vGGf~~~~-------------- 231 (384)
T TIGR03469 180 KLLIPAFVFFFQKLYPFRWVNDPRRRTAAAAGGCILIRREALER--------------IGGIAAIR-------------- 231 (384)
T ss_pred HHHHHHHHHHHHHhcchhhhcCCCccceeecceEEEEEHHHHHH--------------cCCHHHHh--------------
Confidence 0 00000111111110 11111 1223578899999999998 88775421
Q ss_pred cccccCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCccccccCCcCHHHHHHHHHHHh
Q 005037 409 TYERNTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDAFLGVSPTTLLQLLVQHKRWS 473 (717)
Q Consensus 409 ~Ye~~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a~~g~aP~tl~~~~~Qr~RWa 473 (717)
..+.||++++.+++++|+++.+..... ......-+++++.++|+.||.
T Consensus 232 ----------------~~~~ED~~L~~r~~~~G~~v~~~~~~~-~~s~r~~~~~~~~~~~~~r~~ 279 (384)
T TIGR03469 232 ----------------GALIDDCTLAAAVKRSGGRIWLGLAAR-TRSLRPYDGLGEIWRMIARTA 279 (384)
T ss_pred ----------------hCcccHHHHHHHHHHcCCcEEEEecCc-eEEEEecCCHHHHHHHHHHhH
Confidence 246899999999999999999986532 222344568999999999995
No 33
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.91 E-value=2.2e-23 Score=215.36 Aligned_cols=224 Identities=21% Similarity=0.230 Sum_probs=163.1
Q ss_pred cCCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCC
Q 005037 95 EDKLPGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPR 174 (717)
Q Consensus 95 ~~~~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r 174 (717)
.+..|.++|+||+|| |+ ..+.+++.|+.+++||.++++|+|+|||++|.|.+.+.+-. ++
T Consensus 25 ~~~~~~isVvip~~n---~~-~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~----------~~------ 84 (251)
T cd06439 25 PAYLPTVTIIIPAYN---EE-AVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIAREYA----------DK------ 84 (251)
T ss_pred CCCCCEEEEEEecCC---cH-HHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHHHh----------hC------
Confidence 456899999999999 54 68999999999999998889999999999998764332210 00
Q ss_pred CchhhhhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEe
Q 005037 175 SPAAYFINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLA 254 (717)
Q Consensus 175 ~p~~yf~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~ 254 (717)
++.++.
T Consensus 85 --------------------------------------------------------------------------~v~~i~ 90 (251)
T cd06439 85 --------------------------------------------------------------------------GVKLLR 90 (251)
T ss_pred --------------------------------------------------------------------------cEEEEE
Confidence 133443
Q ss_pred eccCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchh
Q 005037 255 REKRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNEL 334 (717)
Q Consensus 255 Rekrp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~ 334 (717)
.++ ..+|++|+|.+++. +++|+++++|+|++++ |+++++++..+.++ ++++|++.....+.+. ..
T Consensus 91 ~~~-----~~g~~~a~n~gi~~----a~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~----~~~~v~~~~~~~~~~~-~~ 155 (251)
T cd06439 91 FPE-----RRGKAAALNRALAL----ATGEIVVFTDANALLD-PDALRLLVRHFADP----SVGAVSGELVIVDGGG-SG 155 (251)
T ss_pred cCC-----CCChHHHHHHHHHH----cCCCEEEEEccccCcC-HHHHHHHHHHhcCC----CccEEEeEEEecCCcc-cc
Confidence 332 36799999999998 6789999999999997 99999999999765 6888888766544321 00
Q ss_pred hhhh-HHHHHHHHHhhhhccCC-cccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccccc
Q 005037 335 YSNS-SRIFNEVELQGLDGYGC-PLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYER 412 (717)
Q Consensus 335 ~~~~-~~~f~~~~~~g~d~~~~-~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~ 412 (717)
.... ...+...........+. ....|++.++||+++.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~---------------------------------------- 195 (251)
T cd06439 156 SGEGLYWKYENWLKRAESRLGSTVGANGAIYAIRRELFRP---------------------------------------- 195 (251)
T ss_pred hhHHHHHHHHHHHHHHHHhcCCeeeecchHHHhHHHHhcC----------------------------------------
Confidence 0111 11111111111111222 23456666789988764
Q ss_pred cCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCccccccCCcCHHHHHHHHHHHhcchHH
Q 005037 413 NTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDAFLGVSPTTLLQLLVQHKRWSEGNFQ 478 (717)
Q Consensus 413 ~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~lq 478 (717)
|......||.+++.++..+||++.|++.. ..+...|.+..++++|+.||+.|.+|
T Consensus 196 ---------~~~~~~~eD~~l~~~~~~~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~r~~~g~~~ 250 (251)
T cd06439 196 ---------LPADTINDDFVLPLRIARQGYRVVYEPDA--VAYEEVAEDGSEEFRRRVRIAAGNLQ 250 (251)
T ss_pred ---------CCcccchhHHHHHHHHHHcCCeEEecccc--EEEEeCcccHHHHHHHHHHHHhcccc
Confidence 22234579999999999999999999753 34789999999999999999999987
No 34
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.88 E-value=2.1e-21 Score=198.87 Aligned_cols=226 Identities=18% Similarity=0.162 Sum_probs=160.9
Q ss_pred ceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCchhh
Q 005037 100 GVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPAAY 179 (717)
Q Consensus 100 ~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~y 179 (717)
.++|+||+|| |+ +.+.+++.|+++++||..+++|+|+|||++|.|.+.+.+..+
T Consensus 1 ~~sIiip~~n---~~-~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~~~~---------------------- 54 (249)
T cd02525 1 FVSIIIPVRN---EE-KYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEYAA---------------------- 54 (249)
T ss_pred CEEEEEEcCC---ch-hhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHHHHh----------------------
Confidence 3899999999 65 578999999999999977899999999999987543322100
Q ss_pred hhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccCC
Q 005037 180 FINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKRP 259 (717)
Q Consensus 180 f~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekrp 259 (717)
..|.+.++..+
T Consensus 55 ------------------------------------------------------------------~~~~v~~i~~~--- 65 (249)
T cd02525 55 ------------------------------------------------------------------KDPRIRLIDNP--- 65 (249)
T ss_pred ------------------------------------------------------------------cCCeEEEEeCC---
Confidence 01235555432
Q ss_pred CCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhhhhhH
Q 005037 260 WHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELYSNSS 339 (717)
Q Consensus 260 ~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~ 339 (717)
.+++++|+|.|++. +++|+++++|+|.++. |++|.+++..+.++ ++..|+++....+.+ .+....
T Consensus 66 ---~~~~~~a~N~g~~~----a~~d~v~~lD~D~~~~-~~~l~~~~~~~~~~----~~~~v~~~~~~~~~~---~~~~~~ 130 (249)
T cd02525 66 ---KRIQSAGLNIGIRN----SRGDIIIRVDAHAVYP-KDYILELVEALKRT----GADNVGGPMETIGES---KFQKAI 130 (249)
T ss_pred ---CCCchHHHHHHHHH----hCCCEEEEECCCccCC-HHHHHHHHHHHhcC----CCCEEecceecCCCC---hHHHHH
Confidence 35689999999998 6899999999999996 99999999888775 355565543322211 111111
Q ss_pred HHHHH-HHHhh---hhccC---CcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccccc
Q 005037 340 RIFNE-VELQG---LDGYG---CPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYER 412 (717)
Q Consensus 340 ~~f~~-~~~~g---~d~~~---~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~ 412 (717)
...+. ....+ ..... .....|.+.++||+++.+ +|++++.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~g~~~~~------------------- 177 (249)
T cd02525 131 AVAQSSPLGSGGSAYRGGAVKIGYVDTVHHGAYRREVFEK--------------VGGFDES------------------- 177 (249)
T ss_pred HHHhhchhccCCccccccccccccccccccceEEHHHHHH--------------hCCCCcc-------------------
Confidence 11111 00001 01111 224578888999999988 6655431
Q ss_pred cCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCccccccCCcCHHHHHHHHHHHhcchHHHHHh
Q 005037 413 NTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDAFLGVSPTTLLQLLVQHKRWSEGNFQIFIS 482 (717)
Q Consensus 413 ~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~lqil~~ 482 (717)
+ ...||.+++++++++|+++.|++.. ......|.+++++++|+.||+.|..|.+..
T Consensus 178 ---------~---~~~eD~~l~~r~~~~G~~~~~~~~~--~~~~~~~~s~~~~~~~~~r~~~~~~~~~~~ 233 (249)
T cd02525 178 ---------L---VRNEDAELNYRLRKAGYKIWLSPDI--RVYYYPRSTLKKLARQYFRYGKWRARTLRK 233 (249)
T ss_pred ---------c---CccchhHHHHHHHHcCcEEEEcCCe--EEEEcCCCCHHHHHHHHHHHhhhhHHHHHh
Confidence 1 2369999999999999999999854 335678899999999999999999999864
No 35
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.86 E-value=8.4e-18 Score=182.74 Aligned_cols=283 Identities=17% Similarity=0.198 Sum_probs=202.8
Q ss_pred CceEEEEecCCCCCCChHHH----HHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCC
Q 005037 99 PGVDIFVCTADPKIEPPMMV----INTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPR 174 (717)
Q Consensus 99 P~VdV~I~t~n~~~Ep~~~v----~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r 174 (717)
-+-.|++|+|| |++.-| +.|.+|+.+-. -.+.+.++|+.|..+++- ++.|... |..+|++.+
T Consensus 144 hrTAilmPiyn---Ed~~rVfAgLrA~~eSla~Tg-~~~~FD~FVLSDs~dpdi--alAEq~a----~~~l~~e~~---- 209 (736)
T COG2943 144 HRTAILMPIYN---EDVNRVFAGLRATYESLAATG-HAEHFDFFVLSDSRDPDI--ALAEQKA----WAELCRELG---- 209 (736)
T ss_pred cceeEEeeccc---cCHHHHHHHHHHHHHHHHhhC-CcccceEEEEcCCCCchh--hhhHHHH----HHHHHHHhC----
Confidence 35789999999 776554 55666666655 356899999999988864 4556544 334665432
Q ss_pred CchhhhhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEe
Q 005037 175 SPAAYFINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLA 254 (717)
Q Consensus 175 ~p~~yf~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~ 254 (717)
|+ | ++.|-.
T Consensus 210 ------------------------------------g~-------------------------------~----~ifYRr 218 (736)
T COG2943 210 ------------------------------------GE-------------------------------G----NIFYRR 218 (736)
T ss_pred ------------------------------------CC-------------------------------C----ceeeeh
Confidence 10 1 266655
Q ss_pred eccCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchh
Q 005037 255 REKRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNEL 334 (717)
Q Consensus 255 Rekrp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~ 334 (717)
|.+| -+.||||+..-.|.-+ +.+++++++|||++.. +|.+-+++..|+. +|+.|.+|+--.-.|.+ ..
T Consensus 219 Rr~n----~~RKaGNIaDfcrRwG--~~Y~~MlVLDADSvMt-gd~lvrLv~~ME~---~P~aGlIQt~P~~~gg~--TL 286 (736)
T COG2943 219 RRRN----VKRKAGNIADFCRRWG--SAYSYMLVLDADSVMT-GDCLVRLVRLMEA---NPDAGLIQTSPKASGGD--TL 286 (736)
T ss_pred Hhhh----hcccccCHHHHHHHhC--cccceEEEeecccccC-chHHHHHHHHHhh---CCCCceeecchhhcCcc--hH
Confidence 5544 5789999999888743 7889999999999998 9999999998874 34899999865544432 34
Q ss_pred hhhhHH---HHHH-HHHhhhhccCC--cccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccc
Q 005037 335 YSNSSR---IFNE-VELQGLDGYGC--PLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASC 408 (717)
Q Consensus 335 ~~~~~~---~f~~-~~~~g~d~~~~--~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c 408 (717)
|+..+. ..|+ +.-.|+..|++ .-|-|.|+++|.+++.+.+--+. ..|
T Consensus 287 ~AR~qQFatrvYGpl~~~GLawW~~~Es~yWGHNAIIRt~aF~~hcgLp~--------LpG------------------- 339 (736)
T COG2943 287 YARCQQFATRVYGPLFTAGLAWWQLGESHYWGHNAIIRTKAFIEHCGLPP--------LPG------------------- 339 (736)
T ss_pred HHHHHHHHHHHhchHHhhhhHHHhccccccccccceeechhhHHhcCCCC--------CCC-------------------
Confidence 543322 2243 45578888875 46889999999999987321100 100
Q ss_pred cccccCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCccccccCCcCHHHHHHHHHHHhcchHHHHHhhhcccc
Q 005037 409 TYERNTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDAFLGVSPTTLLQLLVQHKRWSEGNFQIFISKYCPAW 488 (717)
Q Consensus 409 ~Ye~~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~lqil~~~~~pl~ 488 (717)
++.|....++.|+.-+-.|.+.||.+...+ +...++++.|.|+.|++++-+||++|++|.+ ++
T Consensus 340 ----------~~pFgG~ilSHDfvEAALmRRaGW~v~ia~-dL~GSyEE~PpnLlD~l~RDRRWC~GNLqh~-----rl- 402 (736)
T COG2943 340 ----------RGPFGGHILSHDFVEAALMRRAGWGVWIAY-DLDGSYEELPPNLLDELKRDRRWCHGNLQHF-----RL- 402 (736)
T ss_pred ----------CCCCCccccchHHHHHHHHhhcCceEEEec-cCCCchhhCCchHHHHHhhhhHhhhcchhhc-----ee-
Confidence 124444568999999999999999877665 4568899999999999999999999999875 33
Q ss_pred cccCCCchhHHHHHhhhhhhhhHHHHHHHHHHHh
Q 005037 489 HAHGKISLGFRLGYCCYGLWAPSCLATLFYSVVP 522 (717)
Q Consensus 489 ~~~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P 522 (717)
++.++|.+..|+.++...+.++++...+.++++.
T Consensus 403 ~~~~GlHwvsR~h~~tGVmsYlsaPlWfl~ll~g 436 (736)
T COG2943 403 FLVKGLHWVSRAHFLTGVMSYLSAPLWFLFLLLG 436 (736)
T ss_pred eccCCccHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 4567899999999998877666654444444333
No 36
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.85 E-value=2e-20 Score=186.77 Aligned_cols=166 Identities=22% Similarity=0.145 Sum_probs=121.2
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCchhhhhH
Q 005037 103 IFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPAAYFIN 182 (717)
Q Consensus 103 V~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 182 (717)
|+||+|| |+ ..+.+||.|+++++ | +++|+|+||||+|.|.+.+. . + .
T Consensus 1 ViIp~~N---e~-~~l~~~l~sl~~~~-~--~~eIivvdd~S~D~t~~~~~-~-~----------~-------------- 47 (191)
T cd06436 1 VLVPCLN---EE-AVIQRTLASLLRNK-P--NFLVLVIDDASDDDTAGIVR-L-A----------I-------------- 47 (191)
T ss_pred CEEeccc---cH-HHHHHHHHHHHhCC-C--CeEEEEEECCCCcCHHHHHh-h-e----------e--------------
Confidence 6899999 55 68999999999999 6 68999999999998864322 0 0 0
Q ss_pred HHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccCCCCC
Q 005037 183 RLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKRPWHF 262 (717)
Q Consensus 183 ~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekrp~~~ 262 (717)
..|++.++.++.. + .
T Consensus 48 ---------------------------------------------------------------~~~~v~~i~~~~~-~-~ 62 (191)
T cd06436 48 ---------------------------------------------------------------TDSRVHLLRRHLP-N-A 62 (191)
T ss_pred ---------------------------------------------------------------cCCcEEEEeccCC-c-C
Confidence 0012555655321 1 2
Q ss_pred CCChHHHHHHHHHhccc-------CCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhh
Q 005037 263 QNFKAGAMNALIRVSSK-------ISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELY 335 (717)
Q Consensus 263 ~~~KAGALN~al~~s~~-------~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~ 335 (717)
+.+|++|+|.+++.+.. ..++|+|+++|+|+.++ |++|+++..+|.|| +++.||++.++.|.+.+. +
T Consensus 63 ~~Gk~~aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~~~-~~~l~~~~~~~~~~----~v~~v~~~~~~~~~~~~~-~ 136 (191)
T cd06436 63 RTGKGDALNAAYDQIRQILIEEGADPERVIIAVIDADGRLD-PNALEAVAPYFSDP----RVAGTQSRVRMYNRHKNL-L 136 (191)
T ss_pred CCCHHHHHHHHHHHHhhhccccccCCCccEEEEECCCCCcC-HhHHHHHHHhhcCC----ceEEEeeeEEEecCCCCH-H
Confidence 46899999999997421 01358999999999997 99999988888876 699999999888865442 2
Q ss_pred hh----hHHHHHHHHHhhhhccCCcccccccceEehhhhcc
Q 005037 336 SN----SSRIFNEVELQGLDGYGCPLYTGSGCFHRREILCG 372 (717)
Q Consensus 336 ~~----~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~ 372 (717)
.. +....+..++.++...+...++|+|+++||++|++
T Consensus 137 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~G~~~~~r~~~l~~ 177 (191)
T cd06436 137 TILQDLEFFIIIAATQSLRALTGTVGLGGNGQFMRLSALDG 177 (191)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcEEECCeeEEEeHHHHHH
Confidence 21 22223345566666666555789999999999998
No 37
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.84 E-value=2.9e-20 Score=183.79 Aligned_cols=163 Identities=20% Similarity=0.206 Sum_probs=115.4
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCchhhhhH
Q 005037 103 IFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPAAYFIN 182 (717)
Q Consensus 103 V~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 182 (717)
|+||+|| |+ +.+.+||.++++++||.++++|+|+||||+|.|.+.+.+ ++.
T Consensus 1 VvIp~~n---e~-~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~~~~~--------------~~~----------- 51 (183)
T cd06438 1 ILIPAHN---EE-AVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQVARA--------------AGA----------- 51 (183)
T ss_pred CEEeccc---hH-HHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHHHHHH--------------cCC-----------
Confidence 6899999 55 689999999999999988899999999999988642211 000
Q ss_pred HHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccCCCCC
Q 005037 183 RLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKRPWHF 262 (717)
Q Consensus 183 ~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekrp~~~ 262 (717)
.+ +.+.+. +
T Consensus 52 ------------------------------------------------------------------~~--~~~~~~---~ 60 (183)
T cd06438 52 ------------------------------------------------------------------TV--LERHDP---E 60 (183)
T ss_pred ------------------------------------------------------------------eE--EEeCCC---C
Confidence 01 112111 2
Q ss_pred CCChHHHHHHHHHhcc-cCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhhhhh---
Q 005037 263 QNFKAGAMNALIRVSS-KISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELYSNS--- 338 (717)
Q Consensus 263 ~~~KAGALN~al~~s~-~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~--- 338 (717)
+++|++|+|.+++.+. ..+++|+++++|+|+.++ |+++++++..|.+. ...||+.....+.+.+. +...
T Consensus 61 ~~gk~~aln~g~~~a~~~~~~~d~v~~~DaD~~~~-p~~l~~l~~~~~~~-----~~~v~g~~~~~~~~~~~-~~~~~~~ 133 (183)
T cd06438 61 RRGKGYALDFGFRHLLNLADDPDAVVVFDADNLVD-PNALEELNARFAAG-----ARVVQAYYNSKNPDDSW-ITRLYAF 133 (183)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCCC-hhHHHHHHHHHhhC-----CCeeEEEEeeeCCccCH-HHHHHHH
Confidence 4689999999998741 124699999999999997 99999999998753 34678766655543332 1111
Q ss_pred -HHHHHHHHHhhhhccCCc-ccccccceEehhhhcc
Q 005037 339 -SRIFNEVELQGLDGYGCP-LYTGSGCFHRREILCG 372 (717)
Q Consensus 339 -~~~f~~~~~~g~d~~~~~-~~~Gtg~~~RR~aL~~ 372 (717)
...++.....++..+++. .+.|+|+++||+++++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~ 169 (183)
T cd06438 134 AFLVFNRLRPLGRSNLGLSCQLGGTGMCFPWAVLRQ 169 (183)
T ss_pred HHHHHHHHHHHHHHHcCCCeeecCchhhhHHHHHHh
Confidence 122233344466666654 4689999999999986
No 38
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.79 E-value=3.1e-18 Score=170.53 Aligned_cols=194 Identities=15% Similarity=0.122 Sum_probs=133.2
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCchh
Q 005037 99 PGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPAA 178 (717)
Q Consensus 99 P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~ 178 (717)
|.|+|+||+|| |+++.+++|+.|+++++|| ..+|+|+|||++|.|.+.+.+.. ..
T Consensus 1 p~vsiii~~~n---~~~~~l~~~l~sl~~q~~~--~~eiivvd~gs~d~~~~~~~~~~---------~~----------- 55 (202)
T cd04184 1 PLISIVMPVYN---TPEKYLREAIESVRAQTYP--NWELCIADDASTDPEVKRVLKKY---------AA----------- 55 (202)
T ss_pred CeEEEEEeccc---CcHHHHHHHHHHHHhCcCC--CeEEEEEeCCCCChHHHHHHHHH---------Hh-----------
Confidence 68999999999 5546899999999999998 57999999999987643222210 00
Q ss_pred hhhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccC
Q 005037 179 YFINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKR 258 (717)
Q Consensus 179 yf~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekr 258 (717)
+ .+++.++..+.
T Consensus 56 --------------------------------------------~-----------------------~~~~~~~~~~~- 67 (202)
T cd04184 56 --------------------------------------------Q-----------------------DPRIKVVFREE- 67 (202)
T ss_pred --------------------------------------------c-----------------------CCCEEEEEccc-
Confidence 0 01244444332
Q ss_pred CCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHh-hccCCCCeEEEEeccceeccCCcchhhhh
Q 005037 259 PWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFF-IDEEKGHEVAFVQFPQNFDNVTKNELYSN 337 (717)
Q Consensus 259 p~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f-~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~ 337 (717)
..+++.|+|.+++. +++|+++++|+|.++. |++|.+++..+ .++ ++++|.+.......+.. ....
T Consensus 68 ----~~g~~~a~n~g~~~----a~~d~i~~ld~D~~~~-~~~l~~~~~~~~~~~----~~~~v~~~~~~~~~~~~-~~~~ 133 (202)
T cd04184 68 ----NGGISAATNSALEL----ATGEFVALLDHDDELA-PHALYEVVKALNEHP----DADLIYSDEDKIDEGGK-RSEP 133 (202)
T ss_pred ----CCCHHHHHHHHHHh----hcCCEEEEECCCCcCC-hHHHHHHHHHHHhCC----CCCEEEccHHhccCCCC-Eecc
Confidence 46899999999998 6899999999999997 99999999988 555 57777665433221110 0000
Q ss_pred hHHHHHHHHHhhhhccCCcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccccccCCcC
Q 005037 338 SSRIFNEVELQGLDGYGCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYERNTQWG 417 (717)
Q Consensus 338 ~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~t~wG 417 (717)
.....+. .+......+.|.++++||+++.+ +|||++.
T Consensus 134 ~~~~~~~-----~~~~~~~~~~~~~~~~~r~~~~~--------------iggf~~~------------------------ 170 (202)
T cd04184 134 FFKPDWS-----PDLLLSQNYIGHLLVYRRSLVRQ--------------VGGFREG------------------------ 170 (202)
T ss_pred ccCCCCC-----HHHhhhcCCccceEeEEHHHHHH--------------hCCCCcC------------------------
Confidence 0000000 00001113456777899999998 8776531
Q ss_pred cccccCCCCCcchHHHHHHHHhcCCeEEEeCC
Q 005037 418 KEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKP 449 (717)
Q Consensus 418 ~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~ 449 (717)
+ ...||+++++|++.+||+.+|+++
T Consensus 171 ----~---~~~eD~~l~~rl~~~g~~~~~~~~ 195 (202)
T cd04184 171 ----F---EGAQDYDLVLRVSEHTDRIAHIPR 195 (202)
T ss_pred ----c---ccchhHHHHHHHHhccceEEEccH
Confidence 1 246999999999999999999985
No 39
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=99.77 E-value=9.5e-18 Score=166.90 Aligned_cols=137 Identities=23% Similarity=0.345 Sum_probs=109.2
Q ss_pred EEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhhhhhHHHHHHH----HHhhhhccCC-cccc
Q 005037 285 VILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELYSNSSRIFNEV----ELQGLDGYGC-PLYT 359 (717)
Q Consensus 285 ~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~----~~~g~d~~~~-~~~~ 359 (717)
+|+++|||+.++ ||++++++.++.|| ++++||+|..+.|. ++...+.+...+.. .....+..+. ..+.
