Query 005039
Match_columns 717
No_of_seqs 319 out of 1219
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 13:31:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005039.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005039hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kas_A Transferrin receptor pr 99.9 1.7E-23 5.8E-28 242.3 14.1 167 1-167 306-491 (640)
2 3fed_A Glutamate carboxypeptid 99.9 2.4E-22 8.3E-27 234.7 10.9 166 1-166 352-553 (707)
3 4fuu_A Leucine aminopeptidase; 99.8 9.2E-22 3.2E-26 209.7 8.2 150 1-156 135-307 (309)
4 4f9u_A CG32412; alpha/beta hyd 99.8 1.3E-20 4.3E-25 200.9 13.2 162 1-165 111-305 (312)
5 4fai_A CG5976, isoform B; alph 99.8 4.1E-20 1.4E-24 198.9 10.8 155 1-156 137-321 (330)
6 3iib_A Peptidase M28; YP_92679 99.8 5.8E-19 2E-23 197.1 12.1 156 1-163 277-436 (444)
7 3gux_A Putative Zn-dependent e 99.8 1.7E-18 5.8E-23 185.1 11.3 149 1-156 137-312 (314)
8 1tkj_A Aminopeptidase, SGAP; d 99.8 4.8E-18 1.6E-22 178.7 14.4 157 1-164 105-282 (284)
9 3tc8_A Leucine aminopeptidase; 99.8 1.5E-18 5.1E-23 185.2 10.4 147 1-156 135-308 (309)
10 3pb6_X Glutaminyl-peptide cycl 99.7 6.2E-18 2.1E-22 181.8 11.6 153 1-156 142-326 (330)
11 2ek8_A Aminopeptidase; metallo 99.7 1.3E-17 4.6E-22 184.7 14.0 153 1-166 248-408 (421)
12 2afw_A Glutaminyl-peptide cycl 99.7 5.2E-17 1.8E-21 174.5 11.5 156 1-157 135-326 (329)
13 1rtq_A Bacterial leucyl aminop 99.6 4.2E-16 1.4E-20 165.0 12.1 158 1-164 125-293 (299)
14 3k9t_A Putative peptidase; str 99.5 4E-14 1.4E-18 154.2 12.0 148 1-161 204-357 (435)
15 2wyr_A Cobalt-activated peptid 98.3 2.1E-06 7.3E-11 91.5 9.7 137 1-156 181-331 (332)
16 4h2k_A Succinyl-diaminopimelat 98.1 5.5E-06 1.9E-10 85.8 9.7 143 1-159 111-268 (269)
17 3t68_A Succinyl-diaminopimelat 98.1 3.9E-06 1.3E-10 86.9 8.3 148 1-159 111-268 (268)
18 1y0y_A FRV operon protein FRVX 98.1 8.9E-06 3.1E-10 87.5 10.7 141 1-159 190-350 (353)
19 1vhe_A Aminopeptidase/glucanas 98.1 9.8E-06 3.4E-10 88.0 10.1 143 1-160 192-355 (373)
20 2gre_A Deblocking aminopeptida 98.0 7.8E-06 2.7E-10 87.9 8.2 138 1-155 194-343 (349)
21 2fvg_A Endoglucanase; TM1049, 97.7 2.8E-05 9.5E-10 83.2 6.0 141 1-159 175-335 (340)
22 3kl9_A PEPA, glutamyl aminopep 96.8 0.0044 1.5E-07 66.9 10.2 138 1-158 190-345 (355)
23 1ylo_A Hypothetical protein SF 96.3 0.011 3.7E-07 62.8 9.8 140 1-159 177-338 (348)
24 1vho_A Endoglucanase; structur 96.2 0.016 5.5E-07 61.6 10.2 145 1-160 180-337 (346)
25 2vpu_A TET3, 354AA long hypoth 95.0 0.1 3.5E-06 56.2 10.8 137 2-159 194-349 (354)
26 1q7l_A Aminoacylase-1; catalys 94.9 0.013 4.5E-07 57.5 3.3 52 1-52 121-174 (198)
27 3cpx_A Aminopeptidase, M42 fam 94.7 0.029 9.8E-07 59.4 5.6 125 19-156 183-320 (321)
28 2zog_A Cytosolic non-specific 94.6 0.033 1.1E-06 61.7 5.9 55 1-55 144-200 (479)
29 3dlj_A Beta-Ala-His dipeptidas 93.6 0.054 1.8E-06 60.4 5.2 56 1-56 151-208 (485)
30 3ct9_A Acetylornithine deacety 93.4 0.066 2.2E-06 57.1 5.2 51 1-56 113-164 (356)
31 1cg2_A Carboxypeptidase G2; me 93.0 0.046 1.6E-06 59.0 3.3 55 1-57 127-181 (393)
32 1xmb_A IAA-amino acid hydrolas 92.4 0.1 3.4E-06 57.0 5.0 52 1-54 125-176 (418)
33 1lfw_A PEPV; hydrolase, dipept 91.3 0.14 4.6E-06 56.6 4.5 43 1-43 127-169 (470)
34 2pok_A Peptidase, M20/M25/M40 91.2 0.077 2.6E-06 58.9 2.5 56 1-56 155-211 (481)
35 3isx_A Endoglucanase; TM1050, 91.0 0.56 1.9E-05 50.2 8.8 131 2-154 189-341 (343)
36 3khx_A Putative dipeptidase sa 90.5 0.18 6.3E-06 56.3 4.7 43 1-43 146-188 (492)
37 3pfe_A Succinyl-diaminopimelat 89.5 0.17 5.8E-06 56.2 3.3 55 1-56 138-193 (472)
38 3pfo_A Putative acetylornithin 89.5 0.2 6.9E-06 54.5 3.8 54 1-57 152-205 (433)
39 2rb7_A Peptidase, M20/M25/M40 89.1 0.16 5.4E-06 54.3 2.6 51 1-55 108-164 (364)
40 3tx8_A Succinyl-diaminopimelat 88.8 0.37 1.2E-05 51.2 5.2 55 1-56 111-167 (369)
41 1ysj_A Protein YXEP; M20 famil 88.4 0.39 1.3E-05 52.0 5.1 51 1-53 131-181 (404)
42 3io1_A Aminobenzoyl-glutamate 88.1 0.36 1.2E-05 53.1 4.7 52 1-54 158-209 (445)
43 3n5f_A L-carbamoylase, N-carba 86.6 0.36 1.2E-05 52.2 3.5 40 1-40 98-142 (408)
44 3gb0_A Peptidase T; NP_980509. 86.1 0.49 1.7E-05 50.3 4.2 53 1-57 116-168 (373)
45 3ife_A Peptidase T; metallopep 85.7 0.34 1.2E-05 53.0 2.7 51 1-55 174-224 (434)
46 1fno_A Peptidase T; metallo pe 85.6 0.31 1.1E-05 52.9 2.3 51 1-56 148-198 (417)
47 3ram_A HMRA protein; two-domai 85.1 0.28 9.5E-06 53.1 1.6 54 2-56 103-158 (394)
48 2f7v_A Aectylcitrulline deacet 84.1 0.55 1.9E-05 50.0 3.4 39 15-56 121-160 (369)
49 2v8h_A Beta-alanine synthase; 83.6 0.51 1.7E-05 52.3 3.0 39 1-39 132-175 (474)
50 1vgy_A Succinyl-diaminopimelat 82.4 0.77 2.6E-05 49.3 3.8 55 1-55 111-167 (393)
51 3rza_A Tripeptidase; phosphory 80.8 0.94 3.2E-05 48.7 3.7 52 1-56 137-188 (396)
52 1z2l_A Allantoate amidohydrola 80.2 0.65 2.2E-05 50.3 2.2 39 1-39 102-145 (423)
53 3isz_A Succinyl-diaminopimelat 74.3 1.9 6.6E-05 45.4 3.8 55 1-55 108-164 (377)
54 3mru_A Aminoacyl-histidine dip 73.5 1.6 5.6E-05 48.6 3.1 42 12-56 134-175 (490)
55 2qyv_A XAA-His dipeptidase; YP 65.3 3.4 0.00011 45.7 3.3 41 14-57 133-173 (487)
56 2ijz_A Probable M18-family ami 62.3 13 0.00043 40.9 7.2 126 2-141 244-412 (428)
57 1q7l_B Aminoacylase-1; catalys 61.8 13 0.00043 31.0 5.6 59 99-161 23-82 (88)
58 2glf_A Probable M18-family ami 40.9 63 0.0022 35.6 8.4 51 99-154 397-447 (450)
59 2wzn_A TET3, 354AA long hypoth 36.8 33 0.0011 34.0 5.0 57 99-160 293-350 (354)
60 2l8s_A Integrin alpha-1; trans 36.5 59 0.002 25.3 5.1 7 416-422 5-11 (54)
61 2lx0_A Membrane fusion protein 34.0 38 0.0013 22.7 3.1 18 425-442 7-24 (32)
62 3gb0_A Peptidase T; NP_980509. 30.2 56 0.0019 34.1 5.6 52 100-157 320-371 (373)
63 3pfo_A Putative acetylornithin 27.2 35 0.0012 36.6 3.4 56 100-160 375-430 (433)
64 3rza_A Tripeptidase; phosphory 23.8 69 0.0024 33.8 4.9 55 100-160 340-394 (396)
65 1cg2_A Carboxypeptidase G2; me 22.7 45 0.0015 35.3 3.1 56 99-159 335-391 (393)
66 3ife_A Peptidase T; metallopep 22.2 54 0.0018 35.3 3.7 55 99-159 378-432 (434)
67 1fno_A Peptidase T; metallo pe 21.6 68 0.0023 34.1 4.3 59 99-163 352-410 (417)
68 2knc_A Integrin alpha-IIB; tra 20.8 1.7E+02 0.0058 22.7 5.2 6 416-421 8-13 (54)
No 1
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=99.89 E-value=1.7e-23 Score=242.26 Aligned_cols=167 Identities=16% Similarity=0.177 Sum_probs=140.5
Q ss_pred ChHHHHHHhcC----CCCCCceEEEEecCccccCccchHHHHHhCC-C-ccceeEEEEeccCCCCCcceEEEeCC-ChHH
Q 005039 1 MLELARVMSQW----AHEFKNAVIFLFNTGEEEGLNGAHSFVTQHP-W-STTIRVAVDLEAMGIGGRSALFQAGP-NLWA 73 (717)
Q Consensus 1 mLElaR~l~~~----~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp-~-~~~i~a~INlD~~G~gG~~~lf~~g~-~~~L 73 (717)
|||+||+|++. +++|+|+|+|++|+|||.||+||++|+++|. + .+++.++||+||+|.|++.+.++++| ..++
T Consensus 306 lLe~ar~l~~~~~~~g~~p~r~I~f~~~~~EE~gl~GS~~~~~~~~~~l~~~~~a~iNlD~~~~G~~~l~~~~~p~l~~l 385 (640)
T 3kas_A 306 LLKLAQMFSDMVLKDGFQPSRSIIFASWSAGDFGSVGATEWLEGYLSSLHLKAFTYINLDKAVLGTSNFKVSASPLLYTL 385 (640)
T ss_dssp HHHHHHHHHHHHHTSCCCCSEEEEEEEESSGGGTSHHHHHHHHHTTTTGGGTEEEEEECTTCBSCSSEEEEEECGGGHHH
T ss_pred HHHHHHHHHHhhhhcCCCCCCcEEEEEECCcccCchhHHHHHHhhhhhhhhCEEEEEecccCccCCCceEEEeCHHHHHH
Confidence 68999999853 6799999999999999999999999999884 3 48999999999999988888888777 4677
Q ss_pred HHHHHHhcCCCCCc-ccccc-ccc--cCCCCCCCChHhhhhcCCCcEEEEeeeCC-CC-CCCCCCCCcCCCCH------h
Q 005039 74 VENFAAVAKYPSGQ-IIGQD-LFA--SGVFETATDFQVYTEVAGLSGLDFAYTDK-SA-VYHTKNDRLDLLKP------G 141 (717)
Q Consensus 74 ~~~y~~~a~~P~~~-~~~~~-~f~--~g~ipsdTD~~~F~~~~GIPgLd~a~~~~-~~-~YHT~~Dt~d~i~~------~ 141 (717)
++.+.+.+++|.+. ++.++ .|. .+.++++|||.+|.++.||||+|+++..+ .| +|||++||+|++++ .
T Consensus 386 ~~~~~~~v~~P~~~~tl~~~~~w~~~~~~~~~~sD~~~F~~~~GIP~~~~~~~~~~~y~~yHT~~Dt~~~i~~~~~~~~~ 465 (640)
T 3kas_A 386 IEKTMQNVKHPVTGQFLYQDSNWASKVEKLTLDNAAFPFLAYSGIPAVSFCFCEDTDYPYLGTTMDTYKELIERIPELNK 465 (640)
T ss_dssp HHHHHTTCBCTTTCSBSCCCTTGGGGCCCCCTTSTHHHHHHHHCCCEEEEEEECSSCCTTTTSTTCCHHHHHHHCTTHHH
T ss_pred HHHHHHhCCCCCCCCceecccccccccCCCCCCcchHHHHHhCCCCeeeccccCCCCCCCcCCccccHHHHHhhcCcHHH
Confidence 77777777889763 33332 343 46789999999999889999999999865 34 59999999998764 4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCC
Q 005039 142 SLQHLGENMLDFLLQTASSTSIPKGN 167 (717)
Q Consensus 142 slq~~g~~~l~lv~~la~~~~l~~~~ 167 (717)
..+.+++.+..++.+||+++.+|.+.
T Consensus 466 ~h~~~a~~~g~l~l~La~~~~lP~~~ 491 (640)
T 3kas_A 466 VARAAAEVAGQFVIKLTHDVELNLDY 491 (640)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCCCCT
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCH
Confidence 57778999999999999999999754
No 2
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=99.86 E-value=2.4e-22 Score=234.74 Aligned_cols=166 Identities=17% Similarity=0.235 Sum_probs=138.1
Q ss_pred ChHHHHHHhc---CCCCCCceEEEEecCccccCccchHHHHHhCC--CccceeEEEEeccCCCCCcceEEEeCC-ChHHH
Q 005039 1 MLELARVMSQ---WAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHP--WSTTIRVAVDLEAMGIGGRSALFQAGP-NLWAV 74 (717)
Q Consensus 1 mLElaR~l~~---~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp--~~~~i~a~INlD~~G~gG~~~lf~~g~-~~~L~ 74 (717)
|||+||+|++ .+++|+|+|+|++|+|||.||+||++|+++|+ +.+++.++||+||+|+|++.+.++++| ..+++
T Consensus 352 lLe~ar~l~~~~~~g~~p~r~I~f~~~~~EE~Gl~GS~~~~~~~~~~~~~~~~a~iNlD~~~~g~~~~~~~~sp~l~~~i 431 (707)
T 3fed_A 352 LQEIARSFGKLMSKGWRPRRTIIFASWDAEEFGLLGSTEWAEENVKILQERSIAYINSDSSIEGNYTLRVDCTPLLYQLV 431 (707)
T ss_dssp HHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHHHHHHHHHHHHHHHHHEEEEEECSCSBSCSSEEEEEECGGGHHHH
T ss_pred HHHHHHHHHhhhhccCCCCCCEEEEEeCCccccchhHHHHHHhcchhhhhCEEEEEEecccccCCceEEEecCHHHHHHH
Confidence 6899999975 46799999999999999999999999999886 568999999999999998888999877 47788
Q ss_pred HHHHHhcCCCCC----ccccccccc------------cCCCCCCCChHhhhhcCCCcEEEEeeeCC-------CC-CCCC
Q 005039 75 ENFAAVAKYPSG----QIIGQDLFA------------SGVFETATDFQVYTEVAGLSGLDFAYTDK-------SA-VYHT 130 (717)
Q Consensus 75 ~~y~~~a~~P~~----~~~~~~~f~------------~g~ipsdTD~~~F~~~~GIPgLd~a~~~~-------~~-~YHT 130 (717)
+.+++.+++|.+ .++.+..++ .+.++++|||.+|.++.|||++|+++..+ .| +|||
T Consensus 432 ~~~~~~v~~P~~~~~~~tly~~w~~~~~~~~~~~~p~i~~lgsgSD~~~F~~~~GIPs~~~~f~~~~~~~~~~~y~~YHT 511 (707)
T 3fed_A 432 YKLTKEIPSPDDGFESKSLYESWLEKDPSPENKNLPRINKLGSGSDFEAYFQRLGIASGRARYTKNKKTDKYSSYPVYHT 511 (707)
T ss_dssp HHHHTTSBCCSTTCTTSBHHHHHHHHSEETTEEEEECEECCCSSSTTHHHHHTTCCCEEEEEEECCTTTCCSSSCTTTTS
T ss_pred HHHHhcCCCCccccccccHHHHHHhhcccccccCCcccccCCCCCChHHHHHhCCcceeccccccCccccccCCCCCcCC
Confidence 888777889976 334333332 22356899999999999999999999854 34 7999
Q ss_pred CCCCcCCCCH----h--HHHHHHHHHHHHHHHHhcCCCCCCC
Q 005039 131 KNDRLDLLKP----G--SLQHLGENMLDFLLQTASSTSIPKG 166 (717)
Q Consensus 131 ~~Dt~d~i~~----~--slq~~g~~~l~lv~~la~~~~l~~~ 166 (717)
.+||++++++ + ..+.+++.+..++.+||+++.+|.+
T Consensus 512 ~~Dt~~~~~~~~Dp~f~~h~~~a~~~g~l~l~La~~~vlP~~ 553 (707)
T 3fed_A 512 IYETFELVEKFYDPTFKKQLSVAQLRGALVYELVDSKIIPFN 553 (707)
T ss_dssp TTCCHHHHHHHTCTTCHHHHHHHHHHHHHHHHHHHCSSCCCC
T ss_pred CcccHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCccCCCC
Confidence 9999998643 3 4555889999999999999998864
No 3
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=99.84 E-value=9.2e-22 Score=209.69 Aligned_cols=150 Identities=19% Similarity=0.261 Sum_probs=112.2
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCc--------------cchHHHHHhCC-CccceeEEEEeccCCCCCcceEE
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGL--------------NGAHSFVTQHP-WSTTIRVAVDLEAMGIGGRSALF 65 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GL--------------lGS~~Fv~~hp-~~~~i~a~INlD~~G~gG~~~lf 65 (717)
|||+||+|++ .+|+|+|+|+||+|||.|+ +||++|+++++ +.++++++||+||+|++++....
