Query 005040
Match_columns 717
No_of_seqs 630 out of 5325
Neff 9.8
Searched_HMMs 46136
Date Thu Mar 28 17:04:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005040.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005040hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1.1E-82 2.4E-87 761.2 52.8 674 2-709 250-955 (968)
2 KOG1187 Serine/threonine prote 100.0 4.8E-51 1E-55 423.6 25.2 289 413-707 61-354 (361)
3 KOG0581 Mitogen-activated prot 100.0 1.2E-48 2.6E-53 380.3 18.4 255 426-701 78-335 (364)
4 KOG0192 Tyrosine kinase specif 100.0 5.6E-47 1.2E-51 389.7 23.9 262 427-712 41-310 (362)
5 KOG0197 Tyrosine kinases [Sign 100.0 5.6E-47 1.2E-51 386.5 15.9 258 427-709 206-465 (468)
6 KOG0575 Polo-like serine/threo 100.0 4E-46 8.7E-51 383.6 20.8 247 427-700 18-268 (592)
7 KOG0595 Serine/threonine-prote 100.0 5.7E-46 1.2E-50 364.4 19.7 200 426-633 9-217 (429)
8 KOG0615 Serine/threonine prote 100.0 3.2E-46 6.9E-51 365.3 16.2 253 425-700 170-436 (475)
9 KOG0591 NIMA (never in mitosis 100.0 1.4E-46 3E-51 349.5 9.6 258 426-703 18-283 (375)
10 KOG0598 Ribosomal protein S6 k 100.0 1.9E-44 4.1E-49 351.1 16.1 243 426-694 24-270 (357)
11 KOG0593 Predicted protein kina 100.0 3.1E-44 6.6E-49 337.4 15.9 265 427-700 2-283 (396)
12 KOG1026 Nerve growth factor re 100.0 7.8E-44 1.7E-48 381.1 18.8 263 425-710 484-767 (774)
13 KOG0661 MAPK related serine/th 100.0 5.7E-44 1.2E-48 355.6 12.2 267 425-701 8-291 (538)
14 KOG0659 Cdk activating kinase 100.0 7.6E-43 1.7E-47 322.7 17.9 267 427-701 2-281 (318)
15 KOG0592 3-phosphoinositide-dep 100.0 3.2E-43 6.9E-48 355.7 16.8 254 423-701 69-338 (604)
16 KOG0600 Cdc2-related protein k 100.0 4.6E-43 1E-47 351.7 16.1 266 426-700 116-399 (560)
17 KOG0193 Serine/threonine prote 100.0 6.3E-43 1.4E-47 357.8 16.0 263 424-708 389-656 (678)
18 KOG0198 MEKK and related serin 100.0 1.7E-42 3.7E-47 344.9 18.3 256 427-703 17-278 (313)
19 KOG0196 Tyrosine kinase, EPH ( 100.0 3.5E-43 7.6E-48 367.8 9.5 269 415-707 608-893 (996)
20 KOG0578 p21-activated serine/t 100.0 3.9E-42 8.5E-47 351.3 15.0 248 427-701 273-523 (550)
21 KOG0616 cAMP-dependent protein 100.0 1.5E-41 3.1E-46 318.9 17.3 237 427-693 44-284 (355)
22 KOG0582 Ste20-like serine/thre 100.0 4.4E-41 9.5E-46 332.4 20.9 260 427-700 26-292 (516)
23 KOG0605 NDR and related serine 100.0 2.2E-41 4.8E-46 342.9 18.9 254 424-699 138-443 (550)
24 cd05102 PTKc_VEGFR3 Catalytic 100.0 5E-41 1.1E-45 354.1 21.6 261 425-707 5-336 (338)
25 KOG1095 Protein tyrosine kinas 100.0 1.4E-41 3E-46 377.2 17.6 264 427-713 692-969 (1025)
26 KOG0583 Serine/threonine prote 100.0 7.6E-41 1.7E-45 348.0 20.5 249 424-699 14-273 (370)
27 KOG0194 Protein tyrosine kinas 100.0 2.2E-41 4.7E-46 351.8 16.0 259 428-711 158-426 (474)
28 KOG3653 Transforming growth fa 100.0 1.9E-40 4.1E-45 330.2 20.9 279 427-711 210-509 (534)
29 KOG0597 Serine-threonine prote 100.0 3.2E-41 6.9E-46 341.1 15.6 246 427-700 2-250 (808)
30 KOG0663 Protein kinase PITSLRE 100.0 1.3E-40 2.8E-45 317.2 15.2 266 425-700 74-360 (419)
31 KOG4721 Serine/threonine prote 100.0 5.1E-41 1.1E-45 339.3 12.3 241 431-705 128-368 (904)
32 PHA02988 hypothetical protein; 100.0 1.1E-39 2.3E-44 334.1 21.5 248 432-707 25-281 (283)
33 cd05096 PTKc_DDR1 Catalytic do 100.0 1.7E-39 3.6E-44 337.2 22.9 263 426-704 4-304 (304)
34 PLN00113 leucine-rich repeat r 100.0 1.4E-39 3.1E-44 389.7 25.3 337 2-347 226-586 (968)
35 KOG0694 Serine/threonine prote 100.0 1.8E-40 3.8E-45 345.8 14.7 244 424-695 365-613 (694)
36 KOG0580 Serine/threonine prote 100.0 2.5E-40 5.4E-45 301.7 13.3 248 426-701 21-273 (281)
37 KOG0201 Serine/threonine prote 100.0 5.6E-41 1.2E-45 331.8 9.5 249 427-701 13-263 (467)
38 cd05104 PTKc_Kit Catalytic dom 100.0 2.6E-39 5.7E-44 344.4 23.2 257 426-704 34-373 (375)
39 KOG0588 Serine/threonine prote 100.0 4E-40 8.7E-45 340.1 15.7 248 426-701 11-263 (786)
40 cd05106 PTKc_CSF-1R Catalytic 100.0 4.1E-39 8.9E-44 342.5 23.1 259 426-706 37-373 (374)
41 KOG0660 Mitogen-activated prot 100.0 1.5E-39 3.3E-44 315.4 17.9 269 425-701 20-310 (359)
42 KOG0033 Ca2+/calmodulin-depend 100.0 1.9E-41 4.1E-46 309.0 3.9 251 426-700 10-266 (355)
43 KOG0599 Phosphorylase kinase g 100.0 4.4E-40 9.5E-45 304.6 12.6 252 426-701 16-283 (411)
44 cd05631 STKc_GRK4 Catalytic do 100.0 8.3E-39 1.8E-43 328.5 23.1 249 429-700 2-260 (285)
45 KOG1094 Discoidin domain recep 100.0 9.1E-40 2E-44 331.7 15.2 265 425-705 536-804 (807)
46 cd07869 STKc_PFTAIRE1 Catalyti 100.0 5.2E-39 1.1E-43 333.2 20.6 268 426-700 4-287 (303)
47 PF07714 Pkinase_Tyr: Protein 100.0 1.2E-39 2.6E-44 329.6 14.8 249 431-702 3-259 (259)
48 cd05064 PTKc_EphR_A10 Catalyti 100.0 5.9E-39 1.3E-43 326.2 19.9 256 426-705 4-265 (266)
49 cd06649 PKc_MEK2 Catalytic dom 100.0 1.6E-38 3.4E-43 333.4 23.5 265 426-701 4-301 (331)
50 KOG2345 Serine/threonine prote 100.0 1.4E-39 3.1E-44 298.0 13.4 265 423-705 17-300 (302)
51 KOG0589 Serine/threonine prote 100.0 1E-39 2.2E-44 332.6 13.8 250 427-701 4-258 (426)
52 cd05612 STKc_PRKX_like Catalyt 100.0 5.1E-39 1.1E-43 331.0 19.1 245 427-701 1-254 (291)
53 cd07871 STKc_PCTAIRE3 Catalyti 100.0 8.4E-39 1.8E-43 328.9 20.3 264 427-700 5-284 (288)
54 cd05108 PTKc_EGFR Catalytic do 100.0 9E-39 2E-43 333.4 20.7 259 427-709 7-272 (316)
55 cd05048 PTKc_Ror Catalytic Dom 100.0 1.9E-38 4.1E-43 325.9 22.8 256 427-705 5-283 (283)
56 PTZ00263 protein kinase A cata 100.0 5.1E-39 1.1E-43 336.7 18.8 244 427-700 18-270 (329)
57 cd05571 STKc_PKB Catalytic dom 100.0 9.1E-39 2E-43 334.0 20.7 241 433-700 1-250 (323)
58 KOG0611 Predicted serine/threo 100.0 2E-39 4.4E-44 315.4 14.4 246 426-700 52-302 (668)
59 KOG0585 Ca2+/calmodulin-depend 100.0 2.1E-39 4.4E-44 322.5 14.8 257 423-702 93-373 (576)
60 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.1E-38 2.4E-43 335.2 21.0 253 427-701 1-257 (333)
61 cd05033 PTKc_EphR Catalytic do 100.0 2.2E-38 4.7E-43 322.3 22.4 257 426-705 3-265 (266)
62 KOG0658 Glycogen synthase kina 100.0 1.3E-39 2.9E-44 316.4 12.5 262 426-700 23-305 (364)
63 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.4E-38 5.2E-43 337.6 22.9 259 426-706 36-398 (400)
64 KOG0610 Putative serine/threon 100.0 1.3E-38 2.9E-43 312.5 18.9 252 427-700 77-391 (459)
65 KOG0594 Protein kinase PCTAIRE 100.0 1.4E-38 3E-43 310.4 18.4 268 426-701 10-302 (323)
66 cd05093 PTKc_TrkB Catalytic do 100.0 6.8E-38 1.5E-42 322.4 24.5 260 426-708 4-282 (288)
67 KOG1989 ARK protein kinase fam 100.0 9.2E-39 2E-43 344.1 18.7 257 427-707 37-313 (738)
68 cd05114 PTKc_Tec_Rlk Catalytic 100.0 5.3E-38 1.1E-42 317.5 23.2 251 427-702 4-255 (256)
69 cd05111 PTK_HER3 Pseudokinase 100.0 3.4E-38 7.3E-43 323.0 21.5 258 427-708 7-271 (279)
70 cd05084 PTKc_Fes Catalytic dom 100.0 3.2E-38 6.9E-43 318.3 20.9 248 433-703 1-251 (252)
71 cd07848 STKc_CDKL5 Catalytic d 100.0 1.5E-38 3.3E-43 327.3 18.9 267 427-700 1-283 (287)
72 cd05585 STKc_YPK1_like Catalyt 100.0 2.1E-38 4.5E-43 329.7 20.1 237 435-698 1-241 (312)
73 PTZ00426 cAMP-dependent protei 100.0 1.5E-38 3.2E-43 333.7 18.9 246 426-701 29-284 (340)
74 KOG4257 Focal adhesion tyrosin 100.0 8.7E-39 1.9E-43 326.4 16.4 258 425-707 387-651 (974)
75 cd05595 STKc_PKB_beta Catalyti 100.0 3.2E-38 7E-43 329.7 21.3 241 433-700 1-250 (323)
76 KOG2052 Activin A type IB rece 100.0 8E-38 1.7E-42 309.2 22.7 276 418-707 202-505 (513)
77 cd05049 PTKc_Trk Catalytic dom 100.0 5.7E-38 1.2E-42 321.9 22.5 256 426-704 4-280 (280)
78 PTZ00267 NIMA-related protein 100.0 2.9E-38 6.3E-43 346.5 21.5 250 428-700 68-322 (478)
79 cd06650 PKc_MEK1 Catalytic dom 100.0 4.6E-38 9.9E-43 329.9 22.0 199 426-632 4-204 (333)
80 cd05148 PTKc_Srm_Brk Catalytic 100.0 3.9E-38 8.4E-43 319.5 20.0 256 425-705 4-261 (261)
81 cd05072 PTKc_Lyn Catalytic dom 100.0 7.9E-38 1.7E-42 317.2 22.1 255 426-705 5-261 (261)
82 cd08228 STKc_Nek6 Catalytic do 100.0 1.2E-37 2.6E-42 317.1 23.4 258 427-706 2-266 (267)
83 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 7E-38 1.5E-42 321.8 21.8 270 427-705 4-283 (284)
84 cd05593 STKc_PKB_gamma Catalyt 100.0 5E-38 1.1E-42 328.8 20.9 242 433-701 1-251 (328)
85 cd05094 PTKc_TrkC Catalytic do 100.0 1.5E-37 3.3E-42 320.3 24.3 261 427-710 5-287 (291)
86 cd05054 PTKc_VEGFR Catalytic d 100.0 7E-38 1.5E-42 328.6 21.8 260 426-707 6-335 (337)
87 cd07859 STKc_TDY_MAPK_plant Ca 100.0 9E-38 1.9E-42 329.6 22.1 266 428-701 1-290 (338)
88 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.3E-37 2.8E-42 314.5 22.3 252 427-703 4-256 (256)
89 cd05062 PTKc_IGF-1R Catalytic 100.0 5.6E-38 1.2E-42 321.3 19.8 256 425-703 4-276 (277)
90 cd05626 STKc_LATS2 Catalytic d 100.0 7.3E-38 1.6E-42 334.7 21.6 253 428-701 2-305 (381)
91 cd05068 PTKc_Frk_like Catalyti 100.0 6.9E-38 1.5E-42 317.6 19.8 254 426-704 5-260 (261)
92 PLN00034 mitogen-activated pro 100.0 7.4E-38 1.6E-42 331.4 20.8 248 427-701 74-328 (353)
93 cd05573 STKc_ROCK_NDR_like Cat 100.0 2.1E-38 4.5E-43 336.0 16.6 252 427-701 1-285 (350)
94 cd05109 PTKc_HER2 Catalytic do 100.0 1.1E-37 2.4E-42 319.4 21.3 260 426-709 6-272 (279)
95 cd05090 PTKc_Ror1 Catalytic do 100.0 9.8E-38 2.1E-42 320.5 20.8 255 427-704 5-282 (283)
96 cd05601 STKc_CRIK Catalytic do 100.0 2.6E-38 5.6E-43 332.1 16.8 252 427-700 1-262 (330)
97 cd05599 STKc_NDR_like Catalyti 100.0 4.4E-38 9.6E-43 335.1 18.7 252 427-700 1-295 (364)
98 PTZ00283 serine/threonine prot 100.0 5.5E-38 1.2E-42 344.1 19.9 256 423-701 28-297 (496)
99 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.3E-37 2.7E-42 319.7 21.2 267 429-706 6-282 (283)
100 cd05053 PTKc_FGFR Catalytic do 100.0 7.2E-38 1.5E-42 323.3 19.3 260 424-706 9-292 (293)
101 cd05059 PTKc_Tec_like Catalyti 100.0 9.4E-38 2E-42 315.6 19.6 251 427-702 4-255 (256)
102 cd05584 STKc_p70S6K Catalytic 100.0 1.1E-37 2.5E-42 325.8 20.7 241 433-700 2-255 (323)
103 cd05628 STKc_NDR1 Catalytic do 100.0 1.2E-37 2.6E-42 331.0 20.9 201 427-632 1-238 (363)
104 cd05052 PTKc_Abl Catalytic dom 100.0 1.4E-37 3E-42 315.8 20.5 254 427-705 6-262 (263)
105 cd05589 STKc_PKN Catalytic dom 100.0 1.3E-37 2.9E-42 325.6 20.9 244 429-700 1-256 (324)
106 cd08229 STKc_Nek7 Catalytic do 100.0 2.4E-37 5.3E-42 314.8 22.2 258 427-706 2-266 (267)
107 PHA03212 serine/threonine kina 100.0 2.6E-37 5.7E-42 329.6 23.2 262 426-700 91-375 (391)
108 cd05596 STKc_ROCK Catalytic do 100.0 9.5E-38 2.1E-42 331.8 19.7 254 425-701 41-304 (370)
109 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.3E-37 2.9E-42 323.3 20.4 262 427-711 18-305 (307)
110 cd05045 PTKc_RET Catalytic dom 100.0 3.4E-37 7.4E-42 317.6 23.0 257 428-707 1-288 (290)
111 cd05594 STKc_PKB_alpha Catalyt 100.0 7.9E-38 1.7E-42 327.4 18.4 243 433-701 1-252 (325)
112 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.9E-37 4.1E-42 323.1 21.1 266 426-714 11-302 (314)
113 cd05092 PTKc_TrkA Catalytic do 100.0 1.5E-37 3.3E-42 318.4 20.0 255 426-703 4-279 (280)
114 cd05629 STKc_NDR_like_fungal C 100.0 1E-37 2.2E-42 333.6 19.2 253 427-701 1-305 (377)
115 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.8E-37 4E-42 330.6 21.2 261 424-706 34-400 (401)
116 cd05625 STKc_LATS1 Catalytic d 100.0 1.3E-37 2.9E-42 333.2 20.2 251 428-700 2-304 (382)
117 cd05614 STKc_MSK2_N N-terminal 100.0 2.4E-37 5.3E-42 325.0 21.8 251 428-700 1-266 (332)
118 cd05608 STKc_GRK1 Catalytic do 100.0 4.3E-37 9.4E-42 314.9 23.1 244 435-700 1-256 (280)
119 cd05101 PTKc_FGFR2 Catalytic d 100.0 2.4E-37 5.3E-42 321.0 21.5 262 426-710 14-301 (304)
120 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.4E-37 3E-42 318.3 19.3 256 425-703 4-276 (277)
121 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 7.8E-37 1.7E-41 311.1 24.7 258 427-706 2-266 (267)
122 KOG4278 Protein tyrosine kinas 100.0 2.7E-38 5.9E-43 322.1 13.7 255 427-706 267-524 (1157)
123 PRK13184 pknD serine/threonine 100.0 2.4E-37 5.3E-42 346.6 22.7 261 427-708 2-293 (932)
124 cd05592 STKc_nPKC_theta_delta 100.0 1.8E-37 4E-42 323.0 20.3 240 433-699 1-246 (316)
125 cd05605 STKc_GRK4_like Catalyt 100.0 3.7E-37 7.9E-42 316.3 22.2 251 428-701 1-261 (285)
126 cd05588 STKc_aPKC Catalytic do 100.0 2.4E-37 5.1E-42 324.1 21.1 247 433-700 1-261 (329)
127 cd05591 STKc_nPKC_epsilon Cata 100.0 1.8E-37 3.9E-42 324.1 20.2 241 433-700 1-253 (321)
128 cd07862 STKc_CDK6 Catalytic do 100.0 2.7E-37 5.8E-42 318.5 21.2 263 427-700 1-286 (290)
129 cd05607 STKc_GRK7 Catalytic do 100.0 5.8E-37 1.3E-41 313.4 23.4 247 435-703 1-252 (277)
130 cd05587 STKc_cPKC Catalytic do 100.0 2.5E-37 5.4E-42 323.5 21.1 241 428-695 1-246 (324)
131 cd05598 STKc_LATS Catalytic do 100.0 6.9E-38 1.5E-42 334.9 17.2 253 427-701 1-301 (376)
132 cd05055 PTKc_PDGFR Catalytic d 100.0 7.1E-37 1.5E-41 316.7 24.2 258 426-705 34-301 (302)
133 cd05091 PTKc_Ror2 Catalytic do 100.0 1.3E-37 2.9E-42 319.6 18.5 255 427-704 5-282 (283)
134 cd05043 PTK_Ryk Pseudokinase d 100.0 3.7E-37 8.1E-42 315.7 21.8 261 425-708 4-279 (280)
135 cd05590 STKc_nPKC_eta Catalyti 100.0 1.7E-37 3.8E-42 323.7 19.6 237 433-696 1-242 (320)
136 cd05618 STKc_aPKC_iota Catalyt 100.0 2.8E-37 6.1E-42 323.3 21.1 242 433-695 1-250 (329)
137 KOG0574 STE20-like serine/thre 100.0 9.1E-40 2E-44 306.2 2.0 250 427-701 33-283 (502)
138 cd05065 PTKc_EphR_B Catalytic 100.0 5.2E-37 1.1E-41 312.7 22.4 256 427-705 4-268 (269)
139 KOG0199 ACK and related non-re 100.0 3.6E-38 7.8E-43 325.9 13.6 257 428-708 111-375 (1039)
140 KOG4194 Membrane glycoprotein 100.0 1.1E-39 2.4E-44 331.1 2.3 339 1-349 114-456 (873)
141 cd05051 PTKc_DDR Catalytic dom 100.0 6.2E-37 1.3E-41 316.9 22.9 262 426-703 4-295 (296)
142 cd05075 PTKc_Axl Catalytic dom 100.0 4.7E-37 1E-41 313.7 21.6 254 429-705 1-271 (272)
143 cd05035 PTKc_Axl_like Catalyti 100.0 1E-36 2.2E-41 311.4 24.0 254 429-705 1-272 (273)
144 cd08529 STKc_FA2-like Catalyti 100.0 1.3E-36 2.8E-41 307.5 24.4 249 428-701 1-253 (256)
145 cd05063 PTKc_EphR_A2 Catalytic 100.0 4.3E-37 9.3E-42 313.1 21.0 257 426-705 4-267 (268)
146 cd05621 STKc_ROCK2 Catalytic d 100.0 2.2E-37 4.7E-42 328.5 19.6 254 425-701 41-304 (370)
147 cd06646 STKc_MAP4K5 Catalytic 100.0 3.1E-37 6.6E-42 314.1 19.7 255 426-702 8-266 (267)
148 cd05061 PTKc_InsR Catalytic do 100.0 3.9E-37 8.5E-42 316.8 20.6 259 425-706 4-279 (288)
149 cd05097 PTKc_DDR_like Catalyti 100.0 6.1E-37 1.3E-41 316.5 22.1 263 426-704 4-295 (295)
150 cd05071 PTKc_Src Catalytic dom 100.0 5.4E-37 1.2E-41 311.1 21.2 254 426-705 5-260 (262)
151 cd05089 PTKc_Tie1 Catalytic do 100.0 1.2E-36 2.6E-41 314.6 24.1 261 427-713 2-283 (297)
152 cd05616 STKc_cPKC_beta Catalyt 100.0 3.8E-37 8.2E-42 322.0 20.6 241 428-695 1-246 (323)
153 cd05570 STKc_PKC Catalytic dom 100.0 3.4E-37 7.4E-42 321.4 20.2 241 433-700 1-251 (318)
154 cd05619 STKc_nPKC_theta Cataly 100.0 4.9E-37 1.1E-41 319.6 21.2 240 433-699 1-246 (316)
155 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.3E-36 2.8E-41 312.3 23.7 269 428-705 5-283 (284)
156 cd05066 PTKc_EphR_A Catalytic 100.0 5.8E-37 1.3E-41 311.9 21.0 256 427-705 4-266 (267)
157 cd05115 PTKc_Zap-70 Catalytic 100.0 7.6E-37 1.7E-41 308.9 21.5 248 434-705 2-255 (257)
158 cd05620 STKc_nPKC_delta Cataly 100.0 5E-37 1.1E-41 319.7 20.6 240 433-699 1-246 (316)
159 cd05582 STKc_RSK_N N-terminal 100.0 1.2E-37 2.6E-42 325.2 15.8 238 433-697 2-245 (318)
160 cd07872 STKc_PCTAIRE2 Catalyti 100.0 6.5E-37 1.4E-41 318.5 21.3 265 427-700 6-285 (309)
161 cd06654 STKc_PAK1 Catalytic do 100.0 8.2E-37 1.8E-41 315.4 21.7 250 427-701 20-270 (296)
162 cd05057 PTKc_EGFR_like Catalyt 100.0 7.8E-37 1.7E-41 313.1 21.4 259 426-708 6-271 (279)
163 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.1E-36 2.4E-41 308.6 22.2 253 426-704 5-259 (260)
164 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.2E-36 2.6E-41 320.7 23.3 260 426-707 6-341 (343)
165 cd05085 PTKc_Fer Catalytic dom 100.0 8.3E-37 1.8E-41 307.7 21.1 247 433-703 1-249 (250)
166 KOG0032 Ca2+/calmodulin-depend 100.0 1.4E-36 3E-41 315.6 23.3 251 426-701 34-293 (382)
167 cd05032 PTKc_InsR_like Catalyt 100.0 9.4E-37 2E-41 312.3 21.8 255 426-703 5-276 (277)
168 cd05040 PTKc_Ack_like Catalyti 100.0 6.2E-37 1.4E-41 309.9 20.1 248 433-703 1-256 (257)
169 cd05041 PTKc_Fes_like Catalyti 100.0 1E-36 2.2E-41 307.2 21.4 248 433-703 1-250 (251)
170 cd06611 STKc_SLK_like Catalyti 100.0 5.3E-37 1.2E-41 314.6 19.7 253 426-701 4-262 (280)
171 cd05622 STKc_ROCK1 Catalytic d 100.0 4.7E-37 1E-41 326.4 19.9 258 421-701 37-304 (371)
172 KOG1025 Epidermal growth facto 100.0 6.5E-38 1.4E-42 329.4 13.0 256 428-707 697-959 (1177)
173 cd06643 STKc_SLK Catalytic dom 100.0 9.8E-37 2.1E-41 312.9 21.5 250 428-700 6-261 (282)
174 cd05116 PTKc_Syk Catalytic dom 100.0 9.6E-37 2.1E-41 308.5 21.1 247 434-705 2-255 (257)
175 cd05095 PTKc_DDR2 Catalytic do 100.0 1.1E-36 2.4E-41 314.8 22.0 262 427-704 5-296 (296)
176 cd05575 STKc_SGK Catalytic dom 100.0 3.9E-37 8.5E-42 321.8 18.8 237 433-696 1-242 (323)
177 KOG4279 Serine/threonine prote 100.0 6E-38 1.3E-42 323.5 12.2 244 434-700 582-831 (1226)
178 cd06644 STKc_STK10_LOK Catalyt 100.0 1.5E-36 3.2E-41 313.2 22.6 251 427-700 12-268 (292)
179 cd06624 STKc_ASK Catalytic dom 100.0 2.1E-36 4.5E-41 308.1 23.3 255 423-700 4-264 (268)
180 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.3E-36 2.8E-41 308.1 21.6 239 433-702 1-261 (262)
181 cd06612 STKc_MST1_2 Catalytic 100.0 1.3E-36 2.8E-41 307.4 21.6 249 427-700 3-252 (256)
182 cd05056 PTKc_FAK Catalytic dom 100.0 1.6E-36 3.4E-41 309.3 22.4 258 426-708 5-268 (270)
183 cd00192 PTKc Catalytic domain 100.0 2E-36 4.3E-41 307.1 22.6 248 433-703 1-262 (262)
184 cd05067 PTKc_Lck_Blk Catalytic 100.0 2.1E-36 4.6E-41 306.5 22.7 253 426-704 5-259 (260)
185 cd05039 PTKc_Csk_like Catalyti 100.0 2.6E-36 5.6E-41 305.2 23.2 250 426-705 5-256 (256)
186 cd05088 PTKc_Tie2 Catalytic do 100.0 8.2E-37 1.8E-41 316.5 19.9 257 426-708 6-283 (303)
187 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.3E-36 2.8E-41 318.1 21.6 243 433-696 1-249 (327)
188 cd06625 STKc_MEKK3_like Cataly 100.0 3.9E-36 8.4E-41 305.3 24.3 252 427-701 2-260 (263)
189 cd06615 PKc_MEK Catalytic doma 100.0 2.3E-36 5E-41 313.9 23.1 264 427-701 1-287 (308)
190 cd05050 PTKc_Musk Catalytic do 100.0 8.9E-37 1.9E-41 314.3 19.8 256 426-704 4-288 (288)
191 cd05110 PTKc_HER4 Catalytic do 100.0 1E-36 2.2E-41 315.9 20.2 259 426-708 6-271 (303)
192 cd05602 STKc_SGK1 Catalytic do 100.0 6.8E-37 1.5E-41 320.3 19.0 241 433-700 1-246 (325)
193 cd06645 STKc_MAP4K3 Catalytic 100.0 1.4E-36 3.1E-41 309.2 20.6 253 426-700 8-264 (267)
194 cd07853 STKc_NLK Catalytic dom 100.0 1.3E-36 2.8E-41 324.3 21.2 266 428-701 1-288 (372)
195 cd05082 PTKc_Csk Catalytic dom 100.0 2.4E-36 5.3E-41 305.3 22.1 248 427-705 6-256 (256)
196 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.7E-36 3.7E-41 311.6 21.1 271 427-705 4-283 (284)
197 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.9E-36 6.3E-41 307.1 22.6 252 433-703 1-268 (269)
198 cd05069 PTKc_Yes Catalytic dom 100.0 3.2E-36 6.9E-41 305.2 22.6 252 427-704 6-259 (260)
199 cd06613 STKc_MAP4K3_like Catal 100.0 3.2E-36 6.8E-41 305.7 22.6 253 427-700 3-259 (262)
200 cd05597 STKc_DMPK_like Catalyt 100.0 2.6E-36 5.5E-41 316.5 22.6 255 427-701 1-266 (331)
201 cd05627 STKc_NDR2 Catalytic do 100.0 5.5E-37 1.2E-41 325.7 17.7 252 427-700 1-292 (360)
202 cd05615 STKc_cPKC_alpha Cataly 100.0 1.5E-36 3.2E-41 317.2 20.7 241 428-695 1-246 (323)
203 cd05060 PTKc_Syk_like Catalyti 100.0 4.7E-36 1E-40 303.4 23.7 248 433-705 1-255 (257)
204 cd07876 STKc_JNK2 Catalytic do 100.0 2.4E-36 5.3E-41 320.8 22.5 264 425-701 19-315 (359)
205 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.7E-36 3.6E-41 314.2 20.6 265 427-700 6-285 (301)
206 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 3E-36 6.6E-41 307.5 22.1 239 434-703 2-274 (274)
207 PHA03211 serine/threonine kina 100.0 1.9E-36 4.1E-41 326.4 21.5 264 427-701 169-455 (461)
208 cd05034 PTKc_Src_like Catalyti 100.0 1.7E-36 3.7E-41 307.5 20.0 255 425-704 4-260 (261)
209 cd05604 STKc_SGK3 Catalytic do 100.0 7E-37 1.5E-41 320.2 17.7 241 433-700 1-246 (325)
210 PTZ00036 glycogen synthase kin 100.0 1.1E-36 2.5E-41 329.9 19.8 262 426-700 65-350 (440)
211 cd06655 STKc_PAK2 Catalytic do 100.0 1.7E-36 3.7E-41 312.9 20.2 249 427-700 19-268 (296)
212 cd06656 STKc_PAK3 Catalytic do 100.0 1.8E-36 3.9E-41 313.0 20.3 250 426-700 18-268 (297)
213 PHA03207 serine/threonine kina 100.0 1.6E-36 3.4E-41 325.3 20.3 265 426-701 91-375 (392)
214 cd06619 PKc_MKK5 Catalytic dom 100.0 2.5E-36 5.3E-41 309.3 20.8 249 427-701 1-253 (279)
215 cd06631 STKc_YSK4 Catalytic do 100.0 6.6E-36 1.4E-40 303.9 23.8 251 428-700 1-261 (265)
216 cd05624 STKc_MRCK_beta Catalyt 100.0 2.3E-36 4.9E-41 316.9 20.8 255 427-701 1-266 (331)
217 cd05100 PTKc_FGFR3 Catalytic d 100.0 2.5E-36 5.4E-41 317.5 21.2 258 427-707 12-295 (334)
218 cd05623 STKc_MRCK_alpha Cataly 100.0 2.9E-36 6.4E-41 316.4 21.6 255 427-701 1-266 (332)
219 cd08219 STKc_Nek3 Catalytic do 100.0 2.4E-36 5.1E-41 305.3 19.9 249 428-701 1-252 (255)
220 cd05112 PTKc_Itk Catalytic dom 100.0 5.3E-36 1.2E-40 302.9 22.3 251 427-702 4-255 (256)
221 cd05058 PTKc_Met_Ron Catalytic 100.0 3.6E-36 7.8E-41 305.3 21.1 252 433-707 1-261 (262)
222 cd05632 STKc_GRK5 Catalytic do 100.0 5.3E-36 1.1E-40 307.7 22.5 249 429-700 2-260 (285)
223 cd05630 STKc_GRK6 Catalytic do 100.0 4.4E-36 9.6E-41 308.1 21.9 249 429-700 2-260 (285)
224 PF00069 Pkinase: Protein kina 100.0 1.5E-36 3.2E-41 307.7 17.9 252 429-700 1-256 (260)
225 cd05603 STKc_SGK2 Catalytic do 100.0 1.7E-36 3.7E-41 316.9 18.8 237 433-696 1-242 (321)
226 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2.4E-36 5.2E-41 310.3 19.6 255 427-702 5-267 (284)
227 cd05073 PTKc_Hck Catalytic dom 100.0 8E-36 1.7E-40 302.3 22.8 253 426-704 5-259 (260)
228 cd07861 STKc_CDK1_euk Catalyti 100.0 4.3E-36 9.4E-41 308.7 21.0 265 428-700 1-281 (285)
229 cd06637 STKc_TNIK Catalytic do 100.0 1.8E-36 4E-41 309.3 17.9 252 424-700 3-268 (272)
230 cd05044 PTKc_c-ros Catalytic d 100.0 3.4E-36 7.3E-41 306.8 19.6 248 433-703 1-268 (269)
231 cd07863 STKc_CDK4 Catalytic do 100.0 3.4E-36 7.5E-41 310.0 19.8 262 428-700 1-284 (288)
232 cd06609 STKc_MST3_like Catalyt 100.0 4.6E-36 1E-40 306.6 20.4 248 427-700 1-250 (274)
233 cd05047 PTKc_Tie Catalytic dom 100.0 1.4E-35 3E-40 302.2 23.8 248 433-706 1-269 (270)
234 cd08227 PK_STRAD_alpha Pseudok 100.0 6.2E-36 1.3E-40 313.5 21.6 265 431-700 2-306 (327)
235 cd07878 STKc_p38beta_MAPK11 Ca 100.0 7.1E-36 1.5E-40 315.4 22.2 266 423-701 11-298 (343)
236 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.3E-36 5E-41 305.8 17.5 240 433-703 1-258 (258)
237 KOG4194 Membrane glycoprotein 100.0 2.3E-38 5.1E-43 321.4 2.9 326 8-343 98-427 (873)
238 PHA03209 serine/threonine kina 100.0 5.7E-36 1.2E-40 317.0 21.2 262 425-700 64-350 (357)
239 cd07870 STKc_PFTAIRE2 Catalyti 100.0 7.2E-36 1.6E-40 308.0 21.4 269 425-700 3-287 (291)
240 cd08221 STKc_Nek9 Catalytic do 100.0 9E-36 2E-40 301.2 21.6 249 428-701 1-253 (256)
241 cd05042 PTKc_Aatyk Catalytic d 100.0 7.7E-36 1.7E-40 304.1 21.3 252 433-703 1-268 (269)
242 KOG0577 Serine/threonine prote 100.0 5E-37 1.1E-41 311.7 12.3 246 427-701 26-278 (948)
243 PTZ00284 protein kinase; Provi 100.0 8.6E-36 1.9E-40 327.0 23.0 266 422-700 124-437 (467)
244 cd07874 STKc_JNK3 Catalytic do 100.0 5.6E-36 1.2E-40 317.6 20.8 265 425-701 15-311 (355)
245 cd06605 PKc_MAPKK Catalytic do 100.0 7.1E-36 1.5E-40 303.7 20.5 253 427-700 1-256 (265)
246 cd07839 STKc_CDK5 Catalytic do 100.0 3.5E-36 7.5E-41 309.3 17.9 266 428-700 1-280 (284)
247 PTZ00266 NIMA-related protein 100.0 2.7E-36 5.8E-41 339.4 18.3 255 424-700 10-294 (1021)
248 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.3E-35 2.8E-40 305.3 22.1 252 427-701 1-262 (286)
249 cd07868 STKc_CDK8 Catalytic do 100.0 1.6E-35 3.5E-40 309.3 22.9 195 432-633 6-219 (317)
250 cd06640 STKc_MST4 Catalytic do 100.0 1.6E-35 3.4E-40 303.1 22.3 248 427-701 4-253 (277)
251 cd05609 STKc_MAST Catalytic do 100.0 1.2E-35 2.6E-40 308.3 21.5 256 427-704 1-273 (305)
252 KOG0579 Ste20-like serine/thre 100.0 2.4E-37 5.1E-42 315.9 8.5 251 427-700 32-288 (1187)
253 cd05046 PTK_CCK4 Pseudokinase 100.0 8E-36 1.7E-40 305.0 19.9 254 427-703 5-274 (275)
254 cd06642 STKc_STK25-YSK1 Cataly 100.0 7.1E-36 1.5E-40 305.7 19.5 247 427-700 4-252 (277)
255 cd07875 STKc_JNK1 Catalytic do 100.0 6.9E-36 1.5E-40 317.9 20.1 265 425-701 22-318 (364)
256 cd08218 STKc_Nek1 Catalytic do 100.0 1.5E-35 3.2E-40 299.7 21.5 248 428-700 1-252 (256)
257 cd06638 STKc_myosinIIIA Cataly 100.0 1.1E-35 2.5E-40 305.8 20.8 258 420-701 11-283 (286)
258 cd08223 STKc_Nek4 Catalytic do 100.0 2.5E-35 5.5E-40 298.1 22.9 248 428-700 1-253 (257)
259 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.5E-35 3.2E-40 301.7 21.3 256 427-700 1-263 (267)
260 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.4E-35 3.1E-40 300.4 21.0 238 433-703 1-259 (259)
261 cd06628 STKc_MAPKKK_Byr2_like 100.0 1E-35 2.2E-40 302.8 20.1 249 428-700 1-263 (267)
262 cd06647 STKc_PAK_I Catalytic d 100.0 1.3E-35 2.9E-40 305.9 20.9 250 427-701 19-269 (293)
263 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.5E-35 3.2E-40 302.5 21.1 254 428-700 2-268 (272)
264 cd07832 STKc_CCRK Catalytic do 100.0 2.3E-35 4.9E-40 303.6 22.5 266 428-701 1-282 (286)
265 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.8E-35 3.8E-40 304.4 21.3 265 427-700 1-282 (286)
266 cd06658 STKc_PAK5 Catalytic do 100.0 6.7E-36 1.4E-40 307.8 18.1 249 428-701 23-272 (292)
267 cd05586 STKc_Sck1_like Catalyt 100.0 8.2E-36 1.8E-40 313.0 19.0 240 435-700 1-252 (330)
268 KOG0667 Dual-specificity tyros 100.0 1.1E-35 2.5E-40 310.3 19.7 195 427-632 186-390 (586)
269 smart00219 TyrKc Tyrosine kina 100.0 3.9E-35 8.4E-40 296.9 22.9 250 429-702 1-258 (258)
270 KOG4717 Serine/threonine prote 100.0 7E-36 1.5E-40 298.8 16.9 249 425-700 16-269 (864)
271 cd06651 STKc_MEKK3 Catalytic d 100.0 3.3E-35 7.1E-40 298.8 22.3 250 427-700 2-260 (266)
272 KOG0596 Dual specificity; seri 100.0 4.8E-36 1E-40 303.7 15.5 257 423-701 357-627 (677)
273 cd06617 PKc_MKK3_6 Catalytic d 100.0 3E-35 6.5E-40 302.2 21.8 249 427-700 1-260 (283)
274 cd08528 STKc_Nek10 Catalytic d 100.0 3E-35 6.4E-40 299.8 21.5 252 428-703 1-268 (269)
275 KOG0983 Mitogen-activated prot 100.0 1.8E-36 3.8E-41 281.0 11.2 252 427-701 92-349 (391)
276 cd07844 STKc_PCTAIRE_like Cata 100.0 2.5E-35 5.5E-40 304.0 21.1 267 427-700 5-287 (291)
277 cd05083 PTKc_Chk Catalytic dom 100.0 1.7E-35 3.7E-40 298.8 19.2 246 427-704 6-253 (254)
278 cd05074 PTKc_Tyro3 Catalytic d 100.0 2.1E-35 4.6E-40 301.6 20.1 254 429-705 1-272 (273)
279 cd05086 PTKc_Aatyk2 Catalytic 100.0 6.2E-35 1.3E-39 297.1 23.2 252 433-703 1-267 (268)
280 cd06632 STKc_MEKK1_plant Catal 100.0 4.9E-35 1.1E-39 296.2 22.2 247 428-700 1-254 (258)
281 cd07841 STKc_CDK7 Catalytic do 100.0 2.6E-35 5.7E-40 304.9 20.7 266 428-701 1-282 (298)
282 cd06659 STKc_PAK6 Catalytic do 100.0 1.2E-35 2.6E-40 306.7 17.9 248 429-701 23-271 (297)
283 cd06608 STKc_myosinIII_like Ca 100.0 1.8E-35 3.9E-40 302.4 18.9 253 424-700 3-271 (275)
284 cd06639 STKc_myosinIIIB Cataly 100.0 2.8E-35 6E-40 303.6 20.4 257 420-700 15-286 (291)
285 cd06636 STKc_MAP4K4_6 Catalyti 100.0 3E-35 6.6E-40 301.9 20.4 257 419-700 8-278 (282)
286 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 8.6E-35 1.9E-39 299.2 23.8 255 427-700 1-265 (287)
287 cd06607 STKc_TAO Catalytic dom 100.0 6.3E-35 1.4E-39 303.2 22.9 246 427-701 15-267 (307)
288 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.6E-35 3.4E-40 304.7 18.0 266 427-700 1-282 (286)
289 cd06626 STKc_MEKK4 Catalytic d 100.0 5.8E-35 1.3E-39 296.8 21.8 252 428-700 1-260 (264)
290 cd08220 STKc_Nek8 Catalytic do 100.0 1E-34 2.2E-39 293.5 23.4 247 428-700 1-252 (256)
291 cd07867 STKc_CDC2L6 Catalytic 100.0 6.7E-35 1.4E-39 304.8 22.7 193 433-632 7-218 (317)
292 cd06648 STKc_PAK_II Catalytic 100.0 4.9E-35 1.1E-39 300.5 21.2 248 428-700 20-268 (285)
293 cd07860 STKc_CDK2_3 Catalytic 100.0 3.7E-35 8E-40 301.6 20.1 265 428-700 1-280 (284)
294 cd06614 STKc_PAK Catalytic dom 100.0 6.5E-35 1.4E-39 300.0 21.7 252 425-700 17-269 (286)
295 cd05580 STKc_PKA Catalytic dom 100.0 5.7E-35 1.2E-39 301.0 21.2 244 427-700 1-253 (290)
296 cd06623 PKc_MAPKK_plant_like C 100.0 1E-34 2.3E-39 294.9 22.8 251 427-701 1-256 (264)
297 cd06630 STKc_MEKK1 Catalytic d 100.0 1E-34 2.3E-39 295.6 22.8 253 428-700 1-263 (268)
298 cd05122 PKc_STE Catalytic doma 100.0 8.3E-35 1.8E-39 293.3 21.7 249 428-700 1-250 (253)
299 cd06652 STKc_MEKK2 Catalytic d 100.0 8.4E-35 1.8E-39 295.7 21.8 250 427-700 2-260 (265)
300 cd08217 STKc_Nek2 Catalytic do 100.0 1.3E-34 2.8E-39 294.3 22.9 253 428-701 1-262 (265)
301 cd07833 STKc_CDKL Catalytic do 100.0 6.4E-35 1.4E-39 300.6 20.6 266 427-700 1-284 (288)
302 cd06641 STKc_MST3 Catalytic do 100.0 2.1E-34 4.7E-39 294.7 24.4 248 427-701 4-253 (277)
303 KOG0986 G protein-coupled rece 100.0 4.2E-36 9.2E-41 296.9 11.0 246 427-695 185-435 (591)
304 KOG0607 MAP kinase-interacting 100.0 1E-35 2.3E-40 281.5 12.9 270 418-700 74-360 (463)
305 cd07843 STKc_CDC2L1 Catalytic 100.0 8.1E-35 1.7E-39 300.5 20.5 265 427-700 5-289 (293)
306 cd07831 STKc_MOK Catalytic dom 100.0 1.4E-34 3.1E-39 297.0 22.2 261 429-700 1-278 (282)
307 cd06917 STKc_NAK1_like Catalyt 100.0 9.7E-35 2.1E-39 297.4 20.7 247 428-700 2-254 (277)
308 cd05578 STKc_Yank1 Catalytic d 100.0 6.6E-35 1.4E-39 295.3 19.2 247 428-699 1-253 (258)
309 cd05574 STKc_phototropin_like 100.0 6.9E-35 1.5E-39 304.4 19.9 252 427-700 1-288 (316)
310 KOG0584 Serine/threonine prote 100.0 1.4E-35 3.1E-40 306.3 13.4 241 433-700 46-295 (632)
311 cd06635 STKc_TAO1 Catalytic do 100.0 2.9E-34 6.4E-39 299.4 22.8 247 428-703 26-279 (317)
312 KOG4250 TANK binding protein k 100.0 2.9E-35 6.2E-40 307.7 15.0 273 428-707 14-312 (732)
313 KOG0666 Cyclin C-dependent kin 100.0 5.9E-36 1.3E-40 282.3 8.8 202 426-632 23-242 (438)
314 cd07835 STKc_CDK1_like Catalyt 100.0 1.4E-34 3.1E-39 297.1 20.0 264 429-700 1-279 (283)
315 cd07849 STKc_ERK1_2_like Catal 100.0 1.1E-34 2.4E-39 305.3 19.5 267 426-701 4-292 (336)
316 cd06616 PKc_MKK4 Catalytic dom 100.0 1.1E-34 2.4E-39 298.7 18.8 254 427-701 4-267 (288)
317 cd05633 STKc_GRK3 Catalytic do 100.0 4.4E-34 9.5E-39 292.4 23.0 242 434-701 1-255 (279)
318 KOG1035 eIF-2alpha kinase GCN2 100.0 2.8E-35 6E-40 323.2 14.8 255 424-700 476-870 (1351)
319 cd07845 STKc_CDK10 Catalytic d 100.0 1.7E-34 3.8E-39 300.3 20.0 266 426-700 6-289 (309)
320 cd07836 STKc_Pho85 Catalytic d 100.0 2.9E-34 6.3E-39 295.0 21.3 265 428-700 1-280 (284)
321 KOG0690 Serine/threonine prote 100.0 1.6E-35 3.4E-40 280.7 10.8 251 425-702 166-422 (516)
322 KOG1024 Receptor-like protein 100.0 4.1E-35 8.9E-40 284.6 13.9 265 422-709 279-559 (563)
323 KOG0200 Fibroblast/platelet-de 100.0 1.3E-34 2.9E-39 322.9 19.9 259 427-707 296-581 (609)
324 cd07865 STKc_CDK9 Catalytic do 100.0 2.2E-34 4.7E-39 300.0 20.2 268 426-700 11-306 (310)
325 cd06606 STKc_MAPKKK Catalytic 100.0 5.4E-34 1.2E-38 288.6 22.6 251 428-700 1-256 (260)
326 cd08225 STKc_Nek5 Catalytic do 100.0 2.7E-34 5.9E-39 290.6 20.2 248 428-700 1-253 (257)
327 PHA03390 pk1 serine/threonine- 100.0 8E-34 1.7E-38 288.4 23.7 245 424-700 11-261 (267)
328 KOG0612 Rho-associated, coiled 100.0 1.4E-35 3E-40 323.0 11.2 257 421-700 69-337 (1317)
329 cd05572 STKc_cGK_PKG Catalytic 100.0 5.7E-34 1.2E-38 289.1 22.3 242 435-700 1-251 (262)
330 cd07842 STKc_CDK8_like Catalyt 100.0 3.7E-34 8E-39 299.1 21.4 268 428-700 1-312 (316)
331 cd07850 STKc_JNK Catalytic dom 100.0 4.9E-34 1.1E-38 302.3 22.5 265 425-701 14-311 (353)
332 cd06657 STKc_PAK4 Catalytic do 100.0 2.3E-34 4.9E-39 296.3 19.2 244 432-700 25-269 (292)
333 cd08215 STKc_Nek Catalytic dom 100.0 3.8E-34 8.2E-39 289.6 20.5 248 428-700 1-254 (258)
334 cd05118 STKc_CMGC Catalytic do 100.0 5.1E-34 1.1E-38 293.0 21.6 263 429-700 1-279 (283)
335 cd07837 STKc_CdkB_plant Cataly 100.0 3.5E-34 7.5E-39 296.2 20.4 266 427-700 1-290 (295)
336 cd05577 STKc_GRK Catalytic dom 100.0 6.7E-34 1.4E-38 291.0 22.2 243 435-700 1-253 (277)
337 cd07864 STKc_CDK12 Catalytic d 100.0 4.2E-34 9.2E-39 296.6 21.0 270 424-700 4-298 (302)
338 KOG4645 MAPKKK (MAP kinase kin 100.0 3.8E-36 8.2E-41 331.5 5.8 257 422-701 1230-1494(1509)
339 cd07855 STKc_ERK5 Catalytic do 100.0 2.6E-34 5.7E-39 302.1 19.3 269 426-701 4-294 (334)
340 cd05579 STKc_MAST_like Catalyt 100.0 2E-34 4.4E-39 292.8 17.8 246 435-703 1-256 (265)
341 cd06618 PKc_MKK7 Catalytic dom 100.0 3.4E-34 7.3E-39 296.2 19.6 253 426-701 14-273 (296)
342 KOG0586 Serine/threonine prote 100.0 1.2E-34 2.7E-39 299.1 16.0 248 425-700 54-305 (596)
343 cd05611 STKc_Rim15_like Cataly 100.0 6.2E-34 1.3E-38 288.5 20.8 244 433-703 2-250 (260)
344 cd07840 STKc_CDK9_like Catalyt 100.0 4.5E-34 9.8E-39 294.0 20.1 264 429-700 1-283 (287)
345 PHA03210 serine/threonine kina 100.0 3.4E-34 7.4E-39 315.3 20.3 270 425-700 146-453 (501)
346 cd08530 STKc_CNK2-like Catalyt 100.0 5.4E-34 1.2E-38 288.2 20.2 246 428-700 1-252 (256)
347 cd08226 PK_STRAD_beta Pseudoki 100.0 8.4E-34 1.8E-38 297.5 22.1 276 433-713 4-322 (328)
348 PLN00009 cyclin-dependent kina 100.0 6.8E-34 1.5E-38 293.7 20.7 265 427-700 2-283 (294)
349 cd07852 STKc_MAPK15 Catalytic 100.0 6.9E-34 1.5E-38 299.4 21.0 268 425-701 5-295 (337)
350 KOG0604 MAP kinase-activated p 100.0 6.7E-35 1.4E-39 274.0 11.7 250 425-700 59-321 (400)
351 cd08216 PK_STRAD Pseudokinase 100.0 9.4E-34 2E-38 295.6 21.8 264 431-701 6-295 (314)
352 cd06627 STKc_Cdc7_like Catalyt 100.0 1.9E-33 4.1E-38 283.8 23.3 247 428-700 1-250 (254)
353 cd06634 STKc_TAO2 Catalytic do 100.0 1.3E-33 2.8E-38 293.3 22.2 248 427-703 15-269 (308)
354 PHA02882 putative serine/threo 100.0 7.4E-34 1.6E-38 292.9 19.4 259 426-702 11-293 (294)
355 cd05606 STKc_beta_ARK Catalyti 100.0 4.1E-33 8.9E-38 285.1 24.1 241 434-700 1-254 (278)
356 cd06633 STKc_TAO3 Catalytic do 100.0 2.3E-33 5E-38 292.0 22.4 244 429-701 23-273 (313)
357 cd07858 STKc_TEY_MAPK_plant Ca 100.0 9.8E-34 2.1E-38 298.1 19.6 271 426-705 4-297 (337)
358 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.5E-33 3.3E-38 295.0 20.8 267 422-701 5-288 (328)
359 cd07838 STKc_CDK4_6_like Catal 100.0 3.2E-33 6.9E-38 287.8 22.8 261 429-700 1-283 (287)
360 cd06653 STKc_MEKK3_like_1 Cata 100.0 4.6E-33 1E-37 282.7 23.5 250 427-700 2-260 (264)
361 cd05583 STKc_MSK_N N-terminal 100.0 2.1E-33 4.6E-38 289.1 20.5 255 428-704 1-266 (288)
362 cd07877 STKc_p38alpha_MAPK14 C 100.0 3.8E-33 8.2E-38 294.3 22.7 270 419-701 9-300 (345)
363 cd05581 STKc_PDK1 Catalytic do 100.0 2.3E-33 5E-38 287.7 19.8 249 427-700 1-276 (280)
364 cd07834 STKc_MAPK Catalytic do 100.0 2.2E-33 4.8E-38 294.9 19.7 271 428-706 1-296 (330)
365 cd07830 STKc_MAK_like Catalyti 100.0 4E-33 8.6E-38 286.4 21.0 262 429-700 1-279 (283)
366 KOG0669 Cyclin T-dependent kin 100.0 1.5E-35 3.2E-40 271.6 2.4 270 427-701 17-315 (376)
367 PTZ00024 cyclin-dependent prot 100.0 3.2E-33 6.9E-38 294.2 20.5 265 427-700 8-312 (335)
368 cd05613 STKc_MSK1_N N-terminal 100.0 7.5E-33 1.6E-37 285.3 22.5 251 428-700 1-267 (290)
369 cd07866 STKc_BUR1 Catalytic do 100.0 1.7E-33 3.6E-38 293.4 17.9 267 426-700 7-307 (311)
370 cd07880 STKc_p38gamma_MAPK12 C 100.0 4.8E-33 1E-37 293.3 21.5 264 424-700 12-297 (343)
371 cd07879 STKc_p38delta_MAPK13 C 100.0 4.3E-33 9.2E-38 293.7 20.5 268 426-707 14-305 (342)
372 KOG0662 Cyclin-dependent kinas 100.0 1.8E-33 3.9E-38 244.9 14.3 266 427-700 2-282 (292)
373 cd07854 STKc_MAPK4_6 Catalytic 100.0 2.4E-33 5.3E-38 295.5 18.5 265 427-700 5-299 (342)
374 cd07829 STKc_CDK_like Catalyti 100.0 4E-33 8.7E-38 286.2 19.3 263 429-700 1-278 (282)
375 cd07851 STKc_p38 Catalytic dom 100.0 2.4E-33 5.3E-38 295.7 18.1 262 425-700 13-297 (343)
376 KOG0696 Serine/threonine prote 100.0 7.5E-34 1.6E-38 277.2 10.9 245 423-694 345-594 (683)
377 KOG4236 Serine/threonine prote 100.0 3.9E-34 8.5E-39 287.0 9.2 241 433-699 570-817 (888)
378 KOG1151 Tousled-like protein k 100.0 4.4E-34 9.6E-39 281.1 9.0 257 426-699 462-739 (775)
379 cd05610 STKc_MASTL Catalytic d 100.0 1.2E-32 2.5E-37 312.4 21.2 145 427-576 4-152 (669)
380 cd07857 STKc_MPK1 Catalytic do 100.0 1.5E-32 3.3E-37 288.5 20.3 266 428-700 1-291 (332)
381 cd08222 STKc_Nek11 Catalytic d 100.0 9E-33 2E-37 280.0 17.3 247 428-700 1-256 (260)
382 cd05123 STKc_AGC Catalytic dom 100.0 3.7E-32 8E-37 273.7 21.3 236 435-697 1-240 (250)
383 KOG0671 LAMMER dual specificit 100.0 5E-33 1.1E-37 270.8 13.7 263 426-700 88-405 (415)
384 KOG1006 Mitogen-activated prot 100.0 1.2E-34 2.7E-39 267.8 2.1 252 429-700 66-326 (361)
385 KOG0444 Cytoskeletal regulator 100.0 2.2E-35 4.7E-40 301.6 -4.3 333 3-350 46-380 (1255)
386 KOG0603 Ribosomal protein S6 k 100.0 1.3E-32 2.8E-37 285.8 15.1 239 426-700 321-562 (612)
387 cd05576 STKc_RPK118_like Catal 100.0 4.1E-32 9E-37 270.7 17.5 221 438-697 4-225 (237)
388 KOG0614 cGMP-dependent protein 100.0 1.6E-33 3.4E-38 281.9 6.3 242 427-694 420-665 (732)
389 KOG0608 Warts/lats-like serine 100.0 2.4E-32 5.3E-37 279.7 15.0 220 415-639 614-880 (1034)
390 KOG0695 Serine/threonine prote 100.0 1.5E-32 3.2E-37 261.4 12.0 248 426-694 249-503 (593)
391 KOG0587 Traf2- and Nck-interac 100.0 2.3E-31 5E-36 283.8 17.0 254 423-700 15-281 (953)
392 smart00220 S_TKc Serine/Threon 100.0 8.8E-31 1.9E-35 262.2 17.9 238 439-700 1-240 (244)
393 KOG0984 Mitogen-activated prot 100.0 2.6E-31 5.6E-36 237.0 11.6 203 426-635 45-257 (282)
394 KOG0668 Casein kinase II, alph 100.0 3.1E-31 6.7E-36 240.0 11.5 261 426-700 37-321 (338)
395 PLN03225 Serine/threonine-prot 100.0 1E-30 2.2E-35 288.8 17.8 259 425-701 130-450 (566)
396 PLN03224 probable serine/threo 100.0 2.3E-30 5E-35 278.2 18.6 257 425-700 143-499 (507)
397 KOG0444 Cytoskeletal regulator 100.0 4E-33 8.8E-38 285.0 -2.5 311 2-328 68-381 (1255)
398 KOG1027 Serine/threonine prote 100.0 2.8E-31 6.1E-36 281.8 8.6 242 431-700 513-766 (903)
399 KOG1290 Serine/threonine prote 100.0 8.7E-29 1.9E-33 247.6 19.9 130 427-561 78-221 (590)
400 KOG0664 Nemo-like MAPK-related 100.0 8.5E-31 1.8E-35 243.0 4.0 265 429-703 55-345 (449)
401 KOG1152 Signal transduction se 100.0 5.9E-30 1.3E-34 260.4 8.7 196 427-631 561-770 (772)
402 KOG0472 Leucine-rich repeat pr 100.0 1.6E-31 3.4E-36 260.8 -4.3 299 4-322 175-541 (565)
403 cd00180 PKc Catalytic domain o 100.0 1.4E-27 3E-32 233.4 21.2 210 435-701 1-214 (215)
404 KOG0472 Leucine-rich repeat pr 100.0 5.7E-32 1.2E-36 263.8 -10.1 323 2-344 150-540 (565)
405 KOG0665 Jun-N-terminal kinase 100.0 9.4E-29 2E-33 235.4 9.4 259 426-700 16-309 (369)
406 KOG1345 Serine/threonine kinas 100.0 2.2E-28 4.7E-33 227.1 10.0 252 426-701 23-284 (378)
407 KOG0576 Mitogen-activated prot 99.9 3E-29 6.6E-34 259.5 2.3 253 426-700 14-270 (829)
408 smart00221 STYKc Protein kinas 99.9 7.7E-27 1.7E-31 230.7 18.7 199 429-632 1-202 (225)
409 KOG0670 U4/U6-associated splic 99.9 6.2E-28 1.3E-32 242.6 10.6 266 425-700 430-745 (752)
410 KOG1167 Serine/threonine prote 99.9 4E-27 8.8E-32 233.1 12.8 269 422-700 31-380 (418)
411 smart00750 KIND kinase non-cat 99.9 3E-25 6.5E-30 210.4 15.7 169 508-707 1-171 (176)
412 KOG0618 Serine/threonine phosp 99.9 1.7E-27 3.7E-32 255.5 -3.4 334 2-345 81-489 (1081)
413 PLN00181 protein SPA1-RELATED; 99.9 9.6E-26 2.1E-30 262.7 9.8 195 480-700 29-264 (793)
414 PRK15387 E3 ubiquitin-protein 99.9 1.8E-24 3.9E-29 240.5 17.0 263 12-327 201-463 (788)
415 KOG4237 Extracellular matrix p 99.9 4.8E-27 1E-31 229.4 -3.2 318 2-342 59-379 (498)
416 PRK15387 E3 ubiquitin-protein 99.9 5.9E-24 1.3E-28 236.4 17.0 256 1-308 213-468 (788)
417 KOG4237 Extracellular matrix p 99.9 1.4E-26 3E-31 226.2 -5.0 277 1-298 79-359 (498)
418 KOG0195 Integrin-linked kinase 99.9 5E-25 1.1E-29 204.7 5.2 249 428-706 191-447 (448)
419 PLN03210 Resistant to P. syrin 99.9 7.1E-23 1.5E-27 245.8 23.9 311 7-340 553-901 (1153)
420 PLN03210 Resistant to P. syrin 99.9 9.4E-23 2E-27 244.7 23.5 294 4-320 580-904 (1153)
421 KOG0618 Serine/threonine phosp 99.9 6.1E-26 1.3E-30 243.7 -5.0 302 1-323 57-421 (1081)
422 PRK09188 serine/threonine prot 99.9 3.7E-23 8.1E-28 213.3 15.1 167 423-605 14-195 (365)
423 KOG1164 Casein kinase (serine/ 99.9 1.1E-21 2.4E-26 203.9 19.4 261 428-708 19-300 (322)
424 KOG0590 Checkpoint kinase and 99.9 8.4E-23 1.8E-27 224.9 7.6 253 431-700 322-584 (601)
425 PRK15370 E3 ubiquitin-protein 99.9 5.8E-22 1.2E-26 222.2 13.4 247 12-298 178-428 (754)
426 COG0515 SPS1 Serine/threonine 99.9 1.4E-20 3E-25 198.4 22.8 258 429-701 2-275 (384)
427 KOG1163 Casein kinase (serine/ 99.9 9.8E-22 2.1E-26 180.0 11.8 264 425-707 13-286 (341)
428 KOG1165 Casein kinase (serine/ 99.9 1.8E-20 3.8E-25 179.7 18.4 262 427-707 28-301 (449)
429 PRK15370 E3 ubiquitin-protein 99.9 7.9E-22 1.7E-26 221.1 10.0 253 1-299 190-446 (754)
430 PRK10359 lipopolysaccharide co 99.8 4.6E-21 1E-25 183.3 9.5 172 424-624 28-216 (232)
431 KOG1023 Natriuretic peptide re 99.8 2.1E-20 4.5E-25 195.9 12.5 218 477-708 1-227 (484)
432 cd05147 RIO1_euk RIO kinase fa 99.8 2.4E-20 5.3E-25 177.1 11.4 141 432-579 2-168 (190)
433 PRK12274 serine/threonine prot 99.8 1.4E-19 2.9E-24 169.0 13.9 187 430-633 5-210 (218)
434 cd00116 LRR_RI Leucine-rich re 99.8 5.3E-22 1.2E-26 207.5 -2.8 283 16-321 2-319 (319)
435 KOG1240 Protein kinase contain 99.8 6.8E-21 1.5E-25 208.3 5.0 247 428-704 24-294 (1431)
436 KOG4158 BRPK/PTEN-induced prot 99.8 9.4E-20 2E-24 178.6 11.2 196 481-703 274-512 (598)
437 cd05145 RIO1_like RIO kinase f 99.8 4.7E-19 1E-23 169.2 14.7 140 432-579 2-168 (190)
438 PF14531 Kinase-like: Kinase-l 99.8 2.3E-19 5.1E-24 176.8 11.7 231 428-692 13-288 (288)
439 KOG0617 Ras suppressor protein 99.8 7.1E-21 1.5E-25 165.4 -3.2 157 113-274 29-186 (264)
440 cd00116 LRR_RI Leucine-rich re 99.8 2.4E-20 5.1E-25 195.0 -0.8 257 40-324 2-293 (319)
441 KOG0603 Ribosomal protein S6 k 99.8 6.2E-20 1.3E-24 191.7 2.3 225 434-695 1-232 (612)
442 PRK10345 hypothetical protein; 99.8 3.6E-18 7.9E-23 163.4 13.9 137 429-575 4-156 (210)
443 KOG0617 Ras suppressor protein 99.8 3.2E-20 6.9E-25 161.3 -1.9 161 164-329 32-193 (264)
444 KOG1166 Mitotic checkpoint ser 99.7 1.3E-17 2.7E-22 187.1 13.2 201 421-629 692-902 (974)
445 KOG0606 Microtubule-associated 99.7 2.8E-18 6E-23 188.1 6.2 216 426-700 82-311 (1205)
446 smart00090 RIO RIO-like kinase 99.7 4.3E-17 9.4E-22 160.2 11.7 143 427-579 28-199 (237)
447 PRK14879 serine/threonine prot 99.7 1.9E-16 4.1E-21 154.7 14.6 134 433-577 2-143 (211)
448 PRK09605 bifunctional UGMP fam 99.7 2.8E-16 6.1E-21 174.6 17.1 144 419-577 325-476 (535)
449 cd05144 RIO2_C RIO kinase fami 99.7 3.4E-16 7.4E-21 150.9 13.5 136 428-578 16-175 (198)
450 TIGR03724 arch_bud32 Kae1-asso 99.7 4.2E-16 9E-21 150.7 13.2 130 434-577 1-138 (199)
451 KOG1033 eIF-2alpha kinase PEK/ 99.7 3E-17 6.6E-22 168.5 2.7 172 496-696 329-507 (516)
452 cd05119 RIO RIO kinase family, 99.6 1.1E-14 2.4E-19 139.3 12.2 137 432-579 2-165 (187)
453 KOG0590 Checkpoint kinase and 99.6 1.4E-16 3E-21 175.9 -1.2 256 426-699 19-284 (601)
454 cd05120 APH_ChoK_like Aminogly 99.6 1.5E-14 3.2E-19 133.2 12.2 135 431-577 2-138 (155)
455 PRK01723 3-deoxy-D-manno-octul 99.5 6.1E-14 1.3E-18 138.3 13.5 136 432-578 36-192 (239)
456 KOG0532 Leucine-rich repeat (L 99.5 1.6E-15 3.4E-20 155.9 -2.9 176 140-324 74-249 (722)
457 KOG0532 Leucine-rich repeat (L 99.5 2.6E-15 5.7E-20 154.3 -1.9 194 40-274 54-247 (722)
458 COG4886 Leucine-rich repeat (L 99.5 8.1E-14 1.7E-18 149.9 9.2 199 72-280 97-296 (394)
459 KOG1909 Ran GTPase-activating 99.4 3.2E-15 7E-20 145.4 -3.4 200 112-322 87-311 (382)
460 KOG1909 Ran GTPase-activating 99.4 2.3E-15 5.1E-20 146.3 -4.7 259 8-298 26-311 (382)
461 COG4886 Leucine-rich repeat (L 99.4 1.6E-13 3.4E-18 147.6 8.1 264 40-324 97-360 (394)
462 TIGR01982 UbiB 2-polyprenylphe 99.4 7.8E-13 1.7E-17 141.9 13.3 144 427-579 118-308 (437)
463 KOG1243 Protein kinase [Genera 99.4 2.9E-12 6.3E-17 135.9 15.2 166 449-627 35-200 (690)
464 KOG1266 Protein kinase [Signal 99.4 3.7E-13 7.9E-18 129.8 7.2 202 476-701 120-331 (458)
465 PLN03150 hypothetical protein; 99.4 6.8E-13 1.5E-17 149.1 10.4 118 238-357 419-538 (623)
466 KOG0601 Cyclin-dependent kinas 99.4 6.1E-13 1.3E-17 140.0 6.7 248 427-700 114-378 (524)
467 KOG1259 Nischarin, modulator o 99.3 3E-13 6.5E-18 128.5 0.9 134 188-327 283-417 (490)
468 KOG1259 Nischarin, modulator o 99.3 4.8E-13 1E-17 127.2 1.6 131 164-300 283-414 (490)
469 KOG3207 Beta-tubulin folding c 99.3 2.4E-13 5.2E-18 136.0 -1.0 212 10-251 119-340 (505)
470 KOG0531 Protein phosphatase 1, 99.3 2.4E-13 5.2E-18 146.3 -1.2 246 66-326 70-322 (414)
471 PF14580 LRR_9: Leucine-rich r 99.3 2.6E-12 5.7E-17 118.0 4.9 65 113-178 60-126 (175)
472 PF14580 LRR_9: Leucine-rich r 99.3 2.2E-12 4.7E-17 118.6 4.1 124 188-315 18-146 (175)
473 KOG0531 Protein phosphatase 1, 99.3 4.7E-13 1E-17 144.1 -0.4 250 33-305 69-325 (414)
474 KOG3207 Beta-tubulin folding c 99.3 8.1E-13 1.8E-17 132.3 0.7 210 115-324 119-341 (505)
475 PRK04750 ubiB putative ubiquin 99.3 1.9E-11 4.2E-16 132.4 11.2 144 426-581 119-317 (537)
476 cd05151 ChoK Choline Kinase (C 99.2 2.4E-11 5.1E-16 114.1 9.1 132 432-577 3-136 (170)
477 KOG3087 Serine/threonine prote 99.2 2.3E-10 5.1E-15 102.2 13.0 142 431-577 11-165 (229)
478 PLN03150 hypothetical protein; 99.2 6.5E-11 1.4E-15 133.2 10.6 113 214-326 419-532 (623)
479 cd05146 RIO3_euk RIO kinase fa 99.2 3.9E-10 8.5E-15 105.9 13.8 136 433-579 3-175 (197)
480 KOG0601 Cyclin-dependent kinas 99.1 3.1E-11 6.6E-16 127.3 4.9 249 425-706 263-519 (524)
481 COG3642 Mn2+-dependent serine/ 99.1 8.1E-10 1.7E-14 99.6 12.7 132 433-578 2-141 (204)
482 KOG0606 Microtubule-associated 99.1 8.5E-12 1.8E-16 138.0 -0.1 253 422-696 799-1084(1205)
483 cd05154 ACAD10_11_like Acyl-Co 99.1 7E-10 1.5E-14 109.2 11.3 143 433-577 4-206 (223)
484 KOG4658 Apoptotic ATPase [Sign 99.0 2.6E-10 5.6E-15 130.9 6.8 275 34-324 521-809 (889)
485 KOG4658 Apoptotic ATPase [Sign 99.0 1.5E-10 3.2E-15 132.9 4.1 292 10-317 521-827 (889)
486 COG5238 RNA1 Ran GTPase-activa 99.0 2.6E-11 5.6E-16 114.1 -4.0 201 112-324 87-318 (388)
487 PF13855 LRR_8: Leucine rich r 98.9 9.6E-10 2.1E-14 83.1 4.2 61 12-80 1-61 (61)
488 PF13855 LRR_8: Leucine rich r 98.9 9.3E-10 2E-14 83.1 3.6 57 119-175 3-59 (61)
489 COG5238 RNA1 Ran GTPase-activa 98.9 1.2E-10 2.5E-15 109.7 -1.7 257 9-298 27-316 (388)
490 COG4248 Uncharacterized protei 98.9 6.7E-08 1.5E-12 97.3 16.1 265 431-711 15-306 (637)
491 KOG1859 Leucine-rich repeat pr 98.8 4.2E-11 9.1E-16 126.9 -7.8 127 191-324 166-294 (1096)
492 PF01163 RIO1: RIO1 family; I 98.8 4.2E-08 9.2E-13 92.0 12.3 125 442-578 1-156 (188)
493 KOG3741 Poly(A) ribonuclease s 98.8 1.5E-07 3.3E-12 97.4 16.5 167 440-629 289-475 (655)
494 PRK15123 lipopolysaccharide co 98.8 8.2E-08 1.8E-12 95.7 13.8 138 435-577 30-194 (268)
495 KOG1859 Leucine-rich repeat pr 98.7 3.8E-10 8.3E-15 119.8 -5.2 127 166-298 165-292 (1096)
496 KOG4579 Leucine-rich repeat (L 98.7 1.1E-09 2.4E-14 92.6 -2.9 134 190-327 28-164 (177)
497 KOG2982 Uncharacterized conser 98.7 5.3E-09 1.1E-13 100.1 1.2 79 237-315 199-285 (418)
498 COG0478 RIO-like serine/threon 98.7 1.9E-07 4.2E-12 89.6 11.3 135 429-577 93-251 (304)
499 KOG2137 Protein kinase [Signal 98.7 1E-08 2.3E-13 109.8 2.9 151 530-699 105-263 (700)
500 KOG2982 Uncharacterized conser 98.5 2.5E-08 5.3E-13 95.6 0.2 187 140-326 70-266 (418)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.1e-82 Score=761.22 Aligned_cols=674 Identities=29% Similarity=0.463 Sum_probs=479.8
Q ss_pred CCCCccccCCCCCcEEECCCCcceecCCcCCCCCCCCCEEEcccccccCccCCcccccccccccCccCCcEEeccCCCCc
Q 005040 2 GTIPNSITNATKLIGLDLGLNSFSGHIPNTFGNLRHLSVLSLMMNNLTTESSSADQWSFLSSLTNCRNLANLALASNPLG 81 (717)
Q Consensus 2 ~~iP~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~ 81 (717)
+.+|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.++...+. .+.++++|++|++++|.+.
T Consensus 250 ~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~--------~~~~l~~L~~L~l~~n~~~ 321 (968)
T PLN00113 250 GPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPE--------LVIQLQNLEILHLFSNNFT 321 (968)
T ss_pred cccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCCh--------hHcCCCCCcEEECCCCccC
Confidence 35677777777777777777777777777777777777777777777654322 2444555555555555555
Q ss_pred ccCCcchhccc-----------------------cccceeeecCCcceecCCccccCCCCCcEEEccCCCCcccCCcccc
Q 005040 82 GILPPLIGNFS-----------------------ASLQNIYAFECKLGGSIPKEIGNLRGLIVLSLGFNDLNGTIPTSIG 138 (717)
Q Consensus 82 ~~~~~~~~~l~-----------------------~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 138 (717)
+..|..+..++ ++|+.|++++|++.+.+|..+..+++|+.|++++|++.+..|..+.
T Consensus 322 ~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~ 401 (968)
T PLN00113 322 GKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLG 401 (968)
T ss_pred CcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHh
Confidence 44444444441 3344444444444444444444445555555555555555555555
Q ss_pred ccCCCCEEeccCCcccccCCccccCCCCCCEEeccCCcCcccCCccccCCCCCCeEEecCccccCCCChhhhcccCCCeE
Q 005040 139 TLQQLQGFYVPENNLQGYVPHDLCHLERLNILNLSGNKLSGAIPQCLASLTSLRSLYLQSNKLSSSLPSSLWSLEYILRI 218 (717)
Q Consensus 139 ~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 218 (717)
.+++|+.|++++|++++..|..|.++++|+.|+|++|.+++.++..+..+++|+.|+|++|++.+.+|..+ ..++|+.|
T Consensus 402 ~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L 480 (968)
T PLN00113 402 ACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENL 480 (968)
T ss_pred CCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEE
Confidence 56666666666666665566666666666666666666666666555666666666666666666555544 45678888
Q ss_pred EccCCcCcccCCccccCCCCCCeEEccCCCCCCCCcccccCCcccccccccCccccCCCCccccccCccceEeccCCCCC
Q 005040 219 NLSSNSLKGTLPSNIQKLNVLIDLDLSRNQLSSDIPSTIGTLKNLETLSLAGNQFQGPIPESVGNLISLESLDFSNNNLS 298 (717)
Q Consensus 219 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 298 (717)
++++|++++..|..+..+++|+.|+|++|.+.+.+|..+..+++|++|+|++|.+++.+|..+.++++|+.|+|++|+++
T Consensus 481 ~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 560 (968)
T PLN00113 481 DLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLS 560 (968)
T ss_pred ECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCccc
Confidence 88888888888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccccccccEEEccCCcccccccccccccccccccccCCccccCCC-CCCCCCCCCCCccCcCCccceeeeehhh
Q 005040 299 GKIPKSLEALSHLKQFNVSHNRLEGEIPVKGSFKDFSAQSYFGNYALCGPP-RLQVPPCKQDNRKRTNKVAPIVLQYILP 377 (717)
Q Consensus 299 ~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~-~~~~~~c~~~~~~~~~~~~~~~~~~~~~ 377 (717)
+.+|..+..+++|+.|++++|++.+.+|..+.+..+....+.||+.+|++. ....++|.... ....+ +.+++.
T Consensus 561 ~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~---~~~~~---~~~~~~ 634 (968)
T PLN00113 561 GEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVR---KTPSW---WFYITC 634 (968)
T ss_pred ccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCcccc---cccee---eeehhH
Confidence 999999999999999999999999999998888888888899999999864 33455674321 11111 111222
Q ss_pred hhhHHHHHHHHHhhhhhcccCCC---CCCCCCC--CCCCccc-CCCCHHHHHHHhccCCccccccccccEEEEEEEe-cC
Q 005040 378 SILSTVLLVIIIIMYVRCRNRST---KHLDHED--FLPPATR-RRTSYLDIRRATDEFNECNLLGTGGFGSVYKGTL-SD 450 (717)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~ 450 (717)
.++++++++++++.++++|+|+. ++...+. ....... ..............|...+.||+|+||.||+|.. .+
T Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~ 714 (968)
T PLN00113 635 TLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKN 714 (968)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccchhhhHHHHHhhCCcccEEccCCCeeEEEEEECCC
Confidence 22222222222222222222211 1111111 0000000 0011123344456678888999999999999997 48
Q ss_pred CCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHH
Q 005040 451 GTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIM 530 (717)
Q Consensus 451 ~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~ 530 (717)
++.||||++..... ...+|++.+++++|||||+++|++.+.+..++||||+++|+|.++++. ++|..+..++
T Consensus 715 ~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~----l~~~~~~~i~ 786 (968)
T PLN00113 715 GMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN----LSWERRRKIA 786 (968)
T ss_pred CcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc----CCHHHHHHHH
Confidence 89999998864322 123468899999999999999999999999999999999999999964 7899999999
Q ss_pred HHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcc
Q 005040 531 IDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTK 610 (717)
Q Consensus 531 ~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~ 610 (717)
.|+++|++|||+.+ +++|+|||+||+||+++.++.+++. ||....... .....+|++|+|||+..+..++.+
T Consensus 787 ~~ia~~L~yLH~~~-~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~ 858 (968)
T PLN00113 787 IGIAKALRFLHCRC-SPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT------DTKCFISSAYVAPETRETKDITEK 858 (968)
T ss_pred HHHHHHHHHhccCC-CCCeecCCCCHHhEEECCCCceEEE-ecccccccc------CCCccccccccCcccccCCCCCcc
Confidence 99999999999654 5689999999999999999988876 665543321 122357899999999999999999
Q ss_pred cchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCC-chhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCC
Q 005040 611 CDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPH-RLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTP 689 (717)
Q Consensus 611 ~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P 689 (717)
+|||||||++|||+||+.||+..........+|....... .....+|+.+.... ....+...++.+++.+||+.||
T Consensus 859 sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~Cl~~~P 935 (968)
T PLN00113 859 SDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDV---SVNQNEIVEVMNLALHCTATDP 935 (968)
T ss_pred cchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCC---CccHHHHHHHHHHHHhhCcCCc
Confidence 9999999999999999999976656666777787654433 23444555443221 1123445678899999999999
Q ss_pred CCCCCHHHHHHHHHHhHHhh
Q 005040 690 HKRIHMTDAAAKLRKIKAKF 709 (717)
Q Consensus 690 ~~Rpt~~ev~~~L~~~~~~~ 709 (717)
++||||.||++.|+++.+..
T Consensus 936 ~~RPt~~evl~~L~~~~~~~ 955 (968)
T PLN00113 936 TARPCANDVLKTLESASRSS 955 (968)
T ss_pred hhCcCHHHHHHHHHHhhccc
Confidence 99999999999999986643
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-51 Score=423.61 Aligned_cols=289 Identities=45% Similarity=0.702 Sum_probs=247.7
Q ss_pred ccCCCCHHHHHHHhccCCccccccccccEEEEEEEecCCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeee
Q 005040 413 TRRRTSYLDIRRATDEFNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSC 492 (717)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~ 492 (717)
....++|.+++.+|++|...+.||+|+||+||+|..++|+.||||++.....+..++|..|++++.+++|||+|+++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 45678999999999999999999999999999999999999999988765433145599999999999999999999999
Q ss_pred ecCC-eeEEEEEccCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEe
Q 005040 493 SNLD-FKALVLEFMPNGSLEKWLYSHNY-FLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVS 570 (717)
Q Consensus 493 ~~~~-~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~ 570 (717)
.+.+ +.++|||||++|+|.++++.... .++|.+|.+|+.++|+||+|||+.+ .++|+|||||++|||+|+++++||+
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~-~~~iiHrDiKssNILLD~~~~aKls 219 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGC-PPPIIHRDIKSSNILLDEDFNAKLS 219 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCC-CCCEecCCCCHHHeeECCCCCEEcc
Confidence 9988 59999999999999999997665 7999999999999999999999866 5589999999999999999999999
Q ss_pred eeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccc-cCcchHHHHHHhhCC
Q 005040 571 DFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMF-TGEMSLRRWVKESLP 649 (717)
Q Consensus 571 Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~-~~~~~~~~~~~~~~~ 649 (717)
|||+|+......... .....||.+|+|||+...+..+.|+|||||||+++|++||+.|.+... .++..+..|+.....
T Consensus 220 DFGLa~~~~~~~~~~-~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~ 298 (361)
T KOG1187|consen 220 DFGLAKLGPEGDTSV-STTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLE 298 (361)
T ss_pred CccCcccCCccccce-eeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHH
Confidence 999996654311111 111179999999999999999999999999999999999999987643 345568999877666
Q ss_pred C-chhhhccccchh-hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHH
Q 005040 650 H-RLTEVVDANLVR-EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKA 707 (717)
Q Consensus 650 ~-~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~ 707 (717)
. .+.+++|+.+.. .+. ..+....+..++.+|++.+|.+||+|.||++.|+.+..
T Consensus 299 ~~~~~eiiD~~l~~~~~~----~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 299 EGKLREIVDPRLKEGEYP----DEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred CcchhheeCCCccCCCCC----hHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 5 688999999873 221 11455668999999999999999999999999976644
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-48 Score=380.32 Aligned_cols=255 Identities=24% Similarity=0.330 Sum_probs=212.6
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCC-eeEEEE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLD-FKALVL 502 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~-~~~lv~ 502 (717)
..+.+..+.||+|..|+||++.++ +++.+|+|++.... ....+++.+|++++++.+||+||+++|.|.... ..+++|
T Consensus 78 ~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~m 157 (364)
T KOG0581|consen 78 LSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICM 157 (364)
T ss_pred HHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeeh
Confidence 346667789999999999999987 78889999995444 345578999999999999999999999999988 499999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
|||++|+|.+++...+ .+++.....++.+|++||.|||+ +++|+||||||+|||++..|+|||||||.+..+...
T Consensus 158 EYMDgGSLd~~~k~~g-~i~E~~L~~ia~~VL~GL~YLh~---~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS- 232 (364)
T KOG0581|consen 158 EYMDGGSLDDILKRVG-RIPEPVLGKIARAVLRGLSYLHE---ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS- 232 (364)
T ss_pred hhcCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhh---ccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh-
Confidence 9999999999998764 48999999999999999999995 478999999999999999999999999999887543
Q ss_pred CceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchh
Q 005040 583 DSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVR 662 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (717)
......||..|||||.+.+..|+.++||||||++++|+.+|+.||....+.... +.+.++.-..+
T Consensus 233 ---~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~------------~~~Ll~~Iv~~ 297 (364)
T KOG0581|consen 233 ---IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLD------------IFELLCAIVDE 297 (364)
T ss_pred ---hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCC------------HHHHHHHHhcC
Confidence 446678999999999999999999999999999999999999999764121111 11222222222
Q ss_pred hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 663 EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 663 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
+.+..+.. .+++++.+++..|+++||.+||+++|+++.
T Consensus 298 ppP~lP~~-~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 298 PPPRLPEG-EFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred CCCCCCcc-cCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 22222222 478889999999999999999999999864
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-47 Score=389.68 Aligned_cols=262 Identities=30% Similarity=0.475 Sum_probs=215.2
Q ss_pred ccCCccccccccccEEEEEEEecCCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCC-eeEEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLD-FKALVLE 503 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~-~~~lv~e 503 (717)
.++...+.+|+|+||+||+|.++....||||++.... ....+.|.+|+.+|++++|||||+++|+|.+.. ..++|||
T Consensus 41 ~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtE 120 (362)
T KOG0192|consen 41 DELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTE 120 (362)
T ss_pred HHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEE
Confidence 3444556699999999999999644449999997654 222568999999999999999999999998887 7899999
Q ss_pred ccCCCCHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCC-eEecCCCCCCeeeCCCC-cEEEeeeccccccCC
Q 005040 504 FMPNGSLEKWLYS-HNYFLDILQRLNIMIDVGSALEYLHHCHSSAP-IIHCDLKPTNILLDENM-VAHVSDFGISKLLGE 580 (717)
Q Consensus 504 ~~~~g~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~-ivH~dlk~~Nill~~~~-~~kl~Dfgl~~~~~~ 580 (717)
|+++|+|.++++. ....+++..+..++.|||+|+.||| +.+ |||||||++|||++.++ ++||+|||+++....
T Consensus 121 y~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH----~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~ 196 (362)
T KOG0192|consen 121 YMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLH----SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVI 196 (362)
T ss_pred eCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh----cCCCeeecccChhhEEEcCCCCEEEECCCccceeecc
Confidence 9999999999998 4677999999999999999999999 566 99999999999999998 999999999987653
Q ss_pred CCCceeeeccccCccccCCCccC--CCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccc
Q 005040 581 GEDSVIQTMTMATIGYMAPEYGS--EGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDA 658 (717)
Q Consensus 581 ~~~~~~~~~~~~t~~y~aPE~~~--~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (717)
.. ...+...||..|||||++. ...|+.|+|||||||++|||+||+.||..... ......+.....
T Consensus 197 ~~--~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~--~~~~~~v~~~~~--------- 263 (362)
T KOG0192|consen 197 SK--TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP--VQVASAVVVGGL--------- 263 (362)
T ss_pred cc--ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH--HHHHHHHHhcCC---------
Confidence 22 2223467999999999999 67999999999999999999999999987644 222222111100
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHhhccc
Q 005040 659 NLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKAKFLDD 712 (717)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~~~~~~ 712 (717)
.. ..+..|+..+..++.+||..||+.||++.+++..|+.+...+..+
T Consensus 264 --Rp-----~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~~ 310 (362)
T KOG0192|consen 264 --RP-----PIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISSA 310 (362)
T ss_pred --CC-----CCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhccc
Confidence 00 011126677889999999999999999999999999998876653
No 5
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-47 Score=386.47 Aligned_cols=258 Identities=31% Similarity=0.515 Sum_probs=218.4
Q ss_pred ccCCccccccccccEEEEEEEecCCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccC
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMP 506 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 506 (717)
+.+..++.||+|.||.||.|.++....||+|.++... -..++|.+|+++|++|+|++||+++|+|..++.+|||||||+
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~ 284 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMP 284 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecc
Confidence 3455678999999999999999877799999987652 233678899999999999999999999999889999999999
Q ss_pred CCCHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCce
Q 005040 507 NGSLEKWLYS-HNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSV 585 (717)
Q Consensus 507 ~g~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 585 (717)
.|+|.+|++. .+..+...+...++.|||+|++||+ ++++|||||.++||||+++..+||+|||+|+...... ..
T Consensus 285 ~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLe----s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~-Y~ 359 (468)
T KOG0197|consen 285 KGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLE----SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDE-YT 359 (468)
T ss_pred cCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHH----hCCccchhhhhhheeeccCceEEEcccccccccCCCc-ee
Confidence 9999999997 5667899999999999999999999 7899999999999999999999999999999554333 33
Q ss_pred eeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhh
Q 005040 586 IQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREE 664 (717)
Q Consensus 586 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (717)
......-+..|.|||.+..+.++.|||||||||+||||+| |+.||..+...+ ..+.++...
T Consensus 360 ~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e--------------v~~~le~Gy---- 421 (468)
T KOG0197|consen 360 ASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE--------------VLELLERGY---- 421 (468)
T ss_pred ecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH--------------HHHHHhccC----
Confidence 3344445888999999999999999999999999999999 888987753221 112222222
Q ss_pred hhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHhh
Q 005040 665 QAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKAKF 709 (717)
Q Consensus 665 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~~~ 709 (717)
..+.+..|+.++.++|..||+.+|++|||++.+...|+.+....
T Consensus 422 -Rlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~ 465 (468)
T KOG0197|consen 422 -RLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTST 465 (468)
T ss_pred -cCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence 23455679999999999999999999999999999999876544
No 6
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4e-46 Score=383.59 Aligned_cols=247 Identities=25% Similarity=0.352 Sum_probs=211.3
Q ss_pred ccCCccccccccccEEEEEEEe-cCCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTL-SDGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
.+|...+.||+|+|+.||.++. ..|..||+|++.+.. ....+.+.+|+++.++|+|||||+++++|++..++|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5799999999999999999997 789999999998754 455678899999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
|.|.+++|..+++ ..+.+++..++.++.||+.||.||| +.+|+|||||..|++++++.+|||+|||+|..+...+
T Consensus 98 ELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH----~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~ 172 (592)
T KOG0575|consen 98 ELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLH----SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG 172 (592)
T ss_pred EecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHH----hcCceecccchhheeecCcCcEEecccceeeeecCcc
Confidence 9999999999988 4556999999999999999999999 7889999999999999999999999999999886443
Q ss_pred CceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchh
Q 005040 583 DSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVR 662 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (717)
. .....+|||.|.|||++.....+..+||||+|||||-|+.|++||+...-. ..+.+. + .
T Consensus 173 E--rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vk-ety~~I-k----------------~ 232 (592)
T KOG0575|consen 173 E--RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVK-ETYNKI-K----------------L 232 (592)
T ss_pred c--ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHH-HHHHHH-H----------------h
Confidence 2 234568999999999999999999999999999999999999999762110 011110 0 0
Q ss_pred hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 663 EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 663 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
..+.-+...+.++.+||.++|+.||.+|||+++|+.
T Consensus 233 --~~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 233 --NEYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred --cCcccccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 011112245667889999999999999999999985
No 7
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-46 Score=364.37 Aligned_cols=200 Identities=33% Similarity=0.534 Sum_probs=182.0
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechh--hHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQ--LERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
..+|...+.||+|+||+||+|+++ ++..||||.+.+. ..+..+....|+++|+.++|||||++++++.+.+..|+||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 468888899999999999999976 7899999999766 3556677889999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCC------CcEEEeeecccc
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDEN------MVAHVSDFGISK 576 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~------~~~kl~Dfgl~~ 576 (717)
|||.||||.+|++..+. +++.++..++.|+|.||++|| +++||||||||.|||++.. -.+||+|||+|+
T Consensus 89 EyC~gGDLs~yi~~~~~-l~e~t~r~Fm~QLA~alq~L~----~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR 163 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRGR-LPEATARHFMQQLASALQFLH----ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR 163 (429)
T ss_pred EeCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH----HCCeeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence 99999999999998764 899999999999999999999 6889999999999999865 568999999999
Q ss_pred ccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCcc
Q 005040 577 LLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEM 633 (717)
Q Consensus 577 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~ 633 (717)
.+.+.. .....+|++-|||||++...+|+.|+|+||+|+++|||++|+.||+..
T Consensus 164 ~L~~~~---~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 164 FLQPGS---MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred hCCchh---HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 986432 335668999999999999999999999999999999999999999863
No 8
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.2e-46 Score=365.30 Aligned_cols=253 Identities=29% Similarity=0.385 Sum_probs=206.1
Q ss_pred HhccCCccccccccccEEEEEEEe-cCCCeEEEEEechhhH-------HHHHHHHHHHHHHHhcCCCceeeEeeeeecCC
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTL-SDGTNVAIKIFNLQLE-------RAFRSFDSECEILRNVRHRNLLKILGSCSNLD 496 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~ 496 (717)
..+.|.+.+.||+|+||.|-+|.. ++|+.||||++.+... .....+.+|+++|++|+|||||+++++|+..+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 346788889999999999999985 4899999999976541 12234678999999999999999999999999
Q ss_pred eeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCC---CcEEEeeec
Q 005040 497 FKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDEN---MVAHVSDFG 573 (717)
Q Consensus 497 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg 573 (717)
..||||||++||+|.+++-.++. +.+.....+++|++.|+.||| ++||+||||||+|||+..+ ..+||+|||
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk~-l~ed~~K~~f~Qll~avkYLH----~~GI~HRDiKPeNILl~~~~e~~llKItDFG 324 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANKY-LREDLGKLLFKQLLTAVKYLH----SQGIIHRDIKPENILLSNDAEDCLLKITDFG 324 (475)
T ss_pred ceEEEEEEecCccHHHHHHhccc-cccchhHHHHHHHHHHHHHHH----HcCcccccCCcceEEeccCCcceEEEecccc
Confidence 99999999999999999987654 777778889999999999999 7899999999999999866 789999999
Q ss_pred cccccCCCCCceeeeccccCccccCCCccCCCCc---CcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCC
Q 005040 574 ISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIV---STKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPH 650 (717)
Q Consensus 574 l~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~---~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 650 (717)
+|+..++.. .....+||+.|.|||++.++.+ ..+.|+||+||++|-+++|.+||.+..... .+.+.+..
T Consensus 325 lAK~~g~~s---fm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~-sl~eQI~~---- 396 (475)
T KOG0615|consen 325 LAKVSGEGS---FMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP-SLKEQILK---- 396 (475)
T ss_pred hhhccccce---ehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc-cHHHHHhc----
Confidence 999886433 2356789999999999877653 347899999999999999999998743322 12222211
Q ss_pred chhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 651 RLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.++.-. ...+.+.+++..++|..||..||++|||+.|+++
T Consensus 397 -------G~y~f~---p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 397 -------GRYAFG---PLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred -------Cccccc---ChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 111000 0223456778999999999999999999999986
No 9
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-46 Score=349.54 Aligned_cols=258 Identities=22% Similarity=0.341 Sum_probs=207.9
Q ss_pred hccCCccccccccccEEEEEEEe-cCCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeee-e-ecCCeeEE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTL-SDGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGS-C-SNLDFKAL 500 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~-~-~~~~~~~l 500 (717)
..+|++.++||+|.||+||++.. .+|..||.|.+.-.. .+..++..+|+.+|++|+|||||+++++ + ++.+.+++
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlni 97 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNI 97 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHH
Confidence 35788899999999999999984 599999999887443 4556788999999999999999999993 3 44455899
Q ss_pred EEEccCCCCHHHHHh---hCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccc
Q 005040 501 VLEFMPNGSLEKWLY---SHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKL 577 (717)
Q Consensus 501 v~e~~~~g~L~~~l~---~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 577 (717)
|||+|.+|||.++++ +.++.+++..+|+++.|++.||.++|..-...-|.||||||.||+++.+|.|||+|||+++.
T Consensus 98 vmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 98 VMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 999999999999997 45677999999999999999999999522123399999999999999999999999999998
Q ss_pred cCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhcc
Q 005040 578 LGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVD 657 (717)
Q Consensus 578 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (717)
+... .......+|||.||+||.+.+..|+.||||||+||++|||+.-++||.+. .-..+.+-+.+ .
T Consensus 178 l~s~--~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~--n~~~L~~KI~q--------g-- 243 (375)
T KOG0591|consen 178 LSSK--TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD--NLLSLCKKIEQ--------G-- 243 (375)
T ss_pred hcch--hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc--cHHHHHHHHHc--------C--
Confidence 8543 23345678999999999999999999999999999999999999999763 11111111111 0
Q ss_pred ccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 005040 658 ANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLR 703 (717)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~ 703 (717)
+.+. ..+..++.++..+|.-|+.+||+.||+.-..++.+.
T Consensus 244 -----d~~~-~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 244 -----DYPP-LPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred -----CCCC-CcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 1110 112467788999999999999999998655544443
No 10
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-44 Score=351.06 Aligned_cols=243 Identities=28% Similarity=0.338 Sum_probs=203.0
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALV 501 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv 501 (717)
.++|++.+.||+|+||.||+++.+ +++.+|+|++++.. ....+...+|..+|.+++||.||+++..|++.+.+|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 578999999999999999999865 78999999998765 33457788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCC
Q 005040 502 LEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEG 581 (717)
Q Consensus 502 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 581 (717)
+||+.||.|..+|++++. +++..+.-++..|+.||.||| +.+|||||+||+|||+|.+|+++|+|||+++.....
T Consensus 104 ld~~~GGeLf~hL~~eg~-F~E~~arfYlaEi~lAL~~LH----~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~ 178 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREGR-FSEDRARFYLAEIVLALGYLH----SKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKD 178 (357)
T ss_pred EeccCCccHHHHHHhcCC-cchhHHHHHHHHHHHHHHHHH----hCCeeeccCCHHHeeecCCCcEEEeccccchhcccC
Confidence 999999999999997765 788888889999999999999 789999999999999999999999999999865333
Q ss_pred CCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccch
Q 005040 582 EDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLV 661 (717)
Q Consensus 582 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (717)
.. .....+||+.|||||++.+..|+..+|+||+|+++|||++|.+||.+... .+++....... ..
T Consensus 179 ~~--~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~-----~~~~~~I~~~k--------~~ 243 (357)
T KOG0598|consen 179 GD--ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV-----KKMYDKILKGK--------LP 243 (357)
T ss_pred CC--ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH-----HHHHHHHhcCc--------CC
Confidence 22 23457899999999999999999999999999999999999999976321 12222111111 00
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCC
Q 005040 662 REEQAFSDKMDCLFSIMDLALDCCMDTPHKRIH 694 (717)
Q Consensus 662 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt 694 (717)
..+.-.+.+..+++.+.+..||++|..
T Consensus 244 ------~~p~~ls~~ardll~~LL~rdp~~RLg 270 (357)
T KOG0598|consen 244 ------LPPGYLSEEARDLLKKLLKRDPRQRLG 270 (357)
T ss_pred ------CCCccCCHHHHHHHHHHhccCHHHhcC
Confidence 001113456789999999999999974
No 11
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=3.1e-44 Score=337.37 Aligned_cols=265 Identities=22% Similarity=0.267 Sum_probs=206.2
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhhH--HHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLE--RAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLE 503 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 503 (717)
++|+...++|+|+||+||+++.+ +|+.||||++....+ ...+-.++|+++|++++|||+|.++++|......++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 46888899999999999999987 799999999965442 233456899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 504 FMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 504 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
||+. ++.+-++......+...+.+++.|+++|+.|+| +++++||||||+|||++.+|.+||||||+|+.+....
T Consensus 82 ~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cH----k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg- 155 (396)
T KOG0593|consen 82 YCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCH----KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPG- 155 (396)
T ss_pred ecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhh----hcCeecccCChhheEEecCCcEEeccchhhHhhcCCc-
Confidence 9986 666667766666899999999999999999999 7899999999999999999999999999999886432
Q ss_pred ceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhh---CCCchhhhcccc
Q 005040 584 SVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKES---LPHRLTEVVDAN 659 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 659 (717)
..++..+.|.+|+|||.+.+ .+|+..+||||+||++.||++|.+-|.+. ++.+....+... ...+-..++...
T Consensus 156 -d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~--SDiDQLy~I~ktLG~L~prhq~iF~~N 232 (396)
T KOG0593|consen 156 -DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGR--SDIDQLYLIRKTLGNLIPRHQSIFSSN 232 (396)
T ss_pred -chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCc--chHHHHHHHHHHHcccCHHHHHHhccC
Confidence 23455678999999998776 78999999999999999999999988653 222222222111 111112222110
Q ss_pred -------chh---hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 660 -------LVR---EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 660 -------~~~---~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
++. ..+........+..+.+++..|++.||++|++.+|++.
T Consensus 233 ~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 233 PFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred CceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 000 00000111223446889999999999999999999874
No 12
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7.8e-44 Score=381.05 Aligned_cols=263 Identities=29% Similarity=0.471 Sum_probs=221.8
Q ss_pred HhccCCccccccccccEEEEEEEec------CCCeEEEEEechhhHH-HHHHHHHHHHHHHhcCCCceeeEeeeeecCCe
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTLS------DGTNVAIKIFNLQLER-AFRSFDSECEILRNVRHRNLLKILGSCSNLDF 497 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~ 497 (717)
...+....+.||+|+||.||+|+.. +...||||.++...+. ..++|.+|+++++.++|||||+++|.|.+++.
T Consensus 484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P 563 (774)
T KOG1026|consen 484 PRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDP 563 (774)
T ss_pred chhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe
Confidence 3455566789999999999999853 4566999999877755 77899999999999999999999999999999
Q ss_pred eEEEEEccCCCCHHHHHhhC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCC
Q 005040 498 KALVLEFMPNGSLEKWLYSH-------------NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDEN 564 (717)
Q Consensus 498 ~~lv~e~~~~g~L~~~l~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~ 564 (717)
++||+|||..|||.+||+.. +.+++..+...||.|||.|+.||- ++.+|||||.++|+||.++
T Consensus 564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs----~~~FVHRDLATRNCLVge~ 639 (774)
T KOG1026|consen 564 LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS----SHHFVHRDLATRNCLVGEN 639 (774)
T ss_pred eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH----hCcccccchhhhhceeccc
Confidence 99999999999999999842 123788999999999999999999 6779999999999999999
Q ss_pred CcEEEeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHH
Q 005040 565 MVAHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRW 643 (717)
Q Consensus 565 ~~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~ 643 (717)
..|||+|||+++.+-..++........-+++|||||.+..+.||.+||||||||+|||+++ |+.||.+....+. .+.
T Consensus 640 l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EV--Ie~ 717 (774)
T KOG1026|consen 640 LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEV--IEC 717 (774)
T ss_pred eEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHH--HHH
Confidence 9999999999998766555554445556899999999999999999999999999999999 9999877433211 111
Q ss_pred HHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHhhc
Q 005040 644 VKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKAKFL 710 (717)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~~~~ 710 (717)
++ . ....+.+..|+.++++||..||+..|++||+++|+-..|+...+.-+
T Consensus 718 i~-----------~------g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~ 767 (774)
T KOG1026|consen 718 IR-----------A------GQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASP 767 (774)
T ss_pred HH-----------c------CCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCc
Confidence 11 1 11234556899999999999999999999999999999998865433
No 13
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-44 Score=355.58 Aligned_cols=267 Identities=24% Similarity=0.275 Sum_probs=209.0
Q ss_pred HhccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHH-HHHHHHHHHHhcC-CCceeeEeeeeecCC-eeEE
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFR-SFDSECEILRNVR-HRNLLKILGSCSNLD-FKAL 500 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~-~~~~e~~~l~~l~-hpniv~~~~~~~~~~-~~~l 500 (717)
..++|..+++||.|.||.||+|+.. +|..||||.++..-..+.+ .=.+|++.|++++ |||||++.+++.+.+ .+|+
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 4578999999999999999999965 7899999999766533322 2357999999998 999999999998888 9999
Q ss_pred EEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCC
Q 005040 501 VLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGE 580 (717)
Q Consensus 501 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 580 (717)
|||||+ .+|++.++.+++.+++..+..|+.||++||+|+| .+|+.|||+||+|||+.....+||+|||+|+.+..
T Consensus 88 VfE~Md-~NLYqLmK~R~r~fse~~irnim~QilqGL~hiH----k~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 88 VFEFMD-CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIH----KHGFFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred eHHhhh-hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHH----hcCcccccCChhheEecccceeEeccccccccccc
Confidence 999996 5999999988999999999999999999999999 78999999999999999999999999999998754
Q ss_pred CCCceeeeccccCccccCCCc-cCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCc----hh--
Q 005040 581 GEDSVIQTMTMATIGYMAPEY-GSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHR----LT-- 653 (717)
Q Consensus 581 ~~~~~~~~~~~~t~~y~aPE~-~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~----~~-- 653 (717)
. ..++..+.|.+|+|||+ +..+.|+.+.|+||+|||++|+.+-++-|.+..+-+ ++.+ +.+.+-.. +.
T Consensus 163 k---pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~D-qi~K-Ic~VLGtP~~~~~~eg 237 (538)
T KOG0661|consen 163 K---PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEID-QIYK-ICEVLGTPDKDSWPEG 237 (538)
T ss_pred C---CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHH-HHHH-HHHHhCCCccccchhH
Confidence 3 33466678999999996 567889999999999999999999999887632211 1111 11111110 10
Q ss_pred ----hhccccchhhhh--hhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 654 ----EVVDANLVREEQ--AFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 654 ----~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
..+.-++....+ -..-...++.++.++|.+|+++||.+||||+|+++.
T Consensus 238 ~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 238 YNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 111111100000 000011356788999999999999999999999864
No 14
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=7.6e-43 Score=322.69 Aligned_cols=267 Identities=25% Similarity=0.333 Sum_probs=209.5
Q ss_pred ccCCccccccccccEEEEEEEe-cCCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTL-SDGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLE 503 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 503 (717)
.+|...+++|+|.||.||+|+. .+|+.||||.++... +.......+|++.|+.++||||+.++++|...+.+.+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 4677888999999999999985 489999999997654 2223567889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 504 FMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 504 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
||+. +|+..++.....++..++..++.++++|++||| ++.|+|||+||.|+|++++|.+||+|||+++.++....
T Consensus 82 fm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H----~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~ 156 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCH----SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR 156 (318)
T ss_pred eccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHH----hhhhhcccCCccceEEcCCCcEEeecccchhccCCCCc
Confidence 9975 999999998888999999999999999999999 78899999999999999999999999999999876554
Q ss_pred ceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhC---CCchhhh---c
Q 005040 584 SVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESL---PHRLTEV---V 656 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~---~ 656 (717)
.. ...+.|.+|+|||.+.+ +.|+...|+||.||++.||+-|.+-|.+. .+-.++........ ++.+.++ -
T Consensus 157 ~~--~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~-sDidQL~~If~~LGTP~~~~WP~~~~lp 233 (318)
T KOG0659|consen 157 IQ--THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGD-SDIDQLSKIFRALGTPTPDQWPEMTSLP 233 (318)
T ss_pred cc--ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCC-chHHHHHHHHHHcCCCCcccCccccccc
Confidence 33 33378999999997766 56999999999999999999988776552 12222222222211 1112221 1
Q ss_pred cccchhhhhh---hhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 657 DANLVREEQA---FSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 657 ~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
|..-....+. ..--..++.++.+++..|+..||.+|++++|+++.
T Consensus 234 dY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 234 DYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 1100000000 00112345667999999999999999999999864
No 15
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-43 Score=355.74 Aligned_cols=254 Identities=24% Similarity=0.374 Sum_probs=211.1
Q ss_pred HHHhccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCCe
Q 005040 423 RRATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNV-RHRNLLKILGSCSNLDF 497 (717)
Q Consensus 423 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~ 497 (717)
++...+|...+.||+|+|++|++|+.. .++.+|||++.+.. +...+.+..|-.+|.+| .||.|++++..|+|...
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 455678999999999999999999865 79999999997653 33345567799999999 89999999999999999
Q ss_pred eEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccc
Q 005040 498 KALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKL 577 (717)
Q Consensus 498 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 577 (717)
+|+|+||+++|+|.++|++.+. +++...+.++.+|+.||+||| +.|||||||||+|||+|.+++++|+|||.|+.
T Consensus 149 LYFvLe~A~nGdll~~i~K~Gs-fde~caR~YAAeIldAleylH----~~GIIHRDlKPENILLd~dmhikITDFGsAK~ 223 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYGS-FDETCARFYAAEILDALEYLH----SNGIIHRDLKPENILLDKDGHIKITDFGSAKI 223 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhCc-chHHHHHHHHHHHHHHHHHHH----hcCceeccCChhheeEcCCCcEEEeecccccc
Confidence 9999999999999999998754 899999999999999999999 89999999999999999999999999999998
Q ss_pred cCCCCCc---------ee--eeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHh
Q 005040 578 LGEGEDS---------VI--QTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKE 646 (717)
Q Consensus 578 ~~~~~~~---------~~--~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~ 646 (717)
+.+.... .. ....+||..|.+||++..+..+..+|+|+||||+|+|+.|++||.+..+ +..+
T Consensus 224 l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne----yliF--- 296 (604)
T KOG0592|consen 224 LSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE----YLIF--- 296 (604)
T ss_pred CChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH----HHHH---
Confidence 7643221 11 1447899999999999999999999999999999999999999976321 1111
Q ss_pred hCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 647 SLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
..+++-.+ .-+..+++.+.+|+.+.|..||.+|+|++|+.+.
T Consensus 297 ------qkI~~l~y-------~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 297 ------QKIQALDY-------EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred ------HHHHHhcc-------cCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 11111110 1112445678899999999999999999887764
No 16
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.6e-43 Score=351.69 Aligned_cols=266 Identities=27% Similarity=0.336 Sum_probs=209.9
Q ss_pred hccCCccccccccccEEEEEEEe-cCCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecC--CeeEE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTL-SDGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNL--DFKAL 500 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~--~~~~l 500 (717)
.+.|+.+.+||+|.||.||+|+. .+|+.||+|++.... .+......+|+.+|++|.||||+++.+...+. +.+||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 35677888999999999999985 489999999987665 34445667899999999999999999998776 78999
Q ss_pred EEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCC
Q 005040 501 VLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGE 580 (717)
Q Consensus 501 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 580 (717)
|+|||+. ||..++...+..+++.++..+++|++.||+|+| +++|+|||||.+|||+|.+|.+||+|||+|+++..
T Consensus 196 VFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH----~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~ 270 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCH----SRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTP 270 (560)
T ss_pred EEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHh----hcCeeeccccccceEEcCCCCEEeccccceeeccC
Confidence 9999987 999999988778999999999999999999999 78999999999999999999999999999998865
Q ss_pred CCCceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHH------------HHHhh
Q 005040 581 GEDSVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRR------------WVKES 647 (717)
Q Consensus 581 ~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~------------~~~~~ 647 (717)
... ...+..+.|.+|+|||.+.+ ..|+.+.|+||.|||+.||++|++.|.+..+ -.++.. |-...
T Consensus 271 ~~~-~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tE-veQl~kIfklcGSP~e~~W~~~k 348 (560)
T KOG0600|consen 271 SGS-APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTE-VEQLHKIFKLCGSPTEDYWPVSK 348 (560)
T ss_pred CCC-cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccH-HHHHHHHHHHhCCCChhcccccc
Confidence 432 33567788999999997665 5699999999999999999999999876321 112222 22111
Q ss_pred CCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 648 LPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.|. ...+.+.-.-...-......++...++|+..+|..||.+|.||.++++
T Consensus 349 LP~--~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 349 LPH--ATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred CCc--ccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 111 001110000000001112345567889999999999999999999875
No 17
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-43 Score=357.84 Aligned_cols=263 Identities=24% Similarity=0.425 Sum_probs=213.0
Q ss_pred HHhccCCccccccccccEEEEEEEecCCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEE
Q 005040 424 RATDEFNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALV 501 (717)
Q Consensus 424 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv 501 (717)
+..+++.+...||+|.||+||+|+|- ..||||++.... .+..+.|+.|+.++++-+|.||+-|.|||..... .+|
T Consensus 389 Ip~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIi 465 (678)
T KOG0193|consen 389 IPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AII 465 (678)
T ss_pred cCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eee
Confidence 34466778889999999999999984 359999997654 4577899999999999999999999999998887 999
Q ss_pred EEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCC
Q 005040 502 LEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEG 581 (717)
Q Consensus 502 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 581 (717)
+.||+|.+|+.+++-....++..+.+.|++|||+|+.||| .++|+|||||..||++++++.|||+|||++..-..-
T Consensus 466 TqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLH----AK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w 541 (678)
T KOG0193|consen 466 TQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLH----AKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRW 541 (678)
T ss_pred ehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhh----hhhhhhhhccccceEEccCCcEEEecccceeeeeee
Confidence 9999999999999977777999999999999999999999 789999999999999999999999999998754322
Q ss_pred CCceeeeccccCccccCCCccCC---CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccc
Q 005040 582 EDSVIQTMTMATIGYMAPEYGSE---GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDA 658 (717)
Q Consensus 582 ~~~~~~~~~~~t~~y~aPE~~~~---~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (717)
..........|..-|||||++.. ..|++.+||||||+++|||+||..||.....+. +--++..
T Consensus 542 ~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dq--------------IifmVGr 607 (678)
T KOG0193|consen 542 SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQ--------------IIFMVGR 607 (678)
T ss_pred ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhh--------------eEEEecc
Confidence 11122223356778999998754 469999999999999999999999997532221 1111111
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHh
Q 005040 659 NLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKAK 708 (717)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~~ 708 (717)
.+... +.......|++++.+|+..||..++++||.+.+++..|+++...
T Consensus 608 G~l~p-d~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 608 GYLMP-DLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred cccCc-cchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 11100 01122346788999999999999999999999999999988764
No 18
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-42 Score=344.85 Aligned_cols=256 Identities=29% Similarity=0.399 Sum_probs=204.5
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCC--eeEEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLD--FKALVLE 503 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e 503 (717)
.+|...+.||+|+||+||++... +|...|||..........+.+.+|+++|++++|||||+++|.....+ .+++.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 45777889999999999999975 58999999887664333667889999999999999999999855554 5899999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCC-CCcEEEeeeccccccCC-C
Q 005040 504 FMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDE-NMVAHVSDFGISKLLGE-G 581 (717)
Q Consensus 504 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfgl~~~~~~-~ 581 (717)
|+++|+|.+++...+..+++..+...+.||++||+||| +++|+||||||+|||++. ++.+||+|||++..... .
T Consensus 97 y~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylH----s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLH----SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred ccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH----hCCEeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 99999999999987657999999999999999999999 789999999999999999 79999999999987753 1
Q ss_pred CCceeeeccccCccccCCCccCCC-CcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccc
Q 005040 582 EDSVIQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANL 660 (717)
Q Consensus 582 ~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (717)
..........||+.|||||++..+ ....++||||+||++.||+||++||... .. ...+.-.... ....
T Consensus 173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~~---~~~~~~~ig~-------~~~~ 241 (313)
T KOG0198|consen 173 TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-FE---EAEALLLIGR-------EDSL 241 (313)
T ss_pred ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-cc---hHHHHHHHhc-------cCCC
Confidence 112223346799999999998864 3345999999999999999999999763 11 1111110000 0000
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 005040 661 VREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLR 703 (717)
Q Consensus 661 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~ 703 (717)
+.. +...+.++.+++.+|+..+|++||||.++++.--
T Consensus 242 ----P~i--p~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf 278 (313)
T KOG0198|consen 242 ----PEI--PDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPF 278 (313)
T ss_pred ----CCC--CcccCHHHHHHHHHHhhcCcccCcCHHHHhhChh
Confidence 011 1134567889999999999999999999998654
No 19
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-43 Score=367.83 Aligned_cols=269 Identities=27% Similarity=0.476 Sum_probs=225.7
Q ss_pred CCCCHHHHHHHhc---------cCCccccccccccEEEEEEEec----CCCeEEEEEechhh-HHHHHHHHHHHHHHHhc
Q 005040 415 RRTSYLDIRRATD---------EFNECNLLGTGGFGSVYKGTLS----DGTNVAIKIFNLQL-ERAFRSFDSECEILRNV 480 (717)
Q Consensus 415 ~~~~~~~~~~~~~---------~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l 480 (717)
..++|+|.-.+.. ...+.++||.|.||.||+|+++ ....||||.++... ++++++|..|..||.+.