T Consensus 1 ~v~~~DaDt~~~-~d~l~~~~~~~~~~----~~~~vq~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (193)
T PF13632_consen 1 YVLFLDADTRLP-PDFLERLVAALEDP----KVDAVQGPIIFRNR--GSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLS 73 (193)
T ss_pred CEEEEcCCCCCC-hHHHHHHHHHHhCC----CceEEEccEEecCC--CChhheeehhhhhhhhhhhHHHHHhcCCCcccc
Confidence 589999999997 99999999999876 69999999998643 23344444444421 1223334444 3468
Q ss_pred cccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccccccCCcCcccccC-CCCCcchHHHHHHHH
Q 005037 360 GSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYERNTQWGKEMGLK-YGCPAEDVVTGLSIQ 438 (717)
Q Consensus 360 Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~t~wG~~~G~~-~~svtED~~t~~rl~ 438 (717)
|+|.++||+++++ +| ||+ ..+++||.++++++.
T Consensus 74 G~~~~~r~~~l~~--------------vg--------------------------------~~~~~~~~~ED~~l~~~l~ 107 (193)
T PF13632_consen 74 GSGMLFRREALRE--------------VG--------------------------------GFDDPFSIGEDMDLGFRLR 107 (193)
T ss_pred CcceeeeHHHHHH--------------hC--------------------------------cccccccccchHHHHHHHH
Confidence 9999999999998 64 566 678999999999999
Q ss_pred hcCCeEEEeCCCCccccccCCcCHHHHHHHHHHHhcch
Q 005037 439 SRGWKSVYSKPERDAFLGVSPTTLLQLLVQHKRWSEGN 476 (717)
Q Consensus 439 ~~Gwrsvy~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~ 476 (717)
++||++.|++.. .+++++|+|+.++++||+||..|.
T Consensus 108 ~~G~~~~~~~~~--~~~~~~p~t~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 108 RAGYRIVYVPDA--IVYTEAPPTFRAFIRQRRRWARGA 143 (193)
T ss_pred HCCCEEEEeccc--ceeeeCCCCHHHHHHHHHHHHhhh
Confidence 999999999853 357999999999999999999997
No 40
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.76 E-value=1.4e-17 Score=165.91 Aligned_cols=190 Identities=15% Similarity=0.074 Sum_probs=131.2
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCCh-hhHHHHHHhhcccccchhhhhhcCCCCCCchhhh
Q 005037 102 DIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSD-LTFYALMEASHFSTHWIPYCKKFNVEPRSPAAYF 180 (717)
Q Consensus 102 dV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd-~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf 180 (717)
+|+|||||++ .++.+++|+.|+++++||. .+|+|+|||+++ .|.+.+.+. .++
T Consensus 1 sviip~~n~~--~~~~l~~~l~Sl~~q~~~~--~eiiivdd~ss~d~t~~~~~~~----------~~~------------ 54 (201)
T cd04195 1 SVLMSVYIKE--KPEFLREALESILKQTLPP--DEVVLVKDGPVTQSLNEVLEEF----------KRK------------ 54 (201)
T ss_pred CEEEEccccc--hHHHHHHHHHHHHhcCCCC--cEEEEEECCCCchhHHHHHHHH----------Hhc------------
Confidence 5899999943 3578999999999999994 589999999954 443222110 000
Q ss_pred hHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccCCC
Q 005037 181 INRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKRPW 260 (717)
Q Consensus 181 ~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekrp~ 260 (717)
.| +.++..++
T Consensus 55 ------------------------------------------------------------------~~-i~~i~~~~--- 64 (201)
T cd04195 55 ------------------------------------------------------------------LP-LKVVPLEK--- 64 (201)
T ss_pred ------------------------------------------------------------------CC-eEEEEcCc---
Confidence 11 45565544
Q ss_pred CCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhhhh---
Q 005037 261 HFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELYSN--- 337 (717)
Q Consensus 261 ~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~--- 337 (717)
..|+++|+|.|++. ++||+|+++|+|.++. |+++.+++..|.+. +++++|.+.....+.+.......
T Consensus 65 --n~G~~~a~N~g~~~----a~gd~i~~lD~Dd~~~-~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (201)
T cd04195 65 --NRGLGKALNEGLKH----CTYDWVARMDTDDISL-PDRFEKQLDFIEKN---PEIDIVGGGVLEFDSDGNDIGKRRLP 134 (201)
T ss_pred --cccHHHHHHHHHHh----cCCCEEEEeCCccccC-cHHHHHHHHHHHhC---CCeEEEcccEEEECCCCCeeccccCC
Confidence 36899999999998 6899999999999997 99999999998642 26888887665443322111000
Q ss_pred -hHHHHHHHHHhhhhccCCcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccccccCCc
Q 005037 338 -SSRIFNEVELQGLDGYGCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYERNTQW 416 (717)
Q Consensus 338 -~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~t~w 416 (717)
......+.. .....++|.++++||+++.+ +|++
T Consensus 135 ~~~~~~~~~~------~~~~~~~~~~~~~rr~~~~~--------------~g~~-------------------------- 168 (201)
T cd04195 135 TSHDDILKFA------RRRSPFNHPTVMFRKSKVLA--------------VGGY-------------------------- 168 (201)
T ss_pred CCHHHHHHHh------ccCCCCCChHHhhhHHHHHH--------------cCCc--------------------------
Confidence 001111111 11222456678999999987 6544
Q ss_pred CcccccCCCCCcchHHHHHHHHhcCCeEEEeCC
Q 005037 417 GKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKP 449 (717)
Q Consensus 417 G~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~ 449 (717)
......||.++.+++..+|+++.|++.
T Consensus 169 ------~~~~~~eD~~~~~r~~~~g~~~~~~~~ 195 (201)
T cd04195 169 ------QDLPLVEDYALWARMLANGARFANLPE 195 (201)
T ss_pred ------CCCCCchHHHHHHHHHHcCCceecccH
Confidence 333568999999999999999999874
No 41
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.75 E-value=3.6e-17 Score=174.61 Aligned_cols=202 Identities=18% Similarity=0.125 Sum_probs=134.7
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCchhhhh
Q 005037 102 DIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPAAYFI 181 (717)
Q Consensus 102 dV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 181 (717)
+|+||+|| |+++.+.+||.|+++++||....+|+|+||||+|.|.+.+.+.. ++
T Consensus 1 SIIIp~~N---~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~---------~~-------------- 54 (299)
T cd02510 1 SVIIIFHN---EALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEY---------YK-------------- 54 (299)
T ss_pred CEEEEEec---CcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHH---------Hh--------------
Confidence 58999999 76679999999999999986667999999999998865433200 00
Q ss_pred HHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccCCCC
Q 005037 182 NRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKRPWH 261 (717)
Q Consensus 182 ~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekrp~~ 261 (717)
...|++.++..++
T Consensus 55 ---------------------------------------------------------------~~~~~v~vi~~~~---- 67 (299)
T cd02510 55 ---------------------------------------------------------------KYLPKVKVLRLKK---- 67 (299)
T ss_pred ---------------------------------------------------------------hcCCcEEEEEcCC----
Confidence 0013366665543
Q ss_pred CCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEecccee---------ccCCc-
Q 005037 262 FQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNF---------DNVTK- 331 (717)
Q Consensus 262 ~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f---------~n~~~- 331 (717)
..|++.|.|.|++. ++||+|+++|+|+++. |++|.+++..+.++. . +.| +|... .+...
T Consensus 68 -n~G~~~a~N~g~~~----A~gd~i~fLD~D~~~~-~~wL~~ll~~l~~~~---~-~~v-~p~~~~~~~~~~~~~~~~~~ 136 (299)
T cd02510 68 -REGLIRARIAGARA----ATGDVLVFLDSHCEVN-VGWLEPLLARIAENR---K-TVV-CPIIDVIDADTFEYRGSSGD 136 (299)
T ss_pred -CCCHHHHHHHHHHH----ccCCEEEEEeCCcccC-ccHHHHHHHHHHhCC---C-eEE-EeeeccccCCCeeEecCCCc
Confidence 36899999999998 6899999999999996 999999999887542 2 223 23211 11000
Q ss_pred -chhhhhhHHH-HH----HHHHhhh--hccCCcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhh
Q 005037 332 -NELYSNSSRI-FN----EVELQGL--DGYGCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSK 403 (717)
Q Consensus 332 -~d~~~~~~~~-f~----~~~~~g~--d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~ 403 (717)
...+.-.... +. ....... .....+...|.++++||+++.+ +|||++...
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~--------------vGgfDe~~~-------- 194 (299)
T cd02510 137 ARGGFDWSLHFKWLPLPEEERRRESPTAPIRSPTMAGGLFAIDREWFLE--------------LGGYDEGMD-------- 194 (299)
T ss_pred eeEEecccceeccccCCHHHhhhcCCCCCccCccccceeeEEEHHHHHH--------------hCCCCCccc--------
Confidence 0000000000 00 0000000 1122345678888999999998 888875310
Q ss_pred hcccccccccCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCC
Q 005037 404 ALASCTYERNTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPE 450 (717)
Q Consensus 404 ~v~~c~Ye~~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~ 450 (717)
.++ .||+++++|+..+||+.+|++..
T Consensus 195 -------------------~~~--~ED~Dl~~R~~~~G~~i~~~p~a 220 (299)
T cd02510 195 -------------------IWG--GENLELSFKVWQCGGSIEIVPCS 220 (299)
T ss_pred -------------------ccC--chhHHHHHHHHHcCCeEEEeecc
Confidence 111 59999999999999999999864
No 42
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.72 E-value=1.2e-16 Score=157.40 Aligned_cols=187 Identities=18% Similarity=0.079 Sum_probs=130.2
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCchhhhh
Q 005037 102 DIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPAAYFI 181 (717)
Q Consensus 102 dV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 181 (717)
+|+||||| |+ +.+++++.|+++++||. ++|+|+|||++|.|.+.+.+...
T Consensus 1 sivi~~~n---~~-~~l~~~l~sl~~q~~~~--~evivvDd~s~d~~~~~~~~~~~------------------------ 50 (202)
T cd06433 1 SIITPTYN---QA-ETLEETIDSVLSQTYPN--IEYIVIDGGSTDGTVDIIKKYED------------------------ 50 (202)
T ss_pred CEEEeccc---hH-HHHHHHHHHHHhCCCCC--ceEEEEeCCCCccHHHHHHHhHh------------------------
Confidence 58999999 55 68999999999999984 89999999999987643322100
Q ss_pred HHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccCCCC
Q 005037 182 NRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKRPWH 261 (717)
Q Consensus 182 ~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekrp~~ 261 (717)
...++..++
T Consensus 51 -------------------------------------------------------------------~~~~~~~~~---- 59 (202)
T cd06433 51 -------------------------------------------------------------------KITYWISEP---- 59 (202)
T ss_pred -------------------------------------------------------------------hcEEEEecC----
Confidence 012222332
Q ss_pred CCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHh-hccCCCCeEEEEeccceeccCCcchhhhhhHH
Q 005037 262 FQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFF-IDEEKGHEVAFVQFPQNFDNVTKNELYSNSSR 340 (717)
Q Consensus 262 ~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f-~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~ 340 (717)
..++++|+|.|++. +++|+++++|+|..+. |+.+.+++..+ .++ +.++|.+...+.+.+........
T Consensus 60 -~~g~~~a~n~~~~~----a~~~~v~~ld~D~~~~-~~~~~~~~~~~~~~~----~~~~v~g~~~~~~~~~~~~~~~~-- 127 (202)
T cd06433 60 -DKGIYDAMNKGIAL----ATGDIIGFLNSDDTLL-PGALLAVVAAFAEHP----EVDVVYGDVLLVDENGRVIGRRR-- 127 (202)
T ss_pred -CcCHHHHHHHHHHH----cCCCEEEEeCCCcccC-chHHHHHHHHHHhCC----CccEEEeeeEEEcCCCCcccCCC--
Confidence 36899999999998 6899999999999997 99999998544 444 56777766554433222110000
Q ss_pred HHHHHHHhhhhccCCcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccccccCCcCccc
Q 005037 341 IFNEVELQGLDGYGCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYERNTQWGKEM 420 (717)
Q Consensus 341 ~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~t~wG~~~ 420 (717)
.. .............+|+++++||+++++ +|+|++.
T Consensus 128 -~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~f~~~--------------------------- 163 (202)
T cd06433 128 -PP--PFLDKFLLYGMPICHQATFFRRSLFEK--------------YGGFDES--------------------------- 163 (202)
T ss_pred -Cc--chhhhHHhhcCcccCcceEEEHHHHHH--------------hCCCchh---------------------------
Confidence 00 001111122345678888999999998 6655421
Q ss_pred ccCCCCCcchHHHHHHHHhcCCeEEEeCC
Q 005037 421 GLKYGCPAEDVVTGLSIQSRGWKSVYSKP 449 (717)
Q Consensus 421 G~~~~svtED~~t~~rl~~~Gwrsvy~~~ 449 (717)
+ ...||.++.+++..+|++.++++.
T Consensus 164 -~---~~~~D~~~~~r~~~~g~~~~~~~~ 188 (202)
T cd06433 164 -Y---RIAADYDLLLRLLLAGKIFKYLPE 188 (202)
T ss_pred -h---CchhhHHHHHHHHHcCCceEecch
Confidence 1 357999999999999999998875
No 43
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.71 E-value=6.1e-16 Score=160.15 Aligned_cols=205 Identities=13% Similarity=0.015 Sum_probs=130.6
Q ss_pred CCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCC
Q 005037 96 DKLPGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRS 175 (717)
Q Consensus 96 ~~~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~ 175 (717)
...|.|+|+||+|||+ ..+..++.++.+...+...++|+|+||||+|.|.+.+.+.+ ++++
T Consensus 6 ~~~~~vsVvIp~yne~----~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~~i~~~~~----------~~~~----- 66 (243)
T PLN02726 6 EGAMKYSIIVPTYNER----LNIALIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQLQ----------KVYG----- 66 (243)
T ss_pred CCCceEEEEEccCCch----hhHHHHHHHHHHHhccCCCeEEEEEeCCCCCCHHHHHHHHH----------HhcC-----
Confidence 4478999999999944 46677777776533222378999999999999976544321 1100
Q ss_pred chhhhhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEee
Q 005037 176 PAAYFINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAR 255 (717)
Q Consensus 176 p~~yf~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~R 255 (717)
-+++.++.+
T Consensus 67 -----------------------------------------------------------------------~~~v~~~~~ 75 (243)
T PLN02726 67 -----------------------------------------------------------------------EDRILLRPR 75 (243)
T ss_pred -----------------------------------------------------------------------CCcEEEEec
Confidence 012444444
Q ss_pred ccCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCC-cchh
Q 005037 256 EKRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVT-KNEL 334 (717)
Q Consensus 256 ekrp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~-~~d~ 334 (717)
++ ..+|++|+|.|++. ++||+++++|+|..++ |++|.+++..+.++ +..+|.+.....+.. ....
T Consensus 76 ~~-----n~G~~~a~n~g~~~----a~g~~i~~lD~D~~~~-~~~l~~l~~~~~~~----~~~~v~g~r~~~~~~~~~~~ 141 (243)
T PLN02726 76 PG-----KLGLGTAYIHGLKH----ASGDFVVIMDADLSHH-PKYLPSFIKKQRET----GADIVTGTRYVKGGGVHGWD 141 (243)
T ss_pred CC-----CCCHHHHHHHHHHH----cCCCEEEEEcCCCCCC-HHHHHHHHHHHHhc----CCcEEEEccccCCCCcCCcc
Confidence 33 36799999999998 6899999999999996 99999999988764 356666543222111 0100
Q ss_pred hh-hhHHHHHHHHHhhhhccCCcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhccccccccc
Q 005037 335 YS-NSSRIFNEVELQGLDGYGCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYERN 413 (717)
Q Consensus 335 ~~-~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~ 413 (717)
+. ......+.....-..+.+..-.+|...++||++++. ++.+.
T Consensus 142 ~~r~~~~~~~~~~~~~~~~~~~~d~~g~~~~~rr~~~~~--------------i~~~~---------------------- 185 (243)
T PLN02726 142 LRRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKRSALED--------------LVSSV---------------------- 185 (243)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCcCCCcccceeHHHHHH--------------HHhhc----------------------
Confidence 10 111111222222122223334566777899999987 43111
Q ss_pred CCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCC
Q 005037 414 TQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKP 449 (717)
Q Consensus 414 t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~ 449 (717)
..+...+|+++.+++..+||+++++|.
T Consensus 186 ---------~~~~~~~~~el~~~~~~~g~~i~~vp~ 212 (243)
T PLN02726 186 ---------VSKGYVFQMEIIVRASRKGYRIEEVPI 212 (243)
T ss_pred ---------cCCCcEEehHHHHHHHHcCCcEEEeCc
Confidence 011235789999999999999999974
No 44
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.70 E-value=1.1e-15 Score=155.22 Aligned_cols=203 Identities=16% Similarity=0.060 Sum_probs=127.6
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCchhhhhH
Q 005037 103 IFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPAAYFIN 182 (717)
Q Consensus 103 V~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 182 (717)
|+||+|| |+ ..+.+||.|+++++|| +.++|+|+||||+|.|.+.+.+- ++++.
T Consensus 1 ViIp~yn---~~-~~l~~~l~sl~~q~~~-~~~eiiVvDd~S~d~t~~i~~~~----------~~~~~------------ 53 (219)
T cd06913 1 IILPVHN---GE-QWLDECLESVLQQDFE-GTLELSVFNDASTDKSAEIIEKW----------RKKLE------------ 53 (219)
T ss_pred CEEeecC---cH-HHHHHHHHHHHhCCCC-CCEEEEEEeCCCCccHHHHHHHH----------HHhCc------------
Confidence 6899999 44 6999999999999998 46899999999999987544331 11100
Q ss_pred HHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccCCCCC
Q 005037 183 RLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKRPWHF 262 (717)
Q Consensus 183 ~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekrp~~~ 262 (717)
.+++.++..+.+.+ .
T Consensus 54 ----------------------------------------------------------------~~~~~~~~~~~~~~-~ 68 (219)
T cd06913 54 ----------------------------------------------------------------DSGVIVLVGSHNSP-S 68 (219)
T ss_pred ----------------------------------------------------------------ccCeEEEEecccCC-C
Confidence 01244444332211 2
Q ss_pred CCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhhhhhHHHH
Q 005037 263 QNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELYSNSSRIF 342 (717)
Q Consensus 263 ~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f 342 (717)
..+.+.|+|.|++. ++||+++++|+|..+. |+.+.+.+..+.+.. .++|..+......+....+.......
T Consensus 69 ~~G~~~a~N~g~~~----a~gd~i~~lD~D~~~~-~~~l~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~~~~~ 139 (219)
T cd06913 69 PKGVGYAKNQAIAQ----SSGRYLCFLDSDDVMM-PQRIRLQYEAALQHP----NSIIGCQVRRIPEDSTERYTRWINTL 139 (219)
T ss_pred CccHHHHHHHHHHh----cCCCEEEEECCCccCC-hhHHHHHHHHHHhCC----CcEEEEEEEecCcccchhhHHHHHhc
Confidence 46899999999998 6899999999999997 999998887776431 22332221111111111111100000
Q ss_pred -HHHHHhhhhccCCcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccccccCCcCcccc
Q 005037 343 -NEVELQGLDGYGCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYERNTQWGKEMG 421 (717)
Q Consensus 343 -~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~t~wG~~~G 421 (717)
............++.....++++||+++.+ +|||++..
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~--------------~g~f~~~~--------------------------- 178 (219)
T cd06913 140 TREQLLTQVYTSHGPTVIMPTWFCSREWFSH--------------VGPFDEGG--------------------------- 178 (219)
T ss_pred CHHHHHHHHHhhcCCccccccceeehhHHhh--------------cCCccchh---------------------------
Confidence 000111111122333334456899999998 87765321
Q ss_pred cCCCCCcchHHHHHHHHhcCCeEEEeCCC
Q 005037 422 LKYGCPAEDVVTGLSIQSRGWKSVYSKPE 450 (717)
Q Consensus 422 ~~~~svtED~~t~~rl~~~Gwrsvy~~~~ 450 (717)
....||+++.+|+..+|++..|+++.
T Consensus 179 ---~~~~eD~~l~~r~~~~g~~i~~~~~~ 204 (219)
T cd06913 179 ---KGVPEDLLFFYEHLRKGGGVYRVDRC 204 (219)
T ss_pred ---ccchhHHHHHHHHHHcCCceEEEcce
Confidence 12359999999999999999999863
No 45
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.69 E-value=4.2e-16 Score=155.95 Aligned_cols=194 Identities=16% Similarity=0.107 Sum_probs=130.7
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCchhhhh
Q 005037 102 DIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPAAYFI 181 (717)
Q Consensus 102 dV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 181 (717)
+|+||||| |+ ..+.++|.|+++++|| +++|+|+|||++|.|.+.+.+.+ ++
T Consensus 1 sIvIp~yn---~~-~~l~~~l~sl~~q~~~--~~eiiVvddgS~d~t~~~~~~~~----------~~------------- 51 (214)
T cd04196 1 AVLMATYN---GE-KYLREQLDSILAQTYK--NDELIISDDGSTDGTVEIIKEYI----------DK------------- 51 (214)
T ss_pred CEEEEecC---cH-HHHHHHHHHHHhCcCC--CeEEEEEeCCCCCCcHHHHHHHH----------hc-------------
Confidence 58999999 55 6899999999999999 68999999999998876444321 00
Q ss_pred HHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccCCCC
Q 005037 182 NRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKRPWH 261 (717)
Q Consensus 182 ~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekrp~~ 261 (717)
|| +.+.++..++
T Consensus 52 ------------------------------------------~~----------------------~~~~~~~~~~---- 63 (214)
T cd04196 52 ------------------------------------------DP----------------------FIIILIRNGK---- 63 (214)
T ss_pred ------------------------------------------CC----------------------ceEEEEeCCC----
Confidence 11 0133343333
Q ss_pred CCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhhhhhHHH
Q 005037 262 FQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELYSNSSRI 341 (717)
Q Consensus 262 ~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~ 341 (717)
.+|+++|+|.+++. ++||+|+++|+|.++. |+.|.+++..+... ++.+++.+.....+.+... .......
T Consensus 64 -~~G~~~~~n~g~~~----~~g~~v~~ld~Dd~~~-~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~ 133 (214)
T cd04196 64 -NLGVARNFESLLQA----ADGDYVFFCDQDDIWL-PDKLERLLKAFLKD---DKPLLVYSDLELVDENGNP-IGESFFE 133 (214)
T ss_pred -CccHHHHHHHHHHh----CCCCEEEEECCCcccC-hhHHHHHHHHHhcC---CCceEEecCcEEECCCCCC-ccccccc
Confidence 47899999999987 6899999999999997 99999999985432 2577777765544322110 0000000
Q ss_pred HHHH--HHhhhhccCCcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccccccCCcCcc
Q 005037 342 FNEV--ELQGLDGYGCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYERNTQWGKE 419 (717)
Q Consensus 342 f~~~--~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~t~wG~~ 419 (717)
.... ............+.|+++++||+++.+ +|++++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--------------~~~~~~--------------------------- 172 (214)
T cd04196 134 YQKIKPGTSFNNLLFQNVVTGCTMAFNRELLEL--------------ALPFPD--------------------------- 172 (214)
T ss_pred ccccCCccCHHHHHHhCccCCceeeEEHHHHHh--------------hccccc---------------------------
Confidence 0000 000111112334678899999999988 554332
Q ss_pred cccCCC-CCcchHHHHHHHHhcCCeEEEeCC
Q 005037 420 MGLKYG-CPAEDVVTGLSIQSRGWKSVYSKP 449 (717)
Q Consensus 420 ~G~~~~-svtED~~t~~rl~~~Gwrsvy~~~ 449 (717)
. ...||..+.+++.. |++..|+++
T Consensus 173 -----~~~~~~D~~~~~~~~~-~~~~~~~~~ 197 (214)
T cd04196 173 -----ADVIMHDWWLALLASA-FGKVVFLDE 197 (214)
T ss_pred -----cccccchHHHHHHHHH-cCceEEcch
Confidence 2 35799999988877 678888875
No 46
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.67 E-value=2.1e-15 Score=152.24 Aligned_cols=178 Identities=18% Similarity=0.113 Sum_probs=121.3
Q ss_pred eEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCchhhh
Q 005037 101 VDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPAAYF 180 (717)
Q Consensus 101 VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf 180 (717)
|+|+||+|| |+ ..+.++|.|+++++|+ ..+|+|+||+++|.|.+.+.+
T Consensus 1 vsvii~~~n---~~-~~l~~~l~sl~~q~~~--~~evivvdd~s~d~~~~~~~~-------------------------- 48 (221)
T cd02522 1 LSIIIPTLN---EA-ENLPRLLASLRRLNPL--PLEIIVVDGGSTDGTVAIARS-------------------------- 48 (221)
T ss_pred CEEEEEccC---cH-HHHHHHHHHHHhccCC--CcEEEEEeCCCCccHHHHHhc--------------------------
Confidence 689999999 65 4789999999999995 679999999999977532211
Q ss_pred hHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccCCC
Q 005037 181 INRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKRPW 260 (717)
Q Consensus 181 ~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekrp~ 260 (717)
+++.++..