T Consensus 135 lLE~ar~l~~--~~~~~~i~~~~~~~EE~Gl~~~~~~~~~~~~~l~GS~~~~~~~~~~~~~i~~~inlDmvG~~~~~~~~ 212 (309)
T 4fuu_A 135 LLEIARLVNQ--QQPELGIDIIFLDAEDYGTPQFYEGKHKEEAWCLGSQYWSRNPHVQGYNARFGILLDMVGGENSVFLK 212 (309)
T ss_dssp HHHHHHHHHH--SCCSSEEEEEEECSSSCCCCTTCCSCCCGGGSCHHHHHHHHSCSSTTCCCSEEEEECSCCBTTCCEEE
T ss_pred HHHHHHHHhh--cCCCCceEEEeecccccCccccccchhhhhhhhcchhHHHhcccccCcceEEEEeeeccCCCCCceEe
Confidence 6999999986 5789999999999999996 89999997654 45789999999999988877665
Q ss_pred EeCCC---hHHHHHHHHhcCCC-CCccccccccccCCCCCCCChHhhhhcCCCcEEEEeeeCC----CCCCCCCCCCcCC
Q 005039 66 QAGPN---LWAVENFAAVAKYP-SGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDK----SAVYHTKNDRLDL 137 (717)
Q Consensus 66 ~~g~~---~~L~~~y~~~a~~P-~~~~~~~~~f~~g~ipsdTD~~~F~~~~GIPgLd~a~~~~----~~~YHT~~Dt~d~ 137 (717)
..+.. +++.+...+.++.. .... ...+.+.. ..+||.+|.+++|||+++++.... .++|||++||+|+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~sDh~~F~~~~GIP~l~~~~~~~~~~~~~~yHT~~Dt~d~ 288 (309)
T 4fuu_A 213 EGYSEEFAPDINKKVWKAAKKAGYGKT---FIDERGDT-ITDDHLFINRLARIKTIDIIPNDPETGFPPTWHTIHDNMDH 288 (309)
T ss_dssp CHHHHHHCHHHHHHHHHHHHHTTCTTT---EEEEECCC-CCCHHHHHHHHTCCCEEEECBC----CCCTTTTSTTCSGGG
T ss_pred ecCchhhhHHHHHHHHHHHHhcCCccc---ccccCCCC-CCCChHHHHhcCCCCEEEEeccCCCCCCCCCCCCcccchhh
Confidence 53322 34444443332211 1111 11222322 346999999878999999976432 3589999999999
Q ss_pred CCHhHHHHHHHHHHHHHHH
Q 005039 138 LKPGSLQHLGENMLDFLLQ 156 (717)
Q Consensus 138 i~~~slq~~g~~~l~lv~~ 156 (717)
||+++||++|++++++++.
T Consensus 289 id~~~L~~vg~~vl~~ly~ 307 (309)
T 4fuu_A 289 IDKNTLKAVGQTVLEVIYN 307 (309)
T ss_dssp BCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhh
Confidence 9999999999999998864
No 4
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=99.83 E-value=1.3e-20 Score=200.93 Aligned_cols=162 Identities=16% Similarity=0.201 Sum_probs=117.5
Q ss_pred ChHHHHHHhc-----CCCCCCceEEEEecCccccC--------ccchHHHHHhCCC-------------ccceeEEEEec
Q 005039 1 MLELARVMSQ-----WAHEFKNAVIFLFNTGEEEG--------LNGAHSFVTQHPW-------------STTIRVAVDLE 54 (717)
Q Consensus 1 mLElaR~l~~-----~~~~p~rtIiFlf~~aEE~G--------LlGS~~Fv~~hp~-------------~~~i~a~INlD 54 (717)
|||+||+|++ .+++|+|+|+|+||||||.| |+||++|+++|++ .+++.+++|+|
T Consensus 111 lLElAR~l~~~~~~~~~~~p~~tI~fv~fdaEE~G~~~~~~~~L~GS~~~a~~~~~~~~~~~~~~~~~~~~~i~~~inlD 190 (312)
T 4f9u_A 111 LLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGEEAFKEWTDADSVYGSKHLAAKLASKRSGSQAQLAPRNIDRIEVLVLLD 190 (312)
T ss_dssp HHHHHHHTHHHHTTGGGSCSSEEEEEEEESCCSCSSSCSSSSSCHHHHHHHHHHHHCBC-------CBGGGGEEEEEEEE
T ss_pred HHHHHHHHHHHHHhhccCCCCceEEEEEecCccccccCCccccccChHHHHHHHHhhccccccccccccccceeeeeeee
Confidence 6999999974 25689999999999999988 9999999988643 24789999999
Q ss_pred cCCCCCcceEEEeCCChH----HHH---HHHHhcCCCCCccccccccccCCCCCCCChHhhhhcCCCcEEEEeeeCCCCC
Q 005039 55 AMGIGGRSALFQAGPNLW----AVE---NFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAV 127 (717)
Q Consensus 55 ~~G~gG~~~lf~~g~~~~----L~~---~y~~~a~~P~~~~~~~~~f~~g~ipsdTD~~~F~~~~GIPgLd~a~~~~~~~ 127 (717)
|+|..++..........+ +.+ ...+....+............+ ..++||.+|.+ .|||+++++.....++
T Consensus 191 mvg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~SDH~pF~~-~GIP~l~~~~~~~~~~ 267 (312)
T 4f9u_A 191 LIGARNPKFSSFYENTDGLHSSLVQIEKSLRTAGQLEGNNNMFLSRVSGG--LVDDDHRPFLD-ENVPVLHLVATPFPDV 267 (312)
T ss_dssp SCCSSSCCEEECCGGGHHHHHHHHHHHHHHHHTTCSSSSCCCEEEEECSS--CCCCTTHHHHT-TTCCEEEEECSSCCTT
T ss_pred ccccCCCCceEEEeccchhhhHHHHHHHHHHHhccccccccccccccCCC--CCCCchHHHHH-CCCCEEEEECCCCCCC
Confidence 999887664322111222 222 2222211111111111111112 23579999999 8999999988777788
Q ss_pred CCCCCCCcCCCCHhHHHHHHHHHHHHHHHHhcCCCCCC
Q 005039 128 YHTKNDRLDLLKPGSLQHLGENMLDFLLQTASSTSIPK 165 (717)
Q Consensus 128 YHT~~Dt~d~i~~~slq~~g~~~l~lv~~la~~~~l~~ 165 (717)
|||+.||+|+||+++|+++++.+..++.+.......|.
T Consensus 268 yHt~~Dt~d~id~~~l~~~~~i~~~fv~e~l~~~~~P~ 305 (312)
T 4f9u_A 268 WHTPRDNAANLHWPSIRNFNRVFRNFVYQYLKRHTSPV 305 (312)
T ss_dssp TTSTTCSGGGCCHHHHHHHHHHHHHHHHHHHHHCCSCC
T ss_pred CCCCccChhhCCHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999988776666664
No 5
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=99.81 E-value=4.1e-20 Score=198.93 Aligned_cols=155 Identities=19% Similarity=0.168 Sum_probs=109.0
Q ss_pred ChHHHHHHhc---CCCCCCceEEEEecCccccCc--------cchHHHHHhC---CCccceeEEEEeccCCCCCcceEEE
Q 005039 1 MLELARVMSQ---WAHEFKNAVIFLFNTGEEEGL--------NGAHSFVTQH---PWSTTIRVAVDLEAMGIGGRSALFQ 66 (717)
Q Consensus 1 mLElaR~l~~---~~~~p~rtIiFlf~~aEE~GL--------lGS~~Fv~~h---p~~~~i~a~INlD~~G~gG~~~lf~ 66 (717)
|||+||+|++ .+++|+|+|+|+||||||.|+ +||++|+++. .+.+++.++||+||+|.+++.....
T Consensus 137 lLE~Ar~l~~~~~~~~~p~rtI~fv~fdgEE~Gl~~~~~~~llGS~~~a~~~~~~~~~~~i~~~inlDmiG~~~~~~~~~ 216 (330)
T 4fai_A 137 LLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFEEWGPKDSIYGARHLAKKWHHEGKLDRIDMLVLLDLLGAPDPAFYSF 216 (330)
T ss_dssp HHHHHHHTHHHHGGGGTSSEEEEEEEESCCSCSSSCBTTBSCHHHHHHHHHHHHTTCSTTEEEEEEECSCSSSSCCEEEC
T ss_pred HHHHHHHHHHhhhccCCCCccEEEEEeccccccccccccchhhhhHHHHhcchhccchhceeEEEEeccCccCCCCceee
Confidence 6999999975 356899999999999999996 7999999752 3467999999999999988775544
Q ss_pred eCCChHHHHHHH----Hhc------CC---CCCccccccccccC---CCCCCCChHhhhhcCCCcEEEEeeeCCCCCCCC
Q 005039 67 AGPNLWAVENFA----AVA------KY---PSGQIIGQDLFASG---VFETATDFQVYTEVAGLSGLDFAYTDKSAVYHT 130 (717)
Q Consensus 67 ~g~~~~L~~~y~----~~a------~~---P~~~~~~~~~f~~g---~ipsdTD~~~F~~~~GIPgLd~a~~~~~~~YHT 130 (717)
..+..+...... +.. .. +.........|+.. .....+||.+|.+ .|||+++++....+.+|||
T Consensus 217 ~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SDH~pF~~-~GIP~l~~i~~~~~~~yHT 295 (330)
T 4fai_A 217 FENTESWYMRIQSVETRLAKLQLLERYASSGVAQRDPTRYFQSQAMRSSFIEDDHIPFLR-RNVPILHLIPVPFPSVWHT 295 (330)
T ss_dssp CGGGHHHHHHHHHHHHHHHHTTC---------------CCEEEEEETTCCCCSTTHHHHT-TTCCEEEECCSSCCTTTTS
T ss_pred ccCcchHHHHHHHHHHHhhhhhhhhhhhccccccccccccccccCCCCCCCCCchHHHHH-CCCCEEEEECCCCCCCCCC
Confidence 333222211111 100 00 00000001111110 0112479999999 8999999987777889999
Q ss_pred CCCCcCCCCHhHHHHHHHHHHHHHHH
Q 005039 131 KNDRLDLLKPGSLQHLGENMLDFLLQ 156 (717)
Q Consensus 131 ~~Dt~d~i~~~slq~~g~~~l~lv~~ 156 (717)
+.||+|+||++++++++..+..++.+
T Consensus 296 ~~Dt~d~iD~~tl~~~~~ii~~Fv~E 321 (330)
T 4fai_A 296 PDDNASVIDYATTDNLALIIRLFALE 321 (330)
T ss_dssp TTSSGGGCCHHHHHHHHHHHHHHHHH
T ss_pred CcCChhhCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888877754
No 6
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=99.77 E-value=5.8e-19 Score=197.13 Aligned_cols=156 Identities=17% Similarity=0.148 Sum_probs=120.5
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCccchHHHHHhCCC-ccceeEEEEeccCCCCCcceEEEeCC-ChHHHHHHH
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPW-STTIRVAVDLEAMGIGGRSALFQAGP-NLWAVENFA 78 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp~-~~~i~a~INlD~~G~gG~~~lf~~g~-~~~L~~~y~ 78 (717)
|||+||+|++.+++|+|+|+|++|++||.|+.||++|+++|+. .+++.+++|+||.|.....+.++.++ ..++++.+.
T Consensus 277 ~le~a~~l~~~~~~~~~~i~f~~~~~EE~gl~Gs~~~~~~~~~~~~~~~~~~n~D~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (444)
T 3iib_A 277 VTAAAKHILDLPQKPERTIRVVLYAAEELGLLGGKTYAKEHEAELEKHYIAAESDFGAGPIYQIDWRVADTAHSPVINAM 356 (444)
T ss_dssp HHHHHHHHHTSSSCCSEEEEEEEESCGGGTSHHHHHHHHHTGGGGGGEEEEEECCSTTCCEEEEEEECCHHHHHHHHHHG
T ss_pred HHHHHHHHHhcCCCCCCeEEEEEECCcccCCcCHHHHHHhhHhhhhceeEEEECcCCCCcceEEEeecChhhHHHHHHHH
Confidence 5899999998778899999999999999999999999988854 36799999999965332222333222 345666665
Q ss_pred HhcCCCCCccccccccccCCCCCCCChHhhhhcCCCcEEEEeeeCC--CCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHH
Q 005039 79 AVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDK--SAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQ 156 (717)
Q Consensus 79 ~~a~~P~~~~~~~~~f~~g~ipsdTD~~~F~~~~GIPgLd~a~~~~--~~~YHT~~Dt~d~i~~~slq~~g~~~l~lv~~ 156 (717)
+.. .+.+... ......++|||.+|.+ .|||++++...+. ..+|||++||+|+++++.|+++++.+..+++.
T Consensus 357 ~~~-~~~g~~~-----~~~~~~~~SD~~~f~~-~GiP~~~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~~~~~~~~~v~~ 429 (444)
T 3iib_A 357 KVA-EPLGVAA-----GNNKASGGPDVSMLPA-LGVPVASLRQDGSDYFDYHHTPNDTLDKINPEALAQNVAVYAQFAWV 429 (444)
T ss_dssp GGG-GGGTCEE-----CCSCCCCCGGGTTSGG-GTCCEEEEEECCTTGGGTTTSTTCCGGGSCHHHHHHHHHHHHHHHHH
T ss_pred HHH-hhcCCcc-----ccCCCCCCCccHHHHH-CCCCEEEeecCCCcCCCCCCCCccccccCCHHHHHHHHHHHHHHHHH
Confidence 532 2332211 1122467899999998 8999999876432 24899999999999999999999999999999
Q ss_pred HhcCCCC
Q 005039 157 TASSTSI 163 (717)
Q Consensus 157 la~~~~l 163 (717)
+|++++.
T Consensus 430 lA~~~~~ 436 (444)
T 3iib_A 430 MANSKVE 436 (444)
T ss_dssp HHHCCCC
T ss_pred HhcCCCC
Confidence 9998764
No 7
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.75 E-value=1.7e-18 Score=185.07 Aligned_cols=149 Identities=18% Similarity=0.288 Sum_probs=99.4
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCc--------------cchHHHHHhCCC-ccceeEEEEeccCCCCCcceEE
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGL--------------NGAHSFVTQHPW-STTIRVAVDLEAMGIGGRSALF 65 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GL--------------lGS~~Fv~~hp~-~~~i~a~INlD~~G~gG~~~lf 65 (717)
|||+||+|++. +|+++|+|++|++||.|| +||++|+++++. .++++++||+||+|..++. ++
T Consensus 137 ~Le~ar~l~~~--~~~~~i~fv~~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlDm~G~~~~~-~~ 213 (314)
T 3gux_A 137 LLEIARQIQKE--QPALGIDIVFFDSEDYGIPEFYDGKYKQDTWCLGSQYWARTPHVQNYNARYGILLDMVGGKDAT-FY 213 (314)
T ss_dssp HHHHHHHHHHS--CCSSEEEEEEECSCCC-----------CTTSCHHHHHHHHSCSSTTCCCSEEEEEESCCBTTCC-EE
T ss_pred HHHHHHHHHhC--CCCCcEEEEEECCccccccccccccccccccchhHHHHHhCCcccccceeEEEEEeccCCCCCc-ee
Confidence 68999999874 489999999999999999 999999954333 3689999999999998765 45
Q ss_pred EeCC-C---hHHHHHHHHhcCC-CCCccccccccccCCCCCCCChHhhhhcCCCcEEEEeeeCC-------CCCCCCCCC
Q 005039 66 QAGP-N---LWAVENFAAVAKY-PSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDK-------SAVYHTKND 133 (717)
Q Consensus 66 ~~g~-~---~~L~~~y~~~a~~-P~~~~~~~~~f~~g~ipsdTD~~~F~~~~GIPgLd~a~~~~-------~~~YHT~~D 133 (717)
+.+. . +++.+.+.+.++. .+.... .+. +.|. ..+||.+|.+++|||+++++.... +++|||+.|
T Consensus 214 ~~g~~~~~~~~l~~~~~~~~~~~g~~~~f-~~~-~~~~--~~sDh~pF~~~~GiP~l~~i~~~~~~~~~~f~~~~Ht~~D 289 (314)
T 3gux_A 214 YEGYSARTARSEMKKIWKKAHELGYGKYF-VKE-DGGE--TVDDHIYVNKLARIPCVDIINYDAGNPQSSFGSFWHTVND 289 (314)
T ss_dssp ECTTHHHHCHHHHHHHHHHHHHHTCTTTE-EEE-ECCC--CCCHHHHHHHHSCCCEEEEEBCC-----------------
T ss_pred eeccccccHHHHHHHHHHHHHHcCCcccc-ccc-cCCC--CCCccHHHHhcCCCceEEEecccccccccCCCCCCCCCcC
Confidence 6554 2 4566666543221 111111 110 1122 247899999867999999976532 378999999
Q ss_pred CcCCCCHhHHHHHHHHHHHHHHH
Q 005039 134 RLDLLKPGSLQHLGENMLDFLLQ 156 (717)
Q Consensus 134 t~d~i~~~slq~~g~~~l~lv~~ 156 (717)
|+|+|++++||+.+++++.+++.
T Consensus 290 t~d~id~~~l~~~~~~~~~~~y~ 312 (314)
T 3gux_A 290 TMENIDRNTLKAVGQTVMDVIYN 312 (314)
T ss_dssp ---CBCHHHHHHHHHHHHHHHHT
T ss_pred cchhCCHHHHHHHHHHHHHHHhh
Confidence 99999999999999999998864
No 8
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.75 E-value=4.8e-18 Score=178.75 Aligned_cols=157 Identities=15% Similarity=0.164 Sum_probs=119.0
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCccchHHHHHhCCC--ccceeEEEEeccCCCCCcceEEEeCCChHHHHHHH
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPW--STTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFA 78 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp~--~~~i~a~INlD~~G~gG~~~lf~~g~~~~L~~~y~ 78 (717)
|||++|.|++.+.+++++|+|+|+++||.|+.||++|+++++. .++++++||+|+.|.++..+.+. +.++++.+.+.