T Consensus 608 DP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF 687 (996)
T KOG0196|consen 608 DPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF 687 (996)
T ss_pred CCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC
Confidence 4555665433333 3345688999999999999975 34569999998765 55678899999999999
Q ss_pred CCCceeeEeeeeecCCeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCee
Q 005040 481 RHRNLLKILGSCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNIL 560 (717)
Q Consensus 481 ~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nil 560 (717)
.||||+++-|+......+++|+|||++|+|..||+.+...+.+.+...+.++||.|++||. +.++|||||.++|||
T Consensus 688 dHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLs----dm~YVHRDLAARNIL 763 (996)
T KOG0196|consen 688 DHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLS----DMNYVHRDLAARNIL 763 (996)
T ss_pred CCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHh----hcCchhhhhhhhhee
Confidence 9999999999999999999999999999999999998888999999999999999999999 689999999999999
Q ss_pred eCCCCcEEEeeeccccccCCCCCceeeeccc--cCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCc
Q 005040 561 LDENMVAHVSDFGISKLLGEGEDSVIQTMTM--ATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGE 637 (717)
Q Consensus 561 l~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~--~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~ 637 (717)
++.+..+|++|||+++.+.++.. ...+... -+..|.|||.+....+|.+||||||||+|||.++ |.+||.++.+.+
T Consensus 764 VNsnLvCKVsDFGLSRvledd~~-~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd 842 (996)
T KOG0196|consen 764 VNSNLVCKVSDFGLSRVLEDDPE-AAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD 842 (996)
T ss_pred eccceEEEeccccceeecccCCC-ccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH
Confidence 99999999999999998754432 1122222 2688999999999999999999999999999888 999998754321
Q ss_pred chHHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHH
Q 005040 638 MSLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKA 707 (717)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~ 707 (717)
. ...++ +....+.+++|+..+.+|+..||++|-.+||.+.|++..|.++.+
T Consensus 843 V--------------IkaIe-----~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 843 V--------------IKAIE-----QGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred H--------------HHHHH-----hccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence 1 11111 122457788999999999999999999999999999999999855
No 20
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-42 Score=351.31 Aligned_cols=248 Identities=23% Similarity=0.341 Sum_probs=211.2
Q ss_pred ccCCccccccccccEEEEEEEe-cCCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEcc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTL-SDGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFM 505 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 505 (717)
..|+...+||+|+.|.||.|.. .+++.||||++........+-+..|+.+|+..+|+|||.+++.|...+...+|||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 5777888999999999999984 478999999998887666778899999999999999999999998889999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCce
Q 005040 506 PNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSV 585 (717)
Q Consensus 506 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 585 (717)
+||+|.+.+.... +++.++..|+..+++||+||| .++|+|||||.+|||++.+|.+||+|||++..+.....
T Consensus 353 ~ggsLTDvVt~~~--~~E~qIA~Icre~l~aL~fLH----~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~-- 424 (550)
T KOG0578|consen 353 EGGSLTDVVTKTR--MTEGQIAAICREILQGLKFLH----ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS-- 424 (550)
T ss_pred CCCchhhhhhccc--ccHHHHHHHHHHHHHHHHHHH----hcceeeeccccceeEeccCCcEEEeeeeeeeccccccC--
Confidence 9999999998755 899999999999999999999 78999999999999999999999999999988765432
Q ss_pred eeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHH-H-HHhhCCCchhhhccccchhh
Q 005040 586 IQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRR-W-VKESLPHRLTEVVDANLVRE 663 (717)
Q Consensus 586 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~ 663 (717)
.....+||+.|||||+.....|++|.||||||+|++||+.|.+||-.. ..+.. | +....+ +
T Consensus 425 KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE----~PlrAlyLIa~ng~--------P----- 487 (550)
T KOG0578|consen 425 KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNE----NPLRALYLIATNGT--------P----- 487 (550)
T ss_pred ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCC----ChHHHHHHHhhcCC--------C-----
Confidence 345668999999999999999999999999999999999999998531 11111 1 111111 1
Q ss_pred hhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 664 EQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 664 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
........+..+.+|+.+||..||++|++++|+++.
T Consensus 488 --~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 488 --KLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred --CcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 112233456778999999999999999999999863
No 21
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-41 Score=318.90 Aligned_cols=237 Identities=27% Similarity=0.359 Sum_probs=200.7
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
++|+..+.||.|+||+|.+++.+ +|..+|+|++.+.. -.+.+....|..+|+.+.||.++++++.+.+....||||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 68899999999999999999976 78899999998765 344567788999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
||++||.|..++++.++ +++..++-++.+|+.|++||| +.+|++||+||+|||+|.+|++||+|||+|+.+...
T Consensus 124 eyv~GGElFS~Lrk~~r-F~e~~arFYAAeivlAleylH----~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r- 197 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSGR-FSEPHARFYAAEIVLALEYLH----SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR- 197 (355)
T ss_pred eccCCccHHHHHHhcCC-CCchhHHHHHHHHHHHHHHHH----hcCeeeccCChHHeeeccCCcEEEEeccceEEecCc-
Confidence 99999999999998765 899999999999999999999 788999999999999999999999999999987432
Q ss_pred CceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchh
Q 005040 583 DSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVR 662 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (717)
....||||.|+|||.+..+.|..++|+|||||++|||+.|.+||.+..+ + ..+- .++...+.
T Consensus 198 ----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~--~--~iY~---------KI~~~~v~- 259 (355)
T KOG0616|consen 198 ----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP--I--QIYE---------KILEGKVK- 259 (355)
T ss_pred ----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh--H--HHHH---------HHHhCccc-
Confidence 3456899999999999999999999999999999999999999976332 1 1111 11111111
Q ss_pred hhhhhhhhHHHHHHHHHHHhhccCCCCCCCC
Q 005040 663 EEQAFSDKMDCLFSIMDLALDCCMDTPHKRI 693 (717)
Q Consensus 663 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp 693 (717)
+ +.-++.++.+|+...+++|-.+|.
T Consensus 260 ----f--P~~fs~~~kdLl~~LL~vD~t~R~ 284 (355)
T KOG0616|consen 260 ----F--PSYFSSDAKDLLKKLLQVDLTKRF 284 (355)
T ss_pred ----C--CcccCHHHHHHHHHHHhhhhHhhh
Confidence 1 113345678999999999998883
No 22
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-41 Score=332.44 Aligned_cols=260 Identities=25% Similarity=0.314 Sum_probs=213.2
Q ss_pred ccCCccccccccccEEEEEEEe-cCCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTL-SDGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
++|+....||.|..++||+|.. +.+..||||++..+. ....+.+.+|+..|+.++||||++++..|..+..+++||.|
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpf 105 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPF 105 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehh
Confidence 6889999999999999999985 478999999998665 33468899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 505 MPNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 505 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
|.+|++.+.++.. ...+++..+..|.+++++||.||| .+|.+|||||+.|||++.+|.|||+|||.+..+.....
T Consensus 106 Ma~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH----~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~ 181 (516)
T KOG0582|consen 106 MAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLH----QNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD 181 (516)
T ss_pred hcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHH----hcCceecccccccEEEcCCCcEEEcCceeeeeecccCc
Confidence 9999999999853 344899999999999999999999 68999999999999999999999999999876654332
Q ss_pred -ceee-eccccCccccCCCccCC--CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhcccc
Q 005040 584 -SVIQ-TMTMATIGYMAPEYGSE--GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDAN 659 (717)
Q Consensus 584 -~~~~-~~~~~t~~y~aPE~~~~--~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (717)
.... ....||+.|||||++.. ..|+.|+||||||++..||.+|..||....+-++.+...-.. .|.-.....+
T Consensus 182 R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~-pp~~~t~~~~-- 258 (516)
T KOG0582|consen 182 RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQND-PPTLLTSGLD-- 258 (516)
T ss_pred eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCC-CCCcccccCC--
Confidence 1222 45689999999998543 469999999999999999999999998876555444433221 1111111111
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 660 LVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 660 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
......+...+.+++..|+..||++|||++++++
T Consensus 259 -------~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 259 -------KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred -------hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 1223345567999999999999999999999875
No 23
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.2e-41 Score=342.93 Aligned_cols=254 Identities=24% Similarity=0.340 Sum_probs=206.4
Q ss_pred HHhccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeE
Q 005040 424 RATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKA 499 (717)
Q Consensus 424 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~ 499 (717)
...++|+.++.||+|+||.||+|+-+ +|..+|+|++++.. ....+.+++|-.+|....+|+||+++..|++.+++|
T Consensus 138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY 217 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY 217 (550)
T ss_pred CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE
Confidence 35689999999999999999999865 79999999998775 556678899999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccC
Q 005040 500 LVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLG 579 (717)
Q Consensus 500 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 579 (717)
|||||++|||+..+|...+. +++..+...+.+++-|+..+| ..||+||||||+|+|||..|++||+|||++.-+.
T Consensus 218 LiMEylPGGD~mTLL~~~~~-L~e~~arfYiaE~vlAI~~iH----~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 218 LIMEYLPGGDMMTLLMRKDT-LTEDWARFYIAETVLAIESIH----QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD 292 (550)
T ss_pred EEEEecCCccHHHHHHhcCc-CchHHHHHHHHHHHHHHHHHH----HcCcccccCChhheeecCCCCEeeccccccchhh
Confidence 99999999999999987654 888899999999999999999 6899999999999999999999999999985331
Q ss_pred CC----------------------CCc----e-------------------eeeccccCccccCCCccCCCCcCcccchh
Q 005040 580 EG----------------------EDS----V-------------------IQTMTMATIGYMAPEYGSEGIVSTKCDVY 614 (717)
Q Consensus 580 ~~----------------------~~~----~-------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Dvw 614 (717)
.. +.. . .....+|||.|||||++.+..|+..+|+|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW 372 (550)
T KOG0605|consen 293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW 372 (550)
T ss_pred hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence 10 000 0 01124799999999999999999999999
Q ss_pred hHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCC
Q 005040 615 SYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIH 694 (717)
Q Consensus 615 s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt 694 (717)
|+|||+|||+.|.+||....+ ...|.+-. . .+..-.++....++.++.+||.+|+. ||+.|..
T Consensus 373 SLG~ImyEmLvGyPPF~s~tp----~~T~rkI~---------n---wr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 373 SLGCIMYEMLVGYPPFCSETP----QETYRKIV---------N---WRETLKFPEEVDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred HHHHHHHHHHhCCCCCCCCCH----HHHHHHHH---------H---HhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcC
Confidence 999999999999999976432 22222211 0 00001123333455778999999999 9999996
Q ss_pred ---HHHHH
Q 005040 695 ---MTDAA 699 (717)
Q Consensus 695 ---~~ev~ 699 (717)
++||.
T Consensus 436 ~~G~~EIK 443 (550)
T KOG0605|consen 436 SKGAEEIK 443 (550)
T ss_pred cccHHHHh
Confidence 44443
No 24
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=5e-41 Score=354.05 Aligned_cols=261 Identities=26% Similarity=0.425 Sum_probs=205.4
Q ss_pred HhccCCccccccccccEEEEEEEe------cCCCeEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecC-
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTL------SDGTNVAIKIFNLQL-ERAFRSFDSECEILRNV-RHRNLLKILGSCSNL- 495 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~- 495 (717)
..++|++.+.||+|+||.||+|.+ .+++.||||++.... ....+.+.+|+++++.+ +||||+++++++...
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 346899999999999999999974 245679999987543 23346788999999999 899999999988654
Q ss_pred CeeEEEEEccCCCCHHHHHhhCC---------------------------------------------------------
Q 005040 496 DFKALVLEFMPNGSLEKWLYSHN--------------------------------------------------------- 518 (717)
Q Consensus 496 ~~~~lv~e~~~~g~L~~~l~~~~--------------------------------------------------------- 518 (717)
...++||||+++|+|.+++....
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 45789999999999999997531
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceeeeccccCc
Q 005040 519 ----YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQTMTMATI 594 (717)
Q Consensus 519 ----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~ 594 (717)
..+++..+..++.|+++||.||| +.+|+||||||+||+++.++.+||+|||+++...............++.
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH----~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~ 240 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLA----SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPL 240 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHH----HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCc
Confidence 23678888999999999999999 6899999999999999999999999999998664332222223334678
Q ss_pred cccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhhhHHH
Q 005040 595 GYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDC 673 (717)
Q Consensus 595 ~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (717)
.|+|||++.+..++.++|||||||++|||++ |..||......+ ........... . ..+..+
T Consensus 241 ~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-~~~~~~~~~~~--------~---------~~~~~~ 302 (338)
T cd05102 241 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-EFCQRLKDGTR--------M---------RAPENA 302 (338)
T ss_pred cccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-HHHHHHhcCCC--------C---------CCCCCC
Confidence 8999999999999999999999999999997 999987532211 11111110000 0 001133
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHH
Q 005040 674 LFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKA 707 (717)
Q Consensus 674 ~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~ 707 (717)
+.++.+++.+||+.||++|||+.|+++.|+++..
T Consensus 303 ~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 303 TPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 4568899999999999999999999999998765
No 25
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-41 Score=377.23 Aligned_cols=264 Identities=28% Similarity=0.455 Sum_probs=221.2
Q ss_pred ccCCccccccccccEEEEEEEec--CCC----eEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS--DGT----NVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKA 499 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~--~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~ 499 (717)
...+..+.||+|+||.||.|... +|. .||+|.++... .+...+|.+|..+|++++|||||+++|++-+....+
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~ 771 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL 771 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence 44556678999999999999864 343 38999887654 556688999999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHhhC------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeec
Q 005040 500 LVLEFMPNGSLEKWLYSH------NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFG 573 (717)
Q Consensus 500 lv~e~~~~g~L~~~l~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 573 (717)
+++|||++|||..||++. ...+.......++.|||+|+.||+ ++++|||||.++|+|++....|||+|||
T Consensus 772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe----~~~fvHRDLAaRNCLL~~~r~VKIaDFG 847 (1025)
T KOG1095|consen 772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE----SKHFVHRDLAARNCLLDERRVVKIADFG 847 (1025)
T ss_pred EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH----hCCCcCcchhhhheeecccCcEEEcccc
Confidence 999999999999999977 677899999999999999999999 6789999999999999999999999999
Q ss_pred cccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCch
Q 005040 574 ISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRL 652 (717)
Q Consensus 574 l~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 652 (717)
+|+++-..+.........-+..|||||.+..+.++.|+|||||||++||++| |..||.+...-+
T Consensus 848 lArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~--------------- 912 (1025)
T KOG1095|consen 848 LARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE--------------- 912 (1025)
T ss_pred hhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH---------------
Confidence 9996655444443333345788999999999999999999999999999999 889997643211
Q ss_pred hhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHhhccch
Q 005040 653 TEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKAKFLDDV 713 (717)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~~~~~~~ 713 (717)
++..-+.+ ...+.+..|+..+.++|..||+.+|++||++..+++.+.++.+...+++
T Consensus 913 --v~~~~~~g--gRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~~~ 969 (1025)
T KOG1095|consen 913 --VLLDVLEG--GRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALGTI 969 (1025)
T ss_pred --HHHHHHhC--CccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhccCc
Confidence 11111111 1345566889999999999999999999999999999999987766543
No 26
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-41 Score=348.05 Aligned_cols=249 Identities=27% Similarity=0.346 Sum_probs=205.2
Q ss_pred HHhccCCccccccccccEEEEEEEec-CCCeEEEEEechhh----H-HHHHHHHHHHHHHHhcC-CCceeeEeeeeecCC
Q 005040 424 RATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL----E-RAFRSFDSECEILRNVR-HRNLLKILGSCSNLD 496 (717)
Q Consensus 424 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----~-~~~~~~~~e~~~l~~l~-hpniv~~~~~~~~~~ 496 (717)
...++|...+.||+|.||.|+.|.+. +++.||+|++.... . ...+.+.+|+.+++.++ ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 34578999999999999999999864 78999999876541 2 23456678999999998 999999999999999
Q ss_pred eeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCC-CcEEEeeeccc
Q 005040 497 FKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDEN-MVAHVSDFGIS 575 (717)
Q Consensus 497 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfgl~ 575 (717)
..|+||||+.||+|.+++.+ ...+.+..+..++.|++.|++|+| +++|+||||||+|||++.+ +++||+|||++
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H----~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCH----SRGIVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred eEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHH----hCCEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 99999999999999999999 556889999999999999999999 7899999999999999999 99999999999
Q ss_pred cccCCCCCceeeeccccCccccCCCccCCCC-cC-cccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchh
Q 005040 576 KLLGEGEDSVIQTMTMATIGYMAPEYGSEGI-VS-TKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLT 653 (717)
Q Consensus 576 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~-~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 653 (717)
..... ........+||+.|+|||++.+.. |+ .++||||+||+||-|++|+.||++... ......
T Consensus 169 ~~~~~--~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~-----~~l~~k------- 234 (370)
T KOG0583|consen 169 AISPG--EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNV-----PNLYRK------- 234 (370)
T ss_pred cccCC--CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccH-----HHHHHH-------
Confidence 98731 112235668999999999999877 75 889999999999999999999987211 111110
Q ss_pred hhccccchhhhhhhhhhHHH-HHHHHHHHhhccCCCCCCCCCHHHHH
Q 005040 654 EVVDANLVREEQAFSDKMDC-LFSIMDLALDCCMDTPHKRIHMTDAA 699 (717)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~-~~~l~~li~~cl~~~P~~Rpt~~ev~ 699 (717)
+......++. .+ +.++..++.+|+..+|.+|+|+.+++
T Consensus 235 ------i~~~~~~~p~--~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 235 ------IRKGEFKIPS--YLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred ------HhcCCccCCC--CcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 0000001111 22 56688999999999999999999998
No 27
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-41 Score=351.78 Aligned_cols=259 Identities=29% Similarity=0.437 Sum_probs=213.4
Q ss_pred cCCccccccccccEEEEEEEec--CC--Ce-EEEEEechh---hHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeE
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS--DG--TN-VAIKIFNLQ---LERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKA 499 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~--~~--~~-vavK~~~~~---~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~ 499 (717)
+-...++||+|+||.||+|.++ ++ .. ||||..+.. .......+.+|.++|++++|||||+++|++.....++
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ 237 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLM 237 (474)
T ss_pred CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccE
Confidence 3444589999999999999875 23 23 899998852 2667788999999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccC
Q 005040 500 LVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLG 579 (717)
Q Consensus 500 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 579 (717)
+|||+|.||+|.++|+..+..++..++..++.+.|.||+||| +++++||||.++|+|++.++.+||+|||+++.-.
T Consensus 238 ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh----~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~ 313 (474)
T KOG0194|consen 238 LVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLH----SKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGS 313 (474)
T ss_pred EEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHH----HCCCcchhHhHHHheecCCCeEEeCccccccCCc
Confidence 999999999999999988777999999999999999999999 7899999999999999999999999999987532
Q ss_pred CCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHH-HhhCCCchhhhcc
Q 005040 580 EGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWV-KESLPHRLTEVVD 657 (717)
Q Consensus 580 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 657 (717)
..........-+..|+|||.+..+.|+.++|||||||++||+++ |..||.+.... ....++ ...++-
T Consensus 314 --~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~--~v~~kI~~~~~r~------- 382 (474)
T KOG0194|consen 314 --QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY--EVKAKIVKNGYRM------- 382 (474)
T ss_pred --ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH--HHHHHHHhcCccC-------
Confidence 11111112345788999999999999999999999999999999 88899874322 333333 211111
Q ss_pred ccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHhhcc
Q 005040 658 ANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKAKFLD 711 (717)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~~~~~ 711 (717)
+.+...+.++..++.+||..+|++||+|.++.+.++.+......
T Consensus 383 ----------~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 383 ----------PIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred ----------CCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 11113456788999999999999999999999999999877654
No 28
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-40 Score=330.21 Aligned_cols=279 Identities=25% Similarity=0.337 Sum_probs=212.3
Q ss_pred ccCCccccccccccEEEEEEEecCCCeEEEEEechhhHHHHHHHHHHHHHHHhc--CCCceeeEeeeeecCC----eeEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLERAFRSFDSECEILRNV--RHRNLLKILGSCSNLD----FKAL 500 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~hpniv~~~~~~~~~~----~~~l 500 (717)
...+..+.||+|.||.||+|++. ++.||||++... ..+.|..|-++++.. +|+||++++++-.... .+.+
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL 285 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL 285 (534)
T ss_pred CchhhHHHhhcCccceeehhhcc-CceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence 34556678999999999999994 699999999855 346788888888865 8999999999865444 7789
Q ss_pred EEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcC-----CCCCeEecCCCCCCeeeCCCCcEEEeeeccc
Q 005040 501 VLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCH-----SSAPIIHCDLKPTNILLDENMVAHVSDFGIS 575 (717)
Q Consensus 501 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~-----~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 575 (717)
|+||.+.|+|.+|+..+. ++|....+|+..+++||+|||+.. ..++|+|||||++|||+..|++..|+|||+|
T Consensus 286 Vt~fh~kGsL~dyL~~nt--isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA 363 (534)
T KOG3653|consen 286 VTEFHPKGSLCDYLKANT--ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA 363 (534)
T ss_pred EeeeccCCcHHHHHHhcc--ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence 999999999999999876 899999999999999999999753 3567999999999999999999999999999
Q ss_pred cccCCCCCceeeeccccCccccCCCccCCCCc------CcccchhhHHHHHHHHHhCCCCCCc--cccCcchHHHHHHhh
Q 005040 576 KLLGEGEDSVIQTMTMATIGYMAPEYGSEGIV------STKCDVYSYGVLLMETFTEKKPTDE--MFTGEMSLRRWVKES 647 (717)
Q Consensus 576 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~------~~~~Dvws~G~il~el~tg~~p~~~--~~~~~~~~~~~~~~~ 647 (717)
..+............+||.+|||||++.+... =.+.||||+|.++|||+++..-+.. ..+-+..+..-+..+
T Consensus 364 l~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~h 443 (534)
T KOG3653|consen 364 LRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNH 443 (534)
T ss_pred EEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCC
Confidence 98876555444556789999999998876532 1369999999999999997765431 111122222222221
Q ss_pred CCC-chh-hhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHhhcc
Q 005040 648 LPH-RLT-EVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKAKFLD 711 (717)
Q Consensus 648 ~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~~~~~ 711 (717)
..- ++. -++.++.+...+..+..-.....+.+.+..||..||+.|.|+.=|-+++.++....++
T Consensus 444 Pt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~ 509 (534)
T KOG3653|consen 444 PTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWED 509 (534)
T ss_pred CCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence 111 111 1222222222222233334456789999999999999999999999999998766554
No 29
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=3.2e-41 Score=341.08 Aligned_cols=246 Identities=29% Similarity=0.425 Sum_probs=209.0
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLE 503 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 503 (717)
++|.+.+.||+|.||.||||+.+ +.+.||+|.+.+.. ++..+.+.+|+++++.++|||||.++++|+...++++|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 46778889999999999999976 78899999997664 4456778999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 504 FMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 504 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
|+.| +|..++...+. ++++.+..++.+++.||.||| +.+|.|||+||.|||++.+|.+|+||||+++.+...
T Consensus 82 ~a~g-~L~~il~~d~~-lpEe~v~~~a~~LVsaL~yLh----s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~-- 153 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDGK-LPEEQVRAIAYDLVSALYYLH----SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN-- 153 (808)
T ss_pred hhhh-hHHHHHHhccC-CCHHHHHHHHHHHHHHHHHHH----hcCcccccCCcceeeecCCCceeechhhhhhhcccC--
Confidence 9976 99999997765 999999999999999999999 789999999999999999999999999999987653
Q ss_pred ceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhh
Q 005040 584 SVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVRE 663 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (717)
....+...|||-|||||...++.|+..+|.||+||++||+++|++||-.. .+.+.++....+..
T Consensus 154 t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~-----si~~Lv~~I~~d~v----------- 217 (808)
T KOG0597|consen 154 TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR-----SITQLVKSILKDPV----------- 217 (808)
T ss_pred ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH-----HHHHHHHHHhcCCC-----------
Confidence 33445667999999999999999999999999999999999999998541 12222222111110
Q ss_pred hhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 664 EQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 664 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
..+...+..+..++...+..||..|.|..+++.
T Consensus 218 ----~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 218 ----KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred ----CCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 111245567889999999999999999999865
No 30
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.3e-40 Score=317.16 Aligned_cols=266 Identities=24% Similarity=0.307 Sum_probs=205.7
Q ss_pred HhccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHH--HHHHHHHHHHHHhcCCCceeeEeeeeec--CCeeE
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERA--FRSFDSECEILRNVRHRNLLKILGSCSN--LDFKA 499 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~hpniv~~~~~~~~--~~~~~ 499 (717)
..++|+.++.|++|.||.||+|+++ +++.||+|+++...... --...+|+.+|.+.+|||||.+-.+... -+..|
T Consensus 74 sv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred cHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceee
Confidence 3468999999999999999999975 78999999998765321 1235789999999999999999988754 45789
Q ss_pred EEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccC
Q 005040 500 LVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLG 579 (717)
Q Consensus 500 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 579 (717)
||||||+. ||...+..-+..+...++..++.|+++|++||| ...|+|||||++|+|+...|.+||+|||+|+.++
T Consensus 154 ~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH----~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 154 IVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLH----DNWILHRDLKTSNLLLSHKGILKIADFGLAREYG 228 (419)
T ss_pred eeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHh----hceeEecccchhheeeccCCcEEecccchhhhhc
Confidence 99999987 999999987777999999999999999999999 6789999999999999999999999999999987
Q ss_pred CCCCceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcc-hHHHHHHhh-CCCc--hhh
Q 005040 580 EGEDSVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEM-SLRRWVKES-LPHR--LTE 654 (717)
Q Consensus 580 ~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~-~~~~~~~~~-~~~~--~~~ 654 (717)
.+. ...+..+.|.+|+|||.+.+ ..|+...|+||+|||+.||+++++-|.+. ++. ++.+..... .|.+ +..
T Consensus 229 sp~--k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~--sE~dQl~~If~llGtPte~iwpg 304 (419)
T KOG0663|consen 229 SPL--KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGK--SEIDQLDKIFKLLGTPSEAIWPG 304 (419)
T ss_pred CCc--ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCC--chHHHHHHHHHHhCCCccccCCC
Confidence 653 23455678999999997655 66999999999999999999999988663 222 222222211 1111 111
Q ss_pred hccccch------h-----hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 655 VVDANLV------R-----EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 655 ~~~~~~~------~-----~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
+...... . -...+.. ...+..-.+++..++..||++|.||+|.++
T Consensus 305 ~~~lp~~k~~~f~~~pyn~lr~kF~~-~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 305 YSELPAVKKMTFSEHPYNNLRKKFGA-LSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred ccccchhhccccCCCCchhhhhhccc-cccchhHHHHHHHHhccCccccccHHHhhc
Confidence 1110000 0 0001111 113466789999999999999999999875
No 31
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-41 Score=339.29 Aligned_cols=241 Identities=27% Similarity=0.408 Sum_probs=201.7
Q ss_pred ccccccccccEEEEEEEecCCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCCCCH
Q 005040 431 ECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPNGSL 510 (717)
Q Consensus 431 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L 510 (717)
..+-||.|+.|.||+|+.. ++.||||+++.-. ..+++-|++|+||||+.|.|+|....-+|+|||||..|-|
T Consensus 128 ELeWlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL 199 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQL 199 (904)
T ss_pred hhhhhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccH
Confidence 4568999999999999994 7889999765332 2378889999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceeeecc
Q 005040 511 EKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQTMT 590 (717)
Q Consensus 511 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~ 590 (717)
..+++.... +.......|.++||.|+.||| .+.|+|||||.-|||++.+..|||+|||-++...... ..-.+
T Consensus 200 ~~VLka~~~-itp~llv~Wsk~IA~GM~YLH----~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~S---TkMSF 271 (904)
T KOG4721|consen 200 YEVLKAGRP-ITPSLLVDWSKGIAGGMNYLH----LHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKS---TKMSF 271 (904)
T ss_pred HHHHhccCc-cCHHHHHHHHHHhhhhhHHHH----HhhHhhhccCCCceEeeccceEEeccccchHhhhhhh---hhhhh
Confidence 999997654 777788899999999999999 6889999999999999999999999999998765431 23456
Q ss_pred ccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhhh
Q 005040 591 MATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSDK 670 (717)
Q Consensus 591 ~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (717)
+||..|||||++.....++|+|||||||+||||+||..||.+..... +..-+.. ..-..+.+
T Consensus 272 aGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA--------------IIwGVGs----NsL~LpvP 333 (904)
T KOG4721|consen 272 AGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA--------------IIWGVGS----NSLHLPVP 333 (904)
T ss_pred hhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe--------------eEEeccC----CcccccCc
Confidence 79999999999999999999999999999999999999997632110 0000111 11123455
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 005040 671 MDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKI 705 (717)
Q Consensus 671 ~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~ 705 (717)
..|+..+.-|++.||+..|..||++.+++..|.-.
T Consensus 334 stcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 334 STCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred ccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 68889999999999999999999999999988743
No 32
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=334.13 Aligned_cols=248 Identities=23% Similarity=0.320 Sum_probs=200.3
Q ss_pred cccccccccEEEEEEEecCCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeec----CCeeEEEEEc
Q 005040 432 CNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSN----LDFKALVLEF 504 (717)
Q Consensus 432 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~----~~~~~lv~e~ 504 (717)
...||+|++|.||+|.+ +|+.||||++.... ....+.+.+|++++++++||||++++|++.+ ....++||||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 36799999999999998 68999999987543 2235678899999999999999999999866 4567999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
+++|+|.+++.+.. .+++.....++.|++.|+.|||. ..+++||||||+||+++.++.+||+|||++.......
T Consensus 104 ~~~g~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lH~---~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~-- 177 (283)
T PHA02988 104 CTRGYLREVLDKEK-DLSFKTKLDMAIDCCKGLYNLYK---YTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP-- 177 (283)
T ss_pred CCCCcHHHHHhhCC-CCChhHHHHHHHHHHHHHHHHHh---cCCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc--
Confidence 99999999998754 48899999999999999999994 2478899999999999999999999999988654321
Q ss_pred eeeeccccCccccCCCccCC--CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchh
Q 005040 585 VIQTMTMATIGYMAPEYGSE--GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVR 662 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~--~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (717)
....++..|+|||++.+ ..++.++|||||||++|||++|+.||...... .....+... . .
T Consensus 178 ---~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~--~~~~~i~~~---~------~---- 239 (283)
T PHA02988 178 ---FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK--EIYDLIINK---N------N---- 239 (283)
T ss_pred ---ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHhc---C------C----
Confidence 23457889999999876 67999999999999999999999999763211 111111000 0 0
Q ss_pred hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHH
Q 005040 663 EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKA 707 (717)
Q Consensus 663 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~ 707 (717)
....+..++.++.+++.+||+.||++|||++|+++.|+++..
T Consensus 240 ---~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 240 ---SLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred ---CCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 001112356678999999999999999999999999998743
No 33
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.7e-39 Score=337.18 Aligned_cols=263 Identities=27% Similarity=0.411 Sum_probs=204.0
Q ss_pred hccCCccccccccccEEEEEEEecC-----------------CCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceee
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLSD-----------------GTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLK 487 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~ 487 (717)
.++|++.+.||+|+||.||+|.+++ +..||+|++.... ......+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 3578889999999999999997532 3369999987543 334567889999999999999999
Q ss_pred EeeeeecCCeeEEEEEccCCCCHHHHHhhCC------------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 005040 488 ILGSCSNLDFKALVLEFMPNGSLEKWLYSHN------------------YFLDILQRLNIMIDVGSALEYLHHCHSSAPI 549 (717)
Q Consensus 488 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i 549 (717)
+++++.+.+..++||||+++|+|.+++.... ..+++..+..++.|++.||.||| +.+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH----~~~i 159 (304)
T cd05096 84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS----SLNF 159 (304)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH----HCCc
Confidence 9999999999999999999999999986431 23678889999999999999999 6789
Q ss_pred EecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh--CC
Q 005040 550 IHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT--EK 627 (717)
Q Consensus 550 vH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t--g~ 627 (717)
+||||||+||+++.++.+||+|||++................++..|+|||+..++.++.++||||||+++|||++ +.
T Consensus 160 vH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~ 239 (304)
T cd05096 160 VHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKE 239 (304)
T ss_pred cccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCC
Confidence 9999999999999999999999999987644332222333456788999999888889999999999999999987 55
Q ss_pred CCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 005040 628 KPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRK 704 (717)
Q Consensus 628 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~ 704 (717)
.||..... ......+............ ...+..++..+.+++.+||+.||++|||+.|+.+.|++
T Consensus 240 ~p~~~~~~--~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 240 QPYGELTD--EQVIENAGEFFRDQGRQVY----------LFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCCcCCH--HHHHHHHHHHhhhcccccc----------ccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 67765321 1122222211111000000 00112345678999999999999999999999998863
No 34
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.4e-39 Score=389.66 Aligned_cols=337 Identities=36% Similarity=0.549 Sum_probs=278.4
Q ss_pred CCCCccccCCCCCcEEECCCCcceecCCcCCCCCCCCCEEEcccccccCccCCcccccccccccCccCCcEEeccCCCCc
Q 005040 2 GTIPNSITNATKLIGLDLGLNSFSGHIPNTFGNLRHLSVLSLMMNNLTTESSSADQWSFLSSLTNCRNLANLALASNPLG 81 (717)
Q Consensus 2 ~~iP~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~ 81 (717)
+.+|..|.++++|++|+|++|++++..|..|+++++|++|+|++|++++..+ ..+.++++|++|+|++|.+.
T Consensus 226 ~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p--------~~l~~l~~L~~L~Ls~n~l~ 297 (968)
T PLN00113 226 GEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIP--------PSIFSLQKLISLDLSDNSLS 297 (968)
T ss_pred CcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCc--------hhHhhccCcCEEECcCCeec
Confidence 4789999999999999999999999999999999999999999999986543 34889999999999999999
Q ss_pred ccCCcchhccccccceeeecCCcceecCCccccCCCCCcEEEccCCCCcccCCccccccCCCCEEeccCCcccccCCccc
Q 005040 82 GILPPLIGNFSASLQNIYAFECKLGGSIPKEIGNLRGLIVLSLGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPHDL 161 (717)
Q Consensus 82 ~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~ 161 (717)
+..|..+..+ ++|+.|++++|.+.+..|..+.++++|++|+|++|.+.+.+|..+..+++|+.|++++|++.+..|..+
T Consensus 298 ~~~p~~~~~l-~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~ 376 (968)
T PLN00113 298 GEIPELVIQL-QNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGL 376 (968)
T ss_pred cCCChhHcCC-CCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhH
Confidence 9999999888 679999999999999999999999999999999999998889999999999999999999887777777
Q ss_pred cCCCCCCEEeccCCcCcccCCccccCCCCCCeEEecCccccCCCChhhhcccCCCeEEccCCcCcccCCccccC------
Q 005040 162 CHLERLNILNLSGNKLSGAIPQCLASLTSLRSLYLQSNKLSSSLPSSLWSLEYILRINLSSNSLKGTLPSNIQK------ 235 (717)
Q Consensus 162 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~------ 235 (717)
+.+++|+.|++++|.+.+..|..+..+++|+.|+|++|++++..|..|..+++|+.|++++|.+++.++..+..
T Consensus 377 ~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 456 (968)
T PLN00113 377 CSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQM 456 (968)
T ss_pred hCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcE
Confidence 77777777777777766666666666666666666666666656666666666655555555555544443333
Q ss_pred -----------------CCCCCeEEccCCCCCCCCcccccCCcccccccccCccccCCCCccccccCccceEeccCCCCC
Q 005040 236 -----------------LNVLIDLDLSRNQLSSDIPSTIGTLKNLETLSLAGNQFQGPIPESVGNLISLESLDFSNNNLS 298 (717)
Q Consensus 236 -----------------l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 298 (717)
.++|+.|++++|.+++..|..+..+++|+.|+|++|++.+.+|..+.++++|++|+|++|.++
T Consensus 457 L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 536 (968)
T PLN00113 457 LSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLS 536 (968)
T ss_pred EECcCceeeeecCcccccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCccc
Confidence 355667777777777777888888899999999999999899999999999999999999999
Q ss_pred CCCcccccccccccEEEccCCccccccccc-ccccccccccccCCccccC
Q 005040 299 GKIPKSLEALSHLKQFNVSHNRLEGEIPVK-GSFKDFSAQSYFGNYALCG 347 (717)
Q Consensus 299 ~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~~c~ 347 (717)
+.+|..+..+++|+.|+|++|++++.+|.. ..+..+..+.+.+|+..+.
T Consensus 537 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~ 586 (968)
T PLN00113 537 GQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGS 586 (968)
T ss_pred ccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceee
Confidence 999999999999999999999999988863 4455666777777776543
No 35
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-40 Score=345.79 Aligned_cols=244 Identities=24% Similarity=0.280 Sum_probs=205.2
Q ss_pred HHhccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCCee
Q 005040 424 RATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNV-RHRNLLKILGSCSNLDFK 498 (717)
Q Consensus 424 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~ 498 (717)
...++|...++||+|.||.|++|..+ +++.+|||++++.. ++..+..+.|.+++... +||.++.++.+|+..+++
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence 34578999999999999999999987 78899999998775 55667888899999988 599999999999999999
Q ss_pred EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeecccccc
Q 005040 499 ALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLL 578 (717)
Q Consensus 499 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 578 (717)
|+||||+.|||+..+ .+...+++..+.-++..|+.||.||| +++|+|||||.+|||+|.+|++||+|||+++.-
T Consensus 445 ~fvmey~~Ggdm~~~--~~~~~F~e~rarfyaAev~l~L~fLH----~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~ 518 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHH--IHTDVFSEPRARFYAAEVVLGLQFLH----ENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEG 518 (694)
T ss_pred EEEEEecCCCcEEEE--EecccccHHHHHHHHHHHHHHHHHHH----hcCceeeecchhheEEcccCcEEeccccccccc
Confidence 999999999995433 33345999999999999999999999 789999999999999999999999999999865
Q ss_pred CCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccc
Q 005040 579 GEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDA 658 (717)
Q Consensus 579 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (717)
.... ...+..+|||.|||||++.+..|+..+|+|||||+||||+.|..||.+..+. +++|.
T Consensus 519 m~~g--~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe-----------------e~Fds 579 (694)
T KOG0694|consen 519 MGQG--DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE-----------------EVFDS 579 (694)
T ss_pred CCCC--CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH-----------------HHHHH
Confidence 3222 2346779999999999999999999999999999999999999999863221 22222
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCH
Q 005040 659 NLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHM 695 (717)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~ 695 (717)
-+..+ ...+..++.+..+++++++..+|++|..+
T Consensus 580 I~~d~---~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 580 IVNDE---VRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HhcCC---CCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 22111 12233567789999999999999999976
No 36
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.5e-40 Score=301.67 Aligned_cols=248 Identities=26% Similarity=0.317 Sum_probs=209.4
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALV 501 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv 501 (717)
.++|++.+.||+|.||.||.|+.+ ++-.||+|++.+.. .+..+++.+|+++-+.|+||||+++|++|.+....|++
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 478999999999999999999965 78889999997664 34456789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCC
Q 005040 502 LEFMPNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGE 580 (717)
Q Consensus 502 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 580 (717)
+||..+|.+...++.. ...+++...+.++.|+|.|+.|+| .++|+||||||+|+|++.++..||+|||-+..-.
T Consensus 101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h----~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p- 175 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCH----LKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP- 175 (281)
T ss_pred EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhc----cCCcccCCCCHHHhccCCCCCeeccCCCceeecC-
Confidence 9999999999999944 345888999999999999999999 7889999999999999999999999999987543
Q ss_pred CCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccc
Q 005040 581 GEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANL 660 (717)
Q Consensus 581 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (717)
.......+||..|.|||+..+..++.+.|+|++|++.||++.|.+||.... .+..+.+..+.. ..++
T Consensus 176 ---~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-~~etYkrI~k~~-------~~~p-- 242 (281)
T KOG0580|consen 176 ---SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-HSETYKRIRKVD-------LKFP-- 242 (281)
T ss_pred ---CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-hHHHHHHHHHcc-------ccCC--
Confidence 223355689999999999999999999999999999999999999998743 222222222211 1111
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 661 VREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 661 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
...+.++.++|.+|+..+|.+|.+-.|+++.
T Consensus 243 ----------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 243 ----------STISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred ----------cccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 2344567899999999999999999998763
No 37
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-41 Score=331.79 Aligned_cols=249 Identities=26% Similarity=0.352 Sum_probs=208.6
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
..|+....||+|.||.||+|... .++.||+|++.... +...+++.+|+.++.+++++||.++|+.+..+..+.++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 45677789999999999999965 78999999998765 45567889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
|.||++.+.++.... +++..+..++.++..|+.||| ..+.+|||||+.||++..+|.+|++|||.+..+.....
T Consensus 93 ~~gGsv~~lL~~~~~-~~E~~i~~ilre~l~~l~ylH----~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~- 166 (467)
T KOG0201|consen 93 CGGGSVLDLLKSGNI-LDEFEIAVILREVLKGLDYLH----SEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK- 166 (467)
T ss_pred hcCcchhhhhccCCC-CccceeeeehHHHHHHhhhhh----hcceecccccccceeEeccCcEEEEecceeeeeechhh-
Confidence 999999999987553 477788889999999999999 67899999999999999999999999999987754332
Q ss_pred eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhh
Q 005040 585 VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREE 664 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (717)
.....+||+.|||||++....|+.|+||||+|++.+||.+|.+|+....+.. ..-.+. +..+
T Consensus 167 -rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr--------------vlflIp---k~~P 228 (467)
T KOG0201|consen 167 -RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR--------------VLFLIP---KSAP 228 (467)
T ss_pred -ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce--------------EEEecc---CCCC
Confidence 2256789999999999998899999999999999999999999997754311 000000 0111
Q ss_pred hhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 665 QAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 665 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
+.... .+++.+.+++..|+..||++||+|+++++.
T Consensus 229 P~L~~--~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 229 PRLDG--DFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred Ccccc--ccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 11122 567779999999999999999999998863
No 38
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=2.6e-39 Score=344.38 Aligned_cols=257 Identities=24% Similarity=0.383 Sum_probs=204.7
Q ss_pred hccCCccccccccccEEEEEEEe------cCCCeEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCCe
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTL------SDGTNVAIKIFNLQL-ERAFRSFDSECEILRNV-RHRNLLKILGSCSNLDF 497 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~ 497 (717)
.++|++.+.||+|+||.||+|.+ .++..||||+++... ....+.+.+|+++++.+ +||||+++++++.+.+.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 45788999999999999999974 246689999986443 23346788999999999 89999999999999999
Q ss_pred eEEEEEccCCCCHHHHHhhCC-----------------------------------------------------------
Q 005040 498 KALVLEFMPNGSLEKWLYSHN----------------------------------------------------------- 518 (717)
Q Consensus 498 ~~lv~e~~~~g~L~~~l~~~~----------------------------------------------------------- 518 (717)
.++||||+++|+|.++++...
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 999999999999999997431
Q ss_pred ---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 519 ---------------YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 519 ---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 269 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA----SKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN 269 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCchhhEEEECCCcEEEecCccceeccCccc
Confidence 24788899999999999999999 67899999999999999999999999999987644332
Q ss_pred ceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchh
Q 005040 584 SVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVR 662 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (717)
........++..|+|||++.+..++.++|||||||++|||++ |..||...... ....+++.......
T Consensus 270 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~----------- 337 (375)
T cd05104 270 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD-SKFYKMIKEGYRML----------- 337 (375)
T ss_pred ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch-HHHHHHHHhCccCC-----------
Confidence 222223345678999999999999999999999999999998 88888653221 12222222111000
Q ss_pred hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 005040 663 EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRK 704 (717)
Q Consensus 663 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~ 704 (717)
.+...+.++.+++.+||+.||++||++.|+++.|++
T Consensus 338 ------~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 338 ------SPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred ------CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 001123568899999999999999999999999986
No 39
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4e-40 Score=340.09 Aligned_cols=248 Identities=26% Similarity=0.351 Sum_probs=207.9
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALV 501 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv 501 (717)
.+-|+..+.||.|+-|.|-.|++. +|+.+|||++.+.. ......+.+|+-+|+-+.|||++++++++++..++|+|
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence 356788899999999999999975 89999999997663 22345678899999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCC
Q 005040 502 LEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEG 581 (717)
Q Consensus 502 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 581 (717)
.||+++|-|.+++-..+. +++..+.+++.||+.|+.|+| ..+|+|||+||+|+|+|..+++||+|||+|..-.++
T Consensus 91 lEyv~gGELFdylv~kG~-l~e~eaa~ff~QIi~gv~yCH----~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g 165 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRKGP-LPEREAAHFFRQILDGVSYCH----AFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPG 165 (786)
T ss_pred EEecCCchhHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHh----hhcceeccCCchhhhhhcccCEeeeccceeecccCC
Confidence 999999999999987765 888889999999999999999 678999999999999999999999999999864332
Q ss_pred CCceeeeccccCccccCCCccCCCCc-CcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccc
Q 005040 582 EDSVIQTMTMATIGYMAPEYGSEGIV-STKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANL 660 (717)
Q Consensus 582 ~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (717)
. .-...||++.|.|||++.+..| +.++||||+|||||.|+||+.||++. .++......
T Consensus 166 k---lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd-----Nir~LLlKV------------- 224 (786)
T KOG0588|consen 166 K---LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD-----NIRVLLLKV------------- 224 (786)
T ss_pred c---cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc-----cHHHHHHHH-------------
Confidence 2 2345689999999999999887 68999999999999999999999852 222221111
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 661 VREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 661 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
....+.-+...+.++.+|+.+|+.+||+.|.|++||++.
T Consensus 225 --~~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 225 --QRGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred --HcCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 111122233556778899999999999999999999874
No 40
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=4.1e-39 Score=342.54 Aligned_cols=259 Identities=24% Similarity=0.404 Sum_probs=205.4
Q ss_pred hccCCccccccccccEEEEEEEec------CCCeEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCCe
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS------DGTNVAIKIFNLQL-ERAFRSFDSECEILRNV-RHRNLLKILGSCSNLDF 497 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~ 497 (717)
.++|++.+.||+|+||.||+|... ++..||+|++.... ......+.+|+++++.+ +||||+++++++.+.+.
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 358899999999999999998742 34579999987543 33446788999999999 89999999999999999
Q ss_pred eEEEEEccCCCCHHHHHhhCC-----------------------------------------------------------
Q 005040 498 KALVLEFMPNGSLEKWLYSHN----------------------------------------------------------- 518 (717)
Q Consensus 498 ~~lv~e~~~~g~L~~~l~~~~----------------------------------------------------------- 518 (717)
.++||||+++|+|.++++...
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 999999999999999986421
Q ss_pred ----------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceeee
Q 005040 519 ----------YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQT 588 (717)
Q Consensus 519 ----------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~ 588 (717)
..+++..+.+++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++............
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH----~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~ 272 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA----SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKG 272 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHH----HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeecc
Confidence 23678889999999999999999 6899999999999999999999999999998664332222222
Q ss_pred ccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhh
Q 005040 589 MTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAF 667 (717)
Q Consensus 589 ~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (717)
...++..|+|||++.+..++.++|||||||++|||++ |+.||....... ........... ..
T Consensus 273 ~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~~~~~~~~~~--------~~-------- 335 (374)
T cd05106 273 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KFYKMVKRGYQ--------MS-------- 335 (374)
T ss_pred CCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HHHHHHHcccC--------cc--------
Confidence 3345678999999988999999999999999999997 999997642221 11111111000 00
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhH
Q 005040 668 SDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIK 706 (717)
Q Consensus 668 ~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~ 706 (717)
.+...+.++.+++.+||+.||++|||+.++++.|+++.
T Consensus 336 -~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 336 -RPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred -CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 00112456889999999999999999999999999864
No 41
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-39 Score=315.39 Aligned_cols=269 Identities=26% Similarity=0.319 Sum_probs=204.6
Q ss_pred HhccCCccccccccccEEEEEEEec-CCCeEEEEEec--hhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeec-----CC
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFN--LQLERAFRSFDSECEILRNVRHRNLLKILGSCSN-----LD 496 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~--~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~-----~~ 496 (717)
....|...+.||+|+||.|+.|..+ +|+.||+|.+. ....-..++..+|+++|+.++|+||+.+.+.+.. ..
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 4456666789999999999999875 89999999887 3334455677889999999999999999998754 45
Q ss_pred eeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeecccc
Q 005040 497 FKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISK 576 (717)
Q Consensus 497 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 576 (717)
..|+|+|+|+ .||.+.++.+.. ++...+..++.|+++||+|+| +-+|+|||+||+|++++.+...||+|||+|+
T Consensus 100 DvYiV~elMe-tDL~~iik~~~~-L~d~H~q~f~YQiLrgLKyiH----SAnViHRDLKPsNll~n~~c~lKI~DFGLAR 173 (359)
T KOG0660|consen 100 DVYLVFELME-TDLHQIIKSQQD-LTDDHAQYFLYQILRGLKYIH----SANVIHRDLKPSNLLLNADCDLKICDFGLAR 173 (359)
T ss_pred eeEEehhHHh-hHHHHHHHcCcc-ccHHHHHHHHHHHHHhcchhh----cccccccccchhheeeccCCCEEecccccee
Confidence 7899999994 599999987654 888999999999999999999 7889999999999999999999999999999
Q ss_pred ccCCCCCceeeeccccCccccCCCc-cCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCc----
Q 005040 577 LLGEGEDSVIQTMTMATIGYMAPEY-GSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHR---- 651 (717)
Q Consensus 577 ~~~~~~~~~~~~~~~~t~~y~aPE~-~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~---- 651 (717)
...........+..+.|.+|+|||. +....|+.+.||||.|||+.||++|++-|.+.. ....-..+.......
T Consensus 174 ~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d--~v~Ql~lI~~~lGtP~~e~ 251 (359)
T KOG0660|consen 174 YLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKD--YVHQLQLILELLGTPSEED 251 (359)
T ss_pred eccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCc--hHHHHHHHHHhcCCCCHHH
Confidence 8865422223355678999999995 456789999999999999999999999887621 111122222222111
Q ss_pred hhhhcccc---chh-----hhhhh-hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 652 LTEVVDAN---LVR-----EEQAF-SDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 652 ~~~~~~~~---~~~-----~~~~~-~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
+..+-... +.. ....+ .........+.+++.+||..||.+|+|++|+++.
T Consensus 252 l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 252 LQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 11111000 000 00000 0112344678999999999999999999999864
No 42
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-41 Score=308.98 Aligned_cols=251 Identities=25% Similarity=0.350 Sum_probs=204.5
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
++.|++.+.||+|+|+.||++... +|+.+|+|++.... ....+.+.+|+++-+.|+||||+++.+.+.+....|+|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 467888899999999999998764 89999999987554 346678899999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCC---CCcEEEeeeccccccC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDE---NMVAHVSDFGISKLLG 579 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfgl~~~~~ 579 (717)
|+|+|++|..-+-.. ...++..+...++||+++|.|+| .++|||||+||+|+++-+ ..-+||+|||++..++
T Consensus 90 e~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH----~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~ 164 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCH----SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN 164 (355)
T ss_pred ecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH----hcCceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence 999999997555443 34788899999999999999999 789999999999999953 4469999999999887
Q ss_pred CCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhcccc
Q 005040 580 EGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDAN 659 (717)
Q Consensus 580 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (717)
.+ .......|||+|||||+.+..+|+..+|||+.||++|-++.|+.||.+.. ...+.+.+.+. .
T Consensus 165 ~g---~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~--~~rlye~I~~g-----------~ 228 (355)
T KOG0033|consen 165 DG---EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED--QHRLYEQIKAG-----------A 228 (355)
T ss_pred Cc---cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc--HHHHHHHHhcc-----------c
Confidence 32 23456789999999999999999999999999999999999999997621 11222211110 0
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 660 LVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 660 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
+... .++....+++..+++++|+..||++|.|+.|++.
T Consensus 229 yd~~---~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 229 YDYP---SPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred cCCC---CcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 0000 0122345567889999999999999999999874
No 43
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.4e-40 Score=304.59 Aligned_cols=252 Identities=29% Similarity=0.380 Sum_probs=207.7
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhh--------HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecC
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--------ERAFRSFDSECEILRNV-RHRNLLKILGSCSNL 495 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~ 495 (717)
-+.|...+.+|.|..++|-++.++ +|+.+|+|++.... .+..+.-.+|+.+|+++ .||+|+++.++|+..
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 467788889999999999998865 78999999986432 33445667899999999 699999999999999
Q ss_pred CeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccc
Q 005040 496 DFKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGIS 575 (717)
Q Consensus 496 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 575 (717)
..+++|+|.|+.|.|.+++.+.-. ++++...+|+.|+.+|++||| .+.|||||+||+|||+|++.++||+|||++
T Consensus 96 sF~FlVFdl~prGELFDyLts~Vt-lSEK~tR~iMrqlfegVeylH----a~~IVHRDLKpENILlddn~~i~isDFGFa 170 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSKVT-LSEKETRRIMRQLFEGVEYLH----ARNIVHRDLKPENILLDDNMNIKISDFGFA 170 (411)
T ss_pred chhhhhhhhcccchHHHHhhhhee-ecHHHHHHHHHHHHHHHHHHH----HhhhhhcccChhheeeccccceEEecccee
Confidence 999999999999999999987543 899999999999999999999 788999999999999999999999999999
Q ss_pred cccCCCCCceeeeccccCccccCCCccC------CCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCC
Q 005040 576 KLLGEGEDSVIQTMTMATIGYMAPEYGS------EGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLP 649 (717)
Q Consensus 576 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~------~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 649 (717)
+.+.++..- ...+|||+|+|||.+. ...|+...|+||+||+||.++.|.+||.. ..++.+.+.+.+.
T Consensus 171 ~~l~~GekL---relCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwH--RkQmlMLR~ImeG-- 243 (411)
T KOG0599|consen 171 CQLEPGEKL---RELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWH--RKQMLMLRMIMEG-- 243 (411)
T ss_pred eccCCchhH---HHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHhc--
Confidence 998765532 4568999999999543 45688999999999999999999999965 2222222222111
Q ss_pred CchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 650 HRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
.+. -..+++.+.+....++|.+|+++||.+|.|++|+++.
T Consensus 244 ---------kyq---F~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 244 ---------KYQ---FRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred ---------ccc---cCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 000 0123445677788999999999999999999999863
No 44
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=8.3e-39 Score=328.46 Aligned_cols=249 Identities=24% Similarity=0.308 Sum_probs=200.0
Q ss_pred CCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 429 FNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 429 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
|+..+.||+|+||.||+|... +++.||+|.+.... ......+.+|++++++++|++|+++++++.+.+..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 677889999999999999864 79999999987543 22334578899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 505 MPNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 505 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++|+|||++........
T Consensus 82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 157 (285)
T cd05631 82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQ----RERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGET 157 (285)
T ss_pred cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH----hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCe
Confidence 9999999888643 335899999999999999999999 68999999999999999999999999999987543221
Q ss_pred ceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhh
Q 005040 584 SVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVRE 663 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (717)
.....||..|+|||++.+..++.++||||+||++|||++|+.||........ ... +...... .
T Consensus 158 ---~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~-~~~-~~~~~~~------------~ 220 (285)
T cd05631 158 ---VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK-REE-VDRRVKE------------D 220 (285)
T ss_pred ---ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh-HHH-HHHHhhc------------c
Confidence 2334689999999999999999999999999999999999999976322111 001 1100000 0
Q ss_pred hhhhhhhHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 005040 664 EQAFSDKMDCLFSIMDLALDCCMDTPHKRIH-----MTDAAA 700 (717)
Q Consensus 664 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt-----~~ev~~ 700 (717)
. ......++.++.+++.+||+.||++||+ ++++++
T Consensus 221 ~--~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 221 Q--EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred c--ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 0 0111234566889999999999999997 777776
No 45
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-40 Score=331.66 Aligned_cols=265 Identities=26% Similarity=0.400 Sum_probs=221.1
Q ss_pred HhccCCccccccccccEEEEEEEecCCCeEEEEEechhhH-HHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEE
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLE-RAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLE 503 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 503 (717)
..+...+.++||+|.||.|..++...+..||||+++..+. ....+|.+|+++|.+++||||+.++|+|..++.+++|+|
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E 615 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE 615 (807)
T ss_pred chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence 3456778899999999999999998889999999987764 345789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCC-CCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 504 FMPNGSLEKWLYSHNYF-LDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 504 ~~~~g~L~~~l~~~~~~-~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
||++|+|.+|+..+..+ ...+...+|+.||+.|++||. +-++||||+.++|+|+|.++++||+|||+++-+-.++
T Consensus 616 YmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLe----s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~ 691 (807)
T KOG1094|consen 616 YMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLE----SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGD 691 (807)
T ss_pred HHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHH----hhchhhccccccceeecCcccEEecCcccccccccCC
Confidence 99999999999987433 355667789999999999999 6789999999999999999999999999999776667
Q ss_pred CceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh--CCCCCCccccCcchHHHHHHhhCCCchhhhccccc
Q 005040 583 DSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT--EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANL 660 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (717)
....+...+-++.|||||.+.-+.++.++|||+||+++||+++ ...||....+. +..+-.....+..-..+
T Consensus 692 yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e--~vven~~~~~~~~~~~~----- 764 (807)
T KOG1094|consen 692 YYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE--QVVENAGEFFRDQGRQV----- 764 (807)
T ss_pred ceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH--HHHHhhhhhcCCCCcce-----
Confidence 7777777778999999999999999999999999999999876 77898764332 22222222222221111
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 005040 661 VREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKI 705 (717)
Q Consensus 661 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~ 705 (717)
-.+.+.-|+.++.+++.+||+.+-++||+++++...|.+.
T Consensus 765 -----~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 765 -----VLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred -----eccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 1123346778899999999999999999999999888754
No 46
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=5.2e-39 Score=333.21 Aligned_cols=268 Identities=22% Similarity=0.298 Sum_probs=202.2
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhhH-HHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLE-RAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLE 503 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 503 (717)
.++|++.+.||+|+||.||+|..+ +++.||+|++..... .....+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999976 789999999875432 223456789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 504 FMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 504 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
|+. ++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH----~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 157 (303)
T cd07869 84 YVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIH----QRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPS- 157 (303)
T ss_pred CCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCC-
Confidence 995 6899988876666899999999999999999999 6899999999999999999999999999987543221
Q ss_pred ceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhC-CC--chhhh----
Q 005040 584 SVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESL-PH--RLTEV---- 655 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~--~~~~~---- 655 (717)
.......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.......+........ +. .+...
T Consensus 158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (303)
T cd07869 158 -HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLP 236 (303)
T ss_pred -ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcc
Confidence 11233467899999998755 55889999999999999999999999764322222221111100 00 00000
Q ss_pred -ccc-cc----hhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 656 -VDA-NL----VREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 656 -~~~-~~----~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.++ .+ .............+..+.+++.+|++.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 237 HFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred ccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 000 00 0000000111123356789999999999999999999985
No 47
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.2e-39 Score=329.56 Aligned_cols=249 Identities=35% Similarity=0.539 Sum_probs=196.1
Q ss_pred ccccccccccEEEEEEEec-----CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 431 ECNLLGTGGFGSVYKGTLS-----DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 431 ~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
..+.||+|.||.||+|.+. .+..|+||+++... .+..+.+.+|++.+++++||||++++|++...+..++|+||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 3568999999999999976 35679999996543 33467899999999999999999999999988889999999
Q ss_pred cCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 505 MPNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 505 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
+++|+|.+++... ...+++..+..|+.|+++||+||| +.+++|+||+++||+++.++.+||+|||++........
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh----~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~ 158 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLH----SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK 158 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHH----HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred cccccccccccccccccccccccccccccccccccccc----cccccccccccccccccccccccccccccccccccccc
Confidence 9999999999987 566899999999999999999999 57899999999999999999999999999987743333
Q ss_pred ceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchh
Q 005040 584 SVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVR 662 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (717)
............|+|||.+....++.++||||||+++||+++ |+.||..... ......+... .
T Consensus 159 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~--~~~~~~~~~~---~----------- 222 (259)
T PF07714_consen 159 YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN--EEIIEKLKQG---Q----------- 222 (259)
T ss_dssp EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH--HHHHHHHHTT---E-----------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccccc---c-----------
Confidence 333344557888999999988889999999999999999999 6788865311 1111111110 0
Q ss_pred hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 005040 663 EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKL 702 (717)
Q Consensus 663 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L 702 (717)
.......++..+.+++.+||+.+|++|||+.++++.|
T Consensus 223 ---~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 223 ---RLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ---ETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ---cceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 0011123456688999999999999999999999886
No 48
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=5.9e-39 Score=326.22 Aligned_cols=256 Identities=22% Similarity=0.356 Sum_probs=206.1
Q ss_pred hccCCccccccccccEEEEEEEec----CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS----DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKAL 500 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~l 500 (717)
..+|++.+.||+|+||.||+|.++ .+..||+|+++... ....+.+.+|+.++++++||||+++++++...+..++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 357888999999999999999753 45689999987653 2334678899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCC
Q 005040 501 VLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGE 580 (717)
Q Consensus 501 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 580 (717)
||||+++|+|.+++......+++..++.++.|++.||+||| +.+++||||||+||+++.++.++++|||.+.....
T Consensus 84 v~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH----~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~ 159 (266)
T cd05064 84 VTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLS----EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS 159 (266)
T ss_pred EEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH----HCCEeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence 99999999999999876666899999999999999999999 67899999999999999999999999998765422
Q ss_pred CCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhcccc
Q 005040 581 GEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDAN 659 (717)
Q Consensus 581 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (717)
... .......++..|+|||...+..++.++|||||||++||+++ |+.||...... ...+.+....
T Consensus 160 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~--~~~~~~~~~~----------- 225 (266)
T cd05064 160 EAI-YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ--DVIKAVEDGF----------- 225 (266)
T ss_pred cch-hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHHCCC-----------
Confidence 111 11112234678999999999999999999999999999875 99999753221 1111111100
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 005040 660 LVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKI 705 (717)
Q Consensus 660 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~ 705 (717)
..+.+..++..+.+++.+||+.+|++||++.|+.+.|+++
T Consensus 226 ------~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 226 ------RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred ------CCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 0011224556788999999999999999999999998764
No 49
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.6e-38 Score=333.44 Aligned_cols=265 Identities=22% Similarity=0.286 Sum_probs=206.1
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLE 503 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 503 (717)
.++|++.+.||+|+||.||++... ++..||+|++.... ......+.+|++++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 368999999999999999999976 78899999987653 3345678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 504 FMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 504 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
|+++|+|.+++.... .+++..+..++.|++.||.|||+ ..+|+||||||+||+++.++.+||+|||++.......
T Consensus 84 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 158 (331)
T cd06649 84 HMDGGSLDQVLKEAK-RIPEEILGKVSIAVLRGLAYLRE---KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM- 158 (331)
T ss_pred cCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHhh---cCCEEcCCCChhhEEEcCCCcEEEccCcccccccccc-
Confidence 999999999998654 48899999999999999999994 2469999999999999999999999999987653321
Q ss_pred ceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCc------------
Q 005040 584 SVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHR------------ 651 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~------------ 651 (717)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+...........
T Consensus 159 ---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (331)
T cd06649 159 ---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAK--ELEAIFGRPVVDGEEGEPHSISPRP 233 (331)
T ss_pred ---cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHhcccccccccCCccccCccc
Confidence 22346899999999999999999999999999999999999999653221 1111111100000
Q ss_pred -------------------hhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 652 -------------------LTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 652 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
..+..+. +............++.++.+++.+||+.||++|||+.|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 234 RPPGRPVSGHGMDSRPAMAIFELLDY-IVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred ccccccccccccccccchhHHHHHHH-HHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000 000000000011345678999999999999999999999875
No 50
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-39 Score=298.01 Aligned_cols=265 Identities=23% Similarity=0.287 Sum_probs=211.7
Q ss_pred HHHhccCCccccccccccEEEEEEE-ecCCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeec-----CC
Q 005040 423 RRATDEFNECNLLGTGGFGSVYKGT-LSDGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSN-----LD 496 (717)
Q Consensus 423 ~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~-----~~ 496 (717)
....++|++.+.+|+|||+.||.++ ..+++.+|+|++.....+..+..++|++..++++|||+++++++... ..
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~ 96 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH 96 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence 3345789999999999999999998 45889999999987777777889999999999999999999998743 34
Q ss_pred eeEEEEEccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeec
Q 005040 497 FKALVLEFMPNGSLEKWLYS---HNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFG 573 (717)
Q Consensus 497 ~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 573 (717)
..|++++|...|+|.+.++. .+..+++.++..|+.++++||.+||+.. .+++||||||.||++++.+.+++.|||
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~--~~yAH~DiKP~NILls~~~~~vl~D~G 174 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE--PPYAHRDIKPANILLSDSGLPVLMDLG 174 (302)
T ss_pred eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC--CcccccCCCcceeEecCCCceEEEecc
Confidence 58999999999999999984 3557999999999999999999999643 369999999999999999999999999
Q ss_pred cccccCCCCCce-------eeeccccCccccCCCcc---CCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHH
Q 005040 574 ISKLLGEGEDSV-------IQTMTMATIGYMAPEYG---SEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRW 643 (717)
Q Consensus 574 l~~~~~~~~~~~-------~~~~~~~t~~y~aPE~~---~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~ 643 (717)
.++...-..... .......|..|+|||.+ .+...++++|||||||++|+|+.|..||+.....+..+.-
T Consensus 175 S~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaL- 253 (302)
T KOG2345|consen 175 SATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLAL- 253 (302)
T ss_pred CccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEE-
Confidence 998654221111 11233568999999965 4456789999999999999999999999764332221111
Q ss_pred HHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 005040 644 VKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKI 705 (717)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~ 705 (717)
.+....+ .++....+++.+.+++..|+++||.+||++.+++..+..+
T Consensus 254 ----------Av~n~q~-----s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 254 ----------AVQNAQI-----SIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred ----------eeecccc-----ccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 1111111 1222233677899999999999999999999999998765
No 51
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1e-39 Score=332.61 Aligned_cols=250 Identities=22% Similarity=0.287 Sum_probs=211.8
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCe-eEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDF-KALVL 502 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~-~~lv~ 502 (717)
++|..++++|+|+||.++.++++ +++.+++|.+.... ....+...+|+.++++++|||||.+.+.|.+++. .++||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 57888999999999999999876 78889999886554 3444578889999999999999999999988887 99999
Q ss_pred EccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCC
Q 005040 503 EFMPNGSLEKWLYSHN-YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEG 581 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 581 (717)
+|++||++.+.+.+.. ..++++.+..++.|++.|+.||| +..|+|||||+.||+++.++.|||+|||+|+.+.+.
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH----~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLH----ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH----hhhhhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 9999999999998654 77999999999999999999999 678999999999999999999999999999998765
Q ss_pred CCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccch
Q 005040 582 EDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLV 661 (717)
Q Consensus 582 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (717)
.. ......||+.||.||.+.+..|..|+||||+||++|||++-+++|.+... ...+... ..
T Consensus 160 ~~--~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m-----~~Li~ki------------~~ 220 (426)
T KOG0589|consen 160 DS--LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM-----SELILKI------------NR 220 (426)
T ss_pred hh--hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch-----HHHHHHH------------hh
Confidence 42 23556899999999999999999999999999999999999999976321 1111111 11
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 662 REEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 662 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
.. ..+.+..++.++..++..|++.+|+.||++.+++..
T Consensus 221 ~~--~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 221 GL--YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred cc--CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 10 012234567789999999999999999999999987
No 52
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=5.1e-39 Score=330.96 Aligned_cols=245 Identities=24% Similarity=0.324 Sum_probs=200.6
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36888999999999999999976 78999999987543 234456888999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
||+++|+|.+++...+ .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~ 155 (291)
T cd05612 81 EYVPGGELFSYLRNSG-RFSNSTGLFYASEIVCALEYLH----SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRT 155 (291)
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCc
Confidence 9999999999998654 4889999999999999999999 6899999999999999999999999999998654321
Q ss_pred CceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchh
Q 005040 583 DSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVR 662 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (717)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+.+... . .
T Consensus 156 -----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~--~~~~~i~~~---~--------~-- 215 (291)
T cd05612 156 -----WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF--GIYEKILAG---K--------L-- 215 (291)
T ss_pred -----ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhC---C--------c--
Confidence 2346899999999999888999999999999999999999999753211 111111100 0 0
Q ss_pred hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHHH
Q 005040 663 EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIH-----MTDAAAK 701 (717)
Q Consensus 663 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt-----~~ev~~~ 701 (717)
.+ +..++..+.+++.+||+.||.+||+ ++|+++.
T Consensus 216 ---~~--~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 216 ---EF--PRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred ---CC--CccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 00 0122456789999999999999995 7777654
No 53
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=8.4e-39 Score=328.95 Aligned_cols=264 Identities=21% Similarity=0.286 Sum_probs=201.5
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
++|+..+.||+|+||+||+|..+ +++.||+|+++... ......+.+|++++++++||||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 57899999999999999999875 78999999986443 22334677899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
++ |+|.+++...+..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 85 ~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH----~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~- 158 (288)
T cd07871 85 LD-SDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCH----KRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK- 158 (288)
T ss_pred CC-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc-
Confidence 97 5999999877666899999999999999999999 68999999999999999999999999999876532221
Q ss_pred eeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCC----chhhh----
Q 005040 585 VIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPH----RLTEV---- 655 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~---- 655 (717)
......+++.|+|||++.+ ..++.++||||+||++|||++|+.||......+ .+..... .... .+..+
T Consensus 159 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~ 235 (288)
T cd07871 159 -TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKE-ELHLIFR-LLGTPTEETWPGITSNE 235 (288)
T ss_pred -cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH-HhCCCChHHhhccccch
Confidence 1233457899999998765 568999999999999999999999997532211 1111111 1100 01110
Q ss_pred -----ccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 656 -----VDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 656 -----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
..+..... +........+.++.+++.+|+..||.+|||++|+++
T Consensus 236 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 236 EFRSYLFPQYRAQ-PLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred hhhccccCccCCC-chHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00100000 000011123456889999999999999999999975
No 54
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=9e-39 Score=333.41 Aligned_cols=259 Identities=25% Similarity=0.431 Sum_probs=207.8
Q ss_pred ccCCccccccccccEEEEEEEec-CCC----eEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGT----NVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKAL 500 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~l 500 (717)
.+|+..+.||+|+||.||+|.+. ++. .||+|+++... ....+.+..|+.+++.++||||++++|++... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 57899999999999999999864 343 38999986443 34456788999999999999999999998764 5689
Q ss_pred EEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCC
Q 005040 501 VLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGE 580 (717)
Q Consensus 501 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 580 (717)
|+||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 86 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH----~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 86 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE----ERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 161 (316)
T ss_pred eeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH----hcCeeccccchhheEecCCCcEEEccccccccccC
Confidence 99999999999999987667899999999999999999999 68899999999999999999999999999987754
Q ss_pred CCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhcccc
Q 005040 581 GEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDAN 659 (717)
Q Consensus 581 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (717)
...........++..|+|||++.+..++.++||||||+++|||++ |+.||++.... ..........
T Consensus 162 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~--~~~~~~~~~~----------- 228 (316)
T cd05108 162 DEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEKGE----------- 228 (316)
T ss_pred CCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHhCCC-----------
Confidence 333222223335678999999999999999999999999999998 99998753211 1111111100
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHhh
Q 005040 660 LVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKAKF 709 (717)
Q Consensus 660 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~~~ 709 (717)
..+....++.++.+++.+||+.+|++||++.+++..+.++.+..
T Consensus 229 ------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 229 ------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred ------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 00111124456889999999999999999999999999886543
No 55
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.9e-38 Score=325.90 Aligned_cols=256 Identities=28% Similarity=0.516 Sum_probs=207.6
Q ss_pred ccCCccccccccccEEEEEEEecC------CCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLSD------GTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKA 499 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~ 499 (717)
++|+..+.||+|+||.||+|.... ...||+|.+.... ......+.+|++++++++||||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 578889999999999999998642 2579999886543 334467889999999999999999999999989999
Q ss_pred EEEEccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCC
Q 005040 500 LVLEFMPNGSLEKWLYSHN---------------YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDEN 564 (717)
Q Consensus 500 lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~ 564 (717)
++|||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+++||||||+||+++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH----~~~i~H~dlkp~Nil~~~~ 160 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS----SHHFVHRDLAARNCLVGEG 160 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH----hCCeeccccccceEEEcCC
Confidence 9999999999999997531 34788899999999999999999 6789999999999999999
Q ss_pred CcEEEeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHH
Q 005040 565 MVAHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRW 643 (717)
Q Consensus 565 ~~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~ 643 (717)
+.++|+|||++................+++.|+|||++.+..++.++|||||||++|||++ |..||.+.... .....
T Consensus 161 ~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~--~~~~~ 238 (283)
T cd05048 161 LTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ--EVIEM 238 (283)
T ss_pred CcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHH
Confidence 9999999999986544332222334456888999999988899999999999999999998 99998753221 11111
Q ss_pred HHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 005040 644 VKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKI 705 (717)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~ 705 (717)
+.... . ......++.++.+++.+||+.||++||+++|+++.|+++
T Consensus 239 i~~~~-----------~------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 239 IRSRQ-----------L------LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HHcCC-----------c------CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 11100 0 011224567799999999999999999999999999863
No 56
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=5.1e-39 Score=336.67 Aligned_cols=244 Identities=26% Similarity=0.290 Sum_probs=200.3
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
++|++.+.||+|+||.||+|+.+ +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 67899999999999999999976 68999999997553 234466889999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 98 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH----~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 172 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG-RFPNDVAKFYHAELVLAFEYLH----SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT 172 (329)
T ss_pred cCCCCChHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCc
Confidence 9999999999998754 4788899999999999999999 6899999999999999999999999999998764322
Q ss_pred CceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchh
Q 005040 583 DSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVR 662 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (717)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.+... ....+.+. ... .
T Consensus 173 -----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~--~~~~~~i~---~~~--------~-- 232 (329)
T PTZ00263 173 -----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP--FRIYEKIL---AGR--------L-- 232 (329)
T ss_pred -----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH--HHHHHHHh---cCC--------c--
Confidence 234689999999999999999999999999999999999999965211 11111111 000 0
Q ss_pred hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 005040 663 EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIH-----MTDAAA 700 (717)
Q Consensus 663 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt-----~~ev~~ 700 (717)
..+ ..++..+.+++.+||+.||++||+ +++++.
T Consensus 233 ---~~p--~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 233 ---KFP--NWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred ---CCC--CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 000 112345789999999999999997 577664
No 57
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=9.1e-39 Score=334.02 Aligned_cols=241 Identities=23% Similarity=0.261 Sum_probs=195.8
Q ss_pred ccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCCC
Q 005040 433 NLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPNG 508 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 508 (717)
+.||+|+||.||+|..+ +|+.||+|+++... ......+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999865 78999999997653 233456788999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceeee
Q 005040 509 SLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQT 588 (717)
Q Consensus 509 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~ 588 (717)
+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....... ...
T Consensus 81 ~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~lH----~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~--~~~ 153 (323)
T cd05571 81 ELFFHLSRER-VFSEDRARFYGAEIVSALGYLH----SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGA--TMK 153 (323)
T ss_pred cHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----hCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCC--ccc
Confidence 9999998654 4899999999999999999999 68999999999999999999999999999875422111 123
Q ss_pred ccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhh
Q 005040 589 MTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFS 668 (717)
Q Consensus 589 ~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (717)
...||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.. .. ..+
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--~~~~~~~~~---~~------~~~-------- 214 (323)
T cd05571 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFELILM---EE------IRF-------- 214 (323)
T ss_pred ceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH--HHHHHHHHc---CC------CCC--------
Confidence 34689999999999999999999999999999999999999965211 111111110 00 000
Q ss_pred hhHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 005040 669 DKMDCLFSIMDLALDCCMDTPHKRI-----HMTDAAA 700 (717)
Q Consensus 669 ~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~ev~~ 700 (717)
+...+.++.+++.+||+.||++|| ++.++++
T Consensus 215 -p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 215 -PRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred -CCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 112345688999999999999999 7888865
No 58
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2e-39 Score=315.40 Aligned_cols=246 Identities=25% Similarity=0.342 Sum_probs=206.4
Q ss_pred hccCCccccccccccEEEEEEEe-cCCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTL-SDGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALV 501 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv 501 (717)
..+|++.+.||+|.||.|-+|.. ..|+.||||.+++.. ++..-.+.+|+++|+.|+||||++++.+|+..+...+|
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 35788889999999999999974 689999999998765 44455688999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCC
Q 005040 502 LEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEG 581 (717)
Q Consensus 502 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 581 (717)
|||..+|.|++|+.+.+. +++..+.+++.||..|+.|+| .++++|||||.+|||+|.++++||+|||++..+...
T Consensus 132 MEYaS~GeLYDYiSer~~-LsErEaRhfFRQIvSAVhYCH----knrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~ 206 (668)
T KOG0611|consen 132 MEYASGGELYDYISERGS-LSEREARHFFRQIVSAVHYCH----KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADK 206 (668)
T ss_pred EEecCCccHHHHHHHhcc-ccHHHHHHHHHHHHHHHHHHh----hccceecccchhheeecCCCCeeeeccchhhhhccc
Confidence 999999999999998765 999999999999999999999 689999999999999999999999999999988543
Q ss_pred CCceeeeccccCccccCCCccCCCCc-CcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccc
Q 005040 582 EDSVIQTMTMATIGYMAPEYGSEGIV-STKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANL 660 (717)
Q Consensus 582 ~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (717)
. .-+.++|++-|.+||...+..| ++..|-||+||++|-++.|..||++.. ....+++.-.
T Consensus 207 k---fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D-----hk~lvrQIs~----------- 267 (668)
T KOG0611|consen 207 K---FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD-----HKRLVRQISR----------- 267 (668)
T ss_pred c---HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch-----HHHHHHHhhc-----------
Confidence 3 3356789999999999988887 678999999999999999999998731 1122221110
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 661 VREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 661 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
+.+..- +-+.++.-+|+-|+.++|++|.|+.++..
T Consensus 268 -GaYrEP----~~PSdA~gLIRwmLmVNP~RRATieDiAs 302 (668)
T KOG0611|consen 268 -GAYREP----ETPSDASGLIRWMLMVNPERRATIEDIAS 302 (668)
T ss_pred -ccccCC----CCCchHHHHHHHHHhcCcccchhHHHHhh
Confidence 111000 11234568999999999999999998764
No 59
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-39 Score=322.54 Aligned_cols=257 Identities=28% Similarity=0.393 Sum_probs=200.0
Q ss_pred HHHhccCCccccccccccEEEEEEEec-CCCeEEEEEechhhH---------H-----HHHHHHHHHHHHHhcCCCceee
Q 005040 423 RRATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLE---------R-----AFRSFDSECEILRNVRHRNLLK 487 (717)
Q Consensus 423 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---------~-----~~~~~~~e~~~l~~l~hpniv~ 487 (717)
++..++|++.+.||+|.||.|-+|... +++.||+|++.+... . ..+.+.+|+.+|++++|||||+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 445689999999999999999999865 899999999976531 0 1247889999999999999999
Q ss_pred EeeeeecC--CeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC
Q 005040 488 ILGSCSNL--DFKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENM 565 (717)
Q Consensus 488 ~~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~ 565 (717)
++++..+. +..|||+|||..|.+... ......+++.++++++.++..||+||| .++|+||||||+|+|++++|
T Consensus 173 LiEvLDDP~s~~~YlVley~s~G~v~w~-p~d~~els~~~Ar~ylrDvv~GLEYLH----~QgiiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 173 LIEVLDDPESDKLYLVLEYCSKGEVKWC-PPDKPELSEQQARKYLRDVVLGLEYLH----YQGIIHRDIKPSNLLLSSDG 247 (576)
T ss_pred EEEeecCcccCceEEEEEeccCCccccC-CCCcccccHHHHHHHHHHHHHHHHHHH----hcCeeccccchhheEEcCCC
Confidence 99999764 578999999998877532 222233899999999999999999999 78999999999999999999
Q ss_pred cEEEeeeccccccCCCCCc---eeeeccccCccccCCCccCCCC----cCcccchhhHHHHHHHHHhCCCCCCccccCcc
Q 005040 566 VAHVSDFGISKLLGEGEDS---VIQTMTMATIGYMAPEYGSEGI----VSTKCDVYSYGVLLMETFTEKKPTDEMFTGEM 638 (717)
Q Consensus 566 ~~kl~Dfgl~~~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~----~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~ 638 (717)
+|||+|||.+.....+... ..-....|||.|+|||...++. .+.+.||||+||+||.|+.|+.||-+.+.
T Consensus 248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~--- 324 (576)
T KOG0585|consen 248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE--- 324 (576)
T ss_pred cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH---
Confidence 9999999999866322111 1112357999999999766532 46789999999999999999999965321
Q ss_pred hHHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 005040 639 SLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKL 702 (717)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L 702 (717)
+..+ ..++...+ .++...+...++.++|.++|.+||+.|.+..+|....
T Consensus 325 -~~l~---------~KIvn~pL-----~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp 373 (576)
T KOG0585|consen 325 -LELF---------DKIVNDPL-----EFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHP 373 (576)
T ss_pred -HHHH---------HHHhcCcc-----cCCCcccccHHHHHHHHHHhhcChhheeehhhheecc
Confidence 1111 11111111 1223334556788999999999999999999987543
No 60
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.1e-38 Score=335.18 Aligned_cols=253 Identities=24% Similarity=0.302 Sum_probs=204.0
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
++|++.+.||+|+||.||+|... +++.||+|++.... ......+..|+++++.++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36889999999999999999976 68999999997653 233456788999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
||+++|+|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLG-VLSEDHARFYMAEMFEAVDALH----ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-- 153 (333)
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCccccCCCHHHEEECCCCCEEEEeCcCCccccc--
Confidence 9999999999998654 4889999999999999999999 67899999999999999999999999999986543
Q ss_pred CceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchh
Q 005040 583 DSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVR 662 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (717)
......||+.|+|||++.+..++.++||||+||++|||++|+.||......+ ....+... ..... .+...
T Consensus 154 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~--~~~~i~~~-~~~~~---~~~~~- 223 (333)
T cd05600 154 ---YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE--TWENLKYW-KETLQ---RPVYD- 223 (333)
T ss_pred ---ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHH--HHHHHHhc-ccccc---CCCCC-
Confidence 1234468999999999999999999999999999999999999997532211 11111100 00000 00000
Q ss_pred hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 663 EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 663 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
.....++.++.+++.+|+..+|.+||++.++++.
T Consensus 224 -----~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 224 -----DPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred -----ccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 0001345668899999999999999999999864
No 61
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=2.2e-38 Score=322.32 Aligned_cols=257 Identities=26% Similarity=0.450 Sum_probs=209.1
Q ss_pred hccCCccccccccccEEEEEEEec----CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS----DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKAL 500 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~l 500 (717)
.++|++.+.||+|+||.||+|.++ +...||+|+++... ......+.+|+.++++++||||+++++++.+.+..++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 367899999999999999999874 24579999887543 3345678889999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCC
Q 005040 501 VLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGE 580 (717)
Q Consensus 501 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 580 (717)
||||+++++|.+++......+++..+..++.|++.|++||| +.+|+||||||+||++++++.++|+|||++.....
T Consensus 83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh----~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd05033 83 ITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLS----EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLED 158 (266)
T ss_pred EEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence 99999999999999876667899999999999999999999 67899999999999999999999999999987753
Q ss_pred CCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhcccc
Q 005040 581 GEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDAN 659 (717)
Q Consensus 581 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (717)
...........++..|+|||...+..++.++||||||+++|||++ |..||...... ...+.+......
T Consensus 159 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~~~~--------- 227 (266)
T cd05033 159 SEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ--DVIKAVEDGYRL--------- 227 (266)
T ss_pred cccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH--HHHHHHHcCCCC---------
Confidence 222222222345678999999998899999999999999999998 99998653211 111211111000
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 005040 660 LVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKI 705 (717)
Q Consensus 660 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~ 705 (717)
+....++..+.+++.+|++.+|++||++.|+++.|+++
T Consensus 228 --------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 228 --------PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred --------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 01123456688999999999999999999999999875
No 62
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-39 Score=316.44 Aligned_cols=262 Identities=26% Similarity=0.316 Sum_probs=200.6
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCC-----eeE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLD-----FKA 499 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~-----~~~ 499 (717)
.-.|...+++|+|+||.||+|... +++.||||+.....+ .-.+|+++|+.+.|||||++..+|.... ...
T Consensus 23 ~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ln 98 (364)
T KOG0658|consen 23 EISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLN 98 (364)
T ss_pred EEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHH
Confidence 346777899999999999999965 678999998764432 2235999999999999999999884422 335
Q ss_pred EEEEccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCC-CcEEEeeeccc
Q 005040 500 LVLEFMPNGSLEKWLYS---HNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDEN-MVAHVSDFGIS 575 (717)
Q Consensus 500 lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfgl~ 575 (717)
+|||||+. +|.++++. .+..++...+.-++.|+++||+||| +.+|+||||||.|+|+|.+ |.+||||||.|
T Consensus 99 lVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh----~~~IcHRDIKPqNlLvD~~tg~LKicDFGSA 173 (364)
T KOG0658|consen 99 LVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLH----SHGICHRDIKPQNLLVDPDTGVLKICDFGSA 173 (364)
T ss_pred HHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHH----hcCcccCCCChheEEEcCCCCeEEeccCCcc
Confidence 89999975 99999984 2455888888999999999999999 6899999999999999965 99999999999
Q ss_pred cccCCCCCceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhh
Q 005040 576 KLLGEGEDSVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTE 654 (717)
Q Consensus 576 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (717)
+.+..++.+. ....|..|+|||.+.+ ..|+.+.||||.||++.||+-|++-|.+ ..+..++...++......-.+
T Consensus 174 K~L~~~epni---SYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG-~s~~dQL~eIik~lG~Pt~e~ 249 (364)
T KOG0658|consen 174 KVLVKGEPNI---SYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPG-DSSVDQLVEIIKVLGTPTRED 249 (364)
T ss_pred eeeccCCCce---eEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCC-CCHHHHHHHHHHHhCCCCHHH
Confidence 9987665542 3356889999997766 5699999999999999999999999887 334445555555433221111
Q ss_pred h----------ccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 655 V----------VDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 655 ~----------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
+ -.+.+....-..-.....+.++.+++.+++.++|.+|.++.|++.
T Consensus 250 I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 250 IKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred HhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 1 001111111000011244577899999999999999999999875
No 63
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=2.4e-38 Score=337.64 Aligned_cols=259 Identities=25% Similarity=0.417 Sum_probs=205.9
Q ss_pred hccCCccccccccccEEEEEEEec------CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcC-CCceeeEeeeeecCCe
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS------DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVR-HRNLLKILGSCSNLDF 497 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-hpniv~~~~~~~~~~~ 497 (717)
.++|++.+.||+|+||.||+|... .+..||||++.... ....+.+.+|+++++++. ||||+++++++.+.+.
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 468889999999999999999853 23469999997543 334467899999999996 9999999999999999
Q ss_pred eEEEEEccCCCCHHHHHhhCC-----------------------------------------------------------
Q 005040 498 KALVLEFMPNGSLEKWLYSHN----------------------------------------------------------- 518 (717)
Q Consensus 498 ~~lv~e~~~~g~L~~~l~~~~----------------------------------------------------------- 518 (717)
.|+||||+++|+|.+++....
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 999999999999999986421
Q ss_pred ------------------------------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeC
Q 005040 519 ------------------------------------YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLD 562 (717)
Q Consensus 519 ------------------------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~ 562 (717)
..+++..+..++.|+++||.||| +.+|+||||||+||+++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH----~~~ivH~dikp~Nill~ 271 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA----SKNCVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCChHhEEEe
Confidence 23678888999999999999999 67899999999999999
Q ss_pred CCCcEEEeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHH
Q 005040 563 ENMVAHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLR 641 (717)
Q Consensus 563 ~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~ 641 (717)
.++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||........ ..
T Consensus 272 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~-~~ 350 (400)
T cd05105 272 QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST-FY 350 (400)
T ss_pred CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH-HH
Confidence 999999999999987643322222233456788999999988899999999999999999997 9999875322111 11
Q ss_pred HHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhH
Q 005040 642 RWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIK 706 (717)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~ 706 (717)
..+.... . ......++.++.+++.+||+.+|++||++.++.+.|+++.
T Consensus 351 ~~~~~~~----------~-------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 351 NKIKSGY----------R-------MAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred HHHhcCC----------C-------CCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 1111000 0 0111234567889999999999999999999999999764
No 64
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.3e-38 Score=312.52 Aligned_cols=252 Identities=25% Similarity=0.334 Sum_probs=206.1
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
+.|+.++.||.|.-|+||+++.+ ++..+|+|++.+.. +....+...|.+||+.+.||.++.+|+.++.....|+||
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 56778889999999999999986 45889999998775 344556778999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCC
Q 005040 503 EFMPNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEG 581 (717)
Q Consensus 503 e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 581 (717)
|||+||+|....+++ +..+++..++-++..|+-||+||| ..|||+|||||+|||+.++|++-|+||.++......
T Consensus 157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLH----mlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLH----MLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHH----hhceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 999999999999854 567999999999999999999999 789999999999999999999999999997643110
Q ss_pred ---------------------------------CC---------------------ceeeeccccCccccCCCccCCCCc
Q 005040 582 ---------------------------------ED---------------------SVIQTMTMATIGYMAPEYGSEGIV 607 (717)
Q Consensus 582 ---------------------------------~~---------------------~~~~~~~~~t~~y~aPE~~~~~~~ 607 (717)
.. .......+||-.|+|||++.+...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 00 011123478999999999999999
Q ss_pred CcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCC
Q 005040 608 STKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMD 687 (717)
Q Consensus 608 ~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 687 (717)
+.++|+|+|||++|||+.|..||.+....+ .+. .++.. ...++.....+..+.+||++.|.+
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~-Tl~------------NIv~~-----~l~Fp~~~~vs~~akDLIr~LLvK 374 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKE-TLR------------NIVGQ-----PLKFPEEPEVSSAAKDLIRKLLVK 374 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCchh-hHH------------HHhcC-----CCcCCCCCcchhHHHHHHHHHhcc
Confidence 999999999999999999999998743322 111 11111 112333335567789999999999
Q ss_pred CCCCCCC----HHHHHH
Q 005040 688 TPHKRIH----MTDAAA 700 (717)
Q Consensus 688 ~P~~Rpt----~~ev~~ 700 (717)
||.+|.. |+||.+
T Consensus 375 dP~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 375 DPSKRLGSKRGAAEIKR 391 (459)
T ss_pred ChhhhhccccchHHhhc
Confidence 9999998 777654
No 65
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.4e-38 Score=310.39 Aligned_cols=268 Identities=25% Similarity=0.301 Sum_probs=204.6
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhhH--HHHHHHHHHHHHHHhcCCCc-eeeEeeeeecCC-----
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLE--RAFRSFDSECEILRNVRHRN-LLKILGSCSNLD----- 496 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~hpn-iv~~~~~~~~~~----- 496 (717)
...|+.+++||+|+||+||+|+.+ +|+.||+|.+....+ .......+|+.+++.++|+| |+.+++++....
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 346777788999999999999965 889999999876643 23455688999999999999 999999997776
Q ss_pred -eeEEEEEccCCCCHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeee
Q 005040 497 -FKALVLEFMPNGSLEKWLYSHN---YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDF 572 (717)
Q Consensus 497 -~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 572 (717)
..++||||++. +|..++.... ..++...+..++.|+++||+||| +++|+||||||.||++++.|.+||+||
T Consensus 90 ~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H----~~~IlHRDLKPQNlLi~~~G~lKlaDF 164 (323)
T KOG0594|consen 90 GKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLH----SHGILHRDLKPQNLLISSSGVLKLADF 164 (323)
T ss_pred ceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHH----hCCeecccCCcceEEECCCCcEeeecc
Confidence 78999999965 9999999765 35788899999999999999999 789999999999999999999999999
Q ss_pred ccccccCCCCCceeeeccccCccccCCCccCCC-CcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHH-hhCC-
Q 005040 573 GISKLLGEGEDSVIQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVK-ESLP- 649 (717)
Q Consensus 573 gl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~-~~~~- 649 (717)
|+|+...-+.. ..+...+|.+|+|||++.+. .|+...||||+||+++||+++++-|.+..+-+ ++.+... -..|
T Consensus 165 GlAra~~ip~~--~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~-ql~~If~~lGtP~ 241 (323)
T KOG0594|consen 165 GLARAFSIPMR--TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEID-QLFRIFRLLGTPN 241 (323)
T ss_pred chHHHhcCCcc--cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHH-HHHHHHHHcCCCC
Confidence 99997653222 24566789999999987776 79999999999999999999998887643311 1111111 1111
Q ss_pred -Cchhhhcc-ccchhhhhhhh-------hhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 650 -HRLTEVVD-ANLVREEQAFS-------DKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 650 -~~~~~~~~-~~~~~~~~~~~-------~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
+.+..+.. +......+... ..........+++.+|++++|++|.|++.+++.
T Consensus 242 e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 242 EKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred ccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 11222111 00110110000 001111468899999999999999999999875
No 66
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=6.8e-38 Score=322.40 Aligned_cols=260 Identities=29% Similarity=0.457 Sum_probs=209.8
Q ss_pred hccCCccccccccccEEEEEEEec------CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS------DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKA 499 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~ 499 (717)
..+|.+.+.||+|+||.||++... ++..+|+|.+..........+.+|++++++++||||+++++++...+..+
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 467889999999999999999742 34568999987655555677899999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHhhCC------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcE
Q 005040 500 LVLEFMPNGSLEKWLYSHN------------YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVA 567 (717)
Q Consensus 500 lv~e~~~~g~L~~~l~~~~------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~ 567 (717)
+||||+++++|.+++.... ..+++..+..++.|++.||+||| +.+++||||||+||++++++.+
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH----~~~i~H~dlkp~Nili~~~~~~ 159 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA----SQHFVHRDLATRNCLVGENLLV 159 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeecccCcceEEEccCCcE
Confidence 9999999999999997542 24899999999999999999999 6789999999999999999999
Q ss_pred EEeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHh
Q 005040 568 HVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKE 646 (717)
Q Consensus 568 kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~ 646 (717)
+|+|||++................++..|+|||++.+..++.++||||||+++|||++ |..||......+ ....+..
T Consensus 160 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~--~~~~i~~ 237 (288)
T cd05093 160 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE--VIECITQ 237 (288)
T ss_pred EeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHc
Confidence 9999999986643322222233345778999999998899999999999999999998 899986532211 1111111
Q ss_pred hCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHh
Q 005040 647 SLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKAK 708 (717)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~~ 708 (717)
... . .....++.++.+++.+||+.+|.+|||+.++.+.|+++...
T Consensus 238 ~~~-----------~------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 238 GRV-----------L------QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred CCc-----------C------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 000 0 00112345688999999999999999999999999998764
No 67
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-39 Score=344.14 Aligned_cols=257 Identities=24% Similarity=0.314 Sum_probs=210.7
Q ss_pred ccCCccccccccccEEEEEEEecCC-CeEEEEEechhhHHHHHHHHHHHHHHHhcC-CCceeeEeeee-ec------CCe
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLSDG-TNVAIKIFNLQLERAFRSFDSECEILRNVR-HRNLLKILGSC-SN------LDF 497 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-hpniv~~~~~~-~~------~~~ 497 (717)
.++++.+.|.+|||+.||.|....+ ..||+|++-...+...+.+.+|+++|++|+ |||||.+++.. .. ..+
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 4667889999999999999997655 999999998777778889999999999996 99999999932 11 246
Q ss_pred eEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeecccc
Q 005040 498 KALVLEFMPNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISK 576 (717)
Q Consensus 498 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 576 (717)
++|.||||.||.|-+++... ...+.+.++++|+.|+++|+++||.. ..+|+|||||-+|||++.+++.||||||.+.
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~--~pPiIHRDLKiENvLls~~g~~KLCDFGSat 194 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL--KPPIIHRDLKIENVLLSADGNYKLCDFGSAT 194 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC--CCccchhhhhhhheEEcCCCCEEeCcccccc
Confidence 78999999999999999843 33499999999999999999999965 5689999999999999999999999999987
Q ss_pred ccCCCCCce-------eeeccccCccccCCCc---cCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHh
Q 005040 577 LLGEGEDSV-------IQTMTMATIGYMAPEY---GSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKE 646 (717)
Q Consensus 577 ~~~~~~~~~-------~~~~~~~t~~y~aPE~---~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~ 646 (717)
..-...... ..-....|+.|+|||+ ..+...++|+||||+||+||-|+....||++.-
T Consensus 195 t~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg------------ 262 (738)
T KOG1989|consen 195 TKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG------------ 262 (738)
T ss_pred cccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc------------
Confidence 543222110 0112356999999995 577889999999999999999999999998621
Q ss_pred hCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHH
Q 005040 647 SLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKA 707 (717)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~ 707 (717)
...+++..+ .++....++..+.+||+.||++||.+||++.||++.+.++..
T Consensus 263 -----~laIlng~Y-----~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 263 -----KLAILNGNY-----SFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred -----ceeEEeccc-----cCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence 112233222 233334677889999999999999999999999999998865
No 68
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=5.3e-38 Score=317.53 Aligned_cols=251 Identities=26% Similarity=0.384 Sum_probs=203.2
Q ss_pred ccCCccccccccccEEEEEEEecCCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccC
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMP 506 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 506 (717)
++|+..+.||+|+||.||+|.++++..+|+|.+.... ...+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 5688889999999999999998888899999876432 223568889999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCcee
Q 005040 507 NGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVI 586 (717)
Q Consensus 507 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~ 586 (717)
+|+|.++++.....+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||.+........ ..
T Consensus 83 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~-~~ 157 (256)
T cd05114 83 NGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLE----RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY-TS 157 (256)
T ss_pred CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH----HCCccccccCcceEEEcCCCeEEECCCCCccccCCCce-ec
Confidence 99999999865556899999999999999999999 67899999999999999999999999999886533221 11
Q ss_pred eeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhh
Q 005040 587 QTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQ 665 (717)
Q Consensus 587 ~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (717)
.....++..|+|||+..+..++.++||||||+++|||++ |+.||..... ......+...... .
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~--~~~~~~i~~~~~~-----~--------- 221 (256)
T cd05114 158 SSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN--YEVVEMISRGFRL-----Y--------- 221 (256)
T ss_pred cCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHCCCCC-----C---------
Confidence 122235678999999988889999999999999999999 8999865321 1111211111000 0
Q ss_pred hhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 005040 666 AFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKL 702 (717)
Q Consensus 666 ~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L 702 (717)
.+...+.++.+++.+||+.+|++||+++++++.|
T Consensus 222 ---~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 222 ---RPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred ---CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 0011234688999999999999999999999886
No 69
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=3.4e-38 Score=323.01 Aligned_cols=258 Identities=24% Similarity=0.413 Sum_probs=205.4
Q ss_pred ccCCccccccccccEEEEEEEec-CCC----eEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGT----NVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKAL 500 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~l 500 (717)
++|+..+.||+|+||.||+|.+. +++ .|++|.+.... ......+..|+..++++.||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 57888899999999999999864 444 47788775433 3344677888889999999999999998764 45689
Q ss_pred EEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCC
Q 005040 501 VLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGE 580 (717)
Q Consensus 501 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 580 (717)
++||+++|+|.+++......+++..+..++.|++.||+||| +++++||||||+||+++.++.+||+|||+++....
T Consensus 86 i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLE----EHRMVHRNLAARNILLKSDSIVQIADFGVADLLYP 161 (279)
T ss_pred EEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH----HCCEeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence 99999999999999877667899999999999999999999 67899999999999999999999999999987644
Q ss_pred CCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhcccc
Q 005040 581 GEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDAN 659 (717)
Q Consensus 581 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (717)
...........++..|+|||+..++.++.++||||||+++||+++ |+.||.+.... ...+++.....
T Consensus 162 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--~~~~~~~~~~~---------- 229 (279)
T cd05111 162 DDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH--EVPDLLEKGER---------- 229 (279)
T ss_pred CCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHCCCc----------
Confidence 332222233456788999999988899999999999999999998 99998764221 11222211000
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHh
Q 005040 660 LVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKAK 708 (717)
Q Consensus 660 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~~ 708 (717)
.+....++.++.+++.+||..+|++|||+.|+++.|..+.+.
T Consensus 230 -------~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 230 -------LAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred -------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 000112345578899999999999999999999999987654
No 70
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=3.2e-38 Score=318.34 Aligned_cols=248 Identities=27% Similarity=0.438 Sum_probs=198.9
Q ss_pred ccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCCCCH
Q 005040 433 NLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPNGSL 510 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L 510 (717)
+.||+|+||.||+|... +++.||+|.+.... .+....+.+|++++++++||||+++++++.+....++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 36999999999999875 78999999876433 33456788999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceeeecc
Q 005040 511 EKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQTMT 590 (717)
Q Consensus 511 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~ 590 (717)
.+++......+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++...............
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH----~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 156 (252)
T cd05084 81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLE----SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMK 156 (252)
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH----hCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCC
Confidence 9999876666899999999999999999999 688999999999999999999999999998765432211111112
Q ss_pred ccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhh
Q 005040 591 MATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSD 669 (717)
Q Consensus 591 ~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (717)
..+..|+|||.+.++.++.++||||||+++|||++ |..||...... ..........+. ..
T Consensus 157 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~--~~~~~~~~~~~~-----------------~~ 217 (252)
T cd05084 157 QIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ--QTREAIEQGVRL-----------------PC 217 (252)
T ss_pred CCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH--HHHHHHHcCCCC-----------------CC
Confidence 23567999999998899999999999999999998 88888653211 111111110000 01
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 005040 670 KMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLR 703 (717)
Q Consensus 670 ~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~ 703 (717)
+..++..+.+++.+|+..+|++|||+.++.+.|+
T Consensus 218 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 218 PELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 1234567889999999999999999999999886
No 71
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.5e-38 Score=327.26 Aligned_cols=267 Identities=21% Similarity=0.225 Sum_probs=201.1
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLE 503 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 503 (717)
++|++.+.||+|+||.||+|+.+ +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 36889999999999999999976 68899999987543 2334567889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 504 FMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 504 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
|++++.+..+. .....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~-~~~~~~~~~~~~~~~~qi~~~L~~lH----~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 155 (287)
T cd07848 81 YVEKNMLELLE-EMPNGVPPEKVRSYIYQLIKAIHWCH----KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN 155 (287)
T ss_pred cCCCCHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccc
Confidence 99987665544 33445899999999999999999999 67899999999999999999999999999987643221
Q ss_pred ceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHh--hCCCc-hh-------
Q 005040 584 SVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKE--SLPHR-LT------- 653 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~--~~~~~-~~------- 653 (717)
. ......|++.|+|||++.+..++.++||||+||++|||++|+.||......+ ........ ..+.. ..
T Consensus 156 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07848 156 A-NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEID-QLFTIQKVLGPLPAEQMKLFYSNPR 233 (287)
T ss_pred c-cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhhCCCCHHHHHhhhccch
Confidence 1 1223468999999999988889999999999999999999999997632211 11110000 00000 00
Q ss_pred --hhccccchh-hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 654 --EVVDANLVR-EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 654 --~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
....+.... ..........++.++.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 234 FHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred hcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000000000 00000001124567999999999999999999999875
No 72
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2.1e-38 Score=329.74 Aligned_cols=237 Identities=25% Similarity=0.251 Sum_probs=191.7
Q ss_pred ccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCCCCH
Q 005040 435 LGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPNGSL 510 (717)
Q Consensus 435 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L 510 (717)
||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999975 68899999987543 33445678899999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceeeecc
Q 005040 511 EKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQTMT 590 (717)
Q Consensus 511 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~ 590 (717)
.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++...... ......
T Consensus 81 ~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH----~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~~~ 153 (312)
T cd05585 81 FHHLQREG-RFDLSRARFYTAELLCALENLH----KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD--DKTNTF 153 (312)
T ss_pred HHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC--Cccccc
Confidence 99998654 4899999999999999999999 6889999999999999999999999999987543221 112344
Q ss_pred ccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhhh
Q 005040 591 MATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSDK 670 (717)
Q Consensus 591 ~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (717)
.||+.|+|||++.+..++.++||||+||++|||++|+.||..... ........... . ..+
T Consensus 154 ~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~-----~~~~~~~~~~~--------~-------~~~ 213 (312)
T cd05585 154 CGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV-----NEMYRKILQEP--------L-------RFP 213 (312)
T ss_pred cCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH-----HHHHHHHHcCC--------C-------CCC
Confidence 689999999999999999999999999999999999999965311 11111111100 0 001
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 005040 671 MDCLFSIMDLALDCCMDTPHKRIHMTDA 698 (717)
Q Consensus 671 ~~~~~~l~~li~~cl~~~P~~Rpt~~ev 698 (717)
..++.++.+++.+||+.||++||++.++
T Consensus 214 ~~~~~~~~~li~~~L~~dp~~R~~~~~~ 241 (312)
T cd05585 214 DGFDRDAKDLLIGLLSRDPTRRLGYNGA 241 (312)
T ss_pred CcCCHHHHHHHHHHcCCCHHHcCCCCCH
Confidence 1234567899999999999999864333
No 73
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.5e-38 Score=333.68 Aligned_cols=246 Identities=25% Similarity=0.276 Sum_probs=199.9
Q ss_pred hccCCccccccccccEEEEEEEec--CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS--DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKAL 500 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~l 500 (717)
.++|++.+.||+|+||.||+|..+ ++..||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 367999999999999999999864 33689999987543 2334567889999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCC
Q 005040 501 VLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGE 580 (717)
Q Consensus 501 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 580 (717)
||||+++|+|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++.....
T Consensus 109 v~Ey~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNK-RFPNDVGCFYAAQIVLIFEYLQ----SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 999999999999998754 4889999999999999999999 68999999999999999999999999999987643
Q ss_pred CCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccc
Q 005040 581 GEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANL 660 (717)
Q Consensus 581 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (717)
.. ....||+.|+|||++.+..++.++||||+||++|||++|+.||...... ... ....... .
T Consensus 184 ~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~--~~~---~~i~~~~--------~ 245 (340)
T PTZ00426 184 RT-----YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL--LIY---QKILEGI--------I 245 (340)
T ss_pred Cc-----ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH--HHH---HHHhcCC--------C
Confidence 21 2346899999999998888999999999999999999999999753211 000 0000000 0
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 005040 661 VREEQAFSDKMDCLFSIMDLALDCCMDTPHKRI-----HMTDAAAK 701 (717)
Q Consensus 661 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~ev~~~ 701 (717)
.. +...+..+.+++.+|++.||++|+ +++++++.
T Consensus 246 -----~~--p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 246 -----YF--PKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred -----CC--CCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 00 012234577999999999999995 78887653
No 74
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-39 Score=326.37 Aligned_cols=258 Identities=26% Similarity=0.425 Sum_probs=216.9
Q ss_pred HhccCCccccccccccEEEEEEEecC---CC--eEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCee
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTLSD---GT--NVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFK 498 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~~~---~~--~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~ 498 (717)
..+.....++||+|.||.||+|.+.+ |. .||||..+... .+..+.|.+|..+|++++|||||+++|+|.+.. .
T Consensus 387 ~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P-~ 465 (974)
T KOG4257|consen 387 RRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQP-M 465 (974)
T ss_pred ehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccc-e
Confidence 33455567889999999999998632 33 48999887644 445688999999999999999999999998654 6
Q ss_pred EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeecccccc
Q 005040 499 ALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLL 578 (717)
Q Consensus 499 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 578 (717)
.+|||.++-|.|..|++.+...++......++.||+.||+||| +..+|||||..+|||+.+..-||++|||+++.+
T Consensus 466 WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLe----SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ 541 (974)
T KOG4257|consen 466 WIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLE----SKRFVHRDIAARNILVSSPQCVKLADFGLSRYL 541 (974)
T ss_pred eEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHH----hhchhhhhhhhhheeecCcceeeecccchhhhc
Confidence 9999999999999999999888999999999999999999999 789999999999999999999999999999998
Q ss_pred CCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhcc
Q 005040 579 GEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVD 657 (717)
Q Consensus 579 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (717)
........ +...-++.|||||.+.-.+++.++|||.|||.+||++. |..||.+....+ ++-
T Consensus 542 ed~~yYka-S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD-----------------VI~ 603 (974)
T KOG4257|consen 542 EDDAYYKA-SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD-----------------VIG 603 (974)
T ss_pred cccchhhc-cccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc-----------------eEE
Confidence 76554432 33345788999999999999999999999999999987 999998744332 111
Q ss_pred ccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHH
Q 005040 658 ANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKA 707 (717)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~ 707 (717)
.- +.....+-+..|+..+..++.+||+++|.+||++.|+...|+.+.+
T Consensus 604 ~i--EnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 604 HI--ENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred Ee--cCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 11 1112234556889999999999999999999999999999999866
No 75
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=3.2e-38 Score=329.69 Aligned_cols=241 Identities=23% Similarity=0.264 Sum_probs=195.2
Q ss_pred ccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCCC
Q 005040 433 NLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPNG 508 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 508 (717)
+.||+|+||.||++... +|+.||+|++.... ......+.+|+++++.++||||+++++++.+.+..|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46899999999999865 78999999997653 234456778999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceeee
Q 005040 509 SLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQT 588 (717)
Q Consensus 509 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~ 588 (717)
+|..++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++........ ...
T Consensus 81 ~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~--~~~ 153 (323)
T cd05595 81 ELFFHLSRER-VFTEERARFYGAEIVSALEYLH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TMK 153 (323)
T ss_pred cHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCC--ccc
Confidence 9999887654 4899999999999999999999 68999999999999999999999999999875322211 123
Q ss_pred ccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhh
Q 005040 589 MTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFS 668 (717)
Q Consensus 589 ~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (717)
...||+.|+|||++.+..++.++|||||||++|||++|+.||...... .... ...... ..+
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~--~~~~---~~~~~~------~~~-------- 214 (323)
T cd05595 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFE---LILMEE------IRF-------- 214 (323)
T ss_pred cccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH--HHHH---HHhcCC------CCC--------
Confidence 346899999999999999999999999999999999999999653211 1111 000000 000
Q ss_pred hhHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 005040 669 DKMDCLFSIMDLALDCCMDTPHKRI-----HMTDAAA 700 (717)
Q Consensus 669 ~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~ev~~ 700 (717)
+..++.++.+++.+||+.||++|| ++.++++
T Consensus 215 -p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 215 -PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred -CCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 113345678999999999999998 7888765
No 76
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8e-38 Score=309.17 Aligned_cols=276 Identities=26% Similarity=0.388 Sum_probs=217.1
Q ss_pred CHHHHHHHhccCCccccccccccEEEEEEEecCCCeEEEEEechhhHHHHHHHHHHHHHHHhc--CCCceeeEeeeeecC
Q 005040 418 SYLDIRRATDEFNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLERAFRSFDSECEILRNV--RHRNLLKILGSCSNL 495 (717)
Q Consensus 418 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~hpniv~~~~~~~~~ 495 (717)
.....+....+....+.||+|.||.||+|.|+ |+.||||+|....+ +.+.+|.++++.. +|+||+.|++.-..+
T Consensus 202 plLVQRTiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srdE---~SWfrEtEIYqTvmLRHENILgFIaaD~~~ 277 (513)
T KOG2052|consen 202 PLLVQRTIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRDE---RSWFRETEIYQTVMLRHENILGFIAADNKD 277 (513)
T ss_pred hhHhHHhhhheeEEEEEecCccccceeecccc-CCceEEEEecccch---hhhhhHHHHHHHHHhccchhhhhhhccccC
Confidence 34445667788899999999999999999995 89999999975543 5567788888875 999999999875333
Q ss_pred ----CeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhc----CCCCCeEecCCCCCCeeeCCCCcE
Q 005040 496 ----DFKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHC----HSSAPIIHCDLKPTNILLDENMVA 567 (717)
Q Consensus 496 ----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~----~~~~~ivH~dlk~~Nill~~~~~~ 567 (717)
..++||++|.+.|||.||+.... ++.....+++..+|.||+|||.. .+.+.|.|||||+.|||+..++..
T Consensus 278 ~gs~TQLwLvTdYHe~GSL~DyL~r~t--v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C 355 (513)
T KOG2052|consen 278 NGSWTQLWLVTDYHEHGSLYDYLNRNT--VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 355 (513)
T ss_pred CCceEEEEEeeecccCCcHHHHHhhcc--CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcE
Confidence 25689999999999999999854 88999999999999999999942 346679999999999999999999
Q ss_pred EEeeeccccccCCCCCc--eeeeccccCccccCCCccCCCC----c--CcccchhhHHHHHHHHHhCC----------CC
Q 005040 568 HVSDFGISKLLGEGEDS--VIQTMTMATIGYMAPEYGSEGI----V--STKCDVYSYGVLLMETFTEK----------KP 629 (717)
Q Consensus 568 kl~Dfgl~~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~----~--~~~~Dvws~G~il~el~tg~----------~p 629 (717)
.|+|+|+|......... ......+||-+|||||++.... + -..+||||||.++||+..+. .|
T Consensus 356 ~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~P 435 (513)
T KOG2052|consen 356 CIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLP 435 (513)
T ss_pred EEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCC
Confidence 99999999887654322 2334568999999999875532 1 13599999999999997532 57
Q ss_pred CCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHH
Q 005040 630 TDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKA 707 (717)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~ 707 (717)
|.+..+.+.++.+..+ -+...++....++.+...++...+.++|+.||..+|..|.|+-.+.+.|.++.+
T Consensus 436 yyd~Vp~DPs~eeMrk--------VVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 436 YYDVVPSDPSFEEMRK--------VVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred cccCCCCCCCHHHHhc--------ceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 7665555444433222 122333444444455556778889999999999999999999999999999864
No 77
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=5.7e-38 Score=321.87 Aligned_cols=256 Identities=31% Similarity=0.487 Sum_probs=206.2
Q ss_pred hccCCccccccccccEEEEEEEec------CCCeEEEEEechhhHH-HHHHHHHHHHHHHhcCCCceeeEeeeeecCCee
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS------DGTNVAIKIFNLQLER-AFRSFDSECEILRNVRHRNLLKILGSCSNLDFK 498 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~ 498 (717)
.++|.+.+.||+|+||.||+|... +++.||+|++...... ..+.+.+|+++++.++||||+++++++......