T Consensus 49 -------------------------------------------------------------------~~~~~~~~----- 56 (221)
T cd02522 49 -------------------------------------------------------------------AGVVVISS----- 56 (221)
T ss_pred -------------------------------------------------------------------CCeEEEeC-----
Confidence 01333321
Q ss_pred CCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhhhhhHH
Q 005037 261 HFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELYSNSSR 340 (717)
Q Consensus 261 ~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~ 340 (717)
..+|++|+|.|++. +++|+++++|+|.++. |+++.+++..+.++ ....+.....+.+.... ..
T Consensus 57 --~~g~~~a~n~g~~~----a~~~~i~~~D~D~~~~-~~~l~~l~~~~~~~----~~~~~~~~~~~~~~~~~---~~--- 119 (221)
T cd02522 57 --PKGRARQMNAGAAA----ARGDWLLFLHADTRLP-PDWDAAIIETLRAD----GAVAGAFRLRFDDPGPR---LR--- 119 (221)
T ss_pred --CcCHHHHHHHHHHh----ccCCEEEEEcCCCCCC-hhHHHHHHHHhhcC----CcEEEEEEeeecCCccc---hh---
Confidence 24689999999998 5799999999999997 99999987766654 23333322223222111 00
Q ss_pred HHHHHHHhhhhccCCcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccccccCCcCccc
Q 005037 341 IFNEVELQGLDGYGCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYERNTQWGKEM 420 (717)
Q Consensus 341 ~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~t~wG~~~ 420 (717)
................+.+.|.++||+++.+ +|+|+
T Consensus 120 -~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--------------~G~fd----------------------------- 155 (221)
T cd02522 120 -LLELGANLRSRLFGLPYGDQGLFIRRELFEE--------------LGGFP----------------------------- 155 (221)
T ss_pred -hhhhcccceecccCCCcCCceEEEEHHHHHH--------------hCCCC-----------------------------
Confidence 0111111111111223456678899999988 77554
Q ss_pred ccCCCCCcchHHHHHHHHhcCCeEEE
Q 005037 421 GLKYGCPAEDVVTGLSIQSRGWKSVY 446 (717)
Q Consensus 421 G~~~~svtED~~t~~rl~~~Gwrsvy 446 (717)
+....||+++++++..+|++..+
T Consensus 156 ---~~~~~ED~d~~~r~~~~G~~~~~ 178 (221)
T cd02522 156 ---ELPLMEDVELVRRLRRRGRPALL 178 (221)
T ss_pred ---ccccccHHHHHHHHHhCCCEEEc
Confidence 33368999999999999999876
No 47
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.67 E-value=2.4e-15 Score=147.17 Aligned_cols=174 Identities=18% Similarity=0.137 Sum_probs=121.6
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCchhhhhH
Q 005037 103 IFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPAAYFIN 182 (717)
Q Consensus 103 V~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 182 (717)
|+||+|| |+ ..+++||.|+++++|+ ..+|+|+|||++|.|.+.+.+..+ +
T Consensus 1 ivip~~n---~~-~~l~~~l~sl~~q~~~--~~eiivvdd~s~d~t~~~~~~~~~----------~-------------- 50 (182)
T cd06420 1 LIITTYN---RP-EALELVLKSVLNQSIL--PFEVIIADDGSTEETKELIEEFKS----------Q-------------- 50 (182)
T ss_pred CEEeecC---Ch-HHHHHHHHHHHhccCC--CCEEEEEeCCCchhHHHHHHHHHh----------h--------------
Confidence 6899999 66 6799999999999998 468999999999987543332100 0
Q ss_pred HHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccCCCCC
Q 005037 183 RLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKRPWHF 262 (717)
Q Consensus 183 ~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekrp~~~ 262 (717)
. . . .++++.+++.
T Consensus 51 ---------------------------~------------~-----------------------~-~~~~~~~~~~---- 63 (182)
T cd06420 51 ---------------------------F------------P-----------------------I-PIKHVWQEDE---- 63 (182)
T ss_pred ---------------------------c------------C-----------------------C-ceEEEEcCCc----
Confidence 0 0 0 1333433221
Q ss_pred CCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhhhhhHHHH
Q 005037 263 QNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELYSNSSRIF 342 (717)
Q Consensus 263 ~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f 342 (717)
..+|++|+|.+++. ++||+++++|+|.++. |++|++++..+ ++ .++ |.+++...+.+...
T Consensus 64 ~~~~~~~~n~g~~~----a~g~~i~~lD~D~~~~-~~~l~~~~~~~-~~----~~~-v~g~~~~~~~~~~~--------- 123 (182)
T cd06420 64 GFRKAKIRNKAIAA----AKGDYLIFIDGDCIPH-PDFIADHIELA-EP----GVF-LSGSRVLLNEKLTE--------- 123 (182)
T ss_pred chhHHHHHHHHHHH----hcCCEEEEEcCCcccC-HHHHHHHHHHh-CC----CcE-Eecceeecccccce---------
Confidence 24799999999998 6899999999999997 99999999887 43 344 34444333221110
Q ss_pred HHHHHhhhhccCCcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccccccCCcCccccc
Q 005037 343 NEVELQGLDGYGCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYERNTQWGKEMGL 422 (717)
Q Consensus 343 ~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~t~wG~~~G~ 422 (717)
..+.|+++.++|+.+.+ +|||++... +|
T Consensus 124 -------------~~~~~~~~~~~r~~~~~--------------~ggf~~~~~-------------------------~~ 151 (182)
T cd06420 124 -------------RGIRGCNMSFWKKDLLA--------------VNGFDEEFT-------------------------GW 151 (182)
T ss_pred -------------eEeccceEEEEHHHHHH--------------hCCCCcccc-------------------------cC
Confidence 23567778888888887 777654210 11
Q ss_pred CCCCCcchHHHHHHHHhcCCeEEEeCC
Q 005037 423 KYGCPAEDVVTGLSIQSRGWKSVYSKP 449 (717)
Q Consensus 423 ~~~svtED~~t~~rl~~~Gwrsvy~~~ 449 (717)
-.||+++++|+.++|++..++.+
T Consensus 152 ----~~eD~~l~~r~~~~g~~~~~~~~ 174 (182)
T cd06420 152 ----GGEDSELVARLLNSGIKFRKLKF 174 (182)
T ss_pred ----CcchHHHHHHHHHcCCcEEEecc
Confidence 26999999999999977766653
No 48
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.66 E-value=2.2e-15 Score=143.94 Aligned_cols=159 Identities=21% Similarity=0.204 Sum_probs=124.5
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCchhhhhH
Q 005037 103 IFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPAAYFIN 182 (717)
Q Consensus 103 V~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 182 (717)
|+||+|| |+ ..+.+|+.|+.+++|| ..+|+|+|||+++.|.+.+.+..
T Consensus 1 vii~~~~---~~-~~l~~~l~sl~~~~~~--~~~iiivdd~s~~~~~~~~~~~~-------------------------- 48 (166)
T cd04186 1 IIIVNYN---SL-EYLKACLDSLLAQTYP--DFEVIVVDNASTDGSVELLRELF-------------------------- 48 (166)
T ss_pred CEEEecC---CH-HHHHHHHHHHHhccCC--CeEEEEEECCCCchHHHHHHHhC--------------------------
Confidence 6899999 64 7899999999999996 56899999999997754333210
Q ss_pred HHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccCCCCC
Q 005037 183 RLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKRPWHF 262 (717)
Q Consensus 183 ~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekrp~~~ 262 (717)
+++.++..++
T Consensus 49 -----------------------------------------------------------------~~~~~~~~~~----- 58 (166)
T cd04186 49 -----------------------------------------------------------------PEVRLIRNGE----- 58 (166)
T ss_pred -----------------------------------------------------------------CCeEEEecCC-----
Confidence 0133343322
Q ss_pred CCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhhhhhHHHH
Q 005037 263 QNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELYSNSSRIF 342 (717)
Q Consensus 263 ~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f 342 (717)
..++++|+|.+++. +++|+++++|+|.++. |+++.+++..+.+. ++++++++.
T Consensus 59 ~~g~~~a~n~~~~~----~~~~~i~~~D~D~~~~-~~~l~~~~~~~~~~---~~~~~~~~~------------------- 111 (166)
T cd04186 59 NLGFGAGNNQGIRE----AKGDYVLLLNPDTVVE-PGALLELLDAAEQD---PDVGIVGPK------------------- 111 (166)
T ss_pred CcChHHHhhHHHhh----CCCCEEEEECCCcEEC-ccHHHHHHHHHHhC---CCceEEEcc-------------------
Confidence 46899999999998 5899999999999997 99999999876643 367777553
Q ss_pred HHHHHhhhhccCCcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccccccCCcCccccc
Q 005037 343 NEVELQGLDGYGCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYERNTQWGKEMGL 422 (717)
Q Consensus 343 ~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~t~wG~~~G~ 422 (717)
++|++.++||+++++ +|++++..
T Consensus 112 ---------------~~~~~~~~~~~~~~~--------------~~~~~~~~---------------------------- 134 (166)
T cd04186 112 ---------------VSGAFLLVRREVFEE--------------VGGFDEDF---------------------------- 134 (166)
T ss_pred ---------------CceeeEeeeHHHHHH--------------cCCCChhh----------------------------
Confidence 778899999999998 77655321
Q ss_pred CCCCCcchHHHHHHHHhcCCeEEEeCC
Q 005037 423 KYGCPAEDVVTGLSIQSRGWKSVYSKP 449 (717)
Q Consensus 423 ~~~svtED~~t~~rl~~~Gwrsvy~~~ 449 (717)
....||.+.++++..+||++.+++.
T Consensus 135 --~~~~eD~~~~~~~~~~g~~i~~~~~ 159 (166)
T cd04186 135 --FLYYEDVDLCLRARLAGYRVLYVPQ 159 (166)
T ss_pred --hccccHHHHHHHHHHcCCeEEEccc
Confidence 1146999999999999999999875
No 49
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.66 E-value=3e-15 Score=149.57 Aligned_cols=168 Identities=18% Similarity=0.119 Sum_probs=123.1
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCchhhhhH
Q 005037 103 IFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPAAYFIN 182 (717)
Q Consensus 103 V~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 182 (717)
|+||||| |+ ..+.+++.|+++++||. .+|+|+|||++|.|.+.+.+..+
T Consensus 1 viI~~~n---~~-~~l~~~l~sl~~q~~~~--~eiiivD~~s~d~t~~~~~~~~~------------------------- 49 (202)
T cd04185 1 AVVVTYN---RL-DLLKECLDALLAQTRPP--DHIIVIDNASTDGTAEWLTSLGD------------------------- 49 (202)
T ss_pred CEEEeeC---CH-HHHHHHHHHHHhccCCC--ceEEEEECCCCcchHHHHHHhcC-------------------------
Confidence 6899999 55 68999999999999994 58999999999987643322100
Q ss_pred HHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccCCCCC
Q 005037 183 RLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKRPWHF 262 (717)
Q Consensus 183 ~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekrp~~~ 262 (717)
+ .| +.++..++
T Consensus 50 ----------------------------------------~-----------------------~~-i~~~~~~~----- 60 (202)
T cd04185 50 ----------------------------------------L-----------------------DN-IVYLRLPE----- 60 (202)
T ss_pred ----------------------------------------C-----------------------Cc-eEEEECcc-----
Confidence 0 01 34444433
Q ss_pred CCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhhhhhHHHH
Q 005037 263 QNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELYSNSSRIF 342 (717)
Q Consensus 263 ~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f 342 (717)
..+++.++|.+++.+. ..++|+++++|+|.+++ |+++++++..+.++ +++++. |..+.. +.
T Consensus 61 n~g~~~~~n~~~~~a~-~~~~d~v~~ld~D~~~~-~~~l~~l~~~~~~~----~~~~~~-~~~~~~-~~----------- 121 (202)
T cd04185 61 NLGGAGGFYEGVRRAY-ELGYDWIWLMDDDAIPD-PDALEKLLAYADKD----NPQFLA-PLVLDP-DG----------- 121 (202)
T ss_pred ccchhhHHHHHHHHHh-ccCCCEEEEeCCCCCcC-hHHHHHHHHHHhcC----CceEec-ceeEcC-CC-----------
Confidence 3568889998888642 35799999999999997 99999999988865 567663 333321 10
Q ss_pred HHHHHhhhhccCCcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccccccCCcCccccc
Q 005037 343 NEVELQGLDGYGCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYERNTQWGKEMGL 422 (717)
Q Consensus 343 ~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~t~wG~~~G~ 422 (717)
+++|.++||+++.+ +|++++..
T Consensus 122 ----------------~~~~~~~~~~~~~~--------------~g~~~~~~---------------------------- 143 (202)
T cd04185 122 ----------------SFVGVLISRRVVEK--------------IGLPDKEF---------------------------- 143 (202)
T ss_pred ----------------ceEEEEEeHHHHHH--------------hCCCChhh----------------------------
Confidence 45678999999988 66554321
Q ss_pred CCCCCcchHHHHHHHHhcCCeEEEeCCC
Q 005037 423 KYGCPAEDVVTGLSIQSRGWKSVYSKPE 450 (717)
Q Consensus 423 ~~~svtED~~t~~rl~~~Gwrsvy~~~~ 450 (717)
....||.+.+.++..+|++. |++..
T Consensus 144 --~~~~eD~~~~~r~~~~G~~i-~~~~~ 168 (202)
T cd04185 144 --FIWGDDTEYTLRASKAGPGI-YVPDA 168 (202)
T ss_pred --hccchHHHHHHHHHHcCCcE-Eecce
Confidence 12359999999999999999 98864
No 50
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=99.66 E-value=3.5e-15 Score=150.93 Aligned_cols=195 Identities=16% Similarity=0.044 Sum_probs=126.6
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCchhhhhH
Q 005037 103 IFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPAAYFIN 182 (717)
Q Consensus 103 V~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 182 (717)
|+||+|| |+ ..+.+++.|+.++.|+ ..++|+|+||||+|.|.+.+.+-. +
T Consensus 1 ViIp~yn---~~-~~l~~~l~sl~~q~~~-~~~eiiiVDd~S~d~t~~~~~~~~----------~--------------- 50 (224)
T cd06442 1 IIIPTYN---ER-ENIPELIERLDAALKG-IDYEIIVVDDNSPDGTAEIVRELA----------K--------------- 50 (224)
T ss_pred CeEeccc---hh-hhHHHHHHHHHHhhcC-CCeEEEEEeCCCCCChHHHHHHHH----------H---------------
Confidence 6899999 55 5789999999999992 368999999999998864322210 0
Q ss_pred HHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccCCCCC
Q 005037 183 RLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKRPWHF 262 (717)
Q Consensus 183 ~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekrp~~~ 262 (717)
+ .|++.++..++
T Consensus 51 ----------------------------------------~-----------------------~~~i~~~~~~~----- 62 (224)
T cd06442 51 ----------------------------------------E-----------------------YPRVRLIVRPG----- 62 (224)
T ss_pred ----------------------------------------h-----------------------CCceEEEecCC-----
Confidence 0 11234444443
Q ss_pred CCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCC-cchhhhhh-HH
Q 005037 263 QNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVT-KNELYSNS-SR 340 (717)
Q Consensus 263 ~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~-~~d~~~~~-~~ 340 (717)
+.||++|+|.|++. +.||+|+++|+|..+. |++|..++..+.++ +.++|.++....... .+..+... ..
T Consensus 63 n~G~~~a~n~g~~~----a~gd~i~~lD~D~~~~-~~~l~~l~~~~~~~----~~~~v~g~~~~~~~~~~~~~~~~~~~~ 133 (224)
T cd06442 63 KRGLGSAYIEGFKA----ARGDVIVVMDADLSHP-PEYIPELLEAQLEG----GADLVIGSRYVEGGGVEGWGLKRKLIS 133 (224)
T ss_pred CCChHHHHHHHHHH----cCCCEEEEEECCCCCC-HHHHHHHHHHHhcC----CCCEEEEeeeecCCccCCCcHHHHHHH
Confidence 47899999999998 6899999999999996 99999999987665 244555543222111 11111100 00
Q ss_pred HHHHHHHhhhhccCCcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccccccCCcCccc
Q 005037 341 IFNEVELQGLDGYGCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYERNTQWGKEM 420 (717)
Q Consensus 341 ~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~t~wG~~~ 420 (717)
........-....+.....|++.++||+++++ +|.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--------------ig~------------------------------- 168 (224)
T cd06442 134 RGANLLARLLLGRKVSDPTSGFRAYRREVLEK--------------LID------------------------------- 168 (224)
T ss_pred HHHHHHHHHHcCCCCCCCCCccchhhHHHHHH--------------Hhh-------------------------------
Confidence 00111111111223344567777899999988 430
Q ss_pred ccCCCCCcchHHHHHHHHhcCCeEEEeCC
Q 005037 421 GLKYGCPAEDVVTGLSIQSRGWKSVYSKP 449 (717)
Q Consensus 421 G~~~~svtED~~t~~rl~~~Gwrsvy~~~ 449 (717)
++......+|.++.+++...||++.+.+.
T Consensus 169 ~~~~~~~~~~~~l~~~~~~~g~~i~~~p~ 197 (224)
T cd06442 169 SLVSKGYKFQLELLVRARRLGYRIVEVPI 197 (224)
T ss_pred hccCCCcEEeHHHHHHHHHcCCeEEEeCe
Confidence 11111236678899999999999999874
No 51
>PRK10073 putative glycosyl transferase; Provisional
Probab=99.64 E-value=2.4e-15 Score=163.29 Aligned_cols=199 Identities=13% Similarity=0.137 Sum_probs=130.0
Q ss_pred CCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCch
Q 005037 98 LPGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPA 177 (717)
Q Consensus 98 ~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~ 177 (717)
.|.|+|+||+|| ++ ..+.+|+.|+++++|| .++|+|+||||+|.|.+.+.+.+ ++
T Consensus 5 ~p~vSVIIP~yN---~~-~~L~~~l~Sl~~Qt~~--~~EIIiVdDgStD~t~~i~~~~~----------~~--------- 59 (328)
T PRK10073 5 TPKLSIIIPLYN---AG-KDFRAFMESLIAQTWT--ALEIIIVNDGSTDNSVEIAKHYA----------EN--------- 59 (328)
T ss_pred CCeEEEEEeccC---CH-HHHHHHHHHHHhCCCC--CeEEEEEeCCCCccHHHHHHHHH----------hh---------
Confidence 589999999999 44 6899999999999998 68999999999998865433211 00
Q ss_pred hhhhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeecc
Q 005037 178 AYFINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREK 257 (717)
Q Consensus 178 ~yf~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rek 257 (717)
.|++.+++.+
T Consensus 60 ---------------------------------------------------------------------~~~i~vi~~~- 69 (328)
T PRK10073 60 ---------------------------------------------------------------------YPHVRLLHQA- 69 (328)
T ss_pred ---------------------------------------------------------------------CCCEEEEECC-
Confidence 1235555432
Q ss_pred CCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcc-----
Q 005037 258 RPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKN----- 332 (717)
Q Consensus 258 rp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~----- 332 (717)
..|.++|.|.|++. ++||||+++|+|..+. |+.+.+++..+.++ +.+++....-..+.+....
T Consensus 70 -----n~G~~~arN~gl~~----a~g~yi~flD~DD~~~-p~~l~~l~~~~~~~--~~dvv~~~~~~~~~~~~~~~~~~~ 137 (328)
T PRK10073 70 -----NAGVSVARNTGLAV----ATGKYVAFPDADDVVY-PTMYETLMTMALED--DLDVAQCNADWCFRDTGETWQSIP 137 (328)
T ss_pred -----CCChHHHHHHHHHh----CCCCEEEEECCCCccC-hhHHHHHHHHHHhC--CCCEEEEccEEEEeCCCccccccc
Confidence 36899999999998 7999999999999997 99999999887654 2344433221111111100
Q ss_pred -hhhhhhHHHH--HHHHHhhhhccCCcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhccccc
Q 005037 333 -ELYSNSSRIF--NEVELQGLDGYGCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCT 409 (717)
Q Consensus 333 -d~~~~~~~~f--~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~ 409 (717)
+..... .++ .+.+......... ....-+.++||+.+.+ .|
T Consensus 138 ~~~~~~~-~~~~~~~~l~~~l~~~~~-~~~~~~~l~Rr~~l~~--------------~~--------------------- 180 (328)
T PRK10073 138 SDRLRST-GVLSGPDWLRMALSSRRW-THVVWLGVYRRDFIVK--------------NN--------------------- 180 (328)
T ss_pred ccccccc-ceechHHHHHHHHhhCCC-CccHhHHHHHHHHHHH--------------cC---------------------
Confidence 000000 000 0011111111110 1112245899998886 32
Q ss_pred ccccCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCC
Q 005037 410 YERNTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPE 450 (717)
Q Consensus 410 Ye~~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~ 450 (717)
..|+.+...||+...+++..++.++.|+++.
T Consensus 181 ----------~~f~~~~~~eD~~~~~~~~~~~~~v~~~~~~ 211 (328)
T PRK10073 181 ----------IKFEPGLHHQDIPWTTEVMFNALRVRYTEQS 211 (328)
T ss_pred ----------CccCCCCEeccHHHHHHHHHHCCEEEEECCC
Confidence 1344555579999999999999999999864
No 52
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=99.62 E-value=3.8e-13 Score=152.14 Aligned_cols=166 Identities=16% Similarity=0.122 Sum_probs=107.9
Q ss_pred CCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhhhhhHHHHH---HHHHhhhhccCCcc
Q 005037 281 SNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELYSNSSRIFN---EVELQGLDGYGCPL 357 (717)
Q Consensus 281 t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~---~~~~~g~d~~~~~~ 357 (717)
...|||+.+|||+.+. |+.+.+++.-+.+ +++++.|.+.-+..|...+. ...-|...| +...++.++.-|.+
T Consensus 200 ~~~~~il~~DaDt~~~-p~~~~~lv~~m~~---d~~i~gvCG~t~i~n~~~s~-~t~~Q~fEY~ish~l~Ka~Es~fG~V 274 (527)
T PF03142_consen 200 DFYEYILMVDADTKFD-PDSVNRLVDAMER---DPKIGGVCGETRIDNKGQSW-WTMYQVFEYAISHHLQKAFESVFGSV 274 (527)
T ss_pred cceEEEEEecCCceEc-HHHHHHHHHHHcC---CCCeEEEeceeEEcCCCCCH-hhheeccchhHHHHHHHHHHHHhCce
Confidence 3569999999999996 9999999988863 23799998876666654332 111122222 34556666655655
Q ss_pred cc--cccceEehhhhccCCC-------CchhhHhhhccCCCccchhhhhHHHhhhhcccccccccCCcCcccccCCCCCc
Q 005037 358 YT--GSGCFHRREILCGSKY-------NKETKIEWKSKKDSKGEESLLDLEETSKALASCTYERNTQWGKEMGLKYGCPA 428 (717)
Q Consensus 358 ~~--Gtg~~~RR~aL~~~~~-------~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~t~wG~~~G~~~~svt 428 (717)
.| |..+++|-++++..+- .+++-++.. +...+.+.+ + .-..+.