T Consensus 105 ~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~~Gs~~~~~~~~~~~~~~~~~~i~~D~~g~~~~~~~~~-~~~~~l~~~~~ 183 (284)
T 1tkj_A 105 VLETALAVSRAGYQPDKHLRFAWWGAEELGLIGSKFYVNNLPSADRSKLAGYLNFDMIGSPNPGYFVY-DDDPVIEKTFK 183 (284)
T ss_dssp HHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHHHHHHHHHSCHHHHTTEEEEEEECCCCCSSCCCEEC-CSSHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCceEEEEEECCcccCCcCHHHHHhhCccchhhcEEEEEEecCCCCCCCCeEEe-cCCHHHHHHHH
Confidence 5899999998777899999999999999999999999988874 36899999999999876554443 34666665554
Q ss_pred HhcCCCCCccccccccccCCCCCCCChHhhhhcCCCcEEEEeeeC-------------------CCCCCCCCCCCcCCCC
Q 005039 79 AVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTD-------------------KSAVYHTKNDRLDLLK 139 (717)
Q Consensus 79 ~~a~~P~~~~~~~~~f~~g~ipsdTD~~~F~~~~GIPgLd~a~~~-------------------~~~~YHT~~Dt~d~i~ 139 (717)
+.+++ .+.. .+... ....+|||.+|.+ .|||++.+.... ...+|||+.|++|+++
T Consensus 184 ~~~~~-~gi~--~~~~~--~~~~~sD~~~f~~-~Gip~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~yHt~~D~~~~id 257 (284)
T 1tkj_A 184 NYFAG-LNVP--TEIET--EGDGRSDHAPFKN-VGVPVGGLFTGAGYTKSAAQAQKWGGTAGQAFDRCYHSSCDSLSNIN 257 (284)
T ss_dssp HHHHH-HTCC--CEECC--SSTTCSTHHHHHH-TTCCEEEEECCCSSBCCHHHHHHHCSCTTSBSCTTTTSTTCSTTSCC
T ss_pred HHHHH-cCCC--cccCC--CCCCCCchHHHHH-CCCCEEEeecCcccccccchhhccccccccCCCCCCCCCcCChhhCC
Confidence 43221 0100 01111 1235799999998 999999987541 1468999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHhcCCCCC
Q 005039 140 PGSLQHLGENMLDFLLQTASSTSIP 164 (717)
Q Consensus 140 ~~slq~~g~~~l~lv~~la~~~~l~ 164 (717)
++.++++++.+..+++.|++++++|
T Consensus 258 ~~~l~~~~~~~~~~~~~la~~~~~P 282 (284)
T 1tkj_A 258 DTALDRNSDAAAHAIWTLSSGTGEP 282 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 9999999999999999999998876
No 9
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=99.75 E-value=1.5e-18 Score=185.18 Aligned_cols=147 Identities=18% Similarity=0.250 Sum_probs=110.6
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCc-------------cchHHHHHhCCC-ccceeEEEEeccCCCCCcceEEE
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGL-------------NGAHSFVTQHPW-STTIRVAVDLEAMGIGGRSALFQ 66 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GL-------------lGS~~Fv~~hp~-~~~i~a~INlD~~G~gG~~~lf~ 66 (717)
|||+||+|++. +|+++|+|++|++||.|| +||++|+++++. .++++++||+||+|.+++.+...
T Consensus 135 ~Le~ar~l~~~--~~~~~i~f~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlD~~G~~~~~~~~~ 212 (309)
T 3tc8_A 135 LLEIARQIGQK--APGIGIDIIFFDAEDYGTPEFVTDYTPDSWCLGTQFWAKNPHVPNYTAEYGILLDMVGGKNATFFKE 212 (309)
T ss_dssp HHHHHHHHHHS--CCSSEEEEEEECSCSCSCCTTCCSCCTTCSCHHHHHHHHSCSSTTCCCSEEEEEESCCBTTCCEEEC
T ss_pred HHHHHHHHHhC--CCCCcEEEEEECccccccccccccccccccchhHHHHHhCCCccccceEEEEEecccCCCCCceeec
Confidence 68999999874 489999999999999999 999999954433 36899999999999987654322
Q ss_pred eCC-C---hHHHHHHHHhcCCCCCccccccccc---cCCCCCCCChHhhhhcCCCcEEEEeee------CCCCCCCCCCC
Q 005039 67 AGP-N---LWAVENFAAVAKYPSGQIIGQDLFA---SGVFETATDFQVYTEVAGLSGLDFAYT------DKSAVYHTKND 133 (717)
Q Consensus 67 ~g~-~---~~L~~~y~~~a~~P~~~~~~~~~f~---~g~ipsdTD~~~F~~~~GIPgLd~a~~------~~~~~YHT~~D 133 (717)
+. . +++++.+.+.++ ..+. ...|+ .|.+ .+||.+|.++.|||+++++.. ..+++|||+.|
T Consensus 213 -~~~~~~~~~l~~~~~~~a~-~~g~---~~~f~~~~~g~~--~sDh~~f~~~~GiP~~~li~~~~~~~~~~~~~~Ht~~D 285 (309)
T 3tc8_A 213 -QQSLRAAAPIVEMVWSAAR-DLGY---GKYFINAAGGAI--TDDHQYVISGRNIPSIDIINYDPESKTGFASYWHTQKD 285 (309)
T ss_dssp -HHHHHHHHHHHHHHHHHHH-HHTC---TTTEEEEECCCC--CCHHHHHHHHHCCCEEEEEBCCTTSSSSSCTTTTSTTC
T ss_pred -ccccchHHHHHHHHHHHHH-HcCC---cceeccCCCCCC--CCccHHHHhcCCCCEEEEecccCcccCCCCCCCCCCcC
Confidence 22 2 345555544322 1110 11122 1222 478999998779999999765 33589999999
Q ss_pred CcCCCCHhHHHHHHHHHHHHHHH
Q 005039 134 RLDLLKPGSLQHLGENMLDFLLQ 156 (717)
Q Consensus 134 t~d~i~~~slq~~g~~~l~lv~~ 156 (717)
|+|+|+++++|+.+++++++++.
T Consensus 286 t~d~id~~~l~~~~~~~~~~vy~ 308 (309)
T 3tc8_A 286 NMENIDRETLKAAGQTVLEVIYN 308 (309)
T ss_dssp SGGGBCHHHHHHHHHHHHHHHHH
T ss_pred ChhhCCHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999874
No 10
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=99.73 E-value=6.2e-18 Score=181.78 Aligned_cols=153 Identities=21% Similarity=0.236 Sum_probs=109.8
Q ss_pred ChHHHHHHhcC-----CCCCCceEEEEecCcccc--------CccchHHHHHh-----CC----CccceeEEEEeccCCC
Q 005039 1 MLELARVMSQW-----AHEFKNAVIFLFNTGEEE--------GLNGAHSFVTQ-----HP----WSTTIRVAVDLEAMGI 58 (717)
Q Consensus 1 mLElaR~l~~~-----~~~p~rtIiFlf~~aEE~--------GLlGS~~Fv~~-----hp----~~~~i~a~INlD~~G~ 58 (717)
|||+||+|++. +.+|+|+|+|+||+|||. ||+||++|+++ || ..++|+++||+||+|+
T Consensus 142 lLe~ar~l~~~~~~~~~~~~~~~i~fv~~~~EE~f~~w~~~~gl~GS~~~a~~~~~~~~~~~~~~~~~i~~~inlDmiG~ 221 (330)
T 3pb6_X 142 LLELAQALDLELSRAKKQAAPVTLQLLFLDGEEALKEWGPKDSLYGSRHLAQLMESIPHSPGPTRIQAIELFMLLDLLGA 221 (330)
T ss_dssp HHHHHHHTHHHHHHHHHTTCSEEEEEEEESCCSCSSCCSTTSSCHHHHHHHHHHHHSBCSSCSBTTTTEEEEEEEESCSS
T ss_pred HHHHHHHHHHHHhhcccCCCCCcEEEEEEcCcccccccCCCCCCccHHHHHHHHHhcCCccccchhhCeEEEEeccCCCC
Confidence 69999999863 368999999999999999 99999999965 22 3579999999999999
Q ss_pred CCcceEEEeCCChHHHHHH-------HHhc---CCCCCccccccccccCCCCCCCChHhhhhcCCCcEEEEeeeCCCCCC
Q 005039 59 GGRSALFQAGPNLWAVENF-------AAVA---KYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVY 128 (717)
Q Consensus 59 gG~~~lf~~g~~~~L~~~y-------~~~a---~~P~~~~~~~~~f~~g~ipsdTD~~~F~~~~GIPgLd~a~~~~~~~Y 128 (717)
.++.+....+...++.+.+ .+.. .+|............| ...+||.+|.+ .|||++++.......+|
T Consensus 222 ~~~~~~~~~~~t~~~~~~l~~i~~~~~~~g~~~~~p~~~~~f~~~~~~~--~~~SDH~pF~~-~GIP~~~~~~~~f~~~y 298 (330)
T 3pb6_X 222 PNPTFYSHFPRTVRWFHRLRSIEKRLHRLNLLQSHPQEVMYFQPGEPFG--SVEDDHIPFLR-RGVPVLHLISTPFPAVW 298 (330)
T ss_dssp SSCCBCCCCGGGHHHHHHHHHHHHHHHHTTCCSSCCSSCSSBCSSCSSC--CCSCTTHHHHT-TTCCEEEEECSSCCTTT
T ss_pred CCCCceeecCcchHHHHHHHHHHHHHHHcCccccCCcccccccccccCC--CCCCchHhHHH-CCCCEEEEEcCCCCCCC
Confidence 8766421111122222222 1110 1222111110001112 24579999999 99999999766656799
Q ss_pred CCCCCCcCCCCHhHHHHHHHHHHHHHHH
Q 005039 129 HTKNDRLDLLKPGSLQHLGENMLDFLLQ 156 (717)
Q Consensus 129 HT~~Dt~d~i~~~slq~~g~~~l~lv~~ 156 (717)
||+.||+|+||++.+++.++.+..++.+
T Consensus 299 Ht~~Dt~d~id~~~l~~~~~i~~~fv~E 326 (330)
T 3pb6_X 299 HTPADTEVNLHPPTVHNLCRILAVFLAE 326 (330)
T ss_dssp TSTTCSGGGSCHHHHHHHHHHHHHHHHH
T ss_pred CCCcCchhhCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999888765
No 11
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=99.73 E-value=1.3e-17 Score=184.75 Aligned_cols=153 Identities=20% Similarity=0.216 Sum_probs=117.5
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCccchHHHHHhCC--CccceeEEEEeccCCCCCc-ceEEEeCC-ChHHHHH
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHP--WSTTIRVAVDLEAMGIGGR-SALFQAGP-NLWAVEN 76 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp--~~~~i~a~INlD~~G~gG~-~~lf~~g~-~~~L~~~ 76 (717)
|||++|.|++ .+++|+|+|++|++||.|+.||++|+++|+ +.+++.++||+||+|.++. ......+. .+.+...
T Consensus 248 ~le~~~~l~~--~~~~~~i~~~~~~~EE~g~~Gs~~~~~~~~~~~~~~~~~~in~D~~g~~~~~~~~~~~~~g~~~~~~~ 325 (421)
T 2ek8_A 248 TLELARVMSK--LKTDTELRFITFGAEENGLIGSKKYAASLSEDEIKRTIGMFQLDMVGSKDAGDLIMYTIDGKKNRVTD 325 (421)
T ss_dssp HHHHHHHHTT--SCCSSEEEEEEESSSTTTSHHHHHHHTTCCHHHHHHEEEEEEECSCCBTTSCEEEEEETTSCCCHHHH
T ss_pred HHHHHHHHhc--cCCCceEEEEEECCccccchhHHHHHHhCccchhhcEEEEEEecccCCCCCcceEEecCCCccccchh
Confidence 6899999986 467899999999999999999999998775 3578999999999998776 33333332 2222222
Q ss_pred HH----HhcCCCCCccccccccccCCCCCCCChHhhhhcCCCcEEEEeeeCCCCCCCCCCCCcCCCCHhHHHHHHHHHHH
Q 005039 77 FA----AVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLD 152 (717)
Q Consensus 77 y~----~~a~~P~~~~~~~~~f~~g~ipsdTD~~~F~~~~GIPgLd~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~~l~ 152 (717)
+. +....| . .. ...++|||.+|.+ .|||++.+.......+|||++||+|+++++.++++++.+..
T Consensus 326 ~~~~~~~~~~~~--~---~~-----~~~~~SD~~~F~~-~GIP~~~~~~~~~~~~yHt~~Dt~~~i~~~~l~~~~~~~~~ 394 (421)
T 2ek8_A 326 LGAAASSRLSGV--L---PY-----GQEGRSDHESFHA-LGIPAALFIHAPVEPWYHTPNDTLDKISKEKLDNVADIVGS 394 (421)
T ss_dssp HHHHHHHHHTSC--C---CE-----EECCSSTHHHHHT-TTCCEEEEEEESCCTTTTSTTCCGGGBCHHHHHHHHHHHHH
T ss_pred hHHHHHHhcCCC--C---CC-----CCCCCCccHHHHH-CCCCEEEEECCcCCCCCCCcccchhhCCHHHHHHHHHHHHH
Confidence 21 111112 0 01 1245789999998 99999977644445789999999999999999999999999
Q ss_pred HHHHHhcCCCCCCC
Q 005039 153 FLLQTASSTSIPKG 166 (717)
Q Consensus 153 lv~~la~~~~l~~~ 166 (717)
+++.+++++.+|.+
T Consensus 395 ~~~~la~~~~~p~~ 408 (421)
T 2ek8_A 395 AVYQAARPGELVIE 408 (421)
T ss_dssp HHHHHHSSSCCCCC
T ss_pred HHHHHhCCCccCCC
Confidence 99999999988864
No 12
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.69 E-value=5.2e-17 Score=174.50 Aligned_cols=156 Identities=19% Similarity=0.206 Sum_probs=106.6
Q ss_pred ChHHHHHHhcC--------CCCCCceEEEEecCcccc--------CccchHHHHHhC---C---------CccceeEEEE
Q 005039 1 MLELARVMSQW--------AHEFKNAVIFLFNTGEEE--------GLNGAHSFVTQH---P---------WSTTIRVAVD 52 (717)
Q Consensus 1 mLElaR~l~~~--------~~~p~rtIiFlf~~aEE~--------GLlGS~~Fv~~h---p---------~~~~i~a~IN 52 (717)
|||+||.|++. +.+|+++|+|++|++||. |+.||++|++++ | ..+++.++||
T Consensus 135 ~le~ar~l~~~~~~~~~~~g~~~~~~i~~~~~~~EE~~~~~~~~~gl~Gs~~~~~~~~~~~~p~~~~~~~~~~~i~~~in 214 (329)
T 2afw_A 135 MLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVL 214 (329)
T ss_dssp HHHHHHHTHHHHHTTC------CCEEEEEEEESCCSCSSSCCSSSSCHHHHHHHHHHHTSBSSTTCSSCBTTTTEEEEEE
T ss_pred HHHHHHHHHHHHhhhcccccCCCCccEEEEEecCcccccccCCCccchhHHHHHHHHHhCCCcccccccccccceEEEEE
Confidence 68999999864 257899999999999998 999999999764 1 2467999999
Q ss_pred eccCCCCCcceEEEeCCChHHHHH---HHHhcCCC-C--CccccccccccCC--CCCCCChHhhhhcCCCcEEEEeeeCC
Q 005039 53 LEAMGIGGRSALFQAGPNLWAVEN---FAAVAKYP-S--GQIIGQDLFASGV--FETATDFQVYTEVAGLSGLDFAYTDK 124 (717)
Q Consensus 53 lD~~G~gG~~~lf~~g~~~~L~~~---y~~~a~~P-~--~~~~~~~~f~~g~--ipsdTD~~~F~~~~GIPgLd~a~~~~ 124 (717)
+||+|.++.......+....+.+. ..+..+.. . ........|+... -...+||.+|.+ .|||++++.....
T Consensus 215 lD~iG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~f~~~~~~g~~~sDh~~F~~-~GiP~~~~~~~~~ 293 (329)
T 2afw_A 215 LDLIGAPNPTFPNFFPNSARWFERLQAIEHELHELGLLKDHSLEGRYFQNYSYGGVIQDDHIPFLR-RGVPVLHLIPSPF 293 (329)
T ss_dssp ECSCCSSSCCBCCCCGGGHHHHHHHHHHHHHHHHTTCSSSCCSTTCSBCSCCCCSCCCSTTHHHHT-TTCCEEEECCSSC
T ss_pred eccCCCCCCceeeeccCcchHHHHHHHHHHHHHHcCCccCCCcccccccccccCCCCCCCCHhHHH-CCCCEEEEEcCCC
Confidence 999998766432111111222211 11111000 0 0001111232111 123589999999 7999999987666
Q ss_pred CCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHHH
Q 005039 125 SAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQT 157 (717)
Q Consensus 125 ~~~YHT~~Dt~d~i~~~slq~~g~~~l~lv~~l 157 (717)
.+.|||++||+|+++++.++++++.+..++.+.
T Consensus 294 ~~~yHt~~Dt~~~ld~~~l~~~~~~~~~~v~ey 326 (329)
T 2afw_A 294 PEVWHTMDDNEENLDESTIDNLNKILQVFVLEY 326 (329)
T ss_dssp CTTTTSTTCSSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCchhhCCHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999888776653
No 13
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.65 E-value=4.2e-16 Score=164.98 Aligned_cols=158 Identities=20% Similarity=0.263 Sum_probs=116.7
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCccchHHHHHhCCC-ccceeEEEEeccCCCCC--cceEEEeCC-ChHHHHH
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPW-STTIRVAVDLEAMGIGG--RSALFQAGP-NLWAVEN 76 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp~-~~~i~a~INlD~~G~gG--~~~lf~~g~-~~~L~~~ 76 (717)
|||++|.|++.+.+++++|+|+++++||.|+.||++|+++++. .+++.++||+||.|..| +.+.+.... ++.+.+.
T Consensus 125 ~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~~Gs~~~~~~~~~~~~~~~~~i~~D~~g~~g~~~~i~~~~~~~~~~l~~~ 204 (299)
T 1rtq_A 125 VTEVIRVLSENNFQPKRSIAFMAYAAEEVGLRGSQDLANQYKSEGKNVVSALQLDMTNYKGSAQDVVFITDYTDSNFTQY 204 (299)
T ss_dssp HHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHHHHHHHHHHHHTTCEEEEEEECSCCSCCCSSSSEEEECTTSCHHHHHH
T ss_pred HHHHHHHHHHcCCCCCceEEEEEECCccCCchhHHHHHHhhhhccccEEEEEEecCCCCCCCCcceEEEeCCCCchHHHH
Confidence 5899999998777899999999999999999999999987754 46899999999998643 345555433 5555443
Q ss_pred HHHhcC--CCCCccccccccccCCCCCCCChHhhhhcCCCcEEEEee---eCCCCCCCCCCCCcCCCCH--hHHHHHHHH
Q 005039 77 FAAVAK--YPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAY---TDKSAVYHTKNDRLDLLKP--GSLQHLGEN 149 (717)
Q Consensus 77 y~~~a~--~P~~~~~~~~~f~~g~ipsdTD~~~F~~~~GIPgLd~a~---~~~~~~YHT~~Dt~d~i~~--~slq~~g~~ 149 (717)
..+.++ .|. +... +... ...+|||.+|.+ .|||++.+.. .+...+|||+.|+++++|+ ..++++++.