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 83 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP 83 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence 356888899999999999999864 3478999998755433 457889999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHhhCC-------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC
Q 005040 499 ALVLEFMPNGSLEKWLYSHN-------------YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENM 565 (717)
Q Consensus 499 ~lv~e~~~~g~L~~~l~~~~-------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~ 565 (717)
++||||+++++|.+++...+ ..+++..+..++.|++.|+.||| +.+++||||||+||+++.++
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH----~~~i~h~dlkp~nili~~~~ 159 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA----SQHFVHRDLATRNCLVGYDL 159 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh----hCCeeccccccceEEEcCCC
Confidence 99999999999999997542 34788899999999999999999 67899999999999999999
Q ss_pred cEEEeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHH
Q 005040 566 VAHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWV 644 (717)
Q Consensus 566 ~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~ 644 (717)
.++|+|||++................+++.|+|||++.+..++.++||||||+++|||++ |..||..... ......+
T Consensus 160 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~--~~~~~~~ 237 (280)
T cd05049 160 VVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN--EEVIECI 237 (280)
T ss_pred eEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHH
Confidence 999999999976543322222233345788999999999999999999999999999999 9999865322 1111211
Q ss_pred HhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 005040 645 KESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRK 704 (717)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~ 704 (717)
...... .....++..+.+++.+||+.||++||++.|+++.|++
T Consensus 238 ~~~~~~-----------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 238 TQGRLL-----------------QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HcCCcC-----------------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 110000 0011344668899999999999999999999998863
No 78
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.9e-38 Score=346.45 Aligned_cols=250 Identities=22% Similarity=0.241 Sum_probs=202.6
Q ss_pred cCCccccccccccEEEEEEEec-C-CCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEcc
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-D-GTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFM 505 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 505 (717)
.|.+.+.||+|+||.||+|... + ++.||+|.+..........+..|+++++.++||||+++++++...+..|+||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 4888999999999999999864 4 6778999776555555567788999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 506 PNGSLEKWLYSH---NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 506 ~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
++|+|.+++... ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++..+....
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH----~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~ 223 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVH----SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV 223 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH----hCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence 999999988642 345889999999999999999999 6899999999999999999999999999998765433
Q ss_pred CceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchh
Q 005040 583 DSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVR 662 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (717)
.........||++|+|||++.+..++.++|||||||++|||++|+.||..... ........... .
T Consensus 224 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~-----~~~~~~~~~~~--------~-- 288 (478)
T PTZ00267 224 SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ-----REIMQQVLYGK--------Y-- 288 (478)
T ss_pred ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhCC--------C--
Confidence 22223445689999999999999999999999999999999999999965211 11111100000 0
Q ss_pred hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 663 EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 663 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
. +.+..++.++.+++.+||..||++||++.++++
T Consensus 289 --~--~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 289 --D--PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred --C--CCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 0 001123456889999999999999999999875
No 79
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4.6e-38 Score=329.86 Aligned_cols=199 Identities=26% Similarity=0.358 Sum_probs=175.0
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLE 503 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 503 (717)
.++|++.+.||+|+||.||+|... ++..+|+|++.... ......+.+|++++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 368999999999999999999976 78889999887543 3344678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 504 FMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 504 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
|+++|+|.+++.... .+++..+..++.|++.|+.|||+ ..+|+||||||+||+++.++.+||+|||++.......
T Consensus 84 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH~---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~- 158 (333)
T cd06650 84 HMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM- 158 (333)
T ss_pred cCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc-
Confidence 999999999998654 47899999999999999999994 2479999999999999999999999999987653221
Q ss_pred ceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCc
Q 005040 584 SVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDE 632 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~ 632 (717)
.....|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 159 ---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 159 ---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred ---cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 1234688999999999988999999999999999999999999875
No 80
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=3.9e-38 Score=319.54 Aligned_cols=256 Identities=29% Similarity=0.474 Sum_probs=211.2
Q ss_pred HhccCCccccccccccEEEEEEEecCCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
...+|+..+.||+|+||.||+|...+++.+|+|++..........+..|+.+++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 45688999999999999999999888999999999866554566788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 505 MPNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 505 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
+++++|.+++... +..+++..+..++.|++.|++||| +.+++|+||||+||+++.++.+||+|||.+........
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH----~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~ 159 (261)
T cd05148 84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLE----EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY 159 (261)
T ss_pred cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccccCcceEEEcCCceEEEccccchhhcCCccc
Confidence 9999999999863 345899999999999999999999 67899999999999999999999999999987643221
Q ss_pred ceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchh
Q 005040 584 SVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVR 662 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (717)
. .....++..|+|||...+..++.++||||||+++|+|++ |+.||..... ....+.+......
T Consensus 160 ~--~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~--~~~~~~~~~~~~~------------ 223 (261)
T cd05148 160 L--SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN--HEVYDQITAGYRM------------ 223 (261)
T ss_pred c--ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH--HHHHHHHHhCCcC------------
Confidence 1 123345778999999988899999999999999999998 8999865321 1111111111000
Q ss_pred hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 005040 663 EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKI 705 (717)
Q Consensus 663 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~ 705 (717)
+....++..+.+++.+||+.||++|||++++++.|+.+
T Consensus 224 -----~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 224 -----PCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred -----CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 11123456688999999999999999999999999863
No 81
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=7.9e-38 Score=317.23 Aligned_cols=255 Identities=22% Similarity=0.414 Sum_probs=207.5
Q ss_pred hccCCccccccccccEEEEEEEecCCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEcc
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFM 505 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 505 (717)
.++|++.++||+|+||.||+|...++..||+|.+.... ...+.+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 46889999999999999999998888899999876543 23467889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 506 PNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 506 ~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
++|+|.++++.. ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.++|+|||++.........
T Consensus 84 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH----~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~ 159 (261)
T cd05072 84 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE----RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT 159 (261)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccccchhhEEecCCCcEEECCCccceecCCCcee
Confidence 999999999753 455889999999999999999999 678999999999999999999999999999876432211
Q ss_pred eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchhh
Q 005040 585 VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVRE 663 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (717)
......++..|+|||+..++.++.++||||||+++|||++ |+.||...... .....+.....
T Consensus 160 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~~~-------------- 222 (261)
T cd05072 160 -AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS--DVMSALQRGYR-------------- 222 (261)
T ss_pred -ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH--HHHHHHHcCCC--------------
Confidence 1222345678999999988889999999999999999998 99998653211 11221111100
Q ss_pred hhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 005040 664 EQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKI 705 (717)
Q Consensus 664 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~ 705 (717)
.+....++.++.+++.+|+..+|++||+++++.+.|+++
T Consensus 223 ---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 223 ---MPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred ---CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 001112445688999999999999999999999999853
No 82
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.2e-37 Score=317.09 Aligned_cols=258 Identities=22% Similarity=0.323 Sum_probs=207.3
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
++|++.+.||+|+||.||+|... +++.||+|.+.... ......+.+|+++++.++||||+++++++.+.+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57889999999999999999965 78999999875322 334466888999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccC
Q 005040 503 EFMPNGSLEKWLYS---HNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLG 579 (717)
Q Consensus 503 e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 579 (717)
||+++|+|.+++.. ....+++..+..++.|++.||.||| +.+++|+||||+||+++.++.++|+|||++....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH----~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~ 157 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH----SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHh----hCCeeCCCCCHHHEEEcCCCCEEECccccceecc
Confidence 99999999988863 2345789999999999999999999 6799999999999999999999999999988764
Q ss_pred CCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhcccc
Q 005040 580 EGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDAN 659 (717)
Q Consensus 580 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (717)
.... ......+++.|+|||...+..++.++|+||+|+++|||++|+.||.............+... . .+.
T Consensus 158 ~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~---~-----~~~ 227 (267)
T cd08228 158 SKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQC---D-----YPP 227 (267)
T ss_pred chhH--HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcC---C-----CCC
Confidence 3221 11234578899999999888899999999999999999999999854222111111111110 0 000
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhH
Q 005040 660 LVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIK 706 (717)
Q Consensus 660 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~ 706 (717)
. ....++..+.+++.+||+.+|++||++.++++.+++++
T Consensus 228 ~--------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 228 L--------PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred C--------ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 0 01234466889999999999999999999999999864
No 83
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=7e-38 Score=321.83 Aligned_cols=270 Identities=27% Similarity=0.430 Sum_probs=206.0
Q ss_pred ccCCccccccccccEEEEEEEe-----cCCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeec--CCeeE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTL-----SDGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSN--LDFKA 499 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~--~~~~~ 499 (717)
.+|++.+.||+|+||.||+|.. .+++.||+|.+........+.+.+|++++++++||||+++++++.. ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 5788899999999999999974 2578899999876655566788999999999999999999998643 34678
Q ss_pred EEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccC
Q 005040 500 LVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLG 579 (717)
Q Consensus 500 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 579 (717)
+||||+++|+|.+++......+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++....
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH----~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLG----SKRYVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred EEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH----HCCceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 999999999999999876666899999999999999999999 6789999999999999999999999999998764
Q ss_pred CCCCcee-eeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCC--chhhhc
Q 005040 580 EGEDSVI-QTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPH--RLTEVV 656 (717)
Q Consensus 580 ~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 656 (717)
....... .....++..|+|||+..+..++.++||||||+++|||++|..|+..... ...+........ ......
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05081 160 QDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPA---EFMRMMGNDKQGQMIVYHLI 236 (284)
T ss_pred CCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcch---hhhhhcccccccccchHHHH
Confidence 4322211 1112234569999999888999999999999999999999877543211 011100110000 000000
Q ss_pred cccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 005040 657 DANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKI 705 (717)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~ 705 (717)
+ ........+....++.++.+++.+||+.+|++|||+.|+++.|+++
T Consensus 237 ~--~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 237 E--LLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred H--HHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 0 0000011122234566799999999999999999999999999876
No 84
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=5e-38 Score=328.85 Aligned_cols=242 Identities=24% Similarity=0.286 Sum_probs=196.2
Q ss_pred ccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCCC
Q 005040 433 NLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPNG 508 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 508 (717)
+.||+|+||.||++... +++.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 36899999999999865 78999999997653 234466788999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceeee
Q 005040 509 SLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQT 588 (717)
Q Consensus 509 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~ 588 (717)
+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....... ....
T Consensus 81 ~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH----~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~--~~~~ 153 (328)
T cd05593 81 ELFFHLSRER-VFSEDRTRFYGAEIVSALDYLH----SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA--ATMK 153 (328)
T ss_pred CHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcc--cccc
Confidence 9999887654 4899999999999999999999 6899999999999999999999999999987542211 1123
Q ss_pred ccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhh
Q 005040 589 MTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFS 668 (717)
Q Consensus 589 ~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (717)
...||+.|+|||++.+..++.++||||+||++|||++|+.||...... .......... ..+
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~-----~~~~~~~~~~------~~~-------- 214 (328)
T cd05593 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFELILMED------IKF-------- 214 (328)
T ss_pred cccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH-----HHHHHhccCC------ccC--------
Confidence 346899999999999999999999999999999999999999652111 1111110000 000
Q ss_pred hhHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 005040 669 DKMDCLFSIMDLALDCCMDTPHKRI-----HMTDAAAK 701 (717)
Q Consensus 669 ~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~ev~~~ 701 (717)
+..++.++.+++.+||+.||++|| ++.|+++.
T Consensus 215 -p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 215 -PRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred -CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 112345678999999999999997 88888753
No 85
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.5e-37 Score=320.29 Aligned_cols=261 Identities=29% Similarity=0.452 Sum_probs=210.5
Q ss_pred ccCCccccccccccEEEEEEEec------CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS------DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKAL 500 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~l 500 (717)
.+|...+.||+|+||.||+|+.. ++..+++|.+........+.+.+|++++++++||||+++++++.+.+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 56888899999999999999742 355689999876655555678899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC
Q 005040 501 VLEFMPNGSLEKWLYSHN---------------YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENM 565 (717)
Q Consensus 501 v~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~ 565 (717)
||||+++++|.+++.... ..+++..+..++.|++.|++||| +++++||||||+||+++.++
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH----~~~i~H~dlkp~Nil~~~~~ 160 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA----SQHFVHRDLATRNCLVGANL 160 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH----hCCeeecccCcceEEEccCC
Confidence 999999999999997532 34789999999999999999999 68899999999999999999
Q ss_pred cEEEeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHH
Q 005040 566 VAHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWV 644 (717)
Q Consensus 566 ~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~ 644 (717)
.++|+|||++................++..|+|||+..+..++.++||||||+++|||+| |+.||......+ ..+..
T Consensus 161 ~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~~~~ 238 (291)
T cd05094 161 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE--VIECI 238 (291)
T ss_pred cEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH
Confidence 999999999976544332222233456788999999998999999999999999999999 999986532211 11111
Q ss_pred HhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHhhc
Q 005040 645 KESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKAKFL 710 (717)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~~~~ 710 (717)
... .... ....++..+.+++.+||+.+|++||++.+|++.|+++.+..+
T Consensus 239 ~~~---~~~~--------------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~~ 287 (291)
T cd05094 239 TQG---RVLE--------------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKATP 287 (291)
T ss_pred hCC---CCCC--------------CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhcC
Confidence 110 0000 011234568899999999999999999999999999976543
No 86
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=7e-38 Score=328.63 Aligned_cols=260 Identities=27% Similarity=0.428 Sum_probs=204.4
Q ss_pred hccCCccccccccccEEEEEEEec------CCCeEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCceeeEeeeeec-CC
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS------DGTNVAIKIFNLQL-ERAFRSFDSECEILRNV-RHRNLLKILGSCSN-LD 496 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~-~~ 496 (717)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++++ +||||+++++++.. ..
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 357899999999999999999642 35789999986443 23345678899999999 89999999998754 45
Q ss_pred eeEEEEEccCCCCHHHHHhhCC----------------------------------------------------------
Q 005040 497 FKALVLEFMPNGSLEKWLYSHN---------------------------------------------------------- 518 (717)
Q Consensus 497 ~~~lv~e~~~~g~L~~~l~~~~---------------------------------------------------------- 518 (717)
..+++|||+++|+|.+++....
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 6789999999999999986421
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceeeeccccCccc
Q 005040 519 --YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQTMTMATIGY 596 (717)
Q Consensus 519 --~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y 596 (717)
..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++|+|||++..+.............++..|
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH----~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y 241 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLA----SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 241 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccc
Confidence 25789999999999999999999 679999999999999999999999999999876433222222334457789
Q ss_pred cCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHH
Q 005040 597 MAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLF 675 (717)
Q Consensus 597 ~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (717)
+|||++.+..++.++|||||||++|||++ |..||......+ .+.......... ..+..++.
T Consensus 242 ~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~~~~~~~~~~-----------------~~~~~~~~ 303 (337)
T cd05054 242 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFCRRLKEGTRM-----------------RAPEYATP 303 (337)
T ss_pred cCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHHHHHhccCCC-----------------CCCccCCH
Confidence 99999999999999999999999999998 999986532211 111111110000 00112345
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHHHHHhHH
Q 005040 676 SIMDLALDCCMDTPHKRIHMTDAAAKLRKIKA 707 (717)
Q Consensus 676 ~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~ 707 (717)
++.+++.+||+.+|++||++.|+++.|+++.+
T Consensus 304 ~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 304 EIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 68899999999999999999999999998764
No 87
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=9e-38 Score=329.62 Aligned_cols=266 Identities=22% Similarity=0.284 Sum_probs=196.7
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecC-----CeeE
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNL-----DFKA 499 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~-----~~~~ 499 (717)
+|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++... ...|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4788899999999999999965 78999999986432 22345678899999999999999999987432 3579
Q ss_pred EEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccC
Q 005040 500 LVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLG 579 (717)
Q Consensus 500 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 579 (717)
+||||+. ++|.+++.... .+++..+..++.|+++||.||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 81 lv~e~~~-~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 81 VVFELME-SDLHQVIKAND-DLTPEHHQFFLYQLLRALKYIH----TANVFHRDLKPKNILANADCKLKICDFGLARVAF 154 (338)
T ss_pred EEEecCC-CCHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeEECCCCcEEEccCccccccc
Confidence 9999995 69999987654 3899999999999999999999 6789999999999999999999999999997653
Q ss_pred CCCC-ceeeeccccCccccCCCccCC--CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCc----h
Q 005040 580 EGED-SVIQTMTMATIGYMAPEYGSE--GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHR----L 652 (717)
Q Consensus 580 ~~~~-~~~~~~~~~t~~y~aPE~~~~--~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~----~ 652 (717)
.... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ......+....... .
T Consensus 155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~--~~~~~~~~~~~~~~~~~~~ 232 (338)
T cd07859 155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV--VHQLDLITDLLGTPSPETI 232 (338)
T ss_pred cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCCh--HHHHHHHHHHhCCCCHHHH
Confidence 2221 112234568999999998765 6789999999999999999999999965321 11111111110000 0
Q ss_pred hhhcccc-------chh-hhhhh-hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 653 TEVVDAN-------LVR-EEQAF-SDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 653 ~~~~~~~-------~~~-~~~~~-~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
..+.... +.. ..... .....++.++.+++.+||+.||++|||++|+++.
T Consensus 233 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 233 SRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0000000 000 00000 0001234567899999999999999999999863
No 88
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.3e-37 Score=314.53 Aligned_cols=252 Identities=25% Similarity=0.374 Sum_probs=203.7
Q ss_pred ccCCccccccccccEEEEEEEecCCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccC
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMP 506 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 506 (717)
++|+..+.||+|+||.||.|..+++..+|+|.+.... .....+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 5788889999999999999998777789999887442 223568889999999999999999999998888999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCcee
Q 005040 507 NGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVI 586 (717)
Q Consensus 507 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~ 586 (717)
+|+|.+++......+++..++.++.|++.||+||| +.+++|+||||+||+++.++.+||+|||.++....... ..
T Consensus 83 ~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~-~~ 157 (256)
T cd05113 83 NGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLE----SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY-TS 157 (256)
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeccccCcceEEEcCCCCEEECCCccceecCCCce-ee
Confidence 99999999876556899999999999999999999 67899999999999999999999999999876543221 11
Q ss_pred eeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhh
Q 005040 587 QTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQ 665 (717)
Q Consensus 587 ~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (717)
.....++..|+|||+..+..++.++||||||+++|||++ |+.||...... .....+......
T Consensus 158 ~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~~~~--------------- 220 (256)
T cd05113 158 SVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS--ETVEKVSQGLRL--------------- 220 (256)
T ss_pred cCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHhcCCCC---------------
Confidence 122345678999999988889999999999999999999 99998653211 111111111000
Q ss_pred hhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 005040 666 AFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLR 703 (717)
Q Consensus 666 ~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~ 703 (717)
......+..+.+++.+||+.+|++||++.++++.|+
T Consensus 221 --~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 221 --YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred --CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 000112456889999999999999999999998763
No 89
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=5.6e-38 Score=321.28 Aligned_cols=256 Identities=24% Similarity=0.422 Sum_probs=202.9
Q ss_pred HhccCCccccccccccEEEEEEEec------CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCe
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTLS------DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDF 497 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~ 497 (717)
..++|+..+.||+|+||.||+|... ++..||+|++.... ......+.+|+.+++.++||||+++++++.+...
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4578999999999999999999753 35679999886432 2334568899999999999999999999999999
Q ss_pred eEEEEEccCCCCHHHHHhhCC---------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEE
Q 005040 498 KALVLEFMPNGSLEKWLYSHN---------YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAH 568 (717)
Q Consensus 498 ~~lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~k 568 (717)
.++||||+++|+|.++++... ...++..+..++.|++.||.||| +.+++||||||+||++++++.++
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH----~~~~vH~dlkp~Nil~~~~~~~~ 159 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN----ANKFVHRDLAARNCMVAEDFTVK 159 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCcchheEEEcCCCCEE
Confidence 999999999999999997532 23578889999999999999999 67899999999999999999999
Q ss_pred EeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhh
Q 005040 569 VSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKES 647 (717)
Q Consensus 569 l~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~ 647 (717)
|+|||++................++..|+|||++.++.++.++||||||+++|||++ |..||..... ....+++...
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~--~~~~~~~~~~ 237 (277)
T cd05062 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN--EQVLRFVMEG 237 (277)
T ss_pred ECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHcC
Confidence 999999876543322222222345788999999998899999999999999999999 7888865321 1111111110
Q ss_pred CCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 005040 648 LPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLR 703 (717)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~ 703 (717)
. .. .....++..+.+++.+|++.+|++|||+.|+++.|+
T Consensus 238 ---~--------~~------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 238 ---G--------LL------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred ---C--------cC------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 0 00 001123456889999999999999999999999886
No 90
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=7.3e-38 Score=334.72 Aligned_cols=253 Identities=22% Similarity=0.303 Sum_probs=197.7
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEE
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLE 503 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 503 (717)
.|+.++.||+|+||+||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5788899999999999999865 78899999997643 3345678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 504 FMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 504 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
|+++|+|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++++||+|||++........
T Consensus 82 ~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~~LH----~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~ 156 (381)
T cd05626 82 YIPGGDMMSLLIRME-VFPEVLARFYIAELTLAIESVH----KMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHN 156 (381)
T ss_pred cCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccc
Confidence 999999999998654 3788999999999999999999 68999999999999999999999999999754311000
Q ss_pred c---------------------------------------------eeeeccccCccccCCCccCCCCcCcccchhhHHH
Q 005040 584 S---------------------------------------------VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 618 (717)
Q Consensus 584 ~---------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~ 618 (717)
. .......||+.|+|||++.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~ 236 (381)
T cd05626 157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGV 236 (381)
T ss_pred cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhh
Confidence 0 0012346899999999998888999999999999
Q ss_pred HHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhh--ccCCCCCCCCCHH
Q 005040 619 LLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALD--CCMDTPHKRIHMT 696 (717)
Q Consensus 619 il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~--cl~~~P~~Rpt~~ 696 (717)
++|||++|+.||......+. ...... .... + ..+....++.++.+++.+ |+..+|..||++.
T Consensus 237 il~elltG~~Pf~~~~~~~~-~~~i~~--~~~~--------~-----~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~ 300 (381)
T cd05626 237 ILFEMLVGQPPFLAPTPTET-QLKVIN--WENT--------L-----HIPPQVKLSPEAVDLITKLCCSAEERLGRNGAD 300 (381)
T ss_pred HHHHHHhCCCCCcCCCHHHH-HHHHHc--cccc--------c-----CCCCCCCCCHHHHHHHHHHccCcccccCCCCHH
Confidence 99999999999975322111 010000 0000 0 011111234567788887 5566677799999
Q ss_pred HHHHH
Q 005040 697 DAAAK 701 (717)
Q Consensus 697 ev~~~ 701 (717)
|+++.
T Consensus 301 ~~l~h 305 (381)
T cd05626 301 DIKAH 305 (381)
T ss_pred HHhcC
Confidence 99864
No 91
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=6.9e-38 Score=317.63 Aligned_cols=254 Identities=28% Similarity=0.440 Sum_probs=205.9
Q ss_pred hccCCccccccccccEEEEEEEecCCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEcc
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFM 505 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 505 (717)
.++|++.+.||+|+||.||+|...+++.||+|.++... ...+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence 46788999999999999999998778889999987543 22456888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 506 PNGSLEKWLYSHN-YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 506 ~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
++++|.+++.... ..+++..+..++.|++.|+.||| +.+|+||||||+||++++++.++|+|||++.........
T Consensus 84 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 159 (261)
T cd05068 84 KYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLE----AQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYE 159 (261)
T ss_pred cCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCccc
Confidence 9999999997643 55899999999999999999999 678999999999999999999999999999876532211
Q ss_pred eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchhh
Q 005040 585 VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVRE 663 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (717)
.......+..|+|||+..+..++.++||||||+++|||++ |+.||...... .....+.....
T Consensus 160 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~-------------- 222 (261)
T cd05068 160 -AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA--EVLQQVDQGYR-------------- 222 (261)
T ss_pred -ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHcCCC--------------
Confidence 1111223467999999998899999999999999999999 99998653211 11111111000
Q ss_pred hhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 005040 664 EQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRK 704 (717)
Q Consensus 664 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~ 704 (717)
.+....++..+.+++.+|++.+|++||++.++++.|+.
T Consensus 223 ---~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 223 ---MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred ---CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 00111344668899999999999999999999999985
No 92
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=7.4e-38 Score=331.42 Aligned_cols=248 Identities=26% Similarity=0.352 Sum_probs=194.0
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
.+|+..+.||+|+||.||+|+.. +++.||+|++.... ......+.+|+++++.++|+||+++++++.+.+..++||||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 46677889999999999999875 78999999986543 33446788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
+++|+|.+. ...++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 154 ~~~~~L~~~-----~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~- 223 (353)
T PLN00034 154 MDGGSLEGT-----HIADEQFLADVARQILSGIAYLH----RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD- 223 (353)
T ss_pred CCCCccccc-----ccCCHHHHHHHHHHHHHHHHHHH----HCCEeecCCCHHHEEEcCCCCEEEcccccceecccccc-
Confidence 999998653 22567788899999999999999 67899999999999999999999999999987643221
Q ss_pred eeeeccccCccccCCCccCC-----CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhcccc
Q 005040 585 VIQTMTMATIGYMAPEYGSE-----GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDAN 659 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~-----~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (717)
......||..|+|||++.. ...+.++|||||||++|||++|+.||......+ ............
T Consensus 224 -~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~--~~~~~~~~~~~~-------- 292 (353)
T PLN00034 224 -PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD--WASLMCAICMSQ-------- 292 (353)
T ss_pred -cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc--HHHHHHHHhccC--------
Confidence 1233468999999998643 334578999999999999999999997422111 111111000000
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 660 LVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 660 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
.......++.++.+++.+||+.||++||++.|+++.
T Consensus 293 ------~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 293 ------PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred ------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000112345668899999999999999999999874
No 93
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=2.1e-38 Score=336.01 Aligned_cols=252 Identities=24% Similarity=0.345 Sum_probs=204.7
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 46889999999999999999976 78999999997653 234467888999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH----~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 81 EYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVH----KLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred cCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccC
Confidence 999999999999876 45899999999999999999999 6899999999999999999999999999998764432
Q ss_pred ---------------------------CceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCcccc
Q 005040 583 ---------------------------DSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFT 635 (717)
Q Consensus 583 ---------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~ 635 (717)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~ 235 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL 235 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH
Confidence 00112334689999999999999999999999999999999999999976321
Q ss_pred CcchHHHHHHhh-CCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCC-HHHHHHH
Q 005040 636 GEMSLRRWVKES-LPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIH-MTDAAAK 701 (717)
Q Consensus 636 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt-~~ev~~~ 701 (717)
. ..+.... .... + ..+....++.++.+++.+|+. ||++||+ ++|+++.
T Consensus 236 ~----~~~~~i~~~~~~--------~-----~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 236 Q----ETYNKIINWKES--------L-----RFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred H----HHHHHHhccCCc--------c-----cCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 1 1111000 0000 0 001111245668899999997 9999999 9999874
No 94
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.1e-37 Score=319.44 Aligned_cols=260 Identities=24% Similarity=0.397 Sum_probs=207.4
Q ss_pred hccCCccccccccccEEEEEEEec-CCC----eEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGT----NVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKA 499 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~ 499 (717)
..+|+..+.||+|+||+||+|.+. +++ .||+|++.... ....+.+.+|+.+++.++||||+++++++... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcE
Confidence 367889999999999999999853 444 48999886443 33446788899999999999999999998754 468
Q ss_pred EEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccC
Q 005040 500 LVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLG 579 (717)
Q Consensus 500 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 579 (717)
+++||+++|+|.++++.....+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||+++...
T Consensus 85 l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH----~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~ 160 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLE----EVRLVHRDLAARNVLVKSPNHVKITDFGLARLLD 160 (279)
T ss_pred EEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccccccceEEEcCCCcEEECCCCceeecc
Confidence 999999999999999876666899999999999999999999 6889999999999999999999999999998764
Q ss_pred CCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccc
Q 005040 580 EGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDA 658 (717)
Q Consensus 580 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (717)
............++..|+|||...+..++.++||||||+++|||++ |..||..... .....++......
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~~~~~~~~-------- 230 (279)
T cd05109 161 IDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA--REIPDLLEKGERL-------- 230 (279)
T ss_pred cccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHCCCcC--------
Confidence 3322222222335678999999988899999999999999999998 8899865321 1222222211000
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHhh
Q 005040 659 NLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKAKF 709 (717)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~~~ 709 (717)
+....++.++.+++.+||..||++||++.++++.|+.+.+..
T Consensus 231 ---------~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 231 ---------PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred ---------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 011234566889999999999999999999999999886544
No 95
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=9.8e-38 Score=320.53 Aligned_cols=255 Identities=26% Similarity=0.448 Sum_probs=203.8
Q ss_pred ccCCccccccccccEEEEEEEe-----cCCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTL-----SDGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKAL 500 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~l 500 (717)
.+|+..+.||+|+||.||+|.. .++..||+|.+.... .+....+.+|+++++.++||||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4678889999999999999984 256789999987433 3344678889999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhhC----------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCC
Q 005040 501 VLEFMPNGSLEKWLYSH----------------NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDEN 564 (717)
Q Consensus 501 v~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~ 564 (717)
||||+++++|.+++... ...+++.++..++.|++.||+||| +.+++||||||+||+++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH----~~~i~H~dlkp~nili~~~ 160 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS----SHFFVHKDLAARNILIGEQ 160 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH----hcCeehhccccceEEEcCC
Confidence 99999999999998632 124788899999999999999999 6789999999999999999
Q ss_pred CcEEEeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHH
Q 005040 565 MVAHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRW 643 (717)
Q Consensus 565 ~~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~ 643 (717)
+.+||+|||++................++..|+|||+..+..++.++||||||+++|||++ |..||.+... ......
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~--~~~~~~ 238 (283)
T cd05090 161 LHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN--QEVIEM 238 (283)
T ss_pred CcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHHHH
Confidence 9999999999987644332222233445778999999988889999999999999999998 8889865311 111111
Q ss_pred HHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 005040 644 VKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRK 704 (717)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~ 704 (717)
+..... .+....++.++.+++.+|++.||++||++.++.+.|.+
T Consensus 239 ~~~~~~-----------------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 239 VRKRQL-----------------LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHcCCc-----------------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 111100 00112345668899999999999999999999998875
No 96
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=2.6e-38 Score=332.08 Aligned_cols=252 Identities=21% Similarity=0.318 Sum_probs=202.8
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
++|++.+.||+|+||+||+|... +++.||+|+++... .+..+.+.+|+.+++.++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 36888999999999999999875 78999999998653 234456788999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
||+++|+|.+++......+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++..+....
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH----~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVH----QMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANK 156 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH----HCCeEcccCchHheEECCCCCEEeccCCCCeECCCCC
Confidence 999999999999887566899999999999999999999 6889999999999999999999999999998764332
Q ss_pred CceeeeccccCccccCCCccC------CCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhc
Q 005040 583 DSVIQTMTMATIGYMAPEYGS------EGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVV 656 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~------~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (717)
.. ......||+.|+|||++. ...++.++|||||||++|||++|+.||...... ..........
T Consensus 157 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-----~~~~~i~~~~----- 225 (330)
T cd05601 157 MV-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA-----KTYNNIMNFQ----- 225 (330)
T ss_pred ce-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH-----HHHHHHHcCC-----
Confidence 22 223446899999999876 456789999999999999999999999653211 1111100000
Q ss_pred cccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 657 DANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.. ..++.....+.++.+++..|++ +|++|||+.++++
T Consensus 226 --~~----~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 226 --RF----LKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred --Cc----cCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 00 0011111244568899999998 9999999999875
No 97
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=4.4e-38 Score=335.10 Aligned_cols=252 Identities=23% Similarity=0.351 Sum_probs=200.4
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
++|++.+.||+|+||.||+|+.. +++.||||++.... ......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47889999999999999999975 78999999997643 334456788999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
||+++|+|.+++...+ .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.++|+|||++..+....
T Consensus 81 E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH----~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 155 (364)
T cd05599 81 EYLPGGDMMTLLMKKD-TFTEEETRFYIAETILAIDSIH----KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSH 155 (364)
T ss_pred CCCCCcHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeEeccCCHHHeEECCCCCEEEeecccceeccccc
Confidence 9999999999998754 4899999999999999999999 6789999999999999999999999999987543211
Q ss_pred Cce------------------------------------eeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhC
Q 005040 583 DSV------------------------------------IQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTE 626 (717)
Q Consensus 583 ~~~------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg 626 (717)
... ......||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G 235 (364)
T cd05599 156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235 (364)
T ss_pred cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcC
Confidence 000 01123589999999999999999999999999999999999
Q ss_pred CCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCC---HHHHHH
Q 005040 627 KKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIH---MTDAAA 700 (717)
Q Consensus 627 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt---~~ev~~ 700 (717)
+.||......+ ....+.. .... + ..+....++.++.+++.+|+. +|.+|++ +.|+++
T Consensus 236 ~~Pf~~~~~~~--~~~~i~~-~~~~--------~-----~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 236 YPPFCSDNPQE--TYRKIIN-WKET--------L-----QFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCCCCCCHHH--HHHHHHc-CCCc--------c-----CCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 99997532111 1111100 0000 0 001111234567899999997 9999998 888776
No 98
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=5.5e-38 Score=344.11 Aligned_cols=256 Identities=25% Similarity=0.311 Sum_probs=203.9
Q ss_pred HHHhccCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCC---
Q 005040 423 RRATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLD--- 496 (717)
Q Consensus 423 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~--- 496 (717)
+...++|.+.+.||+|+||+||+|... +++.||||++.... ......+.+|+.++..++|+||+++.+.+...+
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 334579999999999999999999864 79999999986542 344566788999999999999999988764332
Q ss_pred -----eeEEEEEccCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEE
Q 005040 497 -----FKALVLEFMPNGSLEKWLYSH---NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAH 568 (717)
Q Consensus 497 -----~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~k 568 (717)
..++||||+++|+|.+++... ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+|
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH----~~~IiHrDLKP~NILl~~~~~vk 183 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVH----SKHMIHRDIKSANILLCSNGLVK 183 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH----hCCEecCCCCHHHEEEeCCCCEE
Confidence 368999999999999999743 345889999999999999999999 68999999999999999999999
Q ss_pred EeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhC
Q 005040 569 VSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESL 648 (717)
Q Consensus 569 l~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 648 (717)
|+|||+++.+.............||+.|+|||++.+..++.++|||||||++|||++|+.||.... .........
T Consensus 184 L~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~-----~~~~~~~~~ 258 (496)
T PTZ00283 184 LGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN-----MEEVMHKTL 258 (496)
T ss_pred EEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHh
Confidence 999999987643322222334568999999999999999999999999999999999999996531 111111111
Q ss_pred CCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 649 PHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
.... . +.+..++.++.+++.+||+.||.+||++.++++.
T Consensus 259 ~~~~------------~--~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 259 AGRY------------D--PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred cCCC------------C--CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 1000 0 0112345668899999999999999999998763
No 99
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.3e-37 Score=319.73 Aligned_cols=267 Identities=25% Similarity=0.398 Sum_probs=203.8
Q ss_pred CCccccccccccEEEEEEEe-----cCCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecC--CeeEE
Q 005040 429 FNECNLLGTGGFGSVYKGTL-----SDGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNL--DFKAL 500 (717)
Q Consensus 429 ~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~--~~~~l 500 (717)
|+..+.||+|+||+||++.. .+++.||+|++.... ......+.+|++++++++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 37889999999999988653 367889999987543 23456788899999999999999999987653 45789
Q ss_pred EEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCC
Q 005040 501 VLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGE 580 (717)
Q Consensus 501 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 580 (717)
||||+++++|.+++.... +++..+..++.|++.|+.||| +.+|+||||||+||+++.++.++|+|||++.....
T Consensus 86 v~e~~~~~~l~~~~~~~~--l~~~~~~~i~~~l~~~l~~lH----~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 159 (283)
T cd05080 86 IMEYVPLGSLRDYLPKHK--LNLAQLLLFAQQICEGMAYLH----SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 159 (283)
T ss_pred EecCCCCCCHHHHHHHcC--CCHHHHHHHHHHHHHHHHHHH----HCCeeccccChheEEEcCCCcEEEeecccccccCC
Confidence 999999999999998654 899999999999999999999 67899999999999999999999999999987654
Q ss_pred CCCce-eeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhC-CCchhhhccc
Q 005040 581 GEDSV-IQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESL-PHRLTEVVDA 658 (717)
Q Consensus 581 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 658 (717)
..... ......++..|+|||...+..++.++||||||+++|||++|+.|+............+..... .....+..+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (283)
T cd05080 160 GHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLER 239 (283)
T ss_pred cchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhc
Confidence 32211 112234566799999998888999999999999999999999998653221111111100000 0011111111
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhH
Q 005040 659 NLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIK 706 (717)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~ 706 (717)
... .+....++.++.+++.+||+.+|++|||++++++.|+++.
T Consensus 240 ~~~-----~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 240 GMR-----LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred CCC-----CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 110 1112245677999999999999999999999999999875
No 100
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=7.2e-38 Score=323.32 Aligned_cols=260 Identities=26% Similarity=0.454 Sum_probs=207.3
Q ss_pred HHhccCCccccccccccEEEEEEEec------CCCeEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecC
Q 005040 424 RATDEFNECNLLGTGGFGSVYKGTLS------DGTNVAIKIFNLQL-ERAFRSFDSECEILRNV-RHRNLLKILGSCSNL 495 (717)
Q Consensus 424 ~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~ 495 (717)
...++|+..+.||+|+||.||+|... ....+|+|.+.... .+....+.+|+++++++ +||||+++++++...
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 34568899999999999999999864 23679999887543 33446688899999999 899999999999999
Q ss_pred CeeEEEEEccCCCCHHHHHhhC---------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCee
Q 005040 496 DFKALVLEFMPNGSLEKWLYSH---------------NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNIL 560 (717)
Q Consensus 496 ~~~~lv~e~~~~g~L~~~l~~~---------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nil 560 (717)
+..++||||+++|+|.++++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH----~~~ivH~dlkp~Nil 164 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA----SKKCIHRDLAARNVL 164 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH----HCCccccccceeeEE
Confidence 9999999999999999999742 345889999999999999999999 678999999999999
Q ss_pred eCCCCcEEEeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcch
Q 005040 561 LDENMVAHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMS 639 (717)
Q Consensus 561 l~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~ 639 (717)
++.++.+||+|||+++.+.............++..|+|||+..+..++.++|||||||++||+++ |..||...... .
T Consensus 165 ~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~ 242 (293)
T cd05053 165 VTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE--E 242 (293)
T ss_pred EcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH--H
Confidence 99999999999999987654332222222335678999999988899999999999999999998 99998653211 1
Q ss_pred HHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhH
Q 005040 640 LRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIK 706 (717)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~ 706 (717)
..+...... . ......++.++.+++.+|++.+|++|||+.|+++.|+.+.
T Consensus 243 ~~~~~~~~~--~---------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 243 LFKLLKEGY--R---------------MEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHHHHcCC--c---------------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 111111100 0 0011133456889999999999999999999999999874
No 101
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=9.4e-38 Score=315.63 Aligned_cols=251 Identities=27% Similarity=0.398 Sum_probs=202.4
Q ss_pred ccCCccccccccccEEEEEEEecCCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccC
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMP 506 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 506 (717)
.+|++.+.||+|+||.||+|.++++..+|+|++..... ....+.+|+++++.++||||+++++++.+.+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence 46888899999999999999987777899998864322 23467889999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCcee
Q 005040 507 NGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVI 586 (717)
Q Consensus 507 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~ 586 (717)
+++|.+++......+++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||+++........ .
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~-~ 157 (256)
T cd05059 83 NGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLE----SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT-S 157 (256)
T ss_pred CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH----HCCcccccccHhhEEECCCCcEEECCcccceeccccccc-c
Confidence 99999999876556899999999999999999999 678999999999999999999999999998765432211 1
Q ss_pred eeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhh
Q 005040 587 QTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQ 665 (717)
Q Consensus 587 ~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (717)
.....++..|+|||+..+..++.++||||||+++|||++ |+.||...... .....+.....
T Consensus 158 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~~~---------------- 219 (256)
T cd05059 158 SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS--EVVESVSAGYR---------------- 219 (256)
T ss_pred cCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH--HHHHHHHcCCc----------------
Confidence 112223567999999988899999999999999999999 88898653221 11111111000
Q ss_pred hhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 005040 666 AFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKL 702 (717)
Q Consensus 666 ~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L 702 (717)
...+..++.++.+++.+||..+|++|||+.|+++.|
T Consensus 220 -~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 220 -LYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred -CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 001112456789999999999999999999999876
No 102
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.1e-37 Score=325.75 Aligned_cols=241 Identities=24% Similarity=0.314 Sum_probs=193.7
Q ss_pred ccccccccEEEEEEEe----cCCCeEEEEEechhh----HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 433 NLLGTGGFGSVYKGTL----SDGTNVAIKIFNLQL----ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
+.||+|+||.||+++. .+++.||+|+++... ......+.+|+++++.++||||+++++++.+.+..|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6799999999999985 357889999997543 22335677899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
+++|+|.+++...+ .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 155 (323)
T cd05584 82 LSGGELFMHLEREG-IFMEDTACFYLSEISLALEHLH----QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT- 155 (323)
T ss_pred CCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC-
Confidence 99999999998654 3788888899999999999999 68899999999999999999999999999875432221
Q ss_pred eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhh
Q 005040 585 VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREE 664 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (717)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .......... .
T Consensus 156 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~-----~~~~~~~~~~--------~---- 217 (323)
T cd05584 156 -VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK-----KTIDKILKGK--------L---- 217 (323)
T ss_pred -cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH-----HHHHHHHcCC--------C----
Confidence 123346899999999999888999999999999999999999999753211 1111111000 0
Q ss_pred hhhhhhHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 005040 665 QAFSDKMDCLFSIMDLALDCCMDTPHKRI-----HMTDAAA 700 (717)
Q Consensus 665 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~ev~~ 700 (717)
..+..++.++.+++.+|++.||++|| ++.++++
T Consensus 218 ---~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 218 ---NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred ---CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 00112345678999999999999999 7887765
No 103
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.2e-37 Score=331.01 Aligned_cols=201 Identities=25% Similarity=0.373 Sum_probs=175.2
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
++|+..+.||+|+||+||+|... +++.||+|++.... ......+.+|+.++.+++||||+++++++.+....|+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47889999999999999999865 68999999997643 233456788999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
||+++|+|.+++...+ .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH----~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~ 155 (363)
T cd05628 81 EFLPGGDMMTLLMKKD-TLTEEETQFYIAETVLAIDSIH----QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAH 155 (363)
T ss_pred cCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCeEecCCCHHHeEECCCCCEEEeeccCcccccccc
Confidence 9999999999998654 4899999999999999999999 6899999999999999999999999999987653211
Q ss_pred Cc---------------------------------eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCC
Q 005040 583 DS---------------------------------VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKP 629 (717)
Q Consensus 583 ~~---------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p 629 (717)
.. ......+||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P 235 (363)
T cd05628 156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (363)
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence 00 001234689999999999999999999999999999999999999
Q ss_pred CCc
Q 005040 630 TDE 632 (717)
Q Consensus 630 ~~~ 632 (717)
|..
T Consensus 236 f~~ 238 (363)
T cd05628 236 FCS 238 (363)
T ss_pred CCC
Confidence 975
No 104
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.4e-37 Score=315.77 Aligned_cols=254 Identities=25% Similarity=0.410 Sum_probs=205.3
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEcc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFM 505 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 505 (717)
.+|+..+.||+|+||.||+|..+ .++.||+|++.... .....+.+|+++++.++||||+++++++...+..++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 56888899999999999999875 68899999987543 23466888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 506 PNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 506 ~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
++++|.+++... ...+++..+..++.|+++||+||| +.+++||||||+||++++++.+||+|||++.........
T Consensus 85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH----~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~ 160 (263)
T cd05052 85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE----KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 160 (263)
T ss_pred CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH----hCCEeecccCcceEEEcCCCcEEeCCCccccccccceee
Confidence 999999999754 345899999999999999999999 678999999999999999999999999999876432211
Q ss_pred eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchhh
Q 005040 585 VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVRE 663 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (717)
.......+..|+|||+..+..++.++||||||+++|||++ |..||...... ........... .
T Consensus 161 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--~~~~~~~~~~~--------~----- 224 (263)
T cd05052 161 -AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKGYR--------M----- 224 (263)
T ss_pred -ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHCCCC--------C-----
Confidence 1112234668999999988899999999999999999998 89998653211 11111111000 0
Q ss_pred hhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 005040 664 EQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKI 705 (717)
Q Consensus 664 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~ 705 (717)
.....++.++.+++.+|++.+|++||++.++++.|+.+
T Consensus 225 ----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 225 ----ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred ----CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 01123456788999999999999999999999999875
No 105
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.3e-37 Score=325.57 Aligned_cols=244 Identities=22% Similarity=0.258 Sum_probs=193.3
Q ss_pred CCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHH---HhcCCCceeeEeeeeecCCeeEEE
Q 005040 429 FNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEIL---RNVRHRNLLKILGSCSNLDFKALV 501 (717)
Q Consensus 429 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l---~~l~hpniv~~~~~~~~~~~~~lv 501 (717)
|++.+.||+|+||.||+|... +++.||||+++... ....+.+..|++++ +.++||||+++++++.+.+..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 567889999999999999875 78999999997553 22345566676655 456799999999999999999999
Q ss_pred EEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCC
Q 005040 502 LEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEG 581 (717)
Q Consensus 502 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 581 (717)
|||+++|+|..++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 81 ~E~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~al~~lH----~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05589 81 MEYAAGGDLMMHIHTD--VFSEPRAVFYAACVVLGLQYLH----ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF 154 (324)
T ss_pred EcCCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH----hCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC
Confidence 9999999999888653 4899999999999999999999 689999999999999999999999999998753222
Q ss_pred CCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccch
Q 005040 582 EDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLV 661 (717)
Q Consensus 582 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (717)
. .......|++.|+|||++.+..++.++|||||||++|||++|+.||...... .......... .
T Consensus 155 ~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~-----~~~~~i~~~~--------~- 218 (324)
T cd05589 155 G--DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE-----EVFDSIVNDE--------V- 218 (324)
T ss_pred C--CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHhCC--------C-
Confidence 1 1123456899999999999999999999999999999999999999753211 1111100000 0
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 005040 662 REEQAFSDKMDCLFSIMDLALDCCMDTPHKRI-----HMTDAAA 700 (717)
Q Consensus 662 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~ev~~ 700 (717)
..+..++..+.+++.+||+.||.+|| ++.++++
T Consensus 219 ------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 219 ------RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred ------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 00112345678999999999999999 4555554
No 106
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=2.4e-37 Score=314.81 Aligned_cols=258 Identities=24% Similarity=0.324 Sum_probs=208.0
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
++|++.+.||+|+||.||+|... +++.+|||.+.... ......+.+|+++++.++||||+++++++.+.+..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 46888899999999999999964 89999999876432 334467889999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccC
Q 005040 503 EFMPNGSLEKWLYS---HNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLG 579 (717)
Q Consensus 503 e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 579 (717)
||+++++|.+++.. ....+++..++.++.|++.|+.||| +.+++|+||||+||+++.++.++++|||++....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH----~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMH----SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEEcCCCCEEECcchhhhccc
Confidence 99999999999874 2345899999999999999999999 6889999999999999999999999999987664
Q ss_pred CCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhcccc
Q 005040 580 EGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDAN 659 (717)
Q Consensus 580 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (717)
.... ......++..|+|||+..+..++.++|+||||+++|||++|..||...... ...+.... .....+.
T Consensus 158 ~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~-----~~~~~~~ 227 (267)
T cd08229 158 SKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYSLCKKI-----EQCDYPP 227 (267)
T ss_pred cCCc--ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch---HHHHhhhh-----hcCCCCC
Confidence 3221 122345888999999998888999999999999999999999998643221 11111110 0000000
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhH
Q 005040 660 LVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIK 706 (717)
Q Consensus 660 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~ 706 (717)
. ....++.++.+++.+||+.+|++|||+.+|++.++++.
T Consensus 228 ~--------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 228 L--------PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred C--------CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 0 01234567889999999999999999999999999874
No 107
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.6e-37 Score=329.58 Aligned_cols=262 Identities=20% Similarity=0.213 Sum_probs=199.0
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
..+|++.+.||+|+||.||+|... +++.||+|... ...+.+|++++++++||||+++++++......++|+|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 367999999999999999999865 78999999643 23467899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
+. ++|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 165 ~~-~~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~ylH----~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~- 237 (391)
T PHA03212 165 YK-TDLYCYLAAKR-NIAICDILAIERSVLRAIQYLH----ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA- 237 (391)
T ss_pred CC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccc-
Confidence 95 69999887654 4889999999999999999999 67999999999999999999999999999975432211
Q ss_pred eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCcccc------CcchHHHHHHhhC------CCch
Q 005040 585 VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFT------GEMSLRRWVKESL------PHRL 652 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~------~~~~~~~~~~~~~------~~~~ 652 (717)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||-.... ....+...+.... +...
T Consensus 238 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~ 317 (391)
T PHA03212 238 NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDA 317 (391)
T ss_pred cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcch
Confidence 122345689999999999999999999999999999999999988643211 1111111111110 0000
Q ss_pred hhhccccc----------hhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 653 TEVVDANL----------VREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 653 ~~~~~~~~----------~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
....+..+ ....+........+.++.+++.+||+.||++|||++|+++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 318 QANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred hHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00000000 0000011112244667899999999999999999999985
No 108
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=9.5e-38 Score=331.81 Aligned_cols=254 Identities=21% Similarity=0.293 Sum_probs=201.5
Q ss_pred HhccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEE
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKAL 500 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~l 500 (717)
..++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+....++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 3578999999999999999999875 78899999997542 2233557789999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCC
Q 005040 501 VLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGE 580 (717)
Q Consensus 501 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 580 (717)
||||+++|+|.+++.... +++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||++.....
T Consensus 121 v~Ey~~gg~L~~~l~~~~--l~~~~~~~~~~qi~~aL~~LH----~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 121 VMEYMPGGDLVNLMSNYD--IPEKWARFYTAEVVLALDAIH----SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred EEcCCCCCcHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 999999999999997643 788889999999999999999 68999999999999999999999999999987643
Q ss_pred CCCceeeeccccCccccCCCccCCC----CcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhc
Q 005040 581 GEDSVIQTMTMATIGYMAPEYGSEG----IVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVV 656 (717)
Q Consensus 581 ~~~~~~~~~~~~t~~y~aPE~~~~~----~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (717)
... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..+....... ..
T Consensus 195 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-~~~~~i~~~~--~~----- 265 (370)
T cd05596 195 NGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-GTYSKIMDHK--NS----- 265 (370)
T ss_pred CCc-ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH-HHHHHHHcCC--Cc-----
Confidence 221 112345689999999987543 4789999999999999999999999753211 0111110000 00
Q ss_pred cccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 005040 657 DANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHK--RIHMTDAAAK 701 (717)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~--Rpt~~ev~~~ 701 (717)
..++....++.++.+++.+|++.+|.+ |+++.|+++.
T Consensus 266 --------~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 266 --------LTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred --------CCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 001111234567889999999999988 9999999754
No 109
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.3e-37 Score=323.29 Aligned_cols=262 Identities=26% Similarity=0.419 Sum_probs=207.8
Q ss_pred ccCCccccccccccEEEEEEEec--------CCCeEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCC
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS--------DGTNVAIKIFNLQL-ERAFRSFDSECEILRNV-RHRNLLKILGSCSNLD 496 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~ 496 (717)
++|.+.+.||+|+||.||+|... ++..+|+|.+.... ......+..|+++++.+ +||||+++++++.+.+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 67899999999999999999752 23569999987543 33456788899999999 7999999999999999
Q ss_pred eeEEEEEccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeee
Q 005040 497 FKALVLEFMPNGSLEKWLYSHN---------------YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILL 561 (717)
Q Consensus 497 ~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill 561 (717)
..++||||+++|+|.+++.... ..+++.++..++.|++.||+||| +.+++||||||+||++
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH----~~gi~H~dlkp~Nill 173 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA----SKKCIHRDLAARNVLV 173 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH----HCCcccccccHHheEE
Confidence 9999999999999999998532 24788999999999999999999 6799999999999999
Q ss_pred CCCCcEEEeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchH
Q 005040 562 DENMVAHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSL 640 (717)
Q Consensus 562 ~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~ 640 (717)
+.++.+||+|||.+................++..|+|||+..+..++.++|||||||++|||++ |..||..... ...
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~--~~~ 251 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--EEL 251 (307)
T ss_pred cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH--HHH
Confidence 9999999999999876543221111122234568999999988889999999999999999998 8888864221 111
Q ss_pred HHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHhhcc
Q 005040 641 RRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKAKFLD 711 (717)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~~~~~ 711 (717)
......... ...+..++.++.+++.+|+..+|++||++.++++.|.++.+...+
T Consensus 252 ~~~~~~~~~-----------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~~~ 305 (307)
T cd05098 252 FKLLKEGHR-----------------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALTSN 305 (307)
T ss_pred HHHHHcCCC-----------------CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHhhc
Confidence 111111000 011123456788999999999999999999999999999876544
No 110
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=3.4e-37 Score=317.62 Aligned_cols=257 Identities=28% Similarity=0.424 Sum_probs=205.0
Q ss_pred cCCccccccccccEEEEEEEec------CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEE
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS------DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKAL 500 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~l 500 (717)
+|++.+.||+|+||.||+|... ....+|+|.+.... ....+.+.+|+.+++.++||||+++++.+...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4778899999999999999853 23568999886543 3344678899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhhCC-----------------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCC
Q 005040 501 VLEFMPNGSLEKWLYSHN-----------------------YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPT 557 (717)
Q Consensus 501 v~e~~~~g~L~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~ 557 (717)
|+||+.+|+|.+++.... ..+++..+..++.|++.||.||| +.+++||||||+
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH----~~~ivH~dikp~ 156 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA----EMKLVHRDLAAR 156 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH----HCCeehhhhhhh
Confidence 999999999999986421 24788999999999999999999 678999999999
Q ss_pred CeeeCCCCcEEEeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccC
Q 005040 558 NILLDENMVAHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTG 636 (717)
Q Consensus 558 Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~ 636 (717)
||++++++.+||+|||+++...............++..|+|||+..+..++.++||||||+++|||++ |+.||.+....
T Consensus 157 nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 236 (290)
T cd05045 157 NVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE 236 (290)
T ss_pred eEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 99999999999999999986543322222233345778999999888889999999999999999999 99998653211
Q ss_pred cchHHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHH
Q 005040 637 EMSLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKA 707 (717)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~ 707 (717)
.+..+..... .. .....++.++.+++.+|++.+|++||+++++++.|+++..
T Consensus 237 --~~~~~~~~~~------------~~-----~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 237 --RLFNLLKTGY------------RM-----ERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred --HHHHHHhCCC------------CC-----CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 1122211110 00 0112344668899999999999999999999999998754
No 111
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=7.9e-38 Score=327.38 Aligned_cols=243 Identities=22% Similarity=0.257 Sum_probs=195.0
Q ss_pred ccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCCC
Q 005040 433 NLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPNG 508 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 508 (717)
+.||+|+||.||++... +++.||+|++.... ......+..|+++++.++||||+++.+++.+.+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 36899999999999865 78999999997653 233456778999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceeee
Q 005040 509 SLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQT 588 (717)
Q Consensus 509 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~ 588 (717)
+|..++.... .+++..+..++.|++.||.|||+ ..+|+||||||+||+++.++.+||+|||++........ ...
T Consensus 81 ~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~---~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~--~~~ 154 (325)
T cd05594 81 ELFFHLSRER-VFSEDRARFYGAEIVSALDYLHS---EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMK 154 (325)
T ss_pred cHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh---cCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc--ccc
Confidence 9999887654 48999999999999999999993 26899999999999999999999999999875432211 122
Q ss_pred ccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhh
Q 005040 589 MTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFS 668 (717)
Q Consensus 589 ~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (717)
...||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.. .. ..+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~--~~~~~i~~---~~------~~~-------- 215 (325)
T cd05594 155 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELILM---EE------IRF-------- 215 (325)
T ss_pred cccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH--HHHHHHhc---CC------CCC--------
Confidence 346899999999999999999999999999999999999999652211 11111100 00 000
Q ss_pred hhHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 005040 669 DKMDCLFSIMDLALDCCMDTPHKRI-----HMTDAAAK 701 (717)
Q Consensus 669 ~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~ev~~~ 701 (717)
+..++.++.+++.+||+.||++|+ ++.++++.
T Consensus 216 -p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 216 -PRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred -CCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 112345678999999999999997 88888753
No 112
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.9e-37 Score=323.11 Aligned_cols=266 Identities=24% Similarity=0.426 Sum_probs=209.9
Q ss_pred hccCCccccccccccEEEEEEEec--------CCCeEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecC
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS--------DGTNVAIKIFNLQL-ERAFRSFDSECEILRNV-RHRNLLKILGSCSNL 495 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~ 495 (717)
.++|.+.+.||+|+||.||+|+.. ....+|+|.+.... ......+.+|+++++++ +||||+++++++.+.
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 368889999999999999999742 34568999887543 33456788899999999 699999999999998
Q ss_pred CeeEEEEEccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCee
Q 005040 496 DFKALVLEFMPNGSLEKWLYSHN---------------YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNIL 560 (717)
Q Consensus 496 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nil 560 (717)
+..++||||+++|+|.+++.... ..+++.++..++.|++.||.||| +.+++||||||+||+
T Consensus 91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH----~~gi~H~dlkp~Nil 166 (314)
T cd05099 91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE----SRRCIHRDLAARNVL 166 (314)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH----HCCeeeccccceeEE
Confidence 99999999999999999997532 34788999999999999999999 679999999999999
Q ss_pred eCCCCcEEEeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcch
Q 005040 561 LDENMVAHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMS 639 (717)
Q Consensus 561 l~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~ 639 (717)
++.++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||...... .
T Consensus 167 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~--~ 244 (314)
T cd05099 167 VTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE--E 244 (314)
T ss_pred EcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH--H
Confidence 99999999999999986643222111122234567999999988899999999999999999999 88888653211 1
Q ss_pred HHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHhhccchh
Q 005040 640 LRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKAKFLDDVA 714 (717)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~~~~~~~~ 714 (717)
......... . ......++.++.+++.+|++.+|++||++.|+++.|.++.....++.+
T Consensus 245 ~~~~~~~~~--~---------------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~~~~ 302 (314)
T cd05099 245 LFKLLREGH--R---------------MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVSEEYL 302 (314)
T ss_pred HHHHHHcCC--C---------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHhcCCce
Confidence 111111100 0 001123445688999999999999999999999999999876666554
No 113
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.5e-37 Score=318.40 Aligned_cols=255 Identities=27% Similarity=0.432 Sum_probs=204.8
Q ss_pred hccCCccccccccccEEEEEEEec------CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS------DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKA 499 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~ 499 (717)
..+|+..+.||+|+||.||++... ++..+|+|.+..........+.+|+++++.++||||+++++++.+....+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL 83 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence 356788899999999999999632 45679999887665556678999999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHhhCC--------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC
Q 005040 500 LVLEFMPNGSLEKWLYSHN--------------YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENM 565 (717)
Q Consensus 500 lv~e~~~~g~L~~~l~~~~--------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~ 565 (717)
+||||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||++++++
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH----~~~i~H~dlkp~nil~~~~~ 159 (280)
T cd05092 84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA----SLHFVHRDLATRNCLVGQGL 159 (280)
T ss_pred EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH----HCCeecccccHhhEEEcCCC
Confidence 9999999999999998543 24789999999999999999999 67899999999999999999
Q ss_pred cEEEeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHH
Q 005040 566 VAHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWV 644 (717)
Q Consensus 566 ~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~ 644 (717)
.+||+|||++................+++.|+|||+..+..++.++|||||||++|||++ |+.||...... ......
T Consensus 160 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~ 237 (280)
T cd05092 160 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT--EAIECI 237 (280)
T ss_pred CEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH--HHHHHH
Confidence 999999999876543322222223345788999999998899999999999999999998 89998653221 111111
Q ss_pred HhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 005040 645 KESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLR 703 (717)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~ 703 (717)
....+ ......++..+.+++.+||+.||++||++.|+.+.|+
T Consensus 238 ~~~~~-----------------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 238 TQGRE-----------------LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HcCcc-----------------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 10000 0011134456889999999999999999999999886
No 114
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1e-37 Score=333.58 Aligned_cols=253 Identities=23% Similarity=0.328 Sum_probs=197.9
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+....|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 47889999999999999999865 78999999986543 234466888999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+....
T Consensus 81 E~~~gg~L~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH----~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~ 155 (377)
T cd05629 81 EFLPGGDLMTMLIKYD-TFSEDVTRFYMAECVLAIEAVH----KLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQH 155 (377)
T ss_pred eCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 9999999999998654 4788999999999999999999 6899999999999999999999999999986432110
Q ss_pred Cc---------------------------------------------eeeeccccCccccCCCccCCCCcCcccchhhHH
Q 005040 583 DS---------------------------------------------VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYG 617 (717)
Q Consensus 583 ~~---------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G 617 (717)
.. .......||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 235 (377)
T cd05629 156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG 235 (377)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence 00 000124689999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCC---CC
Q 005040 618 VLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKR---IH 694 (717)
Q Consensus 618 ~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R---pt 694 (717)
|++|||++|+.||...... ..+..... ..... .++....++.++.+++.+|+. +|.+| ++
T Consensus 236 vil~elltG~~Pf~~~~~~-~~~~~i~~--~~~~~-------------~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~ 298 (377)
T cd05629 236 AIMFECLIGWPPFCSENSH-ETYRKIIN--WRETL-------------YFPDDIHLSVEAEDLIRRLIT-NAENRLGRGG 298 (377)
T ss_pred hhhhhhhcCCCCCCCCCHH-HHHHHHHc--cCCcc-------------CCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCC
Confidence 9999999999999653221 11111100 00000 011111234567899999997 77765 59
Q ss_pred HHHHHHH
Q 005040 695 MTDAAAK 701 (717)
Q Consensus 695 ~~ev~~~ 701 (717)
+.|+++.
T Consensus 299 ~~~~l~h 305 (377)
T cd05629 299 AHEIKSH 305 (377)
T ss_pred HHHHhcC
Confidence 9888764
No 115
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.8e-37 Score=330.57 Aligned_cols=261 Identities=23% Similarity=0.375 Sum_probs=205.3
Q ss_pred HHhccCCccccccccccEEEEEEEec------CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcC-CCceeeEeeeeecC
Q 005040 424 RATDEFNECNLLGTGGFGSVYKGTLS------DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVR-HRNLLKILGSCSNL 495 (717)
Q Consensus 424 ~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-hpniv~~~~~~~~~ 495 (717)
...++|.+.+.||+|+||.||+|.+. .+..||+|+++... ....+.+.+|++++.++. ||||+++++++...
T Consensus 34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~ 113 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG 113 (401)
T ss_pred ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC
Confidence 34467888999999999999999863 34679999997543 333457889999999997 99999999999999
Q ss_pred CeeEEEEEccCCCCHHHHHhhCC---------------------------------------------------------
Q 005040 496 DFKALVLEFMPNGSLEKWLYSHN--------------------------------------------------------- 518 (717)
Q Consensus 496 ~~~~lv~e~~~~g~L~~~l~~~~--------------------------------------------------------- 518 (717)
+..++||||+++|+|.++++...
T Consensus 114 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (401)
T cd05107 114 GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQ 193 (401)
T ss_pred CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchh
Confidence 99999999999999999997431
Q ss_pred ----------------------------------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCC
Q 005040 519 ----------------------------------------YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTN 558 (717)
Q Consensus 519 ----------------------------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~N 558 (717)
..+++..+..++.|++.||.||| +.+++||||||+|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH----~~~ivHrdlkp~N 269 (401)
T cd05107 194 DMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLA----SKNCVHRDLAARN 269 (401)
T ss_pred cchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh----cCCcCcccCCcce
Confidence 13567788899999999999999 6789999999999
Q ss_pred eeeCCCCcEEEeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCc
Q 005040 559 ILLDENMVAHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGE 637 (717)
Q Consensus 559 ill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~ 637 (717)
|+++.++.+||+|||+++.+.............++..|+|||++.+..++.++||||||+++|||++ |+.||......+
T Consensus 270 iLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~ 349 (401)
T cd05107 270 VLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE 349 (401)
T ss_pred EEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH
Confidence 9999999999999999986543222111223356788999999988889999999999999999998 888986532111
Q ss_pred chHHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhH
Q 005040 638 MSLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIK 706 (717)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~ 706 (717)
.....+... .. ...+..++.++.+++.+||..+|++||+++|+++.|+++.
T Consensus 350 -~~~~~~~~~------------~~-----~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 350 -QFYNAIKRG------------YR-----MAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred -HHHHHHHcC------------CC-----CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 111111100 00 0011134567889999999999999999999999999763
No 116
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.3e-37 Score=333.19 Aligned_cols=251 Identities=22% Similarity=0.311 Sum_probs=195.9
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEE
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLE 503 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 503 (717)
.|+.++.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5888999999999999999865 78899999997543 3345678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 504 FMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 504 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
|+++|+|.+++.+.+ .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||++........
T Consensus 82 ~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~al~~lH----~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~ 156 (382)
T cd05625 82 YIPGGDMMSLLIRMG-IFPEDLARFYIAELTCAVESVH----KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (382)
T ss_pred CCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEECCCCCEEEeECCCCcccccccc
Confidence 999999999998654 4788899999999999999999 67899999999999999999999999999753211000
Q ss_pred ---------------------------------------------ceeeeccccCccccCCCccCCCCcCcccchhhHHH
Q 005040 584 ---------------------------------------------SVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGV 618 (717)
Q Consensus 584 ---------------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~ 618 (717)
........||+.|+|||++.+..++.++||||+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGv 236 (382)
T cd05625 157 SKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 236 (382)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechH
Confidence 00011236899999999999999999999999999
Q ss_pred HHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCC---H
Q 005040 619 LLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIH---M 695 (717)
Q Consensus 619 il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt---~ 695 (717)
++|||++|+.||......+. ...... .... . ..+.....+.++.+++.+|+ .+|++|++ +
T Consensus 237 il~elltG~~Pf~~~~~~~~-~~~i~~--~~~~--------~-----~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~ 299 (382)
T cd05625 237 ILYEMLVGQPPFLAQTPLET-QMKVIN--WQTS--------L-----HIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGA 299 (382)
T ss_pred HHHHHHhCCCCCCCCCHHHH-HHHHHc--cCCC--------c-----CCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCH
Confidence 99999999999975322111 111000 0000 0 00111123455778888876 49999997 7
Q ss_pred HHHHH
Q 005040 696 TDAAA 700 (717)
Q Consensus 696 ~ev~~ 700 (717)
.|+++
T Consensus 300 ~ei~~ 304 (382)
T cd05625 300 DEIKA 304 (382)
T ss_pred HHHhc
Confidence 77664
No 117
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.4e-37 Score=324.98 Aligned_cols=251 Identities=24% Similarity=0.265 Sum_probs=197.0
Q ss_pred cCCccccccccccEEEEEEEe----cCCCeEEEEEechhh----HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCCee
Q 005040 428 EFNECNLLGTGGFGSVYKGTL----SDGTNVAIKIFNLQL----ERAFRSFDSECEILRNV-RHRNLLKILGSCSNLDFK 498 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~ 498 (717)
+|++.+.||+|+||.||+++. .+++.||+|++.... ....+.+..|+++++.+ +||+|+++++++.+.+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478889999999999999875 268899999997543 22345678899999999 599999999999999999
Q ss_pred EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeecccccc
Q 005040 499 ALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLL 578 (717)
Q Consensus 499 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 578 (717)
++||||+++|+|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH----~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD-NFSEDEVRFYSGEIILALEHLH----KLGIVYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCcEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence 99999999999999997654 3889999999999999999999 678999999999999999999999999999865
Q ss_pred CCCCCceeeeccccCccccCCCccCCC-CcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhcc
Q 005040 579 GEGEDSVIQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVD 657 (717)
Q Consensus 579 ~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (717)
....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||........ .......... .+
T Consensus 156 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-~~~~~~~~~~------~~ 227 (332)
T cd05614 156 LSEEKER-TYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT-QSEVSRRILK------CD 227 (332)
T ss_pred cccCCCc-cccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC-HHHHHHHHhc------CC
Confidence 3322211 2234689999999988765 478999999999999999999999964322111 1111111000 00
Q ss_pred ccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 005040 658 ANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRI-----HMTDAAA 700 (717)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~ev~~ 700 (717)
+.+ +...+..+.+++.+||+.||++|| +++++++
T Consensus 228 ~~~---------~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 228 PPF---------PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred CCC---------CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 000 112345678999999999999999 6777764
No 118
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=4.3e-37 Score=314.87 Aligned_cols=244 Identities=24% Similarity=0.290 Sum_probs=194.0
Q ss_pred ccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCCCCH
Q 005040 435 LGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPNGSL 510 (717)
Q Consensus 435 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L 510 (717)
||+|+||+||++... +++.||+|.+.... ....+.+..|+++++.++||||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999875 78999999987543 22335677899999999999999999999999999999999999999
Q ss_pred HHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceee
Q 005040 511 EKWLYS---HNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQ 587 (717)
Q Consensus 511 ~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 587 (717)
.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.++|+|||++......... .
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~--~ 154 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH----QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK--T 154 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcc--c
Confidence 988753 2345899999999999999999999 689999999999999999999999999999766433221 2
Q ss_pred eccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhh
Q 005040 588 TMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAF 667 (717)
Q Consensus 588 ~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (717)
....||+.|+|||++.+..++.++||||||+++|||++|+.||....... ........... .. .
T Consensus 155 ~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~--------~~-------~ 218 (280)
T cd05608 155 KGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQRILN--------DS-------V 218 (280)
T ss_pred cccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-hHHHHHHhhcc--------cC-------C
Confidence 23468999999999999999999999999999999999999996532111 11111111000 00 0
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 005040 668 SDKMDCLFSIMDLALDCCMDTPHKRI-----HMTDAAA 700 (717)
Q Consensus 668 ~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~ev~~ 700 (717)
..+..++..+.+++.+||+.||++|| +++++++
T Consensus 219 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 219 TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 11123456688999999999999999 6666665
No 119
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.4e-37 Score=320.96 Aligned_cols=262 Identities=25% Similarity=0.424 Sum_probs=208.6
Q ss_pred hccCCccccccccccEEEEEEEec--------CCCeEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecC
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS--------DGTNVAIKIFNLQL-ERAFRSFDSECEILRNV-RHRNLLKILGSCSNL 495 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~ 495 (717)
..+|.+.+.||+|+||.||+|+.. ++..||+|.+.... ....+.+.+|+.+++.+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 468888999999999999999741 34579999886543 34456788999999999 899999999999999
Q ss_pred CeeEEEEEccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCee
Q 005040 496 DFKALVLEFMPNGSLEKWLYSHN---------------YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNIL 560 (717)
Q Consensus 496 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nil 560 (717)
...++||||+++|+|.+++.... ..+++.++..++.|+++||.||| +.+++||||||+||+
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH----~~givH~dlkp~Nil 169 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA----SQKCIHRDLAARNVL 169 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH----HCCeeecccccceEE
Confidence 99999999999999999998532 34788899999999999999999 679999999999999
Q ss_pred eCCCCcEEEeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcch
Q 005040 561 LDENMVAHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMS 639 (717)
Q Consensus 561 l~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~ 639 (717)
++.++.+||+|||+++...............++..|+|||+..+..++.++||||||+++|||++ |..||...... .
T Consensus 170 i~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~ 247 (304)
T cd05101 170 VTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--E 247 (304)
T ss_pred EcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--H
Confidence 99999999999999987654332222223345678999999988889999999999999999998 78887643111 1
Q ss_pred HHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHhhc
Q 005040 640 LRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKAKFL 710 (717)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~~~~ 710 (717)
....+..... ......++.++.+++.+||+.+|++||++.|+++.|+++...-.
T Consensus 248 ~~~~~~~~~~-----------------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~~ 301 (304)
T cd05101 248 LFKLLKEGHR-----------------MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLTT 301 (304)
T ss_pred HHHHHHcCCc-----------------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhhh
Confidence 1111111000 00112345678899999999999999999999999999876543
No 120
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.4e-37 Score=318.32 Aligned_cols=256 Identities=27% Similarity=0.408 Sum_probs=202.6
Q ss_pred HhccCCccccccccccEEEEEEEecC------CCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCe
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTLSD------GTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDF 497 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~ 497 (717)
.+++|.+.+.||+|+||.||+|.+.+ +..||+|.+.... ......+..|+.+++.++||||+++++++.+.+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 35788999999999999999998753 5678999886443 3334568889999999999999999999988889
Q ss_pred eEEEEEccCCCCHHHHHhhCC------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC---cEE
Q 005040 498 KALVLEFMPNGSLEKWLYSHN------YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENM---VAH 568 (717)
Q Consensus 498 ~~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~---~~k 568 (717)
.++||||+++++|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||+++.++ .+|
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivH~dlkp~nil~~~~~~~~~~k 159 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE----ENHFIHRDIAARNCLLTCKGPGRVAK 159 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH----HCCEeecccchheEEEeccCCCcceE
Confidence 999999999999999997543 24889999999999999999999 67899999999999998654 699
Q ss_pred EeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhh
Q 005040 569 VSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKES 647 (717)
Q Consensus 569 l~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~ 647 (717)
|+|||+++................+..|+|||++.+..++.++|||||||++|||++ |+.||...... .....+...
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~--~~~~~~~~~ 237 (277)
T cd05036 160 IADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ--EVMEFVTGG 237 (277)
T ss_pred eccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHcC
Confidence 999999987643222211122234568999999998899999999999999999997 99998753221 111111110
Q ss_pred CCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 005040 648 LPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLR 703 (717)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~ 703 (717)
. . ...+..++..+.+++.+|++.+|++||++.+|++.|.
T Consensus 238 ~--~---------------~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 238 G--R---------------LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred C--c---------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 0 0 0011234566889999999999999999999999886
No 121
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=7.8e-37 Score=311.11 Aligned_cols=258 Identities=24% Similarity=0.336 Sum_probs=208.8
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
++|+..+.||+|+||.||+|... +|+.||+|.++... ....+.+.+|++++++++|+|++++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57889999999999999999976 89999999886422 233567889999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccC
Q 005040 503 EFMPNGSLEKWLYS---HNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLG 579 (717)
Q Consensus 503 e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 579 (717)
||+++|+|.+++.. ....+++..+..++.+++.|+.||| +.+++||||+|+||+++.++.++|+|||++....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh----~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~ 157 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH----SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH----hCCEecCCcChhhEEECCCCcEEEeccceeeecc
Confidence 99999999999864 2345789999999999999999999 6799999999999999999999999999987654
Q ss_pred CCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhcccc
Q 005040 580 EGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDAN 659 (717)
Q Consensus 580 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (717)
..... .....++..|+|||...+..++.++||||||+++|+|++|+.||.... ....+.......... +.
T Consensus 158 ~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~~~~-----~~ 227 (267)
T cd08224 158 SKTTA--AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLYSLCKKIEKCDY-----PP 227 (267)
T ss_pred CCCcc--cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC---ccHHHHHhhhhcCCC-----CC
Confidence 32211 223457889999999988889999999999999999999999985422 122222111100000 00
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhH
Q 005040 660 LVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIK 706 (717)
Q Consensus 660 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~ 706 (717)
.....++..+.+++.+||..+|++|||+.++++.|+++.
T Consensus 228 --------~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 228 --------LPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred --------CChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 001134556889999999999999999999999999875
No 122
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-38 Score=322.13 Aligned_cols=255 Identities=25% Similarity=0.411 Sum_probs=213.4
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEcc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFM 505 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 505 (717)
.+..+.++||-|.||.||.|.|+ -.-.||||.++... -..+.|.+|..+|+.++|||+|+++|+|..+...|+|+|||
T Consensus 267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM 345 (1157)
T KOG4278|consen 267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFM 345 (1157)
T ss_pred hheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecc
Confidence 45567789999999999999997 45569999987553 34578999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 506 PNGSLEKWLYSHN-YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 506 ~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
..|+|.+|+++.. ..++......++.||+.|+.||. .+.++||||.++|.|+.++..||++|||+++++..+. .
T Consensus 346 ~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLE----kknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDT-Y 420 (1157)
T KOG4278|consen 346 CYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLE----KKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDT-Y 420 (1157)
T ss_pred cCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHH----HhhhhhhhhhhhhccccccceEEeeccchhhhhcCCc-e
Confidence 9999999999764 34667778899999999999999 6789999999999999999999999999999886543 2
Q ss_pred eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchhh
Q 005040 585 VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVRE 663 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (717)
.......-++.|.|||-+....++.|+|||+|||+|||+.| |-.||.+... .+ .-++++..+
T Consensus 421 TAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl-----Sq---------VY~LLEkgy--- 483 (1157)
T KOG4278|consen 421 TAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----SQ---------VYGLLEKGY--- 483 (1157)
T ss_pred ecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH-----HH---------HHHHHhccc---
Confidence 23334445888999999999999999999999999999999 7788876321 11 112222222
Q ss_pred hhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhH
Q 005040 664 EQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIK 706 (717)
Q Consensus 664 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~ 706 (717)
.+..++.|++.+++||+.||+++|.+||++.|+-+.++.+.
T Consensus 484 --RM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 484 --RMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred --cccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence 23445689999999999999999999999999999998864
No 123
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=2.4e-37 Score=346.55 Aligned_cols=261 Identities=23% Similarity=0.302 Sum_probs=205.2
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57899999999999999999875 68999999987542 233467889999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhhC----------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeee
Q 005040 503 EFMPNGSLEKWLYSH----------NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDF 572 (717)
Q Consensus 503 e~~~~g~L~~~l~~~----------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 572 (717)
||++||+|.+++... ....++..+..++.|+++||+||| +.+|+||||||+||+++.++.++|+||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH----s~GIIHRDLKPeNILLd~dg~vKLiDF 157 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH----SKGVLHRDLKPDNILLGLFGEVVILDW 157 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH----HCCccccCCchheEEEcCCCCEEEEec
Confidence 999999999998642 123567788899999999999999 678999999999999999999999999
Q ss_pred ccccccCCCCC----------------ceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccC
Q 005040 573 GISKLLGEGED----------------SVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTG 636 (717)
Q Consensus 573 gl~~~~~~~~~----------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~ 636 (717)
|++........ ........||+.|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 158 GLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ 237 (932)
T PRK13184 158 GAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR 237 (932)
T ss_pred CcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 99986621110 00111246899999999999999999999999999999999999999652211
Q ss_pred cchHHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHHhHHh
Q 005040 637 EMSLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRI-HMTDAAAKLRKIKAK 708 (717)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-t~~ev~~~L~~~~~~ 708 (717)
..... ... .++ .......+++..+.+++.+|++.||++|| +++++++.|+...+.
T Consensus 238 ki~~~----~~i-------~~P------~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~ 293 (932)
T PRK13184 238 KISYR----DVI-------LSP------IEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQG 293 (932)
T ss_pred hhhhh----hhc-------cCh------hhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 11000 000 000 00011123456688999999999999996 577788888876543
No 124
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.8e-37 Score=322.96 Aligned_cols=240 Identities=24% Similarity=0.276 Sum_probs=190.5
Q ss_pred ccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCCeeEEEEEccCC
Q 005040 433 NLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNV-RHRNLLKILGSCSNLDFKALVLEFMPN 507 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~ 507 (717)
+.||+|+||.||+|... +++.||+|+++... ....+.+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999975 68889999997653 22334456677777654 899999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceee
Q 005040 508 GSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQ 587 (717)
Q Consensus 508 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 587 (717)
|+|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++....... ...
T Consensus 81 g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH----~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--~~~ 153 (316)
T cd05592 81 GDLMFHIQSSG-RFDEARARFYAAEIICGLQFLH----KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--GKA 153 (316)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--Ccc
Confidence 99999998654 4899999999999999999999 6889999999999999999999999999997643222 122
Q ss_pred eccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhh
Q 005040 588 TMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAF 667 (717)
Q Consensus 588 ~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (717)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.... +.
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~--~~~~~i~~~~---------~~-------- 214 (316)
T cd05592 154 STFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED--ELFDSILNDR---------PH-------- 214 (316)
T ss_pred ccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHcCC---------CC--------
Confidence 3456899999999999889999999999999999999999999753211 1111111000 00
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCCCHH-HHH
Q 005040 668 SDKMDCLFSIMDLALDCCMDTPHKRIHMT-DAA 699 (717)
Q Consensus 668 ~~~~~~~~~l~~li~~cl~~~P~~Rpt~~-ev~ 699 (717)
.+..++.++.+++.+||+.||++||++. +++
T Consensus 215 -~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 215 -FPRWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred -CCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 0112345678999999999999999875 443
No 125
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=3.7e-37 Score=316.27 Aligned_cols=251 Identities=25% Similarity=0.322 Sum_probs=200.2
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEE
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLE 503 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 503 (717)
.|+..+.||+|+||.||++... +++.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 3778899999999999999865 78999999987543 2223457789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 504 FMPNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 504 ~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
|+++|+|.+++... ...+++..+..++.|++.|+.||| +.+++||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLH----RERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE 156 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH----HCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC
Confidence 99999999988754 345899999999999999999999 6789999999999999999999999999998754322
Q ss_pred CceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchh
Q 005040 583 DSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVR 662 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (717)
. .....|++.|+|||++.+..++.++||||+|+++|||++|+.||..... ....... .......
T Consensus 157 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~-~~~~~~~-~~~~~~~----------- 220 (285)
T cd05605 157 T---IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKE-KVKREEV-ERRVKED----------- 220 (285)
T ss_pred c---cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCch-hhHHHHH-HHHhhhc-----------
Confidence 1 1234689999999999888999999999999999999999999975321 1111111 1100000
Q ss_pred hhhhhhhhHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 005040 663 EEQAFSDKMDCLFSIMDLALDCCMDTPHKRI-----HMTDAAAK 701 (717)
Q Consensus 663 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~ev~~~ 701 (717)
.. .....++..+.+++.+||..||++|| ++.++++.
T Consensus 221 -~~--~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 221 -QE--EYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred -cc--ccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 00 01113455688999999999999999 78887553
No 126
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.4e-37 Score=324.07 Aligned_cols=247 Identities=19% Similarity=0.260 Sum_probs=194.4
Q ss_pred ccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCCeeEEEEEccCC
Q 005040 433 NLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNV-RHRNLLKILGSCSNLDFKALVLEFMPN 507 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~ 507 (717)
+.||+|+||.||+|... +++.||+|+++... ....+.+..|..+++.+ +||||+++++++.+....|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 36899999999999875 78899999998653 23345678899999998 799999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceee
Q 005040 508 GSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQ 587 (717)
Q Consensus 508 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 587 (717)
|+|.+++...+ .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++........ ..
T Consensus 81 g~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~--~~ 153 (329)
T cd05588 81 GDLMFHMQRQR-KLPEEHARFYSAEISLALNFLH----ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGD--TT 153 (329)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCHHHeEECCCCCEEECcCccccccccCCC--cc
Confidence 99999887654 4899999999999999999999 68999999999999999999999999999875322111 12
Q ss_pred eccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccC---cchHHHHHHhhCCCchhhhccccchhhh
Q 005040 588 TMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTG---EMSLRRWVKESLPHRLTEVVDANLVREE 664 (717)
Q Consensus 588 ~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (717)
....||+.|+|||++.+..++.++||||+||++|||++|+.||+..... ......+...... ....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~-------~~~~---- 222 (329)
T cd05588 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVIL-------EKQI---- 222 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHH-------cCCC----
Confidence 3346899999999999999999999999999999999999999642111 1111122111110 0000
Q ss_pred hhhhhhHHHHHHHHHHHhhccCCCCCCCCC------HHHHHH
Q 005040 665 QAFSDKMDCLFSIMDLALDCCMDTPHKRIH------MTDAAA 700 (717)
Q Consensus 665 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt------~~ev~~ 700 (717)
. .+..++.++.+++.+|++.||++||+ +.++++
T Consensus 223 -~--~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 223 -R--IPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred -C--CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 0 01123456789999999999999998 556653
No 127
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.8e-37 Score=324.06 Aligned_cols=241 Identities=23% Similarity=0.243 Sum_probs=193.4
Q ss_pred ccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCCeeEEEEEccCC
Q 005040 433 NLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNV-RHRNLLKILGSCSNLDFKALVLEFMPN 507 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~ 507 (717)
+.||+|+||.||+|+.. +++.||+|++.... ....+.+..|.++++.+ +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 36999999999999875 68899999997653 23345677889999876 799999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceee
Q 005040 508 GSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQ 587 (717)
Q Consensus 508 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 587 (717)
|+|..++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++........ ..
T Consensus 81 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~--~~ 153 (321)
T cd05591 81 GDLMFQIQRSR-KFDEPRSRFYAAEVTLALMFLH----RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV--TT 153 (321)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHeEECCCCCEEEeecccceecccCCc--cc
Confidence 99999987654 4889999999999999999999 67899999999999999999999999999875432221 12
Q ss_pred eccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhh
Q 005040 588 TMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAF 667 (717)
Q Consensus 588 ~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (717)
....||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...+.+.. .. .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~--~~~~~i~~---~~--------~------- 213 (321)
T cd05591 154 TTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED--DLFESILH---DD--------V------- 213 (321)
T ss_pred cccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH--HHHHHHHc---CC--------C-------
Confidence 3446899999999999889999999999999999999999999753211 11111110 00 0
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCC-------CHHHHHH
Q 005040 668 SDKMDCLFSIMDLALDCCMDTPHKRI-------HMTDAAA 700 (717)
Q Consensus 668 ~~~~~~~~~l~~li~~cl~~~P~~Rp-------t~~ev~~ 700 (717)
..+..++.++.+++.+|++.||++|| +++++++
T Consensus 214 ~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 214 LYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 00012345678999999999999999 6777764
No 128
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=2.7e-37 Score=318.52 Aligned_cols=263 Identities=24% Similarity=0.319 Sum_probs=195.4
Q ss_pred ccCCccccccccccEEEEEEEec--CCCeEEEEEechhh--HHHHHHHHHHHHHHHhc---CCCceeeEeeeee-----c
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS--DGTNVAIKIFNLQL--ERAFRSFDSECEILRNV---RHRNLLKILGSCS-----N 494 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~hpniv~~~~~~~-----~ 494 (717)
++|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|+.+++.+ +||||+++++++. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 37889999999999999999863 46889999886543 22223456677777766 6999999999874 3
Q ss_pred CCeeEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeec
Q 005040 495 LDFKALVLEFMPNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFG 573 (717)
Q Consensus 495 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 573 (717)
....++||||+. ++|.+++... ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH----~~~iiH~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH----SHRVVHRDLKPQNILVTSSGQIKLADFG 155 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCCHHHEEEcCCCCEEEcccc
Confidence 456899999996 6999999754 344899999999999999999999 6889999999999999999999999999
Q ss_pred cccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhC---CC
Q 005040 574 ISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESL---PH 650 (717)
Q Consensus 574 l~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~---~~ 650 (717)
++....... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.+.... ..+........ +.
T Consensus 156 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~-~~~~~i~~~~~~~~~~ 231 (290)
T cd07862 156 LARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILDVIGLPGEE 231 (290)
T ss_pred ceEeccCCc---ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHH-HHHHHHHHHhCCCChh
Confidence 998664321 223446899999999998889999999999999999999999999763221 11111111110 00
Q ss_pred chhh-------hccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 651 RLTE-------VVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 651 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.+.. .+...-....... ..+.+..+.+++.+|++.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 232 DWPRDVALPRQAFHSKSAQPIEKF--VTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hchhhhcccchhccCCCCCCHHHH--ccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 0000 0000000000000 1134566789999999999999999999985
No 129
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=5.8e-37 Score=313.38 Aligned_cols=247 Identities=23% Similarity=0.311 Sum_probs=194.7
Q ss_pred ccccccEEEEEEEec-CCCeEEEEEechhhH---HHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCCCCH
Q 005040 435 LGTGGFGSVYKGTLS-DGTNVAIKIFNLQLE---RAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPNGSL 510 (717)
Q Consensus 435 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L 510 (717)
||+|+||.||+++.+ +|+.||+|.+..... .....+..|++++++++||||+++++++.+....++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999875 799999999865431 1234456799999999999999999999999999999999999999
Q ss_pred HHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceeeec
Q 005040 511 EKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQTM 589 (717)
Q Consensus 511 ~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~ 589 (717)
.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++|+|||++....... ....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH----~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~---~~~~ 153 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLH----SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK---TITQ 153 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHH----HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc---eeec
Confidence 9888653 335889999999999999999999 6899999999999999999999999999988764322 1233
Q ss_pred cccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhh
Q 005040 590 TMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSD 669 (717)
Q Consensus 590 ~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (717)
..|+..|+|||++.+..++.++||||+||++|||++|+.||...... ............. .... .
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~-~~~~~~~~~~~~~--------~~~~------~ 218 (277)
T cd05607 154 RAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK-VAKEELKRRTLED--------EVKF------E 218 (277)
T ss_pred cCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch-hhHHHHHHHhhcc--------cccc------c
Confidence 46899999999998888999999999999999999999998653221 1111111111100 0000 0
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 005040 670 KMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLR 703 (717)
Q Consensus 670 ~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~ 703 (717)
...++.++.+++.+||+.||++||+++|+++...
T Consensus 219 ~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~ 252 (277)
T cd05607 219 HQNFTEESKDICRLFLAKKPEDRLGSREKNDDPR 252 (277)
T ss_pred cccCCHHHHHHHHHHhccCHhhCCCCccchhhhh
Confidence 0124556889999999999999999987764443
No 130
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=2.5e-37 Score=323.48 Aligned_cols=241 Identities=23% Similarity=0.268 Sum_probs=193.8
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCC-ceeeEeeeeecCCeeEEEE
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHR-NLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hp-niv~~~~~~~~~~~~~lv~ 502 (717)
+|++.+.||+|+||.||+|... +++.||+|++.... ....+.+..|.++++.+.|+ +|+.+++++.+.+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 5788899999999999999875 67889999997653 23446678899999999765 6888999999999999999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
||+++|+|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 81 E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH----~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05587 81 EYVNGGDLMYHIQQVG-KFKEPHAVFYAAEIAIGLFFLH----SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG 155 (324)
T ss_pred cCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC
Confidence 9999999999997654 3789999999999999999999 6799999999999999999999999999987532211
Q ss_pred CceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchh
Q 005040 583 DSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVR 662 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (717)
. ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+... . .
T Consensus 156 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--~~~~~i~~~---~------~---- 218 (324)
T cd05587 156 K--TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED--ELFQSIMEH---N------V---- 218 (324)
T ss_pred C--ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHHcC---C------C----
Confidence 1 123446899999999999999999999999999999999999999753211 111111110 0 0
Q ss_pred hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCH
Q 005040 663 EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHM 695 (717)
Q Consensus 663 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~ 695 (717)
..+...+.++.+++.+|+..||++|+++
T Consensus 219 -----~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 219 -----SYPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred -----CCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 0011234567899999999999999986
No 131
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=6.9e-38 Score=334.86 Aligned_cols=253 Identities=22% Similarity=0.295 Sum_probs=197.7
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
.+|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 36899999999999999999965 68999999987543 233456788999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
||+++|+|.+++...+ .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++..+....
T Consensus 81 E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH----~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 81 DYIPGGDMMSLLIRLG-IFEEDLARFYIAELTCAIESVH----KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred eCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 9999999999998754 4788889999999999999999 6899999999999999999999999999975321000
Q ss_pred C-----------------------------------------ceeeeccccCccccCCCccCCCCcCcccchhhHHHHHH
Q 005040 583 D-----------------------------------------SVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLM 621 (717)
Q Consensus 583 ~-----------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~ 621 (717)
. ........||+.|+|||++.+..++.++|||||||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 0 00011246899999999999999999999999999999
Q ss_pred HHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCC---CHHHH
Q 005040 622 ETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRI---HMTDA 698 (717)
Q Consensus 622 el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp---t~~ev 698 (717)
||++|+.||......+. ...+. ..... . ..+....++.++.+++.+|+ .+|.+|+ ++.|+
T Consensus 236 ell~G~~Pf~~~~~~~~--~~~i~-~~~~~--------~-----~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~el 298 (376)
T cd05598 236 EMLVGQPPFLADTPAET--QLKVI-NWETT--------L-----HIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEI 298 (376)
T ss_pred ehhhCCCCCCCCCHHHH--HHHHh-ccCcc--------c-----cCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHH
Confidence 99999999976322111 00000 00000 0 00111123455778888876 4999999 88888
Q ss_pred HHH
Q 005040 699 AAK 701 (717)
Q Consensus 699 ~~~ 701 (717)
++.
T Consensus 299 l~h 301 (376)
T cd05598 299 KAH 301 (376)
T ss_pred hCC
Confidence 754
No 132
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=7.1e-37 Score=316.69 Aligned_cols=258 Identities=24% Similarity=0.397 Sum_probs=206.0
Q ss_pred hccCCccccccccccEEEEEEEec------CCCeEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCCe
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS------DGTNVAIKIFNLQL-ERAFRSFDSECEILRNV-RHRNLLKILGSCSNLDF 497 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~ 497 (717)
.++|...+.||+|+||.||+|... ++..||+|+++... ....+.+.+|+++++++ +||||+++++++...+.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 467999999999999999999741 35579999887543 33446788999999999 79999999999999999
Q ss_pred eEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeecccc
Q 005040 498 KALVLEFMPNGSLEKWLYSHN-YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISK 576 (717)
Q Consensus 498 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 576 (717)
.++||||+.+|+|.++++... ..+++.++..++.|++.||.||| +.+|+|+||||+||+++.++.++++|||++.
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~ 189 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLA----SKNCIHRDLAARNVLLTHGKIVKICDFGLAR 189 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH----HCCeehhhhccceEEEcCCCeEEECCCcccc
Confidence 999999999999999998543 34899999999999999999999 6789999999999999999999999999998
Q ss_pred ccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhh
Q 005040 577 LLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEV 655 (717)
Q Consensus 577 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (717)
...............++..|+|||.+.+..++.++||||+||++|||++ |..||....... ............
T Consensus 190 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~-~~~~~~~~~~~~----- 263 (302)
T cd05055 190 DIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS-KFYKLIKEGYRM----- 263 (302)
T ss_pred cccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH-HHHHHHHcCCcC-----
Confidence 6644332222223345778999999998899999999999999999998 999986532211 111111111000
Q ss_pred ccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 005040 656 VDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKI 705 (717)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~ 705 (717)
......+.++.+++.+|+..+|++|||+.|+++.|++.
T Consensus 264 ------------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 264 ------------AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred ------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 00012235688999999999999999999999999864
No 133
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.3e-37 Score=319.62 Aligned_cols=255 Identities=24% Similarity=0.406 Sum_probs=203.3
Q ss_pred ccCCccccccccccEEEEEEEec------CCCeEEEEEechhhH-HHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS------DGTNVAIKIFNLQLE-RAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKA 499 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~ 499 (717)
.+|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+....+
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~ 84 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS 84 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence 45777889999999999999863 257899999975442 33466889999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHhhC---------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCC
Q 005040 500 LVLEFMPNGSLEKWLYSH---------------NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDEN 564 (717)
Q Consensus 500 lv~e~~~~g~L~~~l~~~---------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~ 564 (717)
+++||+.+++|.+++... ...+++..+..++.|++.||.|+| +.+|+||||||+||+++++
T Consensus 85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH----~~gi~H~dlkp~Nil~~~~ 160 (283)
T cd05091 85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS----SHHVVHKDLATRNVLVFDK 160 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH----HcCccccccchhheEecCC
Confidence 999999999999998632 134788889999999999999999 6789999999999999999
Q ss_pred CcEEEeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHH
Q 005040 565 MVAHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRW 643 (717)
Q Consensus 565 ~~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~ 643 (717)
+.+||+|||+++...............+++.|+|||.+.++.++.++||||+|+++|||++ |..||.+.... .....
T Consensus 161 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~~~~~ 238 (283)
T cd05091 161 LNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--DVIEM 238 (283)
T ss_pred CceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHH
Confidence 9999999999886643332222233346788999999988889999999999999999998 88887653211 11111
Q ss_pred HHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 005040 644 VKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRK 704 (717)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~ 704 (717)
+... .. .+.+.+++..+.+++.+||+.+|++||+++++++.|+.
T Consensus 239 i~~~---~~--------------~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 239 IRNR---QV--------------LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHcC---Cc--------------CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1110 00 01112456678899999999999999999999999874
No 134
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=3.7e-37 Score=315.75 Aligned_cols=261 Identities=23% Similarity=0.368 Sum_probs=209.8
Q ss_pred HhccCCccccccccccEEEEEEEecC-----CCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeec-CCe
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTLSD-----GTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSN-LDF 497 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~-~~~ 497 (717)
..++|+..+.||+|+||.||+|.+.+ +..||+|++.... ....+.+.+|+.+++.++||||+++++++.. ...
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 35688899999999999999999765 6889999886443 3345678889999999999999999998765 567
Q ss_pred eEEEEEccCCCCHHHHHhhCC-------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEe
Q 005040 498 KALVLEFMPNGSLEKWLYSHN-------YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVS 570 (717)
Q Consensus 498 ~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~ 570 (717)
.++++||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH----~~~i~H~di~p~nil~~~~~~~kl~ 159 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH----KRGVIHKDIAARNCVIDEELQVKIT 159 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH----HCCEeecccCHhhEEEcCCCcEEEC
Confidence 899999999999999997532 45889999999999999999999 6789999999999999999999999
Q ss_pred eeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCC
Q 005040 571 DFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLP 649 (717)
Q Consensus 571 Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 649 (717)
|||+++.+.............++..|+|||+..+..++.++||||||+++||+++ |+.||..... ..+..+......
T Consensus 160 d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~~~ 237 (280)
T cd05043 160 DNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--FEMAAYLKDGYR 237 (280)
T ss_pred CCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--HHHHHHHHcCCC
Confidence 9999987644332222233346778999999988889999999999999999999 9999865321 222222221110
Q ss_pred CchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHh
Q 005040 650 HRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKAK 708 (717)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~~ 708 (717)
......++.++.+++.+||+.||++|||+.++++.|+.+..+
T Consensus 238 -----------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 238 -----------------LAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred -----------------CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 001112345688999999999999999999999999988754
No 135
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.7e-37 Score=323.72 Aligned_cols=237 Identities=24% Similarity=0.280 Sum_probs=191.0
Q ss_pred ccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCCeeEEEEEccCC
Q 005040 433 NLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNV-RHRNLLKILGSCSNLDFKALVLEFMPN 507 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~ 507 (717)
+.||+|+||.||+|+.+ +++.||+|++.... ....+.+..|..++..+ +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36899999999999975 68899999997643 23445677888888877 699999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceee
Q 005040 508 GSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQ 587 (717)
Q Consensus 508 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 587 (717)
|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++........ ..
T Consensus 81 g~L~~~i~~~~-~l~~~~~~~~~~ql~~~L~~lH----~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~--~~ 153 (320)
T cd05590 81 GDLMFHIQKSR-RFDEARARFYAAEITSALMFLH----DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGK--TT 153 (320)
T ss_pred chHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCC--cc
Confidence 99999988654 4889999999999999999999 68899999999999999999999999999875422211 12
Q ss_pred eccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhh
Q 005040 588 TMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAF 667 (717)
Q Consensus 588 ~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (717)
....||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+. ....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~--~~~~~i~---~~~~--------------- 213 (320)
T cd05590 154 STFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED--DLFEAIL---NDEV--------------- 213 (320)
T ss_pred cccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--HHHHHHh---cCCC---------------
Confidence 3346899999999999999999999999999999999999999753211 1111111 0000
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCCCHH
Q 005040 668 SDKMDCLFSIMDLALDCCMDTPHKRIHMT 696 (717)
Q Consensus 668 ~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ 696 (717)
..+...+.++.+++.+|++.||++||++.
T Consensus 214 ~~~~~~~~~~~~li~~~L~~dP~~R~~~~ 242 (320)
T cd05590 214 VYPTWLSQDAVDILKAFMTKNPTMRLGSL 242 (320)
T ss_pred CCCCCCCHHHHHHHHHHcccCHHHCCCCC
Confidence 00112345678999999999999999983
No 136
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=2.8e-37 Score=323.31 Aligned_cols=242 Identities=19% Similarity=0.256 Sum_probs=191.0
Q ss_pred ccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCCeeEEEEEccCC
Q 005040 433 NLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNV-RHRNLLKILGSCSNLDFKALVLEFMPN 507 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~ 507 (717)
+.||+|+||.||+|..+ +++.||+|+++... ......+..|+.++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999975 68899999997653 23345677889988877 799999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceee
Q 005040 508 GSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQ 587 (717)
Q Consensus 508 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 587 (717)
|+|..++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 81 ~~L~~~~~~~~-~l~~~~~~~i~~qi~~~l~~lH----~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~--~~ 153 (329)
T cd05618 81 GDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH----ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TT 153 (329)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC--cc
Confidence 99999887654 4899999999999999999999 67899999999999999999999999999875322111 12
Q ss_pred eccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccC---cchHHHHHHhhCCCchhhhccccchhhh
Q 005040 588 TMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTG---EMSLRRWVKESLPHRLTEVVDANLVREE 664 (717)
Q Consensus 588 ~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (717)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ......+....... ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~-------~~~---- 222 (329)
T cd05618 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE-------KQI---- 222 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc-------CCC----
Confidence 3346899999999999999999999999999999999999999642111 11111111111100 000
Q ss_pred hhhhhhHHHHHHHHHHHhhccCCCCCCCCCH
Q 005040 665 QAFSDKMDCLFSIMDLALDCCMDTPHKRIHM 695 (717)
Q Consensus 665 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~ 695 (717)
..+..++.++.+++.+||+.||++||++
T Consensus 223 ---~~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 223 ---RIPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred ---CCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 0111334567899999999999999984
No 137
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-40 Score=306.18 Aligned_cols=250 Identities=23% Similarity=0.345 Sum_probs=211.6
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEcc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFM 505 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 505 (717)
+-|+++.+||+|.||.||+|.++ .|+.+|+|.+... ...+.+.+|+.++++++.|++|++||.|.....+.+|||||
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYC 110 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYC 110 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhc
Confidence 45677889999999999999976 7999999987654 34578889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCce
Q 005040 506 PNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSV 585 (717)
Q Consensus 506 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 585 (717)
..|+..+.++..++.+++..+..+.+..++||+|||. ..-+|||||+.|||++.+|++||+|||.+..+.. .-.
T Consensus 111 GAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~----~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD--TMA 184 (502)
T KOG0574|consen 111 GAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHD----LKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTD--TMA 184 (502)
T ss_pred CCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHH----HHHHHhhcccccEEEcccchhhhhhccccchhhh--hHH
Confidence 9999999999888889999999999999999999994 5679999999999999999999999999976632 222
Q ss_pred eeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhh
Q 005040 586 IQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQ 665 (717)
Q Consensus 586 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (717)
......||+.|||||++..-.|..++||||+|++..||..|++||.+..+-. .++ .--....+
T Consensus 185 KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR----------------AIF-MIPT~PPP 247 (502)
T KOG0574|consen 185 KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR----------------AIF-MIPTKPPP 247 (502)
T ss_pred hhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc----------------eeE-eccCCCCC
Confidence 3455679999999999999999999999999999999999999997643211 000 00011223
Q ss_pred hhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 666 AFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 666 ~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
.+..++..+.++.++++.|+-+.|++|-|+.++++.
T Consensus 248 TF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 248 TFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred CCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 444555667889999999999999999999988764
No 138
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=5.2e-37 Score=312.70 Aligned_cols=256 Identities=27% Similarity=0.482 Sum_probs=206.1
Q ss_pred ccCCccccccccccEEEEEEEec-CC---CeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DG---TNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALV 501 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv 501 (717)
.+|++.+.||+|+||.||+|... ++ ..||+|++.... ......+..|+.++++++||||+++++++.+.+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 45788899999999999999865 33 369999987542 34456789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCC
Q 005040 502 LEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEG 581 (717)
Q Consensus 502 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 581 (717)
|||+++|+|.+++......+++.++..++.|++.|++||| +.+++|+||||+||+++.++.++++|||++......
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH----~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 84 TEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLS----EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred EecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH----HCCEeecccChheEEEcCCCcEEECCCccccccccC
Confidence 9999999999999876666899999999999999999999 678999999999999999999999999998766433
Q ss_pred CCceeeeccc---cCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhcc
Q 005040 582 EDSVIQTMTM---ATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVD 657 (717)
Q Consensus 582 ~~~~~~~~~~---~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (717)
.......... .+..|+|||+..+..++.++||||||+++||+++ |..||..... .....++....+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~--~~~~~~i~~~~~-------- 229 (269)
T cd05065 160 TSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--QDVINAIEQDYR-------- 229 (269)
T ss_pred ccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH--HHHHHHHHcCCc--------
Confidence 2211111111 2457999999999999999999999999999987 9999865322 122222221110
Q ss_pred ccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 005040 658 ANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKI 705 (717)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~ 705 (717)
.+...+++..+.+++.+||+.+|++||++.+++..|+++
T Consensus 230 ---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 230 ---------LPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ---------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 011124456688999999999999999999999998865
No 139
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-38 Score=325.86 Aligned_cols=257 Identities=26% Similarity=0.416 Sum_probs=212.7
Q ss_pred cCCccccccccccEEEEEEEec--CCC--eEEEEEechhhH-HHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS--DGT--NVAIKIFNLQLE-RAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~--~~~--~vavK~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
+....++||+|.||.|++|.|+ +|+ .||||.++.... ....+|.+|+.+|.+|+|||++++||.+.+ ....|||
T Consensus 111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ 189 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVF 189 (1039)
T ss_pred HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHh
Confidence 3445678999999999999985 344 489999987653 367899999999999999999999999987 5678999
Q ss_pred EccCCCCHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCC
Q 005040 503 EFMPNGSLEKWLYS-HNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEG 581 (717)
Q Consensus 503 e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 581 (717)
|.++.|+|.+.+++ ....+.......++.|||.|+.||. ++++|||||.++|+++-..-.|||+|||+.+-++..
T Consensus 190 ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLe----skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 190 ELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLE----SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGEN 265 (1039)
T ss_pred hhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHh----hhhhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence 99999999999997 4556788889999999999999999 789999999999999999999999999999999876
Q ss_pred CCcee-eeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhcccc
Q 005040 582 EDSVI-QTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDAN 659 (717)
Q Consensus 582 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (717)
+..+. ......+..|.|||.+....++.++|||+|||++|||+| |..||-+.... + +-+.+|.
T Consensus 266 ed~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~--q------------IL~~iD~- 330 (1039)
T KOG0199|consen 266 EDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI--Q------------ILKNIDA- 330 (1039)
T ss_pred CcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH--H------------HHHhccc-
Confidence 65543 233345788999999999999999999999999999999 77888663211 1 1122221
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHh
Q 005040 660 LVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKAK 708 (717)
Q Consensus 660 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~~ 708 (717)
....+.+..|++++++++..||...|++|||+.++.+.+-..+++
T Consensus 331 ----~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l~eaq 375 (1039)
T KOG0199|consen 331 ----GERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAEAQ 375 (1039)
T ss_pred ----cccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHHHhcC
Confidence 122345568999999999999999999999999998766554443
No 140
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=331.07 Aligned_cols=339 Identities=22% Similarity=0.238 Sum_probs=269.2
Q ss_pred CCCCCccccCCCCCcEEECCCCcceecCCcCCCCCCCCCEEEcccccccCccCCcccccccccccCccCCcEEeccCCCC
Q 005040 1 MGTIPNSITNATKLIGLDLGLNSFSGHIPNTFGNLRHLSVLSLMMNNLTTESSSADQWSFLSSLTNCRNLANLALASNPL 80 (717)
Q Consensus 1 ~~~iP~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l 80 (717)
++.||.......+|+.|+|.+|.|+.+..++++.++.|+.||||.|.|+.++... |..-.++++|+|++|.|
T Consensus 114 Lt~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~s--------fp~~~ni~~L~La~N~I 185 (873)
T KOG4194|consen 114 LTRIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPS--------FPAKVNIKKLNLASNRI 185 (873)
T ss_pred hhhcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCC--------CCCCCCceEEeeccccc
Confidence 3567877777777888888888888877888888888888888888888877544 66777888888888888
Q ss_pred cccCCcchhccccccceeeecCCcceecCCccccCCCCCcEEEccCCCCcccCCccccccCCCCEEeccCCcccccCCcc
Q 005040 81 GGILPPLIGNFSASLQNIYAFECKLGGSIPKEIGNLRGLIVLSLGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPHD 160 (717)
Q Consensus 81 ~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~ 160 (717)
+......|..+. +|.+|.|+.|+++...+..|.+|++|+.|+|..|+|.-.---+|.+|++|+.|.|..|.|.....+.
T Consensus 186 t~l~~~~F~~ln-sL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~ 264 (873)
T KOG4194|consen 186 TTLETGHFDSLN-SLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGA 264 (873)
T ss_pred cccccccccccc-hheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcc
Confidence 887778888774 7888888888888777777888888888888888887444567788888888888888888777788
Q ss_pred ccCCCCCCEEeccCCcCcccCCccccCCCCCCeEEecCccccCCCChhhhcccCCCeEEccCCcCcccCCccccCCCCCC
Q 005040 161 LCHLERLNILNLSGNKLSGAIPQCLASLTSLRSLYLQSNKLSSSLPSSLWSLEYILRINLSSNSLKGTLPSNIQKLNVLI 240 (717)
Q Consensus 161 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 240 (717)
|..|.++++|+|+.|++...-.+++-++++|+.|+||+|.|..+.++.+...++|+.|+|++|+|+...+..|..+..|+
T Consensus 265 Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le 344 (873)
T KOG4194|consen 265 FYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLE 344 (873)
T ss_pred eeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhh
Confidence 88888888888888888877777888888888888888888887888888888888888888888877788888888888
Q ss_pred eEEccCCCCCCCCcccccCCcccccccccCccccCCCC---ccccccCccceEeccCCCCCCCCcccccccccccEEEcc
Q 005040 241 DLDLSRNQLSSDIPSTIGTLKNLETLSLAGNQFQGPIP---ESVGNLISLESLDFSNNNLSGKIPKSLEALSHLKQFNVS 317 (717)
Q Consensus 241 ~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~---~~~~~l~~L~~L~L~~N~~~~~~~~~~~~l~~L~~L~l~ 317 (717)
+|+|++|.|+.+--..|..+++|++|||+.|.++..+. ..|.++++|+.|.|.+|++..+.-..|.++++|+.|||.
T Consensus 345 ~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~ 424 (873)
T KOG4194|consen 345 ELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLG 424 (873)
T ss_pred hhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCC
Confidence 88888888887666778888888888888888875443 356778889999999999986666788999999999999
Q ss_pred CCccccccccc-ccccccccccccCCccccCCC
Q 005040 318 HNRLEGEIPVK-GSFKDFSAQSYFGNYALCGPP 349 (717)
Q Consensus 318 ~N~l~~~~p~~-~~~~~~~~~~~~~n~~~c~~~ 349 (717)
+|.+...-|.. ... .++.+.+.....+|+..
T Consensus 425 ~NaiaSIq~nAFe~m-~Lk~Lv~nSssflCDCq 456 (873)
T KOG4194|consen 425 DNAIASIQPNAFEPM-ELKELVMNSSSFLCDCQ 456 (873)
T ss_pred CCcceeecccccccc-hhhhhhhcccceEEecc
Confidence 99887654432 222 45555566666677643
No 141
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=6.2e-37 Score=316.86 Aligned_cols=262 Identities=25% Similarity=0.382 Sum_probs=205.4
Q ss_pred hccCCccccccccccEEEEEEEecC-----------------CCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceee
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLSD-----------------GTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLK 487 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~ 487 (717)
.++|++.+.||+|+||.||+|...+ +..||+|.+.... ....+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 4688999999999999999988642 2458999987553 344567889999999999999999
Q ss_pred EeeeeecCCeeEEEEEccCCCCHHHHHhhCC----------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCC
Q 005040 488 ILGSCSNLDFKALVLEFMPNGSLEKWLYSHN----------YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPT 557 (717)
Q Consensus 488 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~ 557 (717)
+++++...+..++||||+++++|.+++.... ..+++..++.++.|++.||+||| +.+++||||||+
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH----~~~i~H~dlkp~ 159 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE----SLNFVHRDLATR 159 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH----HcCccccccchh
Confidence 9999999999999999999999999997643 25899999999999999999999 678999999999
Q ss_pred CeeeCCCCcEEEeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh--CCCCCCcccc
Q 005040 558 NILLDENMVAHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT--EKKPTDEMFT 635 (717)
Q Consensus 558 Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t--g~~p~~~~~~ 635 (717)
||+++.++.++|+|||++................++..|+|||+..+..++.++||||||+++|||++ |..||.....
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05051 160 NCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD 239 (296)
T ss_pred ceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh
Confidence 99999999999999999986544332222334456788999999888889999999999999999998 6677754321
Q ss_pred CcchHHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 005040 636 GEMSLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLR 703 (717)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~ 703 (717)
....+......... +... .......++.++.+++.+|++.||++|||+.|+++.|+
T Consensus 240 --~~~~~~~~~~~~~~-----~~~~-----~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 240 --QQVIENAGHFFRDD-----GRQI-----YLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred --HHHHHHHHhccccc-----cccc-----cCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 11111111110000 0000 00111234467899999999999999999999999886
No 142
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=4.7e-37 Score=313.66 Aligned_cols=254 Identities=28% Similarity=0.491 Sum_probs=197.7
Q ss_pred CCccccccccccEEEEEEEecC-CC--eEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecC------Ce
Q 005040 429 FNECNLLGTGGFGSVYKGTLSD-GT--NVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNL------DF 497 (717)
Q Consensus 429 ~~~~~~lg~G~~g~V~~~~~~~-~~--~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~------~~ 497 (717)
|.+.+.||+|+||.||+|.+.+ ++ .||+|.++... ....+.+.+|+++++.++||||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3466889999999999999753 33 58999886542 34457788999999999999999999976432 24
Q ss_pred eEEEEEccCCCCHHHHHhh-----CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeee
Q 005040 498 KALVLEFMPNGSLEKWLYS-----HNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDF 572 (717)
Q Consensus 498 ~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 572 (717)
.++||||+++|+|.+++.. ....+++..+..++.|++.||+||| +++|+||||||+||++++++.+||+||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~Df 156 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS----SKSFIHRDLAARNCMLNENMNVCVADF 156 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH----HCCeeccccchhheEEcCCCCEEECCC
Confidence 6899999999999998852 2344789999999999999999999 678999999999999999999999999
Q ss_pred ccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCc
Q 005040 573 GISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHR 651 (717)
Q Consensus 573 gl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 651 (717)
|++................+++.|+|||+..+..++.++||||||+++|||++ |+.||...... .....+.... .