T Consensus 275 tCLPGcfsmyR~~a~~~~~~~~~p~l~~~~i~~~Y~-------~~~~dtlh~----------~-----------nl~~lG 326 (527)
T PF03142_consen 275 TCLPGCFSMYRISALMDGDGYWVPLLISPDIIEKYS-------ENPVDTLHQ----------K-----------NLLDLG 326 (527)
T ss_pred eecCCcceeeeeehhccccccccccccchHHHHHHh-------hccchHHHH----------H-----------hhhhcc
Confidence 43 7777899999876100 000000100 000000000 0 001478
Q ss_pred chHHHHHHHHhc--CCeEEEeCCCCccccccCCcCHHHHHHHHHHHhcchHHHHH
Q 005037 429 EDVVTGLSIQSR--GWKSVYSKPERDAFLGVSPTTLLQLLVQHKRWSEGNFQIFI 481 (717)
Q Consensus 429 ED~~t~~rl~~~--Gwrsvy~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G~lqil~ 481 (717)
||-.++-.|.++ |||..|++.+ .| .+.+|+|++.+++||+||..|++-.++
T Consensus 327 EDR~LttLlLk~~~~~k~~y~~~A-~a-~T~aP~t~~vflsQRRRWinSTi~Nl~ 379 (527)
T PF03142_consen 327 EDRWLTTLLLKQFPGYKTEYVPSA-VA-YTDAPETFSVFLSQRRRWINSTIHNLF 379 (527)
T ss_pred hhHHHHHHHHhhCCCceEEEcccc-cc-cccCCccHHHHHHHhhhccchhHhhHh
Confidence 999888777776 8999999864 35 799999999999999999999986644
No 53
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=99.60 E-value=1.3e-14 Score=143.76 Aligned_cols=156 Identities=18% Similarity=0.196 Sum_probs=116.5
Q ss_pred CCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhhhhhHHHH
Q 005037 263 QNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELYSNSSRIF 342 (717)
Q Consensus 263 ~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f 342 (717)
.+.|.+||..+++. . +++|+++++|+|..++ |++|++++..+.|| ++|+|.++....+.+. ..+.....+
T Consensus 15 ~N~Kv~nL~~~~~~-~--a~~d~~~~~DsDi~v~-p~~L~~lv~~l~~p----~vglVt~~~~~~~~~~--~~~~l~~~~ 84 (175)
T PF13506_consen 15 CNPKVNNLAQGLEA-G--AKYDYLVISDSDIRVP-PDYLRELVAPLADP----GVGLVTGLPRGVPARG--FWSRLEAAF 84 (175)
T ss_pred CChHHHHHHHHHHh-h--CCCCEEEEECCCeeEC-HHHHHHHHHHHhCC----CCcEEEecccccCCcC--HHHHHHHHH
Confidence 57899999999986 1 6899999999999997 99999999999997 6999987666554332 122222222
Q ss_pred HHHHHhhhh-ccCCcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccccccCCcCcccc
Q 005037 343 NEVELQGLD-GYGCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYERNTQWGKEMG 421 (717)
Q Consensus 343 ~~~~~~g~d-~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~t~wG~~~G 421 (717)
+.....-.. .-+..++.|..+++||++|++ +|||..-.
T Consensus 85 ~~~~~~~~~a~~~~~~~~G~~m~~rr~~L~~--------------~GG~~~l~--------------------------- 123 (175)
T PF13506_consen 85 FNFLPGVLQALGGAPFAWGGSMAFRREALEE--------------IGGFEALA--------------------------- 123 (175)
T ss_pred HhHHHHHHHHhcCCCceecceeeeEHHHHHH--------------cccHHHHh---------------------------
Confidence 221111111 224567889999999999998 88775321
Q ss_pred cCCCCCcchHHHHHHHHhcCCeEEEeCCCCccccccCC----cCHHHHHHHHHHHhc
Q 005037 422 LKYGCPAEDVVTGLSIQSRGWKSVYSKPERDAFLGVSP----TTLLQLLVQHKRWSE 474 (717)
Q Consensus 422 ~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a~~g~aP----~tl~~~~~Qr~RWa~ 474 (717)
+.++||+.+|-+++++||+++..+.. +.....| .+++++++++.||++
T Consensus 124 ---~~ladD~~l~~~~~~~G~~v~~~~~~--v~~~~~~~~~~~s~~~~~~r~~RW~r 175 (175)
T PF13506_consen 124 ---DYLADDYALGRRLRARGYRVVLSPYP--VVQTSVPRTLEDSFRDFFRRQLRWAR 175 (175)
T ss_pred ---hhhhHHHHHHHHHHHCCCeEEEcchh--eeecccCccccccHHHHHHHHHhhcC
Confidence 25899999999999999999998742 3345555 489999999999985
No 54
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=99.58 E-value=7.6e-15 Score=139.56 Aligned_cols=162 Identities=27% Similarity=0.344 Sum_probs=106.9
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCchhhhhH
Q 005037 103 IFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPAAYFIN 182 (717)
Q Consensus 103 V~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 182 (717)
|+||+|| |+ +.+.+|+.|++++.|+ ..+|+|+|||++|.|.+.+.+... +
T Consensus 1 Viip~~n---~~-~~l~~~l~sl~~q~~~--~~~iivvdd~s~d~t~~~~~~~~~----------~-------------- 50 (180)
T cd06423 1 IIVPAYN---EE-AVIERTIESLLALDYP--KLEVIVVDDGSTDDTLEILEELAA----------L-------------- 50 (180)
T ss_pred CeecccC---hH-HHHHHHHHHHHhCCCC--ceEEEEEeCCCccchHHHHHHHhc----------c--------------
Confidence 6899999 66 7999999999999996 678999999999987643322100 0
Q ss_pred HHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccCCCCC
Q 005037 183 RLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKRPWHF 262 (717)
Q Consensus 183 ~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekrp~~~ 262 (717)
. .+...++..++
T Consensus 51 -----------------------------------------~----------------------~~~~~~~~~~~----- 62 (180)
T cd06423 51 -----------------------------------------Y----------------------IRRVLVVRDKE----- 62 (180)
T ss_pred -----------------------------------------c----------------------cceEEEEEecc-----
Confidence 0 01144444433
Q ss_pred CCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhh-ccCCCCeEEEEeccceeccCCcchhhhhhHHH
Q 005037 263 QNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFI-DEEKGHEVAFVQFPQNFDNVTKNELYSNSSRI 341 (717)
Q Consensus 263 ~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~-d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~ 341 (717)
..+|+.|+|.+++. +++|+++++|+|..+. |++|.+++..+. ++ +++.|++.....+...+ ........
T Consensus 63 ~~g~~~~~n~~~~~----~~~~~i~~~D~D~~~~-~~~l~~~~~~~~~~~----~~~~v~~~~~~~~~~~~-~~~~~~~~ 132 (180)
T cd06423 63 NGGKAGALNAGLRH----AKGDIVVVLDADTILE-PDALKRLVVPFFADP----KVGAVQGRVRVRNGSEN-LLTRLQAI 132 (180)
T ss_pred cCCchHHHHHHHHh----cCCCEEEEECCCCCcC-hHHHHHHHHHhccCC----CeeeEeeeEEEecCcCc-ceeccchh
Confidence 46899999999998 5899999999999997 999999955444 44 67777665544332211 11111111
Q ss_pred HH----HHHHhhhhccC-CcccccccceEehhhhcc
Q 005037 342 FN----EVELQGLDGYG-CPLYTGSGCFHRREILCG 372 (717)
Q Consensus 342 f~----~~~~~g~d~~~-~~~~~Gtg~~~RR~aL~~ 372 (717)
.+ .....+..... ...+.|+++++||+++++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 168 (180)
T cd06423 133 EYLSIFRLGRRAQSALGGVLVLSGAFGAFRREALRE 168 (180)
T ss_pred eecceeeeeeehhheecceeecCchHHHHHHHHHHH
Confidence 11 01111111122 245689999999999998
No 55
>PRK10063 putative glycosyl transferase; Provisional
Probab=99.57 E-value=1.2e-13 Score=144.12 Aligned_cols=190 Identities=12% Similarity=-0.021 Sum_probs=118.2
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHcCC-CCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCch
Q 005037 99 PGVDIFVCTADPKIEPPMMVINTVLSVMAYD-YPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPA 177 (717)
Q Consensus 99 P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~d-YP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~ 177 (717)
|.|+|+||||| |+ +.+++|+.|+.++. .+...++|+|+||||+|.|.+.+.+.. +
T Consensus 1 ~~vSVIi~~yN---~~-~~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~i~~~~~----------~---------- 56 (248)
T PRK10063 1 MLLSVITVAFR---NL-EGIVKTHASLRHLAQDPGISFEWIVVDGGSNDGTREFLENLN----------G---------- 56 (248)
T ss_pred CeEEEEEEeCC---CH-HHHHHHHHHHHHHHhCCCCCEEEEEEECcCcccHHHHHHHhc----------c----------
Confidence 67999999999 43 58999999998642 233378999999999999875433210 0
Q ss_pred hhhhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeecc
Q 005037 178 AYFINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREK 257 (717)
Q Consensus 178 ~yf~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rek 257 (717)
+ +++.+++. +
T Consensus 57 ---------------------------------------------~------------------------~~i~~i~~-~ 66 (248)
T PRK10063 57 ---------------------------------------------I------------------------FNLRFVSE-P 66 (248)
T ss_pred ---------------------------------------------c------------------------CCEEEEEC-C
Confidence 0 01445542 2
Q ss_pred CCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhhhh
Q 005037 258 RPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELYSN 337 (717)
Q Consensus 258 rp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~ 337 (717)
.+|+++|+|.|++. ++||+|+++|+|.... |+.++........+ +...++ +.......+.+. ...
T Consensus 67 -----~~G~~~A~N~Gi~~----a~g~~v~~ld~DD~~~-~~~~~~~~~~~~~~---~~~~v~-g~~~~~~~~~~~-~~~ 131 (248)
T PRK10063 67 -----DNGIYDAMNKGIAM----AQGRFALFLNSGDIFH-QDAANFVRQLKMQK---DNAMII-GDALLDFGDGHK-IKR 131 (248)
T ss_pred -----CCCHHHHHHHHHHH----cCCCEEEEEeCCcccC-cCHHHHHHHHHhCC---CCeEEE-eeeEEEcCCCcE-EEE
Confidence 25899999999998 6899999999999997 88765433333222 233333 322211111110 000
Q ss_pred hHHHHHHHHHhhhhccCCcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccccccCCcC
Q 005037 338 SSRIFNEVELQGLDGYGCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYERNTQWG 417 (717)
Q Consensus 338 ~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~t~wG 417 (717)
.. ... .........++.+.++||+.+.. |+|++.
T Consensus 132 ~~--~~~-----~~~~~~~~~~~~~~~~~~~~~~~---------------~~fd~~------------------------ 165 (248)
T PRK10063 132 SA--KPG-----WYIYHSLPASHQAIFFPVSGLKK---------------WRYDLQ------------------------ 165 (248)
T ss_pred cc--CCh-----hHHhcCCCCCCcEEEEEHHHHhc---------------CCCCcc------------------------
Confidence 00 000 00011112456678899987764 223210
Q ss_pred cccccCCCCCcchHHHHHHHHhcCCeEEEeCCC
Q 005037 418 KEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPE 450 (717)
Q Consensus 418 ~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~ 450 (717)
....||.++.+++..+|++..+++..
T Consensus 166 -------~~~~~Dydl~lrl~~~g~~~~~v~~~ 191 (248)
T PRK10063 166 -------YKVSSDYALAARLYKAGYAFKKLNGL 191 (248)
T ss_pred -------cchHHhHHHHHHHHHcCCcEEEcCce
Confidence 12579999999999999999999854
No 56
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=99.57 E-value=6.9e-14 Score=141.12 Aligned_cols=195 Identities=16% Similarity=0.036 Sum_probs=121.7
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCC--CCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCchhhh
Q 005037 103 IFVCTADPKIEPPMMVINTVLSVMAYDY--PTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPAAYF 180 (717)
Q Consensus 103 V~I~t~n~~~Ep~~~v~~Tv~s~la~dY--P~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf 180 (717)
|+||+|| |+ ..+.+++.+++++.+ +....+|+|+||||+|.|.+.+.+. +++
T Consensus 1 iiip~yN---~~-~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~t~~~~~~~----------~~~------------ 54 (211)
T cd04188 1 VVIPAYN---EE-KRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDGTAEVARKL----------ARK------------ 54 (211)
T ss_pred CEEcccC---hH-HHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCchHHHHHHH----------HHh------------
Confidence 6899999 54 578999999998865 4447899999999999886533321 000
Q ss_pred hHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccCCC
Q 005037 181 INRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKRPW 260 (717)
Q Consensus 181 ~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekrp~ 260 (717)
++. .+.++..++
T Consensus 55 -------------------------------------------~~~----------------------~i~~i~~~~--- 66 (211)
T cd04188 55 -------------------------------------------NPA----------------------LIRVLTLPK--- 66 (211)
T ss_pred -------------------------------------------CCC----------------------cEEEEEccc---
Confidence 010 024444333
Q ss_pred CCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCC--cc-hhhhh
Q 005037 261 HFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVT--KN-ELYSN 337 (717)
Q Consensus 261 ~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~--~~-d~~~~ 337 (717)
..||++|+|.|++. ++||+|+++|+|...+ |+++.+++..+.++ ...+|.+.......+ .. ..+..
T Consensus 67 --n~G~~~a~~~g~~~----a~gd~i~~ld~D~~~~-~~~l~~l~~~~~~~----~~~~v~g~r~~~~~~~~~~~~~~~~ 135 (211)
T cd04188 67 --NRGKGGAVRAGMLA----ARGDYILFADADLATP-FEELEKLEEALKTS----GYDIAIGSRAHLASAAVVKRSWLRN 135 (211)
T ss_pred --CCCcHHHHHHHHHH----hcCCEEEEEeCCCCCC-HHHHHHHHHHHhcc----CCcEEEEEeeccCCcccccccHHHH
Confidence 25799999999998 6899999999999997 99999999986654 234454443322211 10 11111
Q ss_pred hHHHHHHHHHhhhhccCCcccccc-cceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccccccCCc
Q 005037 338 SSRIFNEVELQGLDGYGCPLYTGS-GCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYERNTQW 416 (717)
Q Consensus 338 ~~~~f~~~~~~g~d~~~~~~~~Gt-g~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~t~w 416 (717)
.....+........+.... -+.+ ..++||+++.+ +++...
T Consensus 136 ~~~~~~~~~~~~~~~~~~~-d~~~g~~~~~r~~~~~--------------~~~~~~------------------------ 176 (211)
T cd04188 136 LLGRGFNFLVRLLLGLGIK-DTQCGFKLFTRDAARR--------------LFPRLH------------------------ 176 (211)
T ss_pred HHHHHHHHHHHHHcCCCCc-ccccCceeEcHHHHHH--------------HHhhhh------------------------
Confidence 1111111121222122111 1222 36899999886 221000
Q ss_pred CcccccCCCCCcchHHHHHHHHhcCCeEEEeC
Q 005037 417 GKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSK 448 (717)
Q Consensus 417 G~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~ 448 (717)
.-|| .+|+++.+++...||++.+++
T Consensus 177 --~~~~-----~~d~el~~r~~~~g~~~~~vp 201 (211)
T cd04188 177 --LERW-----AFDVELLVLARRLGYPIEEVP 201 (211)
T ss_pred --ccce-----EeeHHHHHHHHHcCCeEEEcC
Confidence 0133 579999999999999999987
No 57
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=99.56 E-value=6.6e-15 Score=139.86 Aligned_cols=165 Identities=18% Similarity=0.178 Sum_probs=111.2
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCchhhhh
Q 005037 102 DIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPAAYFI 181 (717)
Q Consensus 102 dV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 181 (717)
+|+||||| |+ +.+.+|+.|++.+.++ ..+|+|+|||++|.|.+.+.+..+
T Consensus 1 Svvip~~n---~~-~~l~~~l~sl~~q~~~--~~eiivvdd~s~d~~~~~~~~~~~------------------------ 50 (169)
T PF00535_consen 1 SVVIPTYN---EA-EYLERTLESLLKQTDP--DFEIIVVDDGSTDETEEILEEYAE------------------------ 50 (169)
T ss_dssp EEEEEESS----T-TTHHHHHHHHHHHSGC--EEEEEEEECS-SSSHHHHHHHHHC------------------------
T ss_pred CEEEEeeC---CH-HHHHHHHHHHhhccCC--CEEEEEeccccccccccccccccc------------------------
Confidence 69999999 53 6899999999999666 679999999999988654433210
Q ss_pred HHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccCCCC
Q 005037 182 NRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKRPWH 261 (717)
Q Consensus 182 ~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekrp~~ 261 (717)
..+++.|+.++++
T Consensus 51 ----------------------------------------------------------------~~~~i~~i~~~~n--- 63 (169)
T PF00535_consen 51 ----------------------------------------------------------------SDPNIRYIRNPEN--- 63 (169)
T ss_dssp ----------------------------------------------------------------CSTTEEEEEHCCC---
T ss_pred ----------------------------------------------------------------ccccccccccccc---
Confidence 0123788888653
Q ss_pred CCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchh-hh-hhH
Q 005037 262 FQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNEL-YS-NSS 339 (717)
Q Consensus 262 ~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~-~~-~~~ 339 (717)
.++++|+|.|++. +++||++++|+|.++. |++|.+++..+.+.. ..+..........+...... .. ...
T Consensus 64 --~g~~~~~n~~~~~----a~~~~i~~ld~D~~~~-~~~l~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (169)
T PF00535_consen 64 --LGFSAARNRGIKH----AKGEYILFLDDDDIIS-PDWLEELVEALEKNP--PDVVIGSVIYIDDDNRYPDRRLRFSFW 134 (169)
T ss_dssp --SHHHHHHHHHHHH------SSEEEEEETTEEE--TTHHHHHHHHHHHCT--TEEEEEEEEEEECTTETEECCCTSEEE
T ss_pred --ccccccccccccc----cceeEEEEeCCCceEc-HHHHHHHHHHHHhCC--CcEEEEEEEEecCCccccccccchhhh
Confidence 4899999999998 6899999999999997 999999999998742 23333333222222111110 00 000
Q ss_pred HHHHHHHHhhhhccCCcccccccceEehhhhcc
Q 005037 340 RIFNEVELQGLDGYGCPLYTGSGCFHRREILCG 372 (717)
Q Consensus 340 ~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~ 372 (717)
...+..............++|+++++||+++++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~ 167 (169)
T PF00535_consen 135 NRFERKIFNNIRFWKISFFIGSCALFRRSVFEE 167 (169)
T ss_dssp ECCHCHHHHTTHSTTSSEESSSCEEEEEHHHHH
T ss_pred hhhhhHHHHhhhcCCcccccccEEEEEHHHHHh
Confidence 122223334445556778899999999999987
No 58
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.56 E-value=2.4e-14 Score=146.34 Aligned_cols=145 Identities=17% Similarity=0.113 Sum_probs=88.9
Q ss_pred EEEEeeccCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHH---HHhhccCCCCeEEEEecccee
Q 005037 250 LVYLAREKRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDAL---CFFIDEEKGHEVAFVQFPQNF 326 (717)
Q Consensus 250 l~yv~Rekrp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v---~~f~d~~~~~~vg~VQ~Pq~f 326 (717)
+.++..++ ..|+++|+|.|++.+.. .++|+++++|+|..++ |++|.+++ ..+.+ +++++.+ +|+..
T Consensus 49 i~~i~~~~-----n~G~~~a~N~g~~~a~~-~~~d~v~~lD~D~~~~-~~~l~~l~~~~~~~~~---~~~~~~~-~~~~~ 117 (237)
T cd02526 49 IELIHLGE-----NLGIAKALNIGIKAALE-NGADYVLLFDQDSVPP-PDMVEKLLAYKILSDK---NSNIGAV-GPRII 117 (237)
T ss_pred EEEEECCC-----ceehHHhhhHHHHHHHh-CCCCEEEEECCCCCcC-HhHHHHHHHHHHhhcc---CCCeEEE-eeeEE
Confidence 55665544 35699999999998421 1459999999999997 99999995 22221 2356655 44443
Q ss_pred ccCCcchhhhhhHHH-HHHHHHhhhhc-cCCcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhh
Q 005037 327 DNVTKNELYSNSSRI-FNEVELQGLDG-YGCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKA 404 (717)
Q Consensus 327 ~n~~~~d~~~~~~~~-f~~~~~~g~d~-~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~ 404 (717)
............... ........... .......|+|+++||++++. +|||++..
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~--------------~ggfd~~~---------- 173 (237)
T cd02526 118 DRRTGENSPGVRKSGYKLRIQKEGEEGLKEVDFLITSGSLISLEALEK--------------VGGFDEDL---------- 173 (237)
T ss_pred cCCCCeeccceeccCccceecccccCCceEeeeeeccceEEcHHHHHH--------------hCCCCHHH----------
Confidence 322111100000000 00000000111 12234568899999999998 88776431
Q ss_pred cccccccccCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCC
Q 005037 405 LASCTYERNTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKP 449 (717)
Q Consensus 405 v~~c~Ye~~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~ 449 (717)
+ .-.||++.++|+..+||+..|++.
T Consensus 174 -----------------~---~~~eD~d~~~r~~~~G~~~~~~~~ 198 (237)
T cd02526 174 -----------------F---IDYVDTEWCLRARSKGYKIYVVPD 198 (237)
T ss_pred -----------------c---CccchHHHHHHHHHcCCcEEEEcC
Confidence 0 115899999999999999999985
No 59
>PRK10018 putative glycosyl transferase; Provisional
Probab=99.55 E-value=2.4e-13 Score=144.38 Aligned_cols=110 Identities=19% Similarity=0.271 Sum_probs=85.5
Q ss_pred CCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCc
Q 005037 97 KLPGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSP 176 (717)
Q Consensus 97 ~~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p 176 (717)
+.|.|+|+||||| ++ ..+.+||.|+++++|| .++|+|+||||++ .+.+.+. ++++
T Consensus 3 ~~p~VSVIip~yN---~~-~~l~~~l~Svl~Qt~~--~~EiIVVDDgS~~--~~~~~~~----------~~~~------- 57 (279)
T PRK10018 3 DNPLISIYMPTWN---RQ-QLAIRAIKSVLRQDYS--NWEMIIVDDCSTS--WEQLQQY----------VTAL------- 57 (279)
T ss_pred CCCEEEEEEEeCC---CH-HHHHHHHHHHHhCCCC--CeEEEEEECCCCC--HHHHHHH----------HHHc-------
Confidence 4689999999999 54 4678999999999999 5899999999984 2211111 0000
Q ss_pred hhhhhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeec
Q 005037 177 AAYFINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLARE 256 (717)
Q Consensus 177 ~~yf~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Re 256 (717)
.-|++.|+..+
T Consensus 58 ---------------------------------------------------------------------~~~ri~~i~~~ 68 (279)
T PRK10018 58 ---------------------------------------------------------------------NDPRITYIHND 68 (279)
T ss_pred ---------------------------------------------------------------------CCCCEEEEECC
Confidence 01246777654
Q ss_pred cCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhc
Q 005037 257 KRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFID 310 (717)
Q Consensus 257 krp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d 310 (717)
+ ..|++.|+|.|++. ++||+|+++|+|.... |+.|.+++.++..
T Consensus 69 ~-----n~G~~~a~N~gi~~----a~g~~I~~lDaDD~~~-p~~l~~~~~~~~~ 112 (279)
T PRK10018 69 I-----NSGACAVRNQAIML----AQGEYITGIDDDDEWT-PNRLSVFLAHKQQ 112 (279)
T ss_pred C-----CCCHHHHHHHHHHH----cCCCEEEEECCCCCCC-ccHHHHHHHHHHh
Confidence 3 47899999999998 6999999999999997 9999999987764
No 60
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=99.51 E-value=1.4e-13 Score=134.81 Aligned_cols=164 Identities=15% Similarity=0.111 Sum_probs=109.2
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCchhhhhH
Q 005037 103 IFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPAAYFIN 182 (717)
Q Consensus 103 V~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 182 (717)
|+||+|| |+ ..+.+|+.|+.++.|+....+|+|+|||++|.|.+.+.+...
T Consensus 1 iii~~~n---~~-~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~~~~------------------------- 51 (185)
T cd04179 1 VVIPAYN---EE-ENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIARELAA------------------------- 51 (185)
T ss_pred CeecccC---hH-hhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHHHHH-------------------------
Confidence 6899999 54 689999999999999656789999999999987653332100
Q ss_pred HHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccCCCCC
Q 005037 183 RLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKRPWHF 262 (717)
Q Consensus 183 ~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekrp~~~ 262 (717)
..|.+.++..+++
T Consensus 52 ---------------------------------------------------------------~~~~~~~~~~~~n---- 64 (185)
T cd04179 52 ---------------------------------------------------------------RVPRVRVIRLSRN---- 64 (185)
T ss_pred ---------------------------------------------------------------hCCCeEEEEccCC----
Confidence 0112344444432
Q ss_pred CCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCc-chhhhhhHHH
Q 005037 263 QNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTK-NELYSNSSRI 341 (717)
Q Consensus 263 ~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~-~d~~~~~~~~ 341 (717)
.+|++|+|.+++. +.||+++++|+|..+. |++|.+++..+.++ +.++|+++....+... ...+......