T Consensus 205 l~~~a~~~~~~---i~~~-~~~~-~~~~sD~~~f~~-~GiP~~~~~~~~~~~~~~~yHt~~Dt~~~~d~~~~~~~~~~~l 278 (299)
T 1rtq_A 205 LTQLMDEYLPS---LTYG-FDTC-GYACSDHASWHN-AGYPAAMPFESKFNDYNPRIHTTQDTLANSDPTGSHAKKFTQL 278 (299)
T ss_dssp HHHHHHHHCTT---CCEE-EECC-SSCCSTHHHHHH-TTCCEECEESSCGGGSCTTTTSTTCCGGGSCTTCHHHHHHHHH
T ss_pred HHHHHHHhCcc---CCcc-cCCC-CCCCCcHHHHHH-CCCCEEEecccccccCCCCCCCccccccccCccHHHHHHHHHH
Confidence 332211 111 1111 1111 135789999998 9999987632 2234789999999999998 588999999
Q ss_pred HHHHHHHHhcCCCCC
Q 005039 150 MLDFLLQTASSTSIP 164 (717)
Q Consensus 150 ~l~lv~~la~~~~l~ 164 (717)
+..+++.|++++.+.
T Consensus 279 ~~~~~~~La~~~~~~ 293 (299)
T 1rtq_A 279 GLAYAIEMGSATGDT 293 (299)
T ss_dssp HHHHHHHHHHCCC--
T ss_pred HHHHHHHHhCCCcCC
Confidence 999999999987653
No 14
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=99.51 E-value=4e-14 Score=154.19 Aligned_cols=148 Identities=17% Similarity=0.198 Sum_probs=111.0
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCccchHHHHHhCCC-ccceeEEEEeccCCCCCcceEEEeCC-ChHHHHHHH
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPW-STTIRVAVDLEAMGIGGRSALFQAGP-NLWAVENFA 78 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp~-~~~i~a~INlD~~G~gG~~~lf~~g~-~~~L~~~y~ 78 (717)
++|+||+|++ .+++++++|+|++ |..||.+|+++|+. .+++++.+|+||+|.++. ..+..+. .+++++...
T Consensus 204 lleLar~l~~--~~~~~t~rFvf~p----g~iGS~~yl~~~~~~l~~i~a~lnLDmVGd~~~-~~y~~sr~g~~~~d~~~ 276 (435)
T 3k9t_A 204 ITFIAKALSK--LKTKYSYRFLFAP----ETIGSITWLSRNEDKLKNIKMGLVATCVGDAGI-KNYKRTKFGDAEIDKIV 276 (435)
T ss_dssp HHHHHHHHTT--SCCSSEEEEEEEC----TTHHHHHHHHHCGGGGGGEEEEEECCSCCSSSC-EEEECCTTSSSHHHHHH
T ss_pred HHHHHHHHhc--CCCCceEEEEEcC----ccHHHHHHHHhChHhhhceEEEEEEEEecCCCC-ceeecCCCCChHHHHHH
Confidence 4899999985 5689999999998 79999999999874 479999999999999764 4455333 333433322
Q ss_pred -HhcCCCCCccccccccccCCCCCCCChHhhhhcCC--CcEEEEeeeCC-CCCCCCCCCCcCCCCHhHHHHHHHHHHHHH
Q 005039 79 -AVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAG--LSGLDFAYTDK-SAVYHTKNDRLDLLKPGSLQHLGENMLDFL 154 (717)
Q Consensus 79 -~~a~~P~~~~~~~~~f~~g~ipsdTD~~~F~~~~G--IPgLd~a~~~~-~~~YHT~~Dt~d~i~~~slq~~g~~~l~lv 154 (717)
.+.++. +.......| .+.++||++|.+ .| ||...+..... ...|||+.||+|+|++++|+...+.++.++
T Consensus 277 ~~vl~~~-~~~~~~~~f----~~~GSDh~qF~s-pG~dIPv~~~~r~~~~~peYHTs~Dtld~ISpe~L~~s~~iv~~~i 350 (435)
T 3k9t_A 277 EKVLMHC-GSEYYVADF----FPWGSDERQFSS-PGINLSVGSLMRSCYGFDGYHTSADNLCYMNKDGLADSYKTYLEVI 350 (435)
T ss_dssp HHHHHHS-SSCEEEECC----CSCSSTHHHHTS-TTTCCCEEEEESSCTTCTTTTBTTSSGGGCCHHHHHHHHHHHHHHH
T ss_pred HHHHhhc-CCCCceecC----CCCCCcchhHhh-CCCCCCEEEEecCCCCCcccCCCcCChhhCCHHHHHHHHHHHHHHH
Confidence 222220 000111112 346789999999 88 99999876432 468999999999999999999999999999
Q ss_pred HHHhcCC
Q 005039 155 LQTASST 161 (717)
Q Consensus 155 ~~la~~~ 161 (717)
..|-+..
T Consensus 351 ~~Le~n~ 357 (435)
T 3k9t_A 351 YTIENNR 357 (435)
T ss_dssp HHHHHCC
T ss_pred HHhhccc
Confidence 9998754
No 15
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=98.25 E-value=2.1e-06 Score=91.48 Aligned_cols=137 Identities=19% Similarity=0.236 Sum_probs=93.6
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCccchHHHHHhCCCccceeEEEEeccCCCC-----------CcceEEE-eC
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIG-----------GRSALFQ-AG 68 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp~~~~i~a~INlD~~G~g-----------G~~~lf~-~g 68 (717)
|||++|.+++. +++++|.|+|++.||.|+.||++++++ .+..++||+|+.+.+ |..+.+. .+
T Consensus 181 ~l~a~~~l~~~--~~~~~i~~~~~~~EE~G~~G~~~~~~~----~~~~~~i~~d~~~~~~~p~~~~~lg~G~~i~~~d~~ 254 (332)
T 2wyr_A 181 LIEAIKDLVDH--ELEGKVIFAFTVQEEVGLKGAKFLANH----YYPQYAFAIDSFACCSPLTGDVKLGKGPVIRAVDNS 254 (332)
T ss_dssp HHHHHHTTTTS--CCSSEEEEEEESCGGGTSHHHHHHTTT----CCCSEEEEECCEECCSGGGTTCCTTSCCEEEEECSS
T ss_pred HHHHHHHHhhc--CCCceEEEEEECccccCcchHHHHhcc----cCCCEEEEEecccccCCCCCceeeCCCCEEEEcCCC
Confidence 47888888753 367999999999999999999999732 245689999987653 2222221 11
Q ss_pred --CChHHHHHHHHhcCCCCCccccccccccCCCCCCCChHhhhhcCCCcEEEEeeeCCCCCCCCCCCCcCCCCHhHHHHH
Q 005039 69 --PNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHL 146 (717)
Q Consensus 69 --~~~~L~~~y~~~a~~P~~~~~~~~~f~~g~ipsdTD~~~F~~~~GIPgLd~a~~~~~~~YHT~~Dt~d~i~~~slq~~ 146 (717)
.++.+.+...++++.- +... +....+.+||...|.. |+|.+++.-- ...+||+. |+++.+.+++.
T Consensus 255 ~~~~~~l~~~l~~~~~~~-gi~~-----~~~~~~ggtDa~~~~~--GiPtv~lg~~--~~~~Hs~~---E~v~~~dl~~~ 321 (332)
T 2wyr_A 255 AIYSRDLARKVWSIAEKN-GIEI-----QIGVTGGGTDASAFQD--RSKTLALSVP--IKYLHSEV---ETLHLNDLEKL 321 (332)
T ss_dssp CBCCHHHHHHHHHHHHHT-TCCC-----EEEECSSCCGGGGGTT--TSEEEEEECE--EBSCSSTT---CEEEHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHc-CCCe-----EEecCCCCchHHHHHc--CCCEEEEcCC--cCCCCChh---hcccHHHHHHH
Confidence 2566776665543211 1111 1111357899999987 9999987532 24589975 67778999998
Q ss_pred HHHHHHHHHH
Q 005039 147 GENMLDFLLQ 156 (717)
Q Consensus 147 g~~~l~lv~~ 156 (717)
.+.+..++..
T Consensus 322 ~~ll~~~~~~ 331 (332)
T 2wyr_A 322 VKLIEALAFE 331 (332)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 8888877764
No 16
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=98.14 E-value=5.5e-06 Score=85.82 Aligned_cols=143 Identities=15% Similarity=0.118 Sum_probs=95.6
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCcc-chHHHHHhCC-CccceeEEEEeccCCCC-----------CcceEEEe
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGLN-GAHSFVTQHP-WSTTIRVAVDLEAMGIG-----------GRSALFQA 67 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GLl-GS~~Fv~~hp-~~~~i~a~INlD~~G~g-----------G~~~lf~~ 67 (717)
||+++|.|.+.+.+++++|+|+|+.+||.|.. ||+.++++.. ...+..++|+.|..+.. |.. +.+
T Consensus 111 ~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~~Ept~~~~~~~~i~~g~~G~G--~~~ 188 (269)
T 4h2k_A 111 MIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRGGG--FLT 188 (269)
T ss_dssp HHHHHHHHHHHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHTTCCCCEEEECCCCBSSSTTSEEECSCTTCC-----
T ss_pred HHHHHHHHHHhCCCCCccEEEEEEeccccCcccCHHHHHHHHHhcCCCCCEEEEECCCCCCcCCceeEEeccccc--ccC
Confidence 57889999876667889999999999999985 9999986532 13467899999876431 211 221
Q ss_pred CCChHHHHHHHHhcCC--CCCccccccccccCCCCCCCChHhhhhcCCCcEEEEeeeCCCCCCCCCCCCcCCCCHhHHHH
Q 005039 68 GPNLWAVENFAAVAKY--PSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQH 145 (717)
Q Consensus 68 g~~~~L~~~y~~~a~~--P~~~~~~~~~f~~g~ipsdTD~~~F~~~~GIPgLd~a~~~~~~~YHT~~Dt~d~i~~~slq~ 145 (717)
.+..+++...++++. ... .... ..+.+||.+.+.+ .|+|.+.+.... ..+||+.+ +++.+.+++
T Consensus 189 -~~~~l~~~l~~aa~~~~gi~----~~~~---~~gggtDa~~~~~-~g~p~~~~~~~~--~~~Hs~~E---~v~~~d~~~ 254 (269)
T 4h2k_A 189 -KPGKLLDSITSAIEETIGIT----PKAE---TGGGTSDGRFIAL-MGAEVVEFGPLN--STIHKVNE---CVSVEDLGK 254 (269)
T ss_dssp ----HHHHHHHHHHHHHHSCC----CEEE---CC--CHHHHHHHT-TTCEEEECCSBC--TTTTSTTC---EEEHHHHHH
T ss_pred -CCcHHHHHHHHHHHHHhCCC----CEEe---cCCCCchHHHHHh-hCCCEEEEEeCC--CCCcCCcc---cccHHHHHH
Confidence 123455555443221 111 0111 1246899999987 899999875433 45599984 788999999
Q ss_pred HHHHHHHHHHHHhc
Q 005039 146 LGENMLDFLLQTAS 159 (717)
Q Consensus 146 ~g~~~l~lv~~la~ 159 (717)
..+.+..+++.+.+
T Consensus 255 ~~~ll~~~l~~l~~ 268 (269)
T 4h2k_A 255 CGEIYHKMLVNLLD 268 (269)
T ss_dssp HHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999888764
No 17
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=98.13 E-value=3.9e-06 Score=86.85 Aligned_cols=148 Identities=16% Similarity=0.126 Sum_probs=98.6
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCc-cchHHHHHhCC-CccceeEEEEeccCCCC--CcceEE-EeC-----CC
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGL-NGAHSFVTQHP-WSTTIRVAVDLEAMGIG--GRSALF-QAG-----PN 70 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GL-lGS~~Fv~~hp-~~~~i~a~INlD~~G~g--G~~~lf-~~g-----~~ 70 (717)
||+++|.|.+.+.+++++|+|+|+.+||.|. .||+.+++++. ...+..++|+.|..+.. |..+.. +.| ++
T Consensus 111 ~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~~ept~~~~~~~~i~~g~~G~p~~~~~ 190 (268)
T 3t68_A 111 MIVAVERFIAEHPDHQGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKNGRRGGGFLTDT 190 (268)
T ss_dssp HHHHHHHHHHHCTTCSSEEEEEEESCTTSSSCCHHHHHHHHHHHTTCCCCEEEECSCCBSSSTTSEEEECCGGGGTSCCC
T ss_pred HHHHHHHHHHhCCCCCCcEEEEEEeCCccCcccCHHHHHHHHHhcCCCCCEEEEeCCCCCccCCceeEEecCCCcccCCc
Confidence 5788999887666788999999999999998 49999996532 23567899999976532 111111 011 12
Q ss_pred hHHHHHHHHhcCCCCCccccccccccCCCCCCCChHhhhhcCCCcEEEEeeeCCCCCCCCCCCCcCCCCHhHHHHHHHHH
Q 005039 71 LWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENM 150 (717)
Q Consensus 71 ~~L~~~y~~~a~~P~~~~~~~~~f~~g~ipsdTD~~~F~~~~GIPgLd~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~~ 150 (717)
..+.+...++++.-.+... + .- ..+.+||...|.+ .|+|++.+.. +...+||+.+ +++.+.+++..+.+
T Consensus 191 ~~l~~~l~~a~~~~~gi~~-~-~~---~sgggtD~~~~~~-~g~p~~~~~~--~~~~~Hs~~E---~v~~~d~~~~~~vl 259 (268)
T 3t68_A 191 GELLAAVVAAVEEVNHQAP-A-LL---TTGGTSDGRFIAQ-MGAQVVELGP--VNATIHKVNE---CVRIADLEKLTDMY 259 (268)
T ss_dssp CHHHHHHHHHHHHHHSSCC-E-EE---SSCCCHHHHHHHH-HTCEEEECCS--BCTTTTSTTC---EEEHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCc-E-Ee---cCccccHHHHHHh-cCCCEEEEee--CCCCCCCccc---cccHHHHHHHHHHH
Confidence 3355555543221001000 1 11 1245899999998 8999987643 2345699985 67889999999999
Q ss_pred HHHHHHHhc
Q 005039 151 LDFLLQTAS 159 (717)
Q Consensus 151 l~lv~~la~ 159 (717)
..+++.+.+
T Consensus 260 ~~~l~~l~~ 268 (268)
T 3t68_A 260 QKTLNHLLG 268 (268)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999888764
No 18
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=98.10 E-value=8.9e-06 Score=87.51 Aligned_cols=141 Identities=16% Similarity=0.130 Sum_probs=95.8
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCccchHHHHHhCCCccceeEEEEeccCCCCC----------------cceE
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGG----------------RSAL 64 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp~~~~i~a~INlD~~G~gG----------------~~~l 64 (717)
|||++|.+++ ++++|+|+|++.||.|+.||+++... .+..++|++|+.+.++ ..+.
T Consensus 190 ~l~a~~~l~~----~~~~i~~~~~~~EE~g~~G~~~~~~~----~~~~~~i~~d~~~~~~~p~~~~~~g~~~lg~G~~i~ 261 (353)
T 1y0y_A 190 ILEVAKQLKD----AKADVYFVATVQEEVGLRGARTSAFG----IEPDYGFAIDVTIAADIPGTPEHKQVTHLGKGTAIK 261 (353)
T ss_dssp HHHHHHHCCS----CSSEEEEEEESCCTTTSHHHHHHHHH----HCCSEEEEEEEEECCCSTTCCGGGCCCCTTSCEEEE
T ss_pred HHHHHHHhhc----CCCeEEEEEECCcccchhHHHHHhhc----cCCCEEEEEecccccCCCCCccccCccccCCCcEEE
Confidence 4778888763 68999999999999999999999742 2356889999876531 1121
Q ss_pred EE---eCCChHHHHHHHHhcCCCCCccccccccccCCCCCCCChHhhhh-cCCCcEEEEeeeCCCCCCCCCCCCcCCCCH
Q 005039 65 FQ---AGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKP 140 (717)
Q Consensus 65 f~---~g~~~~L~~~y~~~a~~P~~~~~~~~~f~~g~ipsdTD~~~F~~-~~GIPgLd~a~~~~~~~YHT~~Dt~d~i~~ 140 (717)
+. ...++.+.+..+++++.- +.....+.. .+.+||...|.. ..|+|.+++..- . ..+||+. |+++.
T Consensus 262 ~~d~~~~~~~~l~~~l~~~a~~~-gi~~~~~~~----~~ggsDa~~~~~~~~GiPtv~lg~~-~-~~~Hs~~---E~v~~ 331 (353)
T 1y0y_A 262 IMDRSVICHPTIVRWLEELAKKH-EIPYQLEIL----LGGGTDAGAIHLTKAGVPTGALSVP-A-RYIHSNT---EVVDE 331 (353)
T ss_dssp EEETTEECCHHHHHHHHHHHHHT-TCCEEEEEC----SSCCCTHHHHTTSTTCCCEEEEEEE-E-BSCSSSC---EEEEH
T ss_pred EeCCCCCCCHHHHHHHHHHHHHc-CCCEEEeec----CCCCchHHHHHHhCCCCcEEEEccc-c-cccCCHH---HhcCH
Confidence 11 112566776665543211 111111111 356899999942 279999997643 2 3589985 67789
Q ss_pred hHHHHHHHHHHHHHHHHhc
Q 005039 141 GSLQHLGENMLDFLLQTAS 159 (717)
Q Consensus 141 ~slq~~g~~~l~lv~~la~ 159 (717)
+.+.+..+.+..++..+++
T Consensus 332 ~dl~~~~~ll~~~l~~l~~ 350 (353)
T 1y0y_A 332 RDVDATVELMTKALENIHE 350 (353)
T ss_dssp HHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHhhhh
Confidence 9999999999999998875
No 19
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=98.06 E-value=9.8e-06 Score=87.97 Aligned_cols=143 Identities=17% Similarity=0.172 Sum_probs=97.3
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCccchHHHHHhCCCccceeEEEEeccCCCC----------------CcceE
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIG----------------GRSAL 64 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp~~~~i~a~INlD~~G~g----------------G~~~l 64 (717)
||+++|.+++. +++++|+|+|++.||.|+.||+++.... +..++|++|+.+.+ |..+.