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~~~--~ 232 (272)
T cd05075 157 GLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS--EIYDYLRQGN--R 232 (272)
T ss_pred CcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHcCC--C
Confidence 99987644332222223345778999999999999999999999999999999 78888653221 1111111100 0
Q ss_pred hhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 005040 652 LTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKI 705 (717)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~ 705 (717)
......++..+.+++.+||+.+|++|||+.++++.|+++
T Consensus 233 ---------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 233 ---------------LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred ---------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 001113445688999999999999999999999999864
No 143
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1e-36 Score=311.40 Aligned_cols=254 Identities=28% Similarity=0.482 Sum_probs=200.9
Q ss_pred CCccccccccccEEEEEEEec-C---CCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCe-----
Q 005040 429 FNECNLLGTGGFGSVYKGTLS-D---GTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDF----- 497 (717)
Q Consensus 429 ~~~~~~lg~G~~g~V~~~~~~-~---~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~----- 497 (717)
|.+.+.||+|+||.||+|... + +..||+|+++... ......+.+|++.++.++||||+++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 567789999999999999864 2 3679999987542 3345678899999999999999999998865443
Q ss_pred -eEEEEEccCCCCHHHHHhhC-----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEee
Q 005040 498 -KALVLEFMPNGSLEKWLYSH-----NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSD 571 (717)
Q Consensus 498 -~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~D 571 (717)
.++|+||+++|+|..++... ...+++..+..++.|++.||.||| +.+++||||||+||++++++.+||+|
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~d 156 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS----NRNFIHRDLAARNCMLREDMTVCVAD 156 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH----hCCeeccccchheEEECCCCeEEECC
Confidence 78999999999999998532 235899999999999999999999 67899999999999999999999999
Q ss_pred eccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCC
Q 005040 572 FGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPH 650 (717)
Q Consensus 572 fgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 650 (717)
||+++...............++..|+|||+..+..++.++||||||+++|||++ |..||.+.... ...++.......
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~--~~~~~~~~~~~~ 234 (273)
T cd05035 157 FGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH--EIYDYLRHGNRL 234 (273)
T ss_pred ccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCC
Confidence 999987644332222222335678999999988899999999999999999999 88888653221 111221111000
Q ss_pred chhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 005040 651 RLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKI 705 (717)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~ 705 (717)
.....++.++.+++.+||+.||.+||++.|+++.|+++
T Consensus 235 -----------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 235 -----------------KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred -----------------CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 01123456788999999999999999999999999875
No 144
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.3e-36 Score=307.46 Aligned_cols=249 Identities=24% Similarity=0.312 Sum_probs=203.8
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
+|+..+.||+|++|.||+|..+ +++.|++|.+.... ......+.+|++++++++|||++++++++.+.+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4777889999999999999875 78999999886542 34456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 505 MPNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 505 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
+++++|.++++.. ...+++..++.++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH----~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~ 156 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLH----SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN 156 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCcceEEEeCCCCEEEcccccceeccCccc
Confidence 9999999999864 456899999999999999999999 67899999999999999999999999999887654322
Q ss_pred ceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhh
Q 005040 584 SVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVRE 663 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (717)
. .....+++.|+|||+..+..++.++|+||||+++|||++|+.||..... ......+......
T Consensus 157 ~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~~~------------- 219 (256)
T cd08529 157 F--ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ--GALILKIIRGVFP------------- 219 (256)
T ss_pred h--hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHcCCCC-------------
Confidence 1 2234578899999999998999999999999999999999999975321 1111111110000
Q ss_pred hhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 664 EQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 664 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
.. ...++.++.+++.+||+.+|++||++.++++.
T Consensus 220 --~~--~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 220 --PV--SQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred --CC--ccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 00 11344668899999999999999999999863
No 145
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=4.3e-37 Score=313.15 Aligned_cols=257 Identities=26% Similarity=0.499 Sum_probs=206.3
Q ss_pred hccCCccccccccccEEEEEEEec-CC---CeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DG---TNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKAL 500 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~l 500 (717)
..+|+..+.||+|+||.||+|..+ ++ ..+|+|.+.... ....+.+..|++++++++|||++++.+++.+.+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 457888899999999999999875 33 369999886543 3345678899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCC
Q 005040 501 VLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGE 580 (717)
Q Consensus 501 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 580 (717)
||||+++++|.+++......+++..+..++.|++.|++||| +.+++||||||+||+++.++.+|++|||++.....
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH----~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 84 ITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLS----DMNYVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccccchhhEEEcCCCcEEECCCccceeccc
Confidence 99999999999999876666899999999999999999999 67899999999999999999999999999986643
Q ss_pred CCCcee-eeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccc
Q 005040 581 GEDSVI-QTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDA 658 (717)
Q Consensus 581 ~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (717)
...... ......+..|+|||+..+..++.++||||||+++|||++ |+.||..... ......+....
T Consensus 160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~--~~~~~~i~~~~---------- 227 (268)
T cd05063 160 DPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN--HEVMKAINDGF---------- 227 (268)
T ss_pred ccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH--HHHHHHHhcCC----------
Confidence 222111 111223567999999988889999999999999999998 9999865321 11111111100
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 005040 659 NLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKI 705 (717)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~ 705 (717)
..+...+++.++.+++.+||+.+|++||++.+|++.|+++
T Consensus 228 -------~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 228 -------RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred -------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0011123456688999999999999999999999999875
No 146
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.2e-37 Score=328.54 Aligned_cols=254 Identities=20% Similarity=0.291 Sum_probs=199.7
Q ss_pred HhccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEE
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKAL 500 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~l 500 (717)
..++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+....|+
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 3478999999999999999999976 68899999987532 2234557789999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCC
Q 005040 501 VLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGE 580 (717)
Q Consensus 501 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 580 (717)
||||+++|+|.+++.... +++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||++.....
T Consensus 121 v~Ey~~gg~L~~~l~~~~--~~~~~~~~~~~qil~aL~~LH----~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~ 194 (370)
T cd05621 121 VMEYMPGGDLVNLMSNYD--VPEKWAKFYTAEVVLALDAIH----SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDE 194 (370)
T ss_pred EEcCCCCCcHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCHHHEEECCCCCEEEEecccceeccc
Confidence 999999999999997653 788999999999999999999 68999999999999999999999999999987643
Q ss_pred CCCceeeeccccCccccCCCccCCC----CcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhc
Q 005040 581 GEDSVIQTMTMATIGYMAPEYGSEG----IVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVV 656 (717)
Q Consensus 581 ~~~~~~~~~~~~t~~y~aPE~~~~~----~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (717)
... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||..... ............ .
T Consensus 195 ~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~-~~~~~~i~~~~~--~----- 265 (370)
T cd05621 195 TGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL-VGTYSKIMDHKN--S----- 265 (370)
T ss_pred CCc-eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH-HHHHHHHHhCCc--c-----
Confidence 221 122345699999999987653 378999999999999999999999975321 111111111000 0
Q ss_pred cccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 005040 657 DANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHK--RIHMTDAAAK 701 (717)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~--Rpt~~ev~~~ 701 (717)
+ ..+.....+..+.+++..|+..+|.+ |+++.|+++.
T Consensus 266 ---~-----~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 266 ---L-----NFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred ---c-----CCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 0 01112234556788999999855543 8899998875
No 147
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.1e-37 Score=314.07 Aligned_cols=255 Identities=24% Similarity=0.337 Sum_probs=201.9
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
..+|++.+.||+|+||.||+|... +++.||+|++..........+.+|+.++++++||||+++++++...+..++||||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 357999999999999999999964 7889999998765444556788899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
+++++|.++++... .+++..+..++.|++.|+.||| +.+|+|||++|+||+++.++.++|+|||++........
T Consensus 88 ~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~- 161 (267)
T cd06646 88 CGGGSLQDIYHVTG-PLSELQIAYVCRETLQGLAYLH----SKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA- 161 (267)
T ss_pred CCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCccccCCCHHHEEECCCCCEEECcCccceeeccccc-
Confidence 99999999987654 4799999999999999999999 67899999999999999999999999999986643211
Q ss_pred eeeeccccCccccCCCccC---CCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccch
Q 005040 585 VIQTMTMATIGYMAPEYGS---EGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLV 661 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~---~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (717)
......++..|+|||.+. ...++.++||||||+++|||++|+.||......+. ...+..... ..+..
T Consensus 162 -~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~-~~~~~~~~~-------~~~~~- 231 (267)
T cd06646 162 -KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-LFLMSKSNF-------QPPKL- 231 (267)
T ss_pred -ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh-heeeecCCC-------CCCCC-
Confidence 112345788999999764 45578899999999999999999999854321110 000000000 00000
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 005040 662 REEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKL 702 (717)
Q Consensus 662 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L 702 (717)
......+..+.+++.+||+.+|++||+++++++.+
T Consensus 232 ------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 232 ------KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred ------ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 01112345688999999999999999999998753
No 148
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=3.9e-37 Score=316.76 Aligned_cols=259 Identities=22% Similarity=0.394 Sum_probs=203.1
Q ss_pred HhccCCccccccccccEEEEEEEec------CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCe
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTLS------DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDF 497 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~ 497 (717)
..++|++.+.||+|+||.||+|..+ .+..||+|.+.... ......+.+|+.+++.++||||+++++++.+...
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4578999999999999999999753 24579999876443 2233467889999999999999999999999999
Q ss_pred eEEEEEccCCCCHHHHHhhCC---------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEE
Q 005040 498 KALVLEFMPNGSLEKWLYSHN---------YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAH 568 (717)
Q Consensus 498 ~~lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~k 568 (717)
.++||||+++|+|.++++... ...++..+..++.|++.||.||| +++|+||||||+||+++.++.++
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH----~~~i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN----AKKFVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH----hCCCcCCCCChheEEEcCCCcEE
Confidence 999999999999999997521 23467788899999999999999 68999999999999999999999
Q ss_pred EeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhh
Q 005040 569 VSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKES 647 (717)
Q Consensus 569 l~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~ 647 (717)
|+|||+++...............++..|+|||...++.++.++|||||||++|||++ |..||...... ...+.+.
T Consensus 160 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~--~~~~~~~-- 235 (288)
T cd05061 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--QVLKFVM-- 235 (288)
T ss_pred ECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHH--
Confidence 999999886543322222222345678999999998899999999999999999998 78888652211 1111111
Q ss_pred CCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhH
Q 005040 648 LPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIK 706 (717)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~ 706 (717)
. .... .....++..+.+++.+|++.||++|||+.++++.|++..
T Consensus 236 -~--------~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 236 -D--------GGYL------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred -c--------CCCC------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 0 0000 001123456889999999999999999999999998754
No 149
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=6.1e-37 Score=316.49 Aligned_cols=263 Identities=25% Similarity=0.385 Sum_probs=201.6
Q ss_pred hccCCccccccccccEEEEEEEecC---------------CCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEe
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLSD---------------GTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKIL 489 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~~---------------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~ 489 (717)
..+|++.+.||+|+||.||++...+ ...||+|.+.... ......+.+|++++++++|||+++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 3588999999999999999987532 2348999987543 33446788999999999999999999
Q ss_pred eeeecCCeeEEEEEccCCCCHHHHHhhCC-----------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCC
Q 005040 490 GSCSNLDFKALVLEFMPNGSLEKWLYSHN-----------YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTN 558 (717)
Q Consensus 490 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~N 558 (717)
+++......++||||+++++|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+|
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH----~~~i~H~dlkp~N 159 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA----SLNFVHRDLATRN 159 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH----hcCeeccccChhh
Confidence 99999999999999999999999997532 23688899999999999999999 6789999999999
Q ss_pred eeeCCCCcEEEeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh--CCCCCCccccC
Q 005040 559 ILLDENMVAHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT--EKKPTDEMFTG 636 (717)
Q Consensus 559 ill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t--g~~p~~~~~~~ 636 (717)
|++++++.+||+|||++................++..|+|||+..++.++.++||||||+++|||++ |..||......
T Consensus 160 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~ 239 (295)
T cd05097 160 CLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE 239 (295)
T ss_pred EEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH
Confidence 9999999999999999976543322222233345778999999888889999999999999999998 55676542211
Q ss_pred cchHHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 005040 637 EMSLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRK 704 (717)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~ 704 (717)
................... .....++..+.+++.+|++.+|++||++.++++.|++
T Consensus 240 --~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 240 --QVIENTGEFFRNQGRQIYL----------SQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred --HHHHHHHHhhhhccccccC----------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 1111111110000000000 0011234568999999999999999999999998863
No 150
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=5.4e-37 Score=311.11 Aligned_cols=254 Identities=28% Similarity=0.457 Sum_probs=203.5
Q ss_pred hccCCccccccccccEEEEEEEecCCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEcc
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFM 505 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 505 (717)
.++|++.++||+|+||.||+|...++..||+|++..... ..+.+.+|+++++.++||||+++++++.+ ...++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~ 82 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 82 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcC
Confidence 357899999999999999999987777899999875322 23568889999999999999999998754 5579999999
Q ss_pred CCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 506 PNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 506 ~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
++|+|.+++... ...+++..+..++.|+++||+||| +.+++||||||+||++++++.++|+|||.+..+......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH----~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~ 158 (262)
T cd05071 83 SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE----RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 158 (262)
T ss_pred CCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHH----HCCccccccCcccEEEcCCCcEEeccCCceeeccccccc
Confidence 999999999864 345789999999999999999999 678999999999999999999999999999876443321
Q ss_pred eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchhh
Q 005040 585 VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVRE 663 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (717)
......++..|+|||+..+..++.++||||||+++|||++ |..||......+ .........
T Consensus 159 -~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~--~~~~~~~~~--------------- 220 (262)
T cd05071 159 -ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQVERGY--------------- 220 (262)
T ss_pred -cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH--HHHHHhcCC---------------
Confidence 1123346778999999988889999999999999999999 888886532211 000000000
Q ss_pred hhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 005040 664 EQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKI 705 (717)
Q Consensus 664 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~ 705 (717)
..+...+++..+.+++.+|++.+|++||+++++++.|+..
T Consensus 221 --~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 221 --RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred --CCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 0011124556788999999999999999999999999864
No 151
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.2e-36 Score=314.60 Aligned_cols=261 Identities=28% Similarity=0.469 Sum_probs=205.8
Q ss_pred ccCCccccccccccEEEEEEEec-CCC--eEEEEEechh-hHHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCCeeEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGT--NVAIKIFNLQ-LERAFRSFDSECEILRNV-RHRNLLKILGSCSNLDFKALV 501 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~--~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~lv 501 (717)
++|++.+.||+|+||.||+|..+ ++. .+++|.++.. .....+.+.+|+++++++ +||||+++++++.+....++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 57889999999999999999875 333 4788887643 233456788999999999 799999999999999999999
Q ss_pred EEccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCc
Q 005040 502 LEFMPNGSLEKWLYSHN---------------YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMV 566 (717)
Q Consensus 502 ~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~ 566 (717)
+||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH----~~~ivH~dlkp~Nill~~~~~ 157 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS----EKQFIHRDLAARNVLVGENLA 157 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCcCCcceEEECCCCe
Confidence 99999999999997532 24788999999999999999999 678999999999999999999
Q ss_pred EEEeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHH
Q 005040 567 AHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVK 645 (717)
Q Consensus 567 ~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~ 645 (717)
+||+|||++...... ........+..|+|||+..+..++.++|||||||++|||++ |+.||...... ....
T Consensus 158 ~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~-----~~~~ 229 (297)
T cd05089 158 SKIADFGLSRGEEVY---VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA-----ELYE 229 (297)
T ss_pred EEECCcCCCccccce---eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHH
Confidence 999999998643211 11111223567999999988889999999999999999998 99998653221 1111
Q ss_pred hhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHhhccch
Q 005040 646 ESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKAKFLDDV 713 (717)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~~~~~~~ 713 (717)
.. ... .. ...+..++.++.+++.+|++.+|.+||++.++++.|+.+.+.+...+
T Consensus 230 ~~-~~~--------~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~~~ 283 (297)
T cd05089 230 KL-PQG--------YR-----MEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKAYV 283 (297)
T ss_pred HH-hcC--------CC-----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcccc
Confidence 10 000 00 00112345668899999999999999999999999999987665544
No 152
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=3.8e-37 Score=321.96 Aligned_cols=241 Identities=22% Similarity=0.251 Sum_probs=194.1
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCCeeEEEE
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNV-RHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~lv~ 502 (717)
+|++.+.||+|+||.||+|... +++.||+|++.... ....+.+..|..++..+ +||+|+.+++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 5788899999999999999876 67899999997653 22334567788888877 5899999999999999999999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
||+++|+|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++.......
T Consensus 81 E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~ 155 (323)
T cd05616 81 EYVNGGDLMYQIQQVG-RFKEPHAVFYAAEIAIGLFFLH----SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG 155 (323)
T ss_pred cCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCC
Confidence 9999999999987654 3889999999999999999999 6789999999999999999999999999987543221
Q ss_pred CceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchh
Q 005040 583 DSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVR 662 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (717)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+... . .
T Consensus 156 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~--~~~~~~i~~~---~--------~-- 218 (323)
T cd05616 156 V--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELFQSIMEH---N--------V-- 218 (323)
T ss_pred C--ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH--HHHHHHHHhC---C--------C--
Confidence 1 12345689999999999999999999999999999999999999975321 1111111110 0 0
Q ss_pred hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCH
Q 005040 663 EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHM 695 (717)
Q Consensus 663 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~ 695 (717)
..+...+.++.+++.+|++.||++|+++
T Consensus 219 -----~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 219 -----AYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred -----CCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 0011234567899999999999999985
No 153
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=3.4e-37 Score=321.40 Aligned_cols=241 Identities=23% Similarity=0.259 Sum_probs=194.2
Q ss_pred ccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCCeeEEEEEccCC
Q 005040 433 NLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNV-RHRNLLKILGSCSNLDFKALVLEFMPN 507 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~ 507 (717)
+.||+|+||.||+|..+ +++.||+|+++... ......+..|.++++.+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999876 68899999998653 23345677899999888 699999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceee
Q 005040 508 GSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQ 587 (717)
Q Consensus 508 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 587 (717)
|+|..++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++........ ..
T Consensus 81 ~~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~LH----~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~ 153 (318)
T cd05570 81 GDLMFHIQRSG-RFDEPRARFYAAEIVLGLQFLH----ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV--TT 153 (318)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----hCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCC--cc
Confidence 99999988654 4899999999999999999999 68999999999999999999999999999875322211 11
Q ss_pred eccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhh
Q 005040 588 TMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAF 667 (717)
Q Consensus 588 ~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (717)
....|++.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.. .. .
T Consensus 154 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~--~~~~~~i~~---~~--------~------- 213 (318)
T cd05570 154 STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE--DELFQSILE---DE--------V------- 213 (318)
T ss_pred cceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH--HHHHHHHHc---CC--------C-------
Confidence 234689999999999999999999999999999999999999965321 111111110 00 0
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCCCH-----HHHHH
Q 005040 668 SDKMDCLFSIMDLALDCCMDTPHKRIHM-----TDAAA 700 (717)
Q Consensus 668 ~~~~~~~~~l~~li~~cl~~~P~~Rpt~-----~ev~~ 700 (717)
..+..++.++.+++.+||+.||.+||++ .++++
T Consensus 214 ~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 214 RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 0011234568899999999999999999 77754
No 154
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=4.9e-37 Score=319.55 Aligned_cols=240 Identities=24% Similarity=0.304 Sum_probs=191.6
Q ss_pred ccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCCeeEEEEEccCC
Q 005040 433 NLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNV-RHRNLLKILGSCSNLDFKALVLEFMPN 507 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~ 507 (717)
+.||+|+||.||+|... +++.||+|+++... ....+.+..|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999975 67899999998653 23345566788888765 899999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceee
Q 005040 508 GSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQ 587 (717)
Q Consensus 508 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 587 (717)
|+|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++........ ..
T Consensus 81 g~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~LH----~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~ 153 (316)
T cd05619 81 GDLMFHIQSCH-KFDLPRATFYAAEIICGLQFLH----SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA--KT 153 (316)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----hCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC--ce
Confidence 99999998653 4789999999999999999999 68999999999999999999999999999875322211 12
Q ss_pred eccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhh
Q 005040 588 TMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAF 667 (717)
Q Consensus 588 ~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (717)
....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ....+.+.... +.+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~--~~~~~~i~~~~---------~~~------- 215 (316)
T cd05619 154 CTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE--EELFQSIRMDN---------PCY------- 215 (316)
T ss_pred eeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhCC---------CCC-------
Confidence 334689999999999998999999999999999999999999975321 11111111100 000
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCCCHH-HHH
Q 005040 668 SDKMDCLFSIMDLALDCCMDTPHKRIHMT-DAA 699 (717)
Q Consensus 668 ~~~~~~~~~l~~li~~cl~~~P~~Rpt~~-ev~ 699 (717)
+ ..++.++.+++.+||+.||++||++. ++.
T Consensus 216 ~--~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 216 P--RWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred C--ccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 0 12345578999999999999999997 554
No 155
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.3e-36 Score=312.34 Aligned_cols=269 Identities=25% Similarity=0.406 Sum_probs=204.3
Q ss_pred cCCccccccccccEEEEEEEe-----cCCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecC--CeeE
Q 005040 428 EFNECNLLGTGGFGSVYKGTL-----SDGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNL--DFKA 499 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~--~~~~ 499 (717)
-|++.+.||+|+||.||+++. .++..||+|.++... ......+.+|+++++.++|||++++++++.+. ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 467889999999999999974 257889999987543 33456788999999999999999999998765 5679
Q ss_pred EEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccC
Q 005040 500 LVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLG 579 (717)
Q Consensus 500 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 579 (717)
+||||+++++|.+++.+....+++..+..++.|++.||+||| +++++||||||+||+++.++.++|+|||+++.+.
T Consensus 85 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH----~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLG----SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 160 (284)
T ss_pred EEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH----HCCeeecccchheEEEcCCCCEEECCCccccccc
Confidence 999999999999999876556899999999999999999999 6899999999999999999999999999998765
Q ss_pred CCCCce-eeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCC-chhhhcc
Q 005040 580 EGEDSV-IQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPH-RLTEVVD 657 (717)
Q Consensus 580 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 657 (717)
...... ......++..|+|||+..+..++.++||||||+++|||++++.|+...... ..........+ .....+.
T Consensus 161 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05079 161 TDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTL---FLKMIGPTHGQMTVTRLVR 237 (284)
T ss_pred cCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccch---hhhhcccccccccHHHHHH
Confidence 433211 112334677899999988888999999999999999999988765321110 00000000000 0000000
Q ss_pred ccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 005040 658 ANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKI 705 (717)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~ 705 (717)
. + ......+....++.++.+++.+|++.+|++||+++++++.++++
T Consensus 238 ~-~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 238 V-L-EEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred H-H-HcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 0 0 00000111224567799999999999999999999999999875
No 156
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=5.8e-37 Score=311.92 Aligned_cols=256 Identities=28% Similarity=0.481 Sum_probs=206.3
Q ss_pred ccCCccccccccccEEEEEEEec----CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS----DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALV 501 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv 501 (717)
++|++.+.||+|+||.||+|... .+..+|+|.++... ....+.+..|+.++++++||||+++++++.+.+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 57888999999999999999863 23479999886543 33456788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCC
Q 005040 502 LEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEG 581 (717)
Q Consensus 502 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 581 (717)
|||+++++|.+++......+++.++..++.|++.|++||| +.+++||||||+||+++.++.++++|||++......
T Consensus 84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH----~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd05066 84 TEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLS----DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 159 (267)
T ss_pred EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCEeehhhchhcEEECCCCeEEeCCCCcccccccc
Confidence 9999999999999877666899999999999999999999 678999999999999999999999999999876543
Q ss_pred CCcee-eeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhcccc
Q 005040 582 EDSVI-QTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDAN 659 (717)
Q Consensus 582 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (717)
..... .....++..|+|||+..+..++.++|+||||+++||+++ |+.||...... .....+.....
T Consensus 160 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~--~~~~~~~~~~~---------- 227 (267)
T cd05066 160 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ--DVIKAIEEGYR---------- 227 (267)
T ss_pred cceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH--HHHHHHhCCCc----------
Confidence 22111 111223567999999998899999999999999999887 99998653221 11222111100
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 005040 660 LVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKI 705 (717)
Q Consensus 660 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~ 705 (717)
.+....++..+.+++.+|++.+|.+||++.++++.|.++
T Consensus 228 -------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 228 -------LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred -------CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 011123455688999999999999999999999999875
No 157
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=7.6e-37 Score=308.95 Aligned_cols=248 Identities=25% Similarity=0.454 Sum_probs=197.1
Q ss_pred cccccccEEEEEEEec---CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCCCC
Q 005040 434 LLGTGGFGSVYKGTLS---DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPNGS 509 (717)
Q Consensus 434 ~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 509 (717)
.||+|+||.||+|.+. ++..||+|++.... ....+.+.+|+.++++++||||+++++++.. +..++||||+++|+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCC
Confidence 4899999999999764 45579999987553 3334668899999999999999999998864 56799999999999
Q ss_pred HHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCce-eee
Q 005040 510 LEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSV-IQT 588 (717)
Q Consensus 510 L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~-~~~ 588 (717)
|.+++......+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++.......... ...
T Consensus 81 L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 156 (257)
T cd05115 81 LNKFLSGKKDEITVSNVVELMHQVSMGMKYLE----GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARS 156 (257)
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH----hcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccC
Confidence 99999876667899999999999999999999 6789999999999999999999999999998654332211 112
Q ss_pred ccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhh
Q 005040 589 MTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAF 667 (717)
Q Consensus 589 ~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (717)
...++..|+|||+..+..++.++||||||+++||+++ |+.||...... .....+....+ .
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~-----------------~ 217 (257)
T cd05115 157 AGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--EVMSFIEQGKR-----------------L 217 (257)
T ss_pred CCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHHCCCC-----------------C
Confidence 2233578999999888889999999999999999996 99998764221 11111111100 0
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 005040 668 SDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKI 705 (717)
Q Consensus 668 ~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~ 705 (717)
..+..++.++.+++.+||..+|++||++.++.+.|+.+
T Consensus 218 ~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 218 DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 01123456788999999999999999999999999864
No 158
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=5e-37 Score=319.68 Aligned_cols=240 Identities=22% Similarity=0.284 Sum_probs=191.6
Q ss_pred ccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCCeeEEEEEccCC
Q 005040 433 NLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNV-RHRNLLKILGSCSNLDFKALVLEFMPN 507 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~ 507 (717)
+.||+|+||.||+|+.+ +|+.||+|+++... ....+....|..++... +||||+++++++.+.+..|+||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999976 78899999997653 22345566788888765 899999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceee
Q 005040 508 GSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQ 587 (717)
Q Consensus 508 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 587 (717)
|+|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.++|+|||+++...... ...
T Consensus 81 g~L~~~i~~~~-~~~~~~~~~~~~qi~~~l~~lH----~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~ 153 (316)
T cd05620 81 GDLMFHIQDKG-RFDLYRATFYAAEIVCGLQFLH----SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD--NRA 153 (316)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCC--Cce
Confidence 99999987653 4889999999999999999999 6899999999999999999999999999987532211 122
Q ss_pred eccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhh
Q 005040 588 TMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAF 667 (717)
Q Consensus 588 ~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (717)
....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ....+.+.... +.+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~--~~~~~~~~~~~---------~~~------- 215 (316)
T cd05620 154 STFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE--DELFESIRVDT---------PHY------- 215 (316)
T ss_pred eccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--HHHHHHHHhCC---------CCC-------
Confidence 345689999999999999999999999999999999999999965321 11111111100 000
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCCCHH-HHH
Q 005040 668 SDKMDCLFSIMDLALDCCMDTPHKRIHMT-DAA 699 (717)
Q Consensus 668 ~~~~~~~~~l~~li~~cl~~~P~~Rpt~~-ev~ 699 (717)
+ ..++.++.+++.+||+.||++||++. ++.
T Consensus 216 ~--~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 216 P--RWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred C--CCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 0 11345678999999999999999985 554
No 159
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.2e-37 Score=325.17 Aligned_cols=238 Identities=26% Similarity=0.290 Sum_probs=192.3
Q ss_pred ccccccccEEEEEEEe----cCCCeEEEEEechhhH--HHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccC
Q 005040 433 NLLGTGGFGSVYKGTL----SDGTNVAIKIFNLQLE--RAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMP 506 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 506 (717)
+.||+|+||.||+++. .+|+.||+|++..... .....+..|++++++++||||+++++++.+.+..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999875 3688999999976542 233456789999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCcee
Q 005040 507 NGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVI 586 (717)
Q Consensus 507 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~ 586 (717)
+|+|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++........ .
T Consensus 82 ~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~--~ 154 (318)
T cd05582 82 GGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLH----SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK--K 154 (318)
T ss_pred CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC--c
Confidence 999999997654 4899999999999999999999 67899999999999999999999999999876543221 1
Q ss_pred eeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhh
Q 005040 587 QTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQA 666 (717)
Q Consensus 587 ~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (717)
.....||+.|+|||.+.+..++.++|||||||++|||++|+.||...... .....+. ... .
T Consensus 155 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~--~~~~~i~---~~~--------~------ 215 (318)
T cd05582 155 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK--ETMTMIL---KAK--------L------ 215 (318)
T ss_pred eecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH--HHHHHHH---cCC--------C------
Confidence 23456899999999998888999999999999999999999999753211 1111110 000 0
Q ss_pred hhhhHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 005040 667 FSDKMDCLFSIMDLALDCCMDTPHKRIHMTD 697 (717)
Q Consensus 667 ~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~e 697 (717)
..+..++.++.+++.+||+.||++||++.+
T Consensus 216 -~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 216 -GMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred -CCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 001123456789999999999999999655
No 160
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=6.5e-37 Score=318.46 Aligned_cols=265 Identities=19% Similarity=0.286 Sum_probs=200.9
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
++|...+.||+|+||.||+|..+ +++.||+|.++... ......+.+|++++++++||||+++++++.+.+..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 57889999999999999999875 78889999987543 22234567899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
+++ +|.+++...+..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 86 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH----~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~- 159 (309)
T cd07872 86 LDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCH----RRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK- 159 (309)
T ss_pred CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEECCCCCEEECccccceecCCCcc-
Confidence 974 899998877666899999999999999999999 68999999999999999999999999999876433221
Q ss_pred eeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCC----chhhhc---
Q 005040 585 VIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPH----RLTEVV--- 656 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~--- 656 (717)
......+++.|+|||++.+ ..++.++||||+|+++|||+||+.||......+ ....... .... .+....
T Consensus 160 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~ 236 (309)
T cd07872 160 -TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED-ELHLIFR-LLGTPTEETWPGISSND 236 (309)
T ss_pred -ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHH-HhCCCCHHHHhhhcchh
Confidence 1223457899999998754 568999999999999999999999997532211 1111111 0000 000000
Q ss_pred ---cccchhh--hhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 657 ---DANLVRE--EQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 657 ---~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
+...... ..........+.++.+++.+|++.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 237 EFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 0000000 0000111234567889999999999999999999987
No 161
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=8.2e-37 Score=315.40 Aligned_cols=250 Identities=23% Similarity=0.300 Sum_probs=203.3
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEcc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFM 505 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 505 (717)
.+|+..+.||+|+||.||+|... +++.||+|.+..........+.+|+.+++.++|||++++++++......++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 58888999999999999999864 78999999987655445567889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCce
Q 005040 506 PNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSV 585 (717)
Q Consensus 506 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 585 (717)
++++|.+++.+. .+++.++..++.|++.||.||| +.+|+||||||+||+++.++.++|+|||++........
T Consensus 100 ~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL~~LH----~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~-- 171 (296)
T cd06654 100 AGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH----SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-- 171 (296)
T ss_pred CCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEEcCCCCEEECccccchhcccccc--
Confidence 999999998754 3789999999999999999999 67899999999999999999999999999876543221
Q ss_pred eeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhh
Q 005040 586 IQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQ 665 (717)
Q Consensus 586 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (717)
......+++.|+|||...+..++.++|||||||++|||++|+.||...... ..+.... .... +.
T Consensus 172 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~----~~~~~~~-~~~~-----~~------ 235 (296)
T cd06654 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL----RALYLIA-TNGT-----PE------ 235 (296)
T ss_pred ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH----HhHHHHh-cCCC-----CC------
Confidence 122346888999999998888999999999999999999999999653221 1111110 0000 00
Q ss_pred hhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 666 AFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 666 ~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
.......+..+.+++.+||..+|++||++.|+++.
T Consensus 236 -~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 236 -LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred -CCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 00111334567899999999999999999999873
No 162
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=7.8e-37 Score=313.15 Aligned_cols=259 Identities=25% Similarity=0.443 Sum_probs=208.5
Q ss_pred hccCCccccccccccEEEEEEEec-CCC----eEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGT----NVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKA 499 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~ 499 (717)
..+|+..+.||+|+||.||+|..+ +|+ .||+|.+.... ......+.+|+.+++.++||||+++++++.. ...+
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 84 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQ 84 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceE
Confidence 367888999999999999999864 333 58999886554 3345678899999999999999999999887 7789
Q ss_pred EEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccC
Q 005040 500 LVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLG 579 (717)
Q Consensus 500 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 579 (717)
+||||+++|+|.+++......+++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||+++...
T Consensus 85 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH----~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~ 160 (279)
T cd05057 85 LITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLE----EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLD 160 (279)
T ss_pred EEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH----hCCEEecccCcceEEEcCCCeEEECCCccccccc
Confidence 999999999999999987666999999999999999999999 6789999999999999999999999999998765
Q ss_pred CCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccc
Q 005040 580 EGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDA 658 (717)
Q Consensus 580 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (717)
............++..|+|||......++.++|+||||+++||+++ |+.||..... ......+....
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~~---------- 228 (279)
T cd05057 161 VDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA--VEIPDLLEKGE---------- 228 (279)
T ss_pred CcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH--HHHHHHHhCCC----------
Confidence 4332222222334678999999888899999999999999999999 9999875321 11122111100
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHh
Q 005040 659 NLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKAK 708 (717)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~~ 708 (717)
..+.+..++.++.+++.+||..+|.+||++.++++.|+++.+.
T Consensus 229 -------~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 229 -------RLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred -------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 0011112345678999999999999999999999999998654
No 163
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.1e-36 Score=308.63 Aligned_cols=253 Identities=27% Similarity=0.463 Sum_probs=203.3
Q ss_pred hccCCccccccccccEEEEEEEecCCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEcc
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFM 505 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 505 (717)
.++|++.+.||+|+||.||+|...++..||+|.+..... ..+.+.+|+.++++++|||++++++++.+ ...++||||+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~ 82 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTEYM 82 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEEEec
Confidence 457889999999999999999988888899999875432 23568899999999999999999998854 5579999999
Q ss_pred CCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 506 PNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 506 ~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
++++|.+++... ...+++.++..++.|++.||+||| +.+++||||||+||++++++.++|+|||++.........
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH----~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05070 83 SKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE----RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT 158 (260)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccc
Confidence 999999999864 345899999999999999999999 678999999999999999999999999999876433211
Q ss_pred eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchhh
Q 005040 585 VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVRE 663 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (717)
......++..|+|||+..+..++.++||||||+++|||++ |..||...... ...+......+
T Consensus 159 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~~~-------------- 221 (260)
T cd05070 159 -ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR--EVLEQVERGYR-------------- 221 (260)
T ss_pred -cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHcCCC--------------
Confidence 1122235678999999888889999999999999999999 88898653211 11111111000
Q ss_pred hhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 005040 664 EQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRK 704 (717)
Q Consensus 664 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~ 704 (717)
.+.+.+++..+.+++.+|+..+|++|||+.++.+.|++
T Consensus 222 ---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 222 ---MPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred ---CCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 01112345668899999999999999999999999875
No 164
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.2e-36 Score=320.71 Aligned_cols=260 Identities=27% Similarity=0.422 Sum_probs=202.2
Q ss_pred hccCCccccccccccEEEEEEEe------cCCCeEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecC-C
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTL------SDGTNVAIKIFNLQL-ERAFRSFDSECEILRNV-RHRNLLKILGSCSNL-D 496 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~-~ 496 (717)
.++|++.+.||+|+||.||+|.+ .+++.||||+++... ....+.+.+|+.++.++ +||||+++++++... .
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 36899999999999999999973 357889999987543 33446788899999999 689999999987654 4
Q ss_pred eeEEEEEccCCCCHHHHHhhCC----------------------------------------------------------
Q 005040 497 FKALVLEFMPNGSLEKWLYSHN---------------------------------------------------------- 518 (717)
Q Consensus 497 ~~~lv~e~~~~g~L~~~l~~~~---------------------------------------------------------- 518 (717)
..++||||+++|+|.+++....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 6789999999999999987421
Q ss_pred --------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceeeecc
Q 005040 519 --------YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQTMT 590 (717)
Q Consensus 519 --------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~ 590 (717)
..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++...............
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH----~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 241 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLA----SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDA 241 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCC
Confidence 23678888999999999999999 689999999999999999999999999999865332222222223
Q ss_pred ccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhh
Q 005040 591 MATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSD 669 (717)
Q Consensus 591 ~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (717)
.++..|+|||...+..++.++||||||+++|||++ |..||....... .....+...... ..
T Consensus 242 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~~~~~~~~~~-----------------~~ 303 (343)
T cd05103 242 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTRM-----------------RA 303 (343)
T ss_pred CCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH-HHHHHHhccCCC-----------------CC
Confidence 45678999999988899999999999999999997 899986532211 111111100000 00
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHH
Q 005040 670 KMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKA 707 (717)
Q Consensus 670 ~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~ 707 (717)
+...+.++.+++.+||+.+|++|||+.|+++.|+.+.+
T Consensus 304 ~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 304 PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 01123457899999999999999999999999998765
No 165
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=8.3e-37 Score=307.66 Aligned_cols=247 Identities=33% Similarity=0.498 Sum_probs=199.3
Q ss_pred ccccccccEEEEEEEecCCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCCCCHH
Q 005040 433 NLLGTGGFGSVYKGTLSDGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPNGSLE 511 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~ 511 (717)
+.||+|+||.||+|..++++.+|+|.+.... ......+.+|+++++.++||||+++++++.+.+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 3689999999999998889999999886543 333456888999999999999999999999999999999999999999
Q ss_pred HHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceeeeccc
Q 005040 512 KWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQTMTM 591 (717)
Q Consensus 512 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~ 591 (717)
+++......+++..+..++.|++.||.|+| +.+++||||||+||+++.++.+|++|||++......... ......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~ 155 (250)
T cd05085 81 SFLRKKKDELKTKQLVKFALDAAAGMAYLE----SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYS-SSGLKQ 155 (250)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeecccChheEEEcCCCeEEECCCccceeccccccc-cCCCCC
Confidence 999876666899999999999999999999 678999999999999999999999999998754322111 111223
Q ss_pred cCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhhh
Q 005040 592 ATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSDK 670 (717)
Q Consensus 592 ~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (717)
++..|+|||+..++.++.++||||||+++||+++ |..||...... .....+.... . . ...
T Consensus 156 ~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~--~~~~~~~~~~--~------~---------~~~ 216 (250)
T cd05085 156 IPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ--QAREQVEKGY--R------M---------SCP 216 (250)
T ss_pred CcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHHcCC--C------C---------CCC
Confidence 4677999999988899999999999999999998 99998653221 1111111100 0 0 001
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 005040 671 MDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLR 703 (717)
Q Consensus 671 ~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~ 703 (717)
..++.++.+++.+|++.+|++||++.|+++.|.
T Consensus 217 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 217 QKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 123466889999999999999999999999875
No 166
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-36 Score=315.58 Aligned_cols=251 Identities=24% Similarity=0.292 Sum_probs=210.1
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhhH---HHHHHHHHHHHHHHhcC-CCceeeEeeeeecCCeeEE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLE---RAFRSFDSECEILRNVR-HRNLLKILGSCSNLDFKAL 500 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~-hpniv~~~~~~~~~~~~~l 500 (717)
...|+..+.||+|.||.||+++.+ +|+.+|+|++.+... .....+.+|+++|+++. |||||.+.+.|++....++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 467888899999999999999976 599999999977653 24468899999999998 9999999999999999999
Q ss_pred EEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCC----CcEEEeeecccc
Q 005040 501 VLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDEN----MVAHVSDFGISK 576 (717)
Q Consensus 501 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfgl~~ 576 (717)
|||++.||.|.+.+... . +++..+..++.|++.+++||| +.+|+|||+||+|+|+... +.+|++|||++.
T Consensus 114 vmEL~~GGeLfd~i~~~-~-~sE~da~~~~~~il~av~~lH----~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~ 187 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK-H-YSERDAAGIIRQILEAVKYLH----SLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAK 187 (382)
T ss_pred EEEecCCchHHHHHHHc-c-CCHHHHHHHHHHHHHHHHHHH----hCCceeccCCHHHeeeccccCCCCcEEEeeCCCce
Confidence 99999999999999877 3 899999999999999999999 7899999999999999643 579999999999
Q ss_pred ccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhc
Q 005040 577 LLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVV 656 (717)
Q Consensus 577 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (717)
.... .......+||+.|+|||++....|+..+||||+||++|.|++|.+||.+....+.. .. +.
T Consensus 188 ~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~-~~------------i~ 251 (382)
T KOG0032|consen 188 FIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIF-LA------------IL 251 (382)
T ss_pred EccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHH-HH------------HH
Confidence 8865 22345678999999999999999999999999999999999999999764322111 11 11
Q ss_pred cccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 657 DANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
...+. -........+..+.+++..|+..||.+|+|+.++++.
T Consensus 252 ~~~~~---f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 252 RGDFD---FTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred cCCCC---CCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 11110 0112233456778999999999999999999999984
No 167
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=9.4e-37 Score=312.31 Aligned_cols=255 Identities=24% Similarity=0.414 Sum_probs=204.4
Q ss_pred hccCCccccccccccEEEEEEEec------CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCee
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS------DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFK 498 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~ 498 (717)
.++|++.+.||+|+||.||+|..+ .+..||+|.+.... ......+.+|+.+++.++||||+++++++.+....
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 468889999999999999999864 23679999986543 23445788899999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHhhCC---------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEE
Q 005040 499 ALVLEFMPNGSLEKWLYSHN---------YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHV 569 (717)
Q Consensus 499 ~lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl 569 (717)
++||||+++|+|.+++.... ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~di~p~nill~~~~~~kl 160 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA----AKKFVHRDLAARNCMVAEDLTVKI 160 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH----hCCccccccChheEEEcCCCCEEE
Confidence 99999999999999997432 23678899999999999999999 678999999999999999999999
Q ss_pred eeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhC
Q 005040 570 SDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESL 648 (717)
Q Consensus 570 ~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 648 (717)
+|||+++...............++..|+|||...++.++.++||||||+++||+++ |..||..... ....++.....
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--~~~~~~~~~~~ 238 (277)
T cd05032 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN--EEVLKFVIDGG 238 (277)
T ss_pred CCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH--HHHHHHHhcCC
Confidence 99999886644332222233446788999999988889999999999999999998 8999865321 11222221100
Q ss_pred CCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 005040 649 PHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLR 703 (717)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~ 703 (717)
. . ..+..++.++.+++.+||+.+|++|||+.++++.|+
T Consensus 239 ~-----------~------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 239 H-----------L------DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred C-----------C------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 0 0 001123566889999999999999999999999886
No 168
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=6.2e-37 Score=309.92 Aligned_cols=248 Identities=26% Similarity=0.412 Sum_probs=200.3
Q ss_pred ccccccccEEEEEEEecC--C--CeEEEEEechhhH-HHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCC
Q 005040 433 NLLGTGGFGSVYKGTLSD--G--TNVAIKIFNLQLE-RAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPN 507 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 507 (717)
+.||+|++|.||+|.+.+ + ..||+|.+..... ...+.+.+|++++++++||||+++++++.+ ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999998642 3 3689999976654 566789999999999999999999999988 888999999999
Q ss_pred CCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCce-
Q 005040 508 GSLEKWLYSHN-YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSV- 585 (717)
Q Consensus 508 g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~- 585 (717)
++|.+++.+.. ..+++..++.++.|++.||+||| +.+++|+||+|+||+++.++.+||+|||++..+.......
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH----~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 155 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLE----SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYV 155 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHH----hCCccccccCcccEEEecCCEEEecccccccccccccccee
Confidence 99999998765 56899999999999999999999 6899999999999999999999999999998775432221
Q ss_pred eeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhh
Q 005040 586 IQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREE 664 (717)
Q Consensus 586 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (717)
......++..|+|||+..+..++.++||||||+++|||++ |+.||...... ...+..... ...
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~-~~~------------- 219 (257)
T cd05040 156 MEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS--QILKKIDKE-GER------------- 219 (257)
T ss_pred cccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHhc-CCc-------------
Confidence 1123356788999999998899999999999999999999 99998653221 111111110 000
Q ss_pred hhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 005040 665 QAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLR 703 (717)
Q Consensus 665 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~ 703 (717)
......++..+.+++.+|++.+|++||++.++++.|.
T Consensus 220 --~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 220 --LERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred --CCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 0011134466889999999999999999999999885
No 169
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1e-36 Score=307.21 Aligned_cols=248 Identities=33% Similarity=0.515 Sum_probs=200.7
Q ss_pred ccccccccEEEEEEEecCCCeEEEEEechhhH-HHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCCCCHH
Q 005040 433 NLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLE-RAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPNGSLE 511 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~ 511 (717)
++||+|+||.||+|...+++.||+|.+..... .....+.+|++++++++||||+++++++.+....++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 46999999999999987799999998875443 34567889999999999999999999999999999999999999999
Q ss_pred HHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceeeeccc
Q 005040 512 KWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQTMTM 591 (717)
Q Consensus 512 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~ 591 (717)
+++......+++..+..++.+++.|+.||| +.+++||||+|+||+++.++.++|+|||++................
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH----~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 156 (251)
T cd05041 81 TFLRKKKNRLTVKKLLQMSLDAAAGMEYLE----SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQ 156 (251)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----hCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCc
Confidence 999876556889999999999999999999 6789999999999999999999999999998654222111112223
Q ss_pred cCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhhh
Q 005040 592 ATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSDK 670 (717)
Q Consensus 592 ~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (717)
.+..|+|||...++.++.++|+||||+++|||++ |..||...... .....+.... ....+
T Consensus 157 ~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~--~~~~~~~~~~-----------------~~~~~ 217 (251)
T cd05041 157 IPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ--QTRERIESGY-----------------RMPAP 217 (251)
T ss_pred ceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH--HHHHHHhcCC-----------------CCCCC
Confidence 4667999999888899999999999999999999 88888653211 1111111100 00111
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 005040 671 MDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLR 703 (717)
Q Consensus 671 ~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~ 703 (717)
..++.++.+++.+|+..+|.+||++.|+++.|.
T Consensus 218 ~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 218 QLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred ccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 234567889999999999999999999999886
No 170
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=5.3e-37 Score=314.60 Aligned_cols=253 Identities=25% Similarity=0.339 Sum_probs=204.8
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
.++|++.+.||+|+||.||+|... ++..||+|++........+.+.+|++++++++||||+++++++.+....++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 357889999999999999999975 6899999998766555667788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
+++++|.+++......+++..+..++.|++.|+.||| +.+|+|+||+|+||+++.++.++|+|||++........
T Consensus 84 ~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh----~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~- 158 (280)
T cd06611 84 CDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLH----SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ- 158 (280)
T ss_pred cCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCChhhEEECCCCCEEEccCccchhhccccc-
Confidence 9999999999876667999999999999999999999 67899999999999999999999999999876533221
Q ss_pred eeeeccccCccccCCCccC-----CCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhcccc
Q 005040 585 VIQTMTMATIGYMAPEYGS-----EGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDAN 659 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~-----~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (717)
......+++.|+|||++. ...++.++||||||+++|||++|+.||...... .....+.....
T Consensus 159 -~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~----------- 225 (280)
T cd06611 159 -KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM-RVLLKILKSEP----------- 225 (280)
T ss_pred -ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH-HHHHHHhcCCC-----------
Confidence 123345789999999764 445788999999999999999999998753211 11111110000
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 660 LVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 660 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
+....+..++.++.+++.+||+.+|++||++.++++.
T Consensus 226 -----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 226 -----PTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred -----CCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 0001112344568899999999999999999999764
No 171
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=4.7e-37 Score=326.36 Aligned_cols=258 Identities=21% Similarity=0.285 Sum_probs=201.2
Q ss_pred HHHHHhccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCC
Q 005040 421 DIRRATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLD 496 (717)
Q Consensus 421 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~ 496 (717)
+.+...++|++.+.||+|+||.||+|..+ +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+..
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 116 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence 34555689999999999999999999976 78899999986532 233455778999999999999999999999999
Q ss_pred eeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeecccc
Q 005040 497 FKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISK 576 (717)
Q Consensus 497 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 576 (717)
..++||||+++|+|.+++.... +++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.
T Consensus 117 ~~~lv~Ey~~gg~L~~~~~~~~--~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~ 190 (371)
T cd05622 117 YLYMVMEYMPGGDLVNLMSNYD--VPEKWARFYTAEVVLALDAIH----SMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 190 (371)
T ss_pred EEEEEEcCCCCCcHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHH----HCCEEeCCCCHHHEEECCCCCEEEEeCCcee
Confidence 9999999999999999997653 788889999999999999999 6899999999999999999999999999998
Q ss_pred ccCCCCCceeeeccccCccccCCCccCCC----CcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCch
Q 005040 577 LLGEGEDSVIQTMTMATIGYMAPEYGSEG----IVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRL 652 (717)
Q Consensus 577 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~----~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 652 (717)
....... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||...... .......... ..
T Consensus 191 ~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-~~~~~i~~~~--~~- 265 (371)
T cd05622 191 KMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-GTYSKIMNHK--NS- 265 (371)
T ss_pred EcCcCCc-ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH-HHHHHHHcCC--Cc-
Confidence 7643221 122345689999999987653 3789999999999999999999999753211 0111110000 00
Q ss_pred hhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 005040 653 TEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHK--RIHMTDAAAK 701 (717)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~--Rpt~~ev~~~ 701 (717)
..++....++..+.+++..|+...+.+ |+++.|+++.
T Consensus 266 ------------~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 266 ------------LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred ------------ccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 001112234566889999999844433 7788888874
No 172
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-38 Score=329.36 Aligned_cols=256 Identities=27% Similarity=0.438 Sum_probs=216.0
Q ss_pred cCCccccccccccEEEEEEEe-cCCC----eEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEE
Q 005040 428 EFNECNLLGTGGFGSVYKGTL-SDGT----NVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALV 501 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~-~~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv 501 (717)
+....++||+|+||+||+|.+ ..|+ +||+|++.... .+...++.+|+-+|.++.|||+++++|++.... +.+|
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlv 775 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLV 775 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHH
Confidence 344568999999999999986 3443 58999886543 445678999999999999999999999997665 7899
Q ss_pred EEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCC
Q 005040 502 LEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEG 581 (717)
Q Consensus 502 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 581 (717)
++|++.|+|.+|++.++..+-.+....|..|||+|+.||| .+++|||||.++|||+.+-.++||.|||+++.+...
T Consensus 776 tq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe----~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 776 TQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLE----EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred HHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH----hcchhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence 9999999999999998888999999999999999999999 678999999999999999999999999999998776
Q ss_pred CCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccc
Q 005040 582 EDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANL 660 (717)
Q Consensus 582 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (717)
+.........-++.|||-|.+....|+.++|||||||++||++| |..|+++....+ +.+.+
T Consensus 852 ~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e--------------I~dll---- 913 (1177)
T KOG1025|consen 852 EKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE--------------IPDLL---- 913 (1177)
T ss_pred cccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH--------------hhHHH----
Confidence 65554444455788999999999999999999999999999999 999998743221 11111
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHH
Q 005040 661 VREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKA 707 (717)
Q Consensus 661 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~ 707 (717)
+.....+.+.-|+.++..++.+||..|++.||+++++.+.+.++.+
T Consensus 914 -e~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ar 959 (1177)
T KOG1025|consen 914 -EKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMAR 959 (1177)
T ss_pred -hccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence 1222355666888999999999999999999999999999988744
No 173
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=9.8e-37 Score=312.92 Aligned_cols=250 Identities=25% Similarity=0.317 Sum_probs=200.1
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccC
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMP 506 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 506 (717)
-|++.+.||+|+||.||+|... ++..+|+|.+........+.+.+|+++++.++|||++++++++...+..++|+||++
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~ 85 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 85 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence 3577789999999999999976 578889999876555556778899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCcee
Q 005040 507 NGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVI 586 (717)
Q Consensus 507 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~ 586 (717)
+++|..++......+++..+..++.|+++||.||| +.+++||||||+||+++.++.++++|||++........ .
T Consensus 86 ~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH----~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~--~ 159 (282)
T cd06643 86 GGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLH----ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ--R 159 (282)
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCCcccEEEccCCCEEEcccccccccccccc--c
Confidence 99999988765566899999999999999999999 67899999999999999999999999999876532211 1
Q ss_pred eeccccCccccCCCccC-----CCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccch
Q 005040 587 QTMTMATIGYMAPEYGS-----EGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLV 661 (717)
Q Consensus 587 ~~~~~~t~~y~aPE~~~-----~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (717)
.....++..|+|||++. +..++.++|||||||++|||++|+.||......+ ..........+ .
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~~~~~~~~~---------~-- 227 (282)
T cd06643 160 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSEPP---------T-- 227 (282)
T ss_pred cccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH-HHHHHhhcCCC---------C--
Confidence 23345889999999873 4557889999999999999999999986532111 11111110000 0
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 662 REEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 662 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
...+..++.++.+++.+||+.+|.+||++.++++
T Consensus 228 -----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 228 -----LAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred -----CCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0011123456889999999999999999999875
No 174
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=9.6e-37 Score=308.45 Aligned_cols=247 Identities=26% Similarity=0.406 Sum_probs=196.5
Q ss_pred cccccccEEEEEEEec---CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCCC
Q 005040 434 LLGTGGFGSVYKGTLS---DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPNG 508 (717)
Q Consensus 434 ~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 508 (717)
.||+|+||.||+|.++ ++..+|+|+++... ....+.+.+|+.+++.++||||+++++++.+ +..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCC
Confidence 5899999999999753 67889999986443 3345678899999999999999999998864 4668999999999
Q ss_pred CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCce-ee
Q 005040 509 SLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSV-IQ 587 (717)
Q Consensus 509 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~-~~ 587 (717)
+|.+++.... .+++..+..++.|++.|++||| +++|+||||||+||+++.++.+||+|||++.......... ..
T Consensus 81 ~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH----~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05116 81 PLNKFLQKNK-HVTEKNITELVHQVSMGMKYLE----ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAK 155 (257)
T ss_pred cHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeec
Confidence 9999997654 4899999999999999999999 6789999999999999999999999999998765433221 11
Q ss_pred eccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhh
Q 005040 588 TMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQA 666 (717)
Q Consensus 588 ~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (717)
....++..|+|||......++.++||||||+++|||++ |+.||..... ......+......
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~i~~~~~~---------------- 217 (257)
T cd05116 156 THGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG--NEVTQMIESGERM---------------- 217 (257)
T ss_pred CCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHCCCCC----------------
Confidence 22234678999999888889999999999999999998 9999975322 1122221110000
Q ss_pred hhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 005040 667 FSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKI 705 (717)
Q Consensus 667 ~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~ 705 (717)
+.+..++.++.++|.+||+.||++||++.+|++.|+..
T Consensus 218 -~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 218 -ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred -CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 01113456688999999999999999999999999753
No 175
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.1e-36 Score=314.79 Aligned_cols=262 Identities=25% Similarity=0.381 Sum_probs=202.2
Q ss_pred ccCCccccccccccEEEEEEEec-----------------CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-----------------DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKI 488 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-----------------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~ 488 (717)
++|++.+.||+|+||.||++... ++..||+|++.... ......+.+|+++++.++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 57899999999999999998532 23468999987543 3345678899999999999999999
Q ss_pred eeeeecCCeeEEEEEccCCCCHHHHHhhCC----------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCC
Q 005040 489 LGSCSNLDFKALVLEFMPNGSLEKWLYSHN----------YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTN 558 (717)
Q Consensus 489 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~N 558 (717)
++++.+.+..++||||+++|+|.+++.... ..+++.++..++.|++.|++||| +.+++||||||+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH----~~~i~H~dlkp~N 160 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS----SLNFVHRDLATRN 160 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH----HCCeecccCChhe
Confidence 999999999999999999999999997532 23677889999999999999999 6789999999999
Q ss_pred eeeCCCCcEEEeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh--CCCCCCccccC
Q 005040 559 ILLDENMVAHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT--EKKPTDEMFTG 636 (717)
Q Consensus 559 ill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t--g~~p~~~~~~~ 636 (717)
|+++.++.++|+|||++..+.............++..|+|||+..++.++.++|||||||++|||++ |..||......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE 240 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH
Confidence 9999999999999999986643322222223345678999998888889999999999999999998 67787643221
Q ss_pred cchHHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 005040 637 EMSLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRK 704 (717)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~ 704 (717)
+ ................ ..+....++..+.+++.+||+.||++||++.|+++.|++
T Consensus 241 ~--~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 241 Q--VIENTGEFFRDQGRQV----------YLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred H--HHHHHHHHHhhccccc----------cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 1 1111111000000000 001112345678899999999999999999999999863
No 176
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=3.9e-37 Score=321.82 Aligned_cols=237 Identities=27% Similarity=0.296 Sum_probs=188.0
Q ss_pred ccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHH-HHHhcCCCceeeEeeeeecCCeeEEEEEccCC
Q 005040 433 NLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECE-ILRNVRHRNLLKILGSCSNLDFKALVLEFMPN 507 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 507 (717)
+.||+|+||.||+|... +|+.||+|++.... ......+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999975 78999999997543 222234445544 56788999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceee
Q 005040 508 GSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQ 587 (717)
Q Consensus 508 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 587 (717)
|+|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++........ ..
T Consensus 81 g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH----~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~--~~ 153 (323)
T cd05575 81 GELFFHLQRER-SFPEPRARFYAAEIASALGYLH----SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSK--TT 153 (323)
T ss_pred CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCC--cc
Confidence 99999998654 4889999999999999999999 67999999999999999999999999999875322211 12
Q ss_pred eccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhh
Q 005040 588 TMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAF 667 (717)
Q Consensus 588 ~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (717)
....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+......... ..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-----~~~~~~i~~~~--------~~------ 214 (323)
T cd05575 154 STFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT-----AEMYDNILNKP--------LR------ 214 (323)
T ss_pred ccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH-----HHHHHHHHcCC--------CC------
Confidence 344689999999999999999999999999999999999999965321 11111111000 00
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCCCHH
Q 005040 668 SDKMDCLFSIMDLALDCCMDTPHKRIHMT 696 (717)
Q Consensus 668 ~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ 696 (717)
.....+.++.+++.+|++.||++||++.
T Consensus 215 -~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 215 -LKPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred -CCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 0012345678999999999999999985
No 177
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-38 Score=323.48 Aligned_cols=244 Identities=26% Similarity=0.370 Sum_probs=201.2
Q ss_pred cccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCCCCHHH
Q 005040 434 LLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPNGSLEK 512 (717)
Q Consensus 434 ~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~ 512 (717)
++|+|.||+||-|++. +...+|||-+.....+..+.+..|+...++++|.|||+++|++.+.++.-+.||.++||+|.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 6999999999999975 566799999987777777889999999999999999999999999999999999999999999
Q ss_pred HHhhCCCCC--CHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeC-CCCcEEEeeeccccccCCCCCceeeec
Q 005040 513 WLYSHNYFL--DILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLD-ENMVAHVSDFGISKLLGEGEDSVIQTM 589 (717)
Q Consensus 513 ~l~~~~~~~--~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfgl~~~~~~~~~~~~~~~ 589 (717)
.++..=+++ .+.++.-+.+||++||.||| ...|||||||-.|||++ -.|.+||+|||-++++..-. .....
T Consensus 662 LLrskWGPlKDNEstm~fYtkQILeGLkYLH----en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgin--P~TET 735 (1226)
T KOG4279|consen 662 LLRSKWGPLKDNESTMNFYTKQILEGLKYLH----ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGIN--PCTET 735 (1226)
T ss_pred HHHhccCCCccchhHHHHHHHHHHHHhhhhh----hcceeeccccCCcEEEeeccceEEecccccchhhccCC--ccccc
Confidence 999654445 66778889999999999999 56799999999999997 68899999999998874322 22345
Q ss_pred cccCccccCCCccCCC--CcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhh
Q 005040 590 TMATIGYMAPEYGSEG--IVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAF 667 (717)
Q Consensus 590 ~~~t~~y~aPE~~~~~--~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (717)
..||..|||||++..+ .|+.++|||||||++.||.||++||-+.-.... .++.-.+-+..+
T Consensus 736 FTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA---------------AMFkVGmyKvHP-- 798 (1226)
T KOG4279|consen 736 FTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA---------------AMFKVGMYKVHP-- 798 (1226)
T ss_pred cccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH---------------hhhhhcceecCC--
Confidence 5799999999998765 488999999999999999999999976432211 122222222222
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 668 SDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 668 ~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
+.+.+.+.+...+|.+|+.+||.+||+++++++
T Consensus 799 ~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 799 PIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred CCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 223466788999999999999999999999875
No 178
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.5e-36 Score=313.19 Aligned_cols=251 Identities=26% Similarity=0.320 Sum_probs=202.2
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEcc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFM 505 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 505 (717)
+.|++.+.||+|+||.||+|+.. +++.||+|++........+.+.+|+++++.++||||+++++++......++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 56889999999999999999975 68999999997666666678889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCce
Q 005040 506 PNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSV 585 (717)
Q Consensus 506 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 585 (717)
++++|..++.+....+++..+..++.|++.|+.||| +.+++||||||+||+++.++.++|+|||++....... .
T Consensus 92 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH----~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~--~ 165 (292)
T cd06644 92 PGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLH----SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL--Q 165 (292)
T ss_pred CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh----cCCeeecCCCcceEEEcCCCCEEEccCccceeccccc--c
Confidence 999999988766666899999999999999999999 6799999999999999999999999999887543221 1
Q ss_pred eeeccccCccccCCCccC-----CCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccc
Q 005040 586 IQTMTMATIGYMAPEYGS-----EGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANL 660 (717)
Q Consensus 586 ~~~~~~~t~~y~aPE~~~-----~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (717)
......++..|+|||++. ...++.++|||||||++|||++|+.||..... ......+..... +
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-~~~~~~~~~~~~---------~-- 233 (292)
T cd06644 166 RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-MRVLLKIAKSEP---------P-- 233 (292)
T ss_pred ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH-HHHHHHHhcCCC---------c--
Confidence 122345788999999874 44578899999999999999999999865321 111111110000 0
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 661 VREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 661 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.......++.++.+++.+||+.+|++||++.|+++
T Consensus 234 -----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 234 -----TLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred -----cCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00111233456789999999999999999999976
No 179
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=2.1e-36 Score=308.09 Aligned_cols=255 Identities=27% Similarity=0.340 Sum_probs=201.3
Q ss_pred HHHhccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEE
Q 005040 423 RRATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALV 501 (717)
Q Consensus 423 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv 501 (717)
+.+++.+.....||+|+||.||+|... +++.||+|.+........+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 83 (268)
T cd06624 4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIF 83 (268)
T ss_pred ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEE
Confidence 445566666789999999999999865 6788999988766555667889999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhhCCCCC--CHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCC-CCcEEEeeecccccc
Q 005040 502 LEFMPNGSLEKWLYSHNYFL--DILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDE-NMVAHVSDFGISKLL 578 (717)
Q Consensus 502 ~e~~~~g~L~~~l~~~~~~~--~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfgl~~~~ 578 (717)
+||+++++|.+++......+ ++..+..++.|++.|++||| +.+|+||||||+||+++. ++.++|+|||++...
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH----~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~ 159 (268)
T cd06624 84 MEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLH----DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRL 159 (268)
T ss_pred EecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHH----HCCEeecCCCHHHEEEcCCCCeEEEecchhheec
Confidence 99999999999998654445 78888999999999999999 679999999999999986 679999999998765
Q ss_pred CCCCCceeeeccccCccccCCCccCCCC--cCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhc
Q 005040 579 GEGEDSVIQTMTMATIGYMAPEYGSEGI--VSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVV 656 (717)
Q Consensus 579 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~--~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (717)
..... ......++..|+|||+..+.. ++.++||||||+++|||++|+.||....... ...+.....
T Consensus 160 ~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~--~~~~~~~~~-------- 227 (268)
T cd06624 160 AGINP--CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQ--AAMFKVGMF-------- 227 (268)
T ss_pred ccCCC--ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChh--hhHhhhhhh--------
Confidence 43221 122335788999999876543 7889999999999999999999986532111 111111000
Q ss_pred cccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 657 DANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
...+. .+..++.++.+++.+||+.+|++|||+.|+++
T Consensus 228 -----~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 228 -----KIHPE--IPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred -----ccCCC--CCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 00000 01133456889999999999999999999875
No 180
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.3e-36 Score=308.14 Aligned_cols=239 Identities=22% Similarity=0.331 Sum_probs=190.3
Q ss_pred ccccccccEEEEEEEecC-------------CCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeE
Q 005040 433 NLLGTGGFGSVYKGTLSD-------------GTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKA 499 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~ 499 (717)
+.||+|+||.||+|...+ ...||+|.+..........+.+|+.+++.++||||+++++++.+....+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 368999999999998532 2258999887665555567888999999999999999999999988999
Q ss_pred EEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCc-------EEEeee
Q 005040 500 LVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMV-------AHVSDF 572 (717)
Q Consensus 500 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~-------~kl~Df 572 (717)
+||||+++|+|..++......+++..+..++.|+++|++||| +.+|+||||||+||+++.++. ++++||
T Consensus 81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLE----DKDLVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh----hCCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 999999999999999876666899999999999999999999 689999999999999987664 899999
Q ss_pred ccccccCCCCCceeeeccccCccccCCCccC-CCCcCcccchhhHHHHHHHHH-hCCCCCCccccCcchHHHHHHhhCCC
Q 005040 573 GISKLLGEGEDSVIQTMTMATIGYMAPEYGS-EGIVSTKCDVYSYGVLLMETF-TEKKPTDEMFTGEMSLRRWVKESLPH 650 (717)
Q Consensus 573 gl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~Dvws~G~il~el~-tg~~p~~~~~~~~~~~~~~~~~~~~~ 650 (717)
|++...... ....++..|+|||++. +..++.++|||||||++|||+ +|+.|+......+ ........
T Consensus 157 g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~--~~~~~~~~--- 225 (262)
T cd05077 157 GIPITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE--KERFYEGQ--- 225 (262)
T ss_pred CCCccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH--HHHHHhcC---
Confidence 998765321 2235788899999876 567899999999999999998 5888876421111 01100000
Q ss_pred chhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 005040 651 RLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKL 702 (717)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L 702 (717)
. ........++.+++.+||+.||++||++.++++.+
T Consensus 226 ---------~-------~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 226 ---------C-------MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred ---------c-------cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 0 00011234578999999999999999999998875
No 181
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.3e-36 Score=307.39 Aligned_cols=249 Identities=27% Similarity=0.360 Sum_probs=205.4
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEcc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFM 505 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 505 (717)
++|+..+.||+|+||.||+|... +++.+|+|.+..... .+.+.+|++++++++||||+++++++.+....++++||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 67899999999999999999976 488999999875533 578899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCce
Q 005040 506 PNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSV 585 (717)
Q Consensus 506 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 585 (717)
++++|.+++......+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh----~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~-- 154 (256)
T cd06612 81 GAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLH----SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA-- 154 (256)
T ss_pred CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCcceEEECCCCcEEEcccccchhcccCcc--
Confidence 999999999876677899999999999999999999 67899999999999999999999999999987643321
Q ss_pred eeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhh
Q 005040 586 IQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQ 665 (717)
Q Consensus 586 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (717)
......++..|+|||++.+..++.++||||||+++|||++|+.||........ ......... .
T Consensus 155 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~--~~~~~~~~~---------------~ 217 (256)
T cd06612 155 KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA--IFMIPNKPP---------------P 217 (256)
T ss_pred ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh--hhhhccCCC---------------C
Confidence 12334578899999999888999999999999999999999999875322110 000000000 0
Q ss_pred hhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 666 AFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 666 ~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.......++.++.+++.+|++.+|++|||++|+++
T Consensus 218 ~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 218 TLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred CCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 01112234456889999999999999999999985
No 182
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.6e-36 Score=309.34 Aligned_cols=258 Identities=25% Similarity=0.402 Sum_probs=206.3
Q ss_pred hccCCccccccccccEEEEEEEecC----CCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLSD----GTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKAL 500 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~l 500 (717)
..+|.+.+.||+|+||.||+|...+ ...||+|...... ....+.+.+|+.++++++||||+++++++.+ ...++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l 83 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI 83 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence 3568888999999999999998643 3468999887554 4455678999999999999999999999876 45689
Q ss_pred EEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCC
Q 005040 501 VLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGE 580 (717)
Q Consensus 501 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 580 (717)
||||+++|+|.+++......+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++.....
T Consensus 84 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH----~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 84 VMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLE----SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLED 159 (270)
T ss_pred EEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeccccChheEEEecCCCeEEccCceeeeccc
Confidence 99999999999999876666899999999999999999999 67899999999999999999999999999876543
Q ss_pred CCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhcccc
Q 005040 581 GEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDAN 659 (717)
Q Consensus 581 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (717)
... .......++..|+|||......++.++||||||+++||+++ |..||...... ....+..... ..
T Consensus 160 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~--~~~~~~~~~~--~~------- 227 (270)
T cd05056 160 ESY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN--DVIGRIENGE--RL------- 227 (270)
T ss_pred ccc-eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH--HHHHHHHcCC--cC-------
Confidence 321 11222234568999999888889999999999999999996 99999754321 1111111100 00
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHh
Q 005040 660 LVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKAK 708 (717)
Q Consensus 660 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~~ 708 (717)
.....++.++.+++.+|+..+|++|||+.++++.|++++..
T Consensus 228 --------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 228 --------PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred --------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 01123456788999999999999999999999999988653
No 183
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=2e-36 Score=307.06 Aligned_cols=248 Identities=30% Similarity=0.527 Sum_probs=204.0
Q ss_pred ccccccccEEEEEEEecC----CCeEEEEEechhhHH-HHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCC
Q 005040 433 NLLGTGGFGSVYKGTLSD----GTNVAIKIFNLQLER-AFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPN 507 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 507 (717)
+.||+|+||.||+|.... +..||+|++...... ..+.+.+|+++++.++|+|++++++++.+....++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999999753 888999999765433 367888999999999999999999999999999999999999
Q ss_pred CCHHHHHhhC--------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccC
Q 005040 508 GSLEKWLYSH--------NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLG 579 (717)
Q Consensus 508 g~L~~~l~~~--------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 579 (717)
++|.+++... ...+++..++.++.|+++||+||| +.+++||||+|+||+++.++.++|+|||.+....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH----~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 156 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA----SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVY 156 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH----cCCcccCccCcceEEECCCCcEEEcccccccccc
Confidence 9999999876 466899999999999999999999 6899999999999999999999999999998775
Q ss_pred CCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccc
Q 005040 580 EGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDA 658 (717)
Q Consensus 580 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (717)
............++..|+|||......++.++||||+|+++|||++ |..||..... ....+......
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~~~~~---------- 224 (262)
T cd00192 157 DDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN--EEVLEYLRKGY---------- 224 (262)
T ss_pred cccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHcCC----------
Confidence 4432222334457889999999888899999999999999999999 6999876421 11111111100
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 005040 659 NLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLR 703 (717)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~ 703 (717)
.......++.++.+++.+|++.+|++|||+.|+++.|+
T Consensus 225 -------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 225 -------RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred -------CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 00111233567889999999999999999999998873
No 184
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=2.1e-36 Score=306.53 Aligned_cols=253 Identities=24% Similarity=0.420 Sum_probs=204.2
Q ss_pred hccCCccccccccccEEEEEEEecCCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEcc
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFM 505 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 505 (717)
.++|++.++||+|+||.||+|..++++.||+|.+..... ....+.+|+.++++++||||+++++++. .+..++||||+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYM 82 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcC
Confidence 468899999999999999999988899999999875432 2357888999999999999999999875 45689999999
Q ss_pred CCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 506 PNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 506 ~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
++++|.+++... +..+++.++..++.|++.||+||| +.+++||||||+||++++++.++|+|||++.........
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH----~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05067 83 ENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE----RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYT 158 (260)
T ss_pred CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHh----cCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcc
Confidence 999999998753 346899999999999999999999 678999999999999999999999999999766432211
Q ss_pred eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchhh
Q 005040 585 VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVRE 663 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (717)
......++..|+|||+..+..++.++||||||+++||+++ |+.||.+.... ............
T Consensus 159 -~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~~------------- 222 (260)
T cd05067 159 -AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP--EVIQNLERGYRM------------- 222 (260)
T ss_pred -cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH--HHHHHHHcCCCC-------------
Confidence 1223345678999999988889999999999999999999 99999753221 111111111000
Q ss_pred hhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 005040 664 EQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRK 704 (717)
Q Consensus 664 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~ 704 (717)
+....++.++.+++.+|+..+|++||+++++++.|+.
T Consensus 223 ----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 223 ----PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred ----CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 0111234568899999999999999999999999874
No 185
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=2.6e-36 Score=305.20 Aligned_cols=250 Identities=30% Similarity=0.481 Sum_probs=205.4
Q ss_pred hccCCccccccccccEEEEEEEecCCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEcc
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFM 505 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 505 (717)
.++|+..+.||.|+||.||+|... |+.||+|.+..... ..+.+.+|+.++++++|+||+++++++.+....++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 357888999999999999999874 88999999976644 4567889999999999999999999999889999999999
Q ss_pred CCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 506 PNGSLEKWLYSHN-YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 506 ~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
++++|.+++.... ..+++..+..++.|++.|+.||| +.+++||||||+||+++.++.++|+|||.+........
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh----~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~- 157 (256)
T cd05039 83 AKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE----EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD- 157 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH----hCCccchhcccceEEEeCCCCEEEcccccccccccccc-
Confidence 9999999998654 35899999999999999999999 68899999999999999999999999999987632211
Q ss_pred eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchhh
Q 005040 585 VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVRE 663 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (717)
....+..|+|||+..++.++.++||||||+++||+++ |+.||..... .............
T Consensus 158 ----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~~~~~~~------------- 218 (256)
T cd05039 158 ----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPHVEKGYRM------------- 218 (256)
T ss_pred ----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHhcCCCC-------------
Confidence 2234667999999988889999999999999999998 9999865311 1111111110000
Q ss_pred hhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 005040 664 EQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKI 705 (717)
Q Consensus 664 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~ 705 (717)
.....++.++.+++.+|+..+|++||++.|+++.|+.+
T Consensus 219 ----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 219 ----EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred ----CCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 00113456788999999999999999999999999753
No 186
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=8.2e-37 Score=316.50 Aligned_cols=257 Identities=30% Similarity=0.490 Sum_probs=202.0
Q ss_pred hccCCccccccccccEEEEEEEec-CCC--eEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCCeeEE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGT--NVAIKIFNLQL-ERAFRSFDSECEILRNV-RHRNLLKILGSCSNLDFKAL 500 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~l 500 (717)
.++|++.+.||+|+||.||+|.++ ++. .+|+|.++... ....+.+.+|++++.++ +||||+++++++.+.+..++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 468888999999999999999875 454 45777765432 33456788899999999 89999999999999999999
Q ss_pred EEEccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC
Q 005040 501 VLEFMPNGSLEKWLYSHN---------------YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENM 565 (717)
Q Consensus 501 v~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~ 565 (717)
||||+++|+|.++++... ..+++.++..++.|++.|++||| +.+++||||||+||+++.++
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH----~~gi~H~dlkp~Nili~~~~ 161 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS----QKQFIHRDLAARNILVGENY 161 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH----hCCccccccchheEEecCCC
Confidence 999999999999997532 24789999999999999999999 68999999999999999999
Q ss_pred cEEEeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHH
Q 005040 566 VAHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWV 644 (717)
Q Consensus 566 ~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~ 644 (717)
.+||+|||++...... ........+..|+|||+..+..++.++|||||||++|||+| |..||...... ......
T Consensus 162 ~~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~ 236 (303)
T cd05088 162 VAKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEKL 236 (303)
T ss_pred cEEeCccccCcccchh---hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH--HHHHHH
Confidence 9999999998643211 11112234667999999888889999999999999999998 99998653211 111111
Q ss_pred HhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHh
Q 005040 645 KESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKAK 708 (717)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~~ 708 (717)
.... .. .....++.++.+++.+|++.+|++||++.++++.|+++...
T Consensus 237 ~~~~--~~---------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~ 283 (303)
T cd05088 237 PQGY--RL---------------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 283 (303)
T ss_pred hcCC--cC---------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 1000 00 00112345688999999999999999999999999987543
No 187
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.3e-36 Score=318.14 Aligned_cols=243 Identities=19% Similarity=0.253 Sum_probs=192.1
Q ss_pred ccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCCeeEEEEEccCC
Q 005040 433 NLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNV-RHRNLLKILGSCSNLDFKALVLEFMPN 507 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~ 507 (717)
+.||+|+||.||+|... +++.||+|++.... ....+.+..|+.++.++ +||+|+++++++.+....|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999975 68899999998653 23445678899999888 699999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceee
Q 005040 508 GSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQ 587 (717)
Q Consensus 508 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 587 (717)
|+|..++...+ .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++........ ..
T Consensus 81 ~~L~~~~~~~~-~l~~~~~~~~~~qi~~al~~lH----~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~--~~ 153 (327)
T cd05617 81 GDLMFHMQRQR-KLPEEHARFYAAEICIALNFLH----ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGD--TT 153 (327)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCC--ce
Confidence 99999887654 4899999999999999999999 68999999999999999999999999999875322111 12
Q ss_pred eccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccC-cchHHHHHHhhCCCchhhhccccchhhhhh
Q 005040 588 TMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTG-EMSLRRWVKESLPHRLTEVVDANLVREEQA 666 (717)
Q Consensus 588 ~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (717)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ......+....... ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~-------~~~------ 220 (327)
T cd05617 154 STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILE-------KPI------ 220 (327)
T ss_pred ecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHh-------CCC------
Confidence 3456899999999999999999999999999999999999999643221 11111111111000 000
Q ss_pred hhhhHHHHHHHHHHHhhccCCCCCCCCCHH
Q 005040 667 FSDKMDCLFSIMDLALDCCMDTPHKRIHMT 696 (717)
Q Consensus 667 ~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ 696 (717)
..+...+..+.+++.+||+.||++|++++
T Consensus 221 -~~p~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 221 -RIPRFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred -CCCCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 00112345578999999999999999853
No 188
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=3.9e-36 Score=305.25 Aligned_cols=252 Identities=25% Similarity=0.317 Sum_probs=201.2
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh-----HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-----ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKAL 500 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~l 500 (717)
+.|+..+.||+|++|.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 46889999999999999999864 78999999886432 2234568889999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCC
Q 005040 501 VLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGE 580 (717)
Q Consensus 501 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 580 (717)
|+||+++++|.+++.... .+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++|+|||++.....
T Consensus 82 v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lH----~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~ 156 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG-ALTETVTRKYTRQILEGVEYLH----SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT 156 (263)
T ss_pred EEEECCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEeecccceeccc
Confidence 999999999999998654 3788999999999999999999 67899999999999999999999999999876543
Q ss_pred CCCce-eeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhcccc
Q 005040 581 GEDSV-IQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDAN 659 (717)
Q Consensus 581 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (717)
..... ......++..|+|||+..+..++.++||||+|+++|||++|+.||...... ......... ... .
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~-~~~------~- 226 (263)
T cd06625 157 ICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM--AAIFKIATQ-PTN------P- 226 (263)
T ss_pred cccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH--HHHHHHhcc-CCC------C-
Confidence 22111 112345788999999999988999999999999999999999998653111 000110000 000 0
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 660 LVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 660 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
..+..++..+.+++.+||..+|.+|||+.|+++.
T Consensus 227 --------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 227 --------QLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred --------CCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 0111344568899999999999999999999863
No 189
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=2.3e-36 Score=313.91 Aligned_cols=264 Identities=22% Similarity=0.285 Sum_probs=204.0
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
++|++.+.||+|+||.||+|... ++..+|+|.+.... ......+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 36889999999999999999875 68889999886543 33445688899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
+++++|.++++... .+++..+..++.|+++||.|||+ ..+++|+||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-- 154 (308)
T cd06615 81 MDGGSLDQVLKKAG-RIPENILGKISIAVLRGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-- 154 (308)
T ss_pred cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh---hCCEEECCCChHHEEEecCCcEEEccCCCcccccccc--
Confidence 99999999998653 48899999999999999999994 2589999999999999999999999999987653221
Q ss_pred eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCc-------------
Q 005040 585 VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHR------------- 651 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~------------- 651 (717)
.....++..|+|||+..+..++.++||||||+++|||++|+.||.... ......+........
T Consensus 155 --~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (308)
T cd06615 155 --ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPD--AKELEAMFGRPVSEGEAKESHRPVSGHP 230 (308)
T ss_pred --cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcc--hhhHHHhhcCccccccccCCcccccCCC
Confidence 233467899999999888889999999999999999999999986432 112222221110000
Q ss_pred --------hhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 652 --------LTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 652 --------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
..+..+.......+.. ....++.++.+++.+|++.+|++|||+.|+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 231 PDSPRPMAIFELLDYIVNEPPPKL-PSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred CCccchhhHHHHHHHHhcCCCccC-cCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000000000000000 011245678999999999999999999999876
No 190
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=8.9e-37 Score=314.27 Aligned_cols=256 Identities=25% Similarity=0.428 Sum_probs=203.6
Q ss_pred hccCCccccccccccEEEEEEEec------CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCee
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS------DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFK 498 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~ 498 (717)
.++|+..+.||+|+||.||+|..+ ++..||+|++.... ......+.+|+.+++++.||||+++++++.+.+..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 467899999999999999999863 46789999987543 33446788999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHhhCC---------------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCC
Q 005040 499 ALVLEFMPNGSLEKWLYSHN---------------------YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPT 557 (717)
Q Consensus 499 ~lv~e~~~~g~L~~~l~~~~---------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~ 557 (717)
++||||+++|+|.+++.... ..+++..+..++.|++.||.||| +.+++||||||+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH----~~~i~H~dl~p~ 159 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS----ERKFVHRDLATR 159 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH----hCCeecccccHh
Confidence 99999999999999997431 24678889999999999999999 678999999999
Q ss_pred CeeeCCCCcEEEeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccC
Q 005040 558 NILLDENMVAHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTG 636 (717)
Q Consensus 558 Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~ 636 (717)
||+++.++.++|+|||++..+..............+..|+|||...+..++.++|||||||++|||++ |..||.+....
T Consensus 160 nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~ 239 (288)
T cd05050 160 NCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE 239 (288)
T ss_pred heEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 99999999999999999876543322211222345677999999888899999999999999999998 88888543211
Q ss_pred cchHHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 005040 637 EMSLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRK 704 (717)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~ 704 (717)
.....+.. .. .. +.+..++.++.+++.+|++.+|++|||+.|+++.|++
T Consensus 240 --~~~~~~~~---~~--------~~------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 240 --EVIYYVRD---GN--------VL------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred --HHHHHHhc---CC--------CC------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 11111110 00 00 0111344668899999999999999999999999873
No 191
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1e-36 Score=315.88 Aligned_cols=259 Identities=27% Similarity=0.451 Sum_probs=205.4
Q ss_pred hccCCccccccccccEEEEEEEec-CCC----eEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGT----NVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKA 499 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~ 499 (717)
.++|+..+.||+|+||.||+|.+. ++. .||+|.+.... ......+.+|+.+++.++||||+++++++... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 367888899999999999999864 444 47889876543 23334688899999999999999999998754 467
Q ss_pred EEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccC
Q 005040 500 LVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLG 579 (717)
Q Consensus 500 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 579 (717)
+++||+++|+|.+++......+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 85 ~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH----~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~ 160 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLE----ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLE 160 (303)
T ss_pred eeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHh----hcCeeccccccceeeecCCCceEEcccccccccc
Confidence 999999999999999877666899999999999999999999 6789999999999999999999999999998764
Q ss_pred CCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccc
Q 005040 580 EGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDA 658 (717)
Q Consensus 580 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (717)
............++..|+|||++.+..++.++||||||+++|||++ |+.||.+... .....++.....
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~--~~~~~~~~~~~~--------- 229 (303)
T cd05110 161 GDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT--REIPDLLEKGER--------- 229 (303)
T ss_pred CcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHCCCC---------
Confidence 3332222223345778999999998899999999999999999998 8999865321 122222221100
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHh
Q 005040 659 NLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKAK 708 (717)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~~ 708 (717)
. +....++.++.+++.+||..+|++||++.++++.|+++...
T Consensus 230 -~-------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 230 -L-------PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred -C-------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0 00112345678999999999999999999999999987544
No 192
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=6.8e-37 Score=320.34 Aligned_cols=241 Identities=25% Similarity=0.276 Sum_probs=189.0
Q ss_pred ccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHH-HHHHhcCCCceeeEeeeeecCCeeEEEEEccCC
Q 005040 433 NLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSEC-EILRNVRHRNLLKILGSCSNLDFKALVLEFMPN 507 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~-~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 507 (717)
+.||+|+||.||+|+.. +++.||+|++.... ......+..|. .+++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36999999999999976 67889999997543 12223344444 456788999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceee
Q 005040 508 GSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQ 587 (717)
Q Consensus 508 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 587 (717)
|+|.+++.... .+++..+..++.|+++||.||| +.+|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 81 ~~L~~~~~~~~-~~~~~~~~~~~~qi~~~L~~lH----~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~--~~ 153 (325)
T cd05602 81 GELFYHLQRER-CFLEPRARFYAAEIASALGYLH----SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG--TT 153 (325)
T ss_pred CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCC--Cc
Confidence 99999998654 3778888889999999999999 68999999999999999999999999999875432211 12
Q ss_pred eccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhh
Q 005040 588 TMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAF 667 (717)
Q Consensus 588 ~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (717)
....||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...+.+.. . ..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i~~---~--------~~------- 213 (325)
T cd05602 154 STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA--EMYDNILN---K--------PL------- 213 (325)
T ss_pred ccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH--HHHHHHHh---C--------Cc-------
Confidence 3446899999999999999999999999999999999999999653211 11111110 0 00
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 668 SDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 668 ~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
......+..+.+++.+|++.||.+||++.+.+.
T Consensus 214 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 214 QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 001123456789999999999999999875443
No 193
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.4e-36 Score=309.16 Aligned_cols=253 Identities=25% Similarity=0.355 Sum_probs=201.2
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
.++|+..+.||+|+||.||+|... +++.||+|+++.........+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~ 87 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF 87 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence 357888899999999999999864 7889999998766544556678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
+++++|.+++...+ .+++.++..++.|++.|+.||| +.+++|+||||+||+++.++.++|+|||++........
T Consensus 88 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~- 161 (267)
T cd06645 88 CGGGSLQDIYHVTG-PLSESQIAYVSRETLQGLYYLH----SKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIA- 161 (267)
T ss_pred cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEECCCCCEEECcceeeeEccCccc-
Confidence 99999999987654 4899999999999999999999 67899999999999999999999999999876543211
Q ss_pred eeeeccccCccccCCCccC---CCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccch
Q 005040 585 VIQTMTMATIGYMAPEYGS---EGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLV 661 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~---~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (717)
......|+..|+|||++. ...++.++||||+||++|||++|+.||....+... .......... .+..
T Consensus 162 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~-~~~~~~~~~~-------~~~~- 231 (267)
T cd06645 162 -KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-LFLMTKSNFQ-------PPKL- 231 (267)
T ss_pred -ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh-HHhhhccCCC-------CCcc-
Confidence 123346899999999864 45688999999999999999999999854322111 0000000000 0000
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 662 REEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 662 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.....++..+.+++.+|++.+|++||+++++++
T Consensus 232 ------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 232 ------KDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred ------cccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 011123455789999999999999999999875
No 194
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.3e-36 Score=324.34 Aligned_cols=266 Identities=24% Similarity=0.259 Sum_probs=197.8
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCC-----eeE
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLD-----FKA 499 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~-----~~~ 499 (717)
+|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.... ..|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4788899999999999999964 79999999886432 233456888999999999999999999998766 789
Q ss_pred EEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccC
Q 005040 500 LVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLG 579 (717)
Q Consensus 500 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 579 (717)
+||||+. ++|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 81 lv~e~~~-~~l~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH----~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQ-PLSSDHVKVFLYQILRGLKYLH----SAGILHRDIKPGNLLVNSNCVLKICDFGLARVEE 154 (372)
T ss_pred EEeeccc-cCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCChHHEEECCCCCEEeccccceeecc
Confidence 9999996 58888886543 4899999999999999999999 6789999999999999999999999999998654
Q ss_pred CCCCceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhh---
Q 005040 580 EGEDSVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEV--- 655 (717)
Q Consensus 580 ~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--- 655 (717)
.... .......+++.|+|||++.+ ..++.++||||+||++|||++|+.||.+.... ..+.............+.
T Consensus 155 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~g~~~~~~~~~~ 232 (372)
T cd07853 155 PDES-KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPI-QQLDLITDLLGTPSLEAMRSA 232 (372)
T ss_pred cCcc-ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHH-HHHHHHHHHcCCCCHHHHHHh
Confidence 3221 11233457899999998776 45799999999999999999999999763221 111111110000000000
Q ss_pred -------ccccc---hhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 656 -------VDANL---VREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 656 -------~~~~~---~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
+.... ...........+.+.++.+++.+|++.||++|||+.|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 233 CEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred hHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 00000 00000000111235678899999999999999999999863
No 195
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=2.4e-36 Score=305.34 Aligned_cols=248 Identities=29% Similarity=0.430 Sum_probs=200.0
Q ss_pred ccCCccccccccccEEEEEEEecCCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeee-ecCCeeEEEEEcc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSC-SNLDFKALVLEFM 505 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~-~~~~~~~lv~e~~ 505 (717)
.+|++.+.||+|+||.||+|..+ |+.||+|.+.... ..+.+.+|+.++++++|+|++++++++ .+....++||||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 57888999999999999999874 7889999886443 235688899999999999999999975 4556789999999
Q ss_pred CCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 506 PNGSLEKWLYSHN-YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 506 ~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
++++|.+++.... ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++.......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-- 156 (256)
T cd05082 83 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE----ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 156 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH----hCCEeccccchheEEEcCCCcEEecCCccceeccccC--
Confidence 9999999998653 34789999999999999999999 6789999999999999999999999999987653322
Q ss_pred eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchhh
Q 005040 585 VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVRE 663 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (717)
....++..|+|||+..+..++.++||||||+++|||++ |+.||..... .....++....+.
T Consensus 157 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~--~~~~~~~~~~~~~------------- 218 (256)
T cd05082 157 ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPRVEKGYKM------------- 218 (256)
T ss_pred ---CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHhcCCCC-------------
Confidence 12234668999999988889999999999999999998 9999864211 1111111111000
Q ss_pred hhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 005040 664 EQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKI 705 (717)
Q Consensus 664 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~ 705 (717)
.....++..+.+++.+|++.+|++|||+.++++.|+++
T Consensus 219 ----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 219 ----DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred ----CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 00113456788999999999999999999999998864
No 196
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.7e-36 Score=311.56 Aligned_cols=271 Identities=28% Similarity=0.417 Sum_probs=208.4
Q ss_pred ccCCccccccccccEEEEEEEec-----CCCeEEEEEechhhHH-HHHHHHHHHHHHHhcCCCceeeEeeeeec--CCee
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-----DGTNVAIKIFNLQLER-AFRSFDSECEILRNVRHRNLLKILGSCSN--LDFK 498 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~hpniv~~~~~~~~--~~~~ 498 (717)
.+|+..+.||+|+||.||+|++. ++..||||++...... ..+.+.+|+++++.++||||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 46777889999999999999863 3678999999765443 45788999999999999999999999877 5578
Q ss_pred EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeecccccc
Q 005040 499 ALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLL 578 (717)
Q Consensus 499 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 578 (717)
++||||+++++|.+++......+++..+..++.|++.||+||| +.+++|+||||+||+++.++.++|+|||.+...
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH----~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLG----SQRYIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred EEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 9999999999999999877666899999999999999999999 678999999999999999999999999999877
Q ss_pred CCCCCce-eeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhcc
Q 005040 579 GEGEDSV-IQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVD 657 (717)
Q Consensus 579 ~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (717)
....... ......++..|+|||...+..++.++||||||+++|||++|+.|+........ .+............+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~ 236 (284)
T cd05038 160 PEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFL---RMIGIAQGQMIVTRLL 236 (284)
T ss_pred ccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhc---cccccccccccHHHHH
Confidence 5332221 11123456679999998888999999999999999999999999754322111 0000000000000000
Q ss_pred ccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 005040 658 ANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKI 705 (717)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~ 705 (717)
..+. .....+....++.++.+++.+||+.+|++|||+.|+++.|+++
T Consensus 237 ~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 237 ELLK-EGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHH-cCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 0000 0001112234556789999999999999999999999999876
No 197
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2.9e-36 Score=307.12 Aligned_cols=252 Identities=23% Similarity=0.345 Sum_probs=190.1
Q ss_pred ccccccccEEEEEEEec---CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCCC
Q 005040 433 NLLGTGGFGSVYKGTLS---DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPNG 508 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 508 (717)
+.||+|+||.||+|... .+..+|+|.++... ......+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 36899999999999864 34578999886543 233356888999999999999999999999989999999999999
Q ss_pred CHHHHHhhCC----CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 509 SLEKWLYSHN----YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 509 ~L~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
+|.+++.... ...++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||++.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH----~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~ 156 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH----KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYY 156 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH----HCCEeccccCcceEEEcCCCcEEECCccccccccCccee
Confidence 9999997532 24567788889999999999999 678999999999999999999999999998754332222
Q ss_pred eeeeccccCccccCCCccCCC-------CcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhc
Q 005040 585 VIQTMTMATIGYMAPEYGSEG-------IVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVV 656 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~~-------~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (717)
.......++..|+|||++.+. .++.++||||||+++|||++ |+.||......+ ...+... .......
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~--~~~~~~~---~~~~~~~ 231 (269)
T cd05087 157 VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ--VLTYTVR---EQQLKLP 231 (269)
T ss_pred ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH--HHHHHhh---cccCCCC
Confidence 222334567889999987542 35789999999999999996 999996532221 1111100 0000111
Q ss_pred cccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 005040 657 DANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLR 703 (717)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~ 703 (717)
++.+. ...+..+.+++..|+ .+|++|||++||++.|+
T Consensus 232 ~~~~~---------~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 232 KPRLK---------LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCccC---------CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 11110 112345778999998 68999999999998874
No 198
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=3.2e-36 Score=305.19 Aligned_cols=252 Identities=27% Similarity=0.437 Sum_probs=202.1
Q ss_pred ccCCccccccccccEEEEEEEecCCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccC
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMP 506 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 506 (717)
++|++...||+|+||.||+|...++..+|+|.+.... ...+.+.+|+++++.++|||++++++++.. +..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEEEcCC
Confidence 5688889999999999999998777789999876432 233568889999999999999999998864 55799999999
Q ss_pred CCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCce
Q 005040 507 NGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSV 585 (717)
Q Consensus 507 ~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 585 (717)
+|+|.+++... ...+++..+..++.|++.||.||| +.+++|+||||+||++++++.++|+|||++.........
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH----~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~- 158 (260)
T cd05069 84 KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIE----RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT- 158 (260)
T ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH----hCCEeecccCcceEEEcCCCeEEECCCccceEccCCccc-
Confidence 99999999764 345789999999999999999999 678999999999999999999999999999766433211
Q ss_pred eeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhh
Q 005040 586 IQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREE 664 (717)
Q Consensus 586 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (717)
......++..|+|||+..+..++.++||||||+++|||++ |+.||.+.... ....+.......
T Consensus 159 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~~-------------- 222 (260)
T cd05069 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR--EVLEQVERGYRM-------------- 222 (260)
T ss_pred ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCC--------------
Confidence 1122345678999999988899999999999999999999 89998753221 111111111000
Q ss_pred hhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 005040 665 QAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRK 704 (717)
Q Consensus 665 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~ 704 (717)
+...+.+..+.+++.+||..+|++||+++++++.|++
T Consensus 223 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 223 ---PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred ---CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 0112345668899999999999999999999999875
No 199
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=3.2e-36 Score=305.70 Aligned_cols=253 Identities=27% Similarity=0.380 Sum_probs=205.2
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEcc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFM 505 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 505 (717)
++|+..+.||+|+||.||+|... +++.+|+|++........+.+.+|++++++++||||+++++++.+....+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 57888999999999999999875 67889999998665556678899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCce
Q 005040 506 PNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSV 585 (717)
Q Consensus 506 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 585 (717)
++++|.+++......+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++|+|||++........
T Consensus 83 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh----~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~-- 156 (262)
T cd06613 83 GGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLH----ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA-- 156 (262)
T ss_pred CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH----hCCceecCCChhhEEECCCCCEEECccccchhhhhhhh--
Confidence 999999999876556899999999999999999999 67899999999999999999999999999876543211
Q ss_pred eeeccccCccccCCCccCCC---CcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchh
Q 005040 586 IQTMTMATIGYMAPEYGSEG---IVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVR 662 (717)
Q Consensus 586 ~~~~~~~t~~y~aPE~~~~~---~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (717)
......++..|+|||...+. .++.++||||||+++|||++|+.||........ ........... ..
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~-~~~~~~~~~~~-------~~--- 225 (262)
T cd06613 157 KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA-LFLISKSNFPP-------PK--- 225 (262)
T ss_pred ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhccCCC-------cc---
Confidence 12234578889999988776 889999999999999999999999865322111 11100000000 00
Q ss_pred hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 663 EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 663 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.......+.++.+++.+||..+|.+|||+++++.
T Consensus 226 ----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 226 ----LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred ----ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0111234566889999999999999999999875
No 200
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=2.6e-36 Score=316.52 Aligned_cols=255 Identities=23% Similarity=0.284 Sum_probs=197.6
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
++|++.+.||+|+||.||++... +++.||+|++.+.. ....+.+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47889999999999999999975 68999999997532 233456788999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
||+++|+|.+++.+....+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++.......
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVH----QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH----hCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCC
Confidence 999999999999876666899999999999999999999 6889999999999999999999999999987654322
Q ss_pred CceeeeccccCccccCCCccCC-----CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhcc
Q 005040 583 DSVIQTMTMATIGYMAPEYGSE-----GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVD 657 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~~-----~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (717)
. .......||+.|+|||++.. ..++.++||||+||++|||++|+.||..... .+......... ...
T Consensus 157 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~-----~~~~~~i~~~~--~~~- 227 (331)
T cd05597 157 T-VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL-----VETYGKIMNHK--EHF- 227 (331)
T ss_pred C-ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH-----HHHHHHHHcCC--Ccc-
Confidence 2 11223468999999998763 4578899999999999999999999965211 11111110000 000
Q ss_pred ccchhhhhhhhhhHHHHHHHHHHHhhccCCCCC--CCCCHHHHHHH
Q 005040 658 ANLVREEQAFSDKMDCLFSIMDLALDCCMDTPH--KRIHMTDAAAK 701 (717)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~--~Rpt~~ev~~~ 701 (717)
.+. .....++.++.+++.+|+..+++ .||++.++++.
T Consensus 228 -~~~------~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 228 -QFP------PDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred -cCC------CccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 000 00112445678889887765433 37888888765
No 201
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=5.5e-37 Score=325.71 Aligned_cols=252 Identities=24% Similarity=0.355 Sum_probs=196.5
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
++|+..+.||+|+||.||+|... +++.||+|++.... ......+.+|+.++.+++||+|+++++++.+.+..|+||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36888999999999999999875 78999999997543 334466788999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
||+++|+|.+++.+.+ .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.++|+|||++.......
T Consensus 81 E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~~L~~lH----~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 81 EFLPGGDMMTLLMKKD-TLSEEATQFYIAETVLAIDAIH----QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred eCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeEccCCCHHHEEECCCCCEEEeeccCCccccccc
Confidence 9999999999998654 3889999999999999999999 6899999999999999999999999999987543211
Q ss_pred Cc---------------------------------eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCC
Q 005040 583 DS---------------------------------VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKP 629 (717)
Q Consensus 583 ~~---------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p 629 (717)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 00 001134689999999999999999999999999999999999999
Q ss_pred CCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCC---HHHHHH
Q 005040 630 TDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIH---MTDAAA 700 (717)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt---~~ev~~ 700 (717)
|....... ......... ..+ .++.....+.++.+++.+|+. ||.+|++ +.|+++
T Consensus 236 f~~~~~~~-----~~~~i~~~~------~~~-----~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~ 292 (360)
T cd05627 236 FCSETPQE-----TYRKVMNWK------ETL-----VFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKS 292 (360)
T ss_pred CCCCCHHH-----HHHHHHcCC------Cce-----ecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhc
Confidence 97532211 111000000 000 001111234557788888774 9999996 455543
No 202
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.5e-36 Score=317.16 Aligned_cols=241 Identities=23% Similarity=0.261 Sum_probs=193.3
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcC-CCceeeEeeeeecCCeeEEEE
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVR-HRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-hpniv~~~~~~~~~~~~~lv~ 502 (717)
+|+..+.||+|+||.||+|... +++.||+|++.... ....+.+..|.++++.+. |++|+++.+++.+.+..|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4677889999999999999875 78999999997653 233456778889998885 577888999999999999999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
||+++|+|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 81 Ey~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH----~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~ 155 (323)
T cd05615 81 EYVNGGDLMYHIQQVG-KFKEPQAVFYAAEISVGLFFLH----RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG 155 (323)
T ss_pred cCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHeEECCCCCEEEeccccccccCCCC
Confidence 9999999999997654 3899999999999999999999 6799999999999999999999999999987543221
Q ss_pred CceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchh
Q 005040 583 DSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVR 662 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (717)
. ......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ....+.+... . .
T Consensus 156 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~--~~~~~~i~~~---~--------~-- 218 (323)
T cd05615 156 V--TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE--DELFQSIMEH---N--------V-- 218 (323)
T ss_pred c--cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH--HHHHHHHHhC---C--------C--
Confidence 1 12334689999999999988999999999999999999999999976321 1111111110 0 0
Q ss_pred hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCH
Q 005040 663 EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHM 695 (717)
Q Consensus 663 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~ 695 (717)
..+..++.++.+++.+|++.+|.+|++.
T Consensus 219 -----~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 219 -----SYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred -----CCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 0011234567899999999999999985
No 203
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=4.7e-36 Score=303.42 Aligned_cols=248 Identities=29% Similarity=0.464 Sum_probs=198.3
Q ss_pred ccccccccEEEEEEEec--C--CCeEEEEEechhhH-HHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCC
Q 005040 433 NLLGTGGFGSVYKGTLS--D--GTNVAIKIFNLQLE-RAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPN 507 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~--~--~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 507 (717)
+.||+|+||.||+|.+. + +..+|+|.+..... ...+.+.+|+++++++.||||+++++++.. +..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEEeCCC
Confidence 47999999999999753 2 26899999875543 344678899999999999999999998764 467999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCcee-
Q 005040 508 GSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVI- 586 (717)
Q Consensus 508 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~- 586 (717)
|+|.+++.... .+++..+..++.|++.|++||| ..+++||||||+||+++.++.+||+|||+++..........
T Consensus 80 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh----~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~ 154 (257)
T cd05060 80 GPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLE----SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRA 154 (257)
T ss_pred CcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHh----hcCeeccCcccceEEEcCCCcEEeccccccceeecCCccccc
Confidence 99999998765 5899999999999999999999 67899999999999999999999999999987644332211
Q ss_pred eeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhh
Q 005040 587 QTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQ 665 (717)
Q Consensus 587 ~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (717)
.....++..|+|||...+..++.++||||||+++|||++ |+.||..... .....++....+.
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--~~~~~~~~~~~~~--------------- 217 (257)
T cd05060 155 TTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--AEVIAMLESGERL--------------- 217 (257)
T ss_pred ccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHHcCCcC---------------
Confidence 111223567999999988899999999999999999998 9999875322 2222222221100
Q ss_pred hhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 005040 666 AFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKI 705 (717)
Q Consensus 666 ~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~ 705 (717)
+....++..+.+++.+||..+|++||++.++++.|+++
T Consensus 218 --~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 218 --PRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred --CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 11123456788999999999999999999999999876
No 204
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.4e-36 Score=320.78 Aligned_cols=264 Identities=22% Similarity=0.228 Sum_probs=196.6
Q ss_pred HhccCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecC------
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNL------ 495 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~------ 495 (717)
..++|+..+.||+|+||.||+|... +|+.||+|++.... ......+.+|+.+++.++||||+++++++...
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 4578999999999999999999875 68999999986432 23345677899999999999999999988543
Q ss_pred CeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccc
Q 005040 496 DFKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGIS 575 (717)
Q Consensus 496 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 575 (717)
...|+||||+++ +|.+.+.. .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH----~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a 170 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM---ELDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLA 170 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc---cCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEEECCCCCEEEecCCCc
Confidence 357999999965 67776653 2788899999999999999999 689999999999999999999999999999
Q ss_pred cccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhh
Q 005040 576 KLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEV 655 (717)
Q Consensus 576 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (717)
+...... ......+|+.|+|||++.+..++.++||||+||++|||++|+.||...... ......... ......+.
T Consensus 171 ~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~-~~~~~~~~~-~~~~~~~~ 245 (359)
T cd07876 171 RTACTNF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHI-DQWNKVIEQ-LGTPSAEF 245 (359)
T ss_pred cccccCc---cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHh-cCCCcHHH
Confidence 7643221 123346799999999999999999999999999999999999999753211 111111111 00000000
Q ss_pred cc-----------c--cch-----hhhh------hhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 656 VD-----------A--NLV-----REEQ------AFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 656 ~~-----------~--~~~-----~~~~------~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
.+ . ... ...+ ........+.++.+++.+||+.||++|||+.|+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 246 MNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00 0 000 0000 000011124568899999999999999999999874
No 205
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.7e-36 Score=314.20 Aligned_cols=265 Identities=19% Similarity=0.263 Sum_probs=201.2
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
++|+..+.||+|+||.||+|..+ +++.||+|.+.... ......+.+|+++++.++||||+++++++.+....++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 57899999999999999999875 68899999986443 22234567899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
++ ++|.+++......+++..+..++.|+++||.||| +.+|+|+||||+||+++.++.++|+|||++........
T Consensus 86 ~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~- 159 (301)
T cd07873 86 LD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCH----RRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK- 159 (301)
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC-
Confidence 97 5999999876666899999999999999999999 68999999999999999999999999999876532221
Q ss_pred eeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCC----chhhhcccc
Q 005040 585 VIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPH----RLTEVVDAN 659 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 659 (717)
......+++.|+|||+..+ ..++.++||||+|+++|||++|+.||...... .....+...... .+....+..
T Consensus 160 -~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (301)
T cd07873 160 -TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE--EQLHFIFRILGTPTEETWPGILSNE 236 (301)
T ss_pred -cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHcCCCChhhchhhhccc
Confidence 1123356889999998755 45788999999999999999999999753221 111111111110 111111100
Q ss_pred ------chhhhhh--hhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 660 ------LVREEQA--FSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 660 ------~~~~~~~--~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
....... ......++.++.+++.+|++.||.+|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 237 EFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred cccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000000 0011234566889999999999999999999986
No 206
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=3e-36 Score=307.46 Aligned_cols=239 Identities=23% Similarity=0.335 Sum_probs=189.6
Q ss_pred cccccccEEEEEEEec-------------------------CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeE
Q 005040 434 LLGTGGFGSVYKGTLS-------------------------DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKI 488 (717)
Q Consensus 434 ~lg~G~~g~V~~~~~~-------------------------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~ 488 (717)
+||+|+||.||+|... ....||+|++..........+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 6999999999999742 113589999976665556678889999999999999999
Q ss_pred eeeeecCCeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC---
Q 005040 489 LGSCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENM--- 565 (717)
Q Consensus 489 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~--- 565 (717)
++++.+....++||||+++|+|..++......+++..+..++.|+++||+||| +.+|+||||||+||+++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLE----DKNLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----cCCccCCCCCcccEEEeccCccc
Confidence 99999999999999999999999999876667899999999999999999999 67999999999999997644
Q ss_pred ----cEEEeeeccccccCCCCCceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHH-hCCCCCCccccCcch
Q 005040 566 ----VAHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETF-TEKKPTDEMFTGEMS 639 (717)
Q Consensus 566 ----~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~-tg~~p~~~~~~~~~~ 639 (717)
.+|++|||++...... ....++..|+|||.+.+ ..++.++||||||+++||++ +|+.||......+
T Consensus 158 ~~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-- 229 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE-- 229 (274)
T ss_pred CccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH--
Confidence 4899999987643221 12346788999998765 56899999999999999985 6999986532211
Q ss_pred HHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 005040 640 LRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLR 703 (717)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~ 703 (717)
...+..... .+ +. ....++.+++.+||+.+|++|||+.++++.|+
T Consensus 230 ~~~~~~~~~----------~~-------~~--~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 230 KERFYEKKH----------RL-------PE--PSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HHHHHHhcc----------CC-------CC--CCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 111111100 00 00 11235789999999999999999999998773
No 207
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.9e-36 Score=326.39 Aligned_cols=264 Identities=19% Similarity=0.214 Sum_probs=199.0
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEcc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFM 505 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 505 (717)
.+|.+.+.||+|+||.||+|.+. .++.||||... ...+.+|++++++++||||+++++++...+..++|||++
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~ 242 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKY 242 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEcc
Confidence 46899999999999999999976 68889999632 234567999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCce
Q 005040 506 PNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSV 585 (717)
Q Consensus 506 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 585 (717)
. ++|.+++......+++..+..++.|+++||.||| +.+|+||||||+|||++.++.+||+|||+++.........
T Consensus 243 ~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH----~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~ 317 (461)
T PHA03211 243 R-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIH----GEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTP 317 (461)
T ss_pred C-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccc
Confidence 5 7999999876667999999999999999999999 6799999999999999999999999999998764332222
Q ss_pred eeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccC------cchHHHHHHhhCC--Cchhhhcc
Q 005040 586 IQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTG------EMSLRRWVKESLP--HRLTEVVD 657 (717)
Q Consensus 586 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~------~~~~~~~~~~~~~--~~~~~~~~ 657 (717)
......||+.|+|||++.+..++.++|||||||++|||++|..|+-..... ...+.+.+..... ........
T Consensus 318 ~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~ 397 (461)
T PHA03211 318 FHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAG 397 (461)
T ss_pred cccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcc
Confidence 223456899999999999999999999999999999999988764321111 1122222221100 00000000
Q ss_pred ccchhhh--------------hhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 658 ANLVREE--------------QAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 658 ~~~~~~~--------------~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
.++.... ...........++.+++.+||+.||++|||+.|+++.
T Consensus 398 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 398 SRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred hHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0000000 0000011223468899999999999999999999863
No 208
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.7e-36 Score=307.49 Aligned_cols=255 Identities=29% Similarity=0.468 Sum_probs=206.1
Q ss_pred HhccCCccccccccccEEEEEEEecCCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
..++|++.+.||+|+||.||+|..++++.||+|.+..... ..+.+.+|+.++++++||||+++++++.+....++||||
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 82 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY 82 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence 3468899999999999999999988888999999875432 235688899999999999999999999988899999999
Q ss_pred cCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 505 MPNGSLEKWLYSHN-YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 505 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
+++++|.+++.... ..+++..+..++.|++.|+.||| +.+++|+||||+||++++++.++++|||++........
T Consensus 83 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh----~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~ 158 (261)
T cd05034 83 MSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLE----SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEY 158 (261)
T ss_pred cCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCcchheEEEcCCCCEEECccccceeccchhh
Confidence 99999999998643 46899999999999999999999 67899999999999999999999999999887643221
Q ss_pred ceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchh
Q 005040 584 SVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVR 662 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (717)
. .......+..|+|||...+..++.++||||+|+++||+++ |+.||...... ...+.+.....
T Consensus 159 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~~~~~~~~~~------------- 222 (261)
T cd05034 159 T-AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR--EVLEQVERGYR------------- 222 (261)
T ss_pred h-hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCC-------------
Confidence 1 1112234568999999988889999999999999999999 99998653211 11111111000
Q ss_pred hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 005040 663 EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRK 704 (717)
Q Consensus 663 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~ 704 (717)
.+.+.+++.++.+++.+|++.+|++||+++++.+.|+.
T Consensus 223 ----~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 223 ----MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred ----CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 00111234568899999999999999999999999875
No 209
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=7e-37 Score=320.22 Aligned_cols=241 Identities=24% Similarity=0.301 Sum_probs=189.4
Q ss_pred ccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHH-HHHhcCCCceeeEeeeeecCCeeEEEEEccCC
Q 005040 433 NLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECE-ILRNVRHRNLLKILGSCSNLDFKALVLEFMPN 507 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 507 (717)
+.||+|+||.||+|+.. +|+.||+|++.... ......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999865 78999999997553 223344555554 56778999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceee
Q 005040 508 GSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQ 587 (717)
Q Consensus 508 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 587 (717)
|+|..++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++........ ..
T Consensus 81 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH----~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~--~~ 153 (325)
T cd05604 81 GELFFHLQRER-SFPEPRARFYAAEIASALGYLH----SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD--TT 153 (325)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCC--Cc
Confidence 99999887654 4899999999999999999999 68999999999999999999999999999875322211 12
Q ss_pred eccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhh
Q 005040 588 TMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAF 667 (717)
Q Consensus 588 ~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (717)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... +....... ....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-----~~~~~~~~--------~~~~------ 214 (325)
T cd05604 154 TTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA-----EMYDNILH--------KPLV------ 214 (325)
T ss_pred ccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH-----HHHHHHHc--------CCcc------
Confidence 3446899999999999999999999999999999999999999653211 11111100 0000
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 668 SDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 668 ~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.....+..+.+++.+|++.+|.+||++.+.++
T Consensus 215 -~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~ 246 (325)
T cd05604 215 -LRPGASLTAWSILEELLEKDRQRRLGAKEDFL 246 (325)
T ss_pred -CCCCCCHHHHHHHHHHhccCHHhcCCCCCCHH
Confidence 00123355779999999999999998864333
No 210
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.1e-36 Score=329.93 Aligned_cols=262 Identities=23% Similarity=0.286 Sum_probs=192.0
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecC--------C
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNL--------D 496 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~--------~ 496 (717)
..+|++.+.||+|+||.||+|... +++.||||++.... ....+|+.+++.++||||+++++++... .