T Consensus 65 -~G~~~a~n~g~~~----a~gd~i~~lD~D~~~~-~~~l~~l~~~~~~~----~~~~v~g~~~~~~~~~~~~~~~~~~~~ 134 (185)
T cd04179 65 -FGKGAAVRAGFKA----ARGDIVVTMDADLQHP-PEDIPKLLEKLLEG----GADVVIGSRFVRGGGAGMPLLRRLGSR 134 (185)
T ss_pred -CCccHHHHHHHHH----hcCCEEEEEeCCCCCC-HHHHHHHHHHHhcc----CCcEEEEEeecCCCcccchHHHHHHHH
Confidence 5799999999998 6889999999999996 99999999986654 3566776655443221 1111111111
Q ss_pred HHHHHHhhhhccCCcccccccceEehhhhcc
Q 005037 342 FNEVELQGLDGYGCPLYTGSGCFHRREILCG 372 (717)
Q Consensus 342 f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~ 372 (717)
.+................|.+.++||+++++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 165 (185)
T cd04179 135 LFNFLIRLLLGVRISDTQSGFRLFRREVLEA 165 (185)
T ss_pred HHHHHHHHHcCCCCcCCCCceeeeHHHHHHH
Confidence 1111122222223334456667899999998
No 61
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=99.49 E-value=5.1e-12 Score=137.58 Aligned_cols=129 Identities=17% Similarity=0.136 Sum_probs=90.9
Q ss_pred CCCCceEEEEecCCCCCCChHHHHHHHHHHHcC------CCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhc
Q 005037 96 DKLPGVDIFVCTADPKIEPPMMVINTVLSVMAY------DYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKF 169 (717)
Q Consensus 96 ~~~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~------dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~ 169 (717)
...|.|+|+||+||| . ..+..++.++.++ ++|...++|+|+||||+|.|.+.+.+.+ +++
T Consensus 67 ~~~~~isVVIP~yNe---~-~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~i~~~~~----------~~~ 132 (333)
T PTZ00260 67 DSDVDLSIVIPAYNE---E-DRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKDFW----------RQN 132 (333)
T ss_pred CCCeEEEEEEeeCCC---H-HHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHHHHHHHH----------Hhc
Confidence 457899999999994 4 4688888887763 2455578999999999999976443311 110
Q ss_pred CCCCCCchhhhhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCe
Q 005037 170 NVEPRSPAAYFINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPT 249 (717)
Q Consensus 170 ~v~~r~p~~yf~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~ 249 (717)
. .+ -+.
T Consensus 133 ~-----------------------------------------------------~~---------------------~~~ 138 (333)
T PTZ00260 133 I-----------------------------------------------------NP---------------------NID 138 (333)
T ss_pred C-----------------------------------------------------CC---------------------CCc
Confidence 0 00 011
Q ss_pred EEEEeeccCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEecc
Q 005037 250 LVYLAREKRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFP 323 (717)
Q Consensus 250 l~yv~Rekrp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~P 323 (717)
+..+..++ ..||++|+|.|++. ++||+|+++|||...+ |+.+.+++..+.+-. ++.+++|.+-
T Consensus 139 i~vi~~~~-----N~G~~~A~~~Gi~~----a~gd~I~~~DaD~~~~-~~~l~~l~~~l~~~~-~~~~dvV~Gs 201 (333)
T PTZ00260 139 IRLLSLLR-----NKGKGGAVRIGMLA----SRGKYILMVDADGATD-IDDFDKLEDIMLKIE-QNGLGIVFGS 201 (333)
T ss_pred EEEEEcCC-----CCChHHHHHHHHHH----ccCCEEEEEeCCCCCC-HHHHHHHHHHHHHhh-ccCCceEEee
Confidence 44454433 36899999999998 6899999999999996 999999988876410 1146666653
No 62
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=99.48 E-value=1e-12 Score=139.69 Aligned_cols=134 Identities=19% Similarity=0.196 Sum_probs=90.3
Q ss_pred CChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHH---hhccCCCCeEEEEeccceeccCCcchhhhhhHH
Q 005037 264 NFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCF---FIDEEKGHEVAFVQFPQNFDNVTKNELYSNSSR 340 (717)
Q Consensus 264 ~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~---f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~ 340 (717)
-++|.|.|.|++. +++|+|+++|+|+++. |+++.+++.+ +... .-+++-.|..+.+.+....+-....
T Consensus 74 f~~a~arN~g~~~----A~~d~l~flD~D~i~~-~~~i~~~~~~~~~l~~~----~~~~~~~p~~yl~~~~~~~~~~~~~ 144 (281)
T PF10111_consen 74 FSRAKARNIGAKY----ARGDYLIFLDADCIPS-PDFIEKLLNHVKKLDKN----PNAFLVYPCLYLSEEGSEKFYSQFK 144 (281)
T ss_pred cCHHHHHHHHHHH----cCCCEEEEEcCCeeeC-HHHHHHHHHHHHHHhcC----CCceEEEeeeeccchhhHHHhhcch
Confidence 3799999999998 6999999999999997 9999999993 3221 2345556665554332221111110
Q ss_pred -----HHHHHHHhh-hhccCCcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccccccC
Q 005037 341 -----IFNEVELQG-LDGYGCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYERNT 414 (717)
Q Consensus 341 -----~f~~~~~~g-~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~t 414 (717)
.+.+....+ .+.++.....|++.+++|+.+.+ +|||+|...
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~r~~f~~--------------iGGfDE~f~------------------- 191 (281)
T PF10111_consen 145 NLWDHEFLESFISGKNSLWEFIAFASSCFLINREDFLE--------------IGGFDERFR------------------- 191 (281)
T ss_pred hcchHHHHHHHhhccccccccccccceEEEEEHHHHHH--------------hCCCCcccc-------------------
Confidence 111111111 22223333467888899999998 999987531
Q ss_pred CcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCC
Q 005037 415 QWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKP 449 (717)
Q Consensus 415 ~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~ 449 (717)
|| -.||.+++.||...|.+..+++.
T Consensus 192 ------G~----G~ED~D~~~RL~~~~~~~~~~~~ 216 (281)
T PF10111_consen 192 ------GW----GYEDIDFGYRLKKAGYKFKRSPD 216 (281)
T ss_pred ------CC----CcchHHHHHHHHHcCCcEecChH
Confidence 33 26999999999999999888764
No 63
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=99.45 E-value=1.4e-12 Score=128.13 Aligned_cols=104 Identities=14% Similarity=0.209 Sum_probs=64.0
Q ss_pred EEEEeeccCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccC
Q 005037 250 LVYLAREKRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNV 329 (717)
Q Consensus 250 l~yv~Rekrp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~ 329 (717)
+.++..++ ..||++|+|.+++. +.+|+++++|+|..+. |++|.+++..+.+. .++ |-+.....+
T Consensus 57 i~~i~~~~-----n~G~~~a~n~g~~~----a~~d~i~~~D~D~~~~-~~~l~~l~~~~~~~---~~~--v~g~~~~~~- 120 (181)
T cd04187 57 VKVIRLSR-----NFGQQAALLAGLDH----ARGDAVITMDADLQDP-PELIPEMLAKWEEG---YDV--VYGVRKNRK- 120 (181)
T ss_pred EEEEEecC-----CCCcHHHHHHHHHh----cCCCEEEEEeCCCCCC-HHHHHHHHHHHhCC---CcE--EEEEecCCc-
Confidence 55555443 35799999999998 6899999999999996 99999999875332 233 322222122
Q ss_pred Ccchhhhhh-HHHHHHHHHhhhhccCCcccccccceEehhhhcc
Q 005037 330 TKNELYSNS-SRIFNEVELQGLDGYGCPLYTGSGCFHRREILCG 372 (717)
Q Consensus 330 ~~~d~~~~~-~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~ 372 (717)
. + ..... ...++. ......+..-+...|+..++||+++++
T Consensus 121 ~-~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~ 161 (181)
T cd04187 121 E-S-WLKRLTSKLFYR-LINKLSGVDIPDNGGDFRLMDRKVVDA 161 (181)
T ss_pred c-h-HHHHHHHHHHHH-HHHHHcCCCCCCCCCCEEEEcHHHHHH
Confidence 1 1 11111 112221 122222333344567778999999998
No 64
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=99.41 E-value=2.3e-12 Score=136.23 Aligned_cols=147 Identities=18% Similarity=0.154 Sum_probs=94.8
Q ss_pred eEEEEeeccCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceecc
Q 005037 249 TLVYLAREKRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDN 328 (717)
Q Consensus 249 ~l~yv~Rekrp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n 328 (717)
++.|+..++ ..|.|+|+|.|++.+- ..++|+|+++|.|.+++ |+++.+++..+..+ +.++++|+ |..+..
T Consensus 46 ~i~~i~~~~-----N~G~a~a~N~Gi~~a~-~~~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~--~~~~~~~~-~~~~~~ 115 (281)
T TIGR01556 46 KIALIHLGD-----NQGIAGAQNQGLDASF-RRGVQGVLLLDQDSRPG-NAFLAAQWKLLSAE--NGQACALG-PRFFDR 115 (281)
T ss_pred CeEEEECCC-----CcchHHHHHHHHHHHH-HCCCCEEEEECCCCCCC-HHHHHHHHHHHHhc--CCceEEEC-CeEEcC
Confidence 366776544 3689999999998731 12689999999999997 99999999988653 12677774 443322
Q ss_pred CCcchhhhh--hHHHHHHHH-Hhhhhc-cCCcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhh
Q 005037 329 VTKNELYSN--SSRIFNEVE-LQGLDG-YGCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKA 404 (717)
Q Consensus 329 ~~~~d~~~~--~~~~f~~~~-~~g~d~-~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~ 404 (717)
+.+..++. ......... ...... ....+..++|+++||+++++ +|+|++..
T Consensus 116 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~li~~~~~~~--------------iG~fde~~---------- 170 (281)
T TIGR01556 116 -GTSRRLPAIHLDGLLLRQISLDGLTTPQKTSFLISSGCLITREVYQR--------------LGMMDEEL---------- 170 (281)
T ss_pred -CCcccCCceeecccceeeecccccCCceeccEEEcCcceeeHHHHHH--------------hCCccHhh----------
Confidence 11111110 000000000 000011 11234568889999999998 88876532
Q ss_pred cccccccccCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCC
Q 005037 405 LASCTYERNTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPE 450 (717)
Q Consensus 405 v~~c~Ye~~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~ 450 (717)
|. =.||.+.++|+.++||++.+++..
T Consensus 171 -----------------fi---~~~D~e~~~R~~~~G~~i~~~~~~ 196 (281)
T TIGR01556 171 -----------------FI---DHVDTEWSLRAQNYGIPLYIDPDI 196 (281)
T ss_pred -----------------cc---cchHHHHHHHHHHCCCEEEEeCCE
Confidence 11 148999999999999999999853
No 65
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=99.34 E-value=2.7e-11 Score=130.38 Aligned_cols=123 Identities=19% Similarity=0.132 Sum_probs=88.5
Q ss_pred CCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCC
Q 005037 96 DKLPGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRS 175 (717)
Q Consensus 96 ~~~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~ 175 (717)
..-|.|+|+||+|| |+ ..+.++|.++.++.++....+|+|+||||+|.|.+.+.+. +++
T Consensus 28 ~~~~~vSVVIPayN---ee-~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~ia~~~--------------~~~--- 86 (306)
T PRK13915 28 KAGRTVSVVLPALN---EE-ETVGKVVDSIRPLLMEPLVDELIVIDSGSTDATAERAAAA--------------GAR--- 86 (306)
T ss_pred cCCCCEEEEEecCC---cH-HHHHHHHHHHHHHhccCCCcEEEEEeCCCccHHHHHHHHh--------------cch---
Confidence 35789999999999 44 5789999999987663224689999999999987543321 100
Q ss_pred chhhhhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEee
Q 005037 176 PAAYFINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAR 255 (717)
Q Consensus 176 p~~yf~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~R 255 (717)
+- + ....+.+
T Consensus 87 ----------------v~------------------------------~------------------------~~~~~~~ 96 (306)
T PRK13915 87 ----------------VV------------------------------S------------------------REEILPE 96 (306)
T ss_pred ----------------hh------------------------------c------------------------chhhhhc
Confidence 00 0 0000000
Q ss_pred ccCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCC-CCchHHHHHHHHHhh-ccCCCCeEEEEec
Q 005037 256 EKRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMY-SNNSQVVRDALCFFI-DEEKGHEVAFVQF 322 (717)
Q Consensus 256 ekrp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~-~~~p~~L~~~v~~f~-d~~~~~~vg~VQ~ 322 (717)
.+ ...||++|+|.+++. ++||+++++|||.. ++ |+++.+++..+. ++ ++++|.+
T Consensus 97 --~~--~n~Gkg~A~~~g~~~----a~gd~vv~lDaD~~~~~-p~~l~~l~~~l~~~~----~~~~V~g 152 (306)
T PRK13915 97 --LP--PRPGKGEALWRSLAA----TTGDIVVFVDADLINFD-PMFVPGLLGPLLTDP----GVHLVKA 152 (306)
T ss_pred --cc--cCCCHHHHHHHHHHh----cCCCEEEEEeCccccCC-HHHHHHHHHHHHhCC----CceEEEE
Confidence 01 136899999999998 68999999999997 65 999999998886 55 5777765
No 66
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=99.33 E-value=1.5e-11 Score=132.25 Aligned_cols=208 Identities=18% Similarity=0.188 Sum_probs=139.1
Q ss_pred CCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCch
Q 005037 98 LPGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPA 177 (717)
Q Consensus 98 ~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~ 177 (717)
.|.+.++|+|||+. +.+.+++.++.+++||.+ .++++|+|++|.|.+.+.+..
T Consensus 2 ~~~i~~iiv~yn~~----~~l~~~l~~l~~~~~~~~--~iv~vDn~s~d~~~~~~~~~~--------------------- 54 (305)
T COG1216 2 MPKISIIIVTYNRG----EDLVECLASLAAQTYPDD--VIVVVDNGSTDGSLEALKARF--------------------- 54 (305)
T ss_pred CcceEEEEEecCCH----HHHHHHHHHHhcCCCCCc--EEEEccCCCCCCCHHHHHhhc---------------------
Confidence 47899999999955 589999999999999976 455899999998764332210
Q ss_pred hhhhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeecc
Q 005037 178 AYFINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREK 257 (717)
Q Consensus 178 ~yf~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rek 257 (717)
.|++.++.-.+
T Consensus 55 ---------------------------------------------------------------------~~~v~~i~~~~ 65 (305)
T COG1216 55 ---------------------------------------------------------------------FPNVRLIENGE 65 (305)
T ss_pred ---------------------------------------------------------------------CCcEEEEEcCC
Confidence 23466776544
Q ss_pred CCCCCCCChHHHHHHHHHhcccCCCcc-EEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCc-chhh
Q 005037 258 RPWHFQNFKAGAMNALIRVSSKISNGQ-VILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTK-NELY 335 (717)
Q Consensus 258 rp~~~~~~KAGALN~al~~s~~~t~gd-~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~-~d~~ 335 (717)
| .|=||+.|.+++.+ ..+++ ++++++-|++++ |++|.+++..+.+. +.++.|+.....++... -+..
T Consensus 66 N-----lG~agg~n~g~~~a--~~~~~~~~l~LN~D~~~~-~~~l~~ll~~~~~~---~~~~~~~~~i~~~~~~~~~~~~ 134 (305)
T COG1216 66 N-----LGFAGGFNRGIKYA--LAKGDDYVLLLNPDTVVE-PDLLEELLKAAEED---PAAGVVGPLIRNYDESLYIDRR 134 (305)
T ss_pred C-----ccchhhhhHHHHHH--hcCCCcEEEEEcCCeeeC-hhHHHHHHHHHHhC---CCCeEeeeeEecCCCCcchhee
Confidence 3 56689999999874 13444 899999999996 99999999988754 25777765443332111 0111
Q ss_pred hhhHHHH---------HHHHH--hhhhccCCcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhh
Q 005037 336 SNSSRIF---------NEVEL--QGLDGYGCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKA 404 (717)
Q Consensus 336 ~~~~~~f---------~~~~~--~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~ 404 (717)
+.....+ ++... ...+... +.++|+++++||++++. +|+|++..
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~~~li~~~~~~~--------------vG~~de~~---------- 189 (305)
T COG1216 135 GGESDGLTGGWRASPLLEIAPDLSSYLEVV-ASLSGACLLIRREAFEK--------------VGGFDERF---------- 189 (305)
T ss_pred ccccccccccceecccccccccccchhhhh-hhcceeeeEEcHHHHHH--------------hCCCCccc----------
Confidence 1000000 00000 0000000 14689999999999998 88887632
Q ss_pred cccccccccCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCccccccC
Q 005037 405 LASCTYERNTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDAFLGVS 458 (717)
Q Consensus 405 v~~c~Ye~~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a~~g~a 458 (717)
| .-.||++.++|+..+||+++|++.. ..++-..
T Consensus 190 -----------------F---~y~eD~D~~~R~~~~G~~i~~~p~a-~i~H~~g 222 (305)
T COG1216 190 -----------------F---IYYEDVDLCLRARKAGYKIYYVPDA-IIYHKIG 222 (305)
T ss_pred -----------------c---eeehHHHHHHHHHHcCCeEEEeecc-EEEEecc
Confidence 1 2379999999999999999999864 3444333
No 67
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=99.30 E-value=3.1e-10 Score=123.20 Aligned_cols=43 Identities=14% Similarity=0.158 Sum_probs=38.8
Q ss_pred CCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhc
Q 005037 263 QNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFID 310 (717)
Q Consensus 263 ~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d 310 (717)
..||++|+|+|++. ++||+++++|||...+ |+.+.+++..+.+
T Consensus 75 n~G~~~A~~~G~~~----A~gd~vv~~DaD~q~~-p~~i~~l~~~~~~ 117 (325)
T PRK10714 75 NYGQHSAIMAGFSH----VTGDLIITLDADLQNP-PEEIPRLVAKADE 117 (325)
T ss_pred CCCHHHHHHHHHHh----CCCCEEEEECCCCCCC-HHHHHHHHHHHHh
Confidence 36899999999998 6899999999999996 9999999988764
No 68
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=99.26 E-value=1.4e-10 Score=107.40 Aligned_cols=155 Identities=24% Similarity=0.240 Sum_probs=113.0
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCchhhhhH
Q 005037 103 IFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSPAAYFIN 182 (717)
Q Consensus 103 V~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 182 (717)
|+||++| |+ ..+..|+.|++.++|+ ..+++|+||++++.+.+.+.+..+.
T Consensus 1 iii~~~~---~~-~~l~~~l~s~~~~~~~--~~~i~i~~~~~~~~~~~~~~~~~~~------------------------ 50 (156)
T cd00761 1 VIIPAYN---EE-PYLERCLESLLAQTYP--NFEVIVVDDGSTDGTLEILEEYAKK------------------------ 50 (156)
T ss_pred CEEeecC---cH-HHHHHHHHHHHhCCcc--ceEEEEEeCCCCccHHHHHHHHHhc------------------------
Confidence 5799999 64 6899999999999996 5689999999998765433322100
Q ss_pred HHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeeccCCCCC
Q 005037 183 RLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLAREKRPWHF 262 (717)
Q Consensus 183 ~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Rekrp~~~ 262 (717)
. +...++.+++
T Consensus 51 ----------------------------------------~------------------------~~~~~~~~~~----- 61 (156)
T cd00761 51 ----------------------------------------D------------------------PRVIRVINEE----- 61 (156)
T ss_pred ----------------------------------------C------------------------CCeEEEEecC-----
Confidence 0 0123333322
Q ss_pred CCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhhhhhHHHH
Q 005037 263 QNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELYSNSSRIF 342 (717)
Q Consensus 263 ~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f 342 (717)
+.+|++++|.+++. .++|+++++|+|.++. |+++...+..+... ++.++|+++
T Consensus 62 ~~g~~~~~~~~~~~----~~~d~v~~~d~D~~~~-~~~~~~~~~~~~~~---~~~~~v~~~------------------- 114 (156)
T cd00761 62 NQGLAAARNAGLKA----ARGEYILFLDADDLLL-PDWLERLVAELLAD---PEADAVGGP------------------- 114 (156)
T ss_pred CCChHHHHHHHHHH----hcCCEEEEECCCCccC-ccHHHHHHHHHhcC---CCceEEecc-------------------
Confidence 57899999999998 5899999999999996 99999875444432 257777765
Q ss_pred HHHHHhhhhccCCcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccccccCCcCccccc
Q 005037 343 NEVELQGLDGYGCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYERNTQWGKEMGL 422 (717)
Q Consensus 343 ~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~t~wG~~~G~ 422 (717)
+++++|++++.+ .|+++... ++
T Consensus 115 ------------------~~~~~~~~~~~~--------------~~~~~~~~--------------------------~~ 136 (156)
T cd00761 115 ------------------GNLLFRRELLEE--------------IGGFDEAL--------------------------LS 136 (156)
T ss_pred ------------------chheeeHHHHHH--------------hCCcchHh--------------------------cC
Confidence 677899999988 65543211 11
Q ss_pred CCCCCcchHHHHHHHHhcCCeEE
Q 005037 423 KYGCPAEDVVTGLSIQSRGWKSV 445 (717)
Q Consensus 423 ~~~svtED~~t~~rl~~~Gwrsv 445 (717)
-.||..+..+++..|++.+
T Consensus 137 ----~~ed~~~~~~~~~~g~~~~ 155 (156)
T cd00761 137 ----GEEDDDFLLRLLRGGKVAF 155 (156)
T ss_pred ----CcchHHHHHHHHhhccccc
Confidence 1799999999999998764
No 69
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=99.23 E-value=4.5e-10 Score=131.52 Aligned_cols=168 Identities=18% Similarity=0.141 Sum_probs=114.2
Q ss_pred CCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhh-ccCCCCeEEEEeccceeccCCcchhhhhhHHH
Q 005037 263 QNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFI-DEEKGHEVAFVQFPQNFDNVTKNELYSNSSRI 341 (717)
Q Consensus 263 ~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~-d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~ 341 (717)
-+.|--.+|.+.... +.+-++|+.+|+|+.+. |+++.+++.-|. || +||.+.+ +..|..... ....+..
T Consensus 423 w~~~r~~~y~~~~~L--~~~v~~il~vD~dT~~~-P~ai~~lv~~f~~dp----~VggaCG--~I~~~~~~w-~v~~Q~F 492 (862)
T KOG2571|consen 423 WNQHRWVMYTAFKAL--MPSVDYILVVDADTRLD-PDALYHLVKVFDEDP----QVGGACG--RILNKGGSW-VVAYQNF 492 (862)
T ss_pred HHHHHHHHHHHHHHh--cCcceEEEEecCCCccC-cHHHHHHHHHhccCc----ccceecc--ccccCCCce-EEeHHHH
Confidence 355666677666653 35667999999999996 999999999997 55 7999988 334432221 1111222
Q ss_pred HH---HHHHhhhhccCCcccc--cccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccccccCCc
Q 005037 342 FN---EVELQGLDGYGCPLYT--GSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYERNTQW 416 (717)
Q Consensus 342 f~---~~~~~g~d~~~~~~~~--Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~t~w 416 (717)
-| ...++..+..-|.+.| |.-++||-+||.+-.. +.| -|. ++-
T Consensus 493 EY~Ish~l~Ka~ESvFG~VsclPGcfs~yR~~aL~~~~~-----~~~---y~~------------------------~~~ 540 (862)
T KOG2571|consen 493 EYAISHNLQKATESVFGCVSCLPGCFSLYRASALMDQFV-----EYF---YGE------------------------KFS 540 (862)
T ss_pred HHHHHHHHHHhhhhhceeEEecCchhHHHHHHHHhcchH-----Hhh---hch------------------------hhc
Confidence 22 3455677776676655 4445699999987210 111 000 000
Q ss_pred CcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCccccccCCcCHHHHHHHHHHHhcc
Q 005037 417 GKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDAFLGVSPTTLLQLLVQHKRWSEG 475 (717)
Q Consensus 417 G~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a~~g~aP~tl~~~~~Qr~RWa~G 475 (717)
|..-|..+ +..||-.+..++..+||+..|+... .+ ...+|+++.+++.||+||..|
T Consensus 541 ~~~~~~~~-~~geDR~L~~~llskgy~l~Y~a~s-~a-~t~~Pe~~~efl~QrrRW~~s 596 (862)
T KOG2571|consen 541 GPRHGIQY-SLGEDRWLCTLLLSKGYRLKYVAAS-DA-ETEAPESFLEFLNQRRRWLNS 596 (862)
T ss_pred Cccccccc-ccchhHHHHHHHHhccceeeeeccc-cc-cccCcHhHHHHHHHhhhhccc
Confidence 11113333 3799999999999999999999854 34 799999999999999999999
No 70
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=98.93 E-value=7.6e-09 Score=106.34 Aligned_cols=44 Identities=11% Similarity=0.199 Sum_probs=39.4
Q ss_pred CCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhcc
Q 005037 263 QNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDE 311 (717)
Q Consensus 263 ~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~ 311 (717)
..+++.+.|.|+.. +.+|+|+++|+|..+. |+.+.++...+.++
T Consensus 56 ~~g~~~~~n~~~~~----a~~d~vl~lDaD~~~~-~~~~~~l~~~~~~~ 99 (229)
T cd02511 56 WDGFGAQRNFALEL----ATNDWVLSLDADERLT-PELADEILALLATD 99 (229)
T ss_pred CCChHHHHHHHHHh----CCCCEEEEEeCCcCcC-HHHHHHHHHHHhCC
Confidence 36789999999998 6899999999999997 99999999988765
No 71
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=98.91 E-value=9.8e-09 Score=98.02 Aligned_cols=48 Identities=23% Similarity=0.332 Sum_probs=42.9
Q ss_pred CCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHH
Q 005037 98 LPGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYA 151 (717)
Q Consensus 98 ~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~ 151 (717)
.|.++|+||||| |+ ..+.++|.|++++.|+. .+|+|+||||+|.|.+.