T Consensus 192 ~l~a~~~l~~~--~~~~~v~~~~~~~EE~G~~G~~~~~~~~----~~d~~i~~d~~~~~~~~g~~~~~~~~~lg~G~~i~ 265 (373)
T 1vhe_A 192 AIDVLRNLQNT--DHPNIVYGVGTVQEEVGLRGAKTAAHTI----QPDIAFGVDVGIAGDTPGISEKEAQSKMGKGPQII 265 (373)
T ss_dssp HHHHHHHHHTS--CCSSEEEEEEESCCTTTSHHHHHHHHHH----CCSEEEEEEEEECCCSTTCCTTTCCCCTTSCCEEE
T ss_pred HHHHHHHHhhc--CCCceEEEEEECCcccChhhHHHHhccc----CCCEEEEEeccccCCCCCCcccccccccCCCceEE
Confidence 57899999863 3679999999999999999999986422 34678899887643 22222
Q ss_pred EEeC---CChHHHHHHHHhcCCCCCccccccccccCCCCCCCChHhh--hhcCCCcEEEEeeeCCCCCCCCCCCCcCCCC
Q 005039 65 FQAG---PNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVY--TEVAGLSGLDFAYTDKSAVYHTKNDRLDLLK 139 (717)
Q Consensus 65 f~~g---~~~~L~~~y~~~a~~P~~~~~~~~~f~~g~ipsdTD~~~F--~~~~GIPgLd~a~~~~~~~YHT~~Dt~d~i~ 139 (717)
+... .++.+++...++++.. +.....+.. .+.+||...| .. .|+|.+++..- . ..+||+. |+++
T Consensus 266 ~~~~~~~~~~~l~~~l~~~a~~~-gi~~~~~~~----~~ggtDa~~~~~~~-~GiPtv~lg~~-~-~~~Hs~~---E~v~ 334 (373)
T 1vhe_A 266 VYDASMVSHKGLRDAVVATAEEA-GIPYQFDAI----AGGGTDSGAIHLTA-NGVPALSITIA-T-RYIHTHA---AMLH 334 (373)
T ss_dssp EEETTEECCHHHHHHHHHHHHHH-TCCCEEEEE----TTCCCTHHHHTTST-TCCCEEEEEEE-E-BSTTSSC---EEEE
T ss_pred EeCCCCCCCHHHHHHHHHHHHHc-CCCeEEecC----CCCCccHHHHHHhC-CCCcEEEEccc-c-ccCCChh---heec
Confidence 2111 2566766665543210 111111122 2567999999 44 79999987542 2 3489985 6788
Q ss_pred HhHHHHHHHHHHHHHHHHhcC
Q 005039 140 PGSLQHLGENMLDFLLQTASS 160 (717)
Q Consensus 140 ~~slq~~g~~~l~lv~~la~~ 160 (717)
.+.+++..+.+..+++.+++.
T Consensus 335 ~~dl~~~~~ll~~~l~~l~~~ 355 (373)
T 1vhe_A 335 RDDYENAVKLITEVIKKLDRK 355 (373)
T ss_dssp HHHHHHHHHHHHHHHHHCCHH
T ss_pred HHHHHHHHHHHHHHHHHhcHH
Confidence 999999999999999988653
No 20
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=98.02 E-value=7.8e-06 Score=87.89 Aligned_cols=138 Identities=13% Similarity=0.176 Sum_probs=82.6
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCccchHHHHHhCCCccceeEEEEeccCCCCC-c-----ce--EEE--eCC-
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGG-R-----SA--LFQ--AGP- 69 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp~~~~i~a~INlD~~G~gG-~-----~~--lf~--~g~- 69 (717)
+||++|.+.+.+.+++++|.|+|++.||.|+.||+++ ..+..++||+|+.+.++ + .. .+. .++
T Consensus 194 ~l~a~~~l~~~~~~~~~~i~~~~~~~EE~G~~g~~~~------~~~~~~~i~~D~~~~~~~p~~~~~g~~i~~~~~~~~~ 267 (349)
T 2gre_A 194 LLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNSNI------PEETVEYLAVDMGALGDGQASDEYTVSICAKDSSGPY 267 (349)
T ss_dssp HHHHHHHHHHHTCCCSEEEEEEEESCC----CCCCCC------CTTEEEEEEECCCCCSCC--CCTTSEEEEEEETTEEC
T ss_pred HHHHHHHHHhccCCCCceEEEEEECcccCCchhhccc------ccCCCEEEEEecccccCCCCCCCCceEEEEccCCCCC
Confidence 4789999986666788999999999999999999976 24678999999987753 1 22 221 122
Q ss_pred ChHHHHHHHHhcCCCCCccccccccccCCCCCCCChHhhhh-cCCCcEEEEeeeCCCCCCCCCCCCcCCCCHhHHHHHHH
Q 005039 70 NLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGE 148 (717)
Q Consensus 70 ~~~L~~~y~~~a~~P~~~~~~~~~f~~g~ipsdTD~~~F~~-~~GIPgLd~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~ 148 (717)
++.+.+..++.++.. +-....+.. .+.+||...|.. ..|+|.+++.. . ...+|| .|+++.+.+.+..+
T Consensus 268 ~~~l~~~l~~~a~~~-gi~~q~~~~----~ggGsDa~~~~~~~~GiPt~~lg~-~-~~~~Hs----~E~~~~~dl~~~~~ 336 (349)
T 2gre_A 268 HYALRKHLVELAKTN-HIEYKVDIY----PYYGSDASAAIRAGFDVKHALIGA-G-IDSSHA----FERTHESSIAHTEA 336 (349)
T ss_dssp CHHHHHHHHHHHHHH-TCCEEEEEC----SCC--------CCSSSCEEEEEEE-C-CBSTTS----SEEEEHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc-CCCcEEecc----CCCCccHHHHHHhCCCCcEEEecc-C-cccccc----ceeccHHHHHHHHH
Confidence 677777665543210 111111122 246789888842 37999997753 3 334786 67788888988777
Q ss_pred HHHHHHH
Q 005039 149 NMLDFLL 155 (717)
Q Consensus 149 ~~l~lv~ 155 (717)
.+..++.
T Consensus 337 ll~~~l~ 343 (349)
T 2gre_A 337 LVYAYVM 343 (349)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7666654
No 21
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=97.71 E-value=2.8e-05 Score=83.22 Aligned_cols=141 Identities=15% Similarity=0.141 Sum_probs=78.8
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCccchHHHHHhCCCccceeEEEEeccCCCC---Cc-----------ceEEE
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIG---GR-----------SALFQ 66 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp~~~~i~a~INlD~~G~g---G~-----------~~lf~ 66 (717)
||+++|.+. +++++|+|+|++.||.|+.|+++++++ .+..++||+|+.+.+ |+ ..+..
T Consensus 175 ~l~a~~~l~----~~~~~i~~~~~~~EE~G~~G~~~~~~~----~~~~~~i~~d~~~~~~~~G~~~h~~~~~~G~g~~i~ 246 (340)
T 2fvg_A 175 LIDVLESGV----SPAYDTYFVFTVQEETGLRGSAVVVEQ----LKPTCAIVVETTTAGDNPELEERKWATHLGDGPAIT 246 (340)
T ss_dssp HHHHHHTCC----CCSEEEEEEEECCCC-----CHHHHHH----HCCSEEEEEEEEEECSCSTTCCSSSSCCTTSCCEEC
T ss_pred HHHHHHHhh----ccCCcEEEEEEcccccchhhhHHHhhc----cCCCEEEEEecccCCCCCCCccccCCcccCCCcEEE
Confidence 467777765 478999999999999999999999863 234678889876532 21 11111
Q ss_pred ---eC--CChHHHHHHHHhcCCCCCccccccccccCCCCCCCChHhhhh-cCCCcEEEEeeeCCCCCCCCCCCCcCCCCH
Q 005039 67 ---AG--PNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKP 140 (717)
Q Consensus 67 ---~g--~~~~L~~~y~~~a~~P~~~~~~~~~f~~g~ipsdTD~~~F~~-~~GIPgLd~a~~~~~~~YHT~~Dt~d~i~~ 140 (717)
.+ .++.+.+..++.++. .+.....+. ..+.+||...|.. ..|+|.+.+.- ...+ +||+. |+++.
T Consensus 247 ~~~~~~~~~~~l~~~l~~~a~~-~gi~~~~~~----~~~ggtDa~~~~~~~~GiP~v~~g~-~~~~-~Hs~~---E~v~~ 316 (340)
T 2fvg_A 247 FYHRGYVIPKEIFQTIVDTAKN-NDIPFQMKR----RTAGGTDAGRYARTAYGVPAGVIST-PARY-IHSPN---SIIDL 316 (340)
T ss_dssp SCCSSSCCCHHHHHHHHHHHHH-TTCCCEECC----CC-------------CCSCEEEEEE-EEEE-SSTTC---EEEEH
T ss_pred EeCCCCCCCHHHHHHHHHHHHH-cCCCeEEEe----cCCCCccHHHHHhhCCCCcEEEecc-cccc-cCChh---hcccH
Confidence 11 255666655543221 011111111 1356899999875 36999997754 2233 99986 56779
Q ss_pred hHHHHHHHHHHHHHHHHhc
Q 005039 141 GSLQHLGENMLDFLLQTAS 159 (717)
Q Consensus 141 ~slq~~g~~~l~lv~~la~ 159 (717)
+.+++..+.+..+++.+++
T Consensus 317 ~dl~~~~~ll~~~~~~l~~ 335 (340)
T 2fvg_A 317 NDYENTKKLIKVLVEEGKI 335 (340)
T ss_dssp HHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHHHHhccc
Confidence 9999999999999988765
No 22
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=96.76 E-value=0.0044 Score=66.94 Aligned_cols=138 Identities=18% Similarity=0.155 Sum_probs=93.8
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCccchHHHHHhCCCccceeEEEEeccCCCC-----------CcceEEEeCC
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIG-----------GRSALFQAGP 69 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp~~~~i~a~INlD~~G~g-----------G~~~lf~~g~ 69 (717)
+||++|.++. ..+++++.++|+.-||.|+.||+....+.. ....|.+|+.-++ |..+....++
T Consensus 190 ~l~~l~~l~~--~~~~~~v~~~ft~qEEvG~~Ga~~a~~~~~----pd~~i~~D~~~a~d~p~~~~~lg~G~~i~~~d~~ 263 (355)
T 3kl9_A 190 VSELAEALSG--QKLGNELYLGSNVQEEVGLRGAHTSTTKFD----PEVFLAVDCSPAGDVYGGQGKIGDGTLIRFYDPG 263 (355)
T ss_dssp HHHHHHHHSS--CCCSSEEEEEEESCCTTTSHHHHHHHHHHC----CSEEEEEEEEECCGGGTSSCCTTSCEEEEEEETT
T ss_pred HHHHHHHhhh--cCCCceEEEEEECccccCcchhHHHHhccC----CCEEEEecCccCCCCCCcccccCCCcEEEEecCC
Confidence 4788888864 357899999999999999999998764322 2246888875332 3334443332
Q ss_pred ---ChHHHHHHHHhcC---CCCCccccccccccCCCCCCCChHhhhh-cCCCcEEEEeeeCCCCCCCCCCCCcCCCCHhH
Q 005039 70 ---NLWAVENFAAVAK---YPSGQIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGS 142 (717)
Q Consensus 70 ---~~~L~~~y~~~a~---~P~~~~~~~~~f~~g~ipsdTD~~~F~~-~~GIPgLd~a~~~~~~~YHT~~Dt~d~i~~~s 142 (717)
++.+.+...+.++ -|+ |.... ..+||-..+.. ..|+|..++.. . ....||++ |.++.+.
T Consensus 264 ~~~~~~l~~~l~~~a~~~gIp~-----q~~~~----ggGtDa~~i~~a~~Gipt~~igv-p-~~~~Hs~~---E~~~~~D 329 (355)
T 3kl9_A 264 HLLLPGMKDFLLTTAEEAGIKY-----QYYCG----KGGTDAGAAHLKNGGVPSTTIGV-C-ARYIHSHQ---TLYAMDD 329 (355)
T ss_dssp EECCHHHHHHHHHHHHHTTCCE-----EEEEC----SSCCTHHHHTTSTTCCCEEEEEE-E-EBSCSSSC---EEEEHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCE-----EEECC----CcchHHHHHHHhCCCCCEEEEcc-C-cCCCCCcc---eEeeHHH
Confidence 6777777765533 232 22221 36899888764 36899998754 2 23489886 6777889
Q ss_pred HHHHHHHHHHHHHHHh
Q 005039 143 LQHLGENMLDFLLQTA 158 (717)
Q Consensus 143 lq~~g~~~l~lv~~la 158 (717)
+.+..+.+.+++..++
T Consensus 330 i~~~~~ll~~~l~~l~ 345 (355)
T 3kl9_A 330 FLEAQAFLQALVKKLD 345 (355)
T ss_dssp HHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHhC
Confidence 9888888888877664
No 23
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=96.33 E-value=0.011 Score=62.84 Aligned_cols=140 Identities=16% Similarity=0.162 Sum_probs=91.6
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCccchHHHHHhCCCccceeEEEEeccCCCCC---------------cceEE
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGG---------------RSALF 65 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp~~~~i~a~INlD~~G~gG---------------~~~lf 65 (717)
|+|+++.+.+ ..++.++.++++..||.|+.|++.....- ...+.+++|++..+. ..+..
T Consensus 177 ~l~al~~l~~--~~~~~~~~~~~t~~EEvG~~Ga~~~~~~i----~~~~~i~~D~~~~~~~~~~~~~~~~~~~~G~~i~~ 250 (348)
T 1ylo_A 177 LVTLLRELHD--AELPAEVWLVASSSEEVGLRGGQTATRAV----SPDVAIVLDTACWAKNFDYGAANHRQIGNGPMLVL 250 (348)
T ss_dssp HHHHHHHHTT--CCCSSEEEEEEESCCTTSSHHHHHHHHHH----CCSEEEEECCCCCSSTTCCSTTCCCCTTSCCEEEE
T ss_pred HHHHHHHhhh--cCCCceEEEEEEcccccchhHHHHhhccc----CCCEEEEEeccccCCCCCCCccccccCCCCcEEEE
Confidence 4678888764 23678999999999999999998765321 124668888876532 22222
Q ss_pred EeC---CChHHHHHHHHhcC---CCCCccccccccccCCCCCCCChHhhhh-cCCCcEEEEeeeCCCCCCCCCCCCcCCC
Q 005039 66 QAG---PNLWAVENFAAVAK---YPSGQIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLL 138 (717)
Q Consensus 66 ~~g---~~~~L~~~y~~~a~---~P~~~~~~~~~f~~g~ipsdTD~~~F~~-~~GIPgLd~a~~~~~~~YHT~~Dt~d~i 138 (717)
... .++.+.+...++++ .|+. .+.. .+.+||-..+.. ..|+|.+++.- .. ...||+ .|++
T Consensus 251 ~~~~~~~~~~l~~~~~~~a~~~gi~~~----~~~~----~~ggsDa~~~~~~~~gipt~~lg~-~~-~~~Hs~---~E~~ 317 (348)
T 1ylo_A 251 SDKSLIAPPKLTAWIETVAAEIGVPLQ----ADMF----SNGGTDGGAVHLTGTGVPTLVMGP-AT-RHGHCA---ASIA 317 (348)
T ss_dssp ECSSCBCCHHHHHHHHHHHHHHTCCCE----EEEC----SSCCCHHHHHHTSTTCCCEEEEEC-CC-BSCSSS---CEEE
T ss_pred eCCCCCCCHHHHHHHHHHHHHcCCCeE----Eeec----CCCcchHHHHHHhcCCCCEEEECc-cc-CcCCCc---ceEe
Confidence 212 25677666655432 2221 1121 257899998853 36999997643 33 348998 4677
Q ss_pred CHhHHHHHHHHHHHHHHHHhc
Q 005039 139 KPGSLQHLGENMLDFLLQTAS 159 (717)
Q Consensus 139 ~~~slq~~g~~~l~lv~~la~ 159 (717)
+.+.+....+.+..++..++.
T Consensus 318 ~~~d~~~~~~ll~~~~~~l~~ 338 (348)
T 1ylo_A 318 DCRDILQMEQLLSALIQRLTR 338 (348)
T ss_dssp EHHHHHHHHHHHHHHHHTCCH
T ss_pred eHHHHHHHHHHHHHHHHHhhH
Confidence 799999988888888877653
No 24
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=96.19 E-value=0.016 Score=61.61 Aligned_cols=145 Identities=12% Similarity=0.141 Sum_probs=87.2
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCccchHHHHHhCCCccceeEEEEeccCCCCC------------cceEEEeC
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGG------------RSALFQAG 68 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp~~~~i~a~INlD~~G~gG------------~~~lf~~g 68 (717)
|+|+++.+.+ .+++.++.++|+..||.|+.|++... +...+ .+.+.+|++..+. ..+-+...
T Consensus 180 ~l~al~~l~~--~~~~~~~~~~~t~~EEvG~~Ga~~~~--~~i~~--~~~i~~D~~~~~~~~~~~~~~~~~g~~i~~~~~ 253 (346)
T 1vho_A 180 LVKVLEFLKR--YDHPWDVYVVFSVQEETGCLGALTGA--YEINP--DAAIVMDVTFASEPPFSDHIELGKGPVIGLGPV 253 (346)
T ss_dssp HHHHHHHHTT--CCCSSEEEEEEECTTSSSHHHHHHTT--CCCCC--SEEEEEEEECCCCTTSCCCCCTTSCCEEECSTT
T ss_pred HHHHHHHhhh--cCCCceEEEEEECCcccchhhHHHHh--cccCC--CEEEEeecccccCCCCCcccccCCCceEEeCCc
Confidence 4678888764 23568999999999999999998754 22222 3557777766531 11111111
Q ss_pred CChHHHHHHHHhcCCCCCccccccccccCCCCCCCChHhhhh-cCCCcEEEEeeeCCCCCCCCCCCCcCCCCHhHHHHHH
Q 005039 69 PNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLG 147 (717)
Q Consensus 69 ~~~~L~~~y~~~a~~P~~~~~~~~~f~~g~ipsdTD~~~F~~-~~GIPgLd~a~~~~~~~YHT~~Dt~d~i~~~slq~~g 147 (717)
.++.+++...++++. .+......... | +++||-..+.. ..|+|.+++.- .. ...|++ .|+++.+.+.+..
T Consensus 254 ~~~~l~~~~~~~a~~-~gi~~~~~~~~-g--~ggsDa~~~~~~~~gipt~~lg~-~~-~~~Hs~---~E~~~~~dl~~~~ 324 (346)
T 1vho_A 254 VDRNLVQKIIEIAKK-HNVSLQEEAVG-G--RSGTETDFVQLVRNGVRTSLISI-PL-KYMHTP---VEMVDPRDVEELA 324 (346)
T ss_dssp SCHHHHHHHHHHHHH-TTCCCEEESSC-C--C----CTTHHHHHTTCEEEEEEE-EC-BSTTST---TEEECHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH-CCCCEEEEeCC-C--CCCchHHHHHHhCCCCcEEEEeh-hh-cccccH---HHhcCHHHHHHHH
Confidence 256677666554321 11111111110 1 26789888853 37999998754 33 348998 4677899999999
Q ss_pred HHHHHHHHHHhcC
Q 005039 148 ENMLDFLLQTASS 160 (717)
Q Consensus 148 ~~~l~lv~~la~~ 160 (717)
+.+..++..++..