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 467999999999999999999875 78899999885432 2234699999999999999998876332 2
Q ss_pred eeEEEEEccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC-cEEEeee
Q 005040 497 FKALVLEFMPNGSLEKWLYS---HNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENM-VAHVSDF 572 (717)
Q Consensus 497 ~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~-~~kl~Df 572 (717)
..++||||++ ++|.+++.. ....+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+||
T Consensus 141 ~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH----~~~IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 141 FLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH----SKFICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred EEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCEecCCcCHHHEEEcCCCCceeeecc
Confidence 4679999997 478777753 3456899999999999999999999 68899999999999999665 7999999
Q ss_pred ccccccCCCCCceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCc
Q 005040 573 GISKLLGEGEDSVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHR 651 (717)
Q Consensus 573 gl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 651 (717)
|+++.+..... .....||+.|+|||++.+ ..++.++||||+||++|||++|++||.+.... ..+.+.+.......
T Consensus 216 Gla~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~-~~~~~i~~~~~~p~ 291 (440)
T PTZ00036 216 GSAKNLLAGQR---SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV-DQLVRIIQVLGTPT 291 (440)
T ss_pred ccchhccCCCC---cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCC
Confidence 99987643322 123467999999998765 46899999999999999999999999763221 12222211111100
Q ss_pred hhh--hccc--------cchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 652 LTE--VVDA--------NLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 652 ~~~--~~~~--------~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
... ...+ ......-...-+...+.++.+++.+||..||.+|||+.|+++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 292 EDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred HHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 000 0000 000000000001123467899999999999999999999884
No 211
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.7e-36 Score=312.89 Aligned_cols=249 Identities=22% Similarity=0.301 Sum_probs=203.3
Q ss_pred ccCCccccccccccEEEEEEEe-cCCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEcc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTL-SDGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFM 505 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 505 (717)
.+|+..+.||.|+||.||+|.. .+++.||+|.+........+.+.+|+++++.++|||++++++++.+.+..++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 4688999999999999999986 478999999987655445567888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCce
Q 005040 506 PNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSV 585 (717)
Q Consensus 506 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 585 (717)
++++|.+++... .+++.++..++.|++.|++||| +.+++||||||+||+++.++.+||+|||++.........
T Consensus 99 ~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH----~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~- 171 (296)
T cd06655 99 AGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLH----ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSK- 171 (296)
T ss_pred CCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEEccCccchhccccccc-
Confidence 999999998764 3899999999999999999999 689999999999999999999999999998765432211
Q ss_pred eeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhh
Q 005040 586 IQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQ 665 (717)
Q Consensus 586 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (717)
.....++..|+|||...+..++.++|||||||++|+|++|+.||........ ...........
T Consensus 172 -~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~--~~~~~~~~~~~-------------- 234 (296)
T cd06655 172 -RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA--LYLIATNGTPE-------------- 234 (296)
T ss_pred -CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHhcCCcc--------------
Confidence 2234678899999999888899999999999999999999999965322111 11111100000
Q ss_pred hhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 666 AFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 666 ~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
......++..+.++|.+||..||++||++.++++
T Consensus 235 -~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 235 -LQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred -cCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0111234456889999999999999999999875
No 212
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.8e-36 Score=313.02 Aligned_cols=250 Identities=22% Similarity=0.286 Sum_probs=203.6
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
..+|+..+.||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 478999999999999999999864 7999999998765544456788899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
+++++|.+++.+.. +++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++.........
T Consensus 98 ~~~~~L~~~~~~~~--~~~~~~~~~~~~l~~~L~~LH----~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~ 171 (297)
T cd06656 98 LAGGSLTDVVTETC--MDEGQIAAVCRECLQALDFLH----SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 171 (297)
T ss_pred cCCCCHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccC
Confidence 99999999997643 788999999999999999999 678999999999999999999999999998765432211
Q ss_pred eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhh
Q 005040 585 VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREE 664 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (717)
.....+++.|+|||...+..++.++|+||||+++|++++|+.||............+. .. .
T Consensus 172 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~-----~~------------~ 232 (297)
T cd06656 172 --RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-----NG------------T 232 (297)
T ss_pred --cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeecc-----CC------------C
Confidence 2334678899999999888899999999999999999999999965321110000000 00 0
Q ss_pred hhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 665 QAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 665 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
+........+..+.+++.+||..+|++||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 233 PELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000111233456789999999999999999999987
No 213
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.6e-36 Score=325.35 Aligned_cols=265 Identities=21% Similarity=0.198 Sum_probs=200.9
Q ss_pred hccCCccccccccccEEEEEEEec---CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS---DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
..+|++.+.||+|+||.||++... .++.||+|.+... ....+|++++++++||||+++++++......++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 457999999999999999999753 4578999987643 23457999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
|++. ++|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.++|+|||+++......
T Consensus 166 e~~~-~~l~~~l~~~-~~l~~~~~~~i~~ql~~aL~~LH----~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~ 239 (392)
T PHA03207 166 PKYK-CDLFTYVDRS-GPLPLEQAITIQRRLLEALAYLH----GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHP 239 (392)
T ss_pred hhcC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCCHHHEEEcCCCCEEEccCccccccCccc
Confidence 9995 6899998543 45899999999999999999999 6789999999999999999999999999998765443
Q ss_pred CceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCc--chHHHHHHhhC--CCchhh----
Q 005040 583 DSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGE--MSLRRWVKESL--PHRLTE---- 654 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~--~~~~~~~~~~~--~~~~~~---- 654 (717)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||.+..... ..+...+.... +.....
T Consensus 240 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~ 319 (392)
T PHA03207 240 DTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGST 319 (392)
T ss_pred ccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccch
Confidence 3333344578999999999999999999999999999999999999986533221 11111111110 000000
Q ss_pred hccccc-------hhh--hhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 655 VVDANL-------VRE--EQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 655 ~~~~~~-------~~~--~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
.+...+ ... .+.......++.++.++|.+|+..||++|||+.|++..
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 320 NLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred hHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000 000 00000011234568899999999999999999999864
No 214
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2.5e-36 Score=309.29 Aligned_cols=249 Identities=24% Similarity=0.307 Sum_probs=198.0
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
++|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 36788899999999999999864 78999999986543 33446788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
+++++|..+. .+++..+..++.|++.|+.||| +.+|+|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~-- 149 (279)
T cd06619 81 MDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLW----SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI-- 149 (279)
T ss_pred CCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHH----HCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc--
Confidence 9999997652 3688889999999999999999 6899999999999999999999999999997654322
Q ss_pred eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchH--HHHHHhhCCCchhhhccccchh
Q 005040 585 VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSL--RRWVKESLPHRLTEVVDANLVR 662 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 662 (717)
.....++..|+|||++.+..++.++||||||+++|||++|+.||.......... ..+........ .+.+
T Consensus 150 --~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-- 220 (279)
T cd06619 150 --AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED-----PPVL-- 220 (279)
T ss_pred --ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC-----CCCC--
Confidence 233468999999999999899999999999999999999999997533221110 01110000000 0000
Q ss_pred hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 663 EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 663 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
.....+.++.+++.+|++.+|++||+++|+++.
T Consensus 221 ------~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 221 ------PVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred ------CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 011234567899999999999999999999864
No 215
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=6.6e-36 Score=303.87 Aligned_cols=251 Identities=24% Similarity=0.390 Sum_probs=200.8
Q ss_pred cCCccccccccccEEEEEEEecCCCeEEEEEechhh------HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEE
Q 005040 428 EFNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQL------ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALV 501 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv 501 (717)
+|+..+.||+|+||.||+|...+++.+|+|.+.... ......+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 477889999999999999998889999999886431 23345688999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCC
Q 005040 502 LEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEG 581 (717)
Q Consensus 502 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 581 (717)
+||+++++|.+++.+.. .+++..+..++.|++.|++||| +.+++|+||+|+||++++++.++|+|||++......
T Consensus 81 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 81 MEFVPGGSISSILNRFG-PLPEPVFCKYTKQILDGVAYLH----NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWV 155 (265)
T ss_pred EecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhc
Confidence 99999999999998654 3789999999999999999999 678999999999999999999999999998765321
Q ss_pred CC----ceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhcc
Q 005040 582 ED----SVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVD 657 (717)
Q Consensus 582 ~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (717)
.. ........++..|+|||+..+..++.++||||+|+++|||++|+.||....... ... ..... .. ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-~~~-~~~~~--~~----~~ 227 (265)
T cd06631 156 GLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA-AMF-YIGAH--RG----LM 227 (265)
T ss_pred cccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH-HHH-Hhhhc--cC----CC
Confidence 11 111223458899999999998889999999999999999999999996532111 110 00000 00 00
Q ss_pred ccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 658 ANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
+.. ...++.++.+++++||+.+|++||++.|+++
T Consensus 228 ~~~---------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 228 PRL---------PDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CCC---------CCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 001 1124456789999999999999999999875
No 216
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=2.3e-36 Score=316.92 Aligned_cols=255 Identities=21% Similarity=0.264 Sum_probs=198.3
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
++|++.+.||+|+||.||+++.. +++.||+|++.... ......+.+|..++..++|++|+++++++.+.+..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47889999999999999999975 78889999987532 233455788999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
||+++|+|.+++......+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH----~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIH----QLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH----HCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCC
Confidence 999999999999876556899999999999999999999 6899999999999999999999999999998764332
Q ss_pred CceeeeccccCccccCCCccCC-----CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhcc
Q 005040 583 DSVIQTMTMATIGYMAPEYGSE-----GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVD 657 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~~-----~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (717)
. .......||+.|+|||++.+ +.++.++|||||||++|||++|+.||...... ..........
T Consensus 157 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~-----~~~~~i~~~~------ 224 (331)
T cd05624 157 T-VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV-----ETYGKIMNHE------ 224 (331)
T ss_pred c-eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHH-----HHHHHHHcCC------
Confidence 2 12233568999999998765 56789999999999999999999999652211 1111100000
Q ss_pred ccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 005040 658 ANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHK--RIHMTDAAAK 701 (717)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~--Rpt~~ev~~~ 701 (717)
.++. .+ ....+.+.++.+++.+|+..++++ |++++++++.
T Consensus 225 ~~~~--~p--~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 225 ERFQ--FP--SHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred Cccc--CC--CccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 0000 00 001123466889999999866544 4578877653
No 217
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.5e-36 Score=317.49 Aligned_cols=258 Identities=23% Similarity=0.403 Sum_probs=204.5
Q ss_pred ccCCccccccccccEEEEEEEec--------CCCeEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCC
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS--------DGTNVAIKIFNLQL-ERAFRSFDSECEILRNV-RHRNLLKILGSCSNLD 496 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~ 496 (717)
.+|++.+.||+|+||.||+|... .+..||+|.+.... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 46889999999999999999742 12368999887543 33456788999999999 7999999999999999
Q ss_pred eeEEEEEccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeee
Q 005040 497 FKALVLEFMPNGSLEKWLYSHN---------------YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILL 561 (717)
Q Consensus 497 ~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill 561 (717)
..++|+||+++|+|.+++.... ..+++.++..++.|++.||+||| +.+++||||||+||++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH----~~givH~dlkp~Nill 167 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA----SQKCIHRDLAARNVLV 167 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH----HCCeeccccccceEEE
Confidence 9999999999999999997532 24788899999999999999999 6899999999999999
Q ss_pred CCCCcEEEeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchH
Q 005040 562 DENMVAHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSL 640 (717)
Q Consensus 562 ~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~ 640 (717)
+.++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||.....
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~----- 242 (334)
T cd05100 168 TEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV----- 242 (334)
T ss_pred cCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH-----
Confidence 9999999999999986643322221222234567999999999999999999999999999998 8888865321
Q ss_pred HHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHH
Q 005040 641 RRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKA 707 (717)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~ 707 (717)
..+......... ......++.++.+++.+|++.+|++||++.|+++.|+++..
T Consensus 243 ~~~~~~~~~~~~--------------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 243 EELFKLLKEGHR--------------MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295 (334)
T ss_pred HHHHHHHHcCCC--------------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence 111111100000 00111334568899999999999999999999999998864
No 218
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2.9e-36 Score=316.36 Aligned_cols=255 Identities=22% Similarity=0.274 Sum_probs=198.1
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
++|++.+.||+|+||.||+++.+ +++.||+|++.+.. ......+..|+.++..++|++|+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 47889999999999999999976 67889999986532 223345788999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
||+++|+|.+++.+....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH----~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVH----QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCHHHEEECCCCCEEEeecchheecccCC
Confidence 999999999999876566899999999999999999999 6889999999999999999999999999987653322
Q ss_pred CceeeeccccCccccCCCccC-----CCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhcc
Q 005040 583 DSVIQTMTMATIGYMAPEYGS-----EGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVD 657 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~-----~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (717)
. .......||+.|+|||++. ...++.++|||||||++|||++|+.||..... ............ .
T Consensus 157 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~-----~~~~~~i~~~~~-~--- 226 (332)
T cd05623 157 T-VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL-----VETYGKIMNHKE-R--- 226 (332)
T ss_pred c-ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH-----HHHHHHHhCCCc-c---
Confidence 1 1223456899999999875 35688999999999999999999999965311 111111100000 0
Q ss_pred ccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 005040 658 ANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHK--RIHMTDAAAK 701 (717)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~--Rpt~~ev~~~ 701 (717)
..+. .....++.++.+++.+|+..+|.. |+++.|+++.
T Consensus 227 ~~~p------~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 227 FQFP------AQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred ccCC------CccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 0000 001134566789999988654443 6889988766
No 219
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=2.4e-36 Score=305.29 Aligned_cols=249 Identities=20% Similarity=0.272 Sum_probs=201.4
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEcc
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFM 505 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 505 (717)
+|++.+.||+|+||.||++... +++.+|+|.++... ....+.+..|+.+++.++||||+++++++.+.+..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4778899999999999999975 78899999886432 334567788999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 506 PNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 506 ~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
++|+|.+++... ...+++..+..++.|++.||.||| +.+++|+||||+||++++++.++++|||.+........
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH----~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~- 155 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIH----EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA- 155 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHh----hCCcccCCCCcceEEECCCCcEEEcccCcceeeccccc-
Confidence 999999998753 445789999999999999999999 68999999999999999999999999999876543221
Q ss_pred eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhh
Q 005040 585 VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREE 664 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (717)
......+++.|+|||+..+..++.++|+||||+++|+|++|+.||..... .............
T Consensus 156 -~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~----------- 218 (255)
T cd08219 156 -YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW-----KNLILKVCQGSYK----------- 218 (255)
T ss_pred -ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH-----HHHHHHHhcCCCC-----------
Confidence 12234688899999999888899999999999999999999999975211 1111111000000
Q ss_pred hhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 665 QAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 665 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
+.+..++..+.+++.+||+.||++||++.+++..
T Consensus 219 ---~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 219 ---PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ---CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 0011234567899999999999999999999864
No 220
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=5.3e-36 Score=302.92 Aligned_cols=251 Identities=27% Similarity=0.426 Sum_probs=202.5
Q ss_pred ccCCccccccccccEEEEEEEecCCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccC
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMP 506 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 506 (717)
.+|+..+.||+|+||.||+|.+.+++.+|+|.+..... ....+.+|++++++++|||++++++++.+....++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 47788899999999999999987788999998864432 23568889999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCcee
Q 005040 507 NGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVI 586 (717)
Q Consensus 507 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~ 586 (717)
+++|.+++......+++..+..++.|++.|++||| +.+++|+||||+||+++.++.++|+|||.+......... .
T Consensus 83 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH----~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~-~ 157 (256)
T cd05112 83 HGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLE----SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT-S 157 (256)
T ss_pred CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH----HCCccccccccceEEEcCCCeEEECCCcceeecccCccc-c
Confidence 99999999876666899999999999999999999 678999999999999999999999999998765432211 1
Q ss_pred eeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhh
Q 005040 587 QTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQ 665 (717)
Q Consensus 587 ~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (717)
.....++.+|+|||+..++.++.++||||||+++|||++ |+.||...... .......... ....+
T Consensus 158 ~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~-----~~~~~------- 223 (256)
T cd05112 158 STGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS--EVVETINAGF-----RLYKP------- 223 (256)
T ss_pred cCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH--HHHHHHhCCC-----CCCCC-------
Confidence 122335678999999988899999999999999999998 99998653211 1111111000 00000
Q ss_pred hhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 005040 666 AFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKL 702 (717)
Q Consensus 666 ~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L 702 (717)
...+..+.+++.+||+.+|++|||+.|+++.|
T Consensus 224 -----~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 224 -----RLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred -----CCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 11235688999999999999999999999886
No 221
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=3.6e-36 Score=305.30 Aligned_cols=252 Identities=26% Similarity=0.434 Sum_probs=194.7
Q ss_pred ccccccccEEEEEEEec----CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeee-cCCeeEEEEEccC
Q 005040 433 NLLGTGGFGSVYKGTLS----DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCS-NLDFKALVLEFMP 506 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~-~~~~~~lv~e~~~ 506 (717)
+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|+.+++.++||||+++++++. ..+..++||||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 36899999999999853 34579999885432 344567888999999999999999999765 4556789999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCce-
Q 005040 507 NGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSV- 585 (717)
Q Consensus 507 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~- 585 (717)
+|+|.+++.......++..+..++.|++.|++||| +.+++||||||+||++++++.+||+|||+++.........
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 156 (262)
T cd05058 81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLA----SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSV 156 (262)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----hCCccccccCcceEEEcCCCcEEECCccccccccCCcceee
Confidence 99999999876655788888999999999999999 6789999999999999999999999999987653321111
Q ss_pred -eeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhC-CCCCCccccCcchHHHHHHhhCCCchhhhccccchhh
Q 005040 586 -IQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTE-KKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVRE 663 (717)
Q Consensus 586 -~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (717)
......++..|+|||+..+..++.++||||||+++|||++| .+||..... ...........+
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~--~~~~~~~~~~~~-------------- 220 (262)
T cd05058 157 HNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS--FDITVYLLQGRR-------------- 220 (262)
T ss_pred cccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHhcCCC--------------
Confidence 11223457789999998888899999999999999999995 555543211 111111111000
Q ss_pred hhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHH
Q 005040 664 EQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKA 707 (717)
Q Consensus 664 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~ 707 (717)
...+..++..+.+++.+||..+|++||++.|+++.|+++..
T Consensus 221 ---~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 221 ---LLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred ---CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 00011234568899999999999999999999999998753
No 222
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=5.3e-36 Score=307.66 Aligned_cols=249 Identities=23% Similarity=0.287 Sum_probs=197.9
Q ss_pred CCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 429 FNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 429 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
|+..+.||+|+||+||+|... +++.||+|.+.... ......+.+|+++++.++|++|+.+.+++.+.+..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 667789999999999999875 78999999986543 22234577899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 505 MPNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 505 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
+++++|.+++... ...+++..+..++.|++.||.||| +.+|+||||||+||++++++.++|+|||++........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH----~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 157 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLH----RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES 157 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCc
Confidence 9999999988754 345899999999999999999999 68999999999999999999999999999876532211
Q ss_pred ceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhh
Q 005040 584 SVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVRE 663 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (717)
.....|+..|+|||++.+..++.++|+||+|+++|||++|+.||....... ....+ ........ ..
T Consensus 158 ---~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~-~~~~~-~~~~~~~~-----~~---- 223 (285)
T cd05632 158 ---IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV-KREEV-DRRVLETE-----EV---- 223 (285)
T ss_pred ---ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH-HHHHH-HHhhhccc-----cc----
Confidence 123468999999999988899999999999999999999999997532211 11111 11100000 00
Q ss_pred hhhhhhhHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 005040 664 EQAFSDKMDCLFSIMDLALDCCMDTPHKRIH-----MTDAAA 700 (717)
Q Consensus 664 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt-----~~ev~~ 700 (717)
....++.++.+++..|++.||++||+ +.++++
T Consensus 224 -----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 224 -----YSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred -----cCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 01123456789999999999999999 556655
No 223
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=4.4e-36 Score=308.13 Aligned_cols=249 Identities=24% Similarity=0.316 Sum_probs=198.8
Q ss_pred CCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 429 FNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 429 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
|+..+.||+|+||.||+|... +++.||+|.+.... ......+.+|+.++++++|++++.+++.+.+.+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 667789999999999999875 78999999987543 22234567899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 505 MPNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 505 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
+++++|.+++... ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.++|+|||++........
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH----~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLH----QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 157 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH----hCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc
Confidence 9999999998643 335899999999999999999999 68999999999999999999999999999876532221
Q ss_pred ceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhh
Q 005040 584 SVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVRE 663 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (717)
.....|+..|+|||++.+..++.++||||+|+++|||++|+.||....... ..... .. ..+. ...
T Consensus 158 ---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~-~~~~~-~~--------~~~~-~~~- 222 (285)
T cd05630 158 ---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KREEV-ER--------LVKE-VQE- 222 (285)
T ss_pred ---ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc-hHHHH-Hh--------hhhh-hhh-
Confidence 123468999999999999999999999999999999999999997532211 00010 00 0000 000
Q ss_pred hhhhhhhHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 005040 664 EQAFSDKMDCLFSIMDLALDCCMDTPHKRIH-----MTDAAA 700 (717)
Q Consensus 664 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt-----~~ev~~ 700 (717)
.....++.++.+++.+||+.||++||| ++|+++
T Consensus 223 ----~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 223 ----EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred ----hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 011134456889999999999999999 788876
No 224
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.5e-36 Score=307.73 Aligned_cols=252 Identities=31% Similarity=0.430 Sum_probs=198.7
Q ss_pred CCccccccccccEEEEEEEec-CCCeEEEEEechhhHHH--HHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEcc
Q 005040 429 FNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERA--FRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFM 505 (717)
Q Consensus 429 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 505 (717)
|++.+.||+|+||+||++... +++.||+|++....... ......|+.++++++||||+++++++.+....++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 567889999999999999976 66789999997665322 223456999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCce
Q 005040 506 PNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSV 585 (717)
Q Consensus 506 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 585 (717)
++++|.+++... ..+++..+..++.|+++||.||| +.+++|+||||+||+++.++.++|+|||.+..... ...
T Consensus 81 ~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~Lh----~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~--~~~ 153 (260)
T PF00069_consen 81 PGGSLQDYLQKN-KPLSEEEILKIAYQILEALAYLH----SKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSE--NNE 153 (260)
T ss_dssp TTEBHHHHHHHH-SSBBHHHHHHHHHHHHHHHHHHH----HTTEEESSBSGGGEEESTTSEEEESSGTTTEESTS--TTS
T ss_pred cccccccccccc-ccccccccccccccccccccccc----ccccccccccccccccccccccccccccccccccc--ccc
Confidence 999999999833 33899999999999999999999 57899999999999999999999999999976421 122
Q ss_pred eeeccccCccccCCCccC-CCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhh
Q 005040 586 IQTMTMATIGYMAPEYGS-EGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREE 664 (717)
Q Consensus 586 ~~~~~~~t~~y~aPE~~~-~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (717)
......++..|+|||+.. +..++.++||||+|+++|+|++|+.||..... ........... .......
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~--~~~~~~~~~~~--------~~~~~~~- 222 (260)
T PF00069_consen 154 NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNS--DDQLEIIEKIL--------KRPLPSS- 222 (260)
T ss_dssp EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSH--HHHHHHHHHHH--------HTHHHHH-
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccc--hhhhhhhhhcc--------ccccccc-
Confidence 334556899999999988 88899999999999999999999999976410 01111111100 0000000
Q ss_pred hhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 665 QAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 665 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.........++.+++.+||+.||++||++.++++
T Consensus 223 --~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 223 --SQQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp --TTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred --ccccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0000111267899999999999999999999975
No 225
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.7e-36 Score=316.86 Aligned_cols=237 Identities=25% Similarity=0.303 Sum_probs=186.9
Q ss_pred ccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHH-HHHHhcCCCceeeEeeeeecCCeeEEEEEccCC
Q 005040 433 NLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSEC-EILRNVRHRNLLKILGSCSNLDFKALVLEFMPN 507 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~-~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 507 (717)
+.||+|+||.||+|+.. +++.||+|++.... ......+.+|. .+++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999975 78899999997543 22233455554 467889999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceee
Q 005040 508 GSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQ 587 (717)
Q Consensus 508 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 587 (717)
|+|..++.... .+++..+..++.||++||.||| +.+|+||||||+||+++.++.+||+|||++........ ..
T Consensus 81 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~lH----~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~--~~ 153 (321)
T cd05603 81 GELFFHLQRER-CFLEPRARFYAAEVASAIGYLH----SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEE--TT 153 (321)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCC--cc
Confidence 99998887643 4788889999999999999999 67899999999999999999999999999875322211 12
Q ss_pred eccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhh
Q 005040 588 TMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAF 667 (717)
Q Consensus 588 ~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (717)
....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ........... . ..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~i~~~~--------~-----~~ 215 (321)
T cd05603 154 STFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV-----SQMYDNILHKP--------L-----QL 215 (321)
T ss_pred ccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH-----HHHHHHHhcCC--------C-----CC
Confidence 344689999999999988999999999999999999999999965311 11111111000 0 00
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCCCHH
Q 005040 668 SDKMDCLFSIMDLALDCCMDTPHKRIHMT 696 (717)
Q Consensus 668 ~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ 696 (717)
+...+.++.+++.+|++.||++||++.
T Consensus 216 --~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 216 --PGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred --CCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 012235578999999999999999864
No 226
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.4e-36 Score=310.32 Aligned_cols=255 Identities=24% Similarity=0.306 Sum_probs=204.4
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
++|++.+.||+|+||+||+|... +++.||+|++.... ......+.+|+++++.++||||+++++++.+....++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 57888899999999999999865 68899999886543 33456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
+++++|.+++...+ .+++..+..++.+++.|+.|||+ ..+++||||+|+||+++.++.++|+|||++.......
T Consensus 85 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~---~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~-- 158 (284)
T cd06620 85 MDCGSLDRIYKKGG-PIPVEILGKIAVAVVEGLTYLYN---VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI-- 158 (284)
T ss_pred CCCCCHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHH---hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc--
Confidence 99999999987654 48999999999999999999995 3579999999999999999999999999986542211
Q ss_pred eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcc------hHHHHHHhhCCCchhhhccc
Q 005040 585 VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEM------SLRRWVKESLPHRLTEVVDA 658 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 658 (717)
.....++..|+|||++.+..++.++|||||||++||+++|+.||......+. ....+......
T Consensus 159 --~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 227 (284)
T cd06620 159 --ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQ--------- 227 (284)
T ss_pred --cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhh---------
Confidence 1234688999999998888999999999999999999999999976432210 01111111110
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 005040 659 NLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKL 702 (717)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L 702 (717)
...+.. ...+++.++.+++.+|++.||++|||+.|+++..
T Consensus 228 ---~~~~~~-~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 228 ---EPPPRL-PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred ---ccCCCC-CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 000000 1113556788999999999999999999999864
No 227
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=8e-36 Score=302.27 Aligned_cols=253 Identities=23% Similarity=0.423 Sum_probs=204.4
Q ss_pred hccCCccccccccccEEEEEEEecCCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEcc
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFM 505 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 505 (717)
.++|+..+.||+|+||.||+|...++..+|+|.+.... ...+.+.+|+++++.++|+||+++++++.+ ...+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM 82 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence 46788999999999999999998778889999887543 234678889999999999999999999887 7789999999
Q ss_pred CCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 506 PNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 506 ~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
++++|.+++... ....++..+..++.|++.||.||| +.+++|+||+|+||+++.++.+||+|||.+.........
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH----~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 158 (260)
T cd05073 83 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE----QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 158 (260)
T ss_pred CCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHH----hCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcc
Confidence 999999999863 445788999999999999999999 578999999999999999999999999998765432211
Q ss_pred eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchhh
Q 005040 585 VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVRE 663 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (717)
......++..|+|||++..+.++.++|+||||+++|++++ |+.||..... .....+.......
T Consensus 159 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~--~~~~~~~~~~~~~------------- 222 (260)
T cd05073 159 -AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--PEVIRALERGYRM------------- 222 (260)
T ss_pred -cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHhCCCCC-------------
Confidence 1122345677999999988889999999999999999999 8999865321 1222222211100
Q ss_pred hhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 005040 664 EQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRK 704 (717)
Q Consensus 664 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~ 704 (717)
+.....+.++.+++.+|++.+|++||++.++.+.|+.
T Consensus 223 ----~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 223 ----PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ----CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0111334568899999999999999999999999875
No 228
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=4.3e-36 Score=308.75 Aligned_cols=265 Identities=25% Similarity=0.309 Sum_probs=197.9
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
+|+..+.||+|+||.||+|..+ +++.||+|++.... ......+.+|+.++++++||||+++++++.++...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4788899999999999999975 78999999886543 22335678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 505 MPNGSLEKWLYSHN--YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 505 ~~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
++ ++|.+++.... ..+++..+..++.|+++||.||| +.+++||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH----~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCH----SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHH----hCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence 97 68999887532 45899999999999999999999 6789999999999999999999999999987654322
Q ss_pred CceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCC---ch---hhh
Q 005040 583 DSVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPH---RL---TEV 655 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---~~---~~~ 655 (717)
.......+++.|+|||+..+ ..++.++||||||+++|||+||+.||....... ............ .+ ...
T Consensus 156 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 232 (285)
T cd07861 156 --RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEID-QLFRIFRILGTPTEDVWPGVTSL 232 (285)
T ss_pred --ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCCChhhhhcchhh
Confidence 11233456889999998765 457899999999999999999999997532211 111111100000 00 000
Q ss_pred cc--ccchhhh--hhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 656 VD--ANLVREE--QAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 656 ~~--~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.+ ....... ........++.++.+++.+||..||++|||+.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 233 PDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred HHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00 0000000 000011124567889999999999999999999875
No 229
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.8e-36 Score=309.27 Aligned_cols=252 Identities=24% Similarity=0.323 Sum_probs=198.3
Q ss_pred HHhccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhc-CCCceeeEeeeeecC------
Q 005040 424 RATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNV-RHRNLLKILGSCSNL------ 495 (717)
Q Consensus 424 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~------ 495 (717)
.+.+.|+..+.||+|+||.||+|... +++.||+|++..... ....+.+|+.+++++ +||||+++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc-cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 45678899999999999999999865 688999999865432 235678899999998 699999999998642
Q ss_pred CeeEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeecc
Q 005040 496 DFKALVLEFMPNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGI 574 (717)
Q Consensus 496 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 574 (717)
...++||||+.+++|.+++... ...+++..+..++.|++.|++||| +.+|+|+||+|+||++++++.++|+|||+
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH----~~~ivh~dl~~~nili~~~~~~~l~Dfg~ 157 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH----QHKVIHRDIKGQNVLLTENAEVKLVDFGV 157 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH----HCCCccCCCCHHHEEECCCCCEEEccCCC
Confidence 4679999999999999999864 345899999999999999999999 67899999999999999999999999999
Q ss_pred ccccCCCCCceeeeccccCccccCCCccC-----CCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCC
Q 005040 575 SKLLGEGEDSVIQTMTMATIGYMAPEYGS-----EGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLP 649 (717)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~-----~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 649 (717)
+........ ......|+..|+|||++. +..++.++|||||||++|||++|+.||....... ...... .
T Consensus 158 ~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~----~~~~~~-~ 230 (272)
T cd06637 158 SAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR----ALFLIP-R 230 (272)
T ss_pred ceecccccc--cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHH----HHHHHh-c
Confidence 876533211 123346889999999875 3468889999999999999999999986532211 111000 0
Q ss_pred CchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 650 HRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.. .... ....++.++.+++.+||..+|.+|||+.|+++
T Consensus 231 ~~-----~~~~--------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 231 NP-----APRL--------KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred CC-----CCCC--------CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 00 0000 01123456889999999999999999999875
No 230
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=3.4e-36 Score=306.78 Aligned_cols=248 Identities=28% Similarity=0.478 Sum_probs=197.1
Q ss_pred ccccccccEEEEEEEecC-------CCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 433 NLLGTGGFGSVYKGTLSD-------GTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
+.||+|+||.||+|+..+ ++.+|+|.+.... ......+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998642 2578999876443 23456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC-----cEEEeeec
Q 005040 505 MPNGSLEKWLYSH------NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENM-----VAHVSDFG 573 (717)
Q Consensus 505 ~~~g~L~~~l~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~-----~~kl~Dfg 573 (717)
+++++|.+++... ...+++..+..++.|++.|++||| +.+++|+||||+||+++.++ .++++|||
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH----~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg 156 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE----QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFG 156 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH----hCCcccCCCChheEEEecCCCCCCcceEECCcc
Confidence 9999999999742 234788999999999999999999 67899999999999999887 89999999
Q ss_pred cccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCch
Q 005040 574 ISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRL 652 (717)
Q Consensus 574 l~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 652 (717)
++................++..|+|||++.++.++.++||||||+++|||++ |+.||..... ......+....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~--~~~~~~~~~~~---- 230 (269)
T cd05044 157 LARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN--QEVLQHVTAGG---- 230 (269)
T ss_pred cccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH--HHHHHHHhcCC----
Confidence 9976643332222223345778999999999999999999999999999998 9999864321 11111111000
Q ss_pred hhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 005040 653 TEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLR 703 (717)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~ 703 (717)
.......++..+.+++.+||..+|.+||+++++++.|+
T Consensus 231 -------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 231 -------------RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred -------------ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 00111234566889999999999999999999999886
No 231
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=3.4e-36 Score=309.97 Aligned_cols=262 Identities=25% Similarity=0.316 Sum_probs=193.7
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhhH--HHHHHHHHHHHHHHhc---CCCceeeEeeeeec-----CC
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLE--RAFRSFDSECEILRNV---RHRNLLKILGSCSN-----LD 496 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~hpniv~~~~~~~~-----~~ 496 (717)
+|++.+.||+|+||.||+|..+ +++.||+|.+..... .....+.+|+++++.+ +||||+++++++.+ ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4788899999999999999876 789999998865321 1223455677777665 69999999998754 34
Q ss_pred eeEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccc
Q 005040 497 FKALVLEFMPNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGIS 575 (717)
Q Consensus 497 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 575 (717)
..++||||+. ++|.+++... ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH----~~~ivH~dikp~Nili~~~~~~kl~dfg~~ 155 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLH----ANCIVHRDLKPENILVTSGGQVKLADFGLA 155 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEECCCCCEEECccCcc
Confidence 5799999997 5899988754 334899999999999999999999 678999999999999999999999999999
Q ss_pred cccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhh-CCC--ch
Q 005040 576 KLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKES-LPH--RL 652 (717)
Q Consensus 576 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~--~~ 652 (717)
........ .....+|..|+|||++.+..++.++||||+||++|||++|++||...... ..+.+..... .+. .+
T Consensus 156 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~-~~~~~~~~~~~~~~~~~~ 231 (288)
T cd07863 156 RIYSCQMA---LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDLIGLPPEDDW 231 (288)
T ss_pred ccccCccc---CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH-HHHHHHHHHhCCCChhhC
Confidence 87643221 12345789999999998889999999999999999999999998653221 1122211111 000 00
Q ss_pred hh-------hccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 653 TE-------VVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 653 ~~-------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.. ...+........ ...+++.++.+++.+|++.||++|||+.|++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 232 PRDVTLPRGAFSPRGPRPVQS--VVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred cccccccccccCCCCCCchHH--hCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00 000000000000 01134566889999999999999999999875
No 232
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=4.6e-36 Score=306.60 Aligned_cols=248 Identities=26% Similarity=0.326 Sum_probs=202.7
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
++|+..+.||.|+||.||+|... +++.||+|++.... ......+.+|+++++.++||||+++++++.+....++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 36888899999999999999975 78899999987543 33446788899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
+++++|.+++... .+++..+..++.|++.|+.||| +.+++||||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh----~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-- 152 (274)
T cd06609 81 CGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLH----EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM-- 152 (274)
T ss_pred eCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEEECCCCCEEEcccccceeecccc--
Confidence 9999999999875 5899999999999999999999 6789999999999999999999999999998775432
Q ss_pred eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhh
Q 005040 585 VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREE 664 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (717)
.......+++.|+|||+..+..++.++||||||+++|||++|+.||....... ....+....+ +.+.
T Consensus 153 ~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~--~~~~~~~~~~--------~~~~--- 219 (274)
T cd06609 153 SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR--VLFLIPKNNP--------PSLE--- 219 (274)
T ss_pred cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH--HHHHhhhcCC--------CCCc---
Confidence 11233467889999999988889999999999999999999999996532111 1100110000 0000
Q ss_pred hhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 665 QAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 665 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
. ..++.++.+++.+||..+|++|||++++++
T Consensus 220 ----~-~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 220 ----G-NKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred ----c-cccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 0 014456889999999999999999999976
No 233
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.4e-35 Score=302.23 Aligned_cols=248 Identities=31% Similarity=0.514 Sum_probs=194.8
Q ss_pred ccccccccEEEEEEEec-CCC--eEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCCeeEEEEEccCC
Q 005040 433 NLLGTGGFGSVYKGTLS-DGT--NVAIKIFNLQL-ERAFRSFDSECEILRNV-RHRNLLKILGSCSNLDFKALVLEFMPN 507 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~ 507 (717)
+.||+|+||.||+|..+ ++. .+|+|.++... ....+.+.+|+++++++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 36899999999999975 444 46888876432 34456788999999999 799999999999999999999999999
Q ss_pred CCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeee
Q 005040 508 GSLEKWLYSHN---------------YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDF 572 (717)
Q Consensus 508 g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 572 (717)
|+|.+++.... ..+++.++..++.|++.|++||| +.+++||||||+||+++.++.+|++||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH----~~~i~H~dikp~nili~~~~~~kl~df 156 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS----QKQFIHRDLAARNILVGENYVAKIADF 156 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH----HCCEeecccccceEEEcCCCeEEECCC
Confidence 99999997532 24789999999999999999999 679999999999999999999999999
Q ss_pred ccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCc
Q 005040 573 GISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHR 651 (717)
Q Consensus 573 gl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 651 (717)
|++..... .........+..|+|||+.....++.++||||||+++|||++ |..||...... .......... .
T Consensus 157 gl~~~~~~---~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~--~~~~~~~~~~--~ 229 (270)
T cd05047 157 GLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEKLPQGY--R 229 (270)
T ss_pred CCccccch---hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH--HHHHHHhCCC--C
Confidence 99863221 111112234667999999988889999999999999999997 99998653211 1111110000 0
Q ss_pred hhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhH
Q 005040 652 LTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIK 706 (717)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~ 706 (717)
. .....++.++.+++.+|++.+|.+|||+.++++.|+++.
T Consensus 230 --------~-------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 230 --------L-------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred --------C-------CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 0 001123456889999999999999999999999998764
No 234
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=6.2e-36 Score=313.51 Aligned_cols=265 Identities=18% Similarity=0.230 Sum_probs=195.5
Q ss_pred cccccccc--ccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEcc
Q 005040 431 ECNLLGTG--GFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFM 505 (717)
Q Consensus 431 ~~~~lg~G--~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 505 (717)
+.++||+| +|++||++..+ +|+.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45689999 68899999875 78999999997543 334456778999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 506 PNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 506 ~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++++||+...........
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH----~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~ 157 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIH----HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR 157 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH----HCCEecCCCChhhEEEecCCcEEEcccchhhcccccccc
Confidence 999999999754 334899999999999999999999 678999999999999999999999999875443211110
Q ss_pred -----eeeeccccCccccCCCccCC--CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCch-----
Q 005040 585 -----VIQTMTMATIGYMAPEYGSE--GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRL----- 652 (717)
Q Consensus 585 -----~~~~~~~~t~~y~aPE~~~~--~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~----- 652 (717)
.......++..|+|||++.+ ..++.++|||||||++|||++|+.||.......... .......+...
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~ 236 (327)
T cd08227 158 LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL-EKLNGTVPCLLDTTTI 236 (327)
T ss_pred ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHH-HHhcCCccccccccch
Confidence 01122346778999998865 458999999999999999999999997533221111 11111111000
Q ss_pred --hh--------hccccchh----------h--hhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 653 --TE--------VVDANLVR----------E--EQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 653 --~~--------~~~~~~~~----------~--~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.+ ..+..... . ....+....++.++.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 237 PAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred hhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 00 00000000 0 0000111234567899999999999999999999986
No 235
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=7.1e-36 Score=315.38 Aligned_cols=266 Identities=21% Similarity=0.262 Sum_probs=197.3
Q ss_pred HHHhccCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecC----
Q 005040 423 RRATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNL---- 495 (717)
Q Consensus 423 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~---- 495 (717)
....++|+..+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++...
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 11 WEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc
Confidence 345678999999999999999999864 78899999986543 22335577899999999999999999987543
Q ss_pred --CeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeec
Q 005040 496 --DFKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFG 573 (717)
Q Consensus 496 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 573 (717)
...++++|++ +++|.+++... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||
T Consensus 91 ~~~~~~~~~~~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH----~~~ivHrdikp~Nil~~~~~~~kl~Dfg 163 (343)
T cd07878 91 NFNEVYLVTNLM-GADLNNIVKCQ--KLSDEHVQFLIYQLLRGLKYIH----SAGIIHRDLKPSNVAVNEDCELRILDFG 163 (343)
T ss_pred ccCcEEEEeecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH----HCCeecccCChhhEEECCCCCEEEcCCc
Confidence 3568999988 77999888653 3899999999999999999999 6899999999999999999999999999
Q ss_pred cccccCCCCCceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCc-
Q 005040 574 ISKLLGEGEDSVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHR- 651 (717)
Q Consensus 574 l~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~- 651 (717)
++...... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ..+..+........
T Consensus 164 ~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~ 237 (343)
T cd07878 164 LARQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI-DQLKRIMEVVGTPSP 237 (343)
T ss_pred cceecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHhCCCCH
Confidence 99865432 123468999999998776 56899999999999999999999999653211 11111111110000
Q ss_pred -hhhhcccc----chhhhhhhhh------hHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 652 -LTEVVDAN----LVREEQAFSD------KMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 652 -~~~~~~~~----~~~~~~~~~~------~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
....+... .....+..+. .......+.+++.+|+..||++|||++|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 238 EVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000 0000000000 01123457899999999999999999999864
No 236
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2.3e-36 Score=305.80 Aligned_cols=240 Identities=22% Similarity=0.341 Sum_probs=190.0
Q ss_pred ccccccccEEEEEEEec-C-------CCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 433 NLLGTGGFGSVYKGTLS-D-------GTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~-~-------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
+.||+|+||.||+|..+ . ...||+|.+........+.+.+|+.+++.+.||||+++++++...+..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 36999999999999864 2 234888887665555567788899999999999999999999998899999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCc--------EEEeeecccc
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMV--------AHVSDFGISK 576 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~--------~kl~Dfgl~~ 576 (717)
+++|+|.++++.....+++..+..++.|++.||+||| +.+|+||||||+||+++.++. ++++|||.+.
T Consensus 81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLE----DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 9999999999876666899999999999999999999 689999999999999987765 6999999887
Q ss_pred ccCCCCCceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCC-CCCCccccCcchHHHHHHhhCCCchhh
Q 005040 577 LLGEGEDSVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEK-KPTDEMFTGEMSLRRWVKESLPHRLTE 654 (717)
Q Consensus 577 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (717)
..... ....++..|+|||++.+ ..++.++||||||+++|||++|. .|+...... ........
T Consensus 157 ~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~--~~~~~~~~-------- 220 (258)
T cd05078 157 TVLPK------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ--KKLQFYED-------- 220 (258)
T ss_pred ccCCc------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH--HHHHHHHc--------
Confidence 55321 22357888999998876 45799999999999999999995 555432111 00000000
Q ss_pred hccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 005040 655 VVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLR 703 (717)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~ 703 (717)
. ...+ .....++.+++.+||+.+|++|||++++++.|+
T Consensus 221 ----~-----~~~~--~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 221 ----R-----HQLP--APKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ----c-----ccCC--CCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0 0000 112345789999999999999999999998763
No 237
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-38 Score=321.44 Aligned_cols=326 Identities=21% Similarity=0.247 Sum_probs=240.2
Q ss_pred ccCCCCCcEEECCCCcceecCCcCCCCCCCCCEEEcccccccCccCCcccccccccccCccCCcEEeccCCCCcccCCcc
Q 005040 8 ITNATKLIGLDLGLNSFSGHIPNTFGNLRHLSVLSLMMNNLTTESSSADQWSFLSSLTNCRNLANLALASNPLGGILPPL 87 (717)
Q Consensus 8 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~ 87 (717)
|.++.+|+.++|.+|.++ .+|...+...+|+.|+|.+|.|+.+..+ .+..++.|+.||||.|.|+.+.-+.
T Consensus 98 f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se--------~L~~l~alrslDLSrN~is~i~~~s 168 (873)
T KOG4194|consen 98 FYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSE--------ELSALPALRSLDLSRNLISEIPKPS 168 (873)
T ss_pred HhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHH--------HHHhHhhhhhhhhhhchhhcccCCC
Confidence 344555555555555554 3444333333455555555555554433 2667777788888888887666566
Q ss_pred hhccccccceeeecCCcceecCCccccCCCCCcEEEccCCCCcccCCccccccCCCCEEeccCCcccccCCccccCCCCC
Q 005040 88 IGNFSASLQNIYAFECKLGGSIPKEIGNLRGLIVLSLGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPHDLCHLERL 167 (717)
Q Consensus 88 ~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L 167 (717)
|.+- .++++|+|++|+|+...-..|.++.+|.+|.|++|+|+...+..|.+|++|+.|+|..|+|.-.....|.++++|
T Consensus 169 fp~~-~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl 247 (873)
T KOG4194|consen 169 FPAK-VNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSL 247 (873)
T ss_pred CCCC-CCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhh
Confidence 6553 468888888888887777888888888888888888887777778888888888888888885556678888888
Q ss_pred CEEeccCCcCcccCCccccCCCCCCeEEecCccccCCCChhhhcccCCCeEEccCCcCcccCCccccCCCCCCeEEccCC
Q 005040 168 NILNLSGNKLSGAIPQCLASLTSLRSLYLQSNKLSSSLPSSLWSLEYILRINLSSNSLKGTLPSNIQKLNVLIDLDLSRN 247 (717)
Q Consensus 168 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 247 (717)
+.|.|..|.|.....+.|-.+.++++|+|..|++...-..++.+++.|+.|+||+|.|..+-++.+...++|++|+|++|
T Consensus 248 ~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N 327 (873)
T KOG4194|consen 248 QNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSN 327 (873)
T ss_pred hhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEecccc
Confidence 88888888888777778888888888888888888777777888888888888888888777888888888888888888
Q ss_pred CCCCCCcccccCCcccccccccCccccCCCCccccccCccceEeccCCCCCCCCcc---cccccccccEEEccCCccccc
Q 005040 248 QLSSDIPSTIGTLKNLETLSLAGNQFQGPIPESVGNLISLESLDFSNNNLSGKIPK---SLEALSHLKQFNVSHNRLEGE 324 (717)
Q Consensus 248 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~~~~~~---~~~~l~~L~~L~l~~N~l~~~ 324 (717)
+|+...+..|..+..|++|+|++|+++..-...|..+.+|+.|||++|.++..+.+ .|.+|++|+.|+|.||++...
T Consensus 328 ~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I 407 (873)
T KOG4194|consen 328 RITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSI 407 (873)
T ss_pred ccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeec
Confidence 88887788888888888888888888877677788888888888888888765543 577788888888888888754
Q ss_pred ccc-cccccccccccccCCc
Q 005040 325 IPV-KGSFKDFSAQSYFGNY 343 (717)
Q Consensus 325 ~p~-~~~~~~~~~~~~~~n~ 343 (717)
... ...++.++.+.+-+|+
T Consensus 408 ~krAfsgl~~LE~LdL~~Na 427 (873)
T KOG4194|consen 408 PKRAFSGLEALEHLDLGDNA 427 (873)
T ss_pred chhhhccCcccceecCCCCc
Confidence 332 2345555555555554
No 238
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.7e-36 Score=316.99 Aligned_cols=262 Identities=20% Similarity=0.209 Sum_probs=195.8
Q ss_pred HhccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEE
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLE 503 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 503 (717)
...+|++.+.||+|+||.||+|... +++.||+|+.... ....|+.++++++||||+++++++.+....++|||
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 3468999999999999999999975 6788999975432 23458999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 504 FMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 504 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
++. ++|.+++......+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 138 ~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~- 211 (357)
T PHA03209 138 HYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLH----AQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP- 211 (357)
T ss_pred ccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEECCCCCEEEecCccccccccCc-
Confidence 995 6999999877677999999999999999999999 6789999999999999999999999999987532211
Q ss_pred ceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCc-c--------hHHHHHHhh--CCCch
Q 005040 584 SVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGE-M--------SLRRWVKES--LPHRL 652 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~-~--------~~~~~~~~~--~~~~~ 652 (717)
......||..|+|||++.+..++.++|||||||++|||+++..|+-...+.. . .+.+.+... .+...
T Consensus 212 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 289 (357)
T PHA03209 212 --AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEF 289 (357)
T ss_pred --ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhc
Confidence 1223468999999999999999999999999999999999666542221111 0 111111100 00000
Q ss_pred h---------hhcccc-chh-hh--hhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 653 T---------EVVDAN-LVR-EE--QAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 653 ~---------~~~~~~-~~~-~~--~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
. ..++.. ... .. ........++.++.++|.+||+.||++|||+.||++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~ 350 (357)
T PHA03209 290 PRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILN 350 (357)
T ss_pred CCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhc
Confidence 0 000000 000 00 000111133455678999999999999999999986
No 239
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=7.2e-36 Score=307.99 Aligned_cols=269 Identities=21% Similarity=0.289 Sum_probs=199.3
Q ss_pred HhccCCccccccccccEEEEEEEec-CCCeEEEEEechhhH-HHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLE-RAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
++++|...+.||+|+||.||+|... +++.||+|++..... .....+.+|+++++.++|+||+++.+++.+.+..++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 3578999999999999999999864 789999999865432 22235678999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
||+. +++.+++......+++..+..++.|++.||.||| +.+|+|+||||+||+++.++.++|+|||+++......
T Consensus 83 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH----~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 157 (291)
T cd07870 83 EYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIH----GQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPS 157 (291)
T ss_pred eccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCChHHEEEcCCCcEEEeccccccccCCCC
Confidence 9995 7888887765555788889999999999999999 6789999999999999999999999999987643222
Q ss_pred CceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHH-hhCC-----------
Q 005040 583 DSVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVK-ESLP----------- 649 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~-~~~~----------- 649 (717)
.. .....+++.|+|||+..+ ..++.++||||||+++|||++|+.||....+....+.+... ...+
T Consensus 158 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (291)
T cd07870 158 QT--YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKL 235 (291)
T ss_pred CC--CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhc
Confidence 11 123356889999998765 45788999999999999999999999754322111111110 0001
Q ss_pred -CchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 650 -HRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 650 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
....+...................+.++.+++.+|+..||++|||++|++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 236 PNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred ccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 000000000000000000111112456789999999999999999999874
No 240
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=9e-36 Score=301.24 Aligned_cols=249 Identities=24% Similarity=0.310 Sum_probs=203.2
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
+|+..+.||.|+||.||.++.. +++.+++|.+.... ....+.+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 4788899999999999999854 78899999876442 34456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 505 MPNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 505 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
+++++|.+++... ...+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh----~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~ 156 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIH----KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS 156 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH----hCCccccCCChHhEEEeCCCCEEECcCcceEEcccccc
Confidence 9999999999865 455899999999999999999999 67899999999999999999999999999987643321
Q ss_pred ceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhh
Q 005040 584 SVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVRE 663 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (717)
......+++.|+|||+..+..++.++||||||+++|||++|+.||..... ........... ..
T Consensus 157 --~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-----~~~~~~~~~~~--------~~-- 219 (256)
T cd08221 157 --MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP-----LNLVVKIVQGN--------YT-- 219 (256)
T ss_pred --cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHcCC--------CC--
Confidence 12334688999999998888899999999999999999999999865221 11111111100 00
Q ss_pred hhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 664 EQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 664 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
+....++.++.+++.+||..+|++||+++++++.
T Consensus 220 ----~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 220 ----PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred ----CCccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 0012345668899999999999999999999875
No 241
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=7.7e-36 Score=304.05 Aligned_cols=252 Identities=24% Similarity=0.351 Sum_probs=188.5
Q ss_pred ccccccccEEEEEEEecC---CCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCCC
Q 005040 433 NLLGTGGFGSVYKGTLSD---GTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPNG 508 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 508 (717)
+.||+|+||.||+|...+ ...+|+|.+.... ......+.+|+++++.++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 368999999999997543 4568888775443 333456888999999999999999999999999999999999999
Q ss_pred CHHHHHhhCC----CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 509 SLEKWLYSHN----YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 509 ~L~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
+|.+++.... ...++.....++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~ 156 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH----QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYY 156 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHH----hcCEecccccHhheEecCCCcEEEeccccccccccchhe
Confidence 9999998643 22467788899999999999999 678999999999999999999999999998754332222
Q ss_pred eeeeccccCccccCCCccC-------CCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhc
Q 005040 585 VIQTMTMATIGYMAPEYGS-------EGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVV 656 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~-------~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (717)
.......++..|+|||+.. ...++.++|||||||++|||++ |..||......+ .+....... . ....
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~~~~-~---~~~~ 231 (269)
T cd05042 157 ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-VLKQVVREQ-D---IKLP 231 (269)
T ss_pred eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHHHHhhcc-C---ccCC
Confidence 2223334577899999753 3457889999999999999999 778886532211 111111110 0 0000
Q ss_pred cccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 005040 657 DANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLR 703 (717)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~ 703 (717)
.+.. ...++..+.+++..|+ .||++|||++||++.|.
T Consensus 232 ~~~~---------~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 232 KPQL---------DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCcc---------cccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 1110 1133455678888998 59999999999999873
No 242
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-37 Score=311.68 Aligned_cols=246 Identities=27% Similarity=0.344 Sum_probs=202.5
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
..|...+-||+|.||.||-|... +.+.||||.+.... .+.+.++.+|+++|++++|||+|.+-|+|-......+||
T Consensus 26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVM 105 (948)
T KOG0577|consen 26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVM 105 (948)
T ss_pred HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHH
Confidence 34566678999999999999864 78889999986443 455688999999999999999999999999888899999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
|||- |+-.|.+.-..+++-+..+..|+.+.+.||+||| +.+.+|||||+.|||+++.|.|||+|||.+....+.
T Consensus 106 EYCl-GSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLH----S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA- 179 (948)
T KOG0577|consen 106 EYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH----SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA- 179 (948)
T ss_pred HHHh-ccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH----HhhHHhhhccccceEecCCCeeeeccccchhhcCch-
Confidence 9995 5888888877777899999999999999999999 789999999999999999999999999999876543
Q ss_pred CceeeeccccCccccCCCcc---CCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhcccc
Q 005040 583 DSVIQTMTMATIGYMAPEYG---SEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDAN 659 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~---~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (717)
..++|||.|||||++ ..+.|+-|+||||+|++..|+...++|+-.+.. +.-..-+.+..+..+.
T Consensus 180 -----nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA--MSALYHIAQNesPtLq------ 246 (948)
T KOG0577|consen 180 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--MSALYHIAQNESPTLQ------ 246 (948)
T ss_pred -----hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH--HHHHHHHHhcCCCCCC------
Confidence 456799999999974 458899999999999999999999999754321 1111112222111111
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 660 LVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 660 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
..+.+..+.+++..|+++-|.+|||..+++..
T Consensus 247 ----------s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 247 ----------SNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred ----------CchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 12345668999999999999999999998764
No 243
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=8.6e-36 Score=327.04 Aligned_cols=266 Identities=22% Similarity=0.251 Sum_probs=193.0
Q ss_pred HHHHhccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCC------CceeeEeeeeec
Q 005040 422 IRRATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRH------RNLLKILGSCSN 494 (717)
Q Consensus 422 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h------pniv~~~~~~~~ 494 (717)
+....++|++.+.||+|+||+||+|... .++.||||+++... ...+.+..|+++++.++| ++++.+++++..
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 3445688999999999999999999865 68889999986432 223445667777777754 458899998865
Q ss_pred C-CeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC--------
Q 005040 495 L-DFKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENM-------- 565 (717)
Q Consensus 495 ~-~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~-------- 565 (717)
. .+.++|||++ +++|.+++...+ .+++..+..++.||+.||.|||. ..+|+||||||+|||++.++
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~yLH~---~~gIiHrDlKP~NILl~~~~~~~~~~~~ 277 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIMKHG-PFSHRHLAQIIFQTGVALDYFHT---ELHLMHTDLKPENILMETSDTVVDPVTN 277 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEEecCCcccccccc
Confidence 4 5788999988 679999887654 48999999999999999999993 25899999999999998765
Q ss_pred --------cEEEeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCc
Q 005040 566 --------VAHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGE 637 (717)
Q Consensus 566 --------~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~ 637 (717)
.+||+|||.+...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||+.....
T Consensus 278 ~~~~~~~~~vkl~DfG~~~~~~~~-----~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~- 351 (467)
T PTZ00284 278 RALPPDPCRVRICDLGGCCDERHS-----RTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNL- 351 (467)
T ss_pred cccCCCCceEEECCCCccccCccc-----cccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-
Confidence 4999999987643221 23457899999999999999999999999999999999999999763221
Q ss_pred chHHHHHHhh---CCCch---------hhhccc------cchhh----hhh--hhhhHHHHHHHHHHHhhccCCCCCCCC
Q 005040 638 MSLRRWVKES---LPHRL---------TEVVDA------NLVRE----EQA--FSDKMDCLFSIMDLALDCCMDTPHKRI 693 (717)
Q Consensus 638 ~~~~~~~~~~---~~~~~---------~~~~~~------~~~~~----~~~--~~~~~~~~~~l~~li~~cl~~~P~~Rp 693 (717)
.....+... .+..+ .++++. ..... ... ..........+.+||.+||+.||++||
T Consensus 352 -~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ 430 (467)
T PTZ00284 352 -EHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRL 430 (467)
T ss_pred -HHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCC
Confidence 111111110 01000 000000 00000 000 000001134578999999999999999
Q ss_pred CHHHHHH
Q 005040 694 HMTDAAA 700 (717)
Q Consensus 694 t~~ev~~ 700 (717)
|++|+++
T Consensus 431 ta~e~L~ 437 (467)
T PTZ00284 431 NARQMTT 437 (467)
T ss_pred CHHHHhc
Confidence 9999987
No 244
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=5.6e-36 Score=317.61 Aligned_cols=265 Identities=22% Similarity=0.233 Sum_probs=197.4
Q ss_pred HhccCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecC------
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNL------ 495 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~------ 495 (717)
..++|+..+.||+|+||.||+|... .++.||+|++.... ......+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4578999999999999999999865 68899999986532 23345677899999999999999999987543
Q ss_pred CeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccc
Q 005040 496 DFKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGIS 575 (717)
Q Consensus 496 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 575 (717)
...++||||+++ ++.+++.. .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH----~~givHrDikp~Nill~~~~~~kl~Dfg~~ 166 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLA 166 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCChHHEEECCCCCEEEeeCccc
Confidence 357999999965 77777754 3788899999999999999999 689999999999999999999999999999
Q ss_pred cccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCC-----
Q 005040 576 KLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPH----- 650 (717)
Q Consensus 576 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~----- 650 (717)
+...... ......+|+.|+|||++.+..++.++|||||||++|||++|+.||.+....+ .....+......
T Consensus 167 ~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~ 242 (355)
T cd07874 167 RTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQLGTPCPEFM 242 (355)
T ss_pred ccCCCcc---ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHH
Confidence 8654321 1233468999999999999899999999999999999999999997532111 111111110000
Q ss_pred -----chhhhcccc-------chhhhh------hhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 651 -----RLTEVVDAN-------LVREEQ------AFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 651 -----~~~~~~~~~-------~~~~~~------~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
.....++.. +..... ..........++.+++.+|++.||++|||+.|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 243 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 000000000 000000 000011124567899999999999999999999974
No 245
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=7.1e-36 Score=303.69 Aligned_cols=253 Identities=25% Similarity=0.302 Sum_probs=204.6
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
++|+..+.||+|+||.||+|..+ +++.||+|.+.... ....+.+.+|++++++++||||+++++++......++|+||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 36788899999999999999976 78999999887653 34456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-CCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSS-APIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
+++++|.+++......+++..+..++.|++.|++||| + .+++|+||||+||+++.++.++|+|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH----~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 156 (265)
T cd06605 81 MDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLH----EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA 156 (265)
T ss_pred cCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHc----CCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh
Confidence 9999999999876566899999999999999999999 5 7999999999999999999999999999876532211
Q ss_pred ceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhh
Q 005040 584 SVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVRE 663 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (717)
....++..|+|||+..+..++.++||||||+++|+|++|+.||.....................
T Consensus 157 ----~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~------------ 220 (265)
T cd06605 157 ----KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEP------------ 220 (265)
T ss_pred ----hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCC------------
Confidence 1156788999999998889999999999999999999999998754222121222211111100
Q ss_pred hhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 664 EQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 664 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.+..+. ..++.++.++|.+||..+|++|||+.+++.
T Consensus 221 ~~~~~~-~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 221 PPRLPS-GKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred CCCCCh-hhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 000001 114566889999999999999999999875
No 246
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=3.5e-36 Score=309.28 Aligned_cols=266 Identities=22% Similarity=0.283 Sum_probs=198.5
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
+|+..+.||+|+||.||+|... +|+.||+|++.... ......+.+|++++++++||||+++++++.+....++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4778899999999999999975 78999999986542 12234577899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
++ ++|.+++......+++..+..++.|+++||.||| +.+++||||||+||+++.++.++|+|||++.........
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH----~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~ 155 (284)
T cd07839 81 CD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCH----SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRC 155 (284)
T ss_pred CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCC
Confidence 96 5899888766566899999999999999999999 678999999999999999999999999999865432211
Q ss_pred eeeeccccCccccCCCccCCC-CcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCc------hhhhcc
Q 005040 585 VIQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHR------LTEVVD 657 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 657 (717)
.....++..|+|||++.+. .++.++|||||||++|||+||+.|+.........+........... .....+
T Consensus 156 --~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07839 156 --YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPD 233 (284)
T ss_pred --cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccc
Confidence 1234568899999987664 4789999999999999999999986432222211111111100000 000000
Q ss_pred cc----chhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 658 AN----LVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 658 ~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.. ......-.......+.++.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 234 YKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred ccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 00 00000000011134567889999999999999999999875
No 247
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.7e-36 Score=339.39 Aligned_cols=255 Identities=20% Similarity=0.284 Sum_probs=197.7
Q ss_pred HHhccCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeec--CCee
Q 005040 424 RATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSN--LDFK 498 (717)
Q Consensus 424 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~--~~~~ 498 (717)
...++|++.+.||+|+||+||+|... ++..||+|++.... ......+..|+.++++++||||++++++|.+ ....
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 34578999999999999999999975 67789999886432 3345678899999999999999999998844 4568
Q ss_pred EEEEEccCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHhhcC---CCCCeEecCCCCCCeeeCC---------
Q 005040 499 ALVLEFMPNGSLEKWLYSH---NYFLDILQRLNIMIDVGSALEYLHHCH---SSAPIIHCDLKPTNILLDE--------- 563 (717)
Q Consensus 499 ~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~---~~~~ivH~dlk~~Nill~~--------- 563 (717)
|+||||+++|+|.+++... ...+++..++.|+.||+.||.|||... ...+|+||||||+|||++.
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 9999999999999999753 245899999999999999999999532 0146999999999999964
Q ss_pred --------CCcEEEeeeccccccCCCCCceeeeccccCccccCCCccCC--CCcCcccchhhHHHHHHHHHhCCCCCCcc
Q 005040 564 --------NMVAHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSE--GIVSTKCDVYSYGVLLMETFTEKKPTDEM 633 (717)
Q Consensus 564 --------~~~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~Dvws~G~il~el~tg~~p~~~~ 633 (717)
.+.+||+|||++..+..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s~---~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~ 246 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFGLSKNIGIESM---AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKA 246 (1021)
T ss_pred ccccccCCCCceEEccCCcccccccccc---ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcC
Confidence 23589999999987643221 234468999999998753 45889999999999999999999999642
Q ss_pred ccCcchHHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 634 FTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.. ....+...... +.+ ....++.++.+||..||..+|.+||++.|++.
T Consensus 247 ~~----~~qli~~lk~~-------p~l--------pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 247 NN----FSQLISELKRG-------PDL--------PIKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred Cc----HHHHHHHHhcC-------CCC--------CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 21 11111111000 000 00123456889999999999999999999984
No 248
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.3e-35 Score=305.28 Aligned_cols=252 Identities=25% Similarity=0.350 Sum_probs=199.9
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
++|++.+.||+|+||.||+|..+ +++.||+|.+.... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 36888999999999999999976 78999999886542 33446788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 505 MPNGSLEKWLYSH--NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 505 ~~~g~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
+++++|.+++... ...+++..+..++.|++.|+.|||+ +.+|+||||||+||+++.++.++|+|||++..+....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE---EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL 157 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh---cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc
Confidence 9999999998764 2358999999999999999999994 3589999999999999999999999999987653221
Q ss_pred CceeeeccccCccccCCCccCCC------CcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhc
Q 005040 583 DSVIQTMTMATIGYMAPEYGSEG------IVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVV 656 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~~~------~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (717)
.....++..|+|||.+.+. .++.++|+|||||++|||++|+.||....... .... .. ...
T Consensus 158 ----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~-~~--------~~~ 223 (286)
T cd06622 158 ----AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN-IFAQ-LS--------AIV 223 (286)
T ss_pred ----cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh-HHHH-HH--------HHh
Confidence 1233578899999987544 35889999999999999999999996532111 0000 00 000
Q ss_pred cccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 657 DANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
+... . ..+.+++.++.+++.+|+..+|++||++.+++..
T Consensus 224 ~~~~----~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 224 DGDP----P--TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred hcCC----C--CCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 0000 0 0111345668899999999999999999999873
No 249
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.6e-35 Score=309.28 Aligned_cols=195 Identities=22% Similarity=0.278 Sum_probs=159.7
Q ss_pred cccccccccEEEEEEEec---CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeec--CCeeEEEEEccC
Q 005040 432 CNLLGTGGFGSVYKGTLS---DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSN--LDFKALVLEFMP 506 (717)
Q Consensus 432 ~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~--~~~~~lv~e~~~ 506 (717)
.++||+|+||+||+|... +++.||+|.+.... ....+.+|++++++++||||+++++++.. ....++||||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 468999999999999864 56789999886442 12456789999999999999999998854 456789999995
Q ss_pred CCCHHHHHhhC--------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeee----CCCCcEEEeeecc
Q 005040 507 NGSLEKWLYSH--------NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILL----DENMVAHVSDFGI 574 (717)
Q Consensus 507 ~g~L~~~l~~~--------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfgl 574 (717)
++|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+|||+ +..+.+||+|||+
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH----~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH----ANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH----hCCEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence 5898887632 234889999999999999999999 6889999999999999 4667999999999
Q ss_pred ccccCCCCCc-eeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCcc
Q 005040 575 SKLLGEGEDS-VIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEM 633 (717)
Q Consensus 575 ~~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~ 633 (717)
++........ .......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 9876433211 11234568999999998876 45899999999999999999999999653
No 250
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.6e-35 Score=303.07 Aligned_cols=248 Identities=24% Similarity=0.349 Sum_probs=202.8
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
..|+..+.||+|+||.||+|... +++.||+|++.... ......+.+|+++++++.||||+++++++.+....++||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 46778889999999999999875 68899999987543 34456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
+++|+|.+++... .+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.++++|||++........
T Consensus 84 ~~~~~L~~~i~~~--~l~~~~~~~~~~~l~~~l~~lh----~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~- 156 (277)
T cd06640 84 LGGGSALDLLRAG--PFDEFQIATMLKEILKGLDYLH----SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI- 156 (277)
T ss_pred CCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH----hCCccCcCCChhhEEEcCCCCEEEcccccceeccCCcc-
Confidence 9999999999764 3788999999999999999999 67899999999999999999999999999976543221
Q ss_pred eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhh
Q 005040 585 VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREE 664 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (717)
......++..|+|||++.+..++.++|+||||+++|||++|+.||....+... ...+....+ +
T Consensus 157 -~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--~~~~~~~~~--------~------ 219 (277)
T cd06640 157 -KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV--LFLIPKNNP--------P------ 219 (277)
T ss_pred -ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH--hhhhhcCCC--------C------
Confidence 12334578899999999888899999999999999999999999875432111 000000000 0
Q ss_pred hhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 665 QAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 665 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
.....++..+.+++.+||+.+|++||++.++++.
T Consensus 220 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 220 ---TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred ---CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 0112355678899999999999999999999765
No 251
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1.2e-35 Score=308.35 Aligned_cols=256 Identities=21% Similarity=0.247 Sum_probs=201.0
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
++|+..+.||+|+||.||++... +++.||+|.+.... ......+.+|+++++.++||||+++++.+...+..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36888999999999999999976 67899999987553 233456788999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
||+++++|.+++...+ .+++..+..++.|++.|++||| +.+++||||||+||+++.++.++++|||+++......
T Consensus 81 e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 81 EYVEGGDCATLLKNIG-ALPVDMARMYFAETVLALEYLH----NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred ecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCccccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence 9999999999998754 4889999999999999999999 6789999999999999999999999999886421110
Q ss_pred C-------------ceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCC
Q 005040 583 D-------------SVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLP 649 (717)
Q Consensus 583 ~-------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 649 (717)
. ........++..|+|||++.+..++.++|+||||+++|||++|+.||.+.... ++......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~-----~~~~~~~~ 230 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE-----ELFGQVIS 230 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHh
Confidence 0 00111235788899999988888999999999999999999999998653211 11111000
Q ss_pred CchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 005040 650 HRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRK 704 (717)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~ 704 (717)
.... .+ .....++.++.+++.+||+.+|++||++.++.+.|+.
T Consensus 231 ~~~~---~~---------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 231 DDIE---WP---------EGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred cccC---CC---------CccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 0000 00 0001245668899999999999999997766666654
No 252
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-37 Score=315.90 Aligned_cols=251 Identities=26% Similarity=0.328 Sum_probs=206.3
Q ss_pred ccCCccccccccccEEEEEEEecC-CCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEcc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLSD-GTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFM 505 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 505 (717)
+-|+++.-||.|+||.||+|..++ +-..|.|++.....+..++|.-|+++|+.+.||+||++++.|...+.+.+..|||
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC 111 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC 111 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence 345677889999999999999874 3445778888777888899999999999999999999999988888899999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCce
Q 005040 506 PNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSV 585 (717)
Q Consensus 506 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 585 (717)
.||.+...+-+-+..+.+.++.-+++|++.||.||| +..|+|||||+.|||++-+|.++|+|||.+..... ...
T Consensus 112 ~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LH----s~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~--t~q 185 (1187)
T KOG0579|consen 112 GGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLH----SQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS--TRQ 185 (1187)
T ss_pred CCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHh----hcchhhhhccccceEEEecCcEeeecccccccchh--HHh
Confidence 999999999888888999999999999999999999 78999999999999999999999999999864321 112
Q ss_pred eeeccccCccccCCCc-----cCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccc
Q 005040 586 IQTMTMATIGYMAPEY-----GSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANL 660 (717)
Q Consensus 586 ~~~~~~~t~~y~aPE~-----~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (717)
....+.|||+|||||+ .+..+|+.++||||||++|.||..+.+|-....+ ++..++. -
T Consensus 186 kRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp----MRVllKi-------------a 248 (1187)
T KOG0579|consen 186 KRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP----MRVLLKI-------------A 248 (1187)
T ss_pred hhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch----HHHHHHH-------------h
Confidence 2345689999999995 4567899999999999999999999999654221 1111111 1
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 661 VREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 661 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
+.+++....+...+..+.+++.+|+..+|..||++.++++
T Consensus 249 KSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 249 KSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred hcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 1122233334455667889999999999999999999875
No 253
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=8e-36 Score=305.04 Aligned_cols=254 Identities=24% Similarity=0.388 Sum_probs=202.3
Q ss_pred ccCCccccccccccEEEEEEEec------CCCeEEEEEechhhHH-HHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS------DGTNVAIKIFNLQLER-AFRSFDSECEILRNVRHRNLLKILGSCSNLDFKA 499 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~ 499 (717)
++|+..+.||+|+||.||+|+.+ +.+.||+|.+.....+ ..+.+.+|++++++++||||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 57888999999999999999864 3467999988654433 4567889999999999999999999999989999
Q ss_pred EEEEccCCCCHHHHHhhCC--------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEee
Q 005040 500 LVLEFMPNGSLEKWLYSHN--------YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSD 571 (717)
Q Consensus 500 lv~e~~~~g~L~~~l~~~~--------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~D 571 (717)
+||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++++|
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH----~~~i~H~dlkp~Nili~~~~~~~l~~ 160 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS----NARFVHRDLAARNCLVSSQREVKVSL 160 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh----hcCcccCcCccceEEEeCCCcEEEcc
Confidence 9999999999999998543 14899999999999999999999 67899999999999999999999999
Q ss_pred eccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCC
Q 005040 572 FGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPH 650 (717)
Q Consensus 572 fgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 650 (717)
||++........ .......++..|+|||.+.+..++.++||||||+++|||++ |..||...... ........ .
T Consensus 161 ~~~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~--~~~~~~~~---~ 234 (275)
T cd05046 161 LSLSKDVYNSEY-YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE--EVLNRLQA---G 234 (275)
T ss_pred cccccccCcccc-cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH--HHHHHHHc---C
Confidence 999875432221 11223345778999999888889999999999999999999 78888543211 11111110 0
Q ss_pred chhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 005040 651 RLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLR 703 (717)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~ 703 (717)
.... .....++..+.+++.+||+.+|++||++.|+++.|.
T Consensus 235 ~~~~-------------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 235 KLEL-------------PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CcCC-------------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 0000 001134456889999999999999999999999875
No 254
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=7.1e-36 Score=305.69 Aligned_cols=247 Identities=24% Similarity=0.350 Sum_probs=200.5
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
+.|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++.+....++||||
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence 35667788999999999999865 68889999987443 34456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
+++++|.+++... .+++..+..++.|+++|+.||| +.+++|+||+|+||+++.++.++++|||++........
T Consensus 84 ~~~~~L~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH----~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~- 156 (277)
T cd06642 84 LGGGSALDLLKPG--PLEETYIATILREILKGLDYLH----SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI- 156 (277)
T ss_pred cCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHh----cCCeeccCCChheEEEeCCCCEEEccccccccccCcch-
Confidence 9999999998753 4789999999999999999999 67899999999999999999999999999876543221
Q ss_pred eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhh
Q 005040 585 VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREE 664 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (717)
......++..|+|||++.+..++.++||||||+++|||++|+.|+....... ...++....+ +.+
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~~~~~~~~--------~~~---- 221 (277)
T cd06642 157 -KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR--VLFLIPKNSP--------PTL---- 221 (277)
T ss_pred -hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh--HHhhhhcCCC--------CCC----
Confidence 1123357889999999998889999999999999999999999986532211 1111111000 000
Q ss_pred hhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 665 QAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 665 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
...++.++.+++.+|++.+|++||++.++++
T Consensus 222 -----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 222 -----EGQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred -----CcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 1123456889999999999999999999997
No 255
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=6.9e-36 Score=317.95 Aligned_cols=265 Identities=20% Similarity=0.210 Sum_probs=197.4
Q ss_pred HhccCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecC------
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNL------ 495 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~------ 495 (717)
..++|+..+.||+|+||.||+|... .++.||||++.... ......+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 3578999999999999999999865 68899999986532 23345677899999999999999999987543
Q ss_pred CeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccc
Q 005040 496 DFKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGIS 575 (717)
Q Consensus 496 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 575 (717)
...|+||||++ ++|.+++.. .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 173 (364)
T cd07875 102 QDVYIVMELMD-ANLCQVIQM---ELDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173 (364)
T ss_pred CeEEEEEeCCC-CCHHHHHHh---cCCHHHHHHHHHHHHHHHHHHh----hCCeecCCCCHHHEEECCCCcEEEEeCCCc
Confidence 35799999996 478877754 2788899999999999999999 689999999999999999999999999999
Q ss_pred cccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCC--chh
Q 005040 576 KLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPH--RLT 653 (717)
Q Consensus 576 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~ 653 (717)
+...... ......+|..|+|||++.+..++.++|||||||++|||++|+.||...... ............. ...
T Consensus 174 ~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~ 249 (364)
T cd07875 174 RTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVIEQLGTPCPEFM 249 (364)
T ss_pred cccCCCC---cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHH
Confidence 8654321 123346899999999999999999999999999999999999999753221 1111111110000 000
Q ss_pred hhccccchh---h------------hhh------hhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 654 EVVDANLVR---E------------EQA------FSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 654 ~~~~~~~~~---~------------~~~------~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
..+.+.... . .+. .........++.+++.+|++.||.+|||+.|+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000000 0 000 00001123568899999999999999999999874
No 256
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.5e-35 Score=299.69 Aligned_cols=248 Identities=21% Similarity=0.323 Sum_probs=201.6
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
+|+..+.||+|+||.||++... +++.||+|.+.... ......+.+|+.++++++||||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 5788999999999999999865 78999999987542 33446788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 505 MPNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 505 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
+.+++|.+++... ...+++.++..++.|++.|+.||| +.+++|+||+|+||+++.++.++++|||++........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh----~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 156 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVH----DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE 156 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH----hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh
Confidence 9999999999764 335789999999999999999999 67899999999999999999999999999976643221
Q ss_pred ceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhh
Q 005040 584 SVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVRE 663 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (717)
. .....+++.|+|||+..+..++.++|+||||+++|+|++|+.||..... ...+........
T Consensus 157 ~--~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-----~~~~~~~~~~~~----------- 218 (256)
T cd08218 157 L--ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM-----KNLVLKIIRGSY----------- 218 (256)
T ss_pred h--hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH-----HHHHHHHhcCCC-----------
Confidence 1 1233578899999999888899999999999999999999999864211 111111111000
Q ss_pred hhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 664 EQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 664 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
. .....++.++.+++.+||+.+|++||++.||++
T Consensus 219 -~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 219 -P--PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred -C--CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 0 011234566889999999999999999999986
No 257
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.1e-35 Score=305.78 Aligned_cols=258 Identities=24% Similarity=0.306 Sum_probs=199.6
Q ss_pred HHHHHHhccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhc-CCCceeeEeeeee----
Q 005040 420 LDIRRATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNV-RHRNLLKILGSCS---- 493 (717)
Q Consensus 420 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~---- 493 (717)
..+..+.++|++.+.||+|+||.||+|... +++.+|+|++..... ....+.+|+.+++.+ +||||+++++++.
T Consensus 11 ~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 89 (286)
T cd06638 11 DSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD-IDEEIEAEYNILKALSDHPNVVKFYGMYYKKDV 89 (286)
T ss_pred ecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc-hHHHHHHHHHHHHHHhcCCCeeeeeeeeeeccc
Confidence 344556789999999999999999999875 688999998764322 235677899999999 6999999999873
Q ss_pred -cCCeeEEEEEccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEE
Q 005040 494 -NLDFKALVLEFMPNGSLEKWLYS---HNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHV 569 (717)
Q Consensus 494 -~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl 569 (717)
..+..++||||+++++|.+++.. ....+++..+..++.|+++|+.||| +.+++||||||+||+++.++.++|
T Consensus 90 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~nili~~~~~~kl 165 (286)
T cd06638 90 KNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH----VNKTIHRDVKGNNILLTTEGGVKL 165 (286)
T ss_pred CCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHH----hCCccccCCCHHhEEECCCCCEEE
Confidence 44578999999999999998863 2345889999999999999999999 678999999999999999999999
Q ss_pred eeeccccccCCCCCceeeeccccCccccCCCccC-----CCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHH
Q 005040 570 SDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGS-----EGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWV 644 (717)
Q Consensus 570 ~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~-----~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~ 644 (717)
+|||++........ ......|++.|+|||++. +..++.++||||+||++|||++|+.||...... ....
T Consensus 166 ~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~----~~~~ 239 (286)
T cd06638 166 VDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM----RALF 239 (286)
T ss_pred ccCCceeecccCCC--ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh----HHHh
Confidence 99999876643221 122346899999999864 345789999999999999999999998653211 1110
Q ss_pred HhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 645 KESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
. ......... ..+..++.++.+++.+||+.||++|||+.|+++.
T Consensus 240 ~-~~~~~~~~~------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 240 K-IPRNPPPTL------------HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred h-ccccCCCcc------------cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 0 000000000 0011233568899999999999999999999875
No 258
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.5e-35 Score=298.13 Aligned_cols=248 Identities=25% Similarity=0.340 Sum_probs=199.3
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeec-CCeeEEEEE
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSN-LDFKALVLE 503 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~-~~~~~lv~e 503 (717)
+|++.+.||+|++|.||++..+ +++.||+|.+.... ....+.+.+|++++++++|||++++++.+.. ....++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4788999999999999999865 67889999986543 3345668889999999999999999998764 446789999
Q ss_pred ccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 504 FMPNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 504 ~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
|+++++|.+++... ...+++.++..++.|++.|++||| +.+++||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH----~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~ 156 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLH----EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC 156 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence 99999999999864 345899999999999999999999 6789999999999999999999999999998664322
Q ss_pred CceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchh
Q 005040 583 DSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVR 662 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (717)
. ......+++.|+|||+..+..++.++||||+|+++|||++|+.||..... .............
T Consensus 157 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~-----~~~~~~~~~~~~~--------- 220 (257)
T cd08223 157 D--MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM-----NSLVYRIIEGKLP--------- 220 (257)
T ss_pred C--ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-----HHHHHHHHhcCCC---------
Confidence 1 12334578899999999999999999999999999999999999865221 1111111000000
Q ss_pred hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 663 EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 663 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
......+..+.+++.+|++.+|++||++.++++
T Consensus 221 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 221 -----PMPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred -----CCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 001134456889999999999999999999875
No 259
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.5e-35 Score=301.71 Aligned_cols=256 Identities=27% Similarity=0.340 Sum_probs=205.1
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
++|++.+.||.|+||+||+|... ++..+|+|++.... ....+.+.+|+++++.++|||++++++.+...+..++|+|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 46889999999999999999865 78899999986443 33557788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 505 MPNGSLEKWLYSH--NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 505 ~~~g~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
+++++|.++++.. ...+++..+..++.|++.|+.||| +.+++||||+|+||++++++.++|+|||++..+....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh----~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~ 156 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH----SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGG 156 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCc
Confidence 9999999999864 245899999999999999999999 6889999999999999999999999999998765433
Q ss_pred Cce--eeeccccCccccCCCccCCC-CcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhcccc
Q 005040 583 DSV--IQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDAN 659 (717)
Q Consensus 583 ~~~--~~~~~~~t~~y~aPE~~~~~-~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (717)
... ......++..|+|||++... .++.++|+||||+++|||++|+.||...... .......... +..
T Consensus 157 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~-~~~~~~~~~~-~~~-------- 226 (267)
T cd06610 157 DRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM-KVLMLTLQND-PPS-------- 226 (267)
T ss_pred cccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh-hhHHHHhcCC-CCC--------
Confidence 221 22334588999999988776 7899999999999999999999999754221 1111111110 000
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 660 LVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 660 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
+.. ......++.++.+++.+|+..||++||+++++++
T Consensus 227 ~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 227 LET----GADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred cCC----ccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 000 0001234567889999999999999999999876
No 260
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.4e-35 Score=300.37 Aligned_cols=238 Identities=24% Similarity=0.416 Sum_probs=189.7
Q ss_pred ccccccccEEEEEEEecCCC-----------eEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEE
Q 005040 433 NLLGTGGFGSVYKGTLSDGT-----------NVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALV 501 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv 501 (717)
+.||+|+||.||+|...+.. .|++|++...... ...+.+|+.+++.++||||+++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 36899999999999976332 5788877655433 5778899999999999999999999887 778999
Q ss_pred EEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC-------cEEEeeecc
Q 005040 502 LEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENM-------VAHVSDFGI 574 (717)
Q Consensus 502 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~-------~~kl~Dfgl 574 (717)
|||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||+
T Consensus 79 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH----~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 79 EEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLE----DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred EEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh----hCCeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 9999999999999876656899999999999999999999 68899999999999999887 799999999
Q ss_pred ccccCCCCCceeeeccccCccccCCCccCCC--CcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCc
Q 005040 575 SKLLGEGEDSVIQTMTMATIGYMAPEYGSEG--IVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHR 651 (717)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 651 (717)
+..... .....++..|+|||++.+. .++.++||||||+++|||++ |..||...... ....+.... ..
T Consensus 155 a~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~--~~~~~~~~~--~~ 224 (259)
T cd05037 155 PITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS--EKERFYQDQ--HR 224 (259)
T ss_pred cccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch--hHHHHHhcC--CC
Confidence 986543 1223466789999998776 78999999999999999999 57777553211 111111100 00
Q ss_pred hhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 005040 652 LTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLR 703 (717)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~ 703 (717)
.. . .....+.+++.+||..+|.+|||+.++++.|+
T Consensus 225 --------~~-------~--~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 225 --------LP-------M--PDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred --------CC-------C--CCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 00 0 00145789999999999999999999998763
No 261
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1e-35 Score=302.85 Aligned_cols=249 Identities=27% Similarity=0.396 Sum_probs=198.8
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh---------HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCe
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---------ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDF 497 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~ 497 (717)
+|.+...||+|+||.||+|... +++.||+|.+.... .+..+.+.+|+.++++++||||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 4677889999999999999864 68899999885432 1233568889999999999999999999999999
Q ss_pred eEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccc
Q 005040 498 KALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKL 577 (717)
Q Consensus 498 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 577 (717)
.++||||+++++|.+++.... .+++..+..++.|++.|++||| +.+++||||+|+||++++++.++|+|||.++.
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~l~~~l~~lH----~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~ 155 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYG-AFEETLVRNFVRQILKGLNYLH----NRGIIHRDIKGANILVDNKGGIKISDFGISKK 155 (267)
T ss_pred cEEEEEecCCCCHHHHHHhcc-CccHHHHHHHHHHHHHHHHHHH----hcCcccccCCHHHEEEcCCCCEEecccCCCcc
Confidence 999999999999999998753 4788999999999999999999 67899999999999999999999999999887
Q ss_pred cCCCCCc----eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchh
Q 005040 578 LGEGEDS----VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLT 653 (717)
Q Consensus 578 ~~~~~~~----~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 653 (717)
....... .......++..|+|||.+.+..++.++||||+|+++|||++|+.||....... ... ....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~-~~~~------- 226 (267)
T cd06628 156 LEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ-AIF-KIGE------- 226 (267)
T ss_pred cccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH-HHH-HHhc-------
Confidence 6422111 11122357889999999998889999999999999999999999997531110 000 0000
Q ss_pred hhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 654 EVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
...+.+ +..++..+.+++.+||+.||.+||++.|+++
T Consensus 227 -~~~~~~---------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 227 -NASPEI---------PSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred -cCCCcC---------CcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 000000 1133466889999999999999999999876
No 262
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.3e-35 Score=305.87 Aligned_cols=250 Identities=24% Similarity=0.309 Sum_probs=203.1
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEcc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFM 505 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 505 (717)
.+|+..+.||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++|||++++++++...+..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 68889999999999999999864 78899999987554445567888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCce
Q 005040 506 PNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSV 585 (717)
Q Consensus 506 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 585 (717)
++++|.+++.+.. +++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++|+|||++........
T Consensus 99 ~~~~L~~~~~~~~--l~~~~~~~i~~~l~~al~~LH----~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~-- 170 (293)
T cd06647 99 AGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLH----SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-- 170 (293)
T ss_pred CCCcHHHHHhhcC--CCHHHHHHHHHHHHHHHHHHH----hCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc--
Confidence 9999999998643 788999999999999999999 68999999999999999999999999999876543322
Q ss_pred eeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhh
Q 005040 586 IQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQ 665 (717)
Q Consensus 586 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (717)
......+++.|+|||+..+..++.++||||||+++||+++|+.||........ ... ... ...+
T Consensus 171 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~-~~~-~~~---------------~~~~ 233 (293)
T cd06647 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LYL-IAT---------------NGTP 233 (293)
T ss_pred ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh-eee-hhc---------------CCCC
Confidence 12334578899999998888899999999999999999999999965322110 000 000 0000
Q ss_pred hhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 666 AFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 666 ~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
........+..+.+++.+||..+|++||++.+++..
T Consensus 234 ~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 234 ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111112234568899999999999999999999875
No 263
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.5e-35 Score=302.51 Aligned_cols=254 Identities=26% Similarity=0.382 Sum_probs=198.2
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh----------HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCC
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL----------ERAFRSFDSECEILRNVRHRNLLKILGSCSNLD 496 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----------~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~ 496 (717)
+|...+.||+|+||.||+|... +++.||+|.++... ....+.+.+|+.+++.++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4677889999999999999864 78999999875321 112346788999999999999999999999999
Q ss_pred eeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeecccc
Q 005040 497 FKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISK 576 (717)
Q Consensus 497 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 576 (717)
..++||||+++++|.++++... .+++..+..++.|++.||.||| +.+++||||+|+||+++.++.++++|||++.
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~ 156 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYG-RFEEQLVRFFTEQVLEGLAYLH----SKGILHRDLKADNLLVDADGICKISDFGISK 156 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHh----hCCeeecCCChhhEEEcCCCeEEEeeccccc
Confidence 9999999999999999998764 4889999999999999999999 6789999999999999999999999999987
Q ss_pred ccCCCCCceeeeccccCccccCCCccCCCC--cCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhh
Q 005040 577 LLGEGEDSVIQTMTMATIGYMAPEYGSEGI--VSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTE 654 (717)
Q Consensus 577 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~--~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (717)
...............++..|+|||...... ++.++|+||||+++||+++|..||..... ...+... .......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~----~~~~~~~-~~~~~~~ 231 (272)
T cd06629 157 KSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA----IAAMFKL-GNKRSAP 231 (272)
T ss_pred cccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch----HHHHHHh-hccccCC
Confidence 654322111123345788999999876654 88999999999999999999999864211 1111110 0000000
Q ss_pred hccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 655 VVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.+... ...+++.++.+++.+|+..+|++||++.++++
T Consensus 232 ~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 232 PIPPD---------VSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred cCCcc---------ccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 00000 01134567889999999999999999999886
No 264
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=2.3e-35 Score=303.57 Aligned_cols=266 Identities=23% Similarity=0.271 Sum_probs=202.8
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
+|++.+.||+|+||.||+|... +|+.||+|++.... ......+.+|+.++++++||||+++++++.+....++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4788899999999999999975 78999999987553 33346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
+ +++|.+++......+++..+..++.|+++||+||| +.+++|+||||+||+++.++.++|+|||++........
T Consensus 81 ~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~- 154 (286)
T cd07832 81 M-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMH----ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP- 154 (286)
T ss_pred c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-
Confidence 9 99999999876667999999999999999999999 67899999999999999999999999999987654321
Q ss_pred eeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCC----chhhhccc-
Q 005040 585 VIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPH----RLTEVVDA- 658 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~- 658 (717)
.......++..|+|||++.+ ..++.++||||+|+++|||++|++||....+. ..+ .++...... .+.+..+.
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07832 155 RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI-EQL-AIVFRTLGTPNEETWPGLTSLP 232 (286)
T ss_pred CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH-HHH-HHHHHHcCCCChHHHhhccCcc
Confidence 11233468899999998765 44689999999999999999998887653221 111 111111110 00000000
Q ss_pred -----cchhhhh-hh-hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 659 -----NLVREEQ-AF-SDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 659 -----~~~~~~~-~~-~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
....... .. ....+.+.++.+++.+|++.+|++||+++++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 233 DYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred hhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000000 00 0001334678999999999999999999999763
No 265
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.8e-35 Score=304.41 Aligned_cols=265 Identities=22% Similarity=0.257 Sum_probs=200.3
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLE 503 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 503 (717)
++|+..+.||+|+||.||+|..+ +++.||+|++.... ....+.+.+|++++++++|||++++++++.+....++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 36888899999999999999976 68999999886442 1223567889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 504 FMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 504 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
|++++.|..+..... .+++..+..++.|++.||+||| +.+++||||||+||+++.++.++|+|||++........
T Consensus 81 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~ql~~~l~~LH----~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 81 YCDHTVLNELEKNPR-GVPEHLIKKIIWQTLQAVNFCH----KHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred ccCccHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHH----HCCceecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence 999988887765443 4899999999999999999999 67899999999999999999999999999987654321
Q ss_pred ceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHH---hhCCCchhhhccc-
Q 005040 584 SVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVK---ESLPHRLTEVVDA- 658 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~- 658 (717)
......++..|+|||++.+ ..++.++||||||+++|||++|+.||.+....+. ...... ...+ ...+..+.
T Consensus 156 --~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~ 231 (286)
T cd07847 156 --DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQ-LYLIRKTLGDLIP-RHQQIFSTN 231 (286)
T ss_pred --cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCh-HHhhhcccc
Confidence 1223357888999998765 5688999999999999999999999976432211 111111 0000 00000000
Q ss_pred ---------cchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 659 ---------NLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 659 ---------~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
...............+..+.+++.+||+.+|++||++.|++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 232 QFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred cccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 000000000001133567889999999999999999999875
No 266
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=6.7e-36 Score=307.81 Aligned_cols=249 Identities=23% Similarity=0.307 Sum_probs=199.3
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccC
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMP 506 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 506 (717)
.|.....||+|+||.||++... ++..||+|.+........+.+.+|+.+++.++||||+++++.+...+..++||||++
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~ 102 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLE 102 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCC
Confidence 3344467999999999999865 688999999876555556778899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCcee
Q 005040 507 NGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVI 586 (717)
Q Consensus 507 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~ 586 (717)
+++|.+++... .+++..+..++.|++.|+.||| +.+|+||||||+||+++.++.++|+|||++........ .
T Consensus 103 ~~~L~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH----~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~--~ 174 (292)
T cd06658 103 GGALTDIVTHT--RMNEEQIATVCLSVLRALSYLH----NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP--K 174 (292)
T ss_pred CCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH----HCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc--c
Confidence 99999988654 3789999999999999999999 67899999999999999999999999999876532221 1
Q ss_pred eeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhh
Q 005040 587 QTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQA 666 (717)
Q Consensus 587 ~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (717)
.....++..|+|||+..+..++.++||||||+++|||++|+.||...... .....+....+ ...
T Consensus 175 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--~~~~~~~~~~~--------~~~------ 238 (292)
T cd06658 175 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL--QAMRRIRDNLP--------PRV------ 238 (292)
T ss_pred CceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhcCC--------Ccc------
Confidence 12345789999999998888999999999999999999999998652211 11111111111 110
Q ss_pred hhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 667 FSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 667 ~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
......+..+.+++.+|+..||++|||++|+++.
T Consensus 239 -~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 239 -KDSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred -ccccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0111234567899999999999999999999874
No 267
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=8.2e-36 Score=312.99 Aligned_cols=240 Identities=23% Similarity=0.212 Sum_probs=185.6
Q ss_pred ccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhc---CCCceeeEeeeeecCCeeEEEEEccCC
Q 005040 435 LGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNV---RHRNLLKILGSCSNLDFKALVLEFMPN 507 (717)
Q Consensus 435 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l---~hpniv~~~~~~~~~~~~~lv~e~~~~ 507 (717)
||+|+||+||+|+.. +++.||+|++.... .........|..++... +||+|+++++++.+....|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999875 68999999997543 22233445567777665 699999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceee
Q 005040 508 GSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQ 587 (717)
Q Consensus 508 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 587 (717)
|+|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.++|+|||++........ ..
T Consensus 81 g~L~~~l~~~~-~~~~~~~~~~~~qil~al~~LH----~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~--~~ 153 (330)
T cd05586 81 GELFWHLQKEG-RFSEDRAKFYIAELVLALEHLH----KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNK--TT 153 (330)
T ss_pred ChHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCC--Cc
Confidence 99999988654 4899999999999999999999 68899999999999999999999999999875432221 12
Q ss_pred eccccCccccCCCccCCC-CcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhh
Q 005040 588 TMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQA 666 (717)
Q Consensus 588 ~~~~~t~~y~aPE~~~~~-~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (717)
....||+.|+|||++.+. .++.++||||+||++|||++|+.||..... .+......... ..+.
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~-----~~~~~~i~~~~------~~~~----- 217 (330)
T cd05586 154 NTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT-----QQMYRNIAFGK------VRFP----- 217 (330)
T ss_pred cCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH-----HHHHHHHHcCC------CCCC-----
Confidence 345689999999987654 489999999999999999999999865321 11111100000 0000
Q ss_pred hhhhHHHHHHHHHHHhhccCCCCCCCCC----HHHHHH
Q 005040 667 FSDKMDCLFSIMDLALDCCMDTPHKRIH----MTDAAA 700 (717)
Q Consensus 667 ~~~~~~~~~~l~~li~~cl~~~P~~Rpt----~~ev~~ 700 (717)
...++.++.+++.+||+.||.+||+ +.++++
T Consensus 218 ---~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 218 ---KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred ---CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 0123455779999999999999995 555543
No 268
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.1e-35 Score=310.26 Aligned_cols=195 Identities=30% Similarity=0.363 Sum_probs=169.4
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcC-C-----CceeeEeeeeecCCeeE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVR-H-----RNLLKILGSCSNLDFKA 499 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-----pniv~~~~~~~~~~~~~ 499 (717)
-+|++.+.||+|.||.|-+|... +++.||||+++.... -.++...|+.+|..++ | -|+|+++++|...++.|
T Consensus 186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlc 264 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLC 264 (586)
T ss_pred EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccccee
Confidence 38899999999999999999864 799999999986643 3455677999999996 4 38999999999999999
Q ss_pred EEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC--cEEEeeecccc
Q 005040 500 LVLEFMPNGSLEKWLYSHN-YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENM--VAHVSDFGISK 576 (717)
Q Consensus 500 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~--~~kl~Dfgl~~ 576 (717)
||+|.+. -+|+++++.+. ..++...++.++.||+.||.+|| +.+|||+||||+|||+.+.. .+||+|||+|+
T Consensus 265 iVfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~----~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc 339 (586)
T KOG0667|consen 265 IVFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLH----ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSC 339 (586)
T ss_pred eeehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeeccCChhheeeccCCcCceeEEeccccc
Confidence 9999995 59999999653 44899999999999999999999 67899999999999997433 79999999999
Q ss_pred ccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCc
Q 005040 577 LLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDE 632 (717)
Q Consensus 577 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~ 632 (717)
....... ...-+..|+|||++.+.+|+.+.||||||||++||++|.+-|.+
T Consensus 340 ~~~q~vy-----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG 390 (586)
T KOG0667|consen 340 FESQRVY-----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPG 390 (586)
T ss_pred ccCCcce-----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCC
Confidence 8654433 23457789999999999999999999999999999999877765
No 269
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=3.9e-35 Score=296.93 Aligned_cols=250 Identities=32% Similarity=0.530 Sum_probs=201.3
Q ss_pred CCccccccccccEEEEEEEecC-----CCeEEEEEechhhHH-HHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 429 FNECNLLGTGGFGSVYKGTLSD-----GTNVAIKIFNLQLER-AFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 429 ~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
+++.+.||.|+||.||++...+ +..||+|++...... ..+.+.+|+++++.++||||+++++++.+.+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3567889999999999999753 378999999755432 5678899999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhhCCCC-CCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCC
Q 005040 503 EFMPNGSLEKWLYSHNYF-LDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEG 581 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~-~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 581 (717)
||+++++|.+++...... +++..+..++.|++.|++||| +.+++|+||+|+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh----~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLE----SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDD 156 (258)
T ss_pred eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHh----cCCeeecccccceEEEccCCeEEEcccCCceecccc
Confidence 999999999999865444 899999999999999999999 679999999999999999999999999999876544
Q ss_pred CCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccc
Q 005040 582 EDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANL 660 (717)
Q Consensus 582 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (717)
..... ....+++.|+|||...+..++.++||||+|+++|||++ |+.||..... ....+.+......
T Consensus 157 ~~~~~-~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~--~~~~~~~~~~~~~---------- 223 (258)
T smart00219 157 DYYKK-KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN--EEVLEYLKKGYRL---------- 223 (258)
T ss_pred ccccc-ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHhcCCCC----------
Confidence 22211 12236789999999988889999999999999999998 7888765211 1111111110000
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 005040 661 VREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKL 702 (717)
Q Consensus 661 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L 702 (717)
.....++.++.+++.+|+..+|++|||+.|+++.|
T Consensus 224 -------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 224 -------PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -------CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 00112456688999999999999999999998764
No 270
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7e-36 Score=298.81 Aligned_cols=249 Identities=22% Similarity=0.328 Sum_probs=209.6
Q ss_pred HhccCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEE
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALV 501 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv 501 (717)
+.+-|+..+.||+|.|+.|-+|++- +|..||||++.+.. .-....+.+|+++|+-++|||||++|++......+|+|
T Consensus 16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLi 95 (864)
T KOG4717|consen 16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLI 95 (864)
T ss_pred eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEE
Confidence 3467888899999999999999864 89999999998765 33446788899999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeC-CCCcEEEeeeccccccCC
Q 005040 502 LEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLD-ENMVAHVSDFGISKLLGE 580 (717)
Q Consensus 502 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfgl~~~~~~ 580 (717)
.|.-.+|+|.+|+-++...+.+.-..+++.||+.|+.|+|+.| +|||||||+||.+- .-|-|||+|||++..+.+
T Consensus 96 LELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLH----VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P 171 (864)
T KOG4717|consen 96 LELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLH----VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP 171 (864)
T ss_pred EEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhh----hhcccCCcceeEEeeecCceEeeeccccccCCC
Confidence 9999999999999988777999999999999999999999655 99999999998775 688999999999987765
Q ss_pred CCCceeeeccccCccccCCCccCCCCcC-cccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhcccc
Q 005040 581 GEDSVIQTMTMATIGYMAPEYGSEGIVS-TKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDAN 659 (717)
Q Consensus 581 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~-~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (717)
+.. -...+|+..|-|||.+.+..|+ ++.||||+|||+|-+++|+.||....+.+. +..++|=.
T Consensus 172 G~k---L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET-------------LTmImDCK 235 (864)
T KOG4717|consen 172 GKK---LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET-------------LTMIMDCK 235 (864)
T ss_pred cch---hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh-------------hhhhhccc
Confidence 443 3556899999999999888875 679999999999999999999987443321 22233322
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 660 LVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 660 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
+ ..+...+.+..++|..|+.-||.+|.+.+|++.
T Consensus 236 Y-------tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 236 Y-------TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred c-------cCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 2 223345667789999999999999999998864
No 271
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=3.3e-35 Score=298.84 Aligned_cols=250 Identities=25% Similarity=0.316 Sum_probs=194.8
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh-----HHHHHHHHHHHHHHHhcCCCceeeEeeeeec--CCee
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-----ERAFRSFDSECEILRNVRHRNLLKILGSCSN--LDFK 498 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~--~~~~ 498 (717)
.+|+..+.||+|+||.||+|... +++.||+|++.... .+....+.+|+.+++.++||||+++++++.+ ....
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 36888999999999999999865 68999999875331 2344568889999999999999999998865 3567
Q ss_pred EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeecccccc
Q 005040 499 ALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLL 578 (717)
Q Consensus 499 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 578 (717)
++++||+++++|.+++..... +++..+..++.|++.||+||| +.+++||||+|+||+++.++.++|+|||++...
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~-l~~~~~~~~~~qi~~~l~~LH----~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~ 156 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGA-LTESVTRKYTRQILEGMSYLH----SNMIVHRDIKGANILRDSAGNVKLGDFGASKRL 156 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH----hCCeeeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence 899999999999999986543 789999999999999999999 678999999999999999999999999998765
Q ss_pred CCCCCc-eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhcc
Q 005040 579 GEGEDS-VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVD 657 (717)
Q Consensus 579 ~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (717)
...... .......++..|+|||++.+..++.++||||+||++|||++|+.||...... .. +....... ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~----~~-~~~~~~~~----~~ 227 (266)
T cd06651 157 QTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM----AA-IFKIATQP----TN 227 (266)
T ss_pred ccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH----HH-HHHHhcCC----CC
Confidence 432111 1112345788999999999888999999999999999999999999753211 11 11100000 00
Q ss_pred ccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 658 ANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
+.+ +..+...+.+++ .||..+|++||+++|+++
T Consensus 228 ~~~---------~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 228 PQL---------PSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred CCC---------chhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 111 112234466777 688899999999999975
No 272
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.8e-36 Score=303.65 Aligned_cols=257 Identities=23% Similarity=0.336 Sum_probs=206.8
Q ss_pred HHHhccCCccccccccccEEEEEEEecCCCeEEEEEechhh--HHHHHHHHHHHHHHHhcC-CCceeeEeeeeecCCeeE
Q 005040 423 RRATDEFNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQL--ERAFRSFDSECEILRNVR-HRNLLKILGSCSNLDFKA 499 (717)
Q Consensus 423 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-hpniv~~~~~~~~~~~~~ 499 (717)
......|++.++||.||.+.||++...+.+.+|+|.+.... .+....|..|+..|.+++ |.+||++++|-..++.+|
T Consensus 357 ~Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lY 436 (677)
T KOG0596|consen 357 KVKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLY 436 (677)
T ss_pred EECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEE
Confidence 33456899999999999999999998888888888664332 556678999999999995 999999999999999999
Q ss_pred EEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccC
Q 005040 500 LVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLG 579 (717)
Q Consensus 500 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 579 (717)
|||||= ..||..++++.....+...+..+..|++.|+.++| ..||||.||||.|+|+-. |.+||+|||.|.-+.
T Consensus 437 mvmE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH----~~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~ 510 (677)
T KOG0596|consen 437 MVMECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIH----QHGIVHSDLKPANFLLVK-GRLKLIDFGIANAIQ 510 (677)
T ss_pred EEeecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHH----HhceeecCCCcccEEEEe-eeEEeeeechhcccC
Confidence 999986 45999999987665664478889999999999999 689999999999999865 589999999999988
Q ss_pred CCCCceeeeccccCccccCCCccCCC-----------CcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhC
Q 005040 580 EGEDSVIQTMTMATIGYMAPEYGSEG-----------IVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESL 648 (717)
Q Consensus 580 ~~~~~~~~~~~~~t~~y~aPE~~~~~-----------~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 648 (717)
.+..+......+||+.||+||.+... ..++++||||+|||+|+|+.|+.||..... .|.+
T Consensus 511 ~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n------~~aK--- 581 (677)
T KOG0596|consen 511 PDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN------QIAK--- 581 (677)
T ss_pred ccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH------HHHH---
Confidence 87777777778999999999954332 256789999999999999999999975211 2222
Q ss_pred CCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 649 PHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
+..+.++.-.-+++..+... ++.++++.||..||.+|||+.|+++.
T Consensus 582 ---l~aI~~P~~~Iefp~~~~~~----~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 582 ---LHAITDPNHEIEFPDIPEND----ELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred ---HHhhcCCCccccccCCCCch----HHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 22333333222233333322 28899999999999999999999863
No 273
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=3e-35 Score=302.19 Aligned_cols=249 Identities=26% Similarity=0.338 Sum_probs=193.0
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHH-HHhcCCCceeeEeeeeecCCeeEEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEI-LRNVRHRNLLKILGSCSNLDFKALVLE 503 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~-l~~l~hpniv~~~~~~~~~~~~~lv~e 503 (717)
++|++.+.||+|+||.||+|... +|+.||+|+++... .+....+..|+.. ++.++||||+++++++......++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 36888999999999999999976 79999999987543 2222345556554 666789999999999999999999999
Q ss_pred ccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC-CeEecCCCCCCeeeCCCCcEEEeeeccccccC
Q 005040 504 FMPNGSLEKWLYS---HNYFLDILQRLNIMIDVGSALEYLHHCHSSA-PIIHCDLKPTNILLDENMVAHVSDFGISKLLG 579 (717)
Q Consensus 504 ~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~-~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 579 (717)
|++ |+|.+++.. ....+++..+..++.|++.|++||| ++ +++||||||+||+++.++.+||+|||++....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~ 155 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLH----SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLV 155 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh----hcCCeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence 996 688888764 2346899999999999999999999 44 89999999999999999999999999988653
Q ss_pred CCCCceeeeccccCccccCCCccCC----CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhh
Q 005040 580 EGEDSVIQTMTMATIGYMAPEYGSE----GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEV 655 (717)
Q Consensus 580 ~~~~~~~~~~~~~t~~y~aPE~~~~----~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (717)
... ......++..|+|||.+.+ ..++.++|+||||+++|||++|+.||.........+.......
T Consensus 156 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-------- 224 (283)
T cd06617 156 DSV---AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEP-------- 224 (283)
T ss_pred ccc---ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcC--------
Confidence 221 1223457889999998754 4568899999999999999999999864222111111111100
Q ss_pred ccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 656 VDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.+.+ ....++.++.+++.+||..+|++||++.++++
T Consensus 225 -~~~~--------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 225 -SPQL--------PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred -CCCC--------CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000 01124566889999999999999999999986
No 274
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=3e-35 Score=299.78 Aligned_cols=252 Identities=25% Similarity=0.366 Sum_probs=200.1
Q ss_pred cCCccccccccccEEEEEEEecC--CCeEEEEEechh----------hHHHHHHHHHHHHHHHh-cCCCceeeEeeeeec
Q 005040 428 EFNECNLLGTGGFGSVYKGTLSD--GTNVAIKIFNLQ----------LERAFRSFDSECEILRN-VRHRNLLKILGSCSN 494 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~----------~~~~~~~~~~e~~~l~~-l~hpniv~~~~~~~~ 494 (717)
+|++.+.||+|+||.||+|..+. ++.+|+|.+... .......+.+|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47788999999999999999764 688999987532 12334557778888875 699999999999999
Q ss_pred CCeeEEEEEccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEee
Q 005040 495 LDFKALVLEFMPNGSLEKWLYS---HNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSD 571 (717)
Q Consensus 495 ~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~D 571 (717)
.+..++||||+++++|.+++.. ....+++..++.++.|++.|+.|||+ ..+++|+||+|+||+++.++.++|+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~~i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK---EKRIVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc---CCceeecCCCHHHEEECCCCcEEEec
Confidence 9999999999999999998853 34568999999999999999999993 35799999999999999999999999
Q ss_pred eccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCc
Q 005040 572 FGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHR 651 (717)
Q Consensus 572 fgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 651 (717)
||.+....... ......++..|+|||+..+..++.++||||||+++|||++|+.||..... ......+.. ..
T Consensus 158 fg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~--~~~~~~~~~---~~ 229 (269)
T cd08528 158 FGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM--LSLATKIVE---AV 229 (269)
T ss_pred ccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH--HHHHHHHhh---cc
Confidence 99998764432 22345688899999999888899999999999999999999999864211 111111110 00
Q ss_pred hhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 005040 652 LTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLR 703 (717)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~ 703 (717)
... .....++.++.+++.+||+.||++||++.|+.++++
T Consensus 230 ~~~-------------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 230 YEP-------------LPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred CCc-------------CCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 000 001123456889999999999999999999999875
No 275
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-36 Score=280.97 Aligned_cols=252 Identities=23% Similarity=0.286 Sum_probs=201.0
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcC-CCceeeEeeeeecCCeeEEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVR-HRNLLKILGSCSNLDFKALVLE 503 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-hpniv~~~~~~~~~~~~~lv~e 503 (717)
++.+.+..||.|..|.||++..+ +|...|||.+.... ++..+++...++++..-+ +|.||+.+|||.....+++.||
T Consensus 92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe 171 (391)
T KOG0983|consen 92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME 171 (391)
T ss_pred HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence 34455678999999999999976 68999999997654 445566777777777664 8999999999999888999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 504 FMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 504 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
.|. ..+...++.-..++++..+-++...+..||.||.+ .++|+|||+||+|||+|+.|++|+||||.+.++-+.
T Consensus 172 lMs-~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKe---KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS-- 245 (391)
T KOG0983|consen 172 LMS-TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS-- 245 (391)
T ss_pred HHH-HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHH---hcceeecccCccceEEccCCCEEeecccccceeecc--
Confidence 984 36677777666779999889999999999999998 568999999999999999999999999999877543
Q ss_pred ceeeeccccCccccCCCccCC---CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccc
Q 005040 584 SVIQTMTMATIGYMAPEYGSE---GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANL 660 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~~~---~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (717)
...+...|-+.|||||.+.. ..|+.++||||||+.++|+.||+.||..-.. ++....-+...
T Consensus 246 -kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~t-dFe~ltkvln~------------- 310 (391)
T KOG0983|consen 246 -KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKT-DFEVLTKVLNE------------- 310 (391)
T ss_pred -cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCc-cHHHHHHHHhc-------------
Confidence 33455678899999997754 4689999999999999999999999986322 22222222211
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 661 VREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 661 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
+.+..+....++..+.+++..|+..|+.+||...++++.
T Consensus 311 --ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 311 --EPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred --CCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 112223334467789999999999999999999988763
No 276
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=2.5e-35 Score=303.98 Aligned_cols=267 Identities=22% Similarity=0.311 Sum_probs=198.4
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhhH-HHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLE-RAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
++|+..+.||+|+||.||+|..+ +++.||+|.+..... .....+.+|++++++++||||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 67889999999999999999976 789999999865432 1224467899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
+. ++|.+++......+++..+..++.|+++||.||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 85 ~~-~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH----~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~- 158 (291)
T cd07844 85 LD-TDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCH----QRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK- 158 (291)
T ss_pred CC-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeecccCCHHHEEEcCCCCEEECccccccccCCCCc-
Confidence 97 4999999876667899999999999999999999 67899999999999999999999999999875432211
Q ss_pred eeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhC-C--Cchhhhcc---
Q 005040 585 VIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESL-P--HRLTEVVD--- 657 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~--- 657 (717)
......++..|+|||+..+ ..++.++||||+|+++|||++|+.||.................. + ........