T Consensus 2 ~~~~siiip~~n---~~-~~l~~~l~s~~~q~~~~--~eiivvddgs~d~t~~~ 49 (291)
T COG0463 2 MPKVSVVIPTYN---EE-EYLPEALESLLNQTYKD--FEIIVVDDGSTDGTTEI 49 (291)
T ss_pred CccEEEEEeccc---hh-hhHHHHHHHHHhhhhcc--eEEEEEeCCCCCChHHH
Confidence 588999999999 54 68999999999999996 67999999999998653
No 72
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.68 E-value=2.5e-07 Score=98.64 Aligned_cols=228 Identities=23% Similarity=0.276 Sum_probs=150.0
Q ss_pred cCCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCC
Q 005037 95 EDKLPGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPR 174 (717)
Q Consensus 95 ~~~~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r 174 (717)
+..+|+|+|+-|--. -+| ...+-+++-...+|| |+|...+=+.+.|.-.++.+ + .-+|
T Consensus 81 ~~~LPgVSiikPl~G---~d~-nl~~Nlesffts~Y~--~~ElLfcv~s~eDpAi~vv~---~-------Ll~k------ 138 (431)
T KOG2547|consen 81 DPKLPGVSIIKPLKG---VDP-NLYHNLESFFTSQYH--KYELLFCVESSEDPAIEVVE---R-------LLKK------ 138 (431)
T ss_pred CCCCCCceEEeeccc---CCc-hhHHhHHHHHhhccC--ceEEEEEEccCCCcHHHHHH---H-------HHhh------
Confidence 347999999999987 332 566779999999999 88988776666663222111 0 0111
Q ss_pred CchhhhhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEe
Q 005037 175 SPAAYFINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLA 254 (717)
Q Consensus 175 ~p~~yf~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~ 254 (717)
||++ |. -+++.
T Consensus 139 -------------------------------------------------yp~V-------------dA-------klf~g 149 (431)
T KOG2547|consen 139 -------------------------------------------------YPNV-------------DA-------KLFFG 149 (431)
T ss_pred -------------------------------------------------CCCc-------------ce-------EEEEc
Confidence 1211 00 12233
Q ss_pred eccCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEE-eccceeccCCcch
Q 005037 255 REKRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFV-QFPQNFDNVTKNE 333 (717)
Q Consensus 255 Rekrp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~V-Q~Pq~f~n~~~~d 333 (717)
-++- | -+-|-.|+--|.+. ++.|+|++.|.|-.+. ||.+.++..-|+.++ ++|+| |+|-.+.- ...|
T Consensus 150 G~~v-g--~npKInN~mpgy~~----a~ydlvlisDsgI~m~-pdtildm~t~M~she---kmalvtq~py~~dr-~Gf~ 217 (431)
T KOG2547|consen 150 GEKV-G--LNPKINNMMPGYRA----AKYDLVLISDSGIFMK-PDTILDMATTMMSHE---KMALVTQTPYCKDR-QGFD 217 (431)
T ss_pred cccc-c--cChhhhccCHHHHH----hcCCEEEEecCCeeec-CchHHHHHHhhhccc---ceeeecCCceeecc-ccch
Confidence 3331 2 35688888888887 7899999999999997 999999999888764 89999 66654432 2211
Q ss_pred hhhhhHHHHHHHHHhhhhccCC-----cccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccc
Q 005037 334 LYSNSSRIFNEVELQGLDGYGC-----PLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASC 408 (717)
Q Consensus 334 ~~~~~~~~f~~~~~~g~d~~~~-----~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c 408 (717)
. ....++|...++ +--+.+ -..+|-.|++|+++|.+ -||+..
T Consensus 218 a--tle~~~fgTsh~-r~yl~~n~~~~~c~tgms~~mrK~~ld~--------------~ggi~~---------------- 264 (431)
T KOG2547|consen 218 A--TLEQVYFGTSHP-RIYLSGNVLGFNCSTGMSSMMRKEALDE--------------CGGISA---------------- 264 (431)
T ss_pred h--hhhheeeccCCc-eEEEccccccccccccHHHHHHHHHHHH--------------hccHHH----------------
Confidence 1 111233332221 111111 12356668999999998 565432
Q ss_pred cccccCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCccccccCCcCHHHHHHHHHHHhc
Q 005037 409 TYERNTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDAFLGVSPTTLLQLLVQHKRWSE 474 (717)
Q Consensus 409 ~Ye~~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a~~g~aP~tl~~~~~Qr~RWa~ 474 (717)
.|| .+.||+..+-.+..+||++.+... ++-...+-.+...+..|-.||..
T Consensus 265 -----------f~~---yLaedyFaaksllSRG~ksaist~--palQnSas~~mssf~~Ri~rwvk 314 (431)
T KOG2547|consen 265 -----------FGG---YLAEDYFAAKSLLSRGWKSAISTH--PALQNSASVTMSSFLDRIIRWVK 314 (431)
T ss_pred -----------HHH---HHHHHHHHHHHHHhhhhhhhhccc--chhhhhhhhHHHHHHHHHHHhhh
Confidence 122 589999999999999999999874 34345666788888888888874
No 73
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=98.64 E-value=1.1e-06 Score=85.73 Aligned_cols=105 Identities=16% Similarity=0.185 Sum_probs=65.0
Q ss_pred eEEEEeeccCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceecc
Q 005037 249 TLVYLAREKRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDN 328 (717)
Q Consensus 249 ~l~yv~Rekrp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n 328 (717)
++....|.+. -|=.-|--+++.+ ++|||+++.|||---+ |.++-+.+....+- +..+|-+- +|..
T Consensus 64 ~i~l~pR~~k-----lGLgtAy~hgl~~----a~g~fiviMDaDlsHh-Pk~ipe~i~lq~~~----~~div~GT-RYa~ 128 (238)
T KOG2978|consen 64 NILLKPRTKK-----LGLGTAYIHGLKH----ATGDFIVIMDADLSHH-PKFIPEFIRLQKEG----NYDIVLGT-RYAG 128 (238)
T ss_pred cEEEEeccCc-----ccchHHHHhhhhh----ccCCeEEEEeCccCCC-chhHHHHHHHhhcc----Ccceeeee-eEcC
Confidence 4666677653 4566788889988 7999999999998876 99998888766554 56777653 3322
Q ss_pred CCcchhhhhhHHHHHHHHHhh-------hhccCCcccccccceEehhhhcc
Q 005037 329 VTKNELYSNSSRIFNEVELQG-------LDGYGCPLYTGSGCFHRREILCG 372 (717)
Q Consensus 329 ~~~~d~~~~~~~~f~~~~~~g-------~d~~~~~~~~Gtg~~~RR~aL~~ 372 (717)
.. ..++ ..+.-.++-+| +-+.+..-.+|+.-++|++.|+.
T Consensus 129 ~g--gV~g--W~mkRk~IS~gAn~la~~ll~~~~sdltGsFrLykk~vl~~ 175 (238)
T KOG2978|consen 129 GG--GVYG--WDMKRKIISRGANFLARILLNPGVSDLTGSFRLYKKEVLEK 175 (238)
T ss_pred CC--ceec--chhhHHHHhhhhHHHHHHhccCCCccCcceeeeehHHHHHh
Confidence 11 1111 00111111111 11223344678888899998875
No 74
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=98.28 E-value=3.6e-06 Score=87.27 Aligned_cols=114 Identities=20% Similarity=0.168 Sum_probs=80.8
Q ss_pred ceEEEEecCCCCCCChHHHHHHHHHHHcCCCCC---CCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCc
Q 005037 100 GVDIFVCTADPKIEPPMMVINTVLSVMAYDYPT---DKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSP 176 (717)
Q Consensus 100 ~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~---~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p 176 (717)
..+|+||+|||++-=|.++..|+.++.. .|-. -+.+|+|+|||+.|.|.+.-. .||+|+|.+
T Consensus 68 ~lsVIVpaynE~~ri~~mldeav~~le~-ry~~~~~F~~eiiVvddgs~d~T~~~a~----------k~s~K~~~d---- 132 (323)
T KOG2977|consen 68 YLSVIVPAYNEEGRIGAMLDEAVDYLEK-RYLSDKSFTYEIIVVDDGSTDSTVEVAL----------KFSRKLGDD---- 132 (323)
T ss_pred eeEEEEecCCcccchHHHHHHHHHHHHH-HhccCCCCceeEEEeCCCCchhHHHHHH----------HHHHHcCcc----
Confidence 6899999999887667777788776643 3433 478999999999999875322 267776521
Q ss_pred hhhhhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEeec
Q 005037 177 AAYFINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLARE 256 (717)
Q Consensus 177 ~~yf~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~Re 256 (717)
++..+.-.
T Consensus 133 ------------------------------------------------------------------------~irV~~l~ 140 (323)
T KOG2977|consen 133 ------------------------------------------------------------------------NIRVIKLK 140 (323)
T ss_pred ------------------------------------------------------------------------eEEEeehh
Confidence 13333332
Q ss_pred cCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCC--CCCchHHHHHHHHHhh
Q 005037 257 KRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDM--YSNNSQVVRDALCFFI 309 (717)
Q Consensus 257 krp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~--~~~~p~~L~~~v~~f~ 309 (717)
+ +.+|.||...++-+ +.|+++++.|||- -..|-+.|.+++.-..
T Consensus 141 ~-----nrgKGgAvR~g~l~----~rG~~ilfadAdGaTkf~d~ekLe~al~~~~ 186 (323)
T KOG2977|consen 141 K-----NRGKGGAVRKGMLS----SRGQKILFADADGATKFADLEKLEKALNDKA 186 (323)
T ss_pred c-----cCCCCcceehhhHh----ccCceEEEEcCCCCccCCCHHHHHHHHHhhc
Confidence 2 36899999988887 6899999999995 3334667777765433
No 75
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=98.10 E-value=4.4e-05 Score=82.99 Aligned_cols=45 Identities=16% Similarity=0.335 Sum_probs=37.6
Q ss_pred eEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhH
Q 005037 101 VDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTF 149 (717)
Q Consensus 101 VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~ 149 (717)
+-|+|.||| -| +.+.+||.|++++.+..+..+|||++||+++.|.
T Consensus 2 ~PVlv~ayN---Rp-~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~ 46 (334)
T cd02514 2 IPVLVIACN---RP-DYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVA 46 (334)
T ss_pred cCEEEEecC---CH-HHHHHHHHHHHhccccCCCceEEEEeCCCchHHH
Confidence 458999999 65 8999999999998744567889999999987543
No 76
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.64 E-value=0.0001 Score=79.29 Aligned_cols=50 Identities=24% Similarity=0.280 Sum_probs=41.4
Q ss_pred ccCCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCCh
Q 005037 94 YEDKLPGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSD 146 (717)
Q Consensus 94 ~~~~~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd 146 (717)
+++++|+++|+|--+| |.-..+++||.|++.-.=|+---+|+++||=|..
T Consensus 150 Ype~Lpt~SVviVFHN---EGws~LmRTVHSVi~RsP~~~l~eivlvDDfSdK 199 (603)
T KOG3737|consen 150 YPENLPTSSVVIVFHN---EGWSTLMRTVHSVIKRSPRKYLAEIVLVDDFSDK 199 (603)
T ss_pred CcccCCcceEEEEEec---CccHHHHHHHHHHHhcCcHHhhheEEEeccCCcc
Confidence 4678999999999999 7778999999999987755445578888887764
No 77
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.27 E-value=0.0002 Score=82.36 Aligned_cols=219 Identities=20% Similarity=0.211 Sum_probs=134.1
Q ss_pred cCCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCC
Q 005037 95 EDKLPGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPR 174 (717)
Q Consensus 95 ~~~~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r 174 (717)
.+.+|+++|+|+-+| |...++.+||-|+....=|.---+|+++||++...-.
T Consensus 138 ~~~Lp~~Svii~f~n---E~~s~llRtv~Svi~rtp~~lLkEIiLVdD~S~~~~l------------------------- 189 (578)
T KOG3736|consen 138 SDKLPTTSVIIIFHN---EAWSTLLRTVHSVINRTPPYLLKEIILVDDFSDRDHL------------------------- 189 (578)
T ss_pred ccccCCCceEEEEec---CCCcchhheEEeehccCChhHeEEEEEeecCcchhhh-------------------------
Confidence 456999999999999 7778999999999998855446689999999876321
Q ss_pred CchhhhhHHHHHHHHHHHHHhhhcccchHHHHHhhcCcccccCCCCCCCCccceeeeecCCCCCccccccCCCCeEEEEe
Q 005037 175 SPAAYFINRLYEEMENRIQTATKLGRITEEIRMKHKGFSQWDSYSSPLDHDTILQILIDGRDPNAVDNERCALPTLVYLA 254 (717)
Q Consensus 175 ~p~~yf~~~~ye~~~~ri~~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~h~~iv~v~~~~~~~~~~d~~g~~~P~l~yv~ 254 (717)
+..+++-++ +++.+.++.
T Consensus 190 --------------~~~Ld~y~k------------------------------------------------~~~~v~i~r 207 (578)
T KOG3736|consen 190 --------------KDKLEEYVK------------------------------------------------RFSKVRILR 207 (578)
T ss_pred --------------hhhhHHHHh------------------------------------------------hhcceeEEe
Confidence 111111000 011144455
Q ss_pred eccCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcch-
Q 005037 255 REKRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNE- 333 (717)
Q Consensus 255 Rekrp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d- 333 (717)
.++| .|+-.|.+.+.+. +.||+++++||-+-++ ..+|.-++.--.... -..| .|- ...++.+.
T Consensus 208 ~~~R-----~GLIrARl~GA~~----A~geVL~FLDsHcE~n-~gWLePLL~~I~~~r----~tvv-~Pv-ID~Id~~tf 271 (578)
T KOG3736|consen 208 TKKR-----EGLIRARLLGASM----ATGEVLTFLDSHCEVN-VGWLEPLLARIAEDR----KTVV-CPV-IDVIDDNTF 271 (578)
T ss_pred ecch-----hhhHHHHhhhhhh----hhchheeeeecceeEe-cCcchHHHHHhhhcC----ceee-cce-EEeecCcCc
Confidence 5554 6788899988887 7999999999999997 999998886554321 1222 221 11121110
Q ss_pred hhhh---hHH------HHHH--------HHHhh--hhccCCcccccccceEehhhhccCCCCchhhHhhhccCCCccchh
Q 005037 334 LYSN---SSR------IFNE--------VELQG--LDGYGCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEES 394 (717)
Q Consensus 334 ~~~~---~~~------~f~~--------~~~~g--~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~ 394 (717)
.|.. ..+ ..|. ...+. .+-+..|...|.-+++.|+-+.+ +|++++..
T Consensus 272 ~y~~~~~~~rGgFdW~l~f~w~~lP~~~~~~~~~~t~PirsPtMaGglFAI~r~yF~e--------------iG~yD~gM 337 (578)
T KOG3736|consen 272 EYEKQSELMRGGFDWELTFKWERLPLPEEKRRELPTDPIRSPTMAGGLFAIDRKYFGE--------------LGSYDEGM 337 (578)
T ss_pred eecccCccceeeeecceeEEeccCCccHhhcccCCCCCcCCcccCCceEEeeHHHHhh--------------ccCccccc
Confidence 0100 001 1111 01111 13345677889999999999988 77665422
Q ss_pred hhhHHHhhhhcccccccccCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCc--cccccCCcCH
Q 005037 395 LLDLEETSKALASCTYERNTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERD--AFLGVSPTTL 462 (717)
Q Consensus 395 ~~~~~~~~~~v~~c~Ye~~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~--a~~g~aP~tl 462 (717)
..|| .|-+++|+|+=.-|-+..-+|-.+. .|....|-+.
T Consensus 338 -------------------diwG----------GENlElSfrvWqCGG~lei~PCSrVGHifRk~~pY~~ 378 (578)
T KOG3736|consen 338 -------------------DIWG----------GENLELSFRVWQCGGRLEIVPCSRVGHIFRKRKPYTF 378 (578)
T ss_pred -------------------cccC----------hhhceeeEEEeccCCeEEecCccceeeeeecCCCccC
Confidence 1344 3778888888777777666553322 2233455554
No 78
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.92 E-value=0.0032 Score=68.34 Aligned_cols=51 Identities=24% Similarity=0.270 Sum_probs=43.8
Q ss_pred cCCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhh
Q 005037 95 EDKLPGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLT 148 (717)
Q Consensus 95 ~~~~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T 148 (717)
..++|.-+|+|+-+| |....+-+||.|++...=++=-.+|+++||+|.|.+
T Consensus 120 ~~dlp~TsviITfHN---EARS~LLRTv~SvlnrsP~~li~EiILVDD~S~Dpe 170 (559)
T KOG3738|consen 120 KVDLPPTSVIITFHN---EARSTLLRTVVSVLNRSPEHLIHEIILVDDFSQDPE 170 (559)
T ss_pred ecCCCCceEEEEecc---HHHHHHHHHHHHHHcCChHHhhheeEEecCCCCChH
Confidence 357999999999999 666899999999999885444678999999999864
No 79
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=95.55 E-value=0.077 Score=46.77 Aligned_cols=35 Identities=26% Similarity=0.235 Sum_probs=28.4
Q ss_pred CChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHH
Q 005037 113 EPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYAL 152 (717)
Q Consensus 113 Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l 152 (717)
|. ..+...|..-+++.+- ++||.||||+|.|.+.|
T Consensus 3 e~-~~L~~wl~~~~~lG~d----~i~i~d~~s~D~t~~~l 37 (97)
T PF13704_consen 3 EA-DYLPEWLAHHLALGVD----HIYIYDDGSTDGTREIL 37 (97)
T ss_pred hH-HHHHHHHHHHHHcCCC----EEEEEECCCCccHHHHH
Confidence 54 5889999999888764 58999999999986543
No 80
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=94.62 E-value=0.13 Score=52.98 Aligned_cols=48 Identities=19% Similarity=0.304 Sum_probs=38.3
Q ss_pred ChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHh-hccCCCCeEEEE
Q 005037 265 FKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFF-IDEEKGHEVAFV 320 (717)
Q Consensus 265 ~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f-~d~~~~~~vg~V 320 (717)
.-+.+.|.|++. ++++|++++.-|..+.+++++.+++..| .|| ++|.+
T Consensus 41 s~~~~yN~a~~~----a~~~ylvflHqDv~i~~~~~l~~il~~~~~~~----~~G~i 89 (217)
T PF13712_consen 41 SMAAAYNEAMEK----AKAKYLVFLHQDVFIINENWLEDILEIFEEDP----NIGMI 89 (217)
T ss_dssp -TTTHHHHHGGG------SSEEEEEETTEE-SSHHHHHHHHHHHHH-T----TEEEE
T ss_pred CHHHHHHHHHHh----CCCCEEEEEeCCeEEcchhHHHHHHHHHhhCC----CccEE
Confidence 456799999998 7999999999999998899999999999 676 56665
No 81
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=94.48 E-value=0.25 Score=50.74 Aligned_cols=144 Identities=15% Similarity=0.097 Sum_probs=84.4
Q ss_pred CCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhhhhhHHHH
Q 005037 263 QNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELYSNSSRIF 342 (717)
Q Consensus 263 ~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f 342 (717)
.-.||-.||.|...+....+.+++++-|.|.+|.| +.+.. ++-+.|..+.-.- +.+. ...-
T Consensus 47 ~FNR~~llNvG~~~a~k~~~~dc~i~hDVDllP~~-~~~~y--------------~~~~~p~H~s~~~--~~~~--~~lp 107 (219)
T cd00899 47 RFNRAKLLNVGFLEALKDGDWDCFIFHDVDLLPEN-DRNLY--------------GCEEGPRHLSVPL--DKFH--YKLP 107 (219)
T ss_pred cchhhhhhhHHHHHHhhcCCccEEEEecccccccC-ccccc--------------cCCCCCeEEEEee--cccc--cccC
Confidence 35689999998776432245799999999999984 43321 1112232221110 0000 0001
Q ss_pred HHHHHhhhhccCCcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccccccCCcCccccc
Q 005037 343 NEVELQGLDGYGCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYERNTQWGKEMGL 422 (717)
Q Consensus 343 ~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~t~wG~~~G~ 422 (717)
| .-+.|.+..++|+.+.. ++||++.. | ||
T Consensus 108 y------------~~~~Gg~~~~~k~~f~~--------------VNGf~n~f---------------------~----GW 136 (219)
T cd00899 108 Y------------KTYFGGVLALTREQFRK--------------VNGFSNAY---------------------W----GW 136 (219)
T ss_pred c------------ccccccceeeEHHHHHH--------------hCCcCCcC---------------------c----cC
Confidence 1 12466688999999988 88887532 2 34
Q ss_pred CCCCCcchHHHHHHHHhcCCeEEEeCCCCc----cc------cccCCcCHHHHHHHHHHHhcchHHHH
Q 005037 423 KYGCPAEDVVTGLSIQSRGWKSVYSKPERD----AF------LGVSPTTLLQLLVQHKRWSEGNFQIF 480 (717)
Q Consensus 423 ~~~svtED~~t~~rl~~~Gwrsvy~~~~~~----a~------~g~aP~tl~~~~~Qr~RWa~G~lqil 480 (717)
- .||-+++.||..+|.+......... .. ....|.-+.....++.||+..++.-+
T Consensus 137 G----gEDdd~~~Rl~~~g~~~~r~~~~~~~~~hL~H~~~~r~~~N~~r~~~l~~~~~~~~~dGLnsl 200 (219)
T cd00899 137 G----GEDDDLYNRIKAAGLKITRPSGDTGRYKMIRHIHDKRNRDNPNRFALLQNSRERDHSDGLNSL 200 (219)
T ss_pred C----cchHHHHHHHHHCCCeEEeccCcccceeeeecCCCcccccCHHHHHHHHhhCeEeccCCccce
Confidence 1 5999999999999998766553211 00 12233444555666777776666443
No 82
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=93.93 E-value=1.2 Score=46.64 Aligned_cols=82 Identities=16% Similarity=0.158 Sum_probs=46.3
Q ss_pred CCeEEEEeeccCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeE-EEEeccce
Q 005037 247 LPTLVYLAREKRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEV-AFVQFPQN 325 (717)
Q Consensus 247 ~P~l~yv~Rekrp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~v-g~VQ~Pq~ 325 (717)
+|++.|++-...... -.-+---|+|...|-...++++++++|+|++.. .|-..+.+..-.--+...++ |..--|..
T Consensus 61 ~~~~~yl~~~s~~~F--~s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S-~dnF~k~l~~~~ikk~~tnI~a~~vlPV~ 137 (346)
T COG4092 61 MPRVLYLDFGSPEPF--ASETICANNGADYSHEKCESNLVLFLDVDCFGS-SDNFAKMLSIATIKKMRTNIDAPLVLPVY 137 (346)
T ss_pred ccceEEEecCCCccc--cchhhhhhccchhhhccccccEEEEEecccccc-HHHHHHHHHHHHHHHHHhccCcceeeeee
Confidence 567888875332111 112344566666554445789999999999997 55555555322211111234 55556777
Q ss_pred eccCCc
Q 005037 326 FDNVTK 331 (717)
Q Consensus 326 f~n~~~ 331 (717)
+-|...
T Consensus 138 ~LNk~~ 143 (346)
T COG4092 138 HLNKAD 143 (346)
T ss_pred ecchhh
Confidence 766543
No 83
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=93.35 E-value=1.3 Score=48.28 Aligned_cols=106 Identities=13% Similarity=0.163 Sum_probs=61.5
Q ss_pred CCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceecc-----CCc---chh
Q 005037 263 QNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDN-----VTK---NEL 334 (717)
Q Consensus 263 ~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n-----~~~---~d~ 334 (717)
++||+-+|=-++-.+. ....+||-++|||.++ |.++.+-+.-|.- ..+.-++|...-- .++ +..