T Consensus 325 ~ll~~~~~~~~~~ 337 (346)
T 1vho_A 325 RLLSLVAVELEVE 337 (346)
T ss_dssp HHHHHHHHHCC--
T ss_pred HHHHHHHHHhhhh
Confidence 9999998887754
No 25
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=94.96 E-value=0.1 Score=56.18 Aligned_cols=137 Identities=19% Similarity=0.202 Sum_probs=87.5
Q ss_pred hHHHHHHhcCCCCCCceEEEEecCccccCccchHHHHHh-CCCccceeEEEEeccCCCC------------CcceEEEeC
Q 005039 2 LELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQ-HPWSTTIRVAVDLEAMGIG------------GRSALFQAG 68 (717)
Q Consensus 2 LElaR~l~~~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~-hp~~~~i~a~INlD~~G~g------------G~~~lf~~g 68 (717)
||++|.++. +++++.++|++-||.|+.||+.-... .| + ..|.+|+.-++ |+..+...+
T Consensus 194 l~~l~~l~~----~~~~v~~~ft~qEEVG~~ga~~aa~~i~p---d--~~i~~Dv~~a~dp~~~~~~~~~lg~Gpv~d~~ 264 (354)
T 2vpu_A 194 IEAARQLGD----HEADIYIVGSVQEEVGLRGARVASYAINP---E--VGIAMDVTFAKQPHDKGKIVPELGKGPVMDVG 264 (354)
T ss_dssp HHHHHHCCC----CSSEEEEEECSCCTTTSHHHHHHHHHHCC---S--EEEEEEEEECCCTTSTTCCCCCTTSCCEEEES
T ss_pred HHHHHHhhc----CCCeEEEEEECCcccCccchhhhhcccCC---C--EEEEecccccCCCCcccccCceECCcceEcCC
Confidence 567776642 68999999999999999999875532 22 2 45566653111 111133333
Q ss_pred -C-ChHHHHHHHHhcC---CCCCccccccccccCCCCCCCChHhhhh-cCCCcEEEEeeeCCCCCCCCCCCCcCCCCHhH
Q 005039 69 -P-NLWAVENFAAVAK---YPSGQIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGS 142 (717)
Q Consensus 69 -~-~~~L~~~y~~~a~---~P~~~~~~~~~f~~g~ipsdTD~~~F~~-~~GIPgLd~a~~~~~~~YHT~~Dt~d~i~~~s 142 (717)
+ ++.+.+...+.++ -|+. .+... -+.+||-..+.. ..|+|..++..- . ...|++. |.++.+.
T Consensus 265 ~~~~~~l~~~l~~~a~~~gIp~q----~~~~~---g~gGtDa~~i~~a~~Gipt~~Igvp-~-~~~Hs~~---E~~~~~D 332 (354)
T 2vpu_A 265 PNINPKLRAFADEVAKKYEIPLQ----VEPSP---RPTGTDANVMQINKEGVATAVLSIP-I-RYMHSQV---ELADARD 332 (354)
T ss_dssp TTSCHHHHHHHHHHHHHTTCCCE----EEECC---SCCSSTHHHHHTSTTCCEEEEEEEE-E-BSTTSTT---CEEEHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCcE----EEeCC---CCCccHHHHHHHhcCCCCEEEECcc-c-ccCcCcc---eEeeHHH
Confidence 3 6777777765433 2331 11111 125899888753 368999997542 2 2489985 5677889
Q ss_pred HHHHHHHHHHHHHHHhc
Q 005039 143 LQHLGENMLDFLLQTAS 159 (717)
Q Consensus 143 lq~~g~~~l~lv~~la~ 159 (717)
+.+..+.+.+++..++.
T Consensus 333 ~~~~~~ll~~~l~~l~~ 349 (354)
T 2vpu_A 333 VDNTIKLAKALLEELKP 349 (354)
T ss_dssp HHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHhccH
Confidence 99988888888887754
No 26
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=94.89 E-value=0.013 Score=57.48 Aligned_cols=52 Identities=27% Similarity=0.399 Sum_probs=41.1
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccC-ccchHHHHHhCCC-ccceeEEEE
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEG-LNGAHSFVTQHPW-STTIRVAVD 52 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~G-LlGS~~Fv~~hp~-~~~i~a~IN 52 (717)
||+++|.|.+.+.+++++|.|+|+.+||.| +.|+++++++++. ..+..+++|
T Consensus 121 ~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~~~~id 174 (198)
T 1q7l_A 121 YLEAVRRLKVEGHRFPRTIHMTFVPDEEVGGHQGMELFVQRPEFHALRAGFALD 174 (198)
T ss_dssp HHHHHHHHHHTTCCCSSCEEEEEESCGGGTSTTTHHHHTTSHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHcCCCCCCCEEEEEEcccccCccccHHHHHHhHHhccCCcCEEEe
Confidence 589999998767788999999999999997 8999999954332 124556664
No 27
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=94.69 E-value=0.029 Score=59.42 Aligned_cols=125 Identities=11% Similarity=0.027 Sum_probs=80.1
Q ss_pred EEEEecCccccCccchHHHH---HhCCCccceeEEEEeccCCCC-------CcceEEEeC--CChHHHHHHHHhcCCCCC
Q 005039 19 VIFLFNTGEEEGLNGAHSFV---TQHPWSTTIRVAVDLEAMGIG-------GRSALFQAG--PNLWAVENFAAVAKYPSG 86 (717)
Q Consensus 19 IiFlf~~aEE~GLlGS~~Fv---~~hp~~~~i~a~INlD~~G~g-------G~~~lf~~g--~~~~L~~~y~~~a~~P~~ 86 (717)
+.++|++.||.|+.|++... .+ .-+..+.+++|+...+ |..+-...+ +++.+.+..++.++. .+
T Consensus 183 i~~~~t~~EEvG~~Ga~~a~~~~~~---~~~~~~~i~~D~~~~~~~~~~~~G~~i~~~~~~~~~~~l~~~~~~~a~~-~g 258 (321)
T 3cpx_A 183 GIIAFTCWEEHGGGSVAYLARWIYE---TFHVKQSLICDITWVTEGVEAGKGVAISMRDRMIPRKKYVNRIIELARQ-TD 258 (321)
T ss_dssp EEEEEESSTTTTCCSHHHHHHHHHH---HHCCCEEEECCCEECCSSSCTTSCEEEEEESSSCCCHHHHHHHHHHHTT-SS
T ss_pred cEEEEECCccCchhcchhhhhcccc---ccCCCEEEEEeCccccCCcccCCCcEEEECCCCCCCHHHHHHHHHHHHH-cC
Confidence 88999999999999998632 11 1134578889987643 333322212 267777777665442 11
Q ss_pred ccccccccccCCCCCCCChHhhhh-cCCCcEEEEeeeCCCCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHH
Q 005039 87 QIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQ 156 (717)
Q Consensus 87 ~~~~~~~f~~g~ipsdTD~~~F~~-~~GIPgLd~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~~l~lv~~ 156 (717)
-....+.. .+++||-..+.. ..|+|.+++.-- ....||+. |.++.+++....+.+.+++..
T Consensus 259 i~~q~~~~----~~GGsD~~~~~~s~~Gipt~~lG~~--~~~~Hs~~---E~~~~~dl~~~~~ll~~~~~~ 320 (321)
T 3cpx_A 259 IPFQLEVE----GAGASDGRELQLSPYPWDWCFIGAP--EKDAHTPN---ECVHKKDIESMVGLYKYLMEK 320 (321)
T ss_dssp CCEEEEEC----SSCCCHHHHHHHSSSCCBCCBEECE--EBSTTSTT---CEEEHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeC----CCCCccHHHHHHhCCCCCEEEEchh--hcccchhh---hheeHHHHHHHHHHHHHHHHh
Confidence 11111111 467899888742 379999987543 34579976 567788888888877777654
No 28
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=94.56 E-value=0.033 Score=61.75 Aligned_cols=55 Identities=11% Similarity=0.163 Sum_probs=46.9
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCccchHHHHHhCC--CccceeEEEEecc
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHP--WSTTIRVAVDLEA 55 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp--~~~~i~a~INlD~ 55 (717)
||+++|.|.+.+.+++++|.|+|+.+||.|..||+.++++++ +.+++.+++++|.
T Consensus 144 ~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~Ga~~~~~~~~~~~~~~~d~~i~~e~ 200 (479)
T 2zog_A 144 WMNALEAYQKTGQEIPVNLRFCLEGMEESGSEGLDELIFAQKDKFFKDVDYVCISDN 200 (479)
T ss_dssp HHHHHHHHHHTTCCCSSEEEEEEESCGGGTCTTHHHHHHHTTTTTTTTCCEEEECCC
T ss_pred HHHHHHHHHHhCCCCCCcEEEEEecccccCCccHHHHHHhhhhhhcccCCEEEEeCC
Confidence 588999998767778899999999999999999999998764 3346788888885
No 29
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=93.60 E-value=0.054 Score=60.36 Aligned_cols=56 Identities=11% Similarity=0.150 Sum_probs=48.0
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCccchHHHHHhCCC--ccceeEEEEeccC
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPW--STTIRVAVDLEAM 56 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp~--~~~i~a~INlD~~ 56 (717)
||+.+|+|.+.+.+++++|.|+|..+||.|..|++.+++++.. .+++.+++++|..
T Consensus 151 ~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~~d~~~~~~~~ 208 (485)
T 3dlj_A 151 WINAVSAFRALEQDLPVNIKFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDNL 208 (485)
T ss_dssp HHHHHHHHHHTTCCCSSEEEEEEESCGGGTTTTHHHHHHHHTTTTSTTCCEEEECCCB
T ss_pred HHHHHHHHHHhCCCCCccEEEEEEcccccCCccHHHHHHhhhhhcccCCCEEEEcCCC
Confidence 4788999987777889999999999999999999999987653 4578899999853
No 30
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=93.40 E-value=0.066 Score=57.13 Aligned_cols=51 Identities=22% Similarity=0.298 Sum_probs=42.0
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCcccc-CccchHHHHHhCCCccceeEEEEeccC
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEE-GLNGAHSFVTQHPWSTTIRVAVDLEAM 56 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~-GLlGS~~Fv~~hp~~~~i~a~INlD~~ 56 (717)
+|+++|.|.+.+ ++++|+|+|+.+||. |+.||+.++++.+ ++.+.++.|..
T Consensus 113 ~l~a~~~l~~~~--~~~~v~~~~~~~EE~~g~~G~~~~~~~~~---~~d~~i~~ep~ 164 (356)
T 3ct9_A 113 LLQVFLQLCRTS--QNYNLIYLASCEEEVSGKEGIESVLPGLP---PVSFAIVGEPT 164 (356)
T ss_dssp HHHHHHHHTTSC--CSSEEEEEEECCGGGTCTTTHHHHGGGSC---CCSEEEECCSB
T ss_pred HHHHHHHHHhcC--CCCCEEEEEEeCcccCCccCHHHHHhhCC---CCCEEEEcCCC
Confidence 478999998744 889999999999999 9999999997663 45577777764
No 31
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=93.02 E-value=0.046 Score=59.00 Aligned_cols=55 Identities=18% Similarity=0.375 Sum_probs=45.2
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCccchHHHHHhCCCccceeEEEEeccCC
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 57 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp~~~~i~a~INlD~~G 57 (717)
||+++|.|.+.+.+++++|+|+|..+||.|..|++.+++++. .++.+++++|..+
T Consensus 127 ~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~G~~~~~~~~~--~~~d~~i~~e~~~ 181 (393)
T 1cg2_A 127 ILHTLKLLKEYGVRDYGTITVLFNTDEEKGSFGSRDLIQEEA--KLADYVLSFEPTS 181 (393)
T ss_dssp HHHHHHHHHHTTCCCSSEEEEEEESCGGGTTTTTHHHHHHHH--HHCSEEEECCCEE
T ss_pred HHHHHHHHHhcCCCCCCCEEEEEEcccccCCccHHHHHHHHh--hcCCEEEEeCCCC
Confidence 578999998766677789999999999999999999997542 3567888888653
No 32
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=92.42 E-value=0.1 Score=56.98 Aligned_cols=52 Identities=21% Similarity=0.511 Sum_probs=42.0
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCccchHHHHHhCCCccceeEEEEec
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLE 54 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp~~~~i~a~INlD 54 (717)
||+++|.|++.+.+++++|+|+|..+|| |..|++.++++.. .+.+.++++++
T Consensus 125 ~l~a~~~l~~~~~~~~~~v~~~~~~~EE-g~~G~~~~~~~g~-~~~~d~~i~~~ 176 (418)
T 1xmb_A 125 LLGAAKILHEHRHHLQGTVVLIFQPAEE-GLSGAKKMREEGA-LKNVEAIFGIH 176 (418)
T ss_dssp HHHHHHHHHHTGGGCSSEEEEEEECCTT-TTCHHHHHHHTTT-TTTEEEEEEEE
T ss_pred HHHHHHHHHhccccCCceEEEEEecccc-ccccHHHHHHcCC-cCCCCEEEEEe
Confidence 5789999987666789999999999999 9999999996543 33466777754
No 33
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=91.32 E-value=0.14 Score=56.59 Aligned_cols=43 Identities=16% Similarity=0.223 Sum_probs=37.5
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCccchHHHHHhCCC
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPW 43 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp~ 43 (717)
+|+++|.|.+.+.+++++|.|+|+.+||.|..|++.+++++..
T Consensus 127 ~l~a~~~l~~~~~~~~~~i~~i~~~~EE~g~~G~~~~~~~~~~ 169 (470)
T 1lfw_A 127 AYYGMLLLKEAGFKPKKKIDFVLGTNEETNWVGIDYYLKHEPT 169 (470)
T ss_dssp HHHHHHHHHHHTCCCSSEEEEEEESCTTTTCHHHHHHHHHSCC
T ss_pred HHHHHHHHHHcCCCCCCCEEEEEecCcccCCccHHHHHHhCcC
Confidence 4788999987677789999999999999999999999977653
No 34
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=91.24 E-value=0.077 Score=58.94 Aligned_cols=56 Identities=14% Similarity=0.156 Sum_probs=44.2
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCccchHHHHHhCCC-ccceeEEEEeccC
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPW-STTIRVAVDLEAM 56 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp~-~~~i~a~INlD~~ 56 (717)
||+++|.|.+.+.+++++|.|+|+.+||.|..|++.++++++. .+.+.++++.|..
T Consensus 155 ~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~d~~i~~~~~ 211 (481)
T 2pok_A 155 RLSALRKYMQHHDDLPVNISFIMEGAEESASTDLDKYLEKHADKLRGADLLVWEQGT 211 (481)
T ss_dssp HHHHHHHHHHTCSSCSSEEEEEEESCGGGTTTTHHHHHHHHHHHHTTCSEEECSCCB
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEecccccCchhHHHHHHHhHhhccCCCEEEECCCC
Confidence 5889999987645788999999999999999999999976531 1226677877753
No 35
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=91.00 E-value=0.56 Score=50.24 Aligned_cols=131 Identities=15% Similarity=0.236 Sum_probs=78.0
Q ss_pred hHHHHHHhcCCCCCCceEEEEecCccccCccchHHHHHhCCCccceeEEEEeccCCCC---------------CcceEEE
Q 005039 2 LELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIG---------------GRSALFQ 66 (717)
Q Consensus 2 LElaR~l~~~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp~~~~i~a~INlD~~G~g---------------G~~~lf~ 66 (717)
||++|.++ . ++++.++|++-||.|+.|++.-..+ ..++ ..|.+|+.-++ |+.+...
T Consensus 189 l~~l~~l~---~--~~~~~~~ft~qEEVG~~Ga~~aa~~--i~pd--~~i~vDv~~a~d~p~~~~~~~~~lg~GpvI~~~ 259 (343)
T 3isx_A 189 VEVFKRIK---P--AVTLYGVFSVQEEVGLVGASVAGYG--VPAD--EAIAIDVTDSADTPKAIKRHAMRLSGGPALKVK 259 (343)
T ss_dssp HHHHHHCC---C--SSEEEEEEECCCCTTSCCSTTTGGG--CCCS--EEEEEEEEECCCSTTCCCTTCCCTTSCCEEECB
T ss_pred HHHHHhcc---C--CCeEEEEEECCcccCchhHHHHhhc--CCCC--EEEEEeCcCCCCCCCcccccccccCCCcEEEEc
Confidence 56666653 1 6899999999999999999865532 2222 35666653221 2223222
Q ss_pred eCC---ChHHHHHHHHhcC---CCCCccccccccccCCCCCCCChHhhhh-cCCCcEEEEeeeCCCCCCCCCCCCcCCCC
Q 005039 67 AGP---NLWAVENFAAVAK---YPSGQIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLK 139 (717)
Q Consensus 67 ~g~---~~~L~~~y~~~a~---~P~~~~~~~~~f~~g~ipsdTD~~~F~~-~~GIPgLd~a~~~~~~~YHT~~Dt~d~i~ 139 (717)
.+. ++.+.+...+.++ -|+- .++.. ..+||-..+.. ..|+|..++..- ....||++ |.++
T Consensus 260 d~~~~~d~~l~~~l~~~A~~~gIp~Q----~~v~~----ggGTDa~~i~~a~~Gipt~~Igvp--~r~~Hs~~---E~~~ 326 (343)
T 3isx_A 260 DRASISSKRILENLIEIAEKFDIKYQ----MEVLT----FGGTNAMGYQRTREGIPSATVSIP--TRYVHSPS---EMIA 326 (343)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTTCCCE----ECCCB----CCCSSHHHHHHHTSSCCEEEEEEE--EBSTTSTT---EEEC
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCeE----EecCC----CCchHHHHHHHhcCCCCEEEEccc--cccccchh---hEec
Confidence 222 4666666655432 2321 11221 36899777643 379999988642 22489885 5666
Q ss_pred HhHHHHHHHHHHHHH
Q 005039 140 PGSLQHLGENMLDFL 154 (717)
Q Consensus 140 ~~slq~~g~~~l~lv 154 (717)
.+.++++.+.+.+++
T Consensus 327 ~~Di~~~~~ll~~~l 341 (343)
T 3isx_A 327 PDDVEATVDLLIRYL 341 (343)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 777877766665554
No 36
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=90.51 E-value=0.18 Score=56.31 Aligned_cols=43 Identities=9% Similarity=0.239 Sum_probs=38.3
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCccchHHHHHhCCC
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPW 43 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp~ 43 (717)
||+.+|+|++.+.+++++|+|+|..+||.|..|+++++++++.
T Consensus 146 ~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~g~~~~~~~~~~ 188 (492)
T 3khx_A 146 AYYAIKILEDMNVDWKKRIHMIIGTDEESDWKCTDRYFKTEEM 188 (492)
T ss_dssp HHHHHHHHHHTTCCCSSEEEEEEECCTTCCCCTTSHHHHHSCC
T ss_pred HHHHHHHHHHcCCCCCCCEEEEEECCccCCCcCHHHHHHhCcC
Confidence 4788999987677889999999999999999999999988863
No 37
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=89.52 E-value=0.17 Score=56.16 Aligned_cols=55 Identities=15% Similarity=0.172 Sum_probs=44.3
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCccchHHHHHhCC-CccceeEEEEeccC
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHP-WSTTIRVAVDLEAM 56 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp-~~~~i~a~INlD~~ 56 (717)
+|+.+|+|++.+.+++ +|+|+|..+||.|..|++.++++++ ..+++.+++.+|..