T Consensus 159 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (291)
T cd07844 159 -TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPE 237 (291)
T ss_pred -cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccc
Confidence 1122346788999998765 55889999999999999999999999653311111111111000 0 00000000
Q ss_pred ---cc---c-hhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 658 ---AN---L-VREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 658 ---~~---~-~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.. . ...............++.+++.+|++.+|++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 238 FKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred cccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 00 0 0000000000111256789999999999999999999875
No 277
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.7e-35 Score=298.82 Aligned_cols=246 Identities=30% Similarity=0.517 Sum_probs=198.3
Q ss_pred ccCCccccccccccEEEEEEEecCCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccC
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMP 506 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 506 (717)
++|++.+.||+|+||.||++.. +++.||+|.+.... ..+.+.+|+.+++.++|||++++++++...+ .++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHNG-LYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCC-cEEEEECCC
Confidence 5788999999999999999975 67889999986543 2357888999999999999999999987654 699999999
Q ss_pred CCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCce
Q 005040 507 NGSLEKWLYSHN-YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSV 585 (717)
Q Consensus 507 ~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 585 (717)
+++|.+++.... ..+++..+..++.|++.|+.||| +.+++||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH----~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~--- 154 (254)
T cd05083 82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLE----SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV--- 154 (254)
T ss_pred CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH----hCCeeccccCcceEEEcCCCcEEECCCccceeccccC---
Confidence 999999998653 35789999999999999999999 6789999999999999999999999999987643221
Q ss_pred eeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhh
Q 005040 586 IQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREE 664 (717)
Q Consensus 586 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (717)
.....+..|+|||+..+..++.++|+||||+++|||++ |+.||...... .....+... ..
T Consensus 155 --~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~------------~~--- 215 (254)
T cd05083 155 --DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK--EVKECVEKG------------YR--- 215 (254)
T ss_pred --CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH--HHHHHHhCC------------CC---
Confidence 12234567999999988899999999999999999998 99998653221 111111110 00
Q ss_pred hhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 005040 665 QAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRK 704 (717)
Q Consensus 665 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~ 704 (717)
......++..+.+++.+||+.+|++||+++++++.|++
T Consensus 216 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 216 --MEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred --CCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 00112345668899999999999999999999998863
No 278
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=2.1e-35 Score=301.60 Aligned_cols=254 Identities=28% Similarity=0.475 Sum_probs=198.2
Q ss_pred CCccccccccccEEEEEEEec----CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCC------
Q 005040 429 FNECNLLGTGGFGSVYKGTLS----DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLD------ 496 (717)
Q Consensus 429 ~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~------ 496 (717)
|.+.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+++++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 566789999999999999853 46889999886543 334567889999999999999999999875432
Q ss_pred eeEEEEEccCCCCHHHHHhhC-----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEee
Q 005040 497 FKALVLEFMPNGSLEKWLYSH-----NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSD 571 (717)
Q Consensus 497 ~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~D 571 (717)
..++++||+.+|+|.+++... ...+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+|++|
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH----~~~i~H~dikp~nili~~~~~~kl~d 156 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS----SKNFIHRDLAARNCMLNENMTVCVAD 156 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH----hCCEeecccchhhEEEcCCCCEEECc
Confidence 247889999999999887532 234788999999999999999999 67899999999999999999999999
Q ss_pred eccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCC
Q 005040 572 FGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPH 650 (717)
Q Consensus 572 fgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 650 (717)
||+++...............++..|++||......++.++||||||+++|||++ |+.||..... .....++....
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~~~-- 232 (273)
T cd05074 157 FGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN--SEIYNYLIKGN-- 232 (273)
T ss_pred ccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH--HHHHHHHHcCC--
Confidence 999987643322211222345678999999988889999999999999999999 8888865322 11122211100
Q ss_pred chhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 005040 651 RLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKI 705 (717)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~ 705 (717)
. . .....++..+.+++.+|++.+|++||++.++++.|+++
T Consensus 233 ~--------~-------~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 233 R--------L-------KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred c--------C-------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0 0 00112345688999999999999999999999999876
No 279
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=6.2e-35 Score=297.06 Aligned_cols=252 Identities=20% Similarity=0.325 Sum_probs=186.5
Q ss_pred ccccccccEEEEEEEecCC---CeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCCC
Q 005040 433 NLLGTGGFGSVYKGTLSDG---TNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPNG 508 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 508 (717)
+.||+|+||.||+|+..++ ..+++|.+.... ....+.+.+|+.+++.++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 3699999999999975433 345677665433 334567899999999999999999999999999999999999999
Q ss_pred CHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCce
Q 005040 509 SLEKWLYSHN---YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSV 585 (717)
Q Consensus 509 ~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 585 (717)
+|.+++++.. ...++..+..++.|+++||+||| +.+++||||||+||+++.++.++|+|||++..........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH----~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 156 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMH----KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIE 156 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH----HCCeeccCCccceEEEcCCccEEecccccccccCcchhhh
Confidence 9999998542 33567778899999999999999 6789999999999999999999999999986432211111
Q ss_pred eeeccccCccccCCCccCC-------CCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhCCCchhhhcc
Q 005040 586 IQTMTMATIGYMAPEYGSE-------GIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVD 657 (717)
Q Consensus 586 ~~~~~~~t~~y~aPE~~~~-------~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (717)
......++..|+|||+... ..++.++||||||+++|||++ |..||...... ..+...... ......+
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-~~~~~~~~~----~~~~~~~ 231 (268)
T cd05086 157 TEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR-EVLNHVIKD----QQVKLFK 231 (268)
T ss_pred cccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHhh----cccccCC
Confidence 1234467889999998643 345789999999999999997 56677542211 111111111 1111111
Q ss_pred ccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 005040 658 ANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLR 703 (717)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~ 703 (717)
+.+. ..+...+.+++..|| .+|++||+++++++.|.
T Consensus 232 ~~~~---------~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 232 PQLE---------LPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CccC---------CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 1111 113355778999999 67999999999998874
No 280
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=4.9e-35 Score=296.22 Aligned_cols=247 Identities=27% Similarity=0.359 Sum_probs=200.0
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh-----HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEE
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-----ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALV 501 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv 501 (717)
+|+..+.||+|+||.||+|... +++.|++|.+.... .+..+.+.+|+++++.++||||+++++++.+....++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4677789999999999999976 78999999886533 33456788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCC
Q 005040 502 LEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEG 581 (717)
Q Consensus 502 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 581 (717)
+||+++++|.+++.... .+++..+..++.|+++|++||| +.+++|+||+|+||+++.++.+||+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~ 155 (258)
T cd06632 81 LELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGLEYLH----DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEF 155 (258)
T ss_pred EEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEEccCccceecccc
Confidence 99999999999998654 4789999999999999999999 678999999999999999999999999998765433
Q ss_pred CCceeeeccccCccccCCCccCCCC-cCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccc
Q 005040 582 EDSVIQTMTMATIGYMAPEYGSEGI-VSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANL 660 (717)
Q Consensus 582 ~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (717)
. ......++..|+|||...... ++.++|+||||+++|+|++|+.||....... ....+.... ...
T Consensus 156 ~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~---~~~------- 221 (258)
T cd06632 156 S---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA-AVFKIGRSK---ELP------- 221 (258)
T ss_pred c---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH-HHHHHHhcc---cCC-------
Confidence 2 123445788999999887766 8999999999999999999999987532110 011100000 000
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 661 VREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 661 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
. .+..+..++.+++.+||+.+|.+||++.+++.
T Consensus 222 -----~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 222 -----P--IPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred -----C--cCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 0 01123456789999999999999999999875
No 281
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=2.6e-35 Score=304.94 Aligned_cols=266 Identities=25% Similarity=0.275 Sum_probs=200.0
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhhH-----HHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEE
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLE-----RAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALV 501 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv 501 (717)
+|+..+.||+|+||.||+|... +++.||+|.+..... .....+..|+++++.++||||+++++++.+....++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4778889999999999999975 789999999875432 2334567899999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCC
Q 005040 502 LEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEG 581 (717)
Q Consensus 502 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 581 (717)
|||+ +|+|.+++......+++..+..++.|+++||.||| +.+|+|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH----~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLH----SNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSP 155 (298)
T ss_pred Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeecCCChhhEEEcCCCCEEEccceeeeeccCC
Confidence 9999 89999999876546899999999999999999999 688999999999999999999999999999876543
Q ss_pred CCceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhC-C--Cchh---h
Q 005040 582 EDSVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESL-P--HRLT---E 654 (717)
Q Consensus 582 ~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~-~--~~~~---~ 654 (717)
... .....+++.|+|||.+.+ ..++.++|||||||++|||++|.+||..... ...+........ + .... .
T Consensus 156 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 232 (298)
T cd07841 156 NRK--MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSD-IDQLGKIFEALGTPTEENWPGVTS 232 (298)
T ss_pred Ccc--ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCcc-HHHHHHHHHHcCCCchhhhhhccc
Confidence 221 123346788999998754 5678999999999999999999887764321 111111111100 0 0000 0
Q ss_pred hccccch---hhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 655 VVDANLV---REEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 655 ~~~~~~~---~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
..+.... ............+.++.+++.+||+.+|++|||++|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 233 LPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0000000 0000000112335678899999999999999999999873
No 282
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.2e-35 Score=306.70 Aligned_cols=248 Identities=23% Similarity=0.312 Sum_probs=198.8
Q ss_pred CCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCC
Q 005040 429 FNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPN 507 (717)
Q Consensus 429 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 507 (717)
|+....||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++|||++++++++...+..++|+||+++
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~ 102 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQG 102 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCC
Confidence 334457999999999999865 7899999998755444456788899999999999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceee
Q 005040 508 GSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQ 587 (717)
Q Consensus 508 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 587 (717)
++|.+++... .+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++........ ..
T Consensus 103 ~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH----~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~--~~ 174 (297)
T cd06659 103 GALTDIVSQT--RLNEEQIATVCESVLQALCYLH----SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP--KR 174 (297)
T ss_pred CCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccc--cc
Confidence 9999988653 3889999999999999999999 67899999999999999999999999999875533221 12
Q ss_pred eccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhh
Q 005040 588 TMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAF 667 (717)
Q Consensus 588 ~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (717)
....++..|+|||+..+..++.++||||||+++|||++|+.||..... ...........+...
T Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~~~~--------------- 237 (297)
T cd06659 175 KSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP--VQAMKRLRDSPPPKL--------------- 237 (297)
T ss_pred cceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHhccCCCCc---------------
Confidence 334688999999999888899999999999999999999999864221 111111111100000
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 668 SDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 668 ~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
......+.++.+++.+|++.+|++||+++++++.
T Consensus 238 ~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 238 KNAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred cccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0011234557899999999999999999999884
No 283
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.8e-35 Score=302.40 Aligned_cols=253 Identities=25% Similarity=0.337 Sum_probs=199.9
Q ss_pred HHhccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCC-----
Q 005040 424 RATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNV-RHRNLLKILGSCSNLD----- 496 (717)
Q Consensus 424 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~----- 496 (717)
..+++|++.+.||+|+||.||+|..+ +++.+++|++..... ..+.+.+|+++++++ .||||+++++++.+..
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 35689999999999999999999975 678999999875543 336788999999999 7999999999986543
Q ss_pred -eeEEEEEccCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeee
Q 005040 497 -FKALVLEFMPNGSLEKWLYSH---NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDF 572 (717)
Q Consensus 497 -~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 572 (717)
..++||||+++++|.+++... +..+++..+..++.|+++||.||| +.+++|+||+|+||+++.++.++|+||
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH----~~~i~H~~l~p~ni~~~~~~~~~l~d~ 157 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH----ENKVIHRDIKGQNILLTKNAEVKLVDF 157 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHh----cCCcccCCCCHHHEEEccCCeEEECCC
Confidence 489999999999999998743 356899999999999999999999 688999999999999999999999999
Q ss_pred ccccccCCCCCceeeeccccCccccCCCccCC-----CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhh
Q 005040 573 GISKLLGEGEDSVIQTMTMATIGYMAPEYGSE-----GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKES 647 (717)
Q Consensus 573 gl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-----~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 647 (717)
|++....... .......++..|+|||++.. ..++.++||||||+++|+|++|+.||...... ........
T Consensus 158 ~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~-- 232 (275)
T cd06608 158 GVSAQLDSTL--GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM-RALFKIPR-- 232 (275)
T ss_pred ccceecccch--hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH-HHHHHhhc--
Confidence 9987654322 11233458889999997643 45788999999999999999999999643211 11111100
Q ss_pred CCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 648 LPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.. .+ .......++.++.+++.+||..||++|||+.|+++
T Consensus 233 --~~-----~~-------~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 233 --NP-----PP-------TLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred --cC-----CC-------CCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 00 00 11112234567889999999999999999999975
No 284
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=2.8e-35 Score=303.64 Aligned_cols=257 Identities=26% Similarity=0.318 Sum_probs=199.9
Q ss_pred HHHHHHhccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhc-CCCceeeEeeeeecC--
Q 005040 420 LDIRRATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNV-RHRNLLKILGSCSNL-- 495 (717)
Q Consensus 420 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~-- 495 (717)
.++..+.++|++.+.||+|+||.||+|... +++.+|+|++.... .....+.+|+.+++++ +|||++++++++...
T Consensus 15 ~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~ 93 (291)
T cd06639 15 ESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADK 93 (291)
T ss_pred ccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccc
Confidence 445556789999999999999999999874 78899999986432 2235677899999999 899999999998643
Q ss_pred ---CeeEEEEEccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEE
Q 005040 496 ---DFKALVLEFMPNGSLEKWLYS---HNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHV 569 (717)
Q Consensus 496 ---~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl 569 (717)
+..++||||+++|+|.++++. ....+++..++.++.|++.||+||| +.+++||||||+||+++.++.+||
T Consensus 94 ~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH----~~~ivH~dlkp~nili~~~~~~kl 169 (291)
T cd06639 94 LVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLH----NNRIIHRDVKGNNILLTTEGGVKL 169 (291)
T ss_pred cCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHEEEcCCCCEEE
Confidence 357999999999999998863 3445899999999999999999999 678999999999999999999999
Q ss_pred eeeccccccCCCCCceeeeccccCccccCCCccCCC-----CcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHH
Q 005040 570 SDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEG-----IVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWV 644 (717)
Q Consensus 570 ~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-----~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~ 644 (717)
+|||++........ ......++..|+|||++... .++.++|||||||++|||++|+.||...... ....++.
T Consensus 170 ~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~-~~~~~~~ 246 (291)
T cd06639 170 VDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV-KTLFKIP 246 (291)
T ss_pred eecccchhcccccc--cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH-HHHHHHh
Confidence 99999886543221 11234578899999986543 3688999999999999999999998753221 1111111
Q ss_pred HhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 645 KESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
... + ... .........+.+++.+||+.+|++||++.|+++
T Consensus 247 ~~~-~---~~~------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 247 RNP-P---PTL------------LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred cCC-C---CCC------------CcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 100 0 000 011123345889999999999999999999986
No 285
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=3e-35 Score=301.89 Aligned_cols=257 Identities=23% Similarity=0.306 Sum_probs=200.5
Q ss_pred HHHHHHHhccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhc-CCCceeeEeeeeec--
Q 005040 419 YLDIRRATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNV-RHRNLLKILGSCSN-- 494 (717)
Q Consensus 419 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~-- 494 (717)
..++....+.|++.+.||+|+||.||+|... +++.||+|++..... ....+..|+.+++++ +||||+++++++..
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~ 86 (282)
T cd06636 8 LSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTED-EEEEIKLEINMLKKYSHHRNIATYYGAFIKKS 86 (282)
T ss_pred hhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChH-HHHHHHHHHHHHHHhcCCCcEEEEeeehhccc
Confidence 3445556789999999999999999999974 788999999865533 335678899999998 69999999999843
Q ss_pred ----CCeeEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEE
Q 005040 495 ----LDFKALVLEFMPNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHV 569 (717)
Q Consensus 495 ----~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl 569 (717)
....++||||+++|+|.+++... ...+++..+..++.|++.|++||| +.+++|+|++|+||+++.++.++|
T Consensus 87 ~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH----~~~ivH~dl~~~nili~~~~~~~l 162 (282)
T cd06636 87 PPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLH----AHKVIHRDIKGQNVLLTENAEVKL 162 (282)
T ss_pred ccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEE
Confidence 45789999999999999999754 344788889999999999999999 678999999999999999999999
Q ss_pred eeeccccccCCCCCceeeeccccCccccCCCccC-----CCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHH
Q 005040 570 SDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGS-----EGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWV 644 (717)
Q Consensus 570 ~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~-----~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~ 644 (717)
+|||++........ ......++..|+|||.+. ...++.++|||||||++|||++|+.||....+.. ...
T Consensus 163 ~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~----~~~ 236 (282)
T cd06636 163 VDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMR----ALF 236 (282)
T ss_pred eeCcchhhhhcccc--CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHh----hhh
Confidence 99999876532211 123345888999999865 3568889999999999999999999986532111 000
Q ss_pred HhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 645 KESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.. ....... .....++.++.+++.+||+.||.+||++.|+++
T Consensus 237 ~~------~~~~~~~--------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 237 LI------PRNPPPK--------LKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred hH------hhCCCCC--------CcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 00 0000000 011134567899999999999999999999875
No 286
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=8.6e-35 Score=299.16 Aligned_cols=255 Identities=25% Similarity=0.288 Sum_probs=200.2
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeec--CCeeEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSN--LDFKALVL 502 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~--~~~~~lv~ 502 (717)
++|+..+.||.|++|.||+|... +++.+|+|.+.... ......+.+|++++++++||||+++++++.+ ....++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 36788899999999999999975 68899999987543 2345678889999999999999999998854 34689999
Q ss_pred EccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccC
Q 005040 503 EFMPNGSLEKWLYS---HNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLG 579 (717)
Q Consensus 503 e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 579 (717)
||+++++|.+++.. ....+++..+..++.|+++||.||| +.+++|+||+|+||+++.++.++|+|||++....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH----~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~ 156 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH----SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELV 156 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEEecCCeEEEeecccccccc
Confidence 99999999988763 3445788999999999999999999 6789999999999999999999999999987653
Q ss_pred CCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCcccc---CcchHHHHHHhhCCCchhhhc
Q 005040 580 EGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFT---GEMSLRRWVKESLPHRLTEVV 656 (717)
Q Consensus 580 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 656 (717)
.... ....++..|+|||...+..++.++||||+|+++|||++|+.||..... .......+............
T Consensus 157 ~~~~----~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 231 (287)
T cd06621 157 NSLA----GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDE- 231 (287)
T ss_pred cccc----ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccC-
Confidence 2211 233568889999999988999999999999999999999999976421 11122222221110000000
Q ss_pred cccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 657 DANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.......+..+.+++.+||+.+|++|||+.|+++
T Consensus 232 ----------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 232 ----------PGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred ----------CCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 0101123456889999999999999999999987
No 287
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=6.3e-35 Score=303.23 Aligned_cols=246 Identities=26% Similarity=0.311 Sum_probs=197.8
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
..|+..+.||+|+||.||+|... +++.||+|.+.... .+..+.+.+|+++++.++||||+++.+++.+.+..++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 56888899999999999999875 78999999886432 334467889999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
||++ |++.+++......+++..+..++.|++.||.||| +.+|+||||+|+||+++.++.++|+|||++......
T Consensus 95 e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH----~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~- 168 (307)
T cd06607 95 EYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLH----SHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA- 168 (307)
T ss_pred HhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHH----HCCceecCCCcccEEECCCCCEEEeecCcceecCCC-
Confidence 9996 6888888765556899999999999999999999 678999999999999999999999999998765322
Q ss_pred CceeeeccccCccccCCCccC---CCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhcccc
Q 005040 583 DSVIQTMTMATIGYMAPEYGS---EGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDAN 659 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~---~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (717)
....++..|+|||++. ...++.++||||||+++|||++|+.||....... .........+ +.
T Consensus 169 -----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~--~~~~~~~~~~--------~~ 233 (307)
T cd06607 169 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--ALYHIAQNDS--------PT 233 (307)
T ss_pred -----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH--HHHHHhcCCC--------CC
Confidence 2235788899999763 4668899999999999999999999986532111 0111110000 00
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 660 LVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 660 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
.....++.++.+++.+||+.+|++||++.+++..
T Consensus 234 --------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 234 --------LSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred --------CCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0011345668999999999999999999999873
No 288
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.6e-35 Score=304.72 Aligned_cols=266 Identities=25% Similarity=0.300 Sum_probs=200.0
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLE 503 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 503 (717)
++|+..+.||+|+||.||+|..+ +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 36888999999999999999976 68999999886543 2234567889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 504 FMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 504 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
|+++++|..+..... .+++..+..++.|+++|+.||| +.+++|+|++|+||++++++.++|+|||++........
T Consensus 81 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH----~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07846 81 FVDHTVLDDLEKYPN-GLDESRVRKYLFQILRGIEFCH----SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 155 (286)
T ss_pred cCCccHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH----HCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc
Confidence 999988888766543 3899999999999999999999 67899999999999999999999999999886543321
Q ss_pred ceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHH--hhCCCchhhhccc--
Q 005040 584 SVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVK--ESLPHRLTEVVDA-- 658 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-- 658 (717)
......++..|+|||+..+ ..++.++||||||+++|||++|+.||...... ....+... ...........+.
T Consensus 156 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07846 156 --VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDI-DQLYHIIKCLGNLIPRHQEIFQKNP 232 (286)
T ss_pred --ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchH-HHHHHHHHHhCCCchhhHHHhccch
Confidence 1223457889999998765 45788999999999999999999998643211 11111000 0011111111110
Q ss_pred --------cchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 659 --------NLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 659 --------~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
..............++..+.+++.+||+.+|++||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 233 LFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred HhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 000000000011234567899999999999999999999875
No 289
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=5.8e-35 Score=296.76 Aligned_cols=252 Identities=27% Similarity=0.385 Sum_probs=202.6
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhhH--HHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLE--RAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
+|+..+.||+|+||.||+|... +++.||+|.++.... ...+.+..|+++++.++|+||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 4788899999999999999865 789999999875543 3567889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
+++++|.+++.... .+++..+..++.|+++|+.||| +.+++|+||+|+||++++++.+||+|||++.........
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lh----~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 81 CSGGTLEELLEHGR-ILDEHVIRVYTLQLLEGLAYLH----SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred CCCCcHHHHHhhcC-CCChHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCc
Confidence 99999999998754 3788999999999999999999 678999999999999999999999999999876543322
Q ss_pred ee--eeccccCccccCCCccCCCC---cCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhcccc
Q 005040 585 VI--QTMTMATIGYMAPEYGSEGI---VSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDAN 659 (717)
Q Consensus 585 ~~--~~~~~~t~~y~aPE~~~~~~---~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (717)
.. .....++..|+|||++.+.. ++.++||||||+++||+++|+.||...... ......+.....
T Consensus 156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~---------- 224 (264)
T cd06626 156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE-FQIMFHVGAGHK---------- 224 (264)
T ss_pred ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch-HHHHHHHhcCCC----------
Confidence 11 11345788999999987766 899999999999999999999999653211 111111111000
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 660 LVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 660 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
...+....++..+.+++.+||+.+|.+||++.|++.
T Consensus 225 -----~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 225 -----PPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred -----CCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 011111223556789999999999999999999864
No 290
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1e-34 Score=293.47 Aligned_cols=247 Identities=25% Similarity=0.364 Sum_probs=200.0
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
+|+..+.||+|+||.||+|... +++.+|+|.+.... ......+.+|+++++.++|||++++++.+...+..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 4788899999999999999864 78899999886542 33456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCC-CcEEEeeeccccccCCCC
Q 005040 505 MPNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDEN-MVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 505 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfgl~~~~~~~~ 582 (717)
+++++|.+++... ...+++..+..++.++++|++||| +.+++|+||+|+||+++.+ +.+|++|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh----~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVH----TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc
Confidence 9999999999864 345899999999999999999999 6799999999999999854 468999999998764332
Q ss_pred CceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchh
Q 005040 583 DSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVR 662 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (717)
. .....++..|+|||...+..++.++||||||+++|+|++|+.||...... .....+.......
T Consensus 157 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~----------- 220 (256)
T cd08220 157 K---AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP--ALVLKIMSGTFAP----------- 220 (256)
T ss_pred c---ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH--HHHHHHHhcCCCC-----------
Confidence 1 12345788999999999888999999999999999999999998653211 1111111000000
Q ss_pred hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 663 EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 663 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
....++.++.+++.+||+.+|++|||+.|+++
T Consensus 221 ------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 221 ------ISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred ------CCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 01123456889999999999999999999986
No 291
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=6.7e-35 Score=304.79 Aligned_cols=193 Identities=22% Similarity=0.289 Sum_probs=158.4
Q ss_pred ccccccccEEEEEEEec---CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeee--cCCeeEEEEEccCC
Q 005040 433 NLLGTGGFGSVYKGTLS---DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCS--NLDFKALVLEFMPN 507 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~--~~~~~~lv~e~~~~ 507 (717)
.+||+|+||.||+|..+ ++..||+|.+.... ....+.+|++++++++||||+++++++. .....++||||++
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~- 83 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE- 83 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-
Confidence 57999999999999864 45789999886442 2245678999999999999999999884 3567799999986
Q ss_pred CCHHHHHhhC--------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeee----CCCCcEEEeeeccc
Q 005040 508 GSLEKWLYSH--------NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILL----DENMVAHVSDFGIS 575 (717)
Q Consensus 508 g~L~~~l~~~--------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfgl~ 575 (717)
++|.+++... ...+++..+..++.|++.||.||| +.+|+||||||+||++ +.++.+||+|||++
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH----~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH----ANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH----hCCEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 5888887522 234788999999999999999999 6889999999999999 56779999999999
Q ss_pred cccCCCCCc-eeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCc
Q 005040 576 KLLGEGEDS-VIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDE 632 (717)
Q Consensus 576 ~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~ 632 (717)
+........ .......+|+.|+|||++.+ ..++.++|||||||++|||+||+.||..
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 876433221 11233467999999998866 4589999999999999999999999965
No 292
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=4.9e-35 Score=300.49 Aligned_cols=248 Identities=23% Similarity=0.313 Sum_probs=199.3
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccC
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMP 506 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 506 (717)
.|...+.||+|++|.||+|... +++.+|+|++........+.+.+|+.+++.++||||+++++++...+..++|+||++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 4555679999999999999864 788999998875544445668899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCcee
Q 005040 507 NGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVI 586 (717)
Q Consensus 507 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~ 586 (717)
+++|.+++.. ..+++..+..++.|++.|++||| +.+++||||+|+||+++.++.++|+|||.+........ .
T Consensus 100 ~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~--~ 171 (285)
T cd06648 100 GGALTDIVTH--TRMNEEQIATVCLAVLKALSFLH----AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP--R 171 (285)
T ss_pred CCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCc--c
Confidence 9999999987 34889999999999999999999 67899999999999999999999999998875533211 1
Q ss_pred eeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhh
Q 005040 587 QTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQA 666 (717)
Q Consensus 587 ~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (717)
.....|++.|+|||...+..++.++||||||+++|||++|+.||..... ...........+.. .
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~--~~~~~~~~~~~~~~--------~------ 235 (285)
T cd06648 172 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP--LQAMKRIRDNLPPK--------L------ 235 (285)
T ss_pred cccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH--HHHHHHHHhcCCCC--------C------
Confidence 2234588999999999888899999999999999999999999864211 11111111110000 0
Q ss_pred hhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 667 FSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 667 ~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.....++..+.+++.+||+.+|++||++.++++
T Consensus 236 -~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 236 -KNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred -cccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 011123456889999999999999999999985
No 293
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=3.7e-35 Score=301.65 Aligned_cols=265 Identities=25% Similarity=0.319 Sum_probs=197.4
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
+|+..+.||+|++|.||+|+.. +++.||+|.+.... ......+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4788899999999999999875 78999999886443 22335688899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 505 MPNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 505 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
+. ++|.+++... ...+++..+..++.|++.||+||| +.+++||||+|+||+++.++.+||+|||++........
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh----~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~ 155 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCH----SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 155 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc
Confidence 95 6899988753 345899999999999999999999 67899999999999999999999999999876543221
Q ss_pred ceeeeccccCccccCCCccCCC-CcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhC-CCc-h----hhhc
Q 005040 584 SVIQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESL-PHR-L----TEVV 656 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~-~----~~~~ 656 (717)
. .....++..|+|||+..+. .++.++||||||+++|||+||+.||...... ....+...... +.. . ....
T Consensus 156 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07860 156 T--YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSLP 232 (284)
T ss_pred c--cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHhCCCChhhhhhhhHHH
Confidence 1 2233568899999977654 4688999999999999999999998653211 11122111111 000 0 0000
Q ss_pred c--ccchhhhh-hh-hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 657 D--ANLVREEQ-AF-SDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 657 ~--~~~~~~~~-~~-~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
. ..+..... .. ......+.++.+++.+|++.||++|||++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 233 DYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 0 00000000 00 001123456789999999999999999999875
No 294
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=6.5e-35 Score=300.04 Aligned_cols=252 Identities=25% Similarity=0.324 Sum_probs=205.2
Q ss_pred HhccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEE
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLE 503 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 503 (717)
.++.|+..+.||+|+||.||+|..+ +++.||+|++..... ..+.+.+|+++++.++|+|++++++++......++|+|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence 4467888899999999999999986 789999999976544 45678889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 504 FMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 504 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
|+++++|.+++......+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++........
T Consensus 96 ~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH----~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 171 (286)
T cd06614 96 YMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLH----SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS 171 (286)
T ss_pred ccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH----hCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh
Confidence 99999999999986546899999999999999999999 68999999999999999999999999999876543221
Q ss_pred ceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhh
Q 005040 584 SVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVRE 663 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (717)
......++..|+|||+..+..++.++||||||+++|+|++|+.||...... .....+.....
T Consensus 172 --~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~-~~~~~~~~~~~--------------- 233 (286)
T cd06614 172 --KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL-RALFLITTKGI--------------- 233 (286)
T ss_pred --hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhcCC---------------
Confidence 112334788999999988888999999999999999999999998653211 11111111000
Q ss_pred hhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 664 EQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 664 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
........++..+.+++.+|++.+|.+||++.++++
T Consensus 234 -~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 234 -PPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred -CCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 001111224566889999999999999999999986
No 295
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=5.7e-35 Score=301.01 Aligned_cols=244 Identities=26% Similarity=0.306 Sum_probs=199.3
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
++|+..+.||+|+||.||++... +++.||+|++.... ......+.+|++++++++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36888899999999999999975 68999999987543 234467888999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
||+++++|.+++.... .+++..+..++.|++.||.||| +.+++||||+|+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qil~~l~~lH----~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~- 154 (290)
T cd05580 81 EYVPGGELFSHLRKSG-RFPEPVARFYAAQVVLALEYLH----SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR- 154 (290)
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC-
Confidence 9999999999998764 4899999999999999999999 678999999999999999999999999998876433
Q ss_pred CceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchh
Q 005040 583 DSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVR 662 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (717)
.....+++.|+|||...+..++.++||||||+++|+|++|+.||..... ....+.+. ....
T Consensus 155 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~-----------~~~~-- 215 (290)
T cd05580 155 ----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP--IQIYEKIL-----------EGKV-- 215 (290)
T ss_pred ----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHh-----------cCCc--
Confidence 2234688999999998888899999999999999999999999865321 11111110 0000
Q ss_pred hhhhhhhhHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 005040 663 EEQAFSDKMDCLFSIMDLALDCCMDTPHKRI-----HMTDAAA 700 (717)
Q Consensus 663 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~ev~~ 700 (717)
..+...+..+.+++.+||..+|.+|+ +++|+++
T Consensus 216 -----~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 216 -----RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred -----cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 00012235678999999999999999 6666653
No 296
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1e-34 Score=294.89 Aligned_cols=251 Identities=25% Similarity=0.322 Sum_probs=206.0
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhhH-HHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLE-RAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
++|++.+.||+|++|.||+|... +++.||+|++..... ...+.+.+|++.+++++|||++++++++......++||||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 36888899999999999999976 599999999876543 4457789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-CCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSS-APIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
+++++|.+++... ..+++..+..++.|+++|++||| + .+++||||+|+||+++.++.++|+|||.+........
T Consensus 81 ~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh----~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~ 155 (264)
T cd06623 81 MDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLH----TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD 155 (264)
T ss_pred cCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHh----ccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCC
Confidence 9999999999865 44899999999999999999999 6 8999999999999999999999999999987643322
Q ss_pred ceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCcccc-CcchHHHHHHhhCCCchhhhccccchh
Q 005040 584 SVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFT-GEMSLRRWVKESLPHRLTEVVDANLVR 662 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (717)
. .....++..|+|||...+..++.++|+||||+++|||++|+.||..... .......++... .. +
T Consensus 156 ~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~---~~-----~---- 221 (264)
T cd06623 156 Q--CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDG---PP-----P---- 221 (264)
T ss_pred c--ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcC---CC-----C----
Confidence 2 1234578899999999988999999999999999999999999976432 111111111110 00 0
Q ss_pred hhhhhhhhHH-HHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 663 EEQAFSDKMD-CLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 663 ~~~~~~~~~~-~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
..... ++..+.+++.+|++.+|++||++.|+++.
T Consensus 222 -----~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 222 -----SLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred -----CCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 00112 45678899999999999999999999874
No 297
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1e-34 Score=295.62 Aligned_cols=253 Identities=25% Similarity=0.356 Sum_probs=200.0
Q ss_pred cCCccccccccccEEEEEEEe-cCCCeEEEEEechhh------HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEE
Q 005040 428 EFNECNLLGTGGFGSVYKGTL-SDGTNVAIKIFNLQL------ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKAL 500 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~l 500 (717)
+|+..+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477788999999999999986 478999999986432 2235678899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC-cEEEeeeccccccC
Q 005040 501 VLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENM-VAHVSDFGISKLLG 579 (717)
Q Consensus 501 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfgl~~~~~ 579 (717)
||||+++++|.+++.+.. .+++..+..++.|++.||.||| +.+++|+||+|+||+++.++ .++|+|||.+..+.
T Consensus 81 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~al~~LH----~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~ 155 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG-AFKEAVIINYTEQLLRGLSYLH----ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLA 155 (268)
T ss_pred EEeccCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence 999999999999998654 4789999999999999999999 67999999999999998776 59999999998765
Q ss_pred CCCCc--eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhcc
Q 005040 580 EGEDS--VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVD 657 (717)
Q Consensus 580 ~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (717)
..... .......++..|+|||+..+..++.++||||+|+++|+|++|+.||....... .... ........ ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-~~~~-~~~~~~~~----~~ 229 (268)
T cd06630 156 AKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSN-HLAL-IFKIASAT----TA 229 (268)
T ss_pred cccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcc-hHHH-HHHHhccC----CC
Confidence 33211 11123357889999999988889999999999999999999999986422111 1111 11000000 00
Q ss_pred ccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 658 ANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
+ ..+...+.++.+++.+|+..+|++||++.|+++
T Consensus 230 ~---------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 230 P---------SIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred C---------CCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 0 011134466889999999999999999999875
No 298
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=8.3e-35 Score=293.34 Aligned_cols=249 Identities=29% Similarity=0.388 Sum_probs=204.7
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccC
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMP 506 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 506 (717)
+|+..+.||+|++|.||++... +++.+++|++..........+.+|++++++++||+++++++++......++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 4778899999999999999976 789999999976655456788999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCcee
Q 005040 507 NGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVI 586 (717)
Q Consensus 507 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~ 586 (717)
+++|.+++......+++..+..++.|+++|+.||| ..+++||||+|+||+++.++.++|+|||.+........
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh----~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--- 153 (253)
T cd05122 81 GGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLH----SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--- 153 (253)
T ss_pred CCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhh----cCCEecCCCCHHHEEEccCCeEEEeecccccccccccc---
Confidence 99999999876556899999999999999999999 68899999999999999999999999999987654332
Q ss_pred eeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhh
Q 005040 587 QTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQA 666 (717)
Q Consensus 587 ~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (717)
.....++..|+|||+..+..++.++||||||+++|+|++|+.||....... ....... .... .
T Consensus 154 ~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~---~~~~------------~ 216 (253)
T cd05122 154 RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMK--ALFKIAT---NGPP------------G 216 (253)
T ss_pred ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHH--HHHHHHh---cCCC------------C
Confidence 233457889999999888889999999999999999999999986531110 0000000 0000 0
Q ss_pred hhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 667 FSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 667 ~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
......++..+.+++.+|++.||++|||+.|+++
T Consensus 217 ~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 217 LRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred cCcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0111123456889999999999999999999875
No 299
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=8.4e-35 Score=295.73 Aligned_cols=250 Identities=24% Similarity=0.280 Sum_probs=195.4
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh-----HHHHHHHHHHHHHHHhcCCCceeeEeeeeecC--Cee
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-----ERAFRSFDSECEILRNVRHRNLLKILGSCSNL--DFK 498 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~--~~~ 498 (717)
.+|++.+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 47888999999999999999875 68999999875321 23456788899999999999999999988663 467
Q ss_pred EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeecccccc
Q 005040 499 ALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLL 578 (717)
Q Consensus 499 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 578 (717)
++||||+++++|.+++.... .+++..+..++.|++.||.||| +.+++|+||||+||+++.++.++|+|||++...
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH----~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~ 156 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG-ALTENVTRKYTRQILEGVSYLH----SNMIVHRDIKGANILRDSVGNVKLGDFGASKRL 156 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----hCCEecCCCCHHHEEecCCCCEEECcCcccccc
Confidence 89999999999999998654 3788889999999999999999 678999999999999999999999999998765
Q ss_pred CCCCCc-eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhcc
Q 005040 579 GEGEDS-VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVD 657 (717)
Q Consensus 579 ~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (717)
...... .......++..|+|||+..+..++.++||||||+++|||++|+.||...... ....+ .... . ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-~~~~~---~~~~-~----~~ 227 (265)
T cd06652 157 QTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM-AAIFK---IATQ-P----TN 227 (265)
T ss_pred ccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH-HHHHH---HhcC-C----CC
Confidence 322111 1112335788999999988888999999999999999999999998653111 11111 0000 0 00
Q ss_pred ccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 658 ANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
+. .+......+.+++.+|+. +|++||+++|+++
T Consensus 228 ~~---------~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 228 PV---------LPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred CC---------CchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 00 011234557789999995 9999999999875
No 300
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.3e-34 Score=294.27 Aligned_cols=253 Identities=23% Similarity=0.322 Sum_probs=200.7
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeec--CCeeEEEE
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSN--LDFKALVL 502 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~--~~~~~lv~ 502 (717)
+|++.+.||.|+||.||+|... +++.||+|++.... ....+.+..|++++++++||||+++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4788899999999999999864 78899999886432 3345678889999999999999999997753 45679999
Q ss_pred EccCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHhhcC-CCCCeEecCCCCCCeeeCCCCcEEEeeecccccc
Q 005040 503 EFMPNGSLEKWLYSH---NYFLDILQRLNIMIDVGSALEYLHHCH-SSAPIIHCDLKPTNILLDENMVAHVSDFGISKLL 578 (717)
Q Consensus 503 e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~-~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 578 (717)
||+++++|.+++... ...+++..++.++.|++.||.|||..+ .+.+++|+||+|+||+++.++.+||+|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999999999999753 456899999999999999999999321 1357999999999999999999999999999876
Q ss_pred CCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccc
Q 005040 579 GEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDA 658 (717)
Q Consensus 579 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (717)
...... .....+++.|+|||+..+..++.++|+||||+++|+|++|+.||.... .....+.+..... +
T Consensus 161 ~~~~~~--~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~--------~ 228 (265)
T cd08217 161 GHDSSF--AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN--QLQLASKIKEGKF--------R 228 (265)
T ss_pred cCCccc--ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC--HHHHHHHHhcCCC--------C
Confidence 543221 223457899999999998889999999999999999999999997532 1111111111000 0
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 659 NLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
. .....+.++.+++.+|++.+|++||++.++++.
T Consensus 229 ~---------~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 229 R---------IPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred C---------CccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 0 011334568899999999999999999999863
No 301
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=6.4e-35 Score=300.58 Aligned_cols=266 Identities=23% Similarity=0.269 Sum_probs=200.8
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLE 503 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 503 (717)
++|+..+.||+|+||.||+|..+ +++.||+|+++... ......+.+|++++++++||||+++++++.+.+..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36888999999999999999976 68899999886543 2334678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 504 FMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 504 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
|++++.+..+... ...+++..+..++.|++.|+.||| ..+++|+|++|+||++++++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH----~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 81 YVERTLLELLEAS-PGGLPPDAVRSYIWQLLQAIAYCH----SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred cCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence 9988666655544 344899999999999999999999 67899999999999999999999999999987654332
Q ss_pred ceeeeccccCccccCCCccCCC-CcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhh---CCCchhhhc--c
Q 005040 584 SVIQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKES---LPHRLTEVV--D 657 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~ 657 (717)
.......++..|+|||+..+. .++.++||||||+++|||++|+.||...... ......... .+....... +
T Consensus 156 -~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07833 156 -SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDI--DQLYLIQKCLGPLPPSHQELFSSN 232 (288)
T ss_pred -ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCCHHHhhhcccC
Confidence 122334578889999998887 8899999999999999999999998753221 111111100 000000000 0
Q ss_pred ccchh-----hh----hhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 658 ANLVR-----EE----QAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 658 ~~~~~-----~~----~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
..... .. ........++.++.++|++||..+|++||+++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 233 PRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred ccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 00000 00 000001123677999999999999999999999875
No 302
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2.1e-34 Score=294.66 Aligned_cols=248 Identities=25% Similarity=0.350 Sum_probs=200.6
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
+-|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+....++||||
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence 34677889999999999999864 78899999886443 33446788899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
+++++|.+++... .+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++|+|||++........
T Consensus 84 ~~~~~l~~~i~~~--~~~~~~~~~~~~~l~~~l~~lh----~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~- 156 (277)
T cd06641 84 LGGGSALDLLEPG--PLDETQIATILREILKGLDYLH----SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI- 156 (277)
T ss_pred CCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHc----cCCeecCCCCHHhEEECCCCCEEEeecccceecccchh-
Confidence 9999999998754 3789999999999999999999 68999999999999999999999999999876543221
Q ss_pred eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhh
Q 005040 585 VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREE 664 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (717)
......++..|+|||...+..++.++|+|||||++|||++|..||...... .....+...... .
T Consensus 157 -~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~--------~----- 220 (277)
T cd06641 157 -KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM--KVLFLIPKNNPP--------T----- 220 (277)
T ss_pred -hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH--HHHHHHhcCCCC--------C-----
Confidence 122345788999999998888999999999999999999999998653211 111111100000 0
Q ss_pred hhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 665 QAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 665 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
....++.++.+++.+|++.+|.+||++.++++.
T Consensus 221 ----~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 221 ----LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred ----CCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 011234567899999999999999999999984
No 303
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-36 Score=296.91 Aligned_cols=246 Identities=27% Similarity=0.349 Sum_probs=204.0
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
+.|+.-++||+|+||.||-++.+ +|+-+|.|.+.+.. ++...-...|..+|++++.+.||.+-..|+..+.+++|+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL 264 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence 56778889999999999999865 79999999886553 233345678999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCC
Q 005040 503 EFMPNGSLEKWLYSHN-YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEG 581 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 581 (717)
..|.||||.-+|.+.+ ..++++.+.-++.+|+.||.+|| ..+||+||+||+|||+|+.|+++|+|.|+|..+..+
T Consensus 265 tlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH----~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g 340 (591)
T KOG0986|consen 265 TLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLH----RRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEG 340 (591)
T ss_pred EeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHH----hcceeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence 9999999998887653 45899999999999999999999 678999999999999999999999999999988655
Q ss_pred CCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccch
Q 005040 582 EDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLV 661 (717)
Q Consensus 582 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (717)
.. ....+||.||||||++.++.|+...|+||+||++|||+.|+.||....... -.+-+|.+..
T Consensus 341 ~~---~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKv--------------k~eEvdrr~~ 403 (591)
T KOG0986|consen 341 KP---IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKV--------------KREEVDRRTL 403 (591)
T ss_pred Cc---cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhh--------------hHHHHHHHHh
Confidence 43 234589999999999999999999999999999999999999996532211 1122333333
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCH
Q 005040 662 REEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHM 695 (717)
Q Consensus 662 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~ 695 (717)
.....++ ..+++++.++.+..|..||++|...
T Consensus 404 ~~~~ey~--~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 404 EDPEEYS--DKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred cchhhcc--cccCHHHHHHHHHHHccCHHHhccC
Confidence 3322222 4667888999999999999999843
No 304
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1e-35 Score=281.52 Aligned_cols=270 Identities=21% Similarity=0.329 Sum_probs=209.8
Q ss_pred CHHHHHHHhccCCccccccccccEEEEEEE-ecCCCeEEEEEechhhHHHHHHHHHHHHHHHhcC-CCceeeEeeeeecC
Q 005040 418 SYLDIRRATDEFNECNLLGTGGFGSVYKGT-LSDGTNVAIKIFNLQLERAFRSFDSECEILRNVR-HRNLLKILGSCSNL 495 (717)
Q Consensus 418 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-hpniv~~~~~~~~~ 495 (717)
+|.+..+-++ +.||+|+|+.|-.+. ..+|.++|||++.+.....+.++.+|++++.+.+ |+||++++++|+++
T Consensus 74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd 148 (463)
T KOG0607|consen 74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD 148 (463)
T ss_pred hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence 4666666655 479999999999887 5689999999999887777888999999999995 99999999999999
Q ss_pred CeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC---cEEEeee
Q 005040 496 DFKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENM---VAHVSDF 572 (717)
Q Consensus 496 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~---~~kl~Df 572 (717)
...|+|||-|.||+|..++++... +.+..+.+++++|+.||.||| .++|.|||+||+|||-.+.. -|||+||
T Consensus 149 ~~FYLVfEKm~GGplLshI~~~~~-F~E~EAs~vvkdia~aLdFlH----~kgIAHRDlKPENiLC~~pn~vsPvKiCDf 223 (463)
T KOG0607|consen 149 TRFYLVFEKMRGGPLLSHIQKRKH-FNEREASRVVKDIASALDFLH----TKGIAHRDLKPENILCESPNKVSPVKICDF 223 (463)
T ss_pred ceEEEEEecccCchHHHHHHHhhh-ccHHHHHHHHHHHHHHHHHHh----hcCcccccCCccceeecCCCCcCceeeecc
Confidence 999999999999999999998765 889999999999999999999 78999999999999997544 4899999
Q ss_pred ccccccCCCC-----CceeeeccccCccccCCCc-----cCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHH
Q 005040 573 GISKLLGEGE-----DSVIQTMTMATIGYMAPEY-----GSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRR 642 (717)
Q Consensus 573 gl~~~~~~~~-----~~~~~~~~~~t~~y~aPE~-----~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~ 642 (717)
.+..-+.... .+..-...+|+..|||||+ -....|+.++|.||+|||+|=|++|.+||.++...+ --
T Consensus 224 DLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~d---CG 300 (463)
T KOG0607|consen 224 DLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGAD---CG 300 (463)
T ss_pred ccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCc---CC
Confidence 8875432111 1222334578899999994 334568999999999999999999999998865421 11
Q ss_pred HHHhhCCCchhhhccccchhhhhhhh--hhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 643 WVKESLPHRLTEVVDANLVREEQAFS--DKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
|-....-+...+.+-..+.+....++ ++...+.+..+++...+..|+.+|.++.+++.
T Consensus 301 WdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 301 WDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred ccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 21111111111222222222222222 23466778899999999999999999998876
No 305
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=8.1e-35 Score=300.49 Aligned_cols=265 Identities=24% Similarity=0.260 Sum_probs=198.9
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhhH--HHHHHHHHHHHHHHhcCCCceeeEeeeeecC--CeeEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLE--RAFRSFDSECEILRNVRHRNLLKILGSCSNL--DFKALV 501 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~--~~~~lv 501 (717)
++|+..+.||+|+||.||+|..+ +++.+|+|.++.... .....+.+|+.++++++||||+++++++... ...|+|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 57889999999999999999976 688999999865432 2223567899999999999999999998776 889999
Q ss_pred EEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCC
Q 005040 502 LEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEG 581 (717)
Q Consensus 502 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 581 (717)
|||++ ++|.+++......+++..+..++.|++.||+||| +.+++|+||||+||+++.++.++|+|||++......
T Consensus 85 ~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 159 (293)
T cd07843 85 MEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLH----DNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSP 159 (293)
T ss_pred ehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH----HCCeeeccCCHHHEEECCCCcEEEeecCceeeccCC
Confidence 99997 5999999876666899999999999999999999 678999999999999999999999999999876543
Q ss_pred CCceeeeccccCccccCCCccCCC-CcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhC-CC--chhhh--
Q 005040 582 EDSVIQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESL-PH--RLTEV-- 655 (717)
Q Consensus 582 ~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~--~~~~~-- 655 (717)
.. ......+++.|+|||...+. .++.++|+||+|+++|||++|+.||...... ........... +. .+...
T Consensus 160 ~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 236 (293)
T cd07843 160 LK--PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEI-DQLNKIFKLLGTPTEKIWPGFSE 236 (293)
T ss_pred cc--ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCchHHHHHhhc
Confidence 21 12334578889999987654 4689999999999999999999998753211 11111110000 00 00000
Q ss_pred ---------ccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 656 ---------VDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 656 ---------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
...........++.. ..+..+.+++.+||+.+|++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 237 LPGAKKKTFTKYPYNQLRKKFPAL-SLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred cchhcccccccccchhhhcccccc-CCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 000000000001110 13566889999999999999999999975
No 306
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.4e-34 Score=297.01 Aligned_cols=261 Identities=22% Similarity=0.245 Sum_probs=195.4
Q ss_pred CCccccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcC-CCceeeEeeeeecC--CeeEEEEE
Q 005040 429 FNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVR-HRNLLKILGSCSNL--DFKALVLE 503 (717)
Q Consensus 429 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-hpniv~~~~~~~~~--~~~~lv~e 503 (717)
|++.+.||+|+||.||+|... +++.||+|+++... ........+|+.+++++. |||++++++++.+. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 567889999999999999865 78999999987542 222233456888999885 99999999999887 88999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 504 FMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 504 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
|++ |++.+++......+++..+..++.|++.||+||| +.+++||||+|+||+++. +.+||+|||++........
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH----~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~ 154 (282)
T cd07831 81 LMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMH----RNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP 154 (282)
T ss_pred cCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH----HCCceecccCHHHEEEcC-CCeEEEecccccccccCCC
Confidence 996 5898888876566899999999999999999999 678999999999999999 9999999999987643222
Q ss_pred ceeeeccccCccccCCCcc-CCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhh---cc--
Q 005040 584 SVIQTMTMATIGYMAPEYG-SEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEV---VD-- 657 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~-~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-- 657 (717)
. ....++..|+|||+. .++.++.++||||+||++|||++|..||..... .....+..........++ ..
T Consensus 155 ~---~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (282)
T cd07831 155 Y---TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNE--LDQIAKIHDVLGTPDAEVLKKFRKS 229 (282)
T ss_pred c---CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCH--HHHHHHHHHHcCCCCHHHHHhhccc
Confidence 1 223578899999965 445678999999999999999999999965321 122222222111110000 00
Q ss_pred ----ccchhhhh--hhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 658 ----ANLVREEQ--AFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 658 ----~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
..+..... .......++.++.+++.+||+.+|++||+++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 230 RHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred ccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 00000000 00001234678999999999999999999999975
No 307
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=9.7e-35 Score=297.36 Aligned_cols=247 Identities=25% Similarity=0.379 Sum_probs=198.2
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcC---CCceeeEeeeeecCCeeEEEE
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVR---HRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~---hpniv~~~~~~~~~~~~~lv~ 502 (717)
.|+..+.||+|+||.||+|.+. +++.||+|.+.... ......+.+|+.+++.++ |||++++++++.+....++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 4777889999999999999964 78999999986542 334456788999999996 999999999999999999999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
||+++++|.++++.. .+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++|+|||++..+....
T Consensus 82 e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh----~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06917 82 EYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIH----KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS 155 (277)
T ss_pred ecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHH----hCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc
Confidence 999999999998764 4899999999999999999999 6789999999999999999999999999998765433
Q ss_pred CceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccch
Q 005040 583 DSVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLV 661 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (717)
. ......|+..|+|||...+ ..++.++|+||||+++|+|++|+.||...... .+........ .+.+.
T Consensus 156 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-----~~~~~~~~~~-----~~~~~ 223 (277)
T cd06917 156 S--KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF-----RAMMLIPKSK-----PPRLE 223 (277)
T ss_pred c--ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh-----hhhhccccCC-----CCCCC
Confidence 1 1233468889999998765 44689999999999999999999999753211 1111000000 00010
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 662 REEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 662 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
...++.++.+++.+||+.||++||++.|+++
T Consensus 224 --------~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 224 --------DNGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred --------cccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 0114456889999999999999999999976
No 308
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=6.6e-35 Score=295.26 Aligned_cols=247 Identities=28% Similarity=0.330 Sum_probs=201.3
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEE
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLE 503 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 503 (717)
+|++.+.||.|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+....++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4788899999999999999976 68999999997543 2345678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 504 FMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 504 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
|+.+++|.+++... ..+++..+..++.|+++||.||| +.+++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh----~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLH----SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT- 154 (258)
T ss_pred CCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc-
Confidence 99999999999876 45899999999999999999999 6789999999999999999999999999988764332
Q ss_pred ceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhh
Q 005040 584 SVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVRE 663 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (717)
......++..|+|||+..+..++.++|+||+|+++|+|++|+.||...... ...+........ . .
T Consensus 155 --~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~~~-~----~----- 219 (258)
T cd05578 155 --LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT---IRDQIRAKQETA-D----V----- 219 (258)
T ss_pred --cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc---HHHHHHHHhccc-c----c-----
Confidence 123345788999999988888999999999999999999999999753221 111111111100 0 0
Q ss_pred hhhhhhhHHHHHHHHHHHhhccCCCCCCCCCH--HHHH
Q 005040 664 EQAFSDKMDCLFSIMDLALDCCMDTPHKRIHM--TDAA 699 (717)
Q Consensus 664 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~--~ev~ 699 (717)
..+...+.++.+++.+||+.||.+||++ +|++
T Consensus 220 ----~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 220 ----LYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred ----cCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 0111234668899999999999999999 6554
No 309
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=6.9e-35 Score=304.41 Aligned_cols=252 Identities=27% Similarity=0.346 Sum_probs=200.7
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
++|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+..|+++++.++||||+++++.+.+....++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888899999999999999976 58999999987543 224567888999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCC
Q 005040 503 EFMPNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEG 581 (717)
Q Consensus 503 e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 581 (717)
||+.+++|.+++... ...+++..+..++.|+++||+||| +.+++|+||||+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 156 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLH----LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVE 156 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHH----HCCeeccCCChHHeEEcCCCCEEEeecchhhccccc
Confidence 999999999999854 355899999999999999999999 678999999999999999999999999998765322
Q ss_pred CCce---------------------------eeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccc
Q 005040 582 EDSV---------------------------IQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMF 634 (717)
Q Consensus 582 ~~~~---------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~ 634 (717)
.... ......|+..|+|||+..+..++.++||||||+++|+|++|+.||....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 1100 0112357889999999988889999999999999999999999996532
Q ss_pred cCcchHHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCC----HHHHHH
Q 005040 635 TGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIH----MTDAAA 700 (717)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt----~~ev~~ 700 (717)
.. ..+.. +.+... ..+.....+.++.+++.+|+..||++||+ ++|+++
T Consensus 237 ~~----~~~~~---------~~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 237 RD----ETFSN---------ILKKEV-----TFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred hH----HHHHH---------HhcCCc-----cCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 21 11111 000000 01111124567899999999999999999 666555
No 310
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-35 Score=306.28 Aligned_cols=241 Identities=26% Similarity=0.427 Sum_probs=192.2
Q ss_pred ccccccccEEEEEEEec-CCCeEEE---EEechh-hHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCe--eEEEEEcc
Q 005040 433 NLLGTGGFGSVYKGTLS-DGTNVAI---KIFNLQ-LERAFRSFDSECEILRNVRHRNLLKILGSCSNLDF--KALVLEFM 505 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~-~~~~vav---K~~~~~-~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~--~~lv~e~~ 505 (717)
..||+|+|-+||+|.+. +|.+||= |.-+.. ..+..++|..|+++|+.|+|||||+++++|.+... ..+|+|.+
T Consensus 46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~ 125 (632)
T KOG0584|consen 46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELF 125 (632)
T ss_pred hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecc
Confidence 57999999999999975 6777753 322111 13445789999999999999999999999977655 67899999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeC-CCCcEEEeeeccccccCCCCCc
Q 005040 506 PNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLD-ENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 506 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
..|+|..|+++.+. .....+..|++||++||.|||.. .++|+|||||-+||+++ ..|.|||+|.|+|..+.....
T Consensus 126 TSGtLr~Y~kk~~~-vn~kaik~W~RQILkGL~yLHs~--~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~a- 201 (632)
T KOG0584|consen 126 TSGTLREYRKKHRR-VNIKAIKSWCRQILKGLVYLHSQ--DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHA- 201 (632)
T ss_pred cCCcHHHHHHHhcc-CCHHHHHHHHHHHHHHhhhhhcC--CCCccccccccceEEEcCCcCceeecchhHHHHhhcccc-
Confidence 99999999998765 88899999999999999999975 46899999999999998 678999999999998754322
Q ss_pred eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhh-CCCchhhhccccchhh
Q 005040 585 VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKES-LPHRLTEVVDANLVRE 663 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 663 (717)
....|||.|||||+.. ..|.+.+||||||+.++||.|+..||.. +....++.+-+..- .|..+..+-|
T Consensus 202 ---ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsE-C~n~AQIYKKV~SGiKP~sl~kV~d------ 270 (632)
T KOG0584|consen 202 ---KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSE-CTNPAQIYKKVTSGIKPAALSKVKD------ 270 (632)
T ss_pred ---ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhh-hCCHHHHHHHHHcCCCHHHhhccCC------
Confidence 2367999999999877 7899999999999999999999999975 22222222222211 1222222222
Q ss_pred hhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 664 EQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 664 ~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
+++.++|.+|+.. .++|||+.|+++
T Consensus 271 -----------Pevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 271 -----------PEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred -----------HHHHHHHHHHhcC-chhccCHHHHhh
Confidence 4577999999999 899999999875
No 311
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=2.9e-34 Score=299.40 Aligned_cols=247 Identities=26% Similarity=0.327 Sum_probs=198.1
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEE
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLE 503 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 503 (717)
.|+..+.||+|+||.||+|... ++..||+|.+.... .+....+.+|++++++++|||++++++++.+....++|||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 4677889999999999999965 78899999886432 3344678889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 504 FMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 504 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
|+. |++.+++......+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++|+|||++......
T Consensus 106 ~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH----~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~-- 178 (317)
T cd06635 106 YCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH----SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA-- 178 (317)
T ss_pred CCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCcccEEECCCCCEEEecCCCccccCCc--
Confidence 996 5888888766666899999999999999999999 678999999999999999999999999998754322
Q ss_pred ceeeeccccCccccCCCcc---CCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccc
Q 005040 584 SVIQTMTMATIGYMAPEYG---SEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANL 660 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~---~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (717)
....+++.|+|||++ ..+.++.++|||||||++|||++|+.||..... ......+.....+.
T Consensus 179 ----~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~-~~~~~~~~~~~~~~---------- 243 (317)
T cd06635 179 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-MSALYHIAQNESPT---------- 243 (317)
T ss_pred ----ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccH-HHHHHHHHhccCCC----------
Confidence 223578899999986 346789999999999999999999999865311 11111111111000
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 005040 661 VREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLR 703 (717)
Q Consensus 661 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~ 703 (717)
.....++..+.+++.+|++.+|.+||++.++++..-
T Consensus 244 -------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 279 (317)
T cd06635 244 -------LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMF 279 (317)
T ss_pred -------CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChh
Confidence 011133456889999999999999999999998654
No 312
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-35 Score=307.71 Aligned_cols=273 Identities=27% Similarity=0.331 Sum_probs=205.9
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCC------eeE
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNLD------FKA 499 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~------~~~ 499 (717)
-|...+.||+|+||.||+|+++ +|+.||||.+.... ....+...+|++++++++|||||+++++-++.. ...
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 3455678999999999999965 89999999997654 334566788999999999999999999865543 457
Q ss_pred EEEEccCCCCHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeC--CCC--cEEEeeec
Q 005040 500 LVLEFMPNGSLEKWLYS--HNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLD--ENM--VAHVSDFG 573 (717)
Q Consensus 500 lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~--~~~--~~kl~Dfg 573 (717)
+|||||.+|||...+++ +...+++.....+..+++.||.||| +++||||||||.||++- .+| ..||+|||
T Consensus 94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr----En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG 169 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR----ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFG 169 (732)
T ss_pred EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH----HcCceeccCCCCcEEEeecCCCceEEeeeccc
Confidence 99999999999999984 3456999999999999999999999 67999999999999985 333 47999999
Q ss_pred cccccCCCCCceeeeccccCccccCCCccC-CCCcCcccchhhHHHHHHHHHhCCCCCCccccCcc-hHHHHHHh-hCCC
Q 005040 574 ISKLLGEGEDSVIQTMTMATIGYMAPEYGS-EGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEM-SLRRWVKE-SLPH 650 (717)
Q Consensus 574 l~~~~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~-~~~~~~~~-~~~~ 650 (717)
.|+.+.++. .....+||..|++||+.. .+.|+..+|.|||||++||+.||..||........ .-..|..- .-+.
T Consensus 170 ~Arel~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~ 246 (732)
T KOG4250|consen 170 AARELDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPS 246 (732)
T ss_pred ccccCCCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCC
Confidence 999886544 456678999999999888 48899999999999999999999999976433321 11122211 1111
Q ss_pred chhhhccccchhhh-------hhhhhhHHHHHHHHHHHhhccCCCCCCCC--CHHHHHHHHHHhHH
Q 005040 651 RLTEVVDANLVREE-------QAFSDKMDCLFSIMDLALDCCMDTPHKRI--HMTDAAAKLRKIKA 707 (717)
Q Consensus 651 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~li~~cl~~~P~~Rp--t~~ev~~~L~~~~~ 707 (717)
.......+...+.. ............+..++..++..+|++|. .+.+..+.+..|.+
T Consensus 247 ~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~ 312 (732)
T KOG4250|consen 247 GVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILN 312 (732)
T ss_pred ceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHh
Confidence 21111111111100 00111112234466788899999999999 88888888877755
No 313
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=5.9e-36 Score=282.28 Aligned_cols=202 Identities=24% Similarity=0.323 Sum_probs=168.9
Q ss_pred hccCCccccccccccEEEEEEEec---C--CCeEEEEEechhhH--HHHHHHHHHHHHHHhcCCCceeeEeeeeec-CCe
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS---D--GTNVAIKIFNLQLE--RAFRSFDSECEILRNVRHRNLLKILGSCSN-LDF 497 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~---~--~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~hpniv~~~~~~~~-~~~ 497 (717)
..+|+.+..||+|.||.||+|..+ + ...+|+|.++..++ ......-+|+..++.++|||++.++.++-. +..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 368999999999999999999643 3 23689999876542 223456779999999999999999999876 778
Q ss_pred eEEEEEccCCCCHHHHHhhC----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCC----CcEEE
Q 005040 498 KALVLEFMPNGSLEKWLYSH----NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDEN----MVAHV 569 (717)
Q Consensus 498 ~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~----~~~kl 569 (717)
+++++||.+. ||++.++-+ ...++...+..|+.||+.|+.||| ++-|+||||||.||++..+ |.|||
T Consensus 103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH----~NWvlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH----SNWVLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh----hhheeeccCCcceEEEeccCCccCeeEe
Confidence 8999999987 999998732 356899999999999999999999 6679999999999999877 89999
Q ss_pred eeeccccccCCCCCce-eeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCc
Q 005040 570 SDFGISKLLGEGEDSV-IQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDE 632 (717)
Q Consensus 570 ~Dfgl~~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~ 632 (717)
+|+|+++.+...-... .....+.|.+|+|||.+.+ ..||.+.||||.|||+.||+|-++-|.+
T Consensus 178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g 242 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG 242 (438)
T ss_pred ecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence 9999999886543322 2334567999999997665 5699999999999999999999887755
No 314
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.4e-34 Score=297.07 Aligned_cols=264 Identities=25% Similarity=0.304 Sum_probs=197.2
Q ss_pred CCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEcc
Q 005040 429 FNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFM 505 (717)
Q Consensus 429 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 505 (717)
|+..+.||.|++|.||+|... +|+.||+|++.... ......+.+|+++++.++|||++++++++.+.+..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 567789999999999999865 79999999987543 222356788999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 506 PNGSLEKWLYSHN-YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 506 ~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
+ ++|.+++.... ..+++..+..++.|+++||+||| +.+++||||+|+||+++.++.++|+|||++.........
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH----~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~ 155 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCH----SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT 155 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccc
Confidence 5 69999997654 35899999999999999999999 678999999999999999999999999999765432211
Q ss_pred eeeeccccCccccCCCccCCC-CcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhC-CCch-----hhhcc
Q 005040 585 VIQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESL-PHRL-----TEVVD 657 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~ 657 (717)
.....++..|+|||++.+. .++.++||||||+++|||++|+.||...... ........... +... ....+
T Consensus 156 --~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd07835 156 --YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEI-DQLFRIFRTLGTPDEDVWPGVTSLPD 232 (283)
T ss_pred --cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCChHHhhhhhhchh
Confidence 1223468889999987654 5789999999999999999999998653221 11111111100 0000 00000
Q ss_pred --ccchhhh--hhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 658 --ANLVREE--QAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 658 --~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
..+.... .........+.++.+++.+|++.+|++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 233 YKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0000000 000011233466889999999999999999999875
No 315
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.1e-34 Score=305.30 Aligned_cols=267 Identities=24% Similarity=0.294 Sum_probs=197.8
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeeeecC-----Cee
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSCSNL-----DFK 498 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~-----~~~ 498 (717)
.++|++.+.||+|+||.||+|... +|+.||+|.+.... ......+.+|+.++++++||||+++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 468999999999999999999865 78999999986432 33445678899999999999999999886543 357
Q ss_pred EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeecccccc
Q 005040 499 ALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLL 578 (717)
Q Consensus 499 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 578 (717)
++|+||++ ++|.+++... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 84 ~lv~e~~~-~~l~~~~~~~--~l~~~~~~~i~~ql~~aL~~LH----~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~ 156 (336)
T cd07849 84 YIVQELME-TDLYKLIKTQ--HLSNDHIQYFLYQILRGLKYIH----SANVLHRDLKPSNLLLNTNCDLKICDFGLARIA 156 (336)
T ss_pred EEEehhcc-cCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHEEECCCCCEEECcccceeec
Confidence 99999996 5888888654 4899999999999999999999 678999999999999999999999999999865
Q ss_pred CCCCCce-eeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCC----Cch
Q 005040 579 GEGEDSV-IQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLP----HRL 652 (717)
Q Consensus 579 ~~~~~~~-~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~----~~~ 652 (717)
....... ......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||.+... ............ +..
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~--~~~~~~~~~~~~~~~~~~~ 234 (336)
T cd07849 157 DPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDY--LHQLNLILGVLGTPSQEDL 234 (336)
T ss_pred cccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHcCCCCHHHH
Confidence 4322111 1123467899999997644 5689999999999999999999999965321 111111111111 111
Q ss_pred hhhccccchhhh------hh---hhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 653 TEVVDANLVREE------QA---FSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 653 ~~~~~~~~~~~~------~~---~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
..+.+....... .. .......+.++.+++.+||+.+|++|||+.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 235 NCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 111111100000 00 00011235668899999999999999999999886
No 316
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.1e-34 Score=298.72 Aligned_cols=254 Identities=25% Similarity=0.303 Sum_probs=194.7
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcC-CCceeeEeeeeecCCeeEEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVR-HRNLLKILGSCSNLDFKALVLE 503 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-hpniv~~~~~~~~~~~~~lv~e 503 (717)
++|+..+.||+|+||.||++... +++.||+|.+.... ......+.+|+.++.++. ||||+++++++......+++||
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e 83 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME 83 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence 35566788999999999999875 68999999987543 234456888999999996 9999999999998889999999
Q ss_pred ccCCCCHHHHHh---h-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccC
Q 005040 504 FMPNGSLEKWLY---S-HNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLG 579 (717)
Q Consensus 504 ~~~~g~L~~~l~---~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 579 (717)
|+. +++.++.. . ....+++..+..++.|++.||+|||+ ..+++||||||+||+++.++.++|+|||++....
T Consensus 84 ~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 84 LMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE---ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred ccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh---cCCeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 986 46655432 2 23558999999999999999999994 3589999999999999999999999999997654
Q ss_pred CCCCceeeeccccCccccCCCccCCC---CcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhc
Q 005040 580 EGEDSVIQTMTMATIGYMAPEYGSEG---IVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVV 656 (717)
Q Consensus 580 ~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (717)
.... .....++..|+|||++.+. .++.++||||+|+++|||++|+.||.... .............
T Consensus 160 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----~~~~~~~~~~~~~----- 227 (288)
T cd06616 160 DSIA---KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN----SVFDQLTQVVKGD----- 227 (288)
T ss_pred cCCc---cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc----hHHHHHhhhcCCC-----
Confidence 3221 1233578899999988776 68999999999999999999999986532 1111111111000
Q ss_pred cccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 657 DANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
.+.+.. .....++.++.+++.+|++.+|++|||+.++++.
T Consensus 228 ~~~~~~-----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 228 PPILSN-----SEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CCcCCC-----cCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000100 0112355678999999999999999999998874
No 317
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=4.4e-34 Score=292.36 Aligned_cols=242 Identities=22% Similarity=0.280 Sum_probs=186.2
Q ss_pred cccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHH---hcCCCceeeEeeeeecCCeeEEEEEccC
Q 005040 434 LLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILR---NVRHRNLLKILGSCSNLDFKALVLEFMP 506 (717)
Q Consensus 434 ~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~---~l~hpniv~~~~~~~~~~~~~lv~e~~~ 506 (717)
.||+|+||.||++... +++.+|+|.+.... ......+.+|..+++ ..+||+|+.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999875 68999999886532 111223344444433 3479999999999999899999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCcee
Q 005040 507 NGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVI 586 (717)
Q Consensus 507 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~ 586 (717)
+|+|.+++...+ .+++..+..++.|++.||.||| +.+|+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH----~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~---- 151 (279)
T cd05633 81 GGDLHYHLSQHG-VFSEKEMRFYATEIILGLEHMH----NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---- 151 (279)
T ss_pred CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC----
Confidence 999999988654 4899999999999999999999 6789999999999999999999999999987654322
Q ss_pred eeccccCccccCCCccC-CCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhh
Q 005040 587 QTMTMATIGYMAPEYGS-EGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQ 665 (717)
Q Consensus 587 ~~~~~~t~~y~aPE~~~-~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (717)
.....|+..|+|||... +..++.++||||+||++|||++|+.||......... ........ ....
T Consensus 152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~--~~~~~~~~------~~~~------ 217 (279)
T cd05633 152 PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EIDRMTLT------VNVE------ 217 (279)
T ss_pred ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH--HHHHHhhc------CCcC------
Confidence 12346899999999876 456899999999999999999999999754322111 11000000 0000
Q ss_pred hhhhhHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 005040 666 AFSDKMDCLFSIMDLALDCCMDTPHKRI-----HMTDAAAK 701 (717)
Q Consensus 666 ~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~ev~~~ 701 (717)
.+..++.++.+++.+|+..||++|| |++|+++.
T Consensus 218 ---~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 218 ---LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred ---CccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 1113456688999999999999999 58888774
No 318
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.8e-35 Score=323.25 Aligned_cols=255 Identities=27% Similarity=0.395 Sum_probs=191.1
Q ss_pred HHhccCCccccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcCCCceeeEeeee---------
Q 005040 424 RATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVRHRNLLKILGSC--------- 492 (717)
Q Consensus 424 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~--------- 492 (717)
+-..+|+....||+||||.||+++.+ ||+.+|||++.... ......+.+|++++++|+|||||+++..+
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 34568999999999999999999988 99999999987553 44566788999999999999999997211
Q ss_pred ---------------------------------------------------e------c---------------------
Q 005040 493 ---------------------------------------------------S------N--------------------- 494 (717)
Q Consensus 493 ---------------------------------------------------~------~--------------------- 494 (717)
. .
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence 0 0
Q ss_pred ------------------------C--------CeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 005040 495 ------------------------L--------DFKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHH 542 (717)
Q Consensus 495 ------------------------~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~ 542 (717)
. -.+|+-||||+...+.++++.+...-.....++++.+|++||.|+|
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH- 714 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIH- 714 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH-
Confidence 0 1357889999987777777766532256778999999999999999
Q ss_pred cCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccC----------------CCCCceeeeccccCccccCCCccCCC-
Q 005040 543 CHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLG----------------EGEDSVIQTMTMATIGYMAPEYGSEG- 605 (717)
Q Consensus 543 ~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~----------------~~~~~~~~~~~~~t~~y~aPE~~~~~- 605 (717)
+.+||||||||.||++|++..|||+|||+++... .+......+..+||.-|+|||++.+.
T Consensus 715 ---~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~ 791 (1351)
T KOG1035|consen 715 ---DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS 791 (1351)
T ss_pred ---hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc
Confidence 7889999999999999999999999999998721 00111234567899999999987654
Q ss_pred --CcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhh
Q 005040 606 --IVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALD 683 (717)
Q Consensus 606 --~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 683 (717)
.|+.|+|+||+||+++||+. ||....+.-..+....+..+|.. ....+++. ..-..+|+.
T Consensus 792 ~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~-~~f~~~~~--------------~~e~slI~~ 853 (1351)
T KOG1035|consen 792 SNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEP-ADFFDPEH--------------PEEASLIRW 853 (1351)
T ss_pred cccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCC-cccccccc--------------hHHHHHHHH
Confidence 59999999999999999983 45442211111111111112211 12222222 234589999
Q ss_pred ccCCCCCCCCCHHHHHH
Q 005040 684 CCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 684 cl~~~P~~Rpt~~ev~~ 700 (717)
+++.||.+||||.|++.
T Consensus 854 Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 854 LLSHDPSKRPTATELLN 870 (1351)
T ss_pred HhcCCCccCCCHHHHhh
Confidence 99999999999999875
No 319
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.7e-34 Score=300.30 Aligned_cols=266 Identities=25% Similarity=0.288 Sum_probs=198.2
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhhH--HHHHHHHHHHHHHHhcCCCceeeEeeeeecC--CeeEE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLE--RAFRSFDSECEILRNVRHRNLLKILGSCSNL--DFKAL 500 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~--~~~~l 500 (717)
.++|++.+.||+|+||.||+|... +|+.||+|++..... .....+.+|++++++++||||+++++++.+. +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 468999999999999999999975 689999999864431 1223456799999999999999999998654 56899
Q ss_pred EEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCC
Q 005040 501 VLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGE 580 (717)
Q Consensus 501 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 580 (717)
||||++ ++|.+++......+++..+..++.|+++||+||| +.+++||||||+||+++.++.+||+|||++.....
T Consensus 86 v~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 86 VMEYCE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLH----ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGL 160 (309)
T ss_pred EEecCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence 999996 5899998876566899999999999999999999 67899999999999999999999999999987653
Q ss_pred CCCceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhh----
Q 005040 581 GEDSVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEV---- 655 (717)
Q Consensus 581 ~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---- 655 (717)
.... .....++..|+|||.+.+ ..++.++||||+|+++|||++|+.||..... ......+...........
T Consensus 161 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07845 161 PAKP--MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSE--IEQLDLIIQLLGTPNESIWPGF 236 (309)
T ss_pred ccCC--CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHhcCCCChhhchhh
Confidence 3211 122345788999998765 5678999999999999999999999975322 111111111111000000
Q ss_pred cc----cc--chhhh-hhh-hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 656 VD----AN--LVREE-QAF-SDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 656 ~~----~~--~~~~~-~~~-~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.+ .. +.... ... ......+.++.++|.+|++.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 237 SDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred hcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00 00 00000 000 000113566789999999999999999999985
No 320
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=2.9e-34 Score=295.02 Aligned_cols=265 Identities=22% Similarity=0.307 Sum_probs=198.8
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhhH-HHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEcc
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLE-RAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFM 505 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 505 (717)
+|+..+.||.|++|.||+|+.. +|+.||+|++..... .....+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4788899999999999999976 789999999875532 23356678999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 506 PNGSLEKWLYSHN--YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 506 ~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
++ +|.+++.... ..+++..+..++.|++.||.||| +.+++||||||+||++++++.++++|||++........
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~ 155 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCH----ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN 155 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc
Confidence 74 8999887543 45899999999999999999999 67899999999999999999999999999976543211
Q ss_pred ceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhC-C--Cchhhhcc--
Q 005040 584 SVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESL-P--HRLTEVVD-- 657 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~-- 657 (717)
......++..|+|||+..+ ..++.++||||+|+++|||++|+.||.+.... ........... + ..+.....
T Consensus 156 --~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07836 156 --TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNE-DQLLKIFRIMGTPTESTWPGISQLP 232 (284)
T ss_pred --ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCCCChhhHHHHhcCc
Confidence 1123456889999998755 45788999999999999999999999753221 11111111100 0 00000000
Q ss_pred ---ccchh--hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 658 ---ANLVR--EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 658 ---~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
..... ...........+.++.+++.+|++.||++||+++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 233 EYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred hhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000 00000011134567889999999999999999999875
No 321
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-35 Score=280.71 Aligned_cols=251 Identities=25% Similarity=0.271 Sum_probs=203.4
Q ss_pred HhccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEE
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKAL 500 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~l 500 (717)
..++|+..++||+|.||.|..++-+ +++.+|+|++++.. +.....-..|-++|+..+||.+..+...|+..+++|+
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence 4578999999999999999999865 89999999998775 4445666789999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCC
Q 005040 501 VLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGE 580 (717)
Q Consensus 501 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 580 (717)
||||+.||.|.-++..... +++....-.-..|+.||.||| +++||.||+|.+|.++|.+|++||+|||+++.--.
T Consensus 246 VMeyanGGeLf~HLsrer~-FsE~RtRFYGaEIvsAL~YLH----s~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~ 320 (516)
T KOG0690|consen 246 VMEYANGGELFFHLSRERV-FSEDRTRFYGAEIVSALGYLH----SRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK 320 (516)
T ss_pred EEEEccCceEeeehhhhhc-ccchhhhhhhHHHHHHhhhhh----hCCeeeeechhhhheeccCCceEeeecccchhccc
Confidence 9999999999988876544 777777778889999999999 78999999999999999999999999999975322
Q ss_pred CCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccc
Q 005040 581 GEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANL 660 (717)
Q Consensus 581 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (717)
........+|||.|+|||++....|+...|+|.+||++|||++|+.||....-+ .+-..+. +-|-++
T Consensus 321 --~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~--kLFeLIl---------~ed~kF 387 (516)
T KOG0690|consen 321 --YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE--KLFELIL---------MEDLKF 387 (516)
T ss_pred --ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh--HHHHHHH---------hhhccC
Confidence 223345679999999999999999999999999999999999999998652111 1111111 001111
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCC--HHHHHHHH
Q 005040 661 VREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIH--MTDAAAKL 702 (717)
Q Consensus 661 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt--~~ev~~~L 702 (717)
+ ...+.++..++...+..||.+|.. ..++.+..
T Consensus 388 -------P--r~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~ 422 (516)
T KOG0690|consen 388 -------P--RTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIM 422 (516)
T ss_pred -------C--ccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHH
Confidence 1 133456789999999999999983 44554443
No 322
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-35 Score=284.57 Aligned_cols=265 Identities=21% Similarity=0.327 Sum_probs=218.3
Q ss_pred HHHHhccCCccccccccccEEEEEEEec------CCCeEEEEEechhhHH-HHHHHHHHHHHHHhcCCCceeeEeeee-e
Q 005040 422 IRRATDEFNECNLLGTGGFGSVYKGTLS------DGTNVAIKIFNLQLER-AFRSFDSECEILRNVRHRNLLKILGSC-S 493 (717)
Q Consensus 422 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~hpniv~~~~~~-~ 493 (717)
+.....+++....+.+|.||.||.|.|+ +.+.|-||.++....+ +...+..|.-.+..+.|||+.++.+++ +
T Consensus 279 l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie 358 (563)
T KOG1024|consen 279 LTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIE 358 (563)
T ss_pred hhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEee
Confidence 3444466777788999999999999764 3445677776655433 445678899999999999999999987 4
Q ss_pred cCCeeEEEEEccCCCCHHHHHhhC-------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCc
Q 005040 494 NLDFKALVLEFMPNGSLEKWLYSH-------NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMV 566 (717)
Q Consensus 494 ~~~~~~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~ 566 (717)
+.+..++++.++.-|+|..|+... ...+...+...++.|++.|++||| .++|||.||.++|.++|+..+
T Consensus 359 ~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh----~~~ViHkDiAaRNCvIdd~Lq 434 (563)
T KOG1024|consen 359 DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH----NHGVIHKDIAARNCVIDDQLQ 434 (563)
T ss_pred ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH----hcCcccchhhhhcceehhhee
Confidence 456778999999999999999822 344667788899999999999999 789999999999999999999
Q ss_pred EEEeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHH
Q 005040 567 AHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVK 645 (717)
Q Consensus 567 ~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~ 645 (717)
+||+|-.+++++.+.+.+........+..||+||.+....|+.++|||||||++|||+| |+.||.+-.+- .+..+.+
T Consensus 435 VkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPf--Em~~ylk 512 (563)
T KOG1024|consen 435 VKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPF--EMEHYLK 512 (563)
T ss_pred EEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHH--HHHHHHh
Confidence 99999999999988888777777788999999999999999999999999999999999 99998764332 2222222
Q ss_pred hhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHhh
Q 005040 646 ESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKAKF 709 (717)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~~~ 709 (717)
. ......+-.|+.++..++..||+.+|++||+++|++.-|.+...+.
T Consensus 513 d-----------------GyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ql 559 (563)
T KOG1024|consen 513 D-----------------GYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQL 559 (563)
T ss_pred c-----------------cceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHH
Confidence 1 1122344578999999999999999999999999999999987764
No 323
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-34 Score=322.88 Aligned_cols=259 Identities=25% Similarity=0.436 Sum_probs=210.5
Q ss_pred ccCCccccccccccEEEEEEEec----C----CCeEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCC
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS----D----GTNVAIKIFNLQL-ERAFRSFDSECEILRNV-RHRNLLKILGSCSNLD 496 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~----~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~ 496 (717)
++..+.+.+|+|.||.||+|... . ...||||.++... ....+.+..|+++|+.+ +||||+.++|+|...+
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG 375 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence 44455669999999999999843 1 4569999987655 34567889999999999 6999999999999999
Q ss_pred eeEEEEEccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeee
Q 005040 497 FKALVLEFMPNGSLEKWLYSHN---------------YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILL 561 (717)
Q Consensus 497 ~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill 561 (717)
..++|+||+..|+|.+|++..+ ..++......++.|||.|++||+ +.++||||+.++|||+
T Consensus 376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~----~~~~vHRDLAaRNVLi 451 (609)
T KOG0200|consen 376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA----SVPCVHRDLAARNVLI 451 (609)
T ss_pred ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh----hCCccchhhhhhhEEe
Confidence 9999999999999999999766 34888999999999999999999 7889999999999999
Q ss_pred CCCCcEEEeeeccccccCCCCCceeeecc-ccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcch
Q 005040 562 DENMVAHVSDFGISKLLGEGEDSVIQTMT-MATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMS 639 (717)
Q Consensus 562 ~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~-~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~ 639 (717)
+.+..+||+|||+++.............. .-+..|||||.+....|+.|+|||||||++||++| |..||.+.. ....
T Consensus 452 ~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~-~~~~ 530 (609)
T KOG0200|consen 452 TKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP-PTEE 530 (609)
T ss_pred cCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC-cHHH
Confidence 99999999999999976554433322111 13566999999999999999999999999999999 889987621 1111
Q ss_pred HHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHH
Q 005040 640 LRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKA 707 (717)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~ 707 (717)
+.+++++ ......+..|..++.++++.||+.+|++||++.|+++.++....
T Consensus 531 l~~~l~~-----------------G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 531 LLEFLKE-----------------GNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ 581 (609)
T ss_pred HHHHHhc-----------------CCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence 1222221 11223344677889999999999999999999999999998543
No 324
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2.2e-34 Score=299.99 Aligned_cols=268 Identities=21% Similarity=0.280 Sum_probs=195.4
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCC------
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLD------ 496 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~------ 496 (717)
.++|+..+.||+|+||.||+|... +++.||+|.+.... ......+.+|++++++++||||+++++++...+
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 457999999999999999999975 78999999886443 222335567999999999999999999886544
Q ss_pred --eeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeecc
Q 005040 497 --FKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGI 574 (717)
Q Consensus 497 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 574 (717)
..++||||+. ++|.+++......+++..+..++.|++.||+||| +.+++|+||||+||+++.++.+||+|||+
T Consensus 91 ~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH----~~~i~H~dl~p~nil~~~~~~~kl~dfg~ 165 (310)
T cd07865 91 KGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIH----RNKILHRDMKAANILITKDGILKLADFGL 165 (310)
T ss_pred CceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHEEECCCCcEEECcCCC
Confidence 4599999996 5899888876656899999999999999999999 67899999999999999999999999999
Q ss_pred ccccCCCCCc--eeeeccccCccccCCCccCCC-CcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHh---hC
Q 005040 575 SKLLGEGEDS--VIQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKE---SL 648 (717)
Q Consensus 575 ~~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~---~~ 648 (717)
+......... .......++..|+|||+..+. .++.++||||||+++|||++|+.||...... .....+.. ..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~--~~~~~~~~~~~~~ 243 (310)
T cd07865 166 ARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQ--HQLTLISQLCGSI 243 (310)
T ss_pred cccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCC
Confidence 9866432211 111234568889999987654 4788999999999999999999998653221 11111111 01
Q ss_pred CCc-hhhh-----ccc-cchhhhh-hhh---hhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 649 PHR-LTEV-----VDA-NLVREEQ-AFS---DKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 649 ~~~-~~~~-----~~~-~~~~~~~-~~~---~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
+.. .... .+. .+..... ... ...-....+.+++.+||..||++|||++|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 244 TPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred ChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 100 0000 000 0000000 000 00011345779999999999999999999875
No 325
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=5.4e-34 Score=288.63 Aligned_cols=251 Identities=27% Similarity=0.346 Sum_probs=204.2
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecC--CeeEEEE
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNL--DFKALVL 502 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~--~~~~lv~ 502 (717)
+|+..+.||+|++|.||+|... +++.|++|++.... ....+.+.+|++++++++||||+++++.+.+. ...++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4677889999999999999976 78999999987654 24557788999999999999999999999888 8899999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
||+++++|.+++.+.. .+++..+..++.|+++|++||| +.+++|+|++|+||+++.++.++|+|||.+.......
T Consensus 81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh----~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 155 (260)
T cd06606 81 EYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLH----SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIE 155 (260)
T ss_pred EecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCccccCCCHHHEEEcCCCCEEEcccccEEeccccc
Confidence 9999999999998765 5899999999999999999999 6789999999999999999999999999998775443
Q ss_pred CceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchh
Q 005040 583 DSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVR 662 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (717)
.........++..|+|||...+..++.++||||||+++|+|++|+.||...... .............
T Consensus 156 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~---------- 222 (260)
T cd06606 156 TGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNP---MAALYKIGSSGEP---------- 222 (260)
T ss_pred ccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch---HHHHHhccccCCC----------
Confidence 211123446788999999998888999999999999999999999999764311 1100000000000
Q ss_pred hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 663 EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 663 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
. ..+...+..+.+++.+|+..+|++||++.|++.
T Consensus 223 --~--~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 223 --P--EIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred --c--CCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 0 011122466889999999999999999999975
No 326
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2.7e-34 Score=290.59 Aligned_cols=248 Identities=23% Similarity=0.358 Sum_probs=199.8
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
+|+..+.||+|+||.||+|..+ +|..||+|.+.... ....+.+.+|+++++.++||||+++++++.+....++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4778899999999999999976 68899999987542 12345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC-cEEEeeeccccccCCCC
Q 005040 505 MPNGSLEKWLYSHN-YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENM-VAHVSDFGISKLLGEGE 582 (717)
Q Consensus 505 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfgl~~~~~~~~ 582 (717)
+++++|.+++.... ..+++..+..++.|+++|+.||| +.+++|+||||+||++++++ .++++|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh----~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIH----DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM 156 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH----HCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc
Confidence 99999999997643 35799999999999999999999 67899999999999999886 46999999998764332
Q ss_pred CceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchh
Q 005040 583 DSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVR 662 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (717)
. ......|++.|+|||+..+..++.++|+||||+++|||++|+.||.... ..+++...........
T Consensus 157 ~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~------- 222 (257)
T cd08225 157 E--LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN-----LHQLVLKICQGYFAPI------- 222 (257)
T ss_pred c--cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHhcccCCCC-------
Confidence 1 1223457889999999888889999999999999999999999986532 1222222111111000
Q ss_pred hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 663 EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 663 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
....+.++.+++.+|+..+|++|||+.|+++
T Consensus 223 -------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 223 -------SPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred -------CCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 0123456889999999999999999999976
No 327
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=8e-34 Score=288.41 Aligned_cols=245 Identities=22% Similarity=0.248 Sum_probs=192.4
Q ss_pred HHhccCCccccc--cccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCCeeE
Q 005040 424 RATDEFNECNLL--GTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNV-RHRNLLKILGSCSNLDFKA 499 (717)
Q Consensus 424 ~~~~~~~~~~~l--g~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~ 499 (717)
...++|++.+.+ |+|+||.||++..+ +++.+|+|++....... .|+.....+ +||||+++++++...+..+
T Consensus 11 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 85 (267)
T PHA03390 11 QFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTTLKGHV 85 (267)
T ss_pred HHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEecCCeeE
Confidence 334677777776 99999999999865 78889999986542111 122222222 7999999999999999999
Q ss_pred EEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC-cEEEeeecccccc
Q 005040 500 LVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENM-VAHVSDFGISKLL 578 (717)
Q Consensus 500 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfgl~~~~ 578 (717)
+||||+++++|.+++.... .+++..+..++.|+++|+.||| +.+++||||||+||+++.++ .++|+|||++...
T Consensus 86 iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~ 160 (267)
T PHA03390 86 LIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLH----KHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKII 160 (267)
T ss_pred EEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCeeeCCCCHHHEEEeCCCCeEEEecCccceec
Confidence 9999999999999998764 5899999999999999999999 67899999999999999988 9999999998765
Q ss_pred CCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccc
Q 005040 579 GEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDA 658 (717)
Q Consensus 579 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (717)
.... ...++..|+|||++.+..++.++||||+|+++|||++|+.||............+.... ...
T Consensus 161 ~~~~------~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~------- 226 (267)
T PHA03390 161 GTPS------CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKK------- 226 (267)
T ss_pred CCCc------cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-ccc-------
Confidence 4321 23578899999999988999999999999999999999999975433332233332211 000
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCC-HHHHHH
Q 005040 659 NLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIH-MTDAAA 700 (717)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt-~~ev~~ 700 (717)
.......+..+.+++.+||+.+|.+||+ ++|+++
T Consensus 227 --------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 227 --------LPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred --------CCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 0001134566889999999999999996 588874
No 328
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-35 Score=323.03 Aligned_cols=257 Identities=23% Similarity=0.328 Sum_probs=211.2
Q ss_pred HHHHHhccCCccccccccccEEEEEEEec-CCCeEEEEEechh---hHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCC
Q 005040 421 DIRRATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQ---LERAFRSFDSECEILRNVRHRNLLKILGSCSNLD 496 (717)
Q Consensus 421 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~ 496 (717)
.++-..++|++++.||+|+||.|..++++ +++.||.|++.+- .+.....|..|-.+|..-+.+.|+.+...|++..
T Consensus 69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~ 148 (1317)
T KOG0612|consen 69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDER 148 (1317)
T ss_pred HHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCcc
Confidence 45666789999999999999999999976 7888999999763 2445567889999999999999999999999999
Q ss_pred eeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeecccc
Q 005040 497 FKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISK 576 (717)
Q Consensus 497 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 576 (717)
++|+|||||+||||-..+.+.. .+|+..+.-++..|+-||.-+| +.|+|||||||+|||+|..|++||+|||.+-
T Consensus 149 ~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH----~mgyVHRDiKPDNvLld~~GHikLADFGsCl 223 (1317)
T KOG0612|consen 149 YLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLH----SMGYVHRDIKPDNVLLDKSGHIKLADFGSCL 223 (1317)
T ss_pred ceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHH----hccceeccCCcceeEecccCcEeeccchhHH
Confidence 9999999999999999999887 6999999999999999999999 7899999999999999999999999999998
Q ss_pred ccCCCCCceeeeccccCccccCCCccC----C-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCc
Q 005040 577 LLGEGEDSVIQTMTMATIGYMAPEYGS----E-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHR 651 (717)
Q Consensus 577 ~~~~~~~~~~~~~~~~t~~y~aPE~~~----~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 651 (717)
.+... ........+|||.|.+||++. + +.|+..+|+||+||++|||+.|..||-.. .....+-+..
T Consensus 224 km~~d-G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad----slveTY~KIm---- 294 (1317)
T KOG0612|consen 224 KMDAD-GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD----SLVETYGKIM---- 294 (1317)
T ss_pred hcCCC-CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH----HHHHHHHHHh----
Confidence 87643 345567789999999999643 3 67999999999999999999999998642 1112221111
Q ss_pred hhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCC---HHHHHH
Q 005040 652 LTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIH---MTDAAA 700 (717)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt---~~ev~~ 700 (717)
+. .+.-.+|...+.+.++.+||.+.+. +|+.|.. +.++..
T Consensus 295 -----~h---k~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~ 337 (1317)
T KOG0612|consen 295 -----NH---KESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKN 337 (1317)
T ss_pred -----ch---hhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHh
Confidence 11 0111233334567778899998886 7888887 777654
No 329
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=5.7e-34 Score=289.11 Aligned_cols=242 Identities=27% Similarity=0.310 Sum_probs=194.0
Q ss_pred ccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCCCCH
Q 005040 435 LGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPNGSL 510 (717)
Q Consensus 435 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L 510 (717)
||.|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+....++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999975 58999999987543 23446788999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceeeecc
Q 005040 511 EKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQTMT 590 (717)
Q Consensus 511 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~ 590 (717)
.+++.+.. .+++..+..++.|+++||+||| +.+++|+||+|+||+++.++.++|+|||++....... .....
T Consensus 81 ~~~l~~~~-~l~~~~~~~~~~~i~~~l~~lH----~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~~~~ 152 (262)
T cd05572 81 WTILRDRG-LFDEYTARFYIACVVLAFEYLH----NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWTF 152 (262)
T ss_pred HHHHhhcC-CCCHHHHHHHHHHHHHHHHHHh----hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---ccccc
Confidence 99998754 3789999999999999999999 6789999999999999999999999999998764432 12234
Q ss_pred ccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhhh
Q 005040 591 MATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSDK 670 (717)
Q Consensus 591 ~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (717)
.++..|+|||...+..++.++|+||+|+++|||++|..||....... .+...... +.... ...+
T Consensus 153 ~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~--------~~~~~-----~~~~ 216 (262)
T cd05572 153 CGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP---MEIYNDIL--------KGNGK-----LEFP 216 (262)
T ss_pred cCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH---HHHHHHHh--------ccCCC-----CCCC
Confidence 57889999999888889999999999999999999999997643211 11111111 00000 0001
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 005040 671 MDCLFSIMDLALDCCMDTPHKRIH-----MTDAAA 700 (717)
Q Consensus 671 ~~~~~~l~~li~~cl~~~P~~Rpt-----~~ev~~ 700 (717)
...+.++.+++.+||+.+|++||+ ++|+++
T Consensus 217 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 217 NYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred cccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 122456889999999999999999 555554
No 330
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=3.7e-34 Score=299.10 Aligned_cols=268 Identities=21% Similarity=0.246 Sum_probs=196.9
Q ss_pred cCCccccccccccEEEEEEEec---CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecC--CeeE
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS---DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNL--DFKA 499 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~--~~~~ 499 (717)
+|++.+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++.+. ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4788899999999999999975 47899999987633 33345677899999999999999999999888 7899
Q ss_pred EEEEccCCCCHHHHHhhC----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCC----CCcEEEee
Q 005040 500 LVLEFMPNGSLEKWLYSH----NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDE----NMVAHVSD 571 (717)
Q Consensus 500 lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~----~~~~kl~D 571 (717)
+||||+++ ++.+++... ...+++..++.++.|++.||+||| +.+|+||||||+||+++. ++.+||+|
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~h~dlkp~Nil~~~~~~~~~~~kl~D 155 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH----SNWVLHRDLKPANILVMGEGPERGVVKIGD 155 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH----hCCEeeCCCCHHHEEEcCCCCccceEEECC
Confidence 99999974 777777532 235889999999999999999999 678999999999999999 99999999
Q ss_pred eccccccCCCCC-ceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCc--------chHH
Q 005040 572 FGISKLLGEGED-SVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGE--------MSLR 641 (717)
Q Consensus 572 fgl~~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~--------~~~~ 641 (717)
||++........ ........++..|+|||+..+ ..++.++||||||+++|||++|+.||....... ..+.
T Consensus 156 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (316)
T cd07842 156 LGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLE 235 (316)
T ss_pred CccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHH
Confidence 999987643322 111223457889999997665 458899999999999999999999997643322 0111
Q ss_pred HHHHhhCCC------------chhhhcc----ccchh--hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 642 RWVKESLPH------------RLTEVVD----ANLVR--EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 642 ~~~~~~~~~------------~~~~~~~----~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
......... ......+ ..... ...........+.++.+++.+|++.||++|||+.|+++
T Consensus 236 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 236 RIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 111100000 0000000 00000 00000000133456889999999999999999999975
No 331
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=4.9e-34 Score=302.35 Aligned_cols=265 Identities=22% Similarity=0.241 Sum_probs=197.8
Q ss_pred HhccCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecC------
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNL------ 495 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~------ 495 (717)
..++|+..+.||+|+||.||+|... +++.||+|++.... ......+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4578999999999999999999865 78999999986432 23345677899999999999999999987543
Q ss_pred CeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccc
Q 005040 496 DFKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGIS 575 (717)
Q Consensus 496 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 575 (717)
...|+||||+. ++|.+++... +++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH----~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~ 165 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD---LDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLA 165 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc---CCHHHHHHHHHHHHHHHHHHH----hCCeeeCCCCHHHEEECCCCCEEEccCccc
Confidence 35799999996 5898888653 788999999999999999999 679999999999999999999999999999
Q ss_pred cccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCC--Cchh
Q 005040 576 KLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLP--HRLT 653 (717)
Q Consensus 576 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~ 653 (717)
........ .....++..|+|||.+.+..++.++||||+||++|+|++|+.||..... ............. ....
T Consensus 166 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~ 241 (353)
T cd07850 166 RTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDH-IDQWNKIIEQLGTPSDEFM 241 (353)
T ss_pred eeCCCCCC---CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHhcCCCCHHHH
Confidence 87643221 2234578899999999999999999999999999999999999965321 1111111110000 0000
Q ss_pred hhcc--------ccch-------hhhhh--h-----hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 654 EVVD--------ANLV-------REEQA--F-----SDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 654 ~~~~--------~~~~-------~~~~~--~-----~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
..++ .... ...+. . ......+.++.+++.+||+.||++|||+.|+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 242 SRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000 0000 00000 0 0011235568899999999999999999999864
No 332
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=2.3e-34 Score=296.29 Aligned_cols=244 Identities=23% Similarity=0.312 Sum_probs=196.8
Q ss_pred cccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCCCCH
Q 005040 432 CNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPNGSL 510 (717)
Q Consensus 432 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L 510 (717)
...||+|+||.||+|..+ +++.||+|.+..........+.+|+.+++.++|||++++++++.+.+..++||||+++++|
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 357999999999999875 7899999988655445556788999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceeeecc
Q 005040 511 EKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQTMT 590 (717)
Q Consensus 511 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~ 590 (717)
.+++... .+++..+..++.|++.|++||| +.+++||||+|+||+++.++.++|+|||++........ .....
T Consensus 105 ~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH----~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~--~~~~~ 176 (292)
T cd06657 105 TDIVTHT--RMNEEQIAAVCLAVLKALSVLH----AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKSL 176 (292)
T ss_pred HHHHhcC--CCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEECCCCCEEEcccccceecccccc--ccccc
Confidence 9987654 3789999999999999999999 67899999999999999999999999999876543211 12334
Q ss_pred ccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhhh
Q 005040 591 MATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSDK 670 (717)
Q Consensus 591 ~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (717)
.++..|+|||+..+..++.++|+||+|+++|||++|..||..... ...........+.... ..
T Consensus 177 ~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~--~~~~~~~~~~~~~~~~---------------~~ 239 (292)
T cd06657 177 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDNLPPKLK---------------NL 239 (292)
T ss_pred ccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhhCCcccC---------------Cc
Confidence 578999999998888889999999999999999999999864211 1111111111111110 01
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 671 MDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 671 ~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
...+..+.+++.+||+.+|.+||++.++++
T Consensus 240 ~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 240 HKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred ccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 123345779999999999999999999887
No 333
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=3.8e-34 Score=289.55 Aligned_cols=248 Identities=25% Similarity=0.362 Sum_probs=203.7
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
+|+..+.||+|+||.||++... +++.||+|++.... ......+.+|+++++.++|||++++.+.+...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4778899999999999999975 68999999987553 24556788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCC
Q 005040 505 MPNGSLEKWLYSH---NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEG 581 (717)
Q Consensus 505 ~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 581 (717)
+++++|.+++... ...+++..+..++.+++.|+.||| +.+++|+||+|+||+++.++.++|+|||.+......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh----~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 156 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH----SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSST 156 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH----hCCEecccCChHHeEEcCCCcEEECCccceeecccC
Confidence 9999999999865 366899999999999999999999 679999999999999999999999999999876443
Q ss_pred CCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccch
Q 005040 582 EDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLV 661 (717)
Q Consensus 582 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (717)
. .......+++.|+|||...+..++.++|+||+|+++|+|++|+.||..... .+............
T Consensus 157 ~--~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~------- 222 (258)
T cd08215 157 V--DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL-----LELALKILKGQYPP------- 222 (258)
T ss_pred c--ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH-----HHHHHHHhcCCCCC-------
Confidence 2 122334678899999998888899999999999999999999999865321 11111111100000
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 662 REEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 662 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
. +..++.++.+++.+||..+|++|||+.|+++
T Consensus 223 -----~--~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 223 -----I--PSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred -----C--CCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0 1133456889999999999999999999975
No 334
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=5.1e-34 Score=293.03 Aligned_cols=263 Identities=25% Similarity=0.299 Sum_probs=201.3
Q ss_pred CCccccccccccEEEEEEEec-CCCeEEEEEechhhH--HHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEcc
Q 005040 429 FNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLE--RAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFM 505 (717)
Q Consensus 429 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 505 (717)
|+..+.||+|++|.||+|... +++.+|+|.+..... .....+..|++++++++||||+++++++.+....++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 567789999999999999875 788999998865432 24467788999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCce
Q 005040 506 PNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSV 585 (717)
Q Consensus 506 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 585 (717)
++ ++.+++......+++..+..++.|+++||.||| +.+|+|+||+|+||+++.++.++|+|||.+....... .
T Consensus 81 ~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH----~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~--~ 153 (283)
T cd05118 81 DT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCH----SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--R 153 (283)
T ss_pred CC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHH----HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc--c
Confidence 75 999988876566899999999999999999999 6789999999999999999999999999998765433 1
Q ss_pred eeeccccCccccCCCccCCC-CcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCc----hhhhcc---
Q 005040 586 IQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHR----LTEVVD--- 657 (717)
Q Consensus 586 ~~~~~~~t~~y~aPE~~~~~-~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~--- 657 (717)
......++..|+|||...+. .++.++|+||+|+++|+|++|+.||...... ..+.... ...... .....+
T Consensus 154 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd05118 154 PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEI-DQLFKIF-RTLGTPDPEVWPKFTSLAR 231 (283)
T ss_pred cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH-HHcCCCchHhcccchhhhh
Confidence 12234578889999987766 7899999999999999999999998653221 1111111 111000 000000
Q ss_pred ---ccchhhh--hhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 658 ---ANLVREE--QAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 658 ---~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
..+.... ........++.++.++|.+||+.||.+||++.+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 232 NYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0000000 000111245678999999999999999999999875
No 335
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=3.5e-34 Score=296.16 Aligned_cols=266 Identities=22% Similarity=0.250 Sum_probs=194.9
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhhH--HHHHHHHHHHHHHHhcC-CCceeeEeeeeecCCe-----
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLE--RAFRSFDSECEILRNVR-HRNLLKILGSCSNLDF----- 497 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~-hpniv~~~~~~~~~~~----- 497 (717)
++|+..+.||+|+||.||+|... +++.||+|.+..... .....+.+|+.+++.++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 36888999999999999999975 789999998865432 22356788999999995 6999999999876655
Q ss_pred eEEEEEccCCCCHHHHHhhC----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCC-CCcEEEeee
Q 005040 498 KALVLEFMPNGSLEKWLYSH----NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDE-NMVAHVSDF 572 (717)
Q Consensus 498 ~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~-~~~~kl~Df 572 (717)
.|+||||+++ +|.+++... ...+++..+..++.||++||.||| +.+|+||||+|+||+++. ++.+||+||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH----~~~i~H~dl~~~nil~~~~~~~~kl~df 155 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH----KHGVMHRDLKPQNLLVDKQKGLLKIADL 155 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCChHHEEEecCCCeEEEeec
Confidence 7999999985 899988743 235799999999999999999999 678999999999999998 899999999
Q ss_pred ccccccCCCCCceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhh-CCC
Q 005040 573 GISKLLGEGEDSVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKES-LPH 650 (717)
Q Consensus 573 gl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~ 650 (717)
|++..+..... ......+++.|+|||++.+ ..++.++||||||+++|||++|..||....... ......... .+.
T Consensus 156 g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~ 232 (295)
T cd07837 156 GLGRAFSIPVK--SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ-QLLHIFKLLGTPT 232 (295)
T ss_pred ccceecCCCcc--ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHhCCCC
Confidence 99876532211 1122356888999997754 557999999999999999999999986532111 111111100 000
Q ss_pred c--hhhhccccchhhhh-----hh-hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 651 R--LTEVVDANLVREEQ-----AF-SDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 651 ~--~~~~~~~~~~~~~~-----~~-~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
. +............+ .. ......+.++.++|.+||..||++||++.|++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 233 EQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred hhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0 00000000000000 00 001234567899999999999999999999875
No 336
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=6.7e-34 Score=291.03 Aligned_cols=243 Identities=24% Similarity=0.301 Sum_probs=191.9
Q ss_pred ccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCCCCH
Q 005040 435 LGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPNGSL 510 (717)
Q Consensus 435 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L 510 (717)
||+|+||+||+|... +|+.||+|.+.... ......+..|+++++.++||||+++++++...+..|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999865 78999999987543 22344567899999999999999999999999999999999999999
Q ss_pred HHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceeeec
Q 005040 511 EKWLYSHN-YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQTM 589 (717)
Q Consensus 511 ~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~ 589 (717)
.+++.... ..+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++|+|||.+....... ....
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH----~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~---~~~~ 153 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLH----QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK---KIKG 153 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCC---cccc
Confidence 99998644 35899999999999999999999 6789999999999999999999999999987654321 1223
Q ss_pred cccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhh
Q 005040 590 TMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSD 669 (717)
Q Consensus 590 ~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (717)
..++..|+|||+..+..++.++||||+|+++|+|++|+.||...... ............. . ...
T Consensus 154 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~-------------~--~~~ 217 (277)
T cd05577 154 RAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEK-VEKEELKRRTLEM-------------A--VEY 217 (277)
T ss_pred ccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccc-ccHHHHHhccccc-------------c--ccC
Confidence 45788999999988888999999999999999999999999653221 1111111100000 0 001
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 005040 670 KMDCLFSIMDLALDCCMDTPHKRI-----HMTDAAA 700 (717)
Q Consensus 670 ~~~~~~~l~~li~~cl~~~P~~Rp-----t~~ev~~ 700 (717)
...++..+.+++.+||+.+|++|| ++.+++.
T Consensus 218 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 218 PDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred CccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 112356688999999999999999 5665653
No 337
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=4.2e-34 Score=296.56 Aligned_cols=270 Identities=25% Similarity=0.285 Sum_probs=200.3
Q ss_pred HHhccCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCC----
Q 005040 424 RATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLD---- 496 (717)
Q Consensus 424 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~---- 496 (717)
...++|++.+.||+|+||.||+|..+ +++.||+|+++... ......+.+|+++++.++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45678999999999999999999976 68899999986543 223346678999999999999999999986654
Q ss_pred ------eeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEe
Q 005040 497 ------FKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVS 570 (717)
Q Consensus 497 ------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~ 570 (717)
..++|+||+++ ++.+++......+++..+..++.|++.||+||| +.+|+|+||||+||++++++.+||+
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~i~H~dl~p~nili~~~~~~kl~ 158 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCH----KKNFLHRDIKCSNILLNNKGQIKLA 158 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEECCCCcEEeC
Confidence 78999999975 888888766556899999999999999999999 6789999999999999999999999
Q ss_pred eeccccccCCCCCceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhh--
Q 005040 571 DFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKES-- 647 (717)
Q Consensus 571 Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~-- 647 (717)
|||++........ .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||.... ....+.......
T Consensus 159 dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~-~~~~~~~~~~~~~~ 236 (302)
T cd07864 159 DFGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQ-ELAQLELISRLCGS 236 (302)
T ss_pred cccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHhCC
Confidence 9999987643321 11222345778999997654 457899999999999999999999996522 111111111111
Q ss_pred -CCCchhhhccccchh--------hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 648 -LPHRLTEVVDANLVR--------EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 648 -~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.+.....+....... ...........+..+.+++.+||+.+|.+||++.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 237 PCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred CChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 010011110000000 00000111123567899999999999999999999875
No 338
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-36 Score=331.51 Aligned_cols=257 Identities=25% Similarity=0.352 Sum_probs=204.3
Q ss_pred HHHHhccCCccccccccccEEEEEEEe-cCCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCee
Q 005040 422 IRRATDEFNECNLLGTGGFGSVYKGTL-SDGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFK 498 (717)
Q Consensus 422 ~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~ 498 (717)
++..+-++.....||.|.||.||.|.. .+|.-.|+|-++... ......+.+|+.++..++|||+|+++|+-...+.+
T Consensus 1230 lsnV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv 1309 (1509)
T KOG4645|consen 1230 LSNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKV 1309 (1509)
T ss_pred hccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHH
Confidence 455667888899999999999999985 578889999765443 33445678899999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeecccccc
Q 005040 499 ALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLL 578 (717)
Q Consensus 499 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 578 (717)
++.||||++|+|.+.++..+ ..++.....+..|++.|++||| +++||||||||.||+++.+|.+|++|||.|..+
T Consensus 1310 ~IFMEyC~~GsLa~ll~~gr-i~dE~vt~vyt~qll~gla~LH----~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki 1384 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEHGR-IEDEMVTRVYTKQLLEGLAYLH----EHGIVHRDIKPANILLDFNGLIKYGDFGSAVKI 1384 (1509)
T ss_pred HHHHHHhccCcHHHHHHhcc-hhhhhHHHHHHHHHHHHHHHHH----hcCceecCCCccceeeecCCcEEeecccceeEe
Confidence 99999999999999887543 3566667778899999999999 689999999999999999999999999999987
Q ss_pred CCCCCce--eeeccccCccccCCCccCCC---CcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchh
Q 005040 579 GEGEDSV--IQTMTMATIGYMAPEYGSEG---IVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLT 653 (717)
Q Consensus 579 ~~~~~~~--~~~~~~~t~~y~aPE~~~~~---~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 653 (717)
....... .-....||+.|||||++.+. ....+.||||+||++.||+||+.||.... .+..+..-+.....
T Consensus 1385 ~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~d-ne~aIMy~V~~gh~---- 1459 (1509)
T KOG4645|consen 1385 KNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELD-NEWAIMYHVAAGHK---- 1459 (1509)
T ss_pred cCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhcc-chhHHHhHHhccCC----
Confidence 6543221 12345799999999987653 35678999999999999999999997643 23222222222111
Q ss_pred hhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 654 EVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
+++++ ..+.+-.+++..|+..||++|+++.|+++.
T Consensus 1460 -----------Pq~P~--~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1460 -----------PQIPE--RLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred -----------CCCch--hhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 11122 245567799999999999999999877653
No 339
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=2.6e-34 Score=302.10 Aligned_cols=269 Identities=22% Similarity=0.279 Sum_probs=199.0
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeee----cCCee
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCS----NLDFK 498 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~----~~~~~ 498 (717)
..+|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|+.+++.++||||+++++++. .....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 368999999999999999999865 79999999987543 233456778999999999999999999875 33568
Q ss_pred EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeecccccc
Q 005040 499 ALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLL 578 (717)
Q Consensus 499 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 578 (717)
++||||+. |+|.+++..... +++..+..++.|++.||.||| +.+|+||||||+||++++++.+||+|||++...
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~i~~qi~~aL~~LH----~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQP-LTEEHIRYFLYQLLRGLKYIH----SANVIHRDLKPSNLLVNEDCELRIGDFGMARGL 157 (334)
T ss_pred EEEEehhh-hhHHHHhccCCC-CCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEEcCCCcEEecccccceee
Confidence 99999995 699999876543 899999999999999999999 678999999999999999999999999999765
Q ss_pred CCCCCc--eeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhC--CCc-h
Q 005040 579 GEGEDS--VIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESL--PHR-L 652 (717)
Q Consensus 579 ~~~~~~--~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~--~~~-~ 652 (717)
...... .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||.+.... ..+........ +.. .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~-~~~~~~~~~~g~~~~~~~ 236 (334)
T cd07855 158 SSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYV-HQLKLILSVLGSPSEEVL 236 (334)
T ss_pred cccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChH-HHHHHHHHHhCCChhHhh
Confidence 432211 11123467889999998755 56899999999999999999999999653211 11111111100 000 0
Q ss_pred hhhccccchhhh------hhh---hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 653 TEVVDANLVREE------QAF---SDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 653 ~~~~~~~~~~~~------~~~---~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
............ ... ......+.++.+++.+||+.+|++||++++++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 237 NRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 000000000000 000 0011345778999999999999999999998873
No 340
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=2e-34 Score=292.84 Aligned_cols=246 Identities=25% Similarity=0.315 Sum_probs=196.3
Q ss_pred ccccccEEEEEEEec-CCCeEEEEEechhhH---HHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCCCCH
Q 005040 435 LGTGGFGSVYKGTLS-DGTNVAIKIFNLQLE---RAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPNGSL 510 (717)
Q Consensus 435 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L 510 (717)
||+|+||.||++... +|+.+|+|++..... ...+.+.+|++++++++||||+++++.+......|+|+||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999986 599999999865432 4456788899999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC------c
Q 005040 511 EKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED------S 584 (717)
Q Consensus 511 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~------~ 584 (717)
.+++...+ .+++..+..++.|+++||+||| +.+++|+||+|+||++++++.++|+|||++........ .