T Consensus 142 R~GKgEGMiiG~lLAk-~~g~~YVGFiDADNyi--PGaV~EYvk~yAA-----Gf~ma~spytMVRi~W~~KPKv~~~~l 213 (393)
T PRK14503 142 RSGKGEGMIIGLLLAK-ALGARYVGFVDADNYI--PGAVNEYVKIYAA-----GFLMAESPYTMVRIHWRYKPKVTEDRL 213 (393)
T ss_pred ecCcchHHHHHHHHHH-HhCCCeEeEeecccCC--CchHHHHHHHHHh-----hhcccCCCCceEEEEecCCCceecCeE
Confidence 5789988887665432 2578999999999998 6888887765542 1233344422111 111 111
Q ss_pred ----hhhhHH---HHHHHHHhhhhccCCccc-cccc--ceEehhhhccCCCC
Q 005037 335 ----YSNSSR---IFNEVELQGLDGYGCPLY-TGSG--CFHRREILCGSKYN 376 (717)
Q Consensus 335 ----~~~~~~---~f~~~~~~g~d~~~~~~~-~Gtg--~~~RR~aL~~~~~~ 376 (717)
.|.-.+ .+.....+...|...++. +|.+ .+.+|+.++..+++
T Consensus 214 yF~k~GRvSel~nr~LN~l~~~~~gf~t~li~TGNAGEhAmt~~La~~l~f~ 265 (393)
T PRK14503 214 YFRKWGRVSEITNRYLNQLISEYTGFETDIIKTGNAGEHAMTMKLAEIMPFS 265 (393)
T ss_pred EEecCcchhHHHHHHHHHHHhhhccccccceecCCchhhHhhHHHHHhCCCC
Confidence 111111 133444566666666653 4544 46899988886554
No 84
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=93.35 E-value=0.45 Score=50.39 Aligned_cols=56 Identities=20% Similarity=0.186 Sum_probs=42.1
Q ss_pred CCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCC--hhhHHHHHHh
Q 005037 96 DKLPGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASS--DLTFYALMEA 155 (717)
Q Consensus 96 ~~~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~s--d~T~~~l~ea 155 (717)
.+-|+|=|+.|-.|-+ ..+..-...+..++||++++++=.+-.-++ |.|.+.|.++
T Consensus 22 ~~~e~VLILtplrna~----~~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l~~~ 79 (269)
T PF03452_consen 22 RNKESVLILTPLRNAA----SFLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKILEAA 79 (269)
T ss_pred ccCCeEEEEEecCCch----HHHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHHHHH
Confidence 4578999999999943 478999999999999999998844433344 6666655543
No 85
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=93.10 E-value=2.6 Score=50.91 Aligned_cols=194 Identities=16% Similarity=0.160 Sum_probs=110.6
Q ss_pred eccCCCCC--CCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHH------HHhhccCC-------------
Q 005037 255 REKRPWHF--QNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDAL------CFFIDEEK------------- 313 (717)
Q Consensus 255 Rekrp~~~--~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v------~~f~d~~~------------- 313 (717)
|-|-||.| ..||.-|.|+|+=- +.||++-.+|+.+ .+.|++++ .-|.+...
T Consensus 263 ri~LpG~pilGeGK~eNQNhaiiF----~rGe~lQ~IDmNQ----DnYleE~lK~rnlL~Ef~~~~~~~~~~~~~~~~~~ 334 (817)
T PF02364_consen 263 RIKLPGNPILGEGKPENQNHAIIF----TRGEYLQTIDMNQ----DNYLEEALKMRNLLEEFEEMHGDSSSPYIPGIEEE 334 (817)
T ss_pred EEECCCCCcCCCCCccccceeEEE----Eccccccccccch----hhhHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccc
Confidence 33446555 37899999999976 7999999999852 34455554 34543211
Q ss_pred -CCeEEEEeccceeccCCc---chhhhhhHHHHHHHHHhhhhccCCcccccccceEehhhhccCCCCchhhHhhhccCCC
Q 005037 314 -GHEVAFVQFPQNFDNVTK---NELYSNSSRIFNEVELQGLDGYGCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDS 389 (717)
Q Consensus 314 -~~~vg~VQ~Pq~f~n~~~---~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg 389 (717)
.+.++.|.++......+- .|..+.+...|--..++-+...++-+.-|.==++.|--... -||
T Consensus 335 ~~~~~aIlG~RE~IFs~~vg~L~~~aa~qE~~F~Tl~qR~la~p~~rlHYGHPD~~n~~f~~T--------------RGG 400 (817)
T PF02364_consen 335 GKRPVAILGFREHIFSENVGSLGDFAAGQEQSFGTLFQRTLANPLVRLHYGHPDVFNRIFMTT--------------RGG 400 (817)
T ss_pred CCCCceEecccceEecCCcchHHHHhhhhhHHHHHHHHHHHhcchhhccCCCchhhhhhheec--------------cCc
Confidence 356777777665443221 13333333444444444444333333333333333322222 244
Q ss_pred ccchhhhhHHHhhhhcccccccccCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCccccccCC-cCHHHHHHH
Q 005037 390 KGEESLLDLEETSKALASCTYERNTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDAFLGVSP-TTLLQLLVQ 468 (717)
Q Consensus 390 ~~~~~~~~~~~~~~~v~~c~Ye~~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a~~g~aP-~tl~~~~~Q 468 (717)
..+.+ -|. +++||+..|+....||-++.+|.- ..+|-.- -.+.+-..=
T Consensus 401 vSKAs-------------------------k~l---hLsEDIfaG~n~~lRGG~i~h~ey---~qcGKGRD~Gf~~I~~F 449 (817)
T PF02364_consen 401 VSKAS-------------------------KGL---HLSEDIFAGMNATLRGGRIKHCEY---IQCGKGRDVGFNSILNF 449 (817)
T ss_pred cchHh-------------------------hcc---cccHHHHHHHHHHhcCCceeehhh---hhcccccccCchhhhhh
Confidence 33211 022 689999999999999999999862 2234332 234444455
Q ss_pred HHHHhcchHHHHHhhhcccccccCCCchhHHHHHh
Q 005037 469 HKRWSEGNFQIFISKYCPAWHAHGKISLGFRLGYC 503 (717)
Q Consensus 469 r~RWa~G~lqil~~~~~pl~~~~~~l~~~qrl~y~ 503 (717)
-.+-+.|+-|.++||.--- .| .+|.+-+-+++.
T Consensus 450 ~~KI~~G~GEQ~LSRe~yr-Lg-~~ld~~R~LSfy 482 (817)
T PF02364_consen 450 ETKIASGMGEQMLSREYYR-LG-TRLDFFRFLSFY 482 (817)
T ss_pred HhHhcCCccchhhhHHHHH-hh-ccCCHHHHHHHH
Confidence 5678999988888864222 23 457766656543
No 86
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=92.09 E-value=1 Score=50.79 Aligned_cols=49 Identities=22% Similarity=0.454 Sum_probs=31.3
Q ss_pred CCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCC-CCCeEEEEEeCCCChhhH
Q 005037 96 DKLPGVDIFVCTADPKIEPPMMVINTVLSVMAYDYP-TDKLSVYLSDDASSDLTF 149 (717)
Q Consensus 96 ~~~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP-~~kl~v~V~DDg~sd~T~ 149 (717)
...|.+-|+|-+|| -| ..+.+||.++++.. | +++..|+|+.||+.+.|.
T Consensus 90 ~~~~~~pVlV~AcN---Rp-~yl~r~L~sLl~~r-p~~~~fpIiVSQDg~~~~~~ 139 (434)
T PF03071_consen 90 NKEPVIPVLVFACN---RP-DYLRRTLDSLLKYR-PSAEKFPIIVSQDGDDEEVA 139 (434)
T ss_dssp -------EEEEESS----T-T-HHHHHHHHHHH--S-TTTS-EEEEE-TT-HHHH
T ss_pred cCCCcceEEEEecC---Cc-HHHHHHHHHHHHcC-CCCCCccEEEEecCCcHHHH
Confidence 34678889999999 66 68999999999988 5 468889999999988664
No 87
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=91.38 E-value=0.89 Score=49.33 Aligned_cols=106 Identities=13% Similarity=0.144 Sum_probs=60.3
Q ss_pred CCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceec-----cCCc---chh
Q 005037 263 QNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFD-----NVTK---NEL 334 (717)
Q Consensus 263 ~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~-----n~~~---~d~ 334 (717)
++||+-+|=-++-.+. ....+||-++|||.++ |.++.+-+.-|.- ....-|+|...- ..++ +..
T Consensus 141 R~GKgEGMiiG~lLAk-~~g~~YVGFiDaDNyi--PGaV~EYvk~yAa-----Gf~ma~spy~MVRi~W~~KPKv~~~~l 212 (381)
T TIGR02460 141 RSGKGEGMLLGLLLAK-AIGAEYVGFVDADNYF--PGAVNEYVKIYAA-----GFLMATSPYSMVRIHWRYKPKLTKGTL 212 (381)
T ss_pred ecCcchHHHHHHHHHH-HhCCceEeEeecccCC--CchHHHHHHHHHh-----hhcccCCCCeeEEEEecCCCceecCeE
Confidence 5789988887665432 2578999999999998 6888887765542 122233332111 1011 111
Q ss_pred ----hhhhHH---HHHHHHHhhhhccCCccc-cccc--ceEehhhhccCCCC
Q 005037 335 ----YSNSSR---IFNEVELQGLDGYGCPLY-TGSG--CFHRREILCGSKYN 376 (717)
Q Consensus 335 ----~~~~~~---~f~~~~~~g~d~~~~~~~-~Gtg--~~~RR~aL~~~~~~ 376 (717)
.|.-.+ .+.....+...|...++. +|.+ .+.||+.++..+++
T Consensus 213 yF~~~GRVSElvnr~LN~l~~~~~gfet~ii~TGnAGEhAmt~~La~~l~f~ 264 (381)
T TIGR02460 213 YFRKWGRVSEITNHYLNLLISEHTGFETDIIKTGNAGEHALTMKLAEILPFS 264 (381)
T ss_pred EEcCCCchhHHHHHHHHHHHHhhccccCcceecccchhhhhhHHHHhhCCCC
Confidence 111111 133444556666666643 4433 46899988886654
No 88
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.
Probab=88.44 E-value=1.7 Score=47.55 Aligned_cols=43 Identities=21% Similarity=0.156 Sum_probs=29.7
Q ss_pred CCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHh
Q 005037 263 QNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFF 308 (717)
Q Consensus 263 ~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f 308 (717)
++||+-.|=-++-.+. ....+||-++|||.+. |.++.+-+.-|
T Consensus 141 R~GKgEGMiiGillAk-~~g~~YVGFvDADNyi--PGaV~EYvk~y 183 (381)
T PF09488_consen 141 RNGKGEGMIIGILLAK-APGKRYVGFVDADNYI--PGAVNEYVKDY 183 (381)
T ss_dssp -SSHHHHHHHHHHHHH-HTT-SEEEE--TTBS---HHHHHHHHHHH
T ss_pred ecCchHHHHHHHHHHH-hcCCceEeEeeccCCC--cchHHHHHHHH
Confidence 5789999987765532 2677999999999997 78888877544
No 89
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=87.90 E-value=0.62 Score=40.04 Aligned_cols=51 Identities=24% Similarity=0.106 Sum_probs=33.6
Q ss_pred cccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccccccCCcCcccccCCCCCcchHHHHH
Q 005037 356 PLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYERNTQWGKEMGLKYGCPAEDVVTGL 435 (717)
Q Consensus 356 ~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~t~wG~~~G~~~~svtED~~t~~ 435 (717)
+.++|..+.++|+.+.+ +|||++.. . || | -||.++..
T Consensus 17 ~~~~Gg~~~~~~~~f~~--------------vnGfde~f-------------------~------gW--G--~ED~Dl~~ 53 (78)
T PF02709_consen 17 PNFFGGVFAISREDFEK--------------VNGFDERF-------------------W------GW--G--GEDDDLYN 53 (78)
T ss_dssp TT---SEEEEEHHHHHH--------------TTSS-SS--------------------T------SC--S--SHHHHHHH
T ss_pred CCeeEEEEEEeHHHHHH--------------cCCCCccc-------------------c------cc--C--ccHHHHHH
Confidence 45678889999999998 99988643 1 33 1 49999999
Q ss_pred HHHhcCCeEEEeCC
Q 005037 436 SIQSRGWKSVYSKP 449 (717)
Q Consensus 436 rl~~~Gwrsvy~~~ 449 (717)
|+..+|.+....+.
T Consensus 54 Rl~~~g~~~~~~~~ 67 (78)
T PF02709_consen 54 RLWKAGLKIVRVPG 67 (78)
T ss_dssp HHHHTT---B-SST
T ss_pred HHHHcCCeEEecCC
Confidence 99999999877654
No 90
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=85.86 E-value=3.2 Score=49.44 Aligned_cols=44 Identities=23% Similarity=0.151 Sum_probs=34.2
Q ss_pred CCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhh
Q 005037 263 QNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFI 309 (717)
Q Consensus 263 ~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~ 309 (717)
+.||+-+|=-++-.+. ....+||-++|||.++ |.++.+-+..|.
T Consensus 146 r~gk~egm~~g~~la~-~~g~~yvgfidadny~--pg~v~ey~~~ya 189 (694)
T PRK14502 146 RSGKAEGMILGIILTM-FSGRDYVGFIDTDNYI--PGAVWEYAKHFA 189 (694)
T ss_pred ecCcchHHHHHHHHHH-hcCCceEeEeeccCCC--CchHHHHHHHHH
Confidence 5789988887765432 3678999999999998 688888776554
No 91
>PF01644 Chitin_synth_1: Chitin synthase; InterPro: IPR004834 This region is found commonly in chitin synthases classes I, II and III 2.4.1.16 from EC. Chitin a linear homopolymer of GlcNAc residues, it is an important component of the cell wall of fungi and is synthesised on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases []. ; GO: 0004100 chitin synthase activity, 0006031 chitin biosynthetic process
Probab=81.34 E-value=14 Score=36.33 Aligned_cols=53 Identities=11% Similarity=0.131 Sum_probs=35.6
Q ss_pred EEEEeeccCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHh
Q 005037 250 LVYLAREKRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFF 308 (717)
Q Consensus 250 l~yv~Rekrp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f 308 (717)
+++.-.|+| .+|-..-...++.-+..-+.++++.+||.+.|. ++.|-++...|
T Consensus 111 ~ifclKe~N-----~kKinSHrWfFnaf~~~l~P~vcvllDvGT~P~-~~siy~Lwkaf 163 (163)
T PF01644_consen 111 IIFCLKEKN-----AKKINSHRWFFNAFCRQLQPNVCVLLDVGTKPG-KDSIYHLWKAF 163 (163)
T ss_pred EEEEecccc-----ccccchhhHHHHHHHhhcCCcEEEEEecCCCcC-chHHHHHHhhC
Confidence 555666664 345443334444333346899999999999997 99998876543
No 92
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=75.58 E-value=53 Score=38.16 Aligned_cols=48 Identities=10% Similarity=0.171 Sum_probs=36.6
Q ss_pred EEEEeeccCCCCCCCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHH
Q 005037 250 LVYLAREKRPWHFQNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDAL 305 (717)
Q Consensus 250 l~yv~Rekrp~~~~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v 305 (717)
+.+++.... .-.++.+|+.+.+.. .+.++++++|-|+..+ +++|.++=
T Consensus 316 i~~i~~~~~----~fsr~~~Ld~g~~~~---~~d~L~f~~Dvd~~f~-~~fL~rcR 363 (499)
T PF05679_consen 316 IKWISVKTG----EFSRGAALDVGAKKF---PPDSLLFFCDVDMVFT-SDFLNRCR 363 (499)
T ss_pred eEEEEecCC----CccHHHHHHhhcccC---CCCcEEEEEeCCcccC-HHHHHHHH
Confidence 555555311 346889999999853 5678999999999997 99998863
No 93
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=59.51 E-value=12 Score=40.77 Aligned_cols=46 Identities=17% Similarity=0.193 Sum_probs=33.7
Q ss_pred HHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEE
Q 005037 270 MNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFV 320 (717)
Q Consensus 270 LN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~V 320 (717)
.|.|++. +..++++++|+|++|. +++-+++..+........+.++|
T Consensus 119 RNvAr~~----a~T~~v~~~DvD~~ps-~~l~~~l~~~~~~~~~~~~~a~V 164 (317)
T PF13896_consen 119 RNVARSG----ARTDYVFLLDVDFLPS-PGLYEKLLRFARRNIDKSKTAFV 164 (317)
T ss_pred HHHHHHh----cCcceEEEecceeeeC-cchHHHHHHHhhhhccCCceEEE
Confidence 4566665 6899999999999997 88777776665533334567776
No 94
>PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function.
Probab=54.56 E-value=1.4e+02 Score=31.27 Aligned_cols=43 Identities=19% Similarity=0.121 Sum_probs=29.6
Q ss_pred hHHHHHHHHHhcccCCCccEEEE--EcCCCCCCchHHHHHHHHHhhc
Q 005037 266 KAGAMNALIRVSSKISNGQVILN--VDCDMYSNNSQVVRDALCFFID 310 (717)
Q Consensus 266 KAGALN~al~~s~~~t~gd~Il~--lDAD~~~~~p~~L~~~v~~f~d 310 (717)
...++..+++... ...+++++. +|.|.-+. .|+++++-.+..+
T Consensus 97 ~~~~~~~~~~~~~-~~~~~~~~~~RLDdDDAl~-~dFV~rlr~~a~~ 141 (234)
T PF11316_consen 97 HRDAMRRAINAAR-RDGADPVLQFRLDDDDALH-RDFVARLRRAAAD 141 (234)
T ss_pred HHHHHHHHHhhhc-cCCCCEEEEEEECCcchhh-HHHHHHHHHHHHh
Confidence 5567777764321 134565555 49999997 9999999888753
No 95
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []. It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.
Probab=53.73 E-value=33 Score=36.04 Aligned_cols=28 Identities=25% Similarity=0.239 Sum_probs=21.7
Q ss_pred CCccEEEEEcCCCCCCchHHHHHHHHHhh
Q 005037 281 SNGQVILNVDCDMYSNNSQVVRDALCFFI 309 (717)
Q Consensus 281 t~gd~Il~lDAD~~~~~p~~L~~~v~~f~ 309 (717)
++.+..+.+|-|++++ .+-|++.+.-+.
T Consensus 85 ~~~~Wf~~~DDDtyv~-~~~L~~~L~~~~ 112 (252)
T PF02434_consen 85 SDKDWFCFADDDTYVN-VENLRRLLSKYD 112 (252)
T ss_dssp HT-SEEEEEETTEEE--HHHHHHHHTTS-
T ss_pred CCceEEEEEeCCceec-HHHHHHHHhhCC
Confidence 4779999999999997 888888877654
No 96
>PF05045 RgpF: Rhamnan synthesis protein F; InterPro: IPR007739 This family consists of a group of proteins which are related to the Streptococcal rhamnose-glucose polysaccharide assembly protein (RgpF). Rhamnan backbones are found in several O-polysaccharides found in phytopathogenic bacteria and are regarded as pathogenic factors [].
Probab=51.71 E-value=2.7e+02 Score=32.50 Aligned_cols=74 Identities=15% Similarity=0.139 Sum_probs=38.4
Q ss_pred CCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCc-chhhhhhHHHHHHHHHh--hhhc---cCCcc-cccccceEeh
Q 005037 295 SNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTK-NELYSNSSRIFNEVELQ--GLDG---YGCPL-YTGSGCFHRR 367 (717)
Q Consensus 295 ~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~-~d~~~~~~~~f~~~~~~--g~d~---~~~~~-~~Gtg~~~RR 367 (717)
+.+++.+.+++..|.+. +++|+|-.+..+...+. .+.++. ++-.-+-+.. |.+. ...++ ..||.+-+|.
T Consensus 380 L~s~~~v~~Il~~F~~~---p~lGlv~P~~~~~~~~~~~~~w~~-N~~~~~~L~~rlg~~~~~~~~~~~~p~GtMFW~R~ 455 (498)
T PF05045_consen 380 LGSKEYVDNILSAFEDD---PRLGLVIPDISHFRYPTIGDAWGE-NREIMKELAKRLGITKPIDDDTFFFPYGTMFWFRP 455 (498)
T ss_pred cCCHHHHHHHHHHHhhC---CCceEEeCCccccccccccccccc-cHHHHHHHHHHcCCCCCCccCCccccCccEEEeeH
Confidence 44478899999999863 37999955443322111 011111 1110111111 1110 11222 3599999999
Q ss_pred hhhcc
Q 005037 368 EILCG 372 (717)
Q Consensus 368 ~aL~~ 372 (717)
+||+.
T Consensus 456 ~AL~~ 460 (498)
T PF05045_consen 456 EALRP 460 (498)
T ss_pred HHHHH
Confidence 99987
No 97
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU. The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.
Probab=50.32 E-value=2.3e+02 Score=28.40 Aligned_cols=44 Identities=9% Similarity=-0.022 Sum_probs=33.7
Q ss_pred CChHHHHHHHHHhcccCCCccEEEEEcCCC-CCCchHHHHHHHHHhhc
Q 005037 264 NFKAGAMNALIRVSSKISNGQVILNVDCDM-YSNNSQVVRDALCFFID 310 (717)
Q Consensus 264 ~~KAGALN~al~~s~~~t~gd~Il~lDAD~-~~~~p~~L~~~v~~f~d 310 (717)
.+.++++-+++.... .+.+.+++++||+ ... ++.+.+++..+.+
T Consensus 73 ~g~~~ai~~a~~~~~--~~~~~vli~~~D~p~~~-~~~i~~l~~~~~~ 117 (229)
T cd02540 73 LGTGHAVKQALPALK--DFEGDVLVLYGDVPLIT-PETLQRLLEAHRE 117 (229)
T ss_pred CCCHHHHHHHHHhhc--cCCCeEEEEeCCccccC-HHHHHHHHHHHHh
Confidence 568999999988631 1268899999999 454 8889888887764
No 98
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane
Probab=49.73 E-value=26 Score=35.01 Aligned_cols=38 Identities=18% Similarity=0.242 Sum_probs=28.5
Q ss_pred HHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHh
Q 005037 267 AGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFF 308 (717)
Q Consensus 267 AGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f 308 (717)
..+++.+.+.. .+.+|++..|-|++++ ++-|.+.+.-.
T Consensus 68 ~~~~~w~~~~c---~~~~~v~k~DDD~~vn-~~~l~~~L~~~ 105 (195)
T PF01762_consen 68 LAGLKWASKHC---PNAKYVLKVDDDVFVN-PDRLVSFLKSL 105 (195)
T ss_pred HHHHHHHHhhC---CchhheeecCcEEEEe-hHHhhhhhhhc
Confidence 35677777763 5689999999999997 87766655443
No 99
>KOG4179 consensus Lysyl hydrolase/glycosyltransferase family 25 [Posttranslational modification, protein turnover, chaperones]
Probab=46.49 E-value=17 Score=40.45 Aligned_cols=37 Identities=19% Similarity=0.039 Sum_probs=30.2
Q ss_pred ChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHH
Q 005037 265 FKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALC 306 (717)
Q Consensus 265 ~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~ 306 (717)
-|--|+|.|-.- -+|++++.|+|+...++|.|.-.+.
T Consensus 97 lKeea~~~~r~~-----~adyilf~d~d~lLts~dTl~llm~ 133 (568)
T KOG4179|consen 97 LKEEALNWARSG-----WADYILFKDEDNLLTSGDTLPLLMN 133 (568)
T ss_pred HHHHHHHHHHhh-----hcceeEEeehhheeeCCchHhHHHh
Confidence 366788887653 5799999999999999998877664
No 100
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=46.48 E-value=29 Score=44.25 Aligned_cols=204 Identities=17% Similarity=0.109 Sum_probs=103.9
Q ss_pred eccCCCCC--CCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHH------HHhhccC-CCCeEEEEeccce
Q 005037 255 REKRPWHF--QNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDAL------CFFIDEE-KGHEVAFVQFPQN 325 (717)
Q Consensus 255 Rekrp~~~--~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v------~~f~d~~-~~~~vg~VQ~Pq~ 325 (717)
|-|-||.+ ..||.-|.|+|+-. +.||++=.+|+. ..+.+++++ .-|.... ....++.+.....