T Consensus 138 ~l~a~~~l~~~~~~~~-~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~d~~~~~~~~ 193 (472)
T 3pfe_A 138 SLTAIRALEQQGLPYP-RCILIIEACEESGSYDLPFYIELLKERIGKPSLVICLDSG 193 (472)
T ss_dssp HHHHHHHHHHTTCCCE-EEEEEEESCGGGTSTTHHHHHHHHHHHHCCCSEEEEECCB
T ss_pred HHHHHHHHHHcCCCCC-cEEEEEEeCCCCCChhHHHHHHHhHhhccCCCEEEEeCCC
Confidence 4788999987666666 9999999999999999999998763 12467888888853
No 38
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=89.48 E-value=0.2 Score=54.50 Aligned_cols=54 Identities=20% Similarity=0.041 Sum_probs=44.0
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCccchHHHHHhCCCccceeEEEEeccCC
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 57 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp~~~~i~a~INlD~~G 57 (717)
+|+++|+|++.+.+++++|.|+|..+||.|..|++.++++.. ++.++++.|..+
T Consensus 152 ~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~G~~~~~~~~~---~~d~~i~~ep~~ 205 (433)
T 3pfo_A 152 MIFALDAIRTAGYAPDARVHVQTVTEEESTGNGALSTLMRGY---RADACLIPEPTG 205 (433)
T ss_dssp HHHHHHHHHHTTEEESSCEEEEEESCTTTTCHHHHHHHHTTC---CCSEEEECCCCS
T ss_pred HHHHHHHHHHcCCCCCccEEEEEEecCccCChhHHHHHhcCC---CCCEEEEeCCCC
Confidence 478899998766678899999999999999899999996432 567788888543
No 39
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=89.06 E-value=0.16 Score=54.30 Aligned_cols=51 Identities=22% Similarity=0.178 Sum_probs=40.3
Q ss_pred ChHHHHHHhcCCCCC---Cce--EEEEecCcccc-CccchHHHHHhCCCccceeEEEEecc
Q 005039 1 MLELARVMSQWAHEF---KNA--VIFLFNTGEEE-GLNGAHSFVTQHPWSTTIRVAVDLEA 55 (717)
Q Consensus 1 mLElaR~l~~~~~~p---~rt--IiFlf~~aEE~-GLlGS~~Fv~~hp~~~~i~a~INlD~ 55 (717)
||+++|.|.+.+.++ +++ |.|+|+.+||. |+.|++.++++. +..+.+++|.
T Consensus 108 ~l~a~~~l~~~~~~~~~~~g~~~v~~~~~~~EE~~g~~G~~~~~~~~----~~d~~i~~d~ 164 (364)
T 2rb7_A 108 GLVMFRDRLNALKAAGRSQKDMALGLLITGDEEIGGMNGAAKALPLI----RADYVVALDG 164 (364)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCEEEEEESCGGGTSTTTHHHHGGGC----EEEEEEECSS
T ss_pred HHHHHHHHHHhCCCCcccCCCccEEEEEEeccccCchhhHHHHHhcC----CCCEEEEccC
Confidence 478899997654445 457 99999999997 789999999655 5667888774
No 40
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=88.80 E-value=0.37 Score=51.25 Aligned_cols=55 Identities=20% Similarity=0.183 Sum_probs=43.6
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCc--cchHHHHHhCCCccceeEEEEeccC
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGL--NGAHSFVTQHPWSTTIRVAVDLEAM 56 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GL--lGS~~Fv~~hp~~~~i~a~INlD~~ 56 (717)
+|+++|.|++ ..+++++|.|+|..+||.|. .|++.++++++..-+....++.|..
T Consensus 111 ~l~a~~~l~~-~~~~~~~v~~~~~~~EE~g~~~~G~~~~~~~~~~~~~~~~~i~~ep~ 167 (369)
T 3tx8_A 111 YLHTFATLAT-STELKHDLTLIAYECEEVADHLNGLGHIRDEHPEWLAADLALLGEPT 167 (369)
T ss_dssp HHHHHHHHTS-CTTCCSEEEEEEECCCSSCTTSCHHHHHHHHCGGGGCCSEEEECCCC
T ss_pred HHHHHHHHHh-hcCCCccEEEEEEeccccCcccccHHHHHHhcccccCCCEEEEeCCC
Confidence 4788999976 45678999999999999997 7999999887432355677777753
No 41
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=88.35 E-value=0.39 Score=52.02 Aligned_cols=51 Identities=22% Similarity=0.333 Sum_probs=40.8
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCccchHHHHHhCCCccceeEEEEe
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDL 53 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp~~~~i~a~INl 53 (717)
||+++|.|++.+.+++++|+|+|..+||. ..||+.++++. ..+.+.+++.+
T Consensus 131 ~l~a~~~l~~~~~~~~~~v~~~~~~~EE~-~~G~~~~~~~g-~~~~~d~~i~~ 181 (404)
T 1ysj_A 131 IIGTAMLLNQRRAELKGTVRFIFQPAEEI-AAGARKVLEAG-VLNGVSAIFGM 181 (404)
T ss_dssp HHHHHHHHHTCGGGCSSEEEEEEESCTTT-TCHHHHHHHTT-TTTTEEEEEEE
T ss_pred HHHHHHHHHhccccCCceEEEEEeccccc-chhHHHHHhcC-CCcCCCEEEEE
Confidence 47899999876667899999999999999 78999999643 34456666665
No 42
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=88.07 E-value=0.36 Score=53.07 Aligned_cols=52 Identities=25% Similarity=0.427 Sum_probs=42.0
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCccchHHHHHhCCCccceeEEEEec
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLE 54 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp~~~~i~a~INlD 54 (717)
+|++++.|++.+.+++.+|+|+|..+|| |..|++..+++ ...+++.+++.++
T Consensus 158 ~l~aa~~L~~~~~~~~g~v~l~f~p~EE-~~~Ga~~~i~~-g~~~~~d~~~~~h 209 (445)
T 3io1_A 158 GLGLAHVLKQYAAQLNGVIKLIFQPAEE-GTRGARAMVAA-GVVDDVDYFTAIH 209 (445)
T ss_dssp HHHHHHHHHHTGGGCCSEEEEEEESCTT-TTCHHHHHHHT-TTTTTCSEEEEEE
T ss_pred HHHHHHHHHhCcCcCCceEEEEEecccc-ccchHHHHHHc-CCccccceeEEEe
Confidence 4788999987667789999999999999 67899999954 3445677777665
No 43
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=86.58 E-value=0.36 Score=52.20 Aligned_cols=40 Identities=18% Similarity=0.255 Sum_probs=35.1
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCcccc-----CccchHHHHHh
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEE-----GLNGAHSFVTQ 40 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~-----GLlGS~~Fv~~ 40 (717)
+|+++|.|++.+.+++++|.|+|+.+||. |+.||+.++.+
T Consensus 98 ~l~~~~~l~~~~~~~~~~i~~~~~~~EE~~~~~~g~~Gs~~~~~~ 142 (408)
T 3n5f_A 98 GVEVVQTMNEHGVVTHHPIEVVAFTDEEGARFRFGMIGSRAMAGT 142 (408)
T ss_dssp HHHHHHHHHHTTCCCSSCEEEEEESCSSCTTTTCCCHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCCcCHHHHHcC
Confidence 47899999886777899999999999995 89999999843
No 44
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=86.06 E-value=0.49 Score=50.34 Aligned_cols=53 Identities=28% Similarity=0.436 Sum_probs=39.8
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCccchHHHHHhCCCccceeEEEEeccCC
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 57 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp~~~~i~a~INlD~~G 57 (717)
+|+++|.|.+.+ .++++|.|+|+.+||.|..||+.+..+.. +....+++|..+
T Consensus 116 ~l~a~~~l~~~~-~~~~~v~~~~~~~EE~g~~Ga~~~~~~~~---~~~~~~~~~~~~ 168 (373)
T 3gb0_A 116 MFEAIRVLKEKN-IPHGTIEFIITVGEESGLVGAKALDRERI---TAKYGYALDSDG 168 (373)
T ss_dssp HHHHHHHHHHTT-CCCCCEEEEEESCGGGTSHHHHHSCGGGC---CCSEEEEEEECS
T ss_pred HHHHHHHHHhcC-CCCCCEEEEEEeccccCchhhhhhCHHhc---CCCEEEEEcCCC
Confidence 478899998754 36899999999999999999999864321 345566666543
No 45
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=85.69 E-value=0.34 Score=53.01 Aligned_cols=51 Identities=14% Similarity=0.166 Sum_probs=40.7
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCccchHHHHHhCCCccceeEEEEecc
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEA 55 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp~~~~i~a~INlD~ 55 (717)
+|+++|+|.+.+..++++|.|+|+.+||.| .|++.+..+. -++.+.+++|.
T Consensus 174 ~l~a~~~L~~~~~~~~~~i~~if~~~EE~g-~Ga~~~~~~~---~~~d~~~~~d~ 224 (434)
T 3ife_A 174 IMVAMNYLIHNPQIKHGKIRVAFTPDEEIG-RGPAHFDVEA---FGASFAYMMDG 224 (434)
T ss_dssp HHHHHHHHHTCTTSCBCCEEEEEESCGGGT-CTGGGCCHHH---HCCSEEEECCC
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECCcccC-hHHHHhhhhh---cCCCEEEEecC
Confidence 478999998766778999999999999999 8998874221 14677888884
No 46
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=85.59 E-value=0.31 Score=52.86 Aligned_cols=51 Identities=18% Similarity=0.240 Sum_probs=39.9
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCccchHHHHHhCCCccceeEEEEeccC
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 56 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp~~~~i~a~INlD~~ 56 (717)
||+++|.|++.+ .++++|.|+|+.+||.| .|++.++++. . +..+.+++|..
T Consensus 148 ~l~a~~~l~~~~-~~~~~v~~~~~~~EE~g-~Ga~~~~~~~-~--~~d~~i~~d~~ 198 (417)
T 1fno_A 148 IMTALAVLKGNP-IPHGDIKVAFTPDEEVG-KGAKHFDVEA-F--GAQWAYTVDGG 198 (417)
T ss_dssp HHHHHHHHHSSS-CCCCCEEEEEESCGGGT-CTTTTCCHHH-H--CCSEEEECCCC
T ss_pred HHHHHHHHHhCC-CCCCcEEEEEEeccccC-CChhhhchhh-c--CCCEEEEeCCC
Confidence 578999998766 67899999999999999 9998776322 1 35567777764
No 47
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=85.05 E-value=0.28 Score=53.12 Aligned_cols=54 Identities=22% Similarity=0.163 Sum_probs=42.2
Q ss_pred hHHHHHHhcCCCCCCceEEEEecCccccC-ccchH-HHHHhCCCccceeEEEEeccC
Q 005039 2 LELARVMSQWAHEFKNAVIFLFNTGEEEG-LNGAH-SFVTQHPWSTTIRVAVDLEAM 56 (717)
Q Consensus 2 LElaR~l~~~~~~p~rtIiFlf~~aEE~G-LlGS~-~Fv~~hp~~~~i~a~INlD~~ 56 (717)
|..++.|++.+.+++++|.|+|+.+||.| ..||+ ..+++ ...+++.+++.+|..
T Consensus 103 l~aa~~L~~~~~~~~g~v~~~f~~~EE~~~~~Ga~~~~~~~-g~~~~~d~~~~~h~~ 158 (394)
T 3ram_A 103 VLGAIGLKQVIDQIGGKVVVLGCPAEEGGENGSAKASYVKA-GVIDQIDIALMIHPG 158 (394)
T ss_dssp HHHHHHHHTTHHHHCSEEEEEECCCTTCCTTCCHHHHHHHH-TGGGGCSEEECCEEE
T ss_pred HHHHHHHHHhHhhCCceEEEEEECCccCCCCCchHHHHHHc-CCcccCCEEEEECCc
Confidence 67788888655568899999999999999 59999 77754 334567888887653
No 48
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=84.05 E-value=0.55 Score=50.01 Aligned_cols=39 Identities=18% Similarity=0.220 Sum_probs=33.2
Q ss_pred CCceEEEEecCcccc-CccchHHHHHhCCCccceeEEEEeccC
Q 005039 15 FKNAVIFLFNTGEEE-GLNGAHSFVTQHPWSTTIRVAVDLEAM 56 (717)
Q Consensus 15 p~rtIiFlf~~aEE~-GLlGS~~Fv~~hp~~~~i~a~INlD~~ 56 (717)
++++|+|+|+.+||. |+.|++++++++. +..+++++|..
T Consensus 121 ~~~~v~~~~~~~EE~~g~~G~~~~~~~~~---~~d~~i~~e~~ 160 (369)
T 2f7v_A 121 GDGDAAFLFSSDEEANDPRCIAAFLARGL---PYDAVLVAEPT 160 (369)
T ss_dssp CCCCEEEEEESCTTSSSCCHHHHHHTTCC---CCSEEEECCCS
T ss_pred CCCCEEEEEEeCcccCCCcCHHHHHhcCC---CCCEEEECCCC
Confidence 789999999999999 9999999996654 56678888764
No 49
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=83.64 E-value=0.51 Score=52.33 Aligned_cols=39 Identities=15% Similarity=0.081 Sum_probs=34.7
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCcccc-----CccchHHHHH
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEE-----GLNGAHSFVT 39 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~-----GLlGS~~Fv~ 39 (717)
+|+++|.|.+.+.+++++|.|+|+.+||. |+.||+.+..
T Consensus 132 ~L~a~~~L~~~~~~~~~~v~lif~~dEE~~~~~~g~~Gs~~l~~ 175 (474)
T 2v8h_A 132 GLEVLRTFKDNNYVPNYDVCVVVWFNAEGARFARSCTGSSVWSH 175 (474)
T ss_dssp HHHHHHHHHHHTCCCSSCEEEEECTTCSCSSSSCTTHHHHHHTT
T ss_pred HHHHHHHHHHcCCCCCCCEEEEEECCccCCCCCCCcccHHHHHh
Confidence 47899999876778899999999999998 8899999974
No 50
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=82.45 E-value=0.77 Score=49.28 Aligned_cols=55 Identities=15% Similarity=0.178 Sum_probs=40.0
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCcccc-CccchHHHHHhCCC-ccceeEEEEecc
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEE-GLNGAHSFVTQHPW-STTIRVAVDLEA 55 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~-GLlGS~~Fv~~hp~-~~~i~a~INlD~ 55 (717)
||+.++.+.+.+.+++++|+|+|+.+||. |+.|++.+++.... ..++.+++..|.
T Consensus 111 ~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~Ga~~~~~~~~~~~~~~d~~i~~e~ 167 (393)
T 1vgy_A 111 FVTACERFVAKHPNHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYCIVGEP 167 (393)
T ss_dssp HHHHHHHHHHHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHTTCCEEEEEECCC
T ss_pred HHHHHHHHHHhcCCCCCcEEEEEEeccccCCcCCHHHHHHHHHhcCcCCCEEEEeCC
Confidence 47888888765667899999999999998 47999988753211 124556665554
No 51
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=80.83 E-value=0.94 Score=48.70 Aligned_cols=52 Identities=25% Similarity=0.383 Sum_probs=38.5
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCccchHHHHHhCCCccceeEEEEeccC
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 56 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp~~~~i~a~INlD~~ 56 (717)
+|+++|.|.+.+ .++++|.|+|..+||.|..||+.+..+.. +....+++|..
T Consensus 137 ~l~a~~~l~~~~-~~~~~v~~~~~~~EE~g~~Ga~~~~~~~~---~~~~~~~~~~~ 188 (396)
T 3rza_A 137 MLEVLQVIKEQQ-IPHGQIQFVITVGEESGLIGAKELNSELL---DADFGYAIDAS 188 (396)
T ss_dssp HHHHHHHHHHHT-CCCCCEEEEEESCGGGTSHHHHHCCGGGC---CCSEEEEEEES
T ss_pred HHHHHHHHHhcC-CCCCCEEEEEEcccccccHhHhhhchhhc---ccceEEEEecC
Confidence 478889987654 36799999999999999999999874322 23455566653
No 52
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=80.17 E-value=0.65 Score=50.30 Aligned_cols=39 Identities=10% Similarity=-0.073 Sum_probs=34.1
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCcccc-----CccchHHHHH
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEE-----GLNGAHSFVT 39 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~-----GLlGS~~Fv~ 39 (717)
+|+++|.|++.+.+++++|+|+|+.+||. |+.||+.+..
T Consensus 102 ~l~a~~~l~~~~~~~~~~v~~i~~~~EE~~~~~~g~~Gs~~~~~ 145 (423)
T 1z2l_A 102 AWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFG 145 (423)
T ss_dssp HHHHHHHHHHHHCSCSEEEEEEEESCSSCCSSSCSCHHHHHHTT
T ss_pred HHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCcccHHHHHc
Confidence 47889999876677899999999999998 6889999985
No 53
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=74.34 E-value=1.9 Score=45.39 Aligned_cols=55 Identities=18% Similarity=0.159 Sum_probs=38.7
Q ss_pred ChHHHHHHhcCCCCCCceEEEEecCccccCc-cchHHHHHhCCC-ccceeEEEEecc
Q 005039 1 MLELARVMSQWAHEFKNAVIFLFNTGEEEGL-NGAHSFVTQHPW-STTIRVAVDLEA 55 (717)
Q Consensus 1 mLElaR~l~~~~~~p~rtIiFlf~~aEE~GL-lGS~~Fv~~hp~-~~~i~a~INlD~ 55 (717)
||+.++.+.+.+.+++++|.|+|..+||.|. .||+.+++.... ..++.+++..|.
T Consensus 108 ~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~~~~e~ 164 (377)
T 3isz_A 108 MIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCMVGEP 164 (377)
T ss_dssp HHHHHHHHHHHCTTCSSEEEEEEESCSSSCCSSSHHHHHHHHHHTTCCCCEEEECCC
T ss_pred HHHHHHHHHHhCCCCCceEEEEEEcccccCccccHHHHHHHHHhcCCCCCEEEEcCC
Confidence 3677777766566789999999999999986 699998753211 123555565553
No 54
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=73.54 E-value=1.6 Score=48.55 Aligned_cols=42 Identities=14% Similarity=0.192 Sum_probs=33.8
Q ss_pred CCCCCceEEEEecCccccCccchHHHHHhCCCccceeEEEEeccC
Q 005039 12 AHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 56 (717)
Q Consensus 12 ~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp~~~~i~a~INlD~~ 56 (717)
...++.+|.|+|..+||.|+.|++.++++ .. +.+..+|+|..