T Consensus 81 ~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH----~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 155 (265)
T cd05579 81 ASLLENVG-SLDEDVARIYIAEIVLALEYLH----SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDE 155 (265)
T ss_pred HHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccc
Confidence 99998755 5899999999999999999999 67899999999999999999999999999876533211 1
Q ss_pred eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhh
Q 005040 585 VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREE 664 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (717)
.......++..|+|||...+..++.++||||||+++||+++|+.||...... ........ .. .
T Consensus 156 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--~~~~~~~~---~~--------~---- 218 (265)
T cd05579 156 KEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE--EIFQNILN---GK--------I---- 218 (265)
T ss_pred ccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHhc---CC--------c----
Confidence 1223345788999999988888999999999999999999999999653211 11111100 00 0
Q ss_pred hhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 005040 665 QAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLR 703 (717)
Q Consensus 665 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~ 703 (717)
..+.....+..+.+++.+|++.+|++|||+.++.+.|+
T Consensus 219 -~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 219 -EWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred -CCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 00111112466889999999999999999966666554
No 341
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=3.4e-34 Score=296.18 Aligned_cols=253 Identities=23% Similarity=0.279 Sum_probs=196.0
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHHHHhcC-CCceeeEeeeeecCCeeEEEE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEILRNVR-HRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-hpniv~~~~~~~~~~~~~lv~ 502 (717)
.++|++.+.||+|+||.||+|..+ +++.||||+++... ......+..|+.++.+.. ||||+++++++.+....++||
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 367888999999999999999986 48999999987543 233345666777777664 999999999999999999999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
||++ +++.+++......+++..+..++.|++.|++|||+ ..+|+||||+|+||+++.++.+||+|||++..+....
T Consensus 94 e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~---~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~ 169 (296)
T cd06618 94 ELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKE---KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK 169 (296)
T ss_pred eccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---hCCEecCCCcHHHEEEcCCCCEEECccccchhccCCC
Confidence 9985 58888777655578999999999999999999994 2589999999999999999999999999987664322
Q ss_pred CceeeeccccCccccCCCccCCCC----cCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccc
Q 005040 583 DSVIQTMTMATIGYMAPEYGSEGI----VSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDA 658 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~~~~----~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (717)
. .....++..|+|||++.+.. ++.++||||||+++|||++|+.||.........+........+
T Consensus 170 ~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~--------- 237 (296)
T cd06618 170 A---KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPP--------- 237 (296)
T ss_pred c---ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCC---------
Confidence 1 12234778899999886553 7899999999999999999999986522111111111111000
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 659 NLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
..+....++.++.+++.+||+.||++||++.++++.
T Consensus 238 -------~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 238 -------SLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred -------CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 001111245668899999999999999999999765
No 342
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.2e-34 Score=299.12 Aligned_cols=248 Identities=26% Similarity=0.336 Sum_probs=205.0
Q ss_pred HhccCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEE
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALV 501 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv 501 (717)
....|.+...||+|.|+.|..|.+. ++..||+|++++.. ....+.+.+|+++|..++|||||+++.+......+|+|
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 3468899999999999999999975 79999999998765 23345588899999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCC
Q 005040 502 LEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEG 581 (717)
Q Consensus 502 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 581 (717)
|||+.+|.+.+|+.+++. ..+..+..++.|+.+|++||| ++.|||||||++|||++.+.++||+|||++..+...
T Consensus 134 ~eya~~ge~~~yl~~~gr-~~e~~ar~~F~q~vsaveYcH----~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~ 208 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHGR-MKEKEARAKFRQIVSAVEYCH----SKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYG 208 (596)
T ss_pred EEeccCchhHHHHHhccc-chhhhhhhhhHHHHHHHHHHh----hcceeccccchhhcccccccceeeeccccceeeccc
Confidence 999999999999998876 445888899999999999999 789999999999999999999999999999988533
Q ss_pred CCceeeeccccCccccCCCccCCCCc-CcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccc
Q 005040 582 EDSVIQTMTMATIGYMAPEYGSEGIV-STKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANL 660 (717)
Q Consensus 582 ~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (717)
......+|++.|.|||+..+..| ++.+|+||+|+++|-|+.|..||++..-.+ .-++.+
T Consensus 209 ---~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~-----------------Lr~rvl 268 (596)
T KOG0586|consen 209 ---LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKE-----------------LRPRVL 268 (596)
T ss_pred ---ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccc-----------------ccchhe
Confidence 33456789999999999888765 789999999999999999999998742211 111111
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 661 VREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 661 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.+.. ..+. -.+.+..+++++++-.+|.+|++.+++.+
T Consensus 269 ~gk~-rIp~--~ms~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 269 RGKY-RIPF--YMSCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred eeee-cccc--eeechhHHHHHHhhccCccccCCHHHhhh
Confidence 1111 0111 11223458999999999999999999875
No 343
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=6.2e-34 Score=288.49 Aligned_cols=244 Identities=23% Similarity=0.250 Sum_probs=189.0
Q ss_pred ccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHH-hcCCCceeeEeeeeecCCeeEEEEEccCC
Q 005040 433 NLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILR-NVRHRNLLKILGSCSNLDFKALVLEFMPN 507 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~-~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 507 (717)
+.||+|+||.||+|... +++.||+|++.... ......+..|..++. ..+|||++++++++.+.+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 57999999999999875 68999999986543 222234445555444 45899999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceee
Q 005040 508 GSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQ 587 (717)
Q Consensus 508 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 587 (717)
++|.+++.... .+++..+..++.|++.||.||| +.+++||||+|+||+++.++.++|+|||++..... .
T Consensus 82 ~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH----~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------~ 150 (260)
T cd05611 82 GDCASLIKTLG-GLPEDWAKQYIAEVVLGVEDLH----QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------N 150 (260)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeEECCCCcEEEeecccceeccc------c
Confidence 99999998654 4789999999999999999999 67899999999999999999999999999875432 1
Q ss_pred eccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhh
Q 005040 588 TMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAF 667 (717)
Q Consensus 588 ~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (717)
....++..|+|||...+..++.++||||+|+++|||++|..||....... .......... .. . .
T Consensus 151 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~--~~--------~-----~ 214 (260)
T cd05611 151 KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA-VFDNILSRRI--NW--------P-----E 214 (260)
T ss_pred ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhccc--CC--------C-----C
Confidence 23357889999999888889999999999999999999999996532211 0011000000 00 0 0
Q ss_pred hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 005040 668 SDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLR 703 (717)
Q Consensus 668 ~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~ 703 (717)
.....++..+.+++.+||+.+|++||++.++.+.|.
T Consensus 215 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 215 EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKS 250 (260)
T ss_pred cccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence 011134567889999999999999998876655543
No 344
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=4.5e-34 Score=294.05 Aligned_cols=264 Identities=25% Similarity=0.277 Sum_probs=199.2
Q ss_pred CCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecC--CeeEEEEE
Q 005040 429 FNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNL--DFKALVLE 503 (717)
Q Consensus 429 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~--~~~~lv~e 503 (717)
|++.+.||+|+||.||+|... +++.+|+|++.... ......+.+|+++++.++|||++++++++.+. +..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567889999999999999976 58899999997653 33345688899999999999999999999887 88999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 504 FMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 504 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
|++ ++|.+++......+++..+..++.|+++|++||| ..+++|+||+|+||++++++.++|+|||++........
T Consensus 81 ~~~-~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH----~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~ 155 (287)
T cd07840 81 YMD-HDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLH----SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS 155 (287)
T ss_pred ccc-ccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH----HCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence 997 4999998876556899999999999999999999 67899999999999999999999999999987654321
Q ss_pred ceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhC---CCchhhhcc--
Q 005040 584 SVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESL---PHRLTEVVD-- 657 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-- 657 (717)
.......++..|+|||...+ ..++.++||||||+++|||++|+.||...... ........... ...+....+
T Consensus 156 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07840 156 -ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL-EQLEKIFELCGSPTDENWPGVSKLP 233 (287)
T ss_pred -ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCchhhccccccch
Confidence 11233456788999997654 45789999999999999999999998753221 11111111000 000000000
Q ss_pred --------ccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 658 --------ANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 658 --------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.......... ....++.++.+++.+|++.+|++||++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 234 WFENLKPKKPYKRRLREF-FKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhhhccccccchhHHHHH-hcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0000000000 00113567899999999999999999999875
No 345
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.4e-34 Score=315.27 Aligned_cols=270 Identities=18% Similarity=0.187 Sum_probs=189.8
Q ss_pred HhccCCccccccccccEEEEEEEec--CCCeEEEEE--------------echh---hHHHHHHHHHHHHHHHhcCCCce
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTLS--DGTNVAIKI--------------FNLQ---LERAFRSFDSECEILRNVRHRNL 485 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~--------------~~~~---~~~~~~~~~~e~~~l~~l~hpni 485 (717)
..++|++.+.||+|+||+||++..+ ++..++.|. +.+. .......+.+|+.++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 3578999999999999999998754 222222221 1111 12234567889999999999999
Q ss_pred eeEeeeeecCCeeEEEEEccCCCCHHHHHhhCC----CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeee
Q 005040 486 LKILGSCSNLDFKALVLEFMPNGSLEKWLYSHN----YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILL 561 (717)
Q Consensus 486 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill 561 (717)
+++++++.+.+..|+|+|++. ++|.+++.... .......+..++.|++.||.||| +.+|+||||||+|||+
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH----~~gIiHrDLKP~NILl 300 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH----DKKLIHRDIKLENIFL 300 (501)
T ss_pred CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEE
Confidence 999999999999999999985 58888876432 22345667789999999999999 6899999999999999
Q ss_pred CCCCcEEEeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCC-CCccccC-cch
Q 005040 562 DENMVAHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKP-TDEMFTG-EMS 639 (717)
Q Consensus 562 ~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p-~~~~~~~-~~~ 639 (717)
+.++.+||+|||++..+...... ......||..|+|||++.+..++.++|||||||++|||++|+.+ +...... ...
T Consensus 301 ~~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~ 379 (501)
T PHA03210 301 NCDGKIVLGDFGTAMPFEKEREA-FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQ 379 (501)
T ss_pred CCCCCEEEEeCCCceecCccccc-ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHH
Confidence 99999999999999876433221 12335689999999999999999999999999999999998854 4332111 112
Q ss_pred HHHHHHh------hCCCchhhhcc---cc-chh---hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 640 LRRWVKE------SLPHRLTEVVD---AN-LVR---EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 640 ~~~~~~~------~~~~~~~~~~~---~~-~~~---~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
+.+.+.. ..+.......+ .. +.. ..+........+.++.+++.+|++.||.+|||+.|+++
T Consensus 380 ~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 380 LLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 2221111 11111001100 00 000 00001111123455778899999999999999999986
No 346
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=5.4e-34 Score=288.19 Aligned_cols=246 Identities=28% Similarity=0.341 Sum_probs=201.6
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
+|++.+.||+|+||.||++... +++.+|+|.+.... ......+.+|+++++.++||||+++.+++.+....++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4788899999999999999865 78899999987543 33446678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCC
Q 005040 505 MPNGSLEKWLYSH---NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEG 581 (717)
Q Consensus 505 ~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 581 (717)
+++++|.+++... ...+++..++.++.|+++||+||| +.+++|+||+|+||+++.++.+|++|||++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh----~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~ 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH----EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh----hCCcccCCCCcceEEEecCCcEEEeeccchhhhccC
Confidence 9999999998752 345899999999999999999999 689999999999999999999999999999876543
Q ss_pred CCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccch
Q 005040 582 EDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLV 661 (717)
Q Consensus 582 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (717)
......++..|+|||...+..++.++|+||+|+++|||++|+.||..... ......+... ...
T Consensus 157 ----~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--~~~~~~~~~~---~~~-------- 219 (256)
T cd08530 157 ----MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSM--QDLRYKVQRG---KYP-------- 219 (256)
T ss_pred ----CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHhcC---CCC--------
Confidence 12234578899999999998999999999999999999999999975321 1111111110 000
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 662 REEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 662 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
. ....++.++.+++.+|++.+|++||++.|+++
T Consensus 220 ----~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 220 ----P--IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred ----C--CchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0 01134566889999999999999999999976
No 347
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=8.4e-34 Score=297.51 Aligned_cols=276 Identities=21% Similarity=0.285 Sum_probs=199.5
Q ss_pred cccccc--ccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCC
Q 005040 433 NLLGTG--GFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPN 507 (717)
Q Consensus 433 ~~lg~G--~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 507 (717)
..||+| +||+||+|+.. +|+.||+|++.... .+..+.+.+|+.+++.++||||+++++++...+..++|+||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 356666 89999999975 79999999986433 33456788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCce-
Q 005040 508 GSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSV- 585 (717)
Q Consensus 508 g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~- 585 (717)
+++.+++... ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.++++||+.+..........
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH----~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLH----QNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAK 159 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccc
Confidence 9999999864 234889999999999999999999 6789999999999999999999999998654332211110
Q ss_pred ----eeeccccCccccCCCccCC--CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhC--C-------C
Q 005040 586 ----IQTMTMATIGYMAPEYGSE--GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESL--P-------H 650 (717)
Q Consensus 586 ----~~~~~~~t~~y~aPE~~~~--~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~--~-------~ 650 (717)
......++..|+|||++.+ ..++.++||||+||++|||++|+.||........ ......... + .
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 238 (328)
T cd08226 160 VVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQM-LLQKLKGPPYSPLDITTFPC 238 (328)
T ss_pred ccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHH-HHHHhcCCCCCCccccccch
Confidence 0111234567999998866 3478999999999999999999999976432211 111110000 0 0
Q ss_pred chhhh--------------ccc-----cchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHHhHHhh
Q 005040 651 RLTEV--------------VDA-----NLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA--KLRKIKAKF 709 (717)
Q Consensus 651 ~~~~~--------------~~~-----~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~--~L~~~~~~~ 709 (717)
..... ... .........+....++.++.+++++||+.||++|||+.|+++ .++.+.++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~~~ 318 (328)
T cd08226 239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKEQT 318 (328)
T ss_pred hhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHHhc
Confidence 00000 000 000000011223356778999999999999999999999974 455555554
Q ss_pred ccch
Q 005040 710 LDDV 713 (717)
Q Consensus 710 ~~~~ 713 (717)
..++
T Consensus 319 ~~~~ 322 (328)
T cd08226 319 QGSI 322 (328)
T ss_pred ccch
Confidence 4443
No 348
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=6.8e-34 Score=293.74 Aligned_cols=265 Identities=23% Similarity=0.288 Sum_probs=195.6
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLE 503 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 503 (717)
++|+..+.||+|++|.||+|..+ +++.||+|.+.... ....+.+.+|++++++++||||+++++++.+....++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 47888999999999999999975 78999999886442 2233567889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCC-CCcEEEeeeccccccCCC
Q 005040 504 FMPNGSLEKWLYSHN-YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDE-NMVAHVSDFGISKLLGEG 581 (717)
Q Consensus 504 ~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfgl~~~~~~~ 581 (717)
|++ ++|.+++.... ...++..+..++.|++.||+||| +++++|+||+|+||+++. ++.+||+|||++......
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH----~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCH----SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP 156 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence 996 58888886543 33678888999999999999999 678999999999999985 567999999999765432
Q ss_pred CCceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhc----
Q 005040 582 EDSVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVV---- 656 (717)
Q Consensus 582 ~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 656 (717)
.. ......+++.|+|||++.+ ..++.++||||+|+++|+|+||+.||......+ ....... ..........
T Consensus 157 ~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~ 232 (294)
T PLN00009 157 VR--TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEID-ELFKIFR-ILGTPNEETWPGVT 232 (294)
T ss_pred cc--ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH-HhCCCChhhccccc
Confidence 11 1123356889999998765 457899999999999999999999996532211 1111110 0000000000
Q ss_pred ---ccc--chh--hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 657 ---DAN--LVR--EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 657 ---~~~--~~~--~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
+.. ... ...........+.++.+++.+|++.+|++||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 233 SLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred cchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 000 00000011223466889999999999999999999986
No 349
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=6.9e-34 Score=299.43 Aligned_cols=268 Identities=25% Similarity=0.318 Sum_probs=198.3
Q ss_pred HhccCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecC--Cee
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNV-RHRNLLKILGSCSNL--DFK 498 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~--~~~ 498 (717)
..++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|+.+++++ +||||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 4578999999999999999999975 68899999885421 22335567899999999 999999999988543 467
Q ss_pred EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeecccccc
Q 005040 499 ALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLL 578 (717)
Q Consensus 499 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 578 (717)
++||||++ ++|.+++... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 85 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH----~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~ 157 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIH----SGNVIHRDLKPSNILLNSDCRVKLADFGLARSL 157 (337)
T ss_pred EEEecccc-cCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEEcCCCcEEEeeccchhcc
Confidence 99999997 5999998765 5789999999999999999999 679999999999999999999999999999866
Q ss_pred CCCCCc---eeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCc---
Q 005040 579 GEGEDS---VIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHR--- 651 (717)
Q Consensus 579 ~~~~~~---~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--- 651 (717)
...... .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||....... ...+ +.......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~-~~~~-~~~~~~~~~~~ 235 (337)
T cd07852 158 SELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN-QLEK-IIEVIGPPSAE 235 (337)
T ss_pred ccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH-HHHH-HHHHhCCCCHH
Confidence 433221 11223457889999997654 567899999999999999999999996532211 1111 11100000
Q ss_pred -hh--------hhccccchhhhhhh-hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 652 -LT--------EVVDANLVREEQAF-SDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 652 -~~--------~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
+. ...+.......... .....++.++.+++.+||+.||++|||+.++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 236 DIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 00 00000000000000 0011245678999999999999999999999974
No 350
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-35 Score=274.00 Aligned_cols=250 Identities=22% Similarity=0.285 Sum_probs=197.1
Q ss_pred HhccCCcc-ccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhc-CCCceeeEeeeeec----CCe
Q 005040 425 ATDEFNEC-NLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNV-RHRNLLKILGSCSN----LDF 497 (717)
Q Consensus 425 ~~~~~~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~----~~~ 497 (717)
++++|.+. ++||-|-.|.|-.+..+ +|+.+|+|++... ...++|++..-.. .|||||.++++|+. ...
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 35566654 56899999999998865 8999999988633 3345677765555 69999999998854 345
Q ss_pred eEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeC---CCCcEEEeeec
Q 005040 498 KALVLEFMPNGSLEKWLYSHN-YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLD---ENMVAHVSDFG 573 (717)
Q Consensus 498 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfg 573 (717)
+.+|||.|+||.|.+.+++++ ..+.+.++..|+.||+.|+.||| +.+|.||||||+|+|.. .+..+||+|||
T Consensus 134 LLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH----~~nIAHRDlKpENLLyt~t~~na~lKLtDfG 209 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLH----SMNIAHRDLKPENLLYTTTSPNAPLKLTDFG 209 (400)
T ss_pred eEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHH----hcchhhccCChhheeeecCCCCcceEecccc
Confidence 679999999999999999664 45899999999999999999999 78899999999999997 45679999999
Q ss_pred cccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchh
Q 005040 574 ISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLT 653 (717)
Q Consensus 574 l~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 653 (717)
+|+.-.+ ...-...+-|+.|.|||++....|+..+|+||+||++|-|++|.+||-.+.... +.
T Consensus 210 FAK~t~~---~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a--------------is 272 (400)
T KOG0604|consen 210 FAKETQE---PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA--------------IS 272 (400)
T ss_pred cccccCC---CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc--------------CC
Confidence 9986543 222345678999999999999999999999999999999999999996643211 00
Q ss_pred hhccccchhhhhhh--hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 654 EVVDANLVREEQAF--SDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 654 ~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.-...++...+..+ +++...+++..++|+.+|+.+|++|.|+.|++.
T Consensus 273 pgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 273 PGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred hhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 11111111111122 345567888999999999999999999999875
No 351
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=9.4e-34 Score=295.61 Aligned_cols=264 Identities=22% Similarity=0.223 Sum_probs=193.8
Q ss_pred ccccccccccEEEEEEEecCCCeEEEEEechh--hHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCCC
Q 005040 431 ECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQ--LERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPNG 508 (717)
Q Consensus 431 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 508 (717)
+.+.+|.|+++.||++.. +++.||+|++... .....+.+.+|+++++.++||||+++++++.+.+..+++|||+++|
T Consensus 6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~ 84 (314)
T cd08216 6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG 84 (314)
T ss_pred hhHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence 334455555555555554 7999999998754 2445567899999999999999999999999999999999999999
Q ss_pred CHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc---
Q 005040 509 SLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS--- 584 (717)
Q Consensus 509 ~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~--- 584 (717)
+|.+++... ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+|++|||.+..+......
T Consensus 85 ~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH----~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~ 160 (314)
T cd08216 85 SCEDLLKTHFPEGLPELAIAFILKDVLNALDYIH----SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRV 160 (314)
T ss_pred CHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCcceEEEecCCceEEecCccceeeccccccccc
Confidence 999999854 345889999999999999999999 678999999999999999999999999988755322211
Q ss_pred --eeeeccccCccccCCCccCC--CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCC----------
Q 005040 585 --VIQTMTMATIGYMAPEYGSE--GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPH---------- 650 (717)
Q Consensus 585 --~~~~~~~~t~~y~aPE~~~~--~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---------- 650 (717)
.......++..|+|||++.+ ..++.++|||||||++|||++|+.||............ .....+.
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 239 (314)
T cd08216 161 VHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEK-VRGTVPCLLDKSTYPLY 239 (314)
T ss_pred cccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-HhccCccccccCchhhh
Confidence 11122346788999998765 45889999999999999999999999754322211111 1100000
Q ss_pred --chhh----hccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 651 --RLTE----VVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 651 --~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
.... ..+.. ...............++.+++.+||..||++|||++++++.
T Consensus 240 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 240 EDSMSQSRSSNEHPN-NRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred cCCcCcccccccccc-hhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 0000 00000 00111112223445678999999999999999999999863
No 352
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.9e-33 Score=283.80 Aligned_cols=247 Identities=27% Similarity=0.386 Sum_probs=202.0
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhhH--HHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLE--RAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
+|+..+.||+|++|.||+|... +++.||+|.+..... ...+.+.+|++++++++|||++++++++.+....++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4778899999999999999865 688999999876543 4557789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
+++++|.+++... ..+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++|+|||.+.........
T Consensus 81 ~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 155 (254)
T cd06627 81 AENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLH----EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD 155 (254)
T ss_pred CCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHh----hCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc
Confidence 9999999999876 45899999999999999999999 689999999999999999999999999999876543321
Q ss_pred eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhh
Q 005040 585 VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREE 664 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (717)
.....++..|+|||...+..++.++||||+|+++|+|++|+.||..... ....|.... ... ..+
T Consensus 156 --~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~---~~~~~~~~~--~~~-----~~~---- 219 (254)
T cd06627 156 --DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP---MAALFRIVQ--DDH-----PPL---- 219 (254)
T ss_pred --ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH---HHHHHHHhc--cCC-----CCC----
Confidence 2334578899999998888899999999999999999999999864221 111111100 000 000
Q ss_pred hhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 665 QAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 665 ~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
....+..+.+++.+|+..+|++||++.|++.
T Consensus 220 -----~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 220 -----PEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred -----CCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 0122456789999999999999999999874
No 353
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=1.3e-33 Score=293.30 Aligned_cols=248 Identities=25% Similarity=0.317 Sum_probs=197.0
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechh---hHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQ---LERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
..|+..+.||+|+||.||+|... +++.||+|.+... .....+++.+|+++++.++|||++++.+++.+....++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 44777789999999999999975 6888999988642 2334466788999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
||+. |++.+++......+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++|+|||++......
T Consensus 95 e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH----~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~- 168 (308)
T cd06634 95 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH----SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA- 168 (308)
T ss_pred EccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHhEEECCCCcEEECCcccceeecCc-
Confidence 9996 6888888766666899999999999999999999 678999999999999999999999999998765432
Q ss_pred CceeeeccccCccccCCCccC---CCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhcccc
Q 005040 583 DSVIQTMTMATIGYMAPEYGS---EGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDAN 659 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~---~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (717)
....++..|+|||.+. ...++.++|||||||++|||++|+.||...... .....+.....+ .
T Consensus 169 -----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~~~~~~---------~ 233 (308)
T cd06634 169 -----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYHIAQNESP---------A 233 (308)
T ss_pred -----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH-HHHHHHhhcCCC---------C
Confidence 2235788999999763 456888999999999999999999998652111 111111110000 0
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 005040 660 LVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLR 703 (717)
Q Consensus 660 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~ 703 (717)
.....++..+.+++.+||+.+|++||++.++++.--
T Consensus 234 --------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 234 --------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred --------cCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcc
Confidence 001134456889999999999999999999887533
No 354
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=7.4e-34 Score=292.89 Aligned_cols=259 Identities=21% Similarity=0.218 Sum_probs=185.8
Q ss_pred hccCCccccccccccEEEEEEEecC----CCeEEEEEechhhHHH-----------HHHHHHHHHHHHhcCCCceeeEee
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLSD----GTNVAIKIFNLQLERA-----------FRSFDSECEILRNVRHRNLLKILG 490 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~hpniv~~~~ 490 (717)
.++|.+.+.||+|+||.||+|...+ +..+|+|+........ ......+...+..+.|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 3689999999999999999999753 4566777543221110 011223344556678999999999
Q ss_pred eeecCC----eeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCc
Q 005040 491 SCSNLD----FKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMV 566 (717)
Q Consensus 491 ~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~ 566 (717)
++.... ..++++|++. .++.+.+.... ..++..+..++.|++.||+||| +.+|+||||||+||+++.++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH----~~~iiHrDiKp~Nill~~~~~ 164 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLV-ENTKEIFKRIK-CKNKKLIKNIMKDMLTTLEYIH----EHGISHGDIKPENIMVDGNNR 164 (294)
T ss_pred eeeEecCCceEEEEEEehhc-cCHHHHHHhhc-cCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCc
Confidence 765433 4478888874 46777666432 3578888999999999999999 678999999999999999999
Q ss_pred EEEeeeccccccCCCCCc-----eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHH
Q 005040 567 AHVSDFGISKLLGEGEDS-----VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLR 641 (717)
Q Consensus 567 ~kl~Dfgl~~~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~ 641 (717)
++|+|||+++.+...... .......||+.|+|||+..+..++.++|||||||++|||++|+.||....... ...
T Consensus 165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~-~~~ 243 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNG-NLI 243 (294)
T ss_pred EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccch-HHH
Confidence 999999999876432211 11123468999999999999999999999999999999999999997642211 111
Q ss_pred HHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 005040 642 RWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKL 702 (717)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L 702 (717)
..... +.. ..+.... .....++..+.+++..|++.+|++||+++++++.+
T Consensus 244 ~~~~~-------~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 244 HAAKC-------DFI-KRLHEGK---IKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHhHH-------HHH-HHhhhhh---hccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 11100 000 0000000 01123456788999999999999999999999876
No 355
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=4.1e-33 Score=285.10 Aligned_cols=241 Identities=21% Similarity=0.290 Sum_probs=185.4
Q ss_pred cccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHH---HHHHhcCCCceeeEeeeeecCCeeEEEEEccC
Q 005040 434 LLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSEC---EILRNVRHRNLLKILGSCSNLDFKALVLEFMP 506 (717)
Q Consensus 434 ~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~---~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 506 (717)
.||+|+||.||+|... +++.||+|.+.... ......+..|. +.++...||+|+.+.+++.+.+..++||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999864 68899999886532 11112233343 34445579999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCcee
Q 005040 507 NGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVI 586 (717)
Q Consensus 507 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~ 586 (717)
+|+|.+++.... .+++..+..++.|+++|+.||| +.+|+||||||+||+++.++.++|+|||++.......
T Consensus 81 g~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH----~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~---- 151 (278)
T cd05606 81 GGDLHYHLSQHG-VFSEAEMRFYAAEIILGLEHMH----NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---- 151 (278)
T ss_pred CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC----
Confidence 999999887654 5899999999999999999999 6789999999999999999999999999987653221
Q ss_pred eeccccCccccCCCccCCC-CcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhh
Q 005040 587 QTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQ 665 (717)
Q Consensus 587 ~~~~~~t~~y~aPE~~~~~-~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (717)
.....|+..|+|||+..++ .++.++||||+|+++|||++|+.||................. ....+
T Consensus 152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~----- 218 (278)
T cd05606 152 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT--------MAVEL----- 218 (278)
T ss_pred CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhc--------cCCCC-----
Confidence 1234689999999988754 689999999999999999999999976322111110000000 00000
Q ss_pred hhhhhHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 005040 666 AFSDKMDCLFSIMDLALDCCMDTPHKRI-----HMTDAAA 700 (717)
Q Consensus 666 ~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~ev~~ 700 (717)
+..++.++.+++.+|+..+|++|| ++.++++
T Consensus 219 ----~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 219 ----PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred ----CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 112345688999999999999999 9999875
No 356
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=2.3e-33 Score=292.01 Aligned_cols=244 Identities=27% Similarity=0.324 Sum_probs=194.2
Q ss_pred CCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 429 FNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 429 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
|...+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++|||++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 555678999999999999865 78899999986432 23446788899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
+. |++.+++......+++.++..++.|++.|+.||| +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus 103 ~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH----~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~---- 173 (313)
T cd06633 103 CL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH----SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP---- 173 (313)
T ss_pred CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCChhhEEECCCCCEEEeecCCCcccCC----
Confidence 95 6888888776666899999999999999999999 67899999999999999999999999998864322
Q ss_pred eeeeccccCccccCCCccC---CCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccch
Q 005040 585 VIQTMTMATIGYMAPEYGS---EGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLV 661 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~---~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (717)
.....++..|+|||++. .+.++.++||||||+++|||++|..||..... ............ ...
T Consensus 174 --~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~--~~~~~~~~~~~~---~~~------ 240 (313)
T cd06633 174 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--MSALYHIAQNDS---PTL------ 240 (313)
T ss_pred --CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHhcCC---CCC------
Confidence 12345788999999873 46688999999999999999999999865321 111111111000 000
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 662 REEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 662 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
....++..+.+++.+||+.+|.+||++.+++..
T Consensus 241 -------~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 241 -------QSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred -------CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011233457899999999999999999999863
No 357
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=9.8e-34 Score=298.05 Aligned_cols=271 Identities=24% Similarity=0.260 Sum_probs=200.5
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecC-----Ce
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNL-----DF 497 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~-----~~ 497 (717)
..+|.+.+.||+|+||+||+|... +++.||+|.+.... ......+.+|+.+++.++||||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 467899999999999999999865 78999999886432 22345667899999999999999999987543 35
Q ss_pred eEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccc
Q 005040 498 KALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKL 577 (717)
Q Consensus 498 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 577 (717)
.|+|+||+. ++|.+++...+ .+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++..
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH----~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 157 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQ-TLSDDHCQYFLYQLLRGLKYIH----SANVLHRDLKPSNLLLNANCDLKICDFGLART 157 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHH----hCCEecCCCCHHHEEEcCCCCEEECcCccccc
Confidence 799999995 69999887654 4899999999999999999999 67899999999999999999999999999987
Q ss_pred cCCCCCceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhh---CCCchh
Q 005040 578 LGEGEDSVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKES---LPHRLT 653 (717)
Q Consensus 578 ~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~---~~~~~~ 653 (717)
..... .......++..|+|||.... ..++.++||||||+++|+|++|+.||..... ........... .+....
T Consensus 158 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~ 234 (337)
T cd07858 158 TSEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDY-VHQLKLITELLGSPSEEDLG 234 (337)
T ss_pred cCCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCCh-HHHHHHHHHHhCCCChHHhh
Confidence 64332 11223457889999997654 5689999999999999999999999965321 11111111000 000000
Q ss_pred hhccccchh--------hhhh-hhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHHh
Q 005040 654 EVVDANLVR--------EEQA-FSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK--LRKI 705 (717)
Q Consensus 654 ~~~~~~~~~--------~~~~-~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~--L~~~ 705 (717)
...+..... .... .....+++.++.+++.+||+.+|++|||++|+++. ++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 235 FIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred hcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 000000000 0000 00112456778999999999999999999999977 6554
No 358
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.5e-33 Score=294.96 Aligned_cols=267 Identities=24% Similarity=0.308 Sum_probs=198.7
Q ss_pred HHHHhccCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeec-CCe
Q 005040 422 IRRATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSN-LDF 497 (717)
Q Consensus 422 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~-~~~ 497 (717)
+..++++|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++.+++.. ...
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 3456789999999999999999999865 89999999875432 2234667789999999999999999998865 567
Q ss_pred eEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccc
Q 005040 498 KALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKL 577 (717)
Q Consensus 498 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 577 (717)
.++|+||+ +++|.+++.... +++..+..++.|+++||.||| +.+++||||+|+||+++.++.++|+|||.+..
T Consensus 85 ~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~ql~~aL~~LH----~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~ 157 (328)
T cd07856 85 IYFVTELL-GTDLHRLLTSRP--LEKQFIQYFLYQILRGLKYVH----SAGVVHRDLKPSNILINENCDLKICDFGLARI 157 (328)
T ss_pred EEEEeehh-ccCHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEeECCCCCEEeCccccccc
Confidence 89999998 569998887543 788888899999999999999 67899999999999999999999999999875
Q ss_pred cCCCCCceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhh--CCCchh-
Q 005040 578 LGEGEDSVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKES--LPHRLT- 653 (717)
Q Consensus 578 ~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~--~~~~~~- 653 (717)
..... ....++..|+|||.+.+ ..++.++||||||+++|||++|+.||..... ......+.... .++++.
T Consensus 158 ~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~ 231 (328)
T cd07856 158 QDPQM-----TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDH-VNQFSIITDLLGTPPDDVIN 231 (328)
T ss_pred cCCCc-----CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHH
Confidence 43211 22356888999998765 5689999999999999999999999965322 11111111100 000000
Q ss_pred hhcccc-------chhh-h-hhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 654 EVVDAN-------LVRE-E-QAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 654 ~~~~~~-------~~~~-~-~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
...+.. +... . +.......++.++.++|.+|++.+|++||++.+++..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 232 TICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred hccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000 0000 0 0000011245678999999999999999999998765
No 359
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=3.2e-33 Score=287.76 Aligned_cols=261 Identities=25% Similarity=0.298 Sum_probs=196.2
Q ss_pred CCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhc---CCCceeeEeeeeecCCe-----
Q 005040 429 FNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNV---RHRNLLKILGSCSNLDF----- 497 (717)
Q Consensus 429 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~hpniv~~~~~~~~~~~----- 497 (717)
|++.+.||+|+||.||+|+.+ +++.||+|++.... ......+.+|+.+++++ +|||++++++++.+.+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567789999999999999986 58999999986432 22234566788777766 59999999999987776
Q ss_pred eEEEEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeecccc
Q 005040 498 KALVLEFMPNGSLEKWLYSHN-YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISK 576 (717)
Q Consensus 498 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 576 (717)
.+++|||+. ++|.+++.... ..+++..+..++.|+++||.||| +.+++|+||+|+||+++.++.++|+|||++.
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH----~~~i~h~~l~~~nili~~~~~~~l~dfg~~~ 155 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLH----SHRIVHRDLKPQNILVTSDGQVKIADFGLAR 155 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeeccCChhhEEEccCCCEEEeccCcce
Confidence 899999997 48999887643 35899999999999999999999 6789999999999999999999999999998
Q ss_pred ccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCC-Cchh--
Q 005040 577 LLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLP-HRLT-- 653 (717)
Q Consensus 577 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~-- 653 (717)
.+...... ....++..|+|||+..+..++.++|+||||+++|||++|+.||..... .....++...... ....
T Consensus 156 ~~~~~~~~---~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07838 156 IYSFEMAL---TSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE-ADQLDKIFDVIGLPSEEEWP 231 (287)
T ss_pred eccCCccc---ccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh-HHHHHHHHHHcCCCChHhcC
Confidence 76433211 223468889999999988999999999999999999999999875322 2222222221110 0000
Q ss_pred -------hhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 654 -------EVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 654 -------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
........... .....+.+..+.+++.+||+.||++||++.|++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 232 RNVSLPRSSFPSYTPRSF--KSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CCcccchhhcccccccch--hhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 00000000000 0111234567889999999999999999999874
No 360
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=4.6e-33 Score=282.70 Aligned_cols=250 Identities=23% Similarity=0.272 Sum_probs=196.3
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechh-----hHHHHHHHHHHHHHHHhcCCCceeeEeeeeecC--Cee
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQ-----LERAFRSFDSECEILRNVRHRNLLKILGSCSNL--DFK 498 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~--~~~ 498 (717)
.+|++.+.||+|+||.||+|... +++.||+|.+... ..+....+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 47889999999999999999865 6899999987532 133456788999999999999999999998664 467
Q ss_pred EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeecccccc
Q 005040 499 ALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLL 578 (717)
Q Consensus 499 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 578 (717)
++|+||+++++|.+++..... +++..+..++.|++.|+.||| +.+++|+||||+||+++.++.++|+|||+++..
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~-l~~~~~~~~~~~i~~al~~LH----~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 156 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGA-LTENVTRRYTRQILQGVSYLH----SNMIVHRDIKGANILRDSAGNVKLGDFGASKRI 156 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH----hCCEecCCCCHHHEEEcCCCCEEECcccccccc
Confidence 899999999999999986543 789999999999999999999 678999999999999999999999999999865
Q ss_pred CCCCC-ceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhcc
Q 005040 579 GEGED-SVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVD 657 (717)
Q Consensus 579 ~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (717)
..... ........++..|+|||+..+..++.++|+||||+++|||++|+.||...... ....+.. .....
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~----~~~~~---- 227 (264)
T cd06653 157 QTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM-AAIFKIA----TQPTK---- 227 (264)
T ss_pred ccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH-HHHHHHH----cCCCC----
Confidence 32111 11112345788999999998888999999999999999999999999653111 1111100 00000
Q ss_pred ccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 658 ANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
+. .+...+.++.+++.+|+. +|..||++.+++.
T Consensus 228 ~~---------~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 228 PM---------LPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred CC---------CCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 00 011344668899999999 5799999998764
No 361
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=2.1e-33 Score=289.11 Aligned_cols=255 Identities=25% Similarity=0.282 Sum_probs=199.1
Q ss_pred cCCccccccccccEEEEEEEe----cCCCeEEEEEechhh----HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCCee
Q 005040 428 EFNECNLLGTGGFGSVYKGTL----SDGTNVAIKIFNLQL----ERAFRSFDSECEILRNV-RHRNLLKILGSCSNLDFK 498 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~ 498 (717)
+|++.+.||+|+||.||+++. .+++.||||+++... ....+.+..|+++++++ +||||+++.+++......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 477888999999999999974 257889999987542 22345678899999999 599999999999999999
Q ss_pred EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeecccccc
Q 005040 499 ALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLL 578 (717)
Q Consensus 499 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 578 (717)
++||||+++|+|.+++.... .+++..+..++.|+++||.||| +.+++||||+|+||+++.++.++|+|||++...
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lH----~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 155 (288)
T cd05583 81 HLILDYVNGGELFTHLYQRE-HFTESEVRVYIAEIVLALDHLH----QLGIIYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (288)
T ss_pred EEEEecCCCCcHHHHHhhcC-CcCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHeEECCCCCEEEEECcccccc
Confidence 99999999999999987653 4789999999999999999999 678999999999999999999999999998765
Q ss_pred CCCCCceeeeccccCccccCCCccCCCC--cCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhc
Q 005040 579 GEGEDSVIQTMTMATIGYMAPEYGSEGI--VSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVV 656 (717)
Q Consensus 579 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~--~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (717)
...... ......++..|+|||...+.. .+.++||||||+++|||++|..||..... ...............
T Consensus 156 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~----- 228 (288)
T cd05583 156 LAEEEE-RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGE-QNSQSEISRRILKSK----- 228 (288)
T ss_pred cccccc-ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcc-cchHHHHHHHHHccC-----
Confidence 433221 122345788999999876654 78899999999999999999999854211 111111111110000
Q ss_pred cccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 005040 657 DANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRK 704 (717)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~ 704 (717)
. +....++..+.+++.+||+.||++|||+.++.+.|+.
T Consensus 229 -~---------~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 229 -P---------PFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred -C---------CCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 0 0111234567899999999999999999988887764
No 362
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=3.8e-33 Score=294.30 Aligned_cols=270 Identities=22% Similarity=0.277 Sum_probs=199.2
Q ss_pred HHHHHHHhccCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecC
Q 005040 419 YLDIRRATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNL 495 (717)
Q Consensus 419 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~ 495 (717)
-.++..++++|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++...
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~ 88 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 88 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence 3456677899999999999999999999864 78999999986532 22345677899999999999999999987542
Q ss_pred ------CeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEE
Q 005040 496 ------DFKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHV 569 (717)
Q Consensus 496 ------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl 569 (717)
...+++++++ +++|.+++... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||
T Consensus 89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~dlkp~NIll~~~~~~kl 161 (345)
T cd07877 89 RSLEEFNDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKI 161 (345)
T ss_pred ccccccccEEEEehhc-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCChHHEEEcCCCCEEE
Confidence 3467888887 78999888754 3899999999999999999999 678999999999999999999999
Q ss_pred eeeccccccCCCCCceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhC
Q 005040 570 SDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESL 648 (717)
Q Consensus 570 ~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 648 (717)
+|||++...... .....++..|+|||...+ ..++.++||||||+++|||++|+.||...... ...........
T Consensus 162 ~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~ 235 (345)
T cd07877 162 LDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVG 235 (345)
T ss_pred eccccccccccc-----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhC
Confidence 999998765322 123457889999998765 56889999999999999999999998653211 11111111110
Q ss_pred --CCchhhhccccchhhh----h-----hhhh-hHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 649 --PHRLTEVVDANLVREE----Q-----AFSD-KMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 649 --~~~~~~~~~~~~~~~~----~-----~~~~-~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
+......+........ + .+.. ....+.++.+++.+|++.||.+||++.+++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 236 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred CCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 0000000000000000 0 0000 00234568899999999999999999998864
No 363
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=2.3e-33 Score=287.68 Aligned_cols=249 Identities=27% Similarity=0.369 Sum_probs=200.9
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcC-CCceeeEeeeeecCCeeEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVR-HRNLLKILGSCSNLDFKALV 501 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-hpniv~~~~~~~~~~~~~lv 501 (717)
++|...+.||+|+||.||+|... +++.||+|++.... ....+.+..|++++++++ ||||+++++++.+.+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36888999999999999999975 79999999987642 233466788999999998 99999999999999999999
Q ss_pred EEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCC
Q 005040 502 LEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEG 581 (717)
Q Consensus 502 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 581 (717)
|||+++++|.+++...+ .+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++++|||++......
T Consensus 81 ~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh----~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~ 155 (280)
T cd05581 81 LEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLH----SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPN 155 (280)
T ss_pred EcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCCHHHeEECCCCCEEecCCccccccCCc
Confidence 99999999999998764 4899999999999999999999 678999999999999999999999999998866433
Q ss_pred CCc------------------eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHH
Q 005040 582 EDS------------------VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRW 643 (717)
Q Consensus 582 ~~~------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~ 643 (717)
... .......++..|+|||......++.++|+||+|++++++++|+.||..... ....+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~ 233 (280)
T cd05581 156 SSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE--YLTFQK 233 (280)
T ss_pred cccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH--HHHHHH
Confidence 211 112233578899999998888899999999999999999999999875321 111111
Q ss_pred HHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCH----HHHHH
Q 005040 644 VKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHM----TDAAA 700 (717)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~----~ev~~ 700 (717)
... . .. ..+...+..+.+++.+||+.+|.+||++ .|+++
T Consensus 234 ~~~---~------~~---------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 234 ILK---L------EY---------SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HHh---c------CC---------CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 000 0 00 0011224567899999999999999999 66654
No 364
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=2.2e-33 Score=294.91 Aligned_cols=271 Identities=25% Similarity=0.283 Sum_probs=203.8
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCC-----eeE
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLD-----FKA 499 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~-----~~~ 499 (717)
+|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++.+++.... ..|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4788899999999999999975 58999999887543 334467888999999999999999999987765 789
Q ss_pred EEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccC
Q 005040 500 LVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLG 579 (717)
Q Consensus 500 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 579 (717)
+||||++ ++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++|+|||++....
T Consensus 81 lv~e~~~-~~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~LH----~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYLH----SANVIHRDLKPSNILVNSNCDLKICDFGLARGVD 154 (330)
T ss_pred EEecchh-hhHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEcccCceEeec
Confidence 9999997 58999987654 6899999999999999999999 6899999999999999999999999999998765
Q ss_pred CCCCc-eeeeccccCccccCCCccCCC-CcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCC----chh
Q 005040 580 EGEDS-VIQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPH----RLT 653 (717)
Q Consensus 580 ~~~~~-~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~----~~~ 653 (717)
..... .......++..|+|||++.+. .++.++|+||+|+++|+|++|+.||...... .....+...... ...
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~ 232 (330)
T cd07834 155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI--DQLNLIVEVLGTPSEEDLK 232 (330)
T ss_pred ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHH--HHHHHHHHhcCCCChhHhh
Confidence 43210 112234578899999998877 7899999999999999999999999764221 111111111000 000
Q ss_pred hhccccchh---------hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHHhH
Q 005040 654 EVVDANLVR---------EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK--LRKIK 706 (717)
Q Consensus 654 ~~~~~~~~~---------~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~--L~~~~ 706 (717)
......... ...-.......+.++.+++.+||+.+|++||++.++++. ++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~ 296 (330)
T cd07834 233 FITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLH 296 (330)
T ss_pred hccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhc
Confidence 000000000 000000011245678899999999999999999999974 55543
No 365
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=4e-33 Score=286.42 Aligned_cols=262 Identities=23% Similarity=0.256 Sum_probs=194.8
Q ss_pred CCccccccccccEEEEEEEec-CCCeEEEEEechhhH-HHHHHHHHHHHHHHhcC-CCceeeEeeeeecCCeeEEEEEcc
Q 005040 429 FNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLE-RAFRSFDSECEILRNVR-HRNLLKILGSCSNLDFKALVLEFM 505 (717)
Q Consensus 429 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-hpniv~~~~~~~~~~~~~lv~e~~ 505 (717)
|++.+.||+|+||.||+|... +++.||+|.+..... .......+|+..+++++ |||++++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 567789999999999999976 588899998865432 12233456899999998 999999999999999999999999
Q ss_pred CCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 506 PNGSLEKWLYSHN-YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 506 ~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
+|+|.+++.... ..+++..+..++.|++.+|.||| +.+++|+||+|+||++++++.++|+|||.+........
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh----~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~- 154 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIH----KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP- 154 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCC-
Confidence 789999988654 46899999999999999999999 67899999999999999999999999999986643221
Q ss_pred eeeeccccCccccCCCccC-CCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCc----h------h
Q 005040 585 VIQTMTMATIGYMAPEYGS-EGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHR----L------T 653 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~~~-~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~----~------~ 653 (717)
.....++..|+|||+.. ...++.++|+||||+++|||++|+.||......+ .... ........ + .
T Consensus 155 --~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd07830 155 --YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEID-QLYK-ICSVLGTPTKQDWPEGYKLA 230 (283)
T ss_pred --cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHH-HHHH-HHHhcCCCChhhhhhHhhhh
Confidence 12345788999999764 4568999999999999999999999986532111 1110 00000000 0 0
Q ss_pred hhccccchhhhhh--hhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 654 EVVDANLVREEQA--FSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 654 ~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
...+..+...... .......+.++.+++.+||+.+|++|||++|++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 231 SKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred ccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 0000000000000 0000011456889999999999999999999875
No 366
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-35 Score=271.56 Aligned_cols=270 Identities=20% Similarity=0.284 Sum_probs=199.9
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeec--------C
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSN--------L 495 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~--------~ 495 (717)
..|+...+||+|.||.||+|+.+ +|+.||+|+.-... ........+|+++|+.++|+|++.+++.|.. .
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 45666789999999999999865 68889998654322 2223456789999999999999999998743 2
Q ss_pred CeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccc
Q 005040 496 DFKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGIS 575 (717)
Q Consensus 496 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 575 (717)
...|+||++|+. +|...+.+....++..++.++++++..||.|+| ...|+|||+|+.|||++.+|.+||+|||++
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iH----r~kilHRDmKaaNvLIt~dgilklADFGla 171 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIH----RNKILHRDMKAANVLITKDGILKLADFGLA 171 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHH----HhhHHhhcccHhhEEEcCCceEEeeccccc
Confidence 357999999986 999999887777999999999999999999999 678999999999999999999999999999
Q ss_pred cccCCCCC--ceeeeccccCccccCCCccC-CCCcCcccchhhHHHHHHHHHhCCCCCCccccCcc--hHHHHHHhhCCC
Q 005040 576 KLLGEGED--SVIQTMTMATIGYMAPEYGS-EGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEM--SLRRWVKESLPH 650 (717)
Q Consensus 576 ~~~~~~~~--~~~~~~~~~t~~y~aPE~~~-~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~--~~~~~~~~~~~~ 650 (717)
+.+..... ...++..+.|.+|++||.+. ...|+++.|||+.||++.||+||.+-+.+..+... .++.......++
T Consensus 172 r~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tke 251 (376)
T KOG0669|consen 172 RAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKE 251 (376)
T ss_pred cceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcc
Confidence 76643322 22345567799999999654 47799999999999999999999998876432211 112222222222
Q ss_pred chhhhccccchhhh-------hhhhhhHHH------HHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 651 RLTEVVDANLVREE-------QAFSDKMDC------LFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 651 ~~~~~~~~~~~~~~-------~~~~~~~~~------~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
.+..+..-.+.... .+.....+. ..+..+++..++..||.+|+++++++..
T Consensus 252 vWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 252 VWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred cCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 22222211111000 001111111 2367899999999999999999998753
No 367
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=3.2e-33 Score=294.24 Aligned_cols=265 Identities=22% Similarity=0.253 Sum_probs=195.4
Q ss_pred ccCCc-cccccccccEEEEEEEec-CCCeEEEEEechhhHHH--------------HHHHHHHHHHHHhcCCCceeeEee
Q 005040 427 DEFNE-CNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERA--------------FRSFDSECEILRNVRHRNLLKILG 490 (717)
Q Consensus 427 ~~~~~-~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--------------~~~~~~e~~~l~~l~hpniv~~~~ 490 (717)
++|.. .+.||+|+||.||+|... +++.||+|++....... ...+.+|++++++++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 45654 467999999999999865 78999999886442111 124678999999999999999999
Q ss_pred eeecCCeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEe
Q 005040 491 SCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVS 570 (717)
Q Consensus 491 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~ 570 (717)
++...+..++||||+. |+|.+++.... .+++.....++.|++.||+||| +.+++||||+|+||+++.++.++|+
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH----~~~i~H~dl~~~nill~~~~~~kl~ 161 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRKI-RLTESQVKCILLQILNGLNVLH----KWYFMHRDLSPANIFINSKGICKIA 161 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCeecccccHHHeEECCCCCEEEC
Confidence 9999999999999996 69999987543 4899999999999999999999 6789999999999999999999999
Q ss_pred eeccccccCCCCC------------ceeeeccccCccccCCCccCCC-CcCcccchhhHHHHHHHHHhCCCCCCccccCc
Q 005040 571 DFGISKLLGEGED------------SVIQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTEKKPTDEMFTGE 637 (717)
Q Consensus 571 Dfgl~~~~~~~~~------------~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~ 637 (717)
|||.+........ ........++..|+|||++.+. .++.++||||+|+++|||++|+.||......
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~- 240 (335)
T PTZ00024 162 DFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI- 240 (335)
T ss_pred CccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-
Confidence 9999986641110 1111223468889999987664 4789999999999999999999999753221
Q ss_pred chHHHHHHhhC-CC--chhhhc--------cccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 638 MSLRRWVKESL-PH--RLTEVV--------DANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 638 ~~~~~~~~~~~-~~--~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
..+........ +. .+.... ........ ......++.++.+++.+|++.+|++||+++|++.
T Consensus 241 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 241 DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDL--KTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccH--HHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 11111111000 00 000000 00000000 0011133567889999999999999999999986
No 368
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=7.5e-33 Score=285.33 Aligned_cols=251 Identities=25% Similarity=0.282 Sum_probs=194.7
Q ss_pred cCCccccccccccEEEEEEEe----cCCCeEEEEEechhh----HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCCee
Q 005040 428 EFNECNLLGTGGFGSVYKGTL----SDGTNVAIKIFNLQL----ERAFRSFDSECEILRNV-RHRNLLKILGSCSNLDFK 498 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~ 498 (717)
+|++.+.||+|+||.||.|.. .+|+.||+|++.... ....+.+..|+++++++ +||||+.+++++......
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 377889999999999999986 368899999987543 22345678899999999 599999999999999999
Q ss_pred EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeecccccc
Q 005040 499 ALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLL 578 (717)
Q Consensus 499 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 578 (717)
++||||+++++|.+++.... .+++..+..++.|+++||.||| +.+++||||+|+||+++.++.+||+|||++...
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH----~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 155 (290)
T cd05613 81 HLILDYINGGELFTHLSQRE-RFKEQEVQIYSGEIVLALEHLH----KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF 155 (290)
T ss_pred EEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHeEECCCCCEEEeeCccceec
Confidence 99999999999999998654 4788999999999999999999 688999999999999999999999999998765
Q ss_pred CCCCCceeeeccccCccccCCCccCC--CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhc
Q 005040 579 GEGEDSVIQTMTMATIGYMAPEYGSE--GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVV 656 (717)
Q Consensus 579 ~~~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (717)
...... ......|+..|+|||+..+ ..++.++||||||+++|+|++|+.||..... ......+........
T Consensus 156 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-~~~~~~~~~~~~~~~----- 228 (290)
T cd05613 156 HEDEVE-RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE-KNSQAEISRRILKSE----- 228 (290)
T ss_pred cccccc-ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc-cccHHHHHHHhhccC-----
Confidence 432211 1123457889999998765 3468899999999999999999999864211 111112111110000
Q ss_pred cccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 005040 657 DANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRI-----HMTDAAA 700 (717)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rp-----t~~ev~~ 700 (717)
+ +.+..++..+.+++.+|++.||++|| ++.+++.
T Consensus 229 -~---------~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 229 -P---------PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred -C---------CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 0 00112345678999999999999997 5666654
No 369
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.7e-33 Score=293.42 Aligned_cols=267 Identities=23% Similarity=0.235 Sum_probs=195.5
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhhH--HHHHHHHHHHHHHHhcCCCceeeEeeeeecC-------
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLE--RAFRSFDSECEILRNVRHRNLLKILGSCSNL------- 495 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~------- 495 (717)
.++|++.+.||+|+||.||+|..+ +++.||+|++..... .....+.+|+++++.++||||+++++++.+.
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 478999999999999999999975 789999998864331 1224567899999999999999999987443
Q ss_pred -CeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeecc
Q 005040 496 -DFKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGI 574 (717)
Q Consensus 496 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 574 (717)
...++|+||+. +++...+......+++..+..++.|+++||+||| +.+++|+||||+||++++++.++|+|||+
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH----~~~i~H~dl~p~nil~~~~~~~~l~dfg~ 161 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLENPSVKLTESQIKCYMLQLLEGINYLH----ENHILHRDIKAANILIDNQGILKIADFGL 161 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEECCCCCEEECcCcc
Confidence 34699999996 4788888766666999999999999999999999 67899999999999999999999999999
Q ss_pred ccccCCCCCce---------eeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHH
Q 005040 575 SKLLGEGEDSV---------IQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWV 644 (717)
Q Consensus 575 ~~~~~~~~~~~---------~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~ 644 (717)
+.......... ......+++.|+|||...+ ..++.++||||||+++|||++|+.||.+.... .......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~-~~~~~~~ 240 (311)
T cd07866 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI-DQLHLIF 240 (311)
T ss_pred chhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH
Confidence 98654322111 1122346788999997654 45889999999999999999999998653221 1111111
Q ss_pred Hhh-C--CCch------hh----hccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 645 KES-L--PHRL------TE----VVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 645 ~~~-~--~~~~------~~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
... . +... .. .......... ..........+.+++.+|+..||++|||+.|++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 241 KLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTL--EERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHhCCCChhhchhhhhcccccccccCCCCCccH--HHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 100 0 0000 00 0000000000 0011123356889999999999999999999875
No 370
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=4.8e-33 Score=293.27 Aligned_cols=264 Identities=23% Similarity=0.273 Sum_probs=196.5
Q ss_pred HHhccCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCC----
Q 005040 424 RATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLD---- 496 (717)
Q Consensus 424 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~---- 496 (717)
...++|++.+.||+|+||.||+|... +++.||||++.... ......+.+|+++++.++||||+++++++....
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 34678999999999999999999864 78999999885432 223456788999999999999999999886543
Q ss_pred --eeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeecc
Q 005040 497 --FKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGI 574 (717)
Q Consensus 497 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 574 (717)
..++||||+ +++|.+++... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.++++|||+
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~al~~LH----~~gi~H~dlkp~Nill~~~~~~kl~dfg~ 164 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKHE--KLSEDRIQFLVYQMLKGLKYIH----AAGIIHRDLKPGNLAVNEDCELKILDFGL 164 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 458999999 77999888753 4899999999999999999999 67899999999999999999999999999
Q ss_pred ccccCCCCCceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCC--Cc
Q 005040 575 SKLLGEGEDSVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLP--HR 651 (717)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~ 651 (717)
+....... ....+++.|+|||.+.+ ..++.++|+||+|+++|++++|+.||...... ............ ..
T Consensus 165 ~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~ 238 (343)
T cd07880 165 ARQTDSEM-----TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHL-DQLMEIMKVTGTPSKE 238 (343)
T ss_pred ccccccCc-----cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHH
Confidence 98653321 22356889999998765 45889999999999999999999999753211 111111110000 00
Q ss_pred hhhhcccc--------chhhh-hhh-hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 652 LTEVVDAN--------LVREE-QAF-SDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 652 ~~~~~~~~--------~~~~~-~~~-~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
+...+... +.... ... .....++.++.+++.+|++.||++|||+.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 239 FVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000000 00000 000 001234566889999999999999999999983
No 371
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=4.3e-33 Score=293.70 Aligned_cols=268 Identities=22% Similarity=0.282 Sum_probs=195.6
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecC------C
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNL------D 496 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~------~ 496 (717)
..+|...+.||+|+||.||+|... +++.||+|++.... ......+.+|+++++.++||||+++++++... .
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 378999999999999999999965 78999999886432 22335678899999999999999999988654 3
Q ss_pred eeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeecccc
Q 005040 497 FKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISK 576 (717)
Q Consensus 497 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 576 (717)
..++|+||+. .+|.++.. ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.++|+|||++.
T Consensus 94 ~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH----~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~ 165 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMG---HPLSEDKVQYLVYQMLCGLKYIH----SAGIIHRDLKPGNLAVNEDCELKILDFGLAR 165 (342)
T ss_pred eEEEEecccc-cCHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEEeeCCCCc
Confidence 4689999996 47777653 24889999999999999999999 6789999999999999999999999999987
Q ss_pred ccCCCCCceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhh-CCC-chh
Q 005040 577 LLGEGEDSVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKES-LPH-RLT 653 (717)
Q Consensus 577 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~-~~~ 653 (717)
...... ....++..|+|||++.+ ..++.++|||||||++|||++|+.||...... ..+....... .+. ...
T Consensus 166 ~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~ 239 (342)
T cd07879 166 HADAEM-----TGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGVPGPEFV 239 (342)
T ss_pred CCCCCC-----CCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHH
Confidence 653221 23356888999998766 46889999999999999999999999753211 1111111100 000 000
Q ss_pred hhccc-cch---hhhhhh------hhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHHhHH
Q 005040 654 EVVDA-NLV---REEQAF------SDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK--LRKIKA 707 (717)
Q Consensus 654 ~~~~~-~~~---~~~~~~------~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~--L~~~~~ 707 (717)
+.... ... ...+.. ......+.++.+++.+||+.||++||++++++.. ++++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 240 QKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred HHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 00000 000 000000 0001234568899999999999999999999854 665543
No 372
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-33 Score=244.94 Aligned_cols=266 Identities=23% Similarity=0.273 Sum_probs=200.0
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLE 503 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 503 (717)
.+|+..++||+|.||+||+|+.+ +++.||+|.++... +.......+|+-+++.++|.|||++++....+...-+|+|
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe 81 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHH
Confidence 35667789999999999999965 68889999886553 3334567889999999999999999999998899999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 504 FMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 504 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
||. .+|..|...-...++.+.+.+++.|+++||.++| ++.+.|||+||.|.++..+|+.|++|||+++-.+-..
T Consensus 82 ~cd-qdlkkyfdslng~~d~~~~rsfmlqllrgl~fch----shnvlhrdlkpqnllin~ngelkladfglarafgipv- 155 (292)
T KOG0662|consen 82 FCD-QDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCH----SHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV- 155 (292)
T ss_pred Hhh-HHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhh----hhhhhhccCCcceEEeccCCcEEecccchhhhcCCce-
Confidence 995 4999999988778999999999999999999999 7889999999999999999999999999999775332
Q ss_pred ceeeeccccCccccCCCccCCC-CcCcccchhhHHHHHHHHHhCCCC-CCccccCcchHHHHHHhhC---CCchh---hh
Q 005040 584 SVIQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTEKKP-TDEMFTGEMSLRRWVKESL---PHRLT---EV 655 (717)
Q Consensus 584 ~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dvws~G~il~el~tg~~p-~~~~~~~~~~~~~~~~~~~---~~~~~---~~ 655 (717)
.-.+..+.|.+|.+|.++.+. -|+...|+||.||++.|+.....| |.+.. -..++.+..+... ++.+. ..
T Consensus 156 -rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~d-vddqlkrif~~lg~p~ed~wps~t~l 233 (292)
T KOG0662|consen 156 -RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND-VDDQLKRIFRLLGTPTEDQWPSMTKL 233 (292)
T ss_pred -EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCc-HHHHHHHHHHHhCCCccccCCccccC
Confidence 223455789999999988775 489999999999999999985544 54422 2223333332211 11122 12
Q ss_pred ccccchhhhhhhhhhHH----HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 656 VDANLVREEQAFSDKMD----CLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 656 ~~~~~~~~~~~~~~~~~----~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
-|......++......+ ....-.+++++.+.-+|..|.+++++++
T Consensus 234 pdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 234 PDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 22111111111111111 1122457788888889999999998875
No 373
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=2.4e-33 Score=295.52 Aligned_cols=265 Identities=20% Similarity=0.273 Sum_probs=194.5
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecC----------
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNL---------- 495 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~---------- 495 (717)
.+|+..+.||+|+||.||+|... +++.||+|.+........+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 68899999999999999999875 7899999998765555567788899999999999999999876543
Q ss_pred ----CeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeC-CCCcEEEe
Q 005040 496 ----DFKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLD-ENMVAHVS 570 (717)
Q Consensus 496 ----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~-~~~~~kl~ 570 (717)
...++||||++ ++|.+++... .+++..+..++.|+++||.||| +.+|+||||||+||+++ .++.++++
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH----~~givH~dikp~Nili~~~~~~~kl~ 157 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQG--PLSEEHARLFMYQLLRGLKYIH----SANVLHRDLKPANVFINTEDLVLKIG 157 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEEEcCCCceEEEC
Confidence 35789999997 5999888654 3889999999999999999999 67899999999999998 45678999
Q ss_pred eeccccccCCCCCce-eeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhC
Q 005040 571 DFGISKLLGEGEDSV-IQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESL 648 (717)
Q Consensus 571 Dfgl~~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 648 (717)
|||.+.......... ......++..|+|||+... ..++.++|||||||++|||++|+.||......+ ........ .
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~-~~~~~~~~-~ 235 (342)
T cd07854 158 DFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELE-QMQLILES-V 235 (342)
T ss_pred CcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHh-c
Confidence 999997654321111 1123357889999997544 568889999999999999999999996532211 11111111 0
Q ss_pred CCc----hhhh---ccccch----hhhhh-hhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 649 PHR----LTEV---VDANLV----REEQA-FSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 649 ~~~----~~~~---~~~~~~----~~~~~-~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
+.. .... ...... ..... .......+.++.+++.+|+..||++|||+.|++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 236 PVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred CCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 000 0000 000000 00000 0001124466889999999999999999999984
No 374
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=4e-33 Score=286.20 Aligned_cols=263 Identities=27% Similarity=0.286 Sum_probs=198.9
Q ss_pred CCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEcc
Q 005040 429 FNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFM 505 (717)
Q Consensus 429 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 505 (717)
|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+..|+++++.++|||++++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 566788999999999999976 69999999987653 233456778999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCce
Q 005040 506 PNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSV 585 (717)
Q Consensus 506 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~ 585 (717)
+ ++|.+++......+++..+..++.|++.||.||| +.+|+||||+|+||++++++.++|+|||.+........
T Consensus 81 ~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH----~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-- 153 (282)
T cd07829 81 D-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCH----SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR-- 153 (282)
T ss_pred C-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc--
Confidence 7 5999999876556899999999999999999999 67899999999999999999999999999886643221
Q ss_pred eeeccccCccccCCCccCCC-CcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCC----chhhh-----
Q 005040 586 IQTMTMATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPH----RLTEV----- 655 (717)
Q Consensus 586 ~~~~~~~t~~y~aPE~~~~~-~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~----- 655 (717)
......++..|+|||++.+. .++.++||||||+++||+++|+.||...... ..+.+ +...... .+...
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07829 154 TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI-DQLFK-IFQILGTPTEESWPGVTKLPD 231 (282)
T ss_pred ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH-HHHHH-HHHHhCCCcHHHHHhhccccc
Confidence 12233457789999987766 7899999999999999999999998653211 11111 1110000 00000
Q ss_pred ccccchhhhhh--hhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 656 VDANLVREEQA--FSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 656 ~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.+..+...... .......+.++.+++.+||..+|++||++.+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 232 YKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 00000000000 0001122467899999999999999999999875
No 375
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=2.4e-33 Score=295.68 Aligned_cols=262 Identities=24% Similarity=0.290 Sum_probs=197.0
Q ss_pred HhccCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCe----
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDF---- 497 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~---- 497 (717)
..++|+..+.||+|+||.||+|... +++.||+|++.... ......+.+|+.++++++|||++++.+++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4578999999999999999999975 68899999886432 2234567789999999999999999998766554
Q ss_pred --eEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccc
Q 005040 498 --KALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGIS 575 (717)
Q Consensus 498 --~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~ 575 (717)
.++|+||+ +++|.+++... .+++..+..++.|+++||.||| +.+|+||||||+||+++.++.++|+|||++
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~ql~~aL~~LH----~~gi~H~dlkp~Nill~~~~~~kL~dfg~~ 165 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKCQ--KLSDDHIQFLVYQILRGLKYIH----SAGIIHRDLKPSNIAVNEDCELKILDFGLA 165 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeEECCCCCEEEcccccc
Confidence 89999999 67999998763 4899999999999999999999 678999999999999999999999999999
Q ss_pred cccCCCCCceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhh
Q 005040 576 KLLGEGEDSVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTE 654 (717)
Q Consensus 576 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (717)
...... .....++..|+|||...+ ..++.++||||+|+++|||++|+.||...... ..+..... .......+
T Consensus 166 ~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~-~~~~~i~~-~~~~~~~~ 238 (343)
T cd07851 166 RHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI-DQLKRIMN-LVGTPDEE 238 (343)
T ss_pred cccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHH-hcCCCCHH
Confidence 865432 123357888999998754 46789999999999999999999999653221 11111111 11100000
Q ss_pred hc------------cccchhhhhhhh-hhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 655 VV------------DANLVREEQAFS-DKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 655 ~~------------~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.. ..........+. .....+.++.+++.+|+..+|++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 239 LLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 00 000000000000 01123567899999999999999999999876
No 376
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-34 Score=277.25 Aligned_cols=245 Identities=24% Similarity=0.267 Sum_probs=199.7
Q ss_pred HHHhccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCCe
Q 005040 423 RRATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNV-RHRNLLKILGSCSNLDF 497 (717)
Q Consensus 423 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~ 497 (717)
+....+|..+.+||+|+||.|-+|..+ +.+.+|||++++.. ....+--+.|-++|+.. +-|.++++..+|+.-+.
T Consensus 345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDR 424 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDR 424 (683)
T ss_pred ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhh
Confidence 444568999999999999999999876 56779999998765 33334456688888866 57899999999999999
Q ss_pred eEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccc
Q 005040 498 KALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKL 577 (717)
Q Consensus 498 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 577 (717)
+|+||||+.||+|--.+++-++ +.+..+.-++..||-||-+|| +++|++||||..||++|.+|++||+|||+++.
T Consensus 425 LyFVMEyvnGGDLMyhiQQ~Gk-FKEp~AvFYAaEiaigLFFLh----~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKE 499 (683)
T KOG0696|consen 425 LYFVMEYVNGGDLMYHIQQVGK-FKEPVAVFYAAEIAIGLFFLH----SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 499 (683)
T ss_pred eeeEEEEecCchhhhHHHHhcc-cCCchhhhhhHHHHHHhhhhh----cCCeeeeeccccceEeccCCceEeeecccccc
Confidence 9999999999999988887665 667777889999999999999 79999999999999999999999999999975
Q ss_pred cCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhcc
Q 005040 578 LGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVD 657 (717)
Q Consensus 578 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (717)
---.. ......+|||.|+|||.+...+|+.++|+|||||+||||+.|++||++.. +..+-+.+.++
T Consensus 500 ni~~~--~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeD--E~elF~aI~eh---------- 565 (683)
T KOG0696|consen 500 NIFDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED--EDELFQAIMEH---------- 565 (683)
T ss_pred cccCC--cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCC--HHHHHHHHHHc----------
Confidence 32222 22345689999999999999999999999999999999999999998732 22222222211
Q ss_pred ccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCC
Q 005040 658 ANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIH 694 (717)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt 694 (717)
+...+...+.++.++....+...|.+|..
T Consensus 566 --------nvsyPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 566 --------NVSYPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred --------cCcCcccccHHHHHHHHHHhhcCCccccC
Confidence 12233355677889999999999999974
No 377
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-34 Score=287.00 Aligned_cols=241 Identities=24% Similarity=0.362 Sum_probs=196.1
Q ss_pred ccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCCCC
Q 005040 433 NLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPNGS 509 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 509 (717)
+.||.|.||+||-|+++ +|+.||||++.+-. .......++|+.+|++++||.||.+-..|+..+..|+|||.+. |+
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~-GD 648 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH-GD 648 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc-ch
Confidence 68999999999999975 89999999997654 3334678899999999999999999999999999999999995 46
Q ss_pred HHHHH-hhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCC---CcEEEeeeccccccCCCCCce
Q 005040 510 LEKWL-YSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDEN---MVAHVSDFGISKLLGEGEDSV 585 (717)
Q Consensus 510 L~~~l-~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfgl~~~~~~~~~~~ 585 (717)
..+++ .....++++....-++.||+.||+||| -++|||+||||+|||+.+. .++||||||+|+.+++....
T Consensus 649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH----~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFR- 723 (888)
T KOG4236|consen 649 MLEMILSSEKGRLPERITKFLVTQILVALRYLH----FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFR- 723 (888)
T ss_pred HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhh----hcceeeccCCchheeeccCCCCCceeeccccceeecchhhhh-
Confidence 66555 455667999999999999999999999 5789999999999999743 47999999999999765433
Q ss_pred eeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhh
Q 005040 586 IQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQ 665 (717)
Q Consensus 586 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (717)
...+||+.|+|||++..+.|...-|+||.||++|--++|..||.+.. ++.+.+.. ..+.-.
T Consensus 724 --rsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdE----dIndQIQN-----------AaFMyP-- 784 (888)
T KOG4236|consen 724 --RSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDE----DINDQIQN-----------AAFMYP-- 784 (888)
T ss_pred --hhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCcc----chhHHhhc-----------cccccC--
Confidence 35679999999999999999999999999999999999999997532 22222211 111000
Q ss_pred hhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 005040 666 AFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAA 699 (717)
Q Consensus 666 ~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~ 699 (717)
-..+.+.+.+++++|...+++.=++|-|..+.+
T Consensus 785 -p~PW~eis~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 785 -PNPWSEISPEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred -CCchhhcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence 012345567788999999999989998887654
No 378
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-34 Score=281.07 Aligned_cols=257 Identities=28% Similarity=0.418 Sum_probs=199.1
Q ss_pred hccCCccccccccccEEEEEEEe-cCCCeEEEEEechhh-------HHHHHHHHHHHHHHHhcCCCceeeEeeeee-cCC
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTL-SDGTNVAIKIFNLQL-------ERAFRSFDSECEILRNVRHRNLLKILGSCS-NLD 496 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-------~~~~~~~~~e~~~l~~l~hpniv~~~~~~~-~~~ 496 (717)
.++|-..++||+|+|+.||+|.+ ...+.||||+-.... ....+...+|.++.+.|.||.||++|+++. +.+
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd 541 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD 541 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence 46788889999999999999984 478889999764332 112345678999999999999999999985 456
Q ss_pred eeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeC---CCCcEEEeeec
Q 005040 497 FKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLD---ENMVAHVSDFG 573 (717)
Q Consensus 497 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfg 573 (717)
..|-|.|||+|.+|.-|++.+.. +++..+..|++||+.||.||.+. +.+|+|-||||.|||+- .-|.+||+|||
T Consensus 542 sFCTVLEYceGNDLDFYLKQhkl-mSEKEARSIiMQiVnAL~YLNEi--kpPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 542 SFCTVLEYCEGNDLDFYLKQHKL-MSEKEARSIIMQIVNALKYLNEI--KPPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred cceeeeeecCCCchhHHHHhhhh-hhHHHHHHHHHHHHHHHHHHhcc--CCCeeeeccCCccEEEecCcccceeEeeecc
Confidence 67899999999999999987654 89999999999999999999976 57899999999999995 46789999999
Q ss_pred cccccCCCCCce-----eeeccccCccccCCCccC----CCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHH
Q 005040 574 ISKLLGEGEDSV-----IQTMTMATIGYMAPEYGS----EGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWV 644 (717)
Q Consensus 574 l~~~~~~~~~~~-----~~~~~~~t~~y~aPE~~~----~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~ 644 (717)
+++.+....+.. ..+...||.+|++||++- ....+.|+||||.|||+|+++.|+.||+...... +..
T Consensus 619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQ----dIL 694 (775)
T KOG1151|consen 619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQ----DIL 694 (775)
T ss_pred hhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHH----HHH
Confidence 999987554432 223457999999999643 2357889999999999999999999998642211 111
Q ss_pred HhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 005040 645 KESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAA 699 (717)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~ 699 (717)
... .++. .....++.....+.++.++|++|+++.-++|....++.
T Consensus 695 qeN------TIlk----AtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 695 QEN------TILK----ATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred hhh------chhc----ceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 110 0111 11112333334556788999999999999999887764
No 379
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.2e-32 Score=312.37 Aligned_cols=145 Identities=27% Similarity=0.433 Sum_probs=131.2
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
++|.+.+.||+|+||.||+|... +++.||+|++.... ......+..|+.+++.++||||+++++++......|+||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 67899999999999999999976 78999999987543 333467888999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeecccc
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISK 576 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 576 (717)
||+.+++|.+++...+ .+++..++.++.||+.||.||| ..+|+||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~~-~l~~~~~~~i~~qil~aL~yLH----~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIYG-YFDEEMAVKYISEVALALDYLH----RHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 9999999999998654 3788999999999999999999 6789999999999999999999999999986
No 380
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.5e-32 Score=288.45 Aligned_cols=266 Identities=23% Similarity=0.261 Sum_probs=191.4
Q ss_pred cCCccccccccccEEEEEEEec-C--CCeEEEEEechhh--HHHHHHHHHHHHHHHhc-CCCceeeEeeeeec----CCe
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-D--GTNVAIKIFNLQL--ERAFRSFDSECEILRNV-RHRNLLKILGSCSN----LDF 497 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~--~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~----~~~ 497 (717)
+|++.+.||+|+||.||++... + +..||+|++.... ....+.+.+|+++++++ +||||+++++.+.. ...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4778889999999999999975 4 7789999886432 22345678899999999 59999999986532 245
Q ss_pred eEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccc
Q 005040 498 KALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKL 577 (717)
Q Consensus 498 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 577 (717)
.++++||+. ++|.+++.... .+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++..
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH----~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~ 154 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSGQ-PLTDAHFQSFIYQILCGLKYIH----SANVLHRDLKPGNLLVNADCELKICDFGLARG 154 (332)
T ss_pred EEEEEeccc-CCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHeEEcCCCCEEeCcCCCcee
Confidence 789999985 69999987544 4899999999999999999999 67899999999999999999999999999986
Q ss_pred cCCCCCc--eeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhC-C-Cc-
Q 005040 578 LGEGEDS--VIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESL-P-HR- 651 (717)
Q Consensus 578 ~~~~~~~--~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~-~-~~- 651 (717)
....... .......|+..|+|||+..+ ..++.++||||+|+++|+|++|+.||...... ......+.... + ..
T Consensus 155 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~ 233 (332)
T cd07857 155 FSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV-DQLNQILQVLGTPDEET 233 (332)
T ss_pred cccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH-HHHHHHHHHhCCCCHHH
Confidence 6432211 11123468899999997655 56899999999999999999999998652211 11111110000 0 00
Q ss_pred hhhhcccc-------ch-hhhhhhh-hhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 652 LTEVVDAN-------LV-REEQAFS-DKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 652 ~~~~~~~~-------~~-~~~~~~~-~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.....++. .. .....+. .....+..+.+++.+|++.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 234 LSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000000 00 0000000 00112456889999999999999999999874
No 381
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=9e-33 Score=279.96 Aligned_cols=247 Identities=21% Similarity=0.236 Sum_probs=192.3
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh-----HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEE
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-----ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALV 501 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv 501 (717)
+|.+.+.||+|+||.||++... .+..+++|+++... ......+..|+.+++.++||||+++++++.+.+..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 4788899999999999999865 34556666654321 12234566789999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeecccccc
Q 005040 502 LEFMPNGSLEKWLYS---HNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLL 578 (717)
Q Consensus 502 ~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 578 (717)
|||+++++|.+++.. ....+++..+..++.|+++|+.||| +.+++|+||+|+||+++. +.++|+|||++...
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH----~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~ 155 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMH----QRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLL 155 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH----HcCccccCCChhheEeec-CCEeecccCceeec
Confidence 999999999998874 3456899999999999999999999 679999999999999975 56999999998766
Q ss_pred CCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccc
Q 005040 579 GEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDA 658 (717)
Q Consensus 579 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (717)
..... ......++..|+|||...+..++.++|+||||+++|+|++|..||..... ........... .+
T Consensus 156 ~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~-----~~ 223 (260)
T cd08222 156 MGSCD--LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF-----LSVVLRIVEGP-----TP 223 (260)
T ss_pred CCCcc--cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH-----HHHHHHHHcCC-----CC
Confidence 43222 12234578899999998888889999999999999999999999864211 11111110000 00
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 659 NLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
. .+..++.++.+++.+|++.+|++||++.|+++
T Consensus 224 ~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 224 S---------LPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred C---------CcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 0 01234567889999999999999999999976
No 382
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=3.7e-32 Score=273.74 Aligned_cols=236 Identities=28% Similarity=0.289 Sum_probs=192.0
Q ss_pred ccccccEEEEEEEec-CCCeEEEEEechhhH---HHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCCCCH
Q 005040 435 LGTGGFGSVYKGTLS-DGTNVAIKIFNLQLE---RAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPNGSL 510 (717)
Q Consensus 435 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L 510 (717)
||+|+||.||++... +++.+|+|++..... .....+..|++++++++||||+++++.+.+....++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999976 689999999876542 2456788899999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceeeecc
Q 005040 511 EKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQTMT 590 (717)
Q Consensus 511 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~ 590 (717)
.+++.... .+++..+..++.|+++|+.||| +.+++|+||+|+||+++.++.++|+|||++........ .....
T Consensus 81 ~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh----~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~ 153 (250)
T cd05123 81 FSHLSKEG-RFSEERARFYAAEIVLALEYLH----SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS--RTNTF 153 (250)
T ss_pred HHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCceecCCCcceEEEcCCCcEEEeecCcceecccCCC--cccCC
Confidence 99998764 3899999999999999999999 67899999999999999999999999999987643321 12344
Q ss_pred ccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhhh
Q 005040 591 MATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSDK 670 (717)
Q Consensus 591 ~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (717)
.++..|+|||...+...+.++|+||||+++||+++|+.||..... ....+.+.. .. . ..+
T Consensus 154 ~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--~~~~~~~~~---~~--------~-------~~~ 213 (250)
T cd05123 154 CGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR--KEIYEKILK---DP--------L-------RFP 213 (250)
T ss_pred cCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHhc---CC--------C-------CCC
Confidence 578899999998888889999999999999999999999965321 111111111 00 0 001
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHH
Q 005040 671 MDCLFSIMDLALDCCMDTPHKRIHMTD 697 (717)
Q Consensus 671 ~~~~~~l~~li~~cl~~~P~~Rpt~~e 697 (717)
...+.++.+++.+||..||++||++.+
T Consensus 214 ~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 214 EFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 112456789999999999999999954
No 383
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5e-33 Score=270.81 Aligned_cols=263 Identities=22% Similarity=0.272 Sum_probs=200.3
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcC-C-C----ceeeEeeeeecCCee
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVR-H-R----NLLKILGSCSNLDFK 498 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-p----niv~~~~~~~~~~~~ 498 (717)
+.+|.++..+|+|.||.|-.+.+. .+..||||+++.- ....+..+-|+++++++. + | -++.+.+||+-.++.
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 679999999999999999999865 5788999998744 344566677999999993 2 2 378888999999999
Q ss_pred EEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCC--------------
Q 005040 499 ALVLEFMPNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDE-------------- 563 (717)
Q Consensus 499 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~-------------- 563 (717)
++|+|.+ |.|+.+++.++ -.+++...+..|+.|++++++||| +.+++|-||||+|||+.+
T Consensus 167 Civfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh----~~kl~HTDLKPENILfvss~~~~~~~~k~~~~ 241 (415)
T KOG0671|consen 167 CIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLH----DLKLTHTDLKPENILFVSSEYFKTYNPKKKVC 241 (415)
T ss_pred EEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHH----hcceeecCCChheEEEeccceEEEeccCCccc
Confidence 9999998 56999999975 456899999999999999999999 688999999999999932
Q ss_pred ------CCcEEEeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCc
Q 005040 564 ------NMVAHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGE 637 (717)
Q Consensus 564 ------~~~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~ 637 (717)
+..++++|||.|+...+.. +..+.|..|+|||++.+-.++..+||||+||||+|++||..-|....+.+
T Consensus 242 ~~r~~ks~~I~vIDFGsAtf~~e~h-----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~E 316 (415)
T KOG0671|consen 242 FIRPLKSTAIKVIDFGSATFDHEHH-----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLE 316 (415)
T ss_pred eeccCCCcceEEEecCCcceeccCc-----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHH
Confidence 3468999999998765443 33457899999999999999999999999999999999999887643221
Q ss_pred -chHHHHHHhhCCCchh--------------------------hhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCC
Q 005040 638 -MSLRRWVKESLPHRLT--------------------------EVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPH 690 (717)
Q Consensus 638 -~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~ 690 (717)
..+.+-+-...|..+. .+.+.... .............++.+|+++|+..||.
T Consensus 317 HLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckp-l~~~~~~~d~e~~~LfDLl~~mL~fDP~ 395 (415)
T KOG0671|consen 317 HLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKP-LKKYMLQDDLEHVQLFDLLRRMLEFDPA 395 (415)
T ss_pred HHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCcc-HHHHhccCcHHHhHHHHHHHHHHccCcc
Confidence 1122222212221110 00110000 0001111123346699999999999999
Q ss_pred CCCCHHHHHH
Q 005040 691 KRIHMTDAAA 700 (717)
Q Consensus 691 ~Rpt~~ev~~ 700 (717)
+|+|+.|++.
T Consensus 396 ~RiTl~EAL~ 405 (415)
T KOG0671|consen 396 RRITLREALS 405 (415)
T ss_pred ccccHHHHhc
Confidence 9999999875
No 384
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-34 Score=267.83 Aligned_cols=252 Identities=25% Similarity=0.290 Sum_probs=191.3
Q ss_pred CCccccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCCeeEEEEEcc
Q 005040 429 FNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEILRNV-RHRNLLKILGSCSNLDFKALVLEFM 505 (717)
Q Consensus 429 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~ 505 (717)
.+....||.|+||+|++..++ .|+..|||++.... .....++..|.+...+- +.||||+++|.+..++...+.||.|
T Consensus 66 Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM 145 (361)
T KOG1006|consen 66 LQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM 145 (361)
T ss_pred HHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH
Confidence 344568999999999999876 89999999997654 24446677777765544 7999999999999899999999999
Q ss_pred CCCCHHHHHh----hCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCC
Q 005040 506 PNGSLEKWLY----SHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEG 581 (717)
Q Consensus 506 ~~g~L~~~l~----~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 581 (717)
. .++..+-. -....+++...-.|+.-.+.||.||-+ ...|+|||+||+|||+|..|.+||||||.+..+.
T Consensus 146 d-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~---~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv-- 219 (361)
T KOG1006|consen 146 D-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE---ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLV-- 219 (361)
T ss_pred h-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH---HhhhhhccCChhheEEecCCCEeeecccchHhHH--
Confidence 5 46654332 123458888888899999999999997 5579999999999999999999999999997763
Q ss_pred CCceeeeccccCccccCCCccCC--CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhcccc
Q 005040 582 EDSVIQTMTMATIGYMAPEYGSE--GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDAN 659 (717)
Q Consensus 582 ~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (717)
.+...+...|-..|||||.+.. ..|+.+|||||+|++|||+.||+.||.... +. -+.+.+.... |+.
T Consensus 220 -~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~-sv---feql~~Vv~g------dpp 288 (361)
T KOG1006|consen 220 -DSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD-SV---FEQLCQVVIG------DPP 288 (361)
T ss_pred -HHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH-HH---HHHHHHHHcC------CCC
Confidence 2344556678888999997654 458999999999999999999999987622 11 1111111110 111
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 660 LVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 660 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.... -....+++..+..+|-.|+.+|-.+||...++++
T Consensus 289 ~l~~---~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 289 ILLF---DKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred eecC---cccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 0000 0112346677899999999999999999998865
No 385
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=2.2e-35 Score=301.58 Aligned_cols=333 Identities=26% Similarity=0.372 Sum_probs=242.5
Q ss_pred CCCccccCCCCCcEEECCCCcceecCCcCCCCCCCCCEEEcccccccCccCCcccccccccccCccCCcEEeccCCCCcc
Q 005040 3 TIPNSITNATKLIGLDLGLNSFSGHIPNTFGNLRHLSVLSLMMNNLTTESSSADQWSFLSSLTNCRNLANLALASNPLGG 82 (717)
Q Consensus 3 ~iP~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ 82 (717)
.||++++.+.+|++|.+++|++. .+-..++.|+.|+.+++.+|+++... .|..+-.+..|+.||||+|+++
T Consensus 46 ~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N~LKnsG-------iP~diF~l~dLt~lDLShNqL~- 116 (1255)
T KOG0444|consen 46 QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRDNNLKNSG-------IPTDIFRLKDLTILDLSHNQLR- 116 (1255)
T ss_pred hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhhccccccCC-------CCchhcccccceeeecchhhhh-
Confidence 46777777777777777777776 45556777777777777777776533 2445667777888888888877
Q ss_pred cCCcchhccccccceeeecCCcceecCCccccCCCCCcEEEccCCCCcccCCccccccCCCCEEeccCCcccccCCcccc
Q 005040 83 ILPPLIGNFSASLQNIYAFECKLGGSIPKEIGNLRGLIVLSLGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPHDLC 162 (717)
Q Consensus 83 ~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~ 162 (717)
..|..+..- +++..|+|++|+|.++...-|-+|+.|-+||||+|++. .+|..+..|.+|++|.|++|.+...--..+.
T Consensus 117 EvP~~LE~A-Kn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLP 194 (1255)
T KOG0444|consen 117 EVPTNLEYA-KNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLP 194 (1255)
T ss_pred hcchhhhhh-cCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCc
Confidence 566666654 56777788888877655556777777778888888877 4566677777788888888777644333444
Q ss_pred CCCCCCEEeccCCcCc-ccCCccccCCCCCCeEEecCccccCCCChhhhcccCCCeEEccCCcCcccCCccccCCCCCCe
Q 005040 163 HLERLNILNLSGNKLS-GAIPQCLASLTSLRSLYLQSNKLSSSLPSSLWSLEYILRINLSSNSLKGTLPSNIQKLNVLID 241 (717)
Q Consensus 163 ~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 241 (717)
.|++|++|.+++.+=+ ..+|..+..+.+|+.+|||.|.+. .+|+.+..+++|+.|+||+|+|+ .+......+.+|+.
T Consensus 195 smtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEt 272 (1255)
T KOG0444|consen 195 SMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLET 272 (1255)
T ss_pred cchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhh
Confidence 5566666777665432 346777778888888888888888 77888888888888888888888 55556677778888
Q ss_pred EEccCCCCCCCCcccccCCcccccccccCccccC-CCCccccccCccceEeccCCCCCCCCcccccccccccEEEccCCc
Q 005040 242 LDLSRNQLSSDIPSTIGTLKNLETLSLAGNQFQG-PIPESVGNLISLESLDFSNNNLSGKIPKSLEALSHLKQFNVSHNR 320 (717)
Q Consensus 242 L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~L~~N~~~~~~~~~~~~l~~L~~L~l~~N~ 320 (717)
|+||.|+++ ..|.+++.+++|+.|.+.+|+++- -+|..++++.+|+.+..++|++. .+|..+..+..|+.|.|+.|.
T Consensus 273 LNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~Nr 350 (1255)
T KOG0444|consen 273 LNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNR 350 (1255)
T ss_pred hccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhcccccc
Confidence 888888888 588888888888888888888752 35777888888888888888887 778888888888888888888
Q ss_pred ccccccccccccccccccccCCccccCCCC
Q 005040 321 LEGEIPVKGSFKDFSAQSYFGNYALCGPPR 350 (717)
Q Consensus 321 l~~~~p~~~~~~~~~~~~~~~n~~~c~~~~ 350 (717)
+-..+...-.++.+..+.+-.|+.+.-||.
T Consensus 351 LiTLPeaIHlL~~l~vLDlreNpnLVMPPK 380 (1255)
T KOG0444|consen 351 LITLPEAIHLLPDLKVLDLRENPNLVMPPK 380 (1255)
T ss_pred eeechhhhhhcCCcceeeccCCcCccCCCC
Confidence 765444344455666666667776665554
No 386
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-32 Score=285.76 Aligned_cols=239 Identities=26% Similarity=0.293 Sum_probs=192.9
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCCeeEEEEE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNV-RHRNLLKILGSCSNLDFKALVLE 503 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e 503 (717)
+++|.....+|.|+|+.|-.+... +++..+||++.... .+..+|+.++... .||||+++.+.+.+..+.|+|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 456777778999999999888764 78899999997652 2234467666655 79999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeee-CCCCcEEEeeeccccccCCCC
Q 005040 504 FMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILL-DENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 504 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill-~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
.+.|+-+.+.+..... ....+..|+.+++.|+.||| +++|||||+||+|||+ ++.++++|+|||.++.....
T Consensus 397 ~l~g~ell~ri~~~~~--~~~e~~~w~~~lv~Av~~LH----~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~- 469 (612)
T KOG0603|consen 397 LLDGGELLRRIRSKPE--FCSEASQWAAELVSAVDYLH----EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS- 469 (612)
T ss_pred hccccHHHHHHHhcch--hHHHHHHHHHHHHHHHHHHH----hcCeeecCCChhheeecCCCCcEEEEEechhhhCchh-
Confidence 9999988887776543 22677889999999999999 6899999999999999 69999999999999877543
Q ss_pred CceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchh
Q 005040 583 DSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVR 662 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (717)
....+-|..|.|||++....|++++||||+|++||+|++|+.||.....+ ..+...+. ...
T Consensus 470 ----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-~ei~~~i~---~~~----------- 530 (612)
T KOG0603|consen 470 ----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-IEIHTRIQ---MPK----------- 530 (612)
T ss_pred ----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-HHHHHhhc---CCc-----------
Confidence 22335688999999999999999999999999999999999999764333 11111111 000
Q ss_pred hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 663 EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 663 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
+. ...+.++.+|+..||+.||.+||+|.++..
T Consensus 531 ----~s--~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 531 ----FS--ECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred ----cc--cccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 00 244567889999999999999999999865
No 387
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.98 E-value=4.1e-32 Score=270.70 Aligned_cols=221 Identities=19% Similarity=0.147 Sum_probs=176.5
Q ss_pred cccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCCCCHHHHHhh
Q 005040 438 GGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPNGSLEKWLYS 516 (717)
Q Consensus 438 G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 516 (717)
|.||.||++... +++.||+|++.... .+..|...+....||||+++++++.+.+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 899999999975 78999999987543 223345555566799999999999999999999999999999999976
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceeeeccccCccc
Q 005040 517 HNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQTMTMATIGY 596 (717)
Q Consensus 517 ~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y 596 (717)
.. .+++..+..++.|+++||.||| +.+++||||||+||+++.++.++++|||.+....... ....++..|
T Consensus 79 ~~-~l~~~~~~~~~~ql~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~-----~~~~~~~~y 148 (237)
T cd05576 79 FL-NIPEECVKRWAAEMVVALDALH----REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC-----DGEAVENMY 148 (237)
T ss_pred hc-CCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHEEEcCCCCEEEecccchhcccccc-----ccCCcCccc
Confidence 54 3899999999999999999999 6789999999999999999999999999876654321 223456779
Q ss_pred cCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHH
Q 005040 597 MAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFS 676 (717)
Q Consensus 597 ~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (717)
+|||...+..++.++||||+|+++|||++|+.|+...... ........+ +..++..
T Consensus 149 ~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~---------------~~~~~~~~~---------~~~~~~~ 204 (237)
T cd05576 149 CAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG---------------INTHTTLNI---------PEWVSEE 204 (237)
T ss_pred cCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh---------------cccccccCC---------cccCCHH
Confidence 9999998888999999999999999999999887532110 000000000 1123456
Q ss_pred HHHHHhhccCCCCCCCCCHHH
Q 005040 677 IMDLALDCCMDTPHKRIHMTD 697 (717)
Q Consensus 677 l~~li~~cl~~~P~~Rpt~~e 697 (717)
+.+++.+|++.||++||++.+
T Consensus 205 ~~~li~~~l~~dp~~R~~~~~ 225 (237)
T cd05576 205 ARSLLQQLLQFNPTERLGAGV 225 (237)
T ss_pred HHHHHHHHccCCHHHhcCCCc
Confidence 789999999999999999743
No 388
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.6e-33 Score=281.94 Aligned_cols=242 Identities=25% Similarity=0.336 Sum_probs=199.0
Q ss_pred ccCCccccccccccEEEEEEEecCCC-eEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLSDGT-NVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~~~~-~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
.+++.+..||-|+||.|-+++.+... .+|+|++++.. ..+.+.+..|-.+|.+.+.|.||++|-.|.+...+||.|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 45666778999999999999875433 48999887653 445567888999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE 582 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 582 (717)
|-|-||.++..++..+. ++..+..-++.-+++|++||| +++||+|||||+|.++|.+|.+||.|||+|+.++.+.
T Consensus 500 EaClGGElWTiLrdRg~-Fdd~tarF~~acv~EAfeYLH----~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~ 574 (732)
T KOG0614|consen 500 EACLGGELWTILRDRGS-FDDYTARFYVACVLEAFEYLH----RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR 574 (732)
T ss_pred HhhcCchhhhhhhhcCC-cccchhhhhHHHHHHHHHHHH----hcCceeccCChhheeeccCCceEEeehhhHHHhccCC
Confidence 99999999999998765 777888888999999999999 7899999999999999999999999999999987655
Q ss_pred CceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchh
Q 005040 583 DSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVR 662 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (717)
.+ -..+|||.|.|||.+..+..+.++|.||+|+++||+++|.+||.+..+ +.....+-. -+|.
T Consensus 575 KT---wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dp--mktYn~ILk--------Gid~---- 637 (732)
T KOG0614|consen 575 KT---WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDP--MKTYNLILK--------GIDK---- 637 (732)
T ss_pred ce---eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCch--HHHHHHHHh--------hhhh----
Confidence 43 456899999999999999999999999999999999999999976322 111111110 0110
Q ss_pred hhhhhhhhHHHHHHHHHHHhhccCCCCCCCCC
Q 005040 663 EEQAFSDKMDCLFSIMDLALDCCMDTPHKRIH 694 (717)
Q Consensus 663 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt 694 (717)
..-+....+...++|++.++.+|.+|..
T Consensus 638 ----i~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 638 ----IEFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred ----hhcccccchhHHHHHHHHHhcCcHhhhc
Confidence 0011233456789999999999999986
No 389
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.98 E-value=2.4e-32 Score=279.69 Aligned_cols=220 Identities=24% Similarity=0.387 Sum_probs=184.4
Q ss_pred CCCCHHHHHHHh---ccCCccccccccccEEEEEEEe-cCCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceee
Q 005040 415 RRTSYLDIRRAT---DEFNECNLLGTGGFGSVYKGTL-SDGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLK 487 (717)
Q Consensus 415 ~~~~~~~~~~~~---~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~ 487 (717)
....|..++++. .-|..++.||-|+||.|++++- ++...+|.|.+.+.. +.....+++|-.||+....+.||+
T Consensus 614 KESnYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVr 693 (1034)
T KOG0608|consen 614 KESNYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVR 693 (1034)
T ss_pred hhhhHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEE
Confidence 445677777775 4577788999999999999974 456678999987664 556677899999999999999999
Q ss_pred EeeeeecCCeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcE
Q 005040 488 ILGSCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVA 567 (717)
Q Consensus 488 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~ 567 (717)
+|..|.+.+.+|+||||++|||+-.+|.+-+- +++.-++-++..+..|+++.| ..|++||||||+|||||.+|++
T Consensus 694 LyySFQDkdnLYFVMdYIPGGDmMSLLIrmgI-FeE~LARFYIAEltcAiesVH----kmGFIHRDiKPDNILIDrdGHI 768 (1034)
T KOG0608|consen 694 LYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGI-FEEDLARFYIAELTCAIESVH----KMGFIHRDIKPDNILIDRDGHI 768 (1034)
T ss_pred EEEEeccCCceEEEEeccCCccHHHHHHHhcc-CHHHHHHHHHHHHHHHHHHHH----hccceecccCccceEEccCCce
Confidence 99999999999999999999999998887654 677777778889999999999 7899999999999999999999
Q ss_pred EEeeeccccc---------cCCCCCc-------------------------------eeeeccccCccccCCCccCCCCc
Q 005040 568 HVSDFGISKL---------LGEGEDS-------------------------------VIQTMTMATIGYMAPEYGSEGIV 607 (717)
Q Consensus 568 kl~Dfgl~~~---------~~~~~~~-------------------------------~~~~~~~~t~~y~aPE~~~~~~~ 607 (717)
||+|||++.- +..++-. ......+||+.|+|||++....|
T Consensus 769 KLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~ 848 (1034)
T KOG0608|consen 769 KLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGY 848 (1034)
T ss_pred eeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCc
Confidence 9999999763 2211100 01122479999999999999999
Q ss_pred CcccchhhHHHHHHHHHhCCCCCCccccCcch
Q 005040 608 STKCDVYSYGVLLMETFTEKKPTDEMFTGEMS 639 (717)
Q Consensus 608 ~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~ 639 (717)
+..+|+||.|||||||+.|+.||-+..+++.+
T Consensus 849 ~q~cdwws~gvil~em~~g~~pf~~~tp~~tq 880 (1034)
T KOG0608|consen 849 TQLCDWWSVGVILYEMLVGQPPFLADTPGETQ 880 (1034)
T ss_pred cccchhhHhhHHHHHHhhCCCCccCCCCCcce
Confidence 99999999999999999999999887666543
No 390
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.5e-32 Score=261.44 Aligned_cols=248 Identities=19% Similarity=0.256 Sum_probs=199.5
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCCeeEE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNV-RHRNLLKILGSCSNLDFKAL 500 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~l 500 (717)
.++|+..+.||+|.|+.|-.++++ +.+.+|+|++++.. .+...-...|..+..+. +||.+|.+..+|+....+++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 478999999999999999999975 77889999998765 34445566788888877 79999999999999999999
Q ss_pred EEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCC
Q 005040 501 VLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGE 580 (717)
Q Consensus 501 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 580 (717)
|.||++||+|--++++.++ ++++.+.-+...|+-||.||| ++||+.||+|..|||+|..|++|++|||+++.--.
T Consensus 329 vieyv~ggdlmfhmqrqrk-lpeeharfys~ei~lal~flh----~rgiiyrdlkldnvlldaeghikltdygmcke~l~ 403 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEICLALNFLH----ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG 403 (593)
T ss_pred EEEEecCcceeeehhhhhc-CcHHHhhhhhHHHHHHHHHHh----hcCeeeeeccccceEEccCCceeecccchhhcCCC
Confidence 9999999999877776554 899999999999999999999 78999999999999999999999999999875332
Q ss_pred CCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCc--cccCcchHHHHHHhhCCCchhhhccc
Q 005040 581 GEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDE--MFTGEMSLRRWVKESLPHRLTEVVDA 658 (717)
Q Consensus 581 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (717)
+.+ ..+..+|||.|.|||.+.+..|+...|+|++||+++||+.|+.||+. +...+....++.-+.+-+ +
T Consensus 404 ~gd--~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvile-------k 474 (593)
T KOG0695|consen 404 PGD--TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILE-------K 474 (593)
T ss_pred CCc--ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhh-------h
Confidence 222 23567899999999999999999999999999999999999999975 333333333333322111 1
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCC
Q 005040 659 NLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIH 694 (717)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt 694 (717)
.+ -.+...+..+..+++.-+.+||.+|..
T Consensus 475 qi-------riprslsvkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 475 QI-------RIPRSLSVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred cc-------cccceeehhhHHHHHHhhcCCcHHhcC
Confidence 11 011122344567888999999999873
No 391
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-31 Score=283.80 Aligned_cols=254 Identities=24% Similarity=0.324 Sum_probs=204.5
Q ss_pred HHHhccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhc-CCCceeeEeeeee-----cC
Q 005040 423 RRATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNV-RHRNLLKILGSCS-----NL 495 (717)
Q Consensus 423 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~-----~~ 495 (717)
..-+..|++...||.|.+|.||+++.. +++..|+|+.....+. .+.+..|.++++.. .|||++.++|++. .+
T Consensus 15 pdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~ 93 (953)
T KOG0587|consen 15 PDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-EEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNG 93 (953)
T ss_pred CCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc-cHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCC
Confidence 334567888999999999999999854 8899999998766543 35677899999988 6999999999984 35
Q ss_pred CeeEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeecc
Q 005040 496 DFKALVLEFMPNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGI 574 (717)
Q Consensus 496 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 574 (717)
+.+.+|||||.+|+..++++.- +..+.|..+..|+..++.|+.+|| ...++|||+|-.|||++.++.||++|||.
T Consensus 94 DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH----~nkviHRDikG~NiLLT~e~~VKLvDFGv 169 (953)
T KOG0587|consen 94 DQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLH----NNKVIHRDIKGQNVLLTENAEVKLVDFGV 169 (953)
T ss_pred CeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHh----hcceeeecccCceEEEeccCcEEEeeeee
Confidence 6889999999999999999843 556899999999999999999999 67799999999999999999999999999
Q ss_pred ccccCCCCCceeeeccccCccccCCCccCC-----CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCC
Q 005040 575 SKLLGEGEDSVIQTMTMATIGYMAPEYGSE-----GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLP 649 (717)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-----~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 649 (717)
+..+... ........|||.|||||++.. ..|+..+|+||+|++..||-.|.+|+.++.+-...+ .++
T Consensus 170 SaQldsT--~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF------~Ip 241 (953)
T KOG0587|consen 170 SAQLDST--VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALF------LIP 241 (953)
T ss_pred eeeeecc--cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhc------cCC
Confidence 9876432 223456689999999997643 347789999999999999999999988765421100 011
Q ss_pred CchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 650 HRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
. ...+....+..-..++.++|..|+..|-+.||++.++++
T Consensus 242 R-----------NPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 242 R-----------NPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred C-----------CCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 1 111122223345677999999999999999999999875
No 392
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=8.8e-31 Score=262.16 Aligned_cols=238 Identities=31% Similarity=0.375 Sum_probs=192.7
Q ss_pred ccEEEEEEEec-CCCeEEEEEechhhHHH-HHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCCCCHHHHHhh
Q 005040 439 GFGSVYKGTLS-DGTNVAIKIFNLQLERA-FRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPNGSLEKWLYS 516 (717)
Q Consensus 439 ~~g~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 516 (717)
+||.||+|... +++.+|+|++....... .+.+.+|++.+++++|+|++++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999986 58999999997654333 57889999999999999999999999998999999999999999999986
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceeeeccccCccc
Q 005040 517 HNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQTMTMATIGY 596 (717)
Q Consensus 517 ~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y 596 (717)
... +++..+..++.++++++.||| ..+++|+||+|+||+++.++.++++|||.+....... ......++..|
T Consensus 81 ~~~-~~~~~~~~~~~~l~~~l~~lh----~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~ 152 (244)
T smart00220 81 RGR-LSEDEARFYARQILSALEYLH----SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTPEY 152 (244)
T ss_pred ccC-CCHHHHHHHHHHHHHHHHHHH----HcCeecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCCcCC
Confidence 544 889999999999999999999 5789999999999999999999999999998765432 22344578889
Q ss_pred cCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHH
Q 005040 597 MAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFS 676 (717)
Q Consensus 597 ~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (717)
+|||...+..++.++||||+|+++|++++|..||..... .....++........ ......++.+
T Consensus 153 ~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~-~~~~~~~~~~~~~~~---------------~~~~~~~~~~ 216 (244)
T smart00220 153 MAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQ-LLELFKKIGKPKPPF---------------PPPEWKISPE 216 (244)
T ss_pred CCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHhccCCCC---------------ccccccCCHH
Confidence 999998888899999999999999999999999865211 111111111100000 0000014456
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHH
Q 005040 677 IMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 677 l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
+.+++.+|+..+|++||++.++++
T Consensus 217 ~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 217 AKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHHHccCCchhccCHHHHhh
Confidence 889999999999999999999986
No 393
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=2.6e-31 Score=236.98 Aligned_cols=203 Identities=28% Similarity=0.351 Sum_probs=166.7
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhh-HHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCCeeEEEE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL-ERAFRSFDSECEILRNV-RHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~lv~ 502 (717)
.++......||+|+||.|-+.++. +|+..|+|.+.... .+..++..+|+.+..+. .+|.+|.++|.+.......+.|
T Consensus 45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcM 124 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICM 124 (282)
T ss_pred hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeH
Confidence 345555678999999999888764 89999999987654 33345566777766554 7999999999998888999999
Q ss_pred EccCCCCHHHHHh---hCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccC
Q 005040 503 EFMPNGSLEKWLY---SHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLG 579 (717)
Q Consensus 503 e~~~~g~L~~~l~---~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 579 (717)
|.|. .||..|-+ ..+..+++...-+|+..+.+||.|||+ ...++|||+||+|||++.+|++|+||||.+..+.
T Consensus 125 E~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~---kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~ 200 (282)
T KOG0984|consen 125 ELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS---KLSVIHRDVKPSNILINYDGQVKICDFGISGYLV 200 (282)
T ss_pred HHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH---HhhhhhccCCcceEEEccCCcEEEcccccceeeh
Confidence 9995 47776654 346668999999999999999999997 5679999999999999999999999999998774
Q ss_pred CCCCceeeeccccCccccCCCccC----CCCcCcccchhhHHHHHHHHHhCCCCCCcccc
Q 005040 580 EGEDSVIQTMTMATIGYMAPEYGS----EGIVSTKCDVYSYGVLLMETFTEKKPTDEMFT 635 (717)
Q Consensus 580 ~~~~~~~~~~~~~t~~y~aPE~~~----~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~ 635 (717)
. +...+...|--.|||||.+. ...|+.|+||||+|+.+.||.+++.||+....
T Consensus 201 d---SiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~t 257 (282)
T KOG0984|consen 201 D---SIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGT 257 (282)
T ss_pred h---hhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCC
Confidence 3 33334456777899999653 35799999999999999999999999987443
No 394
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=3.1e-31 Score=239.96 Aligned_cols=261 Identities=20% Similarity=0.329 Sum_probs=198.5
Q ss_pred hccCCccccccccccEEEEEEE-ecCCCeEEEEEechhhHHHHHHHHHHHHHHHhcC-CCceeeEeeeeecC--CeeEEE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGT-LSDGTNVAIKIFNLQLERAFRSFDSECEILRNVR-HRNLLKILGSCSNL--DFKALV 501 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-hpniv~~~~~~~~~--~~~~lv 501 (717)
.++|++++++|+|.|+.||.|. ..+.+.++||++++-.. +.+.+|+.+|+.|+ ||||+++++...+. ....+|
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkk---kKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKK---KKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHH---HHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 3688999999999999999998 45788899999986543 56788999999997 99999999998765 466899
Q ss_pred EEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCC-CCcEEEeeeccccccCC
Q 005040 502 LEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDE-NMVAHVSDFGISKLLGE 580 (717)
Q Consensus 502 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfgl~~~~~~ 580 (717)
+||+.+.+....-.. ++...+...+.+++.||.|+| +.||.|||+||.||++|. .-..+|+|+|+|.++.+
T Consensus 114 FE~v~n~Dfk~ly~t----l~d~dIryY~~elLkALdyCH----S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp 185 (338)
T KOG0668|consen 114 FEYVNNTDFKQLYPT----LTDYDIRYYIYELLKALDYCH----SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 185 (338)
T ss_pred hhhhccccHHHHhhh----hchhhHHHHHHHHHHHHhHHH----hcCcccccCCcceeeechhhceeeeeecchHhhcCC
Confidence 999998877665443 566778889999999999999 899999999999999995 45799999999999866
Q ss_pred CCCceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCC---------
Q 005040 581 GEDSVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPH--------- 650 (717)
Q Consensus 581 ~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--------- 650 (717)
+... ...+.+..|.-||.+-. ..|+.+-|+|||||++..|+..+.||-.......++.+.++-...+
T Consensus 186 ~~eY---nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY 262 (338)
T KOG0668|consen 186 GKEY---NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKY 262 (338)
T ss_pred Ccee---eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHH
Confidence 5433 33456777899997655 5688999999999999999999999865444444454444322222
Q ss_pred ------chhhhccccchhhhhhhhhh---HHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 651 ------RLTEVVDANLVREEQAFSDK---MDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 651 ------~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
+...++...-++....+... .-..+++.+++.+.+..|..+|+|++|+++
T Consensus 263 ~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 263 QIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred ccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 22222211111111111111 112367899999999999999999999875
No 395
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=1e-30 Score=288.79 Aligned_cols=259 Identities=22% Similarity=0.232 Sum_probs=169.5
Q ss_pred HhccCCccccccccccEEEEEEEec-C----CCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeee------ee
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTLS-D----GTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGS------CS 493 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~~-~----~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~------~~ 493 (717)
..++|+..+.||+|+||.||+|.+. + +..||+|++...... +....| .++...+.++..++.. ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 4578999999999999999999975 5 789999987643211 111111 1222222333222221 24
Q ss_pred cCCeeEEEEEccCCCCHHHHHhhCCCC-------------------CCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCC
Q 005040 494 NLDFKALVLEFMPNGSLEKWLYSHNYF-------------------LDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDL 554 (717)
Q Consensus 494 ~~~~~~lv~e~~~~g~L~~~l~~~~~~-------------------~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dl 554 (717)
.....++|+||+.+++|.+++...... .....+..++.|++.||.||| +.+|+||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH----~~gIiHRDL 281 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH----STGIVHRDV 281 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH----HCCEEeCcC
Confidence 556789999999999999999754311 112345679999999999999 678999999
Q ss_pred CCCCeeeCC-CCcEEEeeeccccccCCCCCceeeeccccCccccCCCccCCC----------------------CcCccc
Q 005040 555 KPTNILLDE-NMVAHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEG----------------------IVSTKC 611 (717)
Q Consensus 555 k~~Nill~~-~~~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~----------------------~~~~~~ 611 (717)
||+|||++. ++.+||+|||+++.+...... ......+++.|+|||.+... .++.++
T Consensus 282 KP~NILl~~~~~~~KL~DFGlA~~l~~~~~~-~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 282 KPQNIIFSEGSGSFKIIDLGAAADLRVGINY-IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred CHHHEEEeCCCCcEEEEeCCCcccccccccc-CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 999999985 689999999999866432221 22345689999999954221 234567
Q ss_pred chhhHHHHHHHHHhCCCCCCccc--------cCcchHHHHHHhhCCCchhhhccccchhhh-hhhhhhHHHHHHHHHHHh
Q 005040 612 DVYSYGVLLMETFTEKKPTDEMF--------TGEMSLRRWVKESLPHRLTEVVDANLVREE-QAFSDKMDCLFSIMDLAL 682 (717)
Q Consensus 612 Dvws~G~il~el~tg~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~ 682 (717)
||||+||++|||+++..|++... ........|... ..+...... ..+...........+|+.
T Consensus 361 DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~d~~~~~~~dLi~ 431 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKL---------VEPRASPDLRRGFEVLDLDGGAGWELLK 431 (566)
T ss_pred ccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHh---------hccccchhhhhhhhhccccchHHHHHHH
Confidence 99999999999999777654310 001111222111 111100000 000000011233568999
Q ss_pred hccCCCCCCCCCHHHHHHH
Q 005040 683 DCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 683 ~cl~~~P~~Rpt~~ev~~~ 701 (717)
+|++.||++|||++|+++.