T Consensus 1039 rIkLpG~pilGeGKpeNQNhaiiF----tRGE~iQtIDmN----QDnYlEE~lKmRnlL~EF~~~~~g~r~ptIlG~RE~ 1110 (1679)
T KOG0916|consen 1039 RIKLPGPPILGEGKPENQNHAIIF----TRGEAIQTIDMN----QDNYLEEALKMRNLLQEFEELHLGIRPPTILGAREH 1110 (1679)
T ss_pred EEeCCCCCcCCCCCCcccCceeee----ecchhhheeccc----chHHHHHHHHHHHHHHHHHhhcCCCCCCceeeehhh
Confidence 33445544 37899999999977 799999999985 234555554 3444322 2234555554433
Q ss_pred eccCCc---chhhhhhHHHHHHHHHhhhhccCC-cccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHh
Q 005037 326 FDNVTK---NELYSNSSRIFNEVELQGLDGYGC-PLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEET 401 (717)
Q Consensus 326 f~n~~~---~d~~~~~~~~f~~~~~~g~d~~~~-~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~ 401 (717)
....+- .|..+++...|--.-++-+...++ -+.-|.==++.|-..-- -||..+.+
T Consensus 1111 IFt~svssLa~fms~qEqSFvTlgqR~LA~p~~vr~HYGHPD~~drif~~T--------------RGGvSKAs------- 1169 (1679)
T KOG0916|consen 1111 IFTGSVSSLAWFMSGQEQSFVTLGQRTLANPGGVRLHYGHPDVFDRIFHIT--------------RGGVSKAS------- 1169 (1679)
T ss_pred eecCCchHHHHHHccCccchhhHHHHHhccccceeeecCCCcHhhhhhhhc--------------cccchHhh-------
Confidence 222111 122333333333333333333333 22233333333311111 23332211
Q ss_pred hhhcccccccccCCcCcccccCCCCCcchHHHHHHHHhcCCeEEEeCCCCccccccCC-cCHHHHHHHHHHHhcchHHHH
Q 005037 402 SKALASCTYERNTQWGKEMGLKYGCPAEDVVTGLSIQSRGWKSVYSKPERDAFLGVSP-TTLLQLLVQHKRWSEGNFQIF 480 (717)
Q Consensus 402 ~~~v~~c~Ye~~t~wG~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~a~~g~aP-~tl~~~~~Qr~RWa~G~lqil 480 (717)
-|. +++||+..|+....||-++.+|.- ...|-.- -.+.+-..=-.+-+.|+-|-.
T Consensus 1170 ------------------k~i---nlsEDIfAG~n~tlRgG~itH~EY---iQvGKGRDvGlnqI~~FeaKia~G~GEQ~ 1225 (1679)
T KOG0916|consen 1170 ------------------KGI---NLSEDIFAGFNATLRGGNITHHEY---IQVGKGRDVGLNQISNFEAKIANGNGEQT 1225 (1679)
T ss_pred ------------------ccc---ccchHhhhhhhHHhhCCCccccee---eecccccccCcchhhhhhhhhcCCCcchh
Confidence 022 689999999999999999988852 1122211 122333333456788888877
Q ss_pred HhhhcccccccCCCchhHHHH-HhhhhhhhhHHH
Q 005037 481 ISKYCPAWHAHGKISLGFRLG-YCCYGLWAPSCL 513 (717)
Q Consensus 481 ~~~~~pl~~~~~~l~~~qrl~-y~~~~~~~~~~~ 513 (717)
+||.--. +| .++.+-.-|+ |....-++++++
T Consensus 1226 LSRd~Yr-LG-~~ldffRmLSfyftt~GF~~n~m 1257 (1679)
T KOG0916|consen 1226 LSRDYYR-LG-TQLDFFRMLSFYFTTVGFYFNNM 1257 (1679)
T ss_pred hhHHHHH-hc-ccccHHHHHHHHhccccHHHHhH
Confidence 7763221 24 2455554443 333333444443
No 101
>KOG3916 consensus UDP-Gal:glucosylceramide beta-1,4-galactosyltransferase [Carbohydrate transport and metabolism]
Probab=40.65 E-value=1.2e+02 Score=33.38 Aligned_cols=34 Identities=18% Similarity=0.057 Sum_probs=26.6
Q ss_pred CChHHHHHHHHHhcccCCCccEEEEEcCCCCCCc
Q 005037 264 NFKAGAMNALIRVSSKISNGQVILNVDCDMYSNN 297 (717)
Q Consensus 264 ~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~ 297 (717)
-.+|.=||.|...+.....-|-+++-|.|++|.|
T Consensus 197 FNRakL~NVGf~eAlkd~~wdCfIFHDVDllPen 230 (372)
T KOG3916|consen 197 FNRAKLLNVGFLEALKDYGWDCFIFHDVDLLPEN 230 (372)
T ss_pred ccHHHhhhhHHHHHHHhcCCCEEEEecccccccC
Confidence 3478889988887543456789999999999984
No 102
>TIGR03584 PseF pseudaminic acid CMP-transferase. The sequences in this family include the pfam02348 (cytidyltransferase) domain and are homologous to the NeuA protein responsible for the transfer of CMP to neuraminic acid. According to, this gene is responsible for the transfer of CMP to the structurally related sugar, pseudaminic acid which is observed as a component of sugar modifications of flagellin in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci.
Probab=40.49 E-value=3.1e+02 Score=28.01 Aligned_cols=59 Identities=7% Similarity=-0.004 Sum_probs=40.0
Q ss_pred CChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEec
Q 005037 264 NFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQF 322 (717)
Q Consensus 264 ~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~ 322 (717)
-+...++.+++.......+.|++++++||+=.-+++.+++++..|.+.+.+.-+.++..
T Consensus 76 ~~~~~si~~~l~~l~~~~~~d~v~~l~~tsPl~~~~~I~~~i~~~~~~~~ds~~sv~~~ 134 (222)
T TIGR03584 76 TGTAPVVKHAIEELKLQKQYDHACCIYATAPFLQAKILKEAFELLKQPNAHFVFSVTSF 134 (222)
T ss_pred CCchHHHHHHHHHHhhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEeecc
Confidence 34556677776642111247999999999988889999999998876433344455543
No 103
>PLN03153 hypothetical protein; Provisional
Probab=39.30 E-value=1.6e+02 Score=34.41 Aligned_cols=27 Identities=15% Similarity=0.075 Sum_probs=22.9
Q ss_pred CCccEEEEEcCCCCCCchHHHHHHHHHh
Q 005037 281 SNGQVILNVDCDMYSNNSQVVRDALCFF 308 (717)
Q Consensus 281 t~gd~Il~lDAD~~~~~p~~L~~~v~~f 308 (717)
.+.+.++++|.|++.. ++-|.+.+.-+
T Consensus 209 pd~kWfVf~DDDTyf~-~~NLv~~Ls~Y 235 (537)
T PLN03153 209 PDVRWFVLGDDDTIFN-ADNLVAVLSKY 235 (537)
T ss_pred CCCCEEEEecCCcccc-HHHHHHHHhhc
Confidence 6889999999999997 87777777655
No 104
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional
Probab=37.91 E-value=80 Score=35.36 Aligned_cols=41 Identities=5% Similarity=0.045 Sum_probs=30.6
Q ss_pred hHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhc
Q 005037 266 KAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFID 310 (717)
Q Consensus 266 KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d 310 (717)
....+-+|++.. +.|++++.|||+=.-+++.+++++..+.+
T Consensus 83 r~~SV~~gL~~l----~~d~VLVhdadrPfv~~e~I~~li~~~~~ 123 (378)
T PRK09382 83 RQESVRNALEAL----DSEYVLIHDAARPFVPKELIDRLIEALDK 123 (378)
T ss_pred HHHHHHHHHHhc----CCCeEEEeeccccCCCHHHHHHHHHHhhc
Confidence 456677777762 45999999999754459999998877654
No 105
>KOG3588 consensus Chondroitin synthase 1 [Carbohydrate transport and metabolism]
Probab=36.82 E-value=1.1e+02 Score=33.89 Aligned_cols=130 Identities=17% Similarity=0.203 Sum_probs=72.5
Q ss_pred hHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEeccceeccCCcchhhhhhH--HHHH
Q 005037 266 KAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFPQNFDNVTKNELYSNSS--RIFN 343 (717)
Q Consensus 266 KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~--~~f~ 343 (717)
.|-||-.+-+.- .+--++.++|.|.+.. .++|.+.-- .- ..+++|- +|..|...++.-.|++.- ..+.
T Consensus 300 Ra~aL~vGAe~~---~~nvLLFfcDVDi~FT-~efL~rcr~--Nt-~~gkqiy---fPivFS~ynp~ivy~~~~~~p~e~ 369 (494)
T KOG3588|consen 300 RAKALMVGAETL---NANVLLFFCDVDIYFT-TEFLNRCRL--NT-ILGKQIY---FPIVFSQYNPEIVYEQDKPLPAEQ 369 (494)
T ss_pred hhHHHHhhHHHh---ccceeEEEeccceeeh-HHHHHHHhh--cc-CCCceEE---EEEEEeecCcceeecCCCCCchhH
Confidence 456777777762 2334677889999998 999987532 11 1233443 333343323222222111 1111
Q ss_pred HHHHhhhhccCCcccccccceEehhhhccCCCCchhhHhhhccCCCccchhhhhHHHhhhhcccccccccCCcCcccccC
Q 005037 344 EVELQGLDGYGCPLYTGSGCFHRREILCGSKYNKETKIEWKSKKDSKGEESLLDLEETSKALASCTYERNTQWGKEMGLK 423 (717)
Q Consensus 344 ~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~igg~~~~~~~~~~~~~~~v~~c~Ye~~t~wG~~~G~~ 423 (717)
.....+..|.---|--|--|.+|-+.+. +|||+.+- .||-
T Consensus 370 ~~~~~~~tGfwRdfGfGmtc~yrsd~~~---------------vgGFD~~I-------------------------~GWG 409 (494)
T KOG3588|consen 370 QLVIKKDTGFWRDFGFGMTCQYRSDFLT---------------VGGFDMEI-------------------------KGWG 409 (494)
T ss_pred heeeccccccccccCCceeEEeecccee---------------ecCcceee-------------------------eccC
Confidence 1111122222223334666888887654 89998432 2552
Q ss_pred CCCCcchHHHHHHHHhcCCeEEEeCC
Q 005037 424 YGCPAEDVVTGLSIQSRGWKSVYSKP 449 (717)
Q Consensus 424 ~~svtED~~t~~rl~~~Gwrsvy~~~ 449 (717)
.||+++=-+-...|-+++-.++
T Consensus 410 ----~EDV~Ly~K~v~~~l~viR~p~ 431 (494)
T KOG3588|consen 410 ----GEDVDLYRKYVHSGLKVIRTPE 431 (494)
T ss_pred ----cchHHHHHHHHhcCcEEEecCC
Confidence 5899999998889988877653
No 106
>KOG1413 consensus N-acetylglucosaminyltransferase I [Carbohydrate transport and metabolism]
Probab=32.60 E-value=85 Score=34.68 Aligned_cols=49 Identities=16% Similarity=0.298 Sum_probs=40.5
Q ss_pred CCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCC-CCCeEEEEEeCCCChhhHH
Q 005037 97 KLPGVDIFVCTADPKIEPPMMVINTVLSVMAYDYP-TDKLSVYLSDDASSDLTFY 150 (717)
Q Consensus 97 ~~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP-~~kl~v~V~DDg~sd~T~~ 150 (717)
..|.+-|+|=+|| -| +.+++++..++.+. | ++++-++|+-||+...+-.
T Consensus 65 ~~~v~pvvVf~cs---R~-~~lr~~v~kll~yr-PsaekfpiiVSQD~~~e~vk~ 114 (411)
T KOG1413|consen 65 WPPVIPVVVFACS---RA-DALRRHVKKLLEYR-PSAEKFPIIVSQDCEKEAVKK 114 (411)
T ss_pred CCCceeEEEEecC---cH-HHHHHHHHHHHHhC-cchhhcCEEEeccCCcHHHHH
Confidence 3566778888888 44 78999999999999 7 6799999999999876543
No 107
>PF06306 CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (CgtA); InterPro: IPR010446 This family consists of several beta-1,4-N-acetylgalactosaminyltransferase proteins from Campylobacter jejuni [].
Probab=32.25 E-value=1.4e+02 Score=32.60 Aligned_cols=52 Identities=25% Similarity=0.340 Sum_probs=35.1
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhc
Q 005037 99 PGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKF 169 (717)
Q Consensus 99 P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~ 169 (717)
-.+.-||-.-| |. +.++.++.|++-.= ++. |+.-.| |+|.|-|.+.| ||++|
T Consensus 87 l~~~~~iRvKn---E~-~tl~~si~S~Lpai---~~g-VI~yNd-c~D~t~Eiil~----------fckky 138 (347)
T PF06306_consen 87 LNPWAFIRVKN---EA-MTLAESIESILPAI---DEG-VIGYND-CTDGTEEIILE----------FCKKY 138 (347)
T ss_pred CCcceEEEEcc---hh-hhHHHHHHHHHHHH---hcc-EEEeec-CCCCHHHHHHH----------HHHhC
Confidence 36677999999 54 68999999988421 232 444444 56777666655 89887
No 108
>TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial. In many molybdopterin-containing enzymes, including nitrate reductase and dimethylsulfoxide reductase, the cofactor is molybdopterin-guanine dinucleotide. The family described here contains MobA, molybdopterin-guanine dinucleotide biosynthesis protein A, from the Proteobacteria only. MobA can reconstitute molybdopterin-guanine dinucleotide biosynthesis without the product of the neighboring gene MobB. The probable MobA proteins of other lineages differ sufficiently that they are not included in scope of this family.
Probab=30.65 E-value=1.7e+02 Score=28.33 Aligned_cols=42 Identities=17% Similarity=0.180 Sum_probs=33.9
Q ss_pred CChHHHHHHHHHhcccCCCccEEEEEcCCC-CCCchHHHHHHHHHhhc
Q 005037 264 NFKAGAMNALIRVSSKISNGQVILNVDCDM-YSNNSQVVRDALCFFID 310 (717)
Q Consensus 264 ~~KAGALN~al~~s~~~t~gd~Il~lDAD~-~~~~p~~L~~~v~~f~d 310 (717)
.+-.+++-.|++. .+.|.+++++||+ .++ ++.+++++..+.+
T Consensus 73 ~g~~~si~~al~~----~~~~~vlv~~~D~P~i~-~~~i~~l~~~~~~ 115 (186)
T TIGR02665 73 PGPLAGILAGLRW----AGTDWVLTVPCDTPFLP-EDLVARLAAALEA 115 (186)
T ss_pred CCCHHHHHHHHHh----cCCCeEEEEecCCCcCC-HHHHHHHHHHhhc
Confidence 5677888888886 3568999999999 565 9999999887754
No 109
>KOG2287 consensus Galactosyltransferases [Carbohydrate transport and metabolism]
Probab=29.67 E-value=2e+02 Score=31.87 Aligned_cols=24 Identities=25% Similarity=0.494 Sum_probs=19.6
Q ss_pred CCccEEEEEcCCCCCCchHHHHHHH
Q 005037 281 SNGQVILNVDCDMYSNNSQVVRDAL 305 (717)
Q Consensus 281 t~gd~Il~lDAD~~~~~p~~L~~~v 305 (717)
.+++||+-.|.|++++ ++-|.+.+
T Consensus 186 p~akfi~K~DDDvfv~-~~~L~~~L 209 (349)
T KOG2287|consen 186 PDAKFILKIDDDVFVN-PDNLLEYL 209 (349)
T ss_pred CcceEEEeccCceEEc-HHHHHHHH
Confidence 5799999999999997 87665444
No 110
>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=26.16 E-value=1.9e+02 Score=27.66 Aligned_cols=44 Identities=11% Similarity=0.169 Sum_probs=34.4
Q ss_pred CChHHHHHHHHHhcccCCCccEEEEEcCCC-CCCchHHHHHHHHHhhc
Q 005037 264 NFKAGAMNALIRVSSKISNGQVILNVDCDM-YSNNSQVVRDALCFFID 310 (717)
Q Consensus 264 ~~KAGALN~al~~s~~~t~gd~Il~lDAD~-~~~~p~~L~~~v~~f~d 310 (717)
.+-+.++..|++... .+.|.+++++||+ .++ ++.+++++..+.+
T Consensus 74 ~G~~~~i~~al~~~~--~~~~~vlv~~~D~P~i~-~~~i~~l~~~~~~ 118 (186)
T cd04182 74 EGMSSSLAAGLEALP--ADADAVLILLADQPLVT-AETLRALIDAFRE 118 (186)
T ss_pred hCHHHHHHHHHHhcc--ccCCEEEEEeCCCCCCC-HHHHHHHHHHHHh
Confidence 567888999998742 1478999999999 554 8999999887763
No 111
>TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. This protein is a bifunctional enzyme, GlmU, which catalyzes last two reactions in the four-step pathway of UDP-N-acetylglucosamine biosynthesis from fructose-6-phosphate. Its reaction product is required from peptidoglycan biosynthesis, LPS biosynthesis in species with LPS, and certain other processes.
Probab=25.46 E-value=6.9e+02 Score=27.99 Aligned_cols=43 Identities=9% Similarity=-0.019 Sum_probs=32.9
Q ss_pred CChHHHHHHHHHhcccCCCccEEEEEcCCC-CCCchHHHHHHHHHhhc
Q 005037 264 NFKAGAMNALIRVSSKISNGQVILNVDCDM-YSNNSQVVRDALCFFID 310 (717)
Q Consensus 264 ~~KAGALN~al~~s~~~t~gd~Il~lDAD~-~~~~p~~L~~~v~~f~d 310 (717)
.+-++++..++... .+.|.++++++|+ +.+ ++.+++++..+.+
T Consensus 75 ~G~~~ai~~a~~~l---~~~~~~lv~~~D~p~i~-~~~~~~l~~~~~~ 118 (451)
T TIGR01173 75 LGTGHAVLQALPFL---PDDGDVLVLYGDVPLIS-AETLERLLEAHRQ 118 (451)
T ss_pred CchHHHHHHHHHhc---CCCCcEEEEECCcCCcC-HHHHHHHHHHHhh
Confidence 45788888888763 3447899999999 565 8889998887754
No 112
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.
Probab=25.27 E-value=2.6e+02 Score=26.94 Aligned_cols=42 Identities=17% Similarity=0.182 Sum_probs=34.0
Q ss_pred CCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHh
Q 005037 263 QNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFF 308 (717)
Q Consensus 263 ~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f 308 (717)
..+-.+++..|++. .+.+.+++++||+-.-+++.+++++..+
T Consensus 68 ~~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 109 (181)
T cd02503 68 GKGPLAGILAALRA----APADWVLVLACDMPFLPPELLERLLAAA 109 (181)
T ss_pred CCCCHHHHHHHHHh----cCCCeEEEEeCCcCCCCHHHHHHHHHhh
Confidence 35678899999987 4579999999999543599999888776
No 113
>PF04724 Glyco_transf_17: Glycosyltransferase family 17; InterPro: IPR006813 This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (2.4.1.144 from EC). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression [, ].; GO: 0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0016020 membrane
Probab=22.84 E-value=1.5e+02 Score=33.01 Aligned_cols=36 Identities=22% Similarity=0.411 Sum_probs=25.7
Q ss_pred HHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHH
Q 005037 267 AGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDA 304 (717)
Q Consensus 267 AGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~ 304 (717)
-.+|+..++.. .+..+|+|++-|.|-+|+ |+.|+.+
T Consensus 164 R~~l~~l~~~~-~~~~dDliivSDvDEIP~-p~~l~~L 199 (356)
T PF04724_consen 164 RNALNGLLRLA-GIQDDDLIIVSDVDEIPS-PETLKFL 199 (356)
T ss_pred HHHHHHHhhhc-CCCCCCEEEEcCcccccC-HHHHHHH
Confidence 34555554442 356899999999999997 8877644
No 114
>PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B ....
Probab=22.77 E-value=2.6e+02 Score=26.25 Aligned_cols=56 Identities=13% Similarity=0.140 Sum_probs=41.7
Q ss_pred CCChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhccCCCCeEEEEecc
Q 005037 263 QNFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFIDEEKGHEVAFVQFP 323 (717)
Q Consensus 263 ~~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d~~~~~~vg~VQ~P 323 (717)
..+=..++-.|++.. .+.+.++++-||+..-+++.+++++..+.+. +.+++++..+
T Consensus 69 ~~G~~~sl~~a~~~~---~~~~~vlv~~~D~p~~~~~~l~~l~~~~~~~--~~~i~~~~~~ 124 (160)
T PF12804_consen 69 GQGPLASLLAALSQL---PSSEPVLVLPCDQPFLSPELLRRLLEALEKS--PADIVVPVFR 124 (160)
T ss_dssp SCSHHHHHHHHHHTS---TTSSEEEEEETTETTS-HHHHHHHHHHHHHT--TTSEEEEEET
T ss_pred cCChHHHHHHHHHhc---ccCCCcEEEeCCccccCHHHHHHHHHHHhcc--CCcEEEEEEC
Confidence 367788888888872 2789999999999532499999999888632 2367777654
No 115
>COG4097 Predicted ferric reductase [Inorganic ion transport and metabolism]
Probab=21.49 E-value=2.6e+02 Score=31.40 Aligned_cols=79 Identities=11% Similarity=0.391 Sum_probs=49.0
Q ss_pred CCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCCeEEEEEeCCCChhhHHHHHHhhcccccchhhhhhcCCCCCCc
Q 005037 97 KLPGVDIFVCTADPKIEPPMMVINTVLSVMAYDYPTDKLSVYLSDDASSDLTFYALMEASHFSTHWIPYCKKFNVEPRSP 176 (717)
Q Consensus 97 ~~P~VdV~I~t~n~~~Ep~~~v~~Tv~s~la~dYP~~kl~v~V~DDg~sd~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p 176 (717)
.-|+|+.+-|..| +.+.+-.+-++++.+ .-| .+++.++|.+.++- .. .... .|+.-++|.|
T Consensus 342 s~~~V~L~Y~~~n---~e~~~y~~eLr~~~q-kl~--~~~lHiiDSs~~g~-l~----~e~l--------er~~~~~~~~ 402 (438)
T COG4097 342 SDPPVHLFYCSRN---WEEALYAEELRALAQ-KLP--NVVLHIIDSSKDGY-LD----QEDL--------ERYPDRPRTR 402 (438)
T ss_pred cCCceEEEEEecC---CchhHHHHHHHHHHh-cCC--CeEEEEecCCCCCc-cC----HHHh--------hccccccCcc
Confidence 4589999999999 555677777877654 334 56666655554442 11 0111 2344567778
Q ss_pred hhhhhH--HHHHHHHHHHHH
Q 005037 177 AAYFIN--RLYEEMENRIQT 194 (717)
Q Consensus 177 ~~yf~~--~~ye~~~~ri~~ 194 (717)
.-||.. ++-+.++..++.
T Consensus 403 sv~fCGP~~m~dsL~r~l~~ 422 (438)
T COG4097 403 SVFFCGPIKMMDSLRRDLKK 422 (438)
T ss_pred eEEEEcCHHHHHHHHHHHHH
Confidence 888874 477777665543
No 116
>PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed
Probab=21.05 E-value=3.2e+02 Score=26.82 Aligned_cols=43 Identities=14% Similarity=0.001 Sum_probs=33.3
Q ss_pred CChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhc
Q 005037 264 NFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFID 310 (717)
Q Consensus 264 ~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d 310 (717)
.+-.+++..+++. .+.|.+++++||+-.-+++.+++++..+.+
T Consensus 74 ~g~~~~i~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 116 (193)
T PRK00317 74 PGPLAGILAGLKQ----ARTEWVLVVPCDTPFIPPDLVARLAQAAGK 116 (193)
T ss_pred CCCHHHHHHHHHh----cCCCeEEEEcCCcCCCCHHHHHHHHHhhhc
Confidence 3456778888886 467999999999944459999999887654
No 117
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=20.75 E-value=6.2e+02 Score=25.67 Aligned_cols=60 Identities=17% Similarity=0.226 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCc
Q 005037 637 TLALLNLFCLIGAVKRVIIDDGFVKLYETMILQILLCSTLVLINWPLYQGLFLRKDNGKMPS 698 (717)
Q Consensus 637 ~l~~l~l~al~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~P~~~gl~~r~~~~~~p~ 698 (717)
.|+++.+++++-|+.-++.........-.+++..+..|+.+.+.|=+.--+.+ |+++.|.
T Consensus 101 sLl~lg~~aLlsgitaff~~nA~~~GlItlll~a~vgGfamy~my~y~yr~~a--d~sqr~~ 160 (226)
T COG4858 101 SLLFLGAMALLSGITAFFQKNAQVYGLITLLLTAVVGGFAMYIMYYYAYRMRA--DNSQRPG 160 (226)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHhhhHHHHHHHHHHHHhhc--ccccCCc
Confidence 45666777777787776643110112233444455667777666655444432 6666664
No 118
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=20.28 E-value=3.8e+02 Score=26.70 Aligned_cols=43 Identities=14% Similarity=0.095 Sum_probs=33.6
Q ss_pred CChHHHHHHHHHhcccCCCccEEEEEcCCCCCCchHHHHHHHHHhhc
Q 005037 264 NFKAGAMNALIRVSSKISNGQVILNVDCDMYSNNSQVVRDALCFFID 310 (717)
Q Consensus 264 ~~KAGALN~al~~s~~~t~gd~Il~lDAD~~~~~p~~L~~~v~~f~d 310 (717)
.+-.+++-.|++. .+.+.+++++||+-.-+++.+++++..+.+
T Consensus 78 ~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 120 (200)
T PRK02726 78 QGPLVAFAQGLPQ----IKTEWVLLLACDLPRLTVDVLQEWLQQLEN 120 (200)
T ss_pred CChHHHHHHHHHh----CCCCcEEEEeCCCCCCCHHHHHHHHHHhhc
Confidence 3556777788876 356899999999987679999988887653
Done!