T Consensus 134 ~~~~~~~v~~~~~~~EE~g~~Ga~~~~~~-~~--~~~~~~~~d~~ 175 (490)
T 3mru_A 134 KEIKHGPIEVLLTIDEEAGMTGAFGLEAG-WL--KGDILLNTDSE 175 (490)
T ss_dssp SSCCCCSEEEEEESCSSSTTGGGGTCCSS-SC--CSSEEEECCCC
T ss_pred CCCCCCCEEEEEEcccccccHhHHHhhhc-cc--CCCEEEEcCCC
Confidence 44568899999999999999999999843 22 46788999964
No 55
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=65.32 E-value=3.4 Score=45.72 Aligned_cols=41 Identities=15% Similarity=0.229 Sum_probs=32.8
Q ss_pred CCCceEEEEecCccccCccchHHHHHhCCCccceeEEEEeccCC
Q 005039 14 EFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 57 (717)
Q Consensus 14 ~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp~~~~i~a~INlD~~G 57 (717)
.++++|.|+|..+||.|+.||+.++++. . +..+.+++|..+
T Consensus 133 ~~~~~v~~~~~~~EE~g~~Ga~~~~~~~-~--~~d~~~~~d~~~ 173 (487)
T 2qyv_A 133 IAHPELEVLLTMTEERGMEGAIGLRPNW-L--RSEILINTDTEE 173 (487)
T ss_dssp SCCSSEEEEEESCTTTTCHHHHTCCSSC-C--CCSEEEECCCCC
T ss_pred CCCCCEEEEEEeccccCCHHHHHHHHhc-c--CCCEEEEEccCC
Confidence 4678999999999999999999988533 2 366778888753
No 56
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=62.29 E-value=13 Score=40.93 Aligned_cols=126 Identities=13% Similarity=0.066 Sum_probs=70.3
Q ss_pred hHHHHHHhcCCCCCCceEEEEecCccccCccchHHHHHhCCCccc----e-------------eEEEEeccCCCC-----
Q 005039 2 LELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTT----I-------------RVAVDLEAMGIG----- 59 (717)
Q Consensus 2 LElaR~l~~~~~~p~rtIiFlf~~aEE~GLlGS~~Fv~~hp~~~~----i-------------~a~INlD~~G~g----- 59 (717)
||.++.+. +.+.++.++| +-||.|..|+++-. .+..++ + ..+|-.|++-+.
T Consensus 244 l~al~~~~----~~~~~v~~~f-d~EEVGs~ga~gA~--s~~~~~~l~ri~~~~~~~~~~~~~s~~is~Dv~ha~~Pn~~ 316 (428)
T 2ijz_A 244 LEALLNAE----GDENCILVCT-DHEEVGSCSHCGAD--GPFLEQVLRRLLPEGDAFSRAIQRSLLVSADNAHGVHPNYA 316 (428)
T ss_dssp TTHHHHTT----SCSSSCEEEE-CBSCTTTTCHHHHS--SCCTTTSCCSSSSSSSSSTTTTTSCCEEEECCCCCCCSSCG
T ss_pred HHHHHhcc----cCCceEEEEE-eccccCccchhhhh--ccccHHHHHHhhhhhhHHHhhhhcCEEEEEecccccCCCCc
Confidence 55555543 4567888888 99999999998754 322221 1 567777765431
Q ss_pred -------------CcceEEEeC----CChHHHHHHHH---hcCCCCCccccccccccCCCCCCCChHhhhh-cCCCcEEE
Q 005039 60 -------------GRSALFQAG----PNLWAVENFAA---VAKYPSGQIIGQDLFASGVFETATDFQVYTE-VAGLSGLD 118 (717)
Q Consensus 60 -------------G~~~lf~~g----~~~~L~~~y~~---~a~~P~~~~~~~~~f~~g~ipsdTD~~~F~~-~~GIPgLd 118 (717)
|..+....+ +++.+...+.+ .+.-|+-. ++.+ ...+.+||-.++.. ..|||.+|
T Consensus 317 ~~~~~~~~~~lg~G~vIk~~~~~~~~~~~~~~~~l~~~a~~~~Ip~Q~----~~~~-~d~~gGsd~g~i~~~~~Gi~tvd 391 (428)
T 2ijz_A 317 DRHDANHGPALNGGPVIKINSNQRYATNSETAGFFRHLCQDSEVPVQS----FVTR-SDMGCGSTIGPITASQVGVRTVD 391 (428)
T ss_dssp GGCCSSCCCSSSCCCBCCCCSSSCCSCCHHHHTTTTHHHHHTCCCCCB----CCCC-SSCCCCCCCSTTTGGGGSCCEEE
T ss_pred ccccccCCcccCCCcEEEEECCCCCCCCHHHHHHHHHHHHHcCCCeEE----EEEe-CCCCccchHHHHHHhCCCCCEEE
Confidence 222222111 24544433322 22334321 2222 12456788777643 48999999
Q ss_pred EeeeCCCCCCCCCCCCcCCCCHh
Q 005039 119 FAYTDKSAVYHTKNDRLDLLKPG 141 (717)
Q Consensus 119 ~a~~~~~~~YHT~~Dt~d~i~~~ 141 (717)
+.. +--.-||++-....-|..
T Consensus 392 iGi--p~~~mHS~~E~~~~~D~~ 412 (428)
T 2ijz_A 392 IGL--PTFAMHSIRELAGSHDLA 412 (428)
T ss_dssp ECC--CCCSCSSSSCCCCSSHHH
T ss_pred Ech--hhcccchHHHHhhHHHHH
Confidence 843 335669988766654443
No 57
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=61.85 E-value=13 Score=31.05 Aligned_cols=59 Identities=17% Similarity=0.224 Sum_probs=46.7
Q ss_pred CCCCCChHhhhhcCCCcEEEEeeeCC-CCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHHHhcCC
Q 005039 99 FETATDFQVYTEVAGLSGLDFAYTDK-SAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASST 161 (717)
Q Consensus 99 ipsdTD~~~F~~~~GIPgLd~a~~~~-~~~YHT~~Dt~d~i~~~slq~~g~~~l~lv~~la~~~ 161 (717)
.++.||-+.|.+ .|+|.+-+.-... ...-|++. |+++.+.+.+..+....+++.+.+.+
T Consensus 23 ~~g~TDar~~~~-~gip~v~fGPg~~~~~~~H~~d---E~v~i~~l~~~~~iy~~~i~~~~~~~ 82 (88)
T 1q7l_B 23 MPAAGDNRYIRA-VGVPALGFSPMNRTPVLLHDHD---ERLHEAVFLRGVDIYTRLLPALASVP 82 (88)
T ss_dssp CCSCSHHHHHHH-TTCCEEEECCCCSCCCCTTSTT---CEEEHHHHHHHHHHHHHHHHHHHTCC
T ss_pred eceeCcHHHHHH-cCCCEEEECCCCCCcccccCCC---CeeEHHHHHHHHHHHHHHHHHHHcCC
Confidence 578999999998 7999987653321 13568775 67889999999999999999998763
No 58
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=40.86 E-value=63 Score=35.61 Aligned_cols=51 Identities=8% Similarity=-0.048 Sum_probs=31.6
Q ss_pred CCCCCChHhhhhcCCCcEEEEeeeCCCCCCCCCCCCcCCCCHhHHHHHHHHHHHHH
Q 005039 99 FETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFL 154 (717)
Q Consensus 99 ipsdTD~~~F~~~~GIPgLd~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~~l~lv 154 (717)
.+++||-.++....|||.+|+.. +--.-||+.-+...-| +.++.+.+.+++
T Consensus 397 ~~gGstig~i~a~~Gi~tvdiGi--P~l~MHS~~E~~~~~D---~~~~~~l~~af~ 447 (450)
T 2glf_A 397 QGGGGTIAKFFAERGSDVIDMGP--ALLGMHSPFEISSKAD---LFETYVAYRSLM 447 (450)
T ss_dssp SCCCCCTHHHHHTTTSCEEEEEC--EEBSTTSSSEEEEHHH---HHHHHHHHHHHH
T ss_pred CCCCCcHHHHHhCCCCcEEEech--hhcccchHHHHhhHHH---HHHHHHHHHHHH
Confidence 45677766665558999999853 2245699987766433 444444444443
No 59
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=36.79 E-value=33 Score=34.04 Aligned_cols=57 Identities=14% Similarity=0.089 Sum_probs=44.3
Q ss_pred CCCCCChHhhhh-cCCCcEEEEeeeCCCCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHHHhcC
Q 005039 99 FETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASS 160 (717)
Q Consensus 99 ipsdTD~~~F~~-~~GIPgLd~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~~l~lv~~la~~ 160 (717)
.+.+||-..|.. ..|+|.+.+.-- .. ..||+. |+++.+.+.+..+.+.++++.|...
T Consensus 293 ~~ggTDa~~~~~~~~Giptv~~G~g-~~-~~Ht~~---E~v~i~dl~~~~~ll~~~i~~L~~~ 350 (354)
T 2wzn_A 293 RPTGTDANVMQINKEGVATAVLSIP-IR-YMHSQV---ELADARDVDNTIKLAKALLEELKPM 350 (354)
T ss_dssp SCCSSHHHHHHTSTTCCEEEEEEEE-EB-STTSTT---CEEEHHHHHHHHHHHHHHHHHCCCC
T ss_pred cccccHHHHHHHhcCCCCEEEECcc-cC-CCCccc---EEEEHHHHHHHHHHHHHHHHhCccc
Confidence 357899887653 279999988653 33 369986 7888999999999999999998654
No 60
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=36.54 E-value=59 Score=25.31 Aligned_cols=7 Identities=43% Similarity=1.256 Sum_probs=4.3
Q ss_pred CCCCccc
Q 005039 416 GGTPEWL 422 (717)
Q Consensus 416 ~~~Pd~~ 422 (717)
..+|-|+
T Consensus 5 ~~vp~Wi 11 (54)
T 2l8s_A 5 GRVPLWV 11 (54)
T ss_dssp CCCCTHH
T ss_pred ccCchHH
Confidence 4477773
No 61
>2lx0_A Membrane fusion protein P14; membrane fusion protein transmembrane domain, P14 fast prote ARCH, micelle-peptide complex, membrane protein; NMR {Synthetic}
Probab=34.04 E-value=38 Score=22.66 Aligned_cols=18 Identities=17% Similarity=0.383 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 005039 425 VIFAVVIAVVSCLTLVYL 442 (717)
Q Consensus 425 ~iIA~l~al~t~l~~~fl 442 (717)
-+||.++|+.+.+.++|-
T Consensus 7 eviaglvalltflafgfw 24 (32)
T 2lx0_A 7 EVIAGLVALLTFLAFGFW 24 (32)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 478999999999999984
No 62
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=30.15 E-value=56 Score=34.11 Aligned_cols=52 Identities=17% Similarity=0.254 Sum_probs=40.4
Q ss_pred CCCCChHhhhhcCCCcEEEEeeeCCCCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHHH
Q 005039 100 ETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQT 157 (717)
Q Consensus 100 psdTD~~~F~~~~GIPgLd~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~~l~lv~~l 157 (717)
+.+||+..|.+ .|+|++.+.. + ...-|++. ++++.+.+....+.+..+++.+
T Consensus 320 ~g~~D~~~~~~-~gip~~~~g~-~-~~~~H~~~---E~i~~~~l~~~~~~~~~~l~~l 371 (373)
T 3gb0_A 320 GGGSDANVIAG-HGIPTVNLAV-G-YEEIHTTN---EKIPVEELAKTAELVVAIIEEV 371 (373)
T ss_dssp SSCCHHHHHHH-TTCCEEEEEC-C-CBSTTSTT---CEEEHHHHHHHHHHHHHHHHHH
T ss_pred cCcchHHHHHh-CCCCEEEecC-C-CCcCcCCc---eEEEHHHHHHHHHHHHHHHHHh
Confidence 56899999988 7999986543 2 23578876 5778899999888888888776
No 63
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=27.16 E-value=35 Score=36.55 Aligned_cols=56 Identities=14% Similarity=0.143 Sum_probs=43.2
Q ss_pred CCCCChHhhhhcCCCcEEEEeeeCCCCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHHHhcC
Q 005039 100 ETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASS 160 (717)
Q Consensus 100 psdTD~~~F~~~~GIPgLd~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~~l~lv~~la~~ 160 (717)
+..||...|.+..|+|++.+.- .....|++. ++++.+.+....+.+..++..+.+.
T Consensus 375 ~g~~D~~~~~~~~giP~v~~Gp--~~~~~H~~~---E~i~~~~l~~~~~~~~~~i~~~~~~ 430 (433)
T 3pfo_A 375 TAVNDTRYYSVDYGIPALCYGP--YGQGPHAFD---ERIDLESLRKTTLSIALFVAEWCGL 430 (433)
T ss_dssp SSCCTHHHHHHTTCCCEEECCC--CEECTTSTT---CEEEHHHHHHHHHHHHHHHHHHHCE
T ss_pred eeeccHHHHHhhCCCCEEEECC--CCccCCCCC---ceEEHHHHHHHHHHHHHHHHHHhcc
Confidence 5689999998756999985432 235678876 5677899999999999999888764
No 64
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=23.82 E-value=69 Score=33.84 Aligned_cols=55 Identities=18% Similarity=0.232 Sum_probs=42.8
Q ss_pred CCCCChHhhhhcCCCcEEEEeeeCCCCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHHHhcC
Q 005039 100 ETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASS 160 (717)
Q Consensus 100 psdTD~~~F~~~~GIPgLd~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~~l~lv~~la~~ 160 (717)
+.+||+..|.+ .|+|++.+.. + ...-|++. ++++.+.+....+.+..++..++..
T Consensus 340 ~g~tD~~~~~~-~giP~~~~g~-g-~~~~H~~~---E~v~~~~l~~~~~~~~~~~~~l~~~ 394 (396)
T 3rza_A 340 GGGSDGSIINT-FGIPSVILGV-G-YEKIHTTN---ERMPIKSLNLLASQVLEIIKIVARQ 394 (396)
T ss_dssp SSCCHHHHHGG-GTCCEEEEEC-C-CBSTTSTT---CEEEHHHHHHHHHHHHHHHHHHHHC
T ss_pred ceeccHHHHhh-CCCcEEEECC-C-CCCCCCCc---ceeEHHHHHHHHHHHHHHHHHHHHh
Confidence 56899999987 7999987543 2 24578876 4567899999999999999998753
No 65
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=22.68 E-value=45 Score=35.28 Aligned_cols=56 Identities=11% Similarity=0.088 Sum_probs=41.3
Q ss_pred CCCCCChHhhhhcCCCcEEEEeeeCCCCCCCC-CCCCcCCCCHhHHHHHHHHHHHHHHHHhc
Q 005039 99 FETATDFQVYTEVAGLSGLDFAYTDKSAVYHT-KNDRLDLLKPGSLQHLGENMLDFLLQTAS 159 (717)
Q Consensus 99 ipsdTD~~~F~~~~GIPgLd~a~~~~~~~YHT-~~Dt~d~i~~~slq~~g~~~l~lv~~la~ 159 (717)
.+.+||...|.+ .|+|++. .+.......|+ +. ++++.+.+....+.+..++..+++
T Consensus 335 ~~g~tD~~~~~~-~giP~~~-~~G~~~~~~H~~~~---E~i~~~~l~~~~~~~~~~~~~l~~ 391 (393)
T 1cg2_A 335 TGGGTDAAYAAL-SGKPVIE-SLGLPGFGYHSDKA---EYVDISAIPRRLYMAARLIMDLGA 391 (393)
T ss_dssp BSCCCTHHHHGG-GSCCEEC-CCSCEEECTTSSSC---CEEEGGGHHHHHHHHHHHHHHHHC
T ss_pred CCcccHHHHHHh-CCCCEEE-eCCCCCCCccCCCc---ceEEehhHHHHHHHHHHHHHHHhc
Confidence 356799999988 7899973 22212245688 65 567788899989999999988875
No 66
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=22.20 E-value=54 Score=35.28 Aligned_cols=55 Identities=13% Similarity=0.150 Sum_probs=42.3
Q ss_pred CCCCCChHhhhhcCCCcEEEEeeeCCCCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHHHhc
Q 005039 99 FETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 159 (717)
Q Consensus 99 ipsdTD~~~F~~~~GIPgLd~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~~l~lv~~la~ 159 (717)
...+||...|.+ .|+|++.+.. + ....|++. ++++.+.+....+.+..++..+++
T Consensus 378 ~~ggtD~~~~~~-~GiP~~~~g~-g-~~~~H~~~---E~i~~~~l~~~~~~~~~~l~~la~ 432 (434)
T 3ife_A 378 IRGGTDGSQLSY-MGLPTPNIFT-G-GENYHGKF---EYVSVDVMEKAVQVIIEIARRFEE 432 (434)
T ss_dssp BSSCCHHHHHHH-TTCCCCEECC-S-EESTTSTT---CEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCchHHHHhh-CCCcEEEeCC-C-CCCCcCCc---eeecHHHHHHHHHHHHHHHHHHhh
Confidence 356899999988 8999875432 2 23678876 556789999999999999988875
No 67
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=21.59 E-value=68 Score=34.14 Aligned_cols=59 Identities=15% Similarity=0.153 Sum_probs=43.8
Q ss_pred CCCCCChHhhhhcCCCcEEEEeeeCCCCCCCCCCCCcCCCCHhHHHHHHHHHHHHHHHHhcCCCC
Q 005039 99 FETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASSTSI 163 (717)
Q Consensus 99 ipsdTD~~~F~~~~GIPgLd~a~~~~~~~YHT~~Dt~d~i~~~slq~~g~~~l~lv~~la~~~~l 163 (717)
.+.+||...|.+ .|+|++.+.-. ...-|++. ++++.+.+....+.+..++..+.....+
T Consensus 352 ~~ggtD~~~~~~-~gip~v~~G~~--~~~~H~~~---E~i~~~~l~~~~~~~~~~~~~~~~~~~~ 410 (417)
T 1fno_A 352 IRGGTDGAQLSF-MGLPCPNLFTG--GYNYHGKH---EFVTLEGMEKAVQVIVRIAELTAKRGQL 410 (417)
T ss_dssp BSSCCHHHHHTT-TTCCCCEECCS--EESTTSTT---CEEEHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred ceeccchHhHHh-cCCCEEEEcCC--CCCCCCcc---cccCHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 456899999987 78998855321 12468876 5577899999999999999999876554
No 68
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=20.76 E-value=1.7e+02 Score=22.70 Aligned_cols=6 Identities=33% Similarity=0.999 Sum_probs=3.6
Q ss_pred CCCCcc
Q 005039 416 GGTPEW 421 (717)
Q Consensus 416 ~~~Pd~ 421 (717)
...|-|
T Consensus 8 ~~vp~w 13 (54)
T 2knc_A 8 RAIPIW 13 (54)
T ss_dssp TTCCHH
T ss_pred CCcchH
Confidence 346766
Done!