T Consensus 432 ~mL~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 432 SMMRFKGRQRISAKAALAH 450 (566)
T ss_pred HHccCCcccCCCHHHHhCC
Confidence 9999999999999999873
No 396
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=2.3e-30 Score=278.22 Aligned_cols=257 Identities=23% Similarity=0.254 Sum_probs=180.3
Q ss_pred HhccCCccccccccccEEEEEEEe-----------------cCCCeEEEEEechhhHHHH--------------HHHHHH
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTL-----------------SDGTNVAIKIFNLQLERAF--------------RSFDSE 473 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~-----------------~~~~~vavK~~~~~~~~~~--------------~~~~~e 473 (717)
..++|++.++||+|+||+||+|.. .+++.||||.+........ +....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467999999999999999999963 2456799999864432222 223447
Q ss_pred HHHHHhcCCCce-----eeEeeeeec--------CCeeEEEEEccCCCCHHHHHhhCC----------------------
Q 005040 474 CEILRNVRHRNL-----LKILGSCSN--------LDFKALVLEFMPNGSLEKWLYSHN---------------------- 518 (717)
Q Consensus 474 ~~~l~~l~hpni-----v~~~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~~---------------------- 518 (717)
+.++.+++|.++ ++++++|.. .+..++||||+++++|.++++...
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777888866554 677777643 356799999999999999987421
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceeeeccccCcccc
Q 005040 519 -YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQTMTMATIGYM 597 (717)
Q Consensus 519 -~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~ 597 (717)
...++..+..++.|+++||.||| +.+|+||||||+||+++.++.+||+|||++......... ......+|+.|+
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH----~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~g~~tp~Y~ 377 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLH----RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF-NPLYGMLDPRYS 377 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCcc-CccccCCCccee
Confidence 12456788899999999999999 678999999999999999999999999999765432211 111223478999
Q ss_pred CCCccCCCC--------------------c--CcccchhhHHHHHHHHHhCCC-CCCccccCc-------chHHHHHHhh
Q 005040 598 APEYGSEGI--------------------V--STKCDVYSYGVLLMETFTEKK-PTDEMFTGE-------MSLRRWVKES 647 (717)
Q Consensus 598 aPE~~~~~~--------------------~--~~~~Dvws~G~il~el~tg~~-p~~~~~~~~-------~~~~~~~~~~ 647 (717)
|||.+.... + ..+.||||+||++|||++|.. |+.....-. .....|...
T Consensus 378 aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~- 456 (507)
T PLN03224 378 PPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMY- 456 (507)
T ss_pred ChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhh-
Confidence 999765322 1 134799999999999999875 664321111 111112110
Q ss_pred CCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCC---CCCCCHHHHHH
Q 005040 648 LPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTP---HKRIHMTDAAA 700 (717)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P---~~Rpt~~ev~~ 700 (717)
......++.....+....+++.+++..+| .+|+|++|+++
T Consensus 457 -------------~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 457 -------------KGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred -------------cccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 00001112222344667899999999866 68999999985
No 397
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.97 E-value=4e-33 Score=285.05 Aligned_cols=311 Identities=27% Similarity=0.382 Sum_probs=273.7
Q ss_pred CCCCccccCCCCCcEEECCCCcceec-CCcCCCCCCCCCEEEcccccccCccCCcccccccccccCccCCcEEeccCCCC
Q 005040 2 GTIPNSITNATKLIGLDLGLNSFSGH-IPNTFGNLRHLSVLSLMMNNLTTESSSADQWSFLSSLTNCRNLANLALASNPL 80 (717)
Q Consensus 2 ~~iP~~~~~l~~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l 80 (717)
.+|..+++.++.|+++++..|++... +|..+-.|..|+.||||+|+++.+|.+ +..-+++-.|+||+|+|
T Consensus 68 ~~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~EvP~~---------LE~AKn~iVLNLS~N~I 138 (1255)
T KOG0444|consen 68 ISVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLREVPTN---------LEYAKNSIVLNLSYNNI 138 (1255)
T ss_pred HhhhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhhhcchh---------hhhhcCcEEEEcccCcc
Confidence 45677889999999999999998632 677788999999999999999987654 78889999999999999
Q ss_pred cccCCcchhccccccceeeecCCcceecCCccccCCCCCcEEEccCCCCcccCCccccccCCCCEEeccCCccc-ccCCc
Q 005040 81 GGILPPLIGNFSASLQNIYAFECKLGGSIPKEIGNLRGLIVLSLGFNDLNGTIPTSIGTLQQLQGFYVPENNLQ-GYVPH 159 (717)
Q Consensus 81 ~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~-~~~~~ 159 (717)
.+++...|.++ ..|-.|+|++|++. .+|.....|.+|++|+|++|.+..-....+-.+++|+.|.+++.+-+ .-+|.
T Consensus 139 etIPn~lfinL-tDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Pt 216 (1255)
T KOG0444|consen 139 ETIPNSLFINL-TDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPT 216 (1255)
T ss_pred ccCCchHHHhh-HhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCC
Confidence 97766667676 56999999999999 77888999999999999999987544445556778888999987654 45788
Q ss_pred cccCCCCCCEEeccCCcCcccCCccccCCCCCCeEEecCccccCCCChhhhcccCCCeEEccCCcCcccCCccccCCCCC
Q 005040 160 DLCHLERLNILNLSGNKLSGAIPQCLASLTSLRSLYLQSNKLSSSLPSSLWSLEYILRINLSSNSLKGTLPSNIQKLNVL 239 (717)
Q Consensus 160 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 239 (717)
.+..|.+|..+|||.|.+. ..|+.+-++++|+.|+||+|+|+ .+........+|++|+||.|+++ .+|++++.++.|
T Consensus 217 sld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL 293 (1255)
T KOG0444|consen 217 SLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKL 293 (1255)
T ss_pred chhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHH
Confidence 8999999999999999998 89999999999999999999999 55666777889999999999999 899999999999
Q ss_pred CeEEccCCCCCC-CCcccccCCcccccccccCccccCCCCccccccCccceEeccCCCCCCCCcccccccccccEEEccC
Q 005040 240 IDLDLSRNQLSS-DIPSTIGTLKNLETLSLAGNQFQGPIPESVGNLISLESLDFSNNNLSGKIPKSLEALSHLKQFNVSH 318 (717)
Q Consensus 240 ~~L~l~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~~~~~~~~~~l~~L~~L~l~~ 318 (717)
+.|++.+|+++- -+|..++.+.+|+.++.++|.+. ..|+.++.+++|+.|.|+.|++. .+|+.+.-++.|+.|||..
T Consensus 294 ~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlre 371 (1255)
T KOG0444|consen 294 TKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRE 371 (1255)
T ss_pred HHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccC
Confidence 999999999763 37889999999999999999998 89999999999999999999998 8999999999999999999
Q ss_pred Cccccccccc
Q 005040 319 NRLEGEIPVK 328 (717)
Q Consensus 319 N~l~~~~p~~ 328 (717)
|+=--.+|..
T Consensus 372 NpnLVMPPKP 381 (1255)
T KOG0444|consen 372 NPNLVMPPKP 381 (1255)
T ss_pred CcCccCCCCc
Confidence 9866555543
No 398
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=2.8e-31 Score=281.80 Aligned_cols=242 Identities=27% Similarity=0.399 Sum_probs=187.3
Q ss_pred ccccccccccE-EEEEEEecCCCeEEEEEechhhHHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCCeeEEEEEccCCC
Q 005040 431 ECNLLGTGGFG-SVYKGTLSDGTNVAIKIFNLQLERAFRSFDSECEILRNV-RHRNLLKILGSCSNLDFKALVLEFMPNG 508 (717)
Q Consensus 431 ~~~~lg~G~~g-~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~g 508 (717)
..+.+|.|+.| .||+|.. +|+.||||++-.. ......+|+..|+.- +|||||++++.-.+..+.|++.|.|. .
T Consensus 513 ~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~-~ 587 (903)
T KOG1027|consen 513 PKEILGYGSNGTVVFRGVY-EGREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA-C 587 (903)
T ss_pred cHHHcccCCCCcEEEEEee-CCceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh-h
Confidence 34568999998 6799999 6899999987533 334567899999988 69999999999999999999999995 6
Q ss_pred CHHHHHhhCCCC---CCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCC---C--CcEEEeeeccccccCC
Q 005040 509 SLEKWLYSHNYF---LDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDE---N--MVAHVSDFGISKLLGE 580 (717)
Q Consensus 509 ~L~~~l~~~~~~---~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~---~--~~~kl~Dfgl~~~~~~ 580 (717)
+|.+++...... ......+.+..|++.||++|| +-+||||||||.|||++. + ..++|+|||+++.+..
T Consensus 588 sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLH----sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~ 663 (903)
T KOG1027|consen 588 SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLH----SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAG 663 (903)
T ss_pred hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHH----hcccccccCCCceEEEEccCCCcceeEEecccccccccCC
Confidence 999999874111 111345678999999999999 678999999999999975 3 4799999999999875
Q ss_pred CCCce-eeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhC-CCCCCccccCcchHHHHHHhhCCCchhhhccc
Q 005040 581 GEDSV-IQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTE-KKPTDEMFTGEMSLRRWVKESLPHRLTEVVDA 658 (717)
Q Consensus 581 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (717)
+..+. ......||-||+|||++....-+.++||||+||++|+.++| .+||++....+..+.. ....++
T Consensus 664 ~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~--------~~~~L~-- 733 (903)
T KOG1027|consen 664 GKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILT--------GNYTLV-- 733 (903)
T ss_pred CcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhc--------Ccccee--
Confidence 54332 24566799999999999998888899999999999999995 8999874322211110 000000
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 659 NLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
......++ ++.+||.+|+.++|..||+|.+|+.
T Consensus 734 -------~L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 734 -------HLEPLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred -------eeccCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 00111122 6889999999999999999999974
No 399
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=8.7e-29 Score=247.64 Aligned_cols=130 Identities=27% Similarity=0.353 Sum_probs=111.4
Q ss_pred ccCCccccccccccEEEEEEEe-cCCCeEEEEEechhhHHHHHHHHHHHHHHHhcC-----C---CceeeEeeeee----
Q 005040 427 DEFNECNLLGTGGFGSVYKGTL-SDGTNVAIKIFNLQLERAFRSFDSECEILRNVR-----H---RNLLKILGSCS---- 493 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h---pniv~~~~~~~---- 493 (717)
.+|.+.++||.|-|++||+|.+ .+.+.||+|+.+.. ..-.+....|+++|++++ | ..||++++.|.
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp 156 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP 156 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence 6899999999999999999985 47889999998755 334466788999999994 3 47999999984
Q ss_pred cCCeeEEEEEccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeee
Q 005040 494 NLDFKALVLEFMPNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILL 561 (717)
Q Consensus 494 ~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill 561 (717)
.+.+++||+|++ |.+|..++... -+.++...+.+|++||+.||.|||..+ +|+|-||||+|||+
T Consensus 157 NG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec---gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 157 NGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC---GIIHTDLKPENVLL 221 (590)
T ss_pred CCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc---CccccCCCcceeee
Confidence 456899999999 66999999854 345899999999999999999999854 89999999999999
No 400
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=8.5e-31 Score=242.95 Aligned_cols=265 Identities=23% Similarity=0.287 Sum_probs=192.7
Q ss_pred CCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecC-----CeeEE
Q 005040 429 FNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNL-----DFKAL 500 (717)
Q Consensus 429 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~-----~~~~l 500 (717)
.+..+.||.|+||.||.+.+. +|+.||+|++..-- -...+.+-+|++++...+|.|++..++...-. .+.|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 344578999999999999864 89999999886432 22345677899999999999999999876433 35678
Q ss_pred EEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCC
Q 005040 501 VLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGE 580 (717)
Q Consensus 501 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 580 (717)
++|.|. .+|...+-... .++...+.-+.+||++||+||| +-+|.||||||.|.|++++...||||||+++....
T Consensus 135 ~TELmQ-SDLHKIIVSPQ-~Ls~DHvKVFlYQILRGLKYLH----sA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 135 LTELMQ-SDLHKIIVSPQ-ALTPDHVKVFVYQILRGLKYLH----TANILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHHH-hhhhheeccCC-CCCcchhhhhHHHHHhhhHHHh----hcchhhccCCCccEEeccCceEEecccccccccch
Confidence 889885 48877766543 3777788889999999999999 78899999999999999999999999999987644
Q ss_pred CCCceeeeccccCccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCc-hhhh---
Q 005040 581 GEDSVIQTMTMATIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHR-LTEV--- 655 (717)
Q Consensus 581 ~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~--- 655 (717)
.+ ....+..+.|..|+|||.+++ ..|+.+.||||.||++.|++.++.-|.... ..+..+.+.+..-.. .+.+
T Consensus 209 d~-~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~--PiqQL~lItdLLGTPs~EaMr~A 285 (449)
T KOG0664|consen 209 RD-RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAG--PIEQLQMIIDLLGTPSQEAMKYA 285 (449)
T ss_pred hh-hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccC--hHHHHHHHHHHhCCCcHHHHHHH
Confidence 33 333445567999999998877 469999999999999999999888876532 222222222221111 1100
Q ss_pred --------ccc-----cchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 005040 656 --------VDA-----NLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLR 703 (717)
Q Consensus 656 --------~~~-----~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~ 703 (717)
+.. .+..-+ ......+-..+...+...++..||++|.+..+++..+-
T Consensus 286 CEGAk~H~LR~~~k~Ps~~vLY-tlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~ 345 (449)
T KOG0664|consen 286 CEGAKNHVLRAGLRAPDTQRLY-KIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY 345 (449)
T ss_pred hhhhHHHhhccCCCCCCcccee-eecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence 000 000000 01111122345778999999999999999999877553
No 401
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=5.9e-30 Score=260.39 Aligned_cols=196 Identities=24% Similarity=0.361 Sum_probs=169.9
Q ss_pred ccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHH-----HHHHHHHHHHhcC---CCceeeEeeeeec
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFR-----SFDSECEILRNVR---HRNLLKILGSCSN 494 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~-----~~~~e~~~l~~l~---hpniv~~~~~~~~ 494 (717)
.+|...+.+|+|+||.|+.|.++ +...|+||.+.+.. ..+.+ .+..|+++|+.++ |+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 56899999999999999999987 56779999887664 22222 3677999999997 9999999999999
Q ss_pred CCeeEEEEEcc-CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeec
Q 005040 495 LDFKALVLEFM-PNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFG 573 (717)
Q Consensus 495 ~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 573 (717)
.+++|++||.. ++-+|.+++..... +++..+..|++||+.|+++|| +.+|||||||-+||.++.+|-+||+|||
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~kp~-m~E~eAk~IFkQV~agi~hlh----~~~ivhrdikdenvivd~~g~~klidfg 715 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFKPR-MDEPEAKLIFKQVVAGIKHLH----DQGIVHRDIKDENVIVDSNGFVKLIDFG 715 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhccCc-cchHHHHHHHHHHHhcccccc----ccCceecccccccEEEecCCeEEEeecc
Confidence 99999999985 45699999986544 899999999999999999999 7899999999999999999999999999
Q ss_pred cccccCCCCCceeeeccccCccccCCCccCCCCc-CcccchhhHHHHHHHHHhCCCCCC
Q 005040 574 ISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIV-STKCDVYSYGVLLMETFTEKKPTD 631 (717)
Q Consensus 574 l~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~Dvws~G~il~el~tg~~p~~ 631 (717)
.+.+...+. .....||.+|.|||++.+..| +..-|||++|+++|.++....||-
T Consensus 716 saa~~ksgp----fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 716 SAAYTKSGP----FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred chhhhcCCC----cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 998764433 234579999999999998877 566899999999999999888874
No 402
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.96 E-value=1.6e-31 Score=260.77 Aligned_cols=299 Identities=30% Similarity=0.444 Sum_probs=159.8
Q ss_pred CCccccCCCCCcEEECCCCcceecCCcCCCCCCCCCEEEcccccccCccCCcccccccccccCccCCcEEeccCCCCccc
Q 005040 4 IPNSITNATKLIGLDLGLNSFSGHIPNTFGNLRHLSVLSLMMNNLTTESSSADQWSFLSSLTNCRNLANLALASNPLGGI 83 (717)
Q Consensus 4 iP~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~ 83 (717)
+|+..-+++.|++||...|-++ .+|..++.|.+|.-|+|.+|+|..+|. |.++..|++|+++.|+|. .
T Consensus 175 l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~~lPe----------f~gcs~L~Elh~g~N~i~-~ 242 (565)
T KOG0472|consen 175 LPENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIRFLPE----------FPGCSLLKELHVGENQIE-M 242 (565)
T ss_pred CCHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccccCCC----------CCccHHHHHHHhcccHHH-h
Confidence 3444444555555555555554 445555555555555555555554432 455555555555555554 3
Q ss_pred CCcchh-ccccccceeeecCCcceecCCccccCCCCCcEEEccCCCCcccCCccccccCCCCEEeccCCccccc------
Q 005040 84 LPPLIG-NFSASLQNIYAFECKLGGSIPKEIGNLRGLIVLSLGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGY------ 156 (717)
Q Consensus 84 ~~~~~~-~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~------ 156 (717)
+|...+ ++ .++..|||.+|++. ..|+.+.-+++|.+||+|+|.|+ ..|..++++ +|+.|-+.+|.+..+
T Consensus 243 lpae~~~~L-~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~ 318 (565)
T KOG0472|consen 243 LPAEHLKHL-NSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIIS 318 (565)
T ss_pred hHHHHhccc-ccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHc
Confidence 333333 33 44555555555555 44555555555555555555555 344455555 555555555554311
Q ss_pred --------------------------------CCc---cccCCCCCCEEeccCCcCcc----------------------
Q 005040 157 --------------------------------VPH---DLCHLERLNILNLSGNKLSG---------------------- 179 (717)
Q Consensus 157 --------------------------------~~~---~~~~l~~L~~L~L~~n~l~~---------------------- 179 (717)
.+. +...+.+.+.|++++=+++.
T Consensus 319 ~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskN 398 (565)
T KOG0472|consen 319 KGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKN 398 (565)
T ss_pred ccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccc
Confidence 000 01112234444444444442
Q ss_pred ---cCCccccCCCCCCe-EEecCccccCCCChhhhcccCCCeEEccCCcCcccCCccccCCCCCCeEEccCCCCCCCCcc
Q 005040 180 ---AIPQCLASLTSLRS-LYLQSNKLSSSLPSSLWSLEYILRINLSSNSLKGTLPSNIQKLNVLIDLDLSRNQLSSDIPS 255 (717)
Q Consensus 180 ---~~~~~~~~l~~L~~-L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 255 (717)
.+|..+..+..+.+ +.+++|.+. .+|..++.+++|+.|+|++|-+. .+|..++.+..|+.|+++.|.+. ..|.
T Consensus 399 qL~elPk~L~~lkelvT~l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~ 475 (565)
T KOG0472|consen 399 QLCELPKRLVELKELVTDLVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPE 475 (565)
T ss_pred hHhhhhhhhHHHHHHHHHHHhhcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchH
Confidence 34443333333222 233333333 55555666666666666666665 55666666666666666666665 4566
Q ss_pred cccCCcccccccccCccccCCCCccccccCccceEeccCCCCCCCCcccccccccccEEEccCCccc
Q 005040 256 TIGTLKNLETLSLAGNQFQGPIPESVGNLISLESLDFSNNNLSGKIPKSLEALSHLKQFNVSHNRLE 322 (717)
Q Consensus 256 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~~~~~~~~~~l~~L~~L~l~~N~l~ 322 (717)
++-.+..|+.+-.++|++....+..+.+|.+|.+|||.+|.+. .+|+.+++|.+|++|++.||++.
T Consensus 476 ~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 476 CLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred HHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 5555555666666666666555555666666666666666666 56666666666666666666666
No 403
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.96 E-value=1.4e-27 Score=233.38 Aligned_cols=210 Identities=37% Similarity=0.528 Sum_probs=182.9
Q ss_pred ccccccEEEEEEEec-CCCeEEEEEechhhHH-HHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCCCCHHH
Q 005040 435 LGTGGFGSVYKGTLS-DGTNVAIKIFNLQLER-AFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPNGSLEK 512 (717)
Q Consensus 435 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~ 512 (717)
||+|.+|.||++... +++.+++|++...... ..+.+.+|++.++.++|++++++++++......++++||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 689999999999986 4899999999766432 34678899999999999999999999999899999999999999999
Q ss_pred HHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCC-CCcEEEeeeccccccCCCCCceeeeccc
Q 005040 513 WLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDE-NMVAHVSDFGISKLLGEGEDSVIQTMTM 591 (717)
Q Consensus 513 ~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfgl~~~~~~~~~~~~~~~~~ 591 (717)
++......+++..+..++.++++++.||| +.+++|+||+|.||+++. ++.++|+|||.+........ ......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh----~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~ 154 (215)
T cd00180 81 LLKENEGKLSEDEILRILLQILEGLEYLH----SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTIV 154 (215)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhccc
Confidence 99876445899999999999999999999 679999999999999999 89999999999987644321 122345
Q ss_pred cCccccCCCccCCC-CcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhhh
Q 005040 592 ATIGYMAPEYGSEG-IVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSDK 670 (717)
Q Consensus 592 ~t~~y~aPE~~~~~-~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (717)
+...|++||..... .++.++|+|++|++++++
T Consensus 155 ~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------------------------------------- 187 (215)
T cd00180 155 GTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------------------------------------------- 187 (215)
T ss_pred CCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------------------
Confidence 67889999988777 888999999999999998
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 671 MDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 671 ~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
..+.+++.+|++.+|++||++.++++.
T Consensus 188 ----~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ----PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ----HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 236799999999999999999999864
No 404
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.96 E-value=5.7e-32 Score=263.81 Aligned_cols=323 Identities=28% Similarity=0.430 Sum_probs=206.1
Q ss_pred CCCCccccCCCCCcEEECCCCcceecCCcCCCCCCCCCEEEcccccccCccCCcccccccccccCccCCcEEeccCCCCc
Q 005040 2 GTIPNSITNATKLIGLDLGLNSFSGHIPNTFGNLRHLSVLSLMMNNLTTESSSADQWSFLSSLTNCRNLANLALASNPLG 81 (717)
Q Consensus 2 ~~iP~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~ 81 (717)
.++|.++.++.++..|++.+|+++...|+.+ +++.|++||+..|.++.+|++ ++.+.+|..|+|..|+|.
T Consensus 150 ~slp~~~~~~~~l~~l~~~~n~l~~l~~~~i-~m~~L~~ld~~~N~L~tlP~~---------lg~l~~L~~LyL~~Nki~ 219 (565)
T KOG0472|consen 150 SSLPEDMVNLSKLSKLDLEGNKLKALPENHI-AMKRLKHLDCNSNLLETLPPE---------LGGLESLELLYLRRNKIR 219 (565)
T ss_pred ccCchHHHHHHHHHHhhccccchhhCCHHHH-HHHHHHhcccchhhhhcCChh---------hcchhhhHHHHhhhcccc
Confidence 3455555555555555555555553333322 255555555555555554432 556666666666666665
Q ss_pred ccCCcchhccccccceeeecCCcceecCCcc-ccCCCCCcEEEccCCCCcccCCccccccCCCCEEeccCCcccccCCcc
Q 005040 82 GILPPLIGNFSASLQNIYAFECKLGGSIPKE-IGNLRGLIVLSLGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPHD 160 (717)
Q Consensus 82 ~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~-~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~ 160 (717)
..| .|..- ..|++|++..|.|. .+|.. ..++++|..|||.+|+++ ..|+.+.-+.+|.+||+++|.|++ .|..
T Consensus 220 -~lP-ef~gc-s~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~-Lp~s 293 (565)
T KOG0472|consen 220 -FLP-EFPGC-SLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISS-LPYS 293 (565)
T ss_pred -cCC-CCCcc-HHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCcccc-CCcc
Confidence 334 33322 34666666666666 33333 336666666666666666 556666666666666666666663 3445
Q ss_pred ccCCCCCCEEeccCCcCccc--------------------------------------CCccc---cCCCCCCeEEecCc
Q 005040 161 LCHLERLNILNLSGNKLSGA--------------------------------------IPQCL---ASLTSLRSLYLQSN 199 (717)
Q Consensus 161 ~~~l~~L~~L~L~~n~l~~~--------------------------------------~~~~~---~~l~~L~~L~L~~N 199 (717)
++++ +|+.|.+.+|.+..+ .+..| ..+-+.+.|++++-
T Consensus 294 Lgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~ 372 (565)
T KOG0472|consen 294 LGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDK 372 (565)
T ss_pred cccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhccccc
Confidence 6666 666666666655310 00000 00112333333333
Q ss_pred cccC-------------------------CCChhhhcccCCCe-EEccCCcCcccCCccccCCCCCCeEEccCCCCCCCC
Q 005040 200 KLSS-------------------------SLPSSLWSLEYILR-INLSSNSLKGTLPSNIQKLNVLIDLDLSRNQLSSDI 253 (717)
Q Consensus 200 ~l~~-------------------------~~~~~~~~l~~L~~-L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 253 (717)
+++. .+|..+..++.+.+ +.+++|.+ +.+|..++.+++|..|+|++|.+. .+
T Consensus 373 qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~i-sfv~~~l~~l~kLt~L~L~NN~Ln-~L 450 (565)
T KOG0472|consen 373 QLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKI-SFVPLELSQLQKLTFLDLSNNLLN-DL 450 (565)
T ss_pred ccccCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCcc-ccchHHHHhhhcceeeecccchhh-hc
Confidence 3331 23333333333322 22333333 367777888999999999999998 48
Q ss_pred cccccCCcccccccccCccccCCCCccccccCccceEeccCCCCCCCCcccccccccccEEEccCCcccccccccccccc
Q 005040 254 PSTIGTLKNLETLSLAGNQFQGPIPESVGNLISLESLDFSNNNLSGKIPKSLEALSHLKQFNVSHNRLEGEIPVKGSFKD 333 (717)
Q Consensus 254 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~ 333 (717)
|..++.+..|+.|++|.|++. ..|..+..+..|+.+-.++|++..+.|..+.+|.+|.+|||.+|.+...+|..|.+..
T Consensus 451 P~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~Lgnmtn 529 (565)
T KOG0472|consen 451 PEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTN 529 (565)
T ss_pred chhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchhhCChhhccccc
Confidence 888999999999999999998 7888888888888888888999988888899999999999999999999998899999
Q ss_pred cccccccCCcc
Q 005040 334 FSAQSYFGNYA 344 (717)
Q Consensus 334 ~~~~~~~~n~~ 344 (717)
+..+.+.||+.
T Consensus 530 L~hLeL~gNpf 540 (565)
T KOG0472|consen 530 LRHLELDGNPF 540 (565)
T ss_pred eeEEEecCCcc
Confidence 99888888875
No 405
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=9.4e-29 Score=235.44 Aligned_cols=259 Identities=23% Similarity=0.274 Sum_probs=195.2
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecC------C
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNL------D 496 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~------~ 496 (717)
..+|.-.+.+|.|.- .|..|.+. .+++||+|.....- ....++..+|..++..++|+||++++.++.-. .
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 357777888999998 67777654 78899999774332 23345667899999999999999999998543 3
Q ss_pred eeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeecccc
Q 005040 497 FKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISK 576 (717)
Q Consensus 497 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 576 (717)
..|+|||+|. .+|.+.+.. .++..++..+..|++.|++||| +.+|+||||||+||++..+..+||.|||+++
T Consensus 95 e~y~v~e~m~-~nl~~vi~~---elDH~tis~i~yq~~~~ik~lh----s~~IihRdLkPsnivv~~~~~lKi~dfg~ar 166 (369)
T KOG0665|consen 95 EVYLVMELMD-ANLCQVILM---ELDHETISYILYQMLCGIKHLH----SAGIIHRDLKPSNIVVNSDCTLKILDFGLAR 166 (369)
T ss_pred hHHHHHHhhh-hHHHHHHHH---hcchHHHHHHHHHHHHHHHHHH----hcceeecccCcccceecchhheeeccchhhc
Confidence 5699999995 599998883 2788899999999999999999 7899999999999999999999999999998
Q ss_pred ccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhC----CC-c
Q 005040 577 LLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESL----PH-R 651 (717)
Q Consensus 577 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~----~~-~ 651 (717)
.-+.. ...+..+.|..|.|||++.+-.|.+.+||||.||++.||++|+.-|. ++..+.+|.+... +. .
T Consensus 167 ~e~~~---~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~----g~d~idQ~~ki~~~lgtpd~~ 239 (369)
T KOG0665|consen 167 TEDTD---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFP----GKDHIDQWNKIIEQLGTPDPS 239 (369)
T ss_pred ccCcc---cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEec----CchHHHHHHHHHHHhcCCCHH
Confidence 65433 23345568999999999888889999999999999999999998765 5566666754221 00 0
Q ss_pred h-hh-------hcc-----------ccchhhh--hhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 652 L-TE-------VVD-----------ANLVREE--QAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 652 ~-~~-------~~~-----------~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
. .+ .+. ..++... .......--...+.+++.+||..+|++|.+++++++
T Consensus 240 F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 240 FMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred HHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 0 00 000 0000000 000000011245789999999999999999999985
No 406
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.95 E-value=2.2e-28 Score=227.14 Aligned_cols=252 Identities=20% Similarity=0.287 Sum_probs=189.4
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhc-CCCceeeEeee-eecCCeeEEEE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNV-RHRNLLKILGS-CSNLDFKALVL 502 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~~~~~-~~~~~~~~lv~ 502 (717)
.+.|++.+.+|+|.||.+-+++++ +.+.+++|.+...... .++|.+|...--.| .|.||+.-|+. |+..+.+++++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt-~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q 101 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTT-QADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ 101 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhh-HHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence 368899999999999999999986 6788999988766433 36788887766666 59999998874 67778888999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeC--CCCcEEEeeeccccccCC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLD--ENMVAHVSDFGISKLLGE 580 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~--~~~~~kl~Dfgl~~~~~~ 580 (717)
||++.|+|.+-+...+ +-+.....++.|++.|+.|+| ++++||||||.+|||+- +...+|+||||.++..+.
T Consensus 102 E~aP~gdL~snv~~~G--igE~~~K~v~~ql~SAi~fMH----sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~ 175 (378)
T KOG1345|consen 102 EFAPRGDLRSNVEAAG--IGEANTKKVFAQLLSAIEFMH----SKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT 175 (378)
T ss_pred ccCccchhhhhcCccc--ccHHHHHHHHHHHHHHHHHhh----ccchhhcccccceEEEecCCccEEEeeecccccccCc
Confidence 9999999999888755 778888999999999999999 78999999999999994 345899999999986543
Q ss_pred CCCceeeeccccCccccCCCccCC-----CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhh
Q 005040 581 GEDSVIQTMTMATIGYMAPEYGSE-----GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEV 655 (717)
Q Consensus 581 ~~~~~~~~~~~~t~~y~aPE~~~~-----~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (717)
.. .....+..|-|||.... -...+.+|||.||+++|.++||+.||....-.+..+.+|.. +..+..
T Consensus 176 tV-----~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~--w~~rk~-- 246 (378)
T KOG1345|consen 176 TV-----KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQ--WLKRKN-- 246 (378)
T ss_pred ee-----hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHH--HhcccC--
Confidence 21 12223566899995332 23567899999999999999999999865545555554432 111111
Q ss_pred ccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 656 VDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
+++++... .+++.+..+.++-+..+|++|--..++.+.
T Consensus 247 --~~~P~~F~------~fs~~a~r~Fkk~lt~~~~drcki~~~kk~ 284 (378)
T KOG1345|consen 247 --PALPKKFN------PFSEKALRLFKKSLTPRFKDRCKIWTAKKM 284 (378)
T ss_pred --ccCchhhc------ccCHHHHHHHHHhcCCcccccchhHHHHHH
Confidence 12222111 234557789999999999999444444333
No 407
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=3e-29 Score=259.47 Aligned_cols=253 Identities=25% Similarity=0.351 Sum_probs=203.2
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
.++|+..+.+|.|.||.||+|++. .++..|+|+++......+.-+.+|+-+++..+||||+.++|.+...+...++|||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 468899999999999999999965 7899999999988888888888999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
|.+|+|.+.=+- ...+++.++..+++...+|++||| +.+-+|||||-.||++++.|.+|++|||.+..+... -
T Consensus 94 cgggslQdiy~~-TgplselqiayvcRetl~gl~ylh----s~gk~hRdiKGanilltd~gDvklaDfgvsaqitat--i 166 (829)
T KOG0576|consen 94 CGGGSLQDIYHV-TGPLSELQIAYVCRETLQGLKYLH----SQGKIHRDIKGANILLTDEGDVKLADFGVSAQITAT--I 166 (829)
T ss_pred cCCCcccceeee-cccchhHHHHHHHhhhhccchhhh----cCCcccccccccceeecccCceeecccCchhhhhhh--h
Confidence 999999885443 345889999999999999999999 788999999999999999999999999998776432 2
Q ss_pred eeeeccccCccccCCCc---cCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccch
Q 005040 585 VIQTMTMATIGYMAPEY---GSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLV 661 (717)
Q Consensus 585 ~~~~~~~~t~~y~aPE~---~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (717)
.......||+.|||||+ ...+.|..++|||+.|+...|+-.-++|..+..+ ++...-+. +..+++.-.
T Consensus 167 ~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhp----mr~l~LmT-----kS~~qpp~l 237 (829)
T KOG0576|consen 167 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHP----MRALFLMT-----KSGFQPPTL 237 (829)
T ss_pred hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccch----HHHHHHhh-----ccCCCCCcc
Confidence 23345679999999995 5677899999999999999999888888543221 11111100 011111111
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 662 REEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 662 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.....-...+-++++.|+..+|++||+++.+++
T Consensus 238 ------kDk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 238 ------KDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred ------cCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 111122345779999999999999999988664
No 408
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.95 E-value=7.7e-27 Score=230.74 Aligned_cols=199 Identities=29% Similarity=0.434 Sum_probs=172.5
Q ss_pred CCccccccccccEEEEEEEec-CCCeEEEEEechhhHH-HHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccC
Q 005040 429 FNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLER-AFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMP 506 (717)
Q Consensus 429 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 506 (717)
|+..+.||+|++|.||++... +++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 556789999999999999986 4889999999765443 56788899999999999999999999998899999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCcee
Q 005040 507 NGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVI 586 (717)
Q Consensus 507 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~ 586 (717)
+++|.+++......+++..+..++.+++.++.||| ..+++|+|++|+||+++.++.++|+|||.+......... .
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh----~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~-~ 155 (225)
T smart00221 81 GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLH----SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA-L 155 (225)
T ss_pred CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc-c
Confidence 99999999875443789999999999999999999 578999999999999999999999999999877543200 1
Q ss_pred eeccccCccccCCCcc-CCCCcCcccchhhHHHHHHHHHhCCCCCCc
Q 005040 587 QTMTMATIGYMAPEYG-SEGIVSTKCDVYSYGVLLMETFTEKKPTDE 632 (717)
Q Consensus 587 ~~~~~~t~~y~aPE~~-~~~~~~~~~Dvws~G~il~el~tg~~p~~~ 632 (717)
.....++..|++||.. ....++.++|||+||++++||++|+.||..
T Consensus 156 ~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 156 LKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 1233567889999987 667788899999999999999999999965
No 409
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.95 E-value=6.2e-28 Score=242.62 Aligned_cols=266 Identities=23% Similarity=0.262 Sum_probs=200.7
Q ss_pred HhccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcC------CCceeeEeeeeecCCe
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVR------HRNLLKILGSCSNLDF 497 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~------hpniv~~~~~~~~~~~ 497 (717)
-..+|.+....|+|-|++|.+|... .|..||||++.... -....=..|+++|++|+ .-++++++-.|....+
T Consensus 430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknH 508 (752)
T KOG0670|consen 430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNH 508 (752)
T ss_pred hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcce
Confidence 3478999999999999999999865 68899999997653 23345567999999995 3488999999999999
Q ss_pred eEEEEEccCCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCC-CCcEEEeeecc
Q 005040 498 KALVLEFMPNGSLEKWLYSHN--YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDE-NMVAHVSDFGI 574 (717)
Q Consensus 498 ~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfgl 574 (717)
+|||||.+ ..+|.++++..+ ..+....+..+++|+.-||..|- .-+|+|.||||.|||+.+ ...+||||||.
T Consensus 509 LClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK----~c~vlHaDIKPDNiLVNE~k~iLKLCDfGS 583 (752)
T KOG0670|consen 509 LCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLK----KCGVLHADIKPDNILVNESKNILKLCDFGS 583 (752)
T ss_pred eEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHH----hcCeeecccCccceEeccCcceeeeccCcc
Confidence 99999998 469999998653 34777889999999999999999 457999999999999985 45689999999
Q ss_pred ccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcch---------------
Q 005040 575 SKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMS--------------- 639 (717)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~--------------- 639 (717)
|........+ ....+..|.|||.+.+..|+...|+||.||.|||++||+..|.+.....+.
T Consensus 584 A~~~~eneit----PYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~Kml 659 (752)
T KOG0670|consen 584 ASFASENEIT----PYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKML 659 (752)
T ss_pred cccccccccc----HHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHh
Confidence 9887655432 234567799999999999999999999999999999999988774332210
Q ss_pred -HHHHHHhhCCCchh---hhccc---------------------cchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCC
Q 005040 640 -LRRWVKESLPHRLT---EVVDA---------------------NLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIH 694 (717)
Q Consensus 640 -~~~~~~~~~~~~~~---~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt 694 (717)
-.++..+++...+. .-+|+ .+...+............+.+|+.+|+..||++|.|
T Consensus 660 RKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit 739 (752)
T KOG0670|consen 660 RKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRIT 739 (752)
T ss_pred hhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCC
Confidence 01122222221100 00010 000000011122344567899999999999999999
Q ss_pred HHHHHH
Q 005040 695 MTDAAA 700 (717)
Q Consensus 695 ~~ev~~ 700 (717)
..++++
T Consensus 740 ~nqAL~ 745 (752)
T KOG0670|consen 740 VNQALK 745 (752)
T ss_pred HHHHhc
Confidence 999875
No 410
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.94 E-value=4e-27 Score=233.09 Aligned_cols=269 Identities=24% Similarity=0.302 Sum_probs=198.9
Q ss_pred HHHHhccCCccccccccccEEEEEEEec----CCCeEEEEEechhhHHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCC
Q 005040 422 IRRATDEFNECNLLGTGGFGSVYKGTLS----DGTNVAIKIFNLQLERAFRSFDSECEILRNV-RHRNLLKILGSCSNLD 496 (717)
Q Consensus 422 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~ 496 (717)
.....+.|..+++||+|.|++||+|... ..+.||+|.+...... ..+..|+++|..+ .+.||+++.+++...+
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p--~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP--SRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc--hHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 3445578899999999999999999853 4678999988655433 5688899999999 5999999999999999
Q ss_pred eeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeC-CCCcEEEeeeccc
Q 005040 497 FKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLD-ENMVAHVSDFGIS 575 (717)
Q Consensus 497 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfgl~ 575 (717)
...+|+||++..+..++... ++...+...+..+..||.++| .+|||||||||+|++.+ ..+.-.|+|||++
T Consensus 109 ~v~ivlp~~~H~~f~~l~~~----l~~~~i~~Yl~~ll~Al~~~h----~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA 180 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYRS----LSLAEIRWYLRNLLKALAHLH----KNGIVHRDIKPSNFLYNRRTQRGVLVDFGLA 180 (418)
T ss_pred eeEEEecccCccCHHHHHhc----CCHHHHHHHHHHHHHHhhhhh----ccCccccCCCccccccccccCCceEEechhH
Confidence 99999999999998888776 567888899999999999999 78999999999999998 5667899999999
Q ss_pred cccCCCC------------------------------------------CceeeeccccCccccCCCccCC-CCcCcccc
Q 005040 576 KLLGEGE------------------------------------------DSVIQTMTMATIGYMAPEYGSE-GIVSTKCD 612 (717)
Q Consensus 576 ~~~~~~~------------------------------------------~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~D 612 (717)
..+.... .........||+||.|||++.. +.-+.++|
T Consensus 181 ~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiD 260 (418)
T KOG1167|consen 181 QRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAID 260 (418)
T ss_pred HHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccc
Confidence 8321100 0001122469999999997655 55788999
Q ss_pred hhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhC----------CCc--hhh---------h------cc-ccchh-h
Q 005040 613 VYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESL----------PHR--LTE---------V------VD-ANLVR-E 663 (717)
Q Consensus 613 vws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~----------~~~--~~~---------~------~~-~~~~~-~ 663 (717)
|||.||++..+++++.||-....+-..+.+.+.... +.. +.+ . ++ ..+.. .
T Consensus 261 iws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~ 340 (418)
T KOG1167|consen 261 IWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSR 340 (418)
T ss_pred eeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccc
Confidence 999999999999999998654333333333322111 111 000 0 00 00000 0
Q ss_pred hh--hhhhh-HHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 664 EQ--AFSDK-MDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 664 ~~--~~~~~-~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
.. ..... ..++..+++++.+|+..||.+|.|++++++
T Consensus 341 q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 341 QPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred ccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 00 00111 122347899999999999999999999885
No 411
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.93 E-value=3e-25 Score=210.37 Aligned_cols=169 Identities=22% Similarity=0.185 Sum_probs=129.9
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceee
Q 005040 508 GSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQ 587 (717)
Q Consensus 508 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~ 587 (717)
|+|.++++..+..+++..++.++.|++.||+||| +.+ ||+||+++.++.+|+ ||++.......
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH----~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~----- 63 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELH----RQA------KSGNILLTWDGLLKL--DGSVAFKTPEQ----- 63 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH----hcC------CcccEeEcCccceee--ccceEeecccc-----
Confidence 6899999876667999999999999999999999 444 999999999999999 99988754321
Q ss_pred eccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhh
Q 005040 588 TMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAF 667 (717)
Q Consensus 588 ~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (717)
..||+.|+|||++.+..++.++|||||||++|||+||+.||............+.....+.... + .
T Consensus 64 --~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~---------~ 129 (176)
T smart00750 64 --SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPR---D---------R 129 (176)
T ss_pred --CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCcc---c---------c
Confidence 2578999999999999999999999999999999999999965432222222222221111000 0 0
Q ss_pred hhhHHHH--HHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHH
Q 005040 668 SDKMDCL--FSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKA 707 (717)
Q Consensus 668 ~~~~~~~--~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~ 707 (717)
....... .++.+++.+||..+|++||++.|+++.+..+..
T Consensus 130 ~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 130 SNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred ccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 0111222 258899999999999999999999999887643
No 412
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.92 E-value=1.7e-27 Score=255.52 Aligned_cols=334 Identities=28% Similarity=0.361 Sum_probs=212.7
Q ss_pred CCCCccccCCCCCcEEECCCCcceecCCcCCCCCCCCCEEEcccccccCccCCccccccccc-----------cc-----
Q 005040 2 GTIPNSITNATKLIGLDLGLNSFSGHIPNTFGNLRHLSVLSLMMNNLTTESSSADQWSFLSS-----------LT----- 65 (717)
Q Consensus 2 ~~iP~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~-----------l~----- 65 (717)
.++|.+++++.+|++|.|.+|.+. ..|..+..+++|++|+++.|++..+|...+....... ++
T Consensus 81 ~~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik 159 (1081)
T KOG0618|consen 81 RSVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFGPIPLVIEVLTAEEELAASNNEKIQRLGQTSIK 159 (1081)
T ss_pred hhCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccCCCchhHHhhhHHHHHhhhcchhhhhhccccch
Confidence 456777777777777777777776 5777777777777777777777766554322110000 00
Q ss_pred ---------------CccCCc-EEeccCCCCcccCCcchhcc----------------ccccceeeecCCcceecCCccc
Q 005040 66 ---------------NCRNLA-NLALASNPLGGILPPLIGNF----------------SASLQNIYAFECKLGGSIPKEI 113 (717)
Q Consensus 66 ---------------~l~~L~-~L~L~~N~l~~~~~~~~~~l----------------~~~L~~L~l~~n~l~~~~~~~~ 113 (717)
....|+ .|+|++|.+....-..+..+ .++|+.|+.++|.+....+ .+
T Consensus 160 ~~~l~~n~l~~~~~~~i~~l~~~ldLr~N~~~~~dls~~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~-~p 238 (1081)
T KOG0618|consen 160 KLDLRLNVLGGSFLIDIYNLTHQLDLRYNEMEVLDLSNLANLEVLHCERNQLSELEISGPSLTALYADHNPLTTLDV-HP 238 (1081)
T ss_pred hhhhhhhhcccchhcchhhhheeeecccchhhhhhhhhccchhhhhhhhcccceEEecCcchheeeeccCcceeecc-cc
Confidence 111122 24555554441100000000 0123333444444442111 11
Q ss_pred cCCCCCcEEEccCCCCcccCCccccccCCCCEEeccCCcccccCCccccCCCCCCEEeccCCcCcccCCccccCCCCCCe
Q 005040 114 GNLRGLIVLSLGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPHDLCHLERLNILNLSGNKLSGAIPQCLASLTSLRS 193 (717)
Q Consensus 114 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 193 (717)
. -.+|+++++++|+++ .+|++++.+.+|+.|...+|++. ..|..+..+++|+.|++..|.++ -+|.....+.+|++
T Consensus 239 ~-p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~t 314 (1081)
T KOG0618|consen 239 V-PLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRT 314 (1081)
T ss_pred c-cccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeee
Confidence 1 146777777777777 34577777888888888888775 45566666677777777777776 45556667788888
Q ss_pred EEecCccccCCCChhh-h-------------------------cccCCCeEEccCCcCcccCCccccCCCCCCeEEccCC
Q 005040 194 LYLQSNKLSSSLPSSL-W-------------------------SLEYILRINLSSNSLKGTLPSNIQKLNVLIDLDLSRN 247 (717)
Q Consensus 194 L~L~~N~l~~~~~~~~-~-------------------------~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 247 (717)
|+|..|+|.. .|+.+ . .++.|+.|.+.+|.++...-..+.++.+|+.|+|++|
T Consensus 315 LdL~~N~L~~-lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyN 393 (1081)
T KOG0618|consen 315 LDLQSNNLPS-LPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYN 393 (1081)
T ss_pred eeehhccccc-cchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeeccc
Confidence 8888888873 33322 1 1233566777777777666667777888888888888
Q ss_pred CCCCCCcccccCCcccccccccCccccCCCCccccccCccceEeccCCCCCCCCcccccccccccEEEccCCccccc-cc
Q 005040 248 QLSSDIPSTIGTLKNLETLSLAGNQFQGPIPESVGNLISLESLDFSNNNLSGKIPKSLEALSHLKQFNVSHNRLEGE-IP 326 (717)
Q Consensus 248 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~~~~~~~~~~l~~L~~L~l~~N~l~~~-~p 326 (717)
++.......+.+++.|+.|+||+|+++ .+|+.+.+++.|++|...+|.+. ..| .+..++.|+.+|++.|+|+.. +|
T Consensus 394 rL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~ 470 (1081)
T KOG0618|consen 394 RLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLP 470 (1081)
T ss_pred ccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhh
Confidence 888655567778888888888888887 67778888888888888888887 556 777888888888888888653 34
Q ss_pred ccccccccccccccCCccc
Q 005040 327 VKGSFKDFSAQSYFGNYAL 345 (717)
Q Consensus 327 ~~~~~~~~~~~~~~~n~~~ 345 (717)
.....+.++.+.+.||.+.
T Consensus 471 ~~~p~p~LkyLdlSGN~~l 489 (1081)
T KOG0618|consen 471 EALPSPNLKYLDLSGNTRL 489 (1081)
T ss_pred hhCCCcccceeeccCCccc
Confidence 4444466777777777753
No 413
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.92 E-value=9.6e-26 Score=262.69 Aligned_cols=195 Identities=19% Similarity=0.252 Sum_probs=138.2
Q ss_pred cCC-CceeeEeeee-------ecCCeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEe
Q 005040 480 VRH-RNLLKILGSC-------SNLDFKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIH 551 (717)
Q Consensus 480 l~h-pniv~~~~~~-------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH 551 (717)
++| +||+.+++++ ...+..+.++||+ +++|.+++......+++..+..++.||++||+||| +++|+|
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH----~~gIvH 103 (793)
T PLN00181 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAH----SQGIVV 103 (793)
T ss_pred hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHH----hCCeee
Confidence 445 5788888877 2234567788987 56999999876666999999999999999999999 789999
Q ss_pred cCCCCCCeeeCCCC-------------------cEEEeeeccccccCCCCC--------------ceeeeccccCccccC
Q 005040 552 CDLKPTNILLDENM-------------------VAHVSDFGISKLLGEGED--------------SVIQTMTMATIGYMA 598 (717)
Q Consensus 552 ~dlk~~Nill~~~~-------------------~~kl~Dfgl~~~~~~~~~--------------~~~~~~~~~t~~y~a 598 (717)
|||||+|||++..+ .+|++|||+++....... ........||+.|||
T Consensus 104 rDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 183 (793)
T PLN00181 104 HNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTS 183 (793)
T ss_pred ccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEC
Confidence 99999999996544 455666666543211000 000112357889999
Q ss_pred CCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHH
Q 005040 599 PEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIM 678 (717)
Q Consensus 599 PE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 678 (717)
||++.+..++.++|||||||++|||++|..|+.... .....+..... .+.. ........
T Consensus 184 PE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~---~~~~~~~~~~~--------~~~~----------~~~~~~~~ 242 (793)
T PLN00181 184 PEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS---RTMSSLRHRVL--------PPQI----------LLNWPKEA 242 (793)
T ss_pred hhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH---HHHHHHHHhhc--------Chhh----------hhcCHHHH
Confidence 999999999999999999999999999988864311 01111111000 0000 01122345
Q ss_pred HHHhhccCCCCCCCCCHHHHHH
Q 005040 679 DLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 679 ~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
+++..||+++|.+||++.|+++
T Consensus 243 ~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 243 SFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHHHhCCCChhhCcChHHHhh
Confidence 7888999999999999999975
No 414
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.92 E-value=1.8e-24 Score=240.49 Aligned_cols=263 Identities=27% Similarity=0.363 Sum_probs=211.8
Q ss_pred CCCcEEECCCCcceecCCcCCCCCCCCCEEEcccccccCccCCcccccccccccCccCCcEEeccCCCCcccCCcchhcc
Q 005040 12 TKLIGLDLGLNSFSGHIPNTFGNLRHLSVLSLMMNNLTTESSSADQWSFLSSLTNCRNLANLALASNPLGGILPPLIGNF 91 (717)
Q Consensus 12 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 91 (717)
..-..|+|++|+++ .+|..+. ++|+.|++++|+|+.++. ..++|++|+|++|+|+. +|. +
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~LP~------------lp~~Lk~LdLs~N~Lts-LP~----l 260 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTSLPA------------LPPELRTLEVSGNQLTS-LPV----L 260 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCCCCC------------CCCCCcEEEecCCccCc-ccC----c
Confidence 34567999999999 5777775 489999999999998763 24789999999999995 453 3
Q ss_pred ccccceeeecCCcceecCCccccCCCCCcEEEccCCCCcccCCccccccCCCCEEeccCCcccccCCccccCCCCCCEEe
Q 005040 92 SASLQNIYAFECKLGGSIPKEIGNLRGLIVLSLGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPHDLCHLERLNILN 171 (717)
Q Consensus 92 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~ 171 (717)
+++|++|++++|.+. .+|..+ .+|+.|+|++|+++. +|. .+++|+.|+|++|+|+++ |.. ..+|+.|+
T Consensus 261 p~sL~~L~Ls~N~L~-~Lp~lp---~~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L~~L-p~l---p~~L~~L~ 328 (788)
T PRK15387 261 PPGLLELSIFSNPLT-HLPALP---SGLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLASL-PAL---PSELCKLW 328 (788)
T ss_pred ccccceeeccCCchh-hhhhch---hhcCEEECcCCcccc-ccc---cccccceeECCCCccccC-CCC---cccccccc
Confidence 468999999999998 445433 578899999999994 454 357899999999999964 432 24688999
Q ss_pred ccCCcCcccCCccccCCCCCCeEEecCccccCCCChhhhcccCCCeEEccCCcCcccCCccccCCCCCCeEEccCCCCCC
Q 005040 172 LSGNKLSGAIPQCLASLTSLRSLYLQSNKLSSSLPSSLWSLEYILRINLSSNSLKGTLPSNIQKLNVLIDLDLSRNQLSS 251 (717)
Q Consensus 172 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 251 (717)
+++|+|+. +|.. ..+|+.|+|++|+|++ +|.. ..+|+.|++++|.|++ +|.. ..+|+.|++++|.|++
T Consensus 329 Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~ 396 (788)
T PRK15387 329 AYNNQLTS-LPTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS 396 (788)
T ss_pred cccCcccc-cccc---ccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCcccC
Confidence 99999984 5532 2579999999999994 5543 3578899999999994 5543 3579999999999996
Q ss_pred CCcccccCCcccccccccCccccCCCCccccccCccceEeccCCCCCCCCcccccccccccEEEccCCcccccccc
Q 005040 252 DIPSTIGTLKNLETLSLAGNQFQGPIPESVGNLISLESLDFSNNNLSGKIPKSLEALSHLKQFNVSHNRLEGEIPV 327 (717)
Q Consensus 252 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 327 (717)
+|.. .++|+.|++++|+++. +|... .+|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+.
T Consensus 397 -LP~l---~s~L~~LdLS~N~Lss-IP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~ 463 (788)
T PRK15387 397 -LPVL---PSELKELMVSGNRLTS-LPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 463 (788)
T ss_pred -CCCc---ccCCCEEEccCCcCCC-CCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHH
Confidence 5543 3689999999999984 66543 46889999999998 7899999999999999999999987765
No 415
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.92 E-value=4.8e-27 Score=229.39 Aligned_cols=318 Identities=19% Similarity=0.218 Sum_probs=201.1
Q ss_pred CCCCccccCCCCCcEEECCCCcceecCCcCCCCCCCCCEEEcccccccCccCCcccccccccccCccCCcEEeccC-CCC
Q 005040 2 GTIPNSITNATKLIGLDLGLNSFSGHIPNTFGNLRHLSVLSLMMNNLTTESSSADQWSFLSSLTNCRNLANLALAS-NPL 80 (717)
Q Consensus 2 ~~iP~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~-N~l 80 (717)
.+||..++.-+ +.++|..|.|+.+.+.+|+.+++|+.||||+|.|+.|.+.+ |.++++|.+|.+.+ |+|
T Consensus 59 ~eVP~~LP~~t--veirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~A--------F~GL~~l~~Lvlyg~NkI 128 (498)
T KOG4237|consen 59 TEVPANLPPET--VEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDA--------FKGLASLLSLVLYGNNKI 128 (498)
T ss_pred ccCcccCCCcc--eEEEeccCCcccCChhhccchhhhceecccccchhhcChHh--------hhhhHhhhHHHhhcCCch
Confidence 45566555544 44666666666666666666666666666666666665444 55666655555444 566
Q ss_pred cccCCcchhccccccceeeecCCcceecCCccccCCCCCcEEEccCCCCcccCCccccccCCCCEEeccCCcccccCCcc
Q 005040 81 GGILPPLIGNFSASLQNIYAFECKLGGSIPKEIGNLRGLIVLSLGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPHD 160 (717)
Q Consensus 81 ~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~ 160 (717)
+...-..|..+ .+|+.|.+.-|++.-+..+.|..|++|..|.+-+|.+..+--.+|..+..++++.+..|.+..
T Consensus 129 ~~l~k~~F~gL-~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~ic----- 202 (498)
T KOG4237|consen 129 TDLPKGAFGGL-SSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFIC----- 202 (498)
T ss_pred hhhhhhHhhhH-HHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccc-----
Confidence 54444444444 345555555555554444555555555555555555543333345555555555555444321
Q ss_pred ccCCCCCCEEeccCCcCcccCCccccCCCCCCeEEecCccccCCCChhhhcc-cCCCeEEccCCcCcccCC-ccccCCCC
Q 005040 161 LCHLERLNILNLSGNKLSGAIPQCLASLTSLRSLYLQSNKLSSSLPSSLWSL-EYILRINLSSNSLKGTLP-SNIQKLNV 238 (717)
Q Consensus 161 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~l~~N~l~~~~~-~~~~~l~~ 238 (717)
.++++.+.. +....|..++......-..|.++++..+.+..|... ..+..=-.+.+...+..| ..|..+++
T Consensus 203 dCnL~wla~-------~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~ 275 (498)
T KOG4237|consen 203 DCNLPWLAD-------DLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPN 275 (498)
T ss_pred ccccchhhh-------HHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhccc
Confidence 122222211 111233445556666666677777765555544322 222211122222332333 46899999
Q ss_pred CCeEEccCCCCCCCCcccccCCcccccccccCccccCCCCccccccCccceEeccCCCCCCCCcccccccccccEEEccC
Q 005040 239 LIDLDLSRNQLSSDIPSTIGTLKNLETLSLAGNQFQGPIPESVGNLISLESLDFSNNNLSGKIPKSLEALSHLKQFNVSH 318 (717)
Q Consensus 239 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~~~~~~~~~~l~~L~~L~l~~ 318 (717)
|+.|+|++|+|+++.+.+|.+...|++|.|..|+|..+-...|.++..|+.|+|.+|+|+...|..|..+..|.+|+|-.
T Consensus 276 L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~ 355 (498)
T KOG4237|consen 276 LRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLS 355 (498)
T ss_pred ceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehcc
Confidence 99999999999999899999999999999999999877777889999999999999999999999999999999999999
Q ss_pred CcccccccccccccccccccccCC
Q 005040 319 NRLEGEIPVKGSFKDFSAQSYFGN 342 (717)
Q Consensus 319 N~l~~~~p~~~~~~~~~~~~~~~n 342 (717)
|++.+.+...+..+++...+..|+
T Consensus 356 Np~~CnC~l~wl~~Wlr~~~~~~~ 379 (498)
T KOG4237|consen 356 NPFNCNCRLAWLGEWLRKKSVVGN 379 (498)
T ss_pred CcccCccchHHHHHHHhhCCCCCC
Confidence 999998877666666666554443
No 416
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.91 E-value=5.9e-24 Score=236.38 Aligned_cols=256 Identities=28% Similarity=0.394 Sum_probs=206.2
Q ss_pred CCCCCccccCCCCCcEEECCCCcceecCCcCCCCCCCCCEEEcccccccCccCCcccccccccccCccCCcEEeccCCCC
Q 005040 1 MGTIPNSITNATKLIGLDLGLNSFSGHIPNTFGNLRHLSVLSLMMNNLTTESSSADQWSFLSSLTNCRNLANLALASNPL 80 (717)
Q Consensus 1 ~~~iP~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l 80 (717)
+++||..+.. +|+.|++++|+|+. +|. .+++|++|+|++|+|+.++. ..++|+.|+|++|.+
T Consensus 213 LtsLP~~l~~--~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~LtsLP~------------lp~sL~~L~Ls~N~L 274 (788)
T PRK15387 213 LTTLPDCLPA--HITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTSLPV------------LPPGLLELSIFSNPL 274 (788)
T ss_pred CCcCCcchhc--CCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccCcccC------------cccccceeeccCCch
Confidence 4679998874 89999999999995 564 36899999999999998763 136899999999999
Q ss_pred cccCCcchhccccccceeeecCCcceecCCccccCCCCCcEEEccCCCCcccCCccccccCCCCEEeccCCcccccCCcc
Q 005040 81 GGILPPLIGNFSASLQNIYAFECKLGGSIPKEIGNLRGLIVLSLGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPHD 160 (717)
Q Consensus 81 ~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~ 160 (717)
+. +|. ++.+|+.|++++|+++. +|. .+++|++|+|++|+|+. +|.. ..+|+.|++++|+|+.+ |..
T Consensus 275 ~~-Lp~----lp~~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~~L-P~l 340 (788)
T PRK15387 275 TH-LPA----LPSGLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTSL-PTL 340 (788)
T ss_pred hh-hhh----chhhcCEEECcCCcccc-ccc---cccccceeECCCCcccc-CCCC---cccccccccccCccccc-ccc
Confidence 84 443 33679999999999984 554 34789999999999995 4442 34688999999999954 432
Q ss_pred ccCCCCCCEEeccCCcCcccCCccccCCCCCCeEEecCccccCCCChhhhcccCCCeEEccCCcCcccCCccccCCCCCC
Q 005040 161 LCHLERLNILNLSGNKLSGAIPQCLASLTSLRSLYLQSNKLSSSLPSSLWSLEYILRINLSSNSLKGTLPSNIQKLNVLI 240 (717)
Q Consensus 161 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 240 (717)
..+|+.|+|++|+|+. +|.. ..+|+.|++++|+|++ +|.. ..+|+.|+|++|+|++ +|.. .++|+
T Consensus 341 ---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~ 405 (788)
T PRK15387 341 ---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LPVL---PSELK 405 (788)
T ss_pred ---ccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCcccC-CCCc---ccCCC
Confidence 2589999999999995 5543 3578899999999994 5653 3579999999999994 5543 36799
Q ss_pred eEEccCCCCCCCCcccccCCcccccccccCccccCCCCccccccCccceEeccCCCCCCCCccccccc
Q 005040 241 DLDLSRNQLSSDIPSTIGTLKNLETLSLAGNQFQGPIPESVGNLISLESLDFSNNNLSGKIPKSLEAL 308 (717)
Q Consensus 241 ~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~~~~~~~~~~l 308 (717)
.|++++|.|++ +|.. ..+|+.|++++|+|+ .+|..+.++++|+.|+|++|++++..+..+..+
T Consensus 406 ~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~l 468 (788)
T PRK15387 406 ELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 468 (788)
T ss_pred EEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHHHH
Confidence 99999999996 5653 357899999999998 689999999999999999999998877766443
No 417
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.91 E-value=1.4e-26 Score=226.16 Aligned_cols=277 Identities=22% Similarity=0.239 Sum_probs=204.0
Q ss_pred CCCCC-ccccCCCCCcEEECCCCcceecCCcCCCCCCCCCEEEccc-ccccCccCCcccccccccccCccCCcEEeccCC
Q 005040 1 MGTIP-NSITNATKLIGLDLGLNSFSGHIPNTFGNLRHLSVLSLMM-NNLTTESSSADQWSFLSSLTNCRNLANLALASN 78 (717)
Q Consensus 1 ~~~iP-~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N 78 (717)
|.+|| ..|+.+.+|+.||||+|+|+.+.|++|.+|++|.+|-+-+ |+|++++.++ |.+|..|+.|.+.-|
T Consensus 79 I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~--------F~gL~slqrLllNan 150 (498)
T KOG4237|consen 79 ISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGA--------FGGLSSLQRLLLNAN 150 (498)
T ss_pred cccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhH--------hhhHHHHHHHhcChh
Confidence 56787 7899999999999999999999999999999998886666 9999999877 999999999999999
Q ss_pred CCcccCCcchhccccccceeeecCCcceecCCccccCCCCCcEEEccCCCCcccCCccccccCCCCEEeccCCcccccCC
Q 005040 79 PLGGILPPLIGNFSASLQNIYAFECKLGGSIPKEIGNLRGLIVLSLGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVP 158 (717)
Q Consensus 79 ~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~ 158 (717)
++.-+..+.|.++ ++|..|.+.+|.+..+--.+|..+..++.+.+..|.+. ...+++.|..- +.. .|
T Consensus 151 ~i~Cir~~al~dL-~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~i-----cdCnL~wla~~-~a~------~~ 217 (498)
T KOG4237|consen 151 HINCIRQDALRDL-PSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFI-----CDCNLPWLADD-LAM------NP 217 (498)
T ss_pred hhcchhHHHHHHh-hhcchhcccchhhhhhccccccchhccchHhhhcCccc-----cccccchhhhH-Hhh------ch
Confidence 9999999999998 67999999999999666669999999999999999854 22344433322 111 22
Q ss_pred ccccCCCCCCEEeccCCcCcccCCccccCC-CCCCeEEecCccccCC-CChhhhcccCCCeEEccCCcCcccCCccccCC
Q 005040 159 HDLCHLERLNILNLSGNKLSGAIPQCLASL-TSLRSLYLQSNKLSSS-LPSSLWSLEYILRINLSSNSLKGTLPSNIQKL 236 (717)
Q Consensus 159 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l-~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 236 (717)
..++...-..-..+.++++..+.+..|... .++..=..+.+...++ ....|..+++|+.|+|++|+|+.+-+.+|.++
T Consensus 218 ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~ 297 (498)
T KOG4237|consen 218 IETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGA 297 (498)
T ss_pred hhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcch
Confidence 233444444555555555554444433321 1221112222222223 33457777777777777777777777777777
Q ss_pred CCCCeEEccCCCCCCCCcccccCCcccccccccCccccCCCCccccccCccceEeccCCCCC
Q 005040 237 NVLIDLDLSRNQLSSDIPSTIGTLKNLETLSLAGNQFQGPIPESVGNLISLESLDFSNNNLS 298 (717)
Q Consensus 237 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 298 (717)
..+++|.|..|+|..+....|.++..|+.|+|.+|+|+...|.+|..+..|.+|+|-.|++.
T Consensus 298 a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~ 359 (498)
T KOG4237|consen 298 AELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFN 359 (498)
T ss_pred hhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCccc
Confidence 77888888888777666667777788888888888887777777777777888888777765
No 418
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.91 E-value=5e-25 Score=204.67 Aligned_cols=249 Identities=23% Similarity=0.351 Sum_probs=189.0
Q ss_pred cCCccccccccccEEEEEEEecCCCeEEEEEechhh--HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEcc
Q 005040 428 EFNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQL--ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFM 505 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 505 (717)
+.....+|.+...|..|+|+++ |..+++|++.... ....++|..|.-.++-..||||+.++|.|....+..++..||
T Consensus 191 ~lnl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~m 269 (448)
T KOG0195|consen 191 SLNLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYM 269 (448)
T ss_pred hhhhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeec
Confidence 3445567889999999999996 5567778876543 233467888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEe--eeccccccCCCC
Q 005040 506 PNGSLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVS--DFGISKLLGEGE 582 (717)
Q Consensus 506 ~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~--Dfgl~~~~~~~~ 582 (717)
+.|+|+..+++. +...+..++.+++.++++|++|||... +-|-.--+.+..|++|++.+++|+ |--++
T Consensus 270 p~gslynvlhe~t~vvvd~sqav~faldiargmaflhsle--p~ipr~~lns~hvmidedltarismad~kfs------- 340 (448)
T KOG0195|consen 270 PFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE--PMIPRFYLNSKHVMIDEDLTARISMADTKFS------- 340 (448)
T ss_pred cchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc--hhhhhhhcccceEEecchhhhheecccceee-------
Confidence 999999999975 344678899999999999999999764 223334588999999999988875 22211
Q ss_pred CceeeeccccCccccCCCccCCCCc---CcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhcccc
Q 005040 583 DSVIQTMTMATIGYMAPEYGSEGIV---STKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDAN 659 (717)
Q Consensus 583 ~~~~~~~~~~t~~y~aPE~~~~~~~---~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (717)
.......-.+.||+||.++.++- -.++|+|||++++||+.|...||.+..+-+--+.-. + ..
T Consensus 341 --fqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkia------------l-eg 405 (448)
T KOG0195|consen 341 --FQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIA------------L-EG 405 (448)
T ss_pred --eeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhh------------h-cc
Confidence 11223345788999998887664 357999999999999999999998754322111100 0 00
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhH
Q 005040 660 LVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIK 706 (717)
Q Consensus 660 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~ 706 (717)
+. ...+...+..+.+++.-|+..||.+||.+..++-.|+++.
T Consensus 406 lr-----v~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 406 LR-----VHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred cc-----ccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 10 0112234566789999999999999999999999999864
No 419
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.90 E-value=7.1e-23 Score=245.76 Aligned_cols=311 Identities=23% Similarity=0.279 Sum_probs=171.6
Q ss_pred cccCCCCCcEEECCCCc------ceecCCcCCCCCC-CCCEEEcccccccCccCCcccccccccccCccCCcEEeccCCC
Q 005040 7 SITNATKLIGLDLGLNS------FSGHIPNTFGNLR-HLSVLSLMMNNLTTESSSADQWSFLSSLTNCRNLANLALASNP 79 (717)
Q Consensus 7 ~~~~l~~L~~L~L~~n~------i~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~ 79 (717)
.|..+.+|+.|.+..+. +...+|+.|..++ +|+.|.+.+|.++.+|.. | ...+|++|+|++|+
T Consensus 553 aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~~lP~~---------f-~~~~L~~L~L~~s~ 622 (1153)
T PLN03210 553 AFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCMPSN---------F-RPENLVKLQMQGSK 622 (1153)
T ss_pred HHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCCCCCCc---------C-CccCCcEEECcCcc
Confidence 35556666666654332 2223455555543 355555555555554432 1 23455555555555
Q ss_pred CcccCCcchhccccccceeeecCCcceecCCccccCCCCCcEEEccCCCCcccCCccccccCCCCEEeccCCcccccCCc
Q 005040 80 LGGILPPLIGNFSASLQNIYAFECKLGGSIPKEIGNLRGLIVLSLGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPH 159 (717)
Q Consensus 80 l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~ 159 (717)
+. .++..+..+ ++|+.|+|++|.....+| .++.+++|++|+|++|.....+|..+.++++|+.|++++|.....+|.
T Consensus 623 l~-~L~~~~~~l-~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~ 699 (1153)
T PLN03210 623 LE-KLWDGVHSL-TGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPT 699 (1153)
T ss_pred cc-ccccccccC-CCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCC
Confidence 54 334444443 345555555544333333 244555555555555443334455555555555555555432223333
Q ss_pred cccCCCCCCEEeccCCcCcccCCccccCCCCCCeEEecCccccCCCCh------------------------------hh
Q 005040 160 DLCHLERLNILNLSGNKLSGAIPQCLASLTSLRSLYLQSNKLSSSLPS------------------------------SL 209 (717)
Q Consensus 160 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~------------------------------~~ 209 (717)
.+ ++++|+.|+|++|......|.. .++|++|+|++|.+. .+|. .+
T Consensus 700 ~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~ 774 (1153)
T PLN03210 700 GI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMT 774 (1153)
T ss_pred cC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccccccccccccccccchhhccccccccchhhh
Confidence 22 4455555555554433233321 234444445444443 2222 12
Q ss_pred hcccCCCeEEccCCcCcccCCccccCCCCCCeEEccCCCCCCCCcccccCCcccccccccCccccCCCCccccccCccce
Q 005040 210 WSLEYILRINLSSNSLKGTLPSNIQKLNVLIDLDLSRNQLSSDIPSTIGTLKNLETLSLAGNQFQGPIPESVGNLISLES 289 (717)
Q Consensus 210 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 289 (717)
...++|+.|+|++|.....+|..++++++|+.|+|++|..-+.+|..+ .+++|+.|++++|.....+|.. ..+|+.
T Consensus 775 ~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~ 850 (1153)
T PLN03210 775 MLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISD 850 (1153)
T ss_pred hccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCE
Confidence 223577788888887666778888888888888888875433566554 6788888888887654444443 357888
Q ss_pred EeccCCCCCCCCcccccccccccEEEccCC-ccccccccccccccccccccc
Q 005040 290 LDFSNNNLSGKIPKSLEALSHLKQFNVSHN-RLEGEIPVKGSFKDFSAQSYF 340 (717)
Q Consensus 290 L~L~~N~~~~~~~~~~~~l~~L~~L~l~~N-~l~~~~p~~~~~~~~~~~~~~ 340 (717)
|+|++|.+. .+|.++..+++|+.|+|++| ++.+..+....++.+..+.+.
T Consensus 851 L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~ 901 (1153)
T PLN03210 851 LNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFS 901 (1153)
T ss_pred eECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecC
Confidence 888888887 67888888888888888884 455433333445555444443
No 420
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.90 E-value=9.4e-23 Score=244.69 Aligned_cols=294 Identities=21% Similarity=0.266 Sum_probs=197.8
Q ss_pred CCccccCCC-CCcEEECCCCcceecCCcCCCCCCCCCEEEcccccccCccCCcccccccccccCccCCcEEeccCCCCcc
Q 005040 4 IPNSITNAT-KLIGLDLGLNSFSGHIPNTFGNLRHLSVLSLMMNNLTTESSSADQWSFLSSLTNCRNLANLALASNPLGG 82 (717)
Q Consensus 4 iP~~~~~l~-~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ 82 (717)
+|.+|..++ +|+.|++.++.++ .+|..| ...+|++|+|.+|+|..++.+ +..+++|+.|+|++|....
T Consensus 580 lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~~L~~~---------~~~l~~Lk~L~Ls~~~~l~ 648 (1153)
T PLN03210 580 LPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLEKLWDG---------VHSLTGLRNIDLRGSKNLK 648 (1153)
T ss_pred cCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCccccccccc---------cccCCCCCEEECCCCCCcC
Confidence 455555543 4666666666665 455555 356666666666666654322 4456666666666654333
Q ss_pred cCCcchhccccccceeeecCCcceecCCccccCCCCCcEEEccCCCCcccCCccccccCCCCEEeccCCcccccCCcccc
Q 005040 83 ILPPLIGNFSASLQNIYAFECKLGGSIPKEIGNLRGLIVLSLGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPHDLC 162 (717)
Q Consensus 83 ~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~ 162 (717)
.+|. +..+ ++|++|+|.+|.....+|..+.++++|+.|++++|..-..+|..+ ++++|+.|++++|......|..
T Consensus 649 ~ip~-ls~l-~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~-- 723 (1153)
T PLN03210 649 EIPD-LSMA-TNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI-- 723 (1153)
T ss_pred cCCc-cccC-CcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc--
Confidence 4443 3333 456666666665555666666666666666666643322444433 5666666666666444333321
Q ss_pred CCCCCCEEeccCCcCcccCCc------------------------------cccCCCCCCeEEecCccccCCCChhhhcc
Q 005040 163 HLERLNILNLSGNKLSGAIPQ------------------------------CLASLTSLRSLYLQSNKLSSSLPSSLWSL 212 (717)
Q Consensus 163 ~l~~L~~L~L~~n~l~~~~~~------------------------------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 212 (717)
..+|++|+|++|.+.. +|. .+...++|+.|+|++|.....+|..+.++
T Consensus 724 -~~nL~~L~L~~n~i~~-lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L 801 (1153)
T PLN03210 724 -STNISWLDLDETAIEE-FPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNL 801 (1153)
T ss_pred -cCCcCeeecCCCcccc-ccccccccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCC
Confidence 2355566666665542 222 11223578999999998877899999999
Q ss_pred cCCCeEEccCCcCcccCCccccCCCCCCeEEccCCCCCCCCcccccCCcccccccccCccccCCCCccccccCccceEec
Q 005040 213 EYILRINLSSNSLKGTLPSNIQKLNVLIDLDLSRNQLSSDIPSTIGTLKNLETLSLAGNQFQGPIPESVGNLISLESLDF 292 (717)
Q Consensus 213 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 292 (717)
++|+.|+|++|..-+.+|..+ .+++|+.|++++|..-...|.. ..+|+.|+|++|.+. .+|..+..+++|+.|+|
T Consensus 802 ~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L 876 (1153)
T PLN03210 802 HKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDM 876 (1153)
T ss_pred CCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEEC
Confidence 999999999986444677666 7899999999998655445543 468999999999998 68889999999999999
Q ss_pred cCCCCCCCCcccccccccccEEEccCCc
Q 005040 293 SNNNLSGKIPKSLEALSHLKQFNVSHNR 320 (717)
Q Consensus 293 ~~N~~~~~~~~~~~~l~~L~~L~l~~N~ 320 (717)
++|+-...+|..+..+++|+.+++++|.
T Consensus 877 ~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 877 NGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred CCCCCcCccCcccccccCCCeeecCCCc
Confidence 9964444678888999999999999985
No 421
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.90 E-value=6.1e-26 Score=243.68 Aligned_cols=302 Identities=27% Similarity=0.388 Sum_probs=194.8
Q ss_pred CCCCCccccCCCCCcEEECCCCcceecCCcCCCCCCCCCEEEcccccccCccCCcccccccccccCccCCcEEeccCCCC
Q 005040 1 MGTIPNSITNATKLIGLDLGLNSFSGHIPNTFGNLRHLSVLSLMMNNLTTESSSADQWSFLSSLTNCRNLANLALASNPL 80 (717)
Q Consensus 1 ~~~iP~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l 80 (717)
++..|..+..+.+|+.|+++.|.|. ..|.+..++.+|++|+|.+|.+...|. ++..+++|++|++++|++
T Consensus 57 ~~~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~~lP~---------~~~~lknl~~LdlS~N~f 126 (1081)
T KOG0618|consen 57 ISSFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQSLPA---------SISELKNLQYLDLSFNHF 126 (1081)
T ss_pred cccCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhhcCch---------hHHhhhcccccccchhcc
Confidence 3567888888888888888888888 677888888899999999988887654 378899999999999988
Q ss_pred cccCCcchhccc------------------cccceeeecCCcceecCCccccCCCCCcEEEccCCCCcccCCcccccc--
Q 005040 81 GGILPPLIGNFS------------------ASLQNIYAFECKLGGSIPKEIGNLRGLIVLSLGFNDLNGTIPTSIGTL-- 140 (717)
Q Consensus 81 ~~~~~~~~~~l~------------------~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l-- 140 (717)
. ..|..+..+. ..++.+++..|.+.+.++..+..+++ .|||.+|.+... .+..+
T Consensus 127 ~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~~~---dls~~~~ 200 (1081)
T KOG0618|consen 127 G-PIPLVIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEMEVL---DLSNLAN 200 (1081)
T ss_pred C-CCchhHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhhe--eeecccchhhhh---hhhhccc
Confidence 7 4454443321 12555666666666666666666666 678888777621 12222
Q ss_pred ------------------CCCCEEeccCCcccccCCccccCCCCCCEEeccCCcCcccCCccccCCCCCCeEEecCcccc
Q 005040 141 ------------------QQLQGFYVPENNLQGYVPHDLCHLERLNILNLSGNKLSGAIPQCLASLTSLRSLYLQSNKLS 202 (717)
Q Consensus 141 ------------------~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 202 (717)
++|+.|+.++|.++...+. + --.+|+++++++|+++ .+|.++..+.+|+.|...+|+++
T Consensus 201 l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~~-p-~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~ 277 (1081)
T KOG0618|consen 201 LEVLHCERNQLSELEISGPSLTALYADHNPLTTLDVH-P-VPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV 277 (1081)
T ss_pred hhhhhhhhcccceEEecCcchheeeeccCcceeeccc-c-ccccceeeecchhhhh-cchHHHHhcccceEecccchhHH
Confidence 3344444555554422111 1 1146788888888887 45577888888888888888885
Q ss_pred CCCChhhhcccCCCeEEccCCcCcccCCccccCCCCCCeEEccCCCCCCCCcccc-------------------------
Q 005040 203 SSLPSSLWSLEYILRINLSSNSLKGTLPSNIQKLNVLIDLDLSRNQLSSDIPSTI------------------------- 257 (717)
Q Consensus 203 ~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~------------------------- 257 (717)
.+|..+..+++|+.|.+..|.++ .+|....++..|+.|+|..|.|....+..+
T Consensus 278 -~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e 355 (1081)
T KOG0618|consen 278 -ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEE 355 (1081)
T ss_pred -hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccc
Confidence 56666666666666666666666 455556666666666666666653211111
Q ss_pred cCCcccccccccCccccCCCCccccccCccceEeccCCCCCCCCcccccccccccEEEccCCcccc
Q 005040 258 GTLKNLETLSLAGNQFQGPIPESVGNLISLESLDFSNNNLSGKIPKSLEALSHLKQFNVSHNRLEG 323 (717)
Q Consensus 258 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~~~~~~~~~~l~~L~~L~l~~N~l~~ 323 (717)
..++.|+.|++.+|.+++.....+.++++|+.|+|++|++.......+.++..|+.|+|+||+|+.
T Consensus 356 ~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~~ 421 (1081)
T KOG0618|consen 356 NNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLTT 421 (1081)
T ss_pred hhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhhh
Confidence 113345666666666665555556666666666666666654444455666666666666666654
No 422
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.90 E-value=3.7e-23 Score=213.25 Aligned_cols=167 Identities=23% Similarity=0.217 Sum_probs=129.8
Q ss_pred HHHhccCCccccccccccEEEEEEEec--CCCeEEEEEechh-----hHHHHHHHHHHHHHHHhcCCCceee-Eeeeeec
Q 005040 423 RRATDEFNECNLLGTGGFGSVYKGTLS--DGTNVAIKIFNLQ-----LERAFRSFDSECEILRNVRHRNLLK-ILGSCSN 494 (717)
Q Consensus 423 ~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~hpniv~-~~~~~~~ 494 (717)
+....+|+..+.||+|+||+||+|.++ +++.||||++... .....+.+.+|++++++++|+|++. ++++
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 344578999999999999999999864 5777899986532 1223466899999999999999985 4432
Q ss_pred CCeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCC-CCCCeeeCCCCcEEEeeec
Q 005040 495 LDFKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDL-KPTNILLDENMVAHVSDFG 573 (717)
Q Consensus 495 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dl-k~~Nill~~~~~~kl~Dfg 573 (717)
+..|+||||++|++|... ... . ...++.++++||.||| +.+|+|||| ||+||+++.++.+||+|||
T Consensus 91 -~~~~LVmE~~~G~~L~~~-~~~----~---~~~~~~~i~~aL~~lH----~~gIiHrDL~KP~NILv~~~~~ikLiDFG 157 (365)
T PRK09188 91 -GKDGLVRGWTEGVPLHLA-RPH----G---DPAWFRSAHRALRDLH----RAGITHNDLAKPQNWLMGPDGEAAVIDFQ 157 (365)
T ss_pred -CCcEEEEEccCCCCHHHh-Ccc----c---hHHHHHHHHHHHHHHH----HCCCeeCCCCCcceEEEcCCCCEEEEECc
Confidence 457999999999999732 111 1 1457889999999999 689999999 9999999999999999999
Q ss_pred cccccCCCCCcee------eeccccCccccCCCccCCC
Q 005040 574 ISKLLGEGEDSVI------QTMTMATIGYMAPEYGSEG 605 (717)
Q Consensus 574 l~~~~~~~~~~~~------~~~~~~t~~y~aPE~~~~~ 605 (717)
+++.+........ .....+++.|+|||++...
T Consensus 158 lA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 158 LASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred cceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 9997754432211 1344678889999976543
No 423
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=1.1e-21 Score=203.88 Aligned_cols=261 Identities=19% Similarity=0.192 Sum_probs=195.6
Q ss_pred cCCccccccccccEEEEEEEecCC--CeEEEEEechhhHHHHHHHHHHHHHHHhcCC----CceeeEeeee-ecCCeeEE
Q 005040 428 EFNECNLLGTGGFGSVYKGTLSDG--TNVAIKIFNLQLERAFRSFDSECEILRNVRH----RNLLKILGSC-SNLDFKAL 500 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~~~--~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h----pniv~~~~~~-~~~~~~~l 500 (717)
+|.+.+.||+|+||.||.+..... ..+|+|.-..........+..|..++..+.. +++..+++.. ......|+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 899999999999999999997543 4788887765433222267778999998863 6899999988 57778899
Q ss_pred EEEccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCC-----CcEEEeeecc
Q 005040 501 VLEFMPNGSLEKWLYSHN-YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDEN-----MVAHVSDFGI 574 (717)
Q Consensus 501 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~-----~~~kl~Dfgl 574 (717)
||+.+ |.+|.++..... ..++..++..++.|++.+|+++| +.|++||||||.|+.+... -.+.+.|||+
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH----~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl 173 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLH----SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGL 173 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHH----hcCcccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence 99988 779999886554 67999999999999999999999 7899999999999999865 4699999999
Q ss_pred cc--ccCCCCCc----e-e-eeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHh
Q 005040 575 SK--LLGEGEDS----V-I-QTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKE 646 (717)
Q Consensus 575 ~~--~~~~~~~~----~-~-~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~ 646 (717)
++ .+...... . . .....||..|.++....+...+.+.|+||++.++.|+..|..||........ .......
T Consensus 174 ar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-~~~~~~~ 252 (322)
T KOG1164|consen 174 ARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-KSKFEKD 252 (322)
T ss_pred CccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-HHHHHHH
Confidence 98 33211110 1 1 1234599999999999999999999999999999999999999965332211 1111110
Q ss_pred hCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHh
Q 005040 647 SLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKAK 708 (717)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~~ 708 (717)
..... ... .....+.++.++...+-..+..++|....+...+++....
T Consensus 253 ~~~~~----~~~----------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 253 PRKLL----TDR----------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred hhhhc----ccc----------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 00000 000 0011234566666667678999999999999998877554
No 424
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.87 E-value=8.4e-23 Score=224.87 Aligned_cols=253 Identities=21% Similarity=0.212 Sum_probs=187.9
Q ss_pred ccccccccccEEEEEEEec-CCCeEEEEEec----hh-hHHH-HHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEE
Q 005040 431 ECNLLGTGGFGSVYKGTLS-DGTNVAIKIFN----LQ-LERA-FRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLE 503 (717)
Q Consensus 431 ~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~----~~-~~~~-~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 503 (717)
....+|.|++|.|+.+... ....++.|.+. .. .... ...+..|+-+-..++|||++..+..+.+....+-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 4578999999988877643 44444554332 11 1111 1225667777888899999999888877776666699
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 504 FMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 504 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
||++ ||..++... .++....+..+++|+..|++|+| +.|+.|||+|++|++++.+|.+||+|||.+.....+..
T Consensus 402 ~~~~-Dlf~~~~~~-~~~~~~e~~c~fKqL~~Gv~y~h----~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSN-GKLTPLEADCFFKQLLRGVKYLH----SMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred cccH-HHHHHHhcc-cccchhhhhHHHHHHHHHHHHHH----hcCceeccCccccEEEecCCceEEeecCcceeeccCcc
Confidence 9999 999999875 34788889999999999999999 78999999999999999999999999999876654433
Q ss_pred c--eeeeccccCccccCCCccCCCCcCc-ccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccc
Q 005040 584 S--VIQTMTMATIGYMAPEYGSEGIVST-KCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANL 660 (717)
Q Consensus 584 ~--~~~~~~~~t~~y~aPE~~~~~~~~~-~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (717)
. ......+|+..|+|||++.+..|.+ ..||||.|+++..|.+|+.||......+.++ ...........
T Consensus 476 ~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~---~~~~~~~~~~~------ 546 (601)
T KOG0590|consen 476 KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF---KTNNYSDQRNI------ 546 (601)
T ss_pred hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch---hhhcccccccc------
Confidence 3 4455668999999999999988865 5999999999999999999997644333322 01111111000
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 661 VREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 661 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
...........+..-..++.++++++|.+|.|++++++
T Consensus 547 --~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 547 --FEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred --ccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 00111122344566779999999999999999999875
No 425
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.87 E-value=5.8e-22 Score=222.23 Aligned_cols=247 Identities=24% Similarity=0.386 Sum_probs=152.7
Q ss_pred CCCcEEECCCCcceecCCcCCCCCCCCCEEEcccccccCccCCcccccccccccCccCCcEEeccCCCCcccCCcchhcc
Q 005040 12 TKLIGLDLGLNSFSGHIPNTFGNLRHLSVLSLMMNNLTTESSSADQWSFLSSLTNCRNLANLALASNPLGGILPPLIGNF 91 (717)
Q Consensus 12 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 91 (717)
.+.+.|+|+++.++ .+|..+. ++|+.|+|++|+|+.++... .++|++|+|++|+++ .+|..+.
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~LtsLP~~l-----------~~nL~~L~Ls~N~Lt-sLP~~l~-- 240 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELKSLPENL-----------QGNIKTLYANSNQLT-SIPATLP-- 240 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCCcCChhh-----------ccCCCEEECCCCccc-cCChhhh--
Confidence 34578888888888 4566553 47888888888888776432 247888888888887 4454432
Q ss_pred ccccceeeecCCcceecCCccccCCCCCcEEEccCCCCcccCCccccccCCCCEEeccCCcccccCCccccCCCCCCEEe
Q 005040 92 SASLQNIYAFECKLGGSIPKEIGNLRGLIVLSLGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPHDLCHLERLNILN 171 (717)
Q Consensus 92 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~ 171 (717)
.+|+.|+|++|++. .+|..+. ++|++|+|++|+|+ .+|..+. ++|+.|++++|+++.. |..+. ++|+.|+
T Consensus 241 -~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~L-P~~lp--~sL~~L~ 310 (754)
T PRK15370 241 -DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRTL-PAHLP--SGITHLN 310 (754)
T ss_pred -ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccccC-cccch--hhHHHHH
Confidence 46778888888777 5565554 46777788777777 3455443 4677777777777743 33332 3567777
Q ss_pred ccCCcCcccCCccccCCCCCCeEEecCccccCCCChhhhcccCCCeEEccCCcCcccCCccccCCCCCCeEEccCCCCCC
Q 005040 172 LSGNKLSGAIPQCLASLTSLRSLYLQSNKLSSSLPSSLWSLEYILRINLSSNSLKGTLPSNIQKLNVLIDLDLSRNQLSS 251 (717)
Q Consensus 172 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 251 (717)
+++|+++. +|..+ .++|+.|++++|.+++ +|..+. ++|+.|++++|+|+ .+|..+. ++|+.|+|++|.|++
T Consensus 311 Ls~N~Lt~-LP~~l--~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt~ 381 (754)
T PRK15370 311 VQSNSLTA-LPETL--PPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALTN 381 (754)
T ss_pred hcCCcccc-CCccc--cccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCCC
Confidence 77777763 34322 2567777777777763 444432 56666777777666 3444332 456666666666664
Q ss_pred CCcccccCCcccccccccCccccCCCCccc----cccCccceEeccCCCCC
Q 005040 252 DIPSTIGTLKNLETLSLAGNQFQGPIPESV----GNLISLESLDFSNNNLS 298 (717)
Q Consensus 252 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~----~~l~~L~~L~L~~N~~~ 298 (717)
+|..+. ..|+.|++++|++. .+|..+ +.++++..|+|.+|+++
T Consensus 382 -LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 382 -LPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred -CCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 343332 24666666666665 334332 22345555555555554
No 426
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.87 E-value=1.4e-20 Score=198.38 Aligned_cols=258 Identities=30% Similarity=0.397 Sum_probs=198.9
Q ss_pred CCccccccccccEEEEEEEecCCCeEEEEEechhhHH---HHHHHHHHHHHHHhcCCC-ceeeEeeeeecCCeeEEEEEc
Q 005040 429 FNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLER---AFRSFDSECEILRNVRHR-NLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 429 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~hp-niv~~~~~~~~~~~~~lv~e~ 504 (717)
|...+.||.|+||.||++... ..+++|.+...... ....+.+|+.+++.+.|+ +++++.+.+......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 667789999999999999986 78899998766532 467789999999999988 799999999877778999999
Q ss_pred cCCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC-cEEEeeeccccccCCC
Q 005040 505 MPNGSLEKWLYSHN--YFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENM-VAHVSDFGISKLLGEG 581 (717)
Q Consensus 505 ~~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfgl~~~~~~~ 581 (717)
+.++++.+++.... ..++......++.|++.++.|+| +.+++|||+||+||+++..+ .++++|||.+......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H----~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH----SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence 99999997777654 25889999999999999999999 67899999999999999988 7999999999866543
Q ss_pred CCce----eeeccccCccccCCCccCC---CCcCcccchhhHHHHHHHHHhCCCCCCccccC--cchHHHHHHhhCCCch
Q 005040 582 EDSV----IQTMTMATIGYMAPEYGSE---GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTG--EMSLRRWVKESLPHRL 652 (717)
Q Consensus 582 ~~~~----~~~~~~~t~~y~aPE~~~~---~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~ 652 (717)
.... ......|+..|+|||...+ ..++...|+|++|++++++++|..||...... .......+........
T Consensus 156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (384)
T COG0515 156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSL 235 (384)
T ss_pred CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCccc
Confidence 3221 2355679999999998887 67899999999999999999999997653221 1122222221111100
Q ss_pred hhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 653 TEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
......... ......+.+++..|+..+|..|.++.+....
T Consensus 236 ~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 236 ASPLSPSNP---------ELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ccccCcccc---------chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 000000000 1223457799999999999999998887764
No 427
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=9.8e-22 Score=180.04 Aligned_cols=264 Identities=18% Similarity=0.191 Sum_probs=198.8
Q ss_pred HhccCCccccccccccEEEEEEE-ecCCCeEEEEEechhhHHHHHHHHHHHHHHHhcCC-CceeeEeeeeecCCeeEEEE
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGT-LSDGTNVAIKIFNLQLERAFRSFDSECEILRNVRH-RNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-pniv~~~~~~~~~~~~~lv~ 502 (717)
..++|..+++||.|+||.+|.|. ..+|..||+|+=...++. ..+..|.++++.+++ ..|..+..+..+..+-.+||
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC--cchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 35789999999999999999998 468999999986544432 456779999999964 67878888888888889999
Q ss_pred EccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCC---CCcEEEeeeccccccC
Q 005040 503 EFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDE---NMVAHVSDFGISKLLG 579 (717)
Q Consensus 503 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfgl~~~~~ 579 (717)
|.+ |.+|.+...-....++..++...+-|++.-++|+| .++++||||||+|.|..- ...+.++|||+|+.+.
T Consensus 91 dLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH----~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~ 165 (341)
T KOG1163|consen 91 DLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVH----LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR 165 (341)
T ss_pred ecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHH----hhccccccCCccceeeccccccceEEEEeccchhhhc
Confidence 998 77999999877777999999999999999999999 678999999999999963 4468999999999875
Q ss_pred CCCCc-----eeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhh
Q 005040 580 EGEDS-----VIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTE 654 (717)
Q Consensus 580 ~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (717)
..... .......||..|.+-....+..-+.+.|+=|+|.++.++.-|..||.+...... ..+ .+.
T Consensus 166 d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk-~QK---------yEk 235 (341)
T KOG1163|consen 166 DIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATK-KQK---------YEK 235 (341)
T ss_pred cccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhH-HHH---------HHH
Confidence 43322 122345689999988877777778899999999999999999999987533211 011 111
Q ss_pred hccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHH
Q 005040 655 VVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKA 707 (717)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~ 707 (717)
+.+..+..... .-...++.++.-.+..|-..--++-|...=+.+..+-+.+
T Consensus 236 I~EkK~s~~ie--~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr 286 (341)
T KOG1163|consen 236 ISEKKMSTPIE--VLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFR 286 (341)
T ss_pred HHHhhcCCCHH--HHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHh
Confidence 11111111111 1122445667777788888788888887766666655544
No 428
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=1.8e-20 Score=179.73 Aligned_cols=262 Identities=16% Similarity=0.158 Sum_probs=199.9
Q ss_pred ccCCccccccccccEEEEEEEe-cCCCeEEEEEechhhHHHHHHHHHHHHHHHhc-CCCceeeEeeeeecCCeeEEEEEc
Q 005040 427 DEFNECNLLGTGGFGSVYKGTL-SDGTNVAIKIFNLQLERAFRSFDSECEILRNV-RHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
-.|.+.++||+|.||.++.|+. -++++||||.=.... ...++..|.+.++.| ..++|...+.+-.++.+-.||+|.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidL 105 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDL 105 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhh
Confidence 4788999999999999999984 489999999644332 224567799999988 579999999998888888999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC-----cEEEeeeccccccC
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENM-----VAHVSDFGISKLLG 579 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~-----~~kl~Dfgl~~~~~ 579 (717)
+ |.+|+|...=+++.++.+++..+|.|++.-++|+| ++..|.|||||+|+||...+ .+.++|||+|+.+.
T Consensus 106 L-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH----~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Yr 180 (449)
T KOG1165|consen 106 L-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVH----EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYR 180 (449)
T ss_pred h-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHH----hcceeecccCccceeecCCCCCCCceEEEEeccchhhhc
Confidence 8 77999999988888999999999999999999999 67899999999999997543 58999999999887
Q ss_pred CCCCce-----eeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhh
Q 005040 580 EGEDSV-----IQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTE 654 (717)
Q Consensus 580 ~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (717)
...+.. ......||..||+--...+..-+.+-|+=|+|=++++.+-|..||.+..... .-.++-+.-...+...
T Consensus 181 Dp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~t-nK~kYeKIGe~Kr~T~ 259 (449)
T KOG1165|consen 181 DPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADT-NKEKYEKIGETKRSTP 259 (449)
T ss_pred CccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcc-hHHHHHHhccccccCC
Confidence 654321 2234469999999999889999999999999999999999999998853321 1112211111111000
Q ss_pred hccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHH
Q 005040 655 VVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKA 707 (717)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~ 707 (717)
+ ..-...++.++..-+...-+.+-.+-|..+=+...+..+..
T Consensus 260 i-----------~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvld 301 (449)
T KOG1165|consen 260 I-----------EVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLD 301 (449)
T ss_pred H-----------HHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 0 01112345556666666666677888887777666666544
No 429
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.85 E-value=7.9e-22 Score=221.11 Aligned_cols=253 Identities=25% Similarity=0.402 Sum_probs=197.2
Q ss_pred CCCCCccccCCCCCcEEECCCCcceecCCcCCCCCCCCCEEEcccccccCccCCcccccccccccCccCCcEEeccCCCC
Q 005040 1 MGTIPNSITNATKLIGLDLGLNSFSGHIPNTFGNLRHLSVLSLMMNNLTTESSSADQWSFLSSLTNCRNLANLALASNPL 80 (717)
Q Consensus 1 ~~~iP~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l 80 (717)
++++|..+. +.|+.|+|++|+|+. +|..+. ++|++|+|++|+++.++.. + ..+|+.|+|++|.+
T Consensus 190 LtsLP~~Ip--~~L~~L~Ls~N~Lts-LP~~l~--~nL~~L~Ls~N~LtsLP~~---------l--~~~L~~L~Ls~N~L 253 (754)
T PRK15370 190 LTTIPACIP--EQITTLILDNNELKS-LPENLQ--GNIKTLYANSNQLTSIPAT---------L--PDTIQEMELSINRI 253 (754)
T ss_pred cCcCCcccc--cCCcEEEecCCCCCc-CChhhc--cCCCEEECCCCccccCChh---------h--hccccEEECcCCcc
Confidence 467888775 479999999999994 566554 5899999999999987643 2 24799999999999
Q ss_pred cccCCcchhccccccceeeecCCcceecCCccccCCCCCcEEEccCCCCcccCCccccccCCCCEEeccCCcccccCCcc
Q 005040 81 GGILPPLIGNFSASLQNIYAFECKLGGSIPKEIGNLRGLIVLSLGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPHD 160 (717)
Q Consensus 81 ~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~ 160 (717)
. .+|..+. .+|+.|++++|++. .+|..+. ++|++|+|++|+++. +|..+. ++|+.|++++|+++.. |..
T Consensus 254 ~-~LP~~l~---s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~L-P~~ 322 (754)
T PRK15370 254 T-ELPERLP---SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTAL-PET 322 (754)
T ss_pred C-cCChhHh---CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCccccC-Ccc
Confidence 8 5666553 57999999999999 5677664 589999999999995 454443 5799999999999954 443
Q ss_pred ccCCCCCCEEeccCCcCcccCCccccCCCCCCeEEecCccccCCCChhhhcccCCCeEEccCCcCcccCCccccCCCCCC
Q 005040 161 LCHLERLNILNLSGNKLSGAIPQCLASLTSLRSLYLQSNKLSSSLPSSLWSLEYILRINLSSNSLKGTLPSNIQKLNVLI 240 (717)
Q Consensus 161 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 240 (717)
+. ++|+.|++++|.++. +|..+. ++|+.|+|++|+|+ .+|..+ .++|+.|+|++|.|+ .+|..+. ..|+
T Consensus 323 l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~l--p~~L~~LdLs~N~Lt-~LP~~l~--~sL~ 391 (754)
T PRK15370 323 LP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETL--PPTITTLDVSRNALT-NLPENLP--AALQ 391 (754)
T ss_pred cc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhh--cCCcCEEECCCCcCC-CCCHhHH--HHHH
Confidence 32 689999999999995 665553 79999999999998 566655 368999999999999 4565554 3699
Q ss_pred eEEccCCCCCCCCccc----ccCCcccccccccCccccCCCCccccccCccceEeccCCCCCC
Q 005040 241 DLDLSRNQLSSDIPST----IGTLKNLETLSLAGNQFQGPIPESVGNLISLESLDFSNNNLSG 299 (717)
Q Consensus 241 ~L~l~~N~l~~~~~~~----~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~~ 299 (717)
.|++++|+|++ +|.. ++.++++..|++.+|++.. ..+.+|+.| ++.+.+.|
T Consensus 392 ~LdLs~N~L~~-LP~sl~~~~~~~~~l~~L~L~~Npls~------~tl~~L~~L-l~s~~~~g 446 (754)
T PRK15370 392 IMQASRNNLVR-LPESLPHFRGEGPQPTRIIVEYNPFSE------RTIQNMQRL-MSSVGYQG 446 (754)
T ss_pred HHhhccCCccc-CchhHHHHhhcCCCccEEEeeCCCccH------HHHHHHHHh-hhcccccC
Confidence 99999999985 5544 3446889999999999972 344556556 44555543
No 430
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.84 E-value=4.6e-21 Score=183.29 Aligned_cols=172 Identities=12% Similarity=0.134 Sum_probs=133.2
Q ss_pred HHhccCCccccccccccEEEEEEEecCCCeEEEEEechhhHHH---HH------HHHHHHHHHHhcCCCceeeEeeeeec
Q 005040 424 RATDEFNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLERA---FR------SFDSECEILRNVRHRNLLKILGSCSN 494 (717)
Q Consensus 424 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~---~~------~~~~e~~~l~~l~hpniv~~~~~~~~ 494 (717)
...++|...+.+|.|+||.||.+.. ++..+|+|++....... .. .+.+|++.++++.||+|..+.+++..
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 3468999999999999999999766 57789999997553221 12 26789999999999999999988653
Q ss_pred C--------CeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCc
Q 005040 495 L--------DFKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMV 566 (717)
Q Consensus 495 ~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~ 566 (717)
. ...++||||++|.+|.++.. ++. ....+++.++..+| ..+++|||++|+||++++++
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~lH----~~gi~H~Dikp~Nili~~~g- 172 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESLH----QHGMVSGDPHKGNFIVSKNG- 172 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHHH----HcCCccCCCChHHEEEeCCC-
Confidence 3 35789999999999988732 222 24568999999999 68999999999999999998
Q ss_pred EEEeeeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHH
Q 005040 567 AHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETF 624 (717)
Q Consensus 567 ~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~ 624 (717)
++++|||........... ..+.....|..++|+|+||+.+..+.
T Consensus 173 i~liDfg~~~~~~e~~a~--------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 173 LRIIDLSGKRCTAQRKAK--------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEEECCCcccccchhhH--------------HHHHHHhHhcccccccceeEeehHHH
Confidence 999999987654221110 01334445668999999999987654
No 431
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.83 E-value=2.1e-20 Score=195.87 Aligned_cols=218 Identities=26% Similarity=0.352 Sum_probs=166.6
Q ss_pred HHhcCCCceeeEeeeeecCCeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCC
Q 005040 477 LRNVRHRNLLKILGSCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKP 556 (717)
Q Consensus 477 l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~ 556 (717)
|+.+.|.|+.+++|.+.++...+.|.+||..|+|.+.+......+++.....++++++.||.|+|. +.--.|+.+++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~---s~i~~hg~l~s 77 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHN---SPIGYHGALKS 77 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhc---Ccceeeeeecc
Confidence 356899999999999999999999999999999999999887789999999999999999999994 33349999999
Q ss_pred CCeeeCCCCcEEEeeeccccccCCCCCceeeeccccCccccCCCccCCC-------CcCcccchhhHHHHHHHHHhCCCC
Q 005040 557 TNILLDENMVAHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEG-------IVSTKCDVYSYGVLLMETFTEKKP 629 (717)
Q Consensus 557 ~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-------~~~~~~Dvws~G~il~el~tg~~p 629 (717)
+|.++|....+|++|||+....................-|.|||.+... ..+.++||||||++++|+++.+.|
T Consensus 78 ~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~ 157 (484)
T KOG1023|consen 78 SNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGP 157 (484)
T ss_pred ccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCc
Confidence 9999999999999999998876431111112222345569999976653 246789999999999999999999
Q ss_pred CCccccCcc--hHHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHH
Q 005040 630 TDEMFTGEM--SLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIKA 707 (717)
Q Consensus 630 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~~ 707 (717)
|+....... .+..++... ....+.+.+. ...+...++..++.+||..+|++||+++++...++.+..
T Consensus 158 ~~~~~~~~~~~eii~~~~~~----~~~~~rP~i~-------~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 158 FDLRNLVEDPDEIILRVKKG----GSNPFRPSIE-------LLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred cccccccCChHHHHHHHHhc----CCCCcCcchh-------hhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 987433322 222222220 0111111111 111334468899999999999999999999999988765
Q ss_pred h
Q 005040 708 K 708 (717)
Q Consensus 708 ~ 708 (717)
.
T Consensus 227 ~ 227 (484)
T KOG1023|consen 227 G 227 (484)
T ss_pred c
Confidence 4
No 432
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.83 E-value=2.4e-20 Score=177.08 Aligned_cols=141 Identities=18% Similarity=0.173 Sum_probs=108.4
Q ss_pred cccccccccEEEEEEEecCCCeEEEEEechhhHH--H------------------------HHHHHHHHHHHHhcCCCce
Q 005040 432 CNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLER--A------------------------FRSFDSECEILRNVRHRNL 485 (717)
Q Consensus 432 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~------------------------~~~~~~e~~~l~~l~hpni 485 (717)
...||+|+||.||+|...+|+.||||+++..... . ......|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3689999999999999888999999999754210 0 1122459999999987776
Q ss_pred eeEeeeeecCCeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC
Q 005040 486 LKILGSCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENM 565 (717)
Q Consensus 486 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~ 565 (717)
.....+.. ...++||||++++++....... ..+++.....++.|++.+|.|+|+ +.+|+||||||+||+++ ++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~-~~~~~~~~~~i~~qi~~~L~~l~H---~~giiHrDlkP~NIli~-~~ 154 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLKD-APLSESKARELYLQVIQIMRILYQ---DCRLVHADLSEYNLLYH-DG 154 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhhc-CCCCHHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEE-CC
Confidence 43333222 2238999999988776553332 348899999999999999999942 56899999999999998 47
Q ss_pred cEEEeeeccccccC
Q 005040 566 VAHVSDFGISKLLG 579 (717)
Q Consensus 566 ~~kl~Dfgl~~~~~ 579 (717)
.++|+|||++....
T Consensus 155 ~v~LiDFG~a~~~~ 168 (190)
T cd05147 155 KLYIIDVSQSVEHD 168 (190)
T ss_pred cEEEEEccccccCC
Confidence 89999999997653
No 433
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.82 E-value=1.4e-19 Score=169.02 Aligned_cols=187 Identities=16% Similarity=0.085 Sum_probs=139.8
Q ss_pred CccccccccccEEEEEEEecCCCeEEEEEechhhH---H-HHHHHHHHHHHHHhcC-CCceeeEeeeeecCCeeEEEEEc
Q 005040 430 NECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLE---R-AFRSFDSECEILRNVR-HRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 430 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~-~~~~~~~e~~~l~~l~-hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
.....|++|+||+||.+.. ++.+++.+.+..... . ....+.+|+++|+++. |+++++++++ ...+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 4567899999999998776 678888777654432 1 1235788999999995 5889999886 346999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCC-CCCCeeeCCCCcEEEeeeccccccCCCCC
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDL-KPTNILLDENMVAHVSDFGISKLLGEGED 583 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dl-k~~Nill~~~~~~kl~Dfgl~~~~~~~~~ 583 (717)
+.|.+|.+.... ....++.|+++++.++| ..||+|||| ||+||+++.++.++|+|||++........
T Consensus 80 I~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH----~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~ 147 (218)
T PRK12274 80 LAGAAMYQRPPR--------GDLAYFRAARRLLQQLH----RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRAR 147 (218)
T ss_pred ecCccHHhhhhh--------hhHHHHHHHHHHHHHHH----HCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcch
Confidence 999998754321 11347789999999999 689999999 79999999999999999999986543321
Q ss_pred c----e-------eeeccccCccccCCCccCCC-CcC-cccchhhHHHHHHHHHhCCCCCCcc
Q 005040 584 S----V-------IQTMTMATIGYMAPEYGSEG-IVS-TKCDVYSYGVLLMETFTEKKPTDEM 633 (717)
Q Consensus 584 ~----~-------~~~~~~~t~~y~aPE~~~~~-~~~-~~~Dvws~G~il~el~tg~~p~~~~ 633 (717)
. . .......++.|++|+...-. ..+ ...++++-|..+|.++|++.|....
T Consensus 148 ~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 148 WMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 1 0 01223467888888832211 222 5679999999999999999986553
No 434
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.82 E-value=5.3e-22 Score=207.48 Aligned_cols=283 Identities=25% Similarity=0.304 Sum_probs=172.2
Q ss_pred EEECCCCcce-ecCCcCCCCCCCCCEEEcccccccCccCCcccccccccccCccCCcEEeccCCCCcccCCcchhccccc
Q 005040 16 GLDLGLNSFS-GHIPNTFGNLRHLSVLSLMMNNLTTESSSADQWSFLSSLTNCRNLANLALASNPLGGILPPLIGNFSAS 94 (717)
Q Consensus 16 ~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~ 94 (717)
.|+|+++.++ ......|..+.+|+.|+|++|.++..... .+...+...++|++|+++++.+.. .+..+.
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~----~i~~~l~~~~~l~~l~l~~~~~~~-~~~~~~----- 71 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAK----ALASALRPQPSLKELCLSLNETGR-IPRGLQ----- 71 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHH----HHHHHHhhCCCceEEeccccccCC-cchHHH-----
Confidence 4677777776 34445566677788888888887542211 123345566778888887777652 121111
Q ss_pred cceeeecCCcceecCCccccCCCCCcEEEccCCCCcccCCccccccCC---CCEEeccCCccccc----CCccccCC-CC
Q 005040 95 LQNIYAFECKLGGSIPKEIGNLRGLIVLSLGFNDLNGTIPTSIGTLQQ---LQGFYVPENNLQGY----VPHDLCHL-ER 166 (717)
Q Consensus 95 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~---L~~L~l~~n~i~~~----~~~~~~~l-~~ 166 (717)
.++..+..+++|++|+|++|.+....+..+..+.+ |++|++++|.+.+. ....+..+ ++
T Consensus 72 -------------~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~ 138 (319)
T cd00116 72 -------------SLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPA 138 (319)
T ss_pred -------------HHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCC
Confidence 22344555677777777777776545555554444 77777777776631 22234455 67
Q ss_pred CCEEeccCCcCccc----CCccccCCCCCCeEEecCccccCC----CChhhhcccCCCeEEccCCcCccc----CCcccc
Q 005040 167 LNILNLSGNKLSGA----IPQCLASLTSLRSLYLQSNKLSSS----LPSSLWSLEYILRINLSSNSLKGT----LPSNIQ 234 (717)
Q Consensus 167 L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~----~~~~~~ 234 (717)
|+.|+|++|.+++. .+..+..+++|++|++++|.+++. ++..+..+++|+.|++++|.+++. +...+.
T Consensus 139 L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~ 218 (319)
T cd00116 139 LEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLA 218 (319)
T ss_pred ceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhc
Confidence 77777777777632 233455566777777777777632 223344556777777777777632 233455
Q ss_pred CCCCCCeEEccCCCCCCCCcccccC-----CcccccccccCccccCC----CCccccccCccceEeccCCCCCCC----C
Q 005040 235 KLNVLIDLDLSRNQLSSDIPSTIGT-----LKNLETLSLAGNQFQGP----IPESVGNLISLESLDFSNNNLSGK----I 301 (717)
Q Consensus 235 ~l~~L~~L~l~~N~l~~~~~~~~~~-----l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~L~~N~~~~~----~ 301 (717)
.+++|++|++++|.+++.....+.. .+.|+.|++++|.+++. ....+..+++|+.+++++|++... .
T Consensus 219 ~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~ 298 (319)
T cd00116 219 SLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLL 298 (319)
T ss_pred ccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHH
Confidence 6677888888887777532222221 36788888888877522 223445557788888888887744 3
Q ss_pred ccccccc-ccccEEEccCCcc
Q 005040 302 PKSLEAL-SHLKQFNVSHNRL 321 (717)
Q Consensus 302 ~~~~~~l-~~L~~L~l~~N~l 321 (717)
.+.+... +.|+.|++.+|++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 299 AESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred HHHHhhcCCchhhcccCCCCC
Confidence 3444444 6777777777764
No 435
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.81 E-value=6.8e-21 Score=208.31 Aligned_cols=247 Identities=23% Similarity=0.285 Sum_probs=177.9
Q ss_pred cCCccccccccccEEEEEEEecCCCeEEEEEechhh-HHHHHHH---HHHHHHHHhcCCCceeeEeeeeecCCeeEEEEE
Q 005040 428 EFNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQL-ERAFRSF---DSECEILRNVRHRNLLKILGSCSNLDFKALVLE 503 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~---~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 503 (717)
++...+.+|.+.|=.|.+|+++.|. |+||++-+.. .-..+.| ..|++ ...++|||.+++.-+.......|||-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 5667789999999999999998887 8899986554 2222333 33444 555699999999988888888899999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccc--cCCC
Q 005040 504 FMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKL--LGEG 581 (717)
Q Consensus 504 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~--~~~~ 581 (717)
|+.+ +|+|.+..++ ++...+..-|+.|++.|+.-+| ..+|+|||||.+|||+++-..+.|+||..-+. +.++
T Consensus 102 yvkh-nLyDRlSTRP-FL~~iEKkWiaFQLL~al~qcH----~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTRP-FLVLIEKKWIAFQLLKALSQCH----KLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred HHhh-hhhhhhccch-HHHHHHHHHHHHHHHHHHHHHH----HcCccccccccceEEEeeechhhhhcccccCCccCCCC
Confidence 9865 9999988654 3667777889999999999999 68999999999999999999999999987542 2222
Q ss_pred CC---ceeeeccccCccccCCCccCC----------CC-cCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHh
Q 005040 582 ED---SVIQTMTMATIGYMAPEYGSE----------GI-VSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKE 646 (717)
Q Consensus 582 ~~---~~~~~~~~~t~~y~aPE~~~~----------~~-~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~ 646 (717)
+. .........-..|.|||.+-. .. .+++-||||+||++.|+++ |++||.- .++-.+...
T Consensus 176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L-----SQL~aYr~~ 250 (1431)
T KOG1240|consen 176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL-----SQLLAYRSG 250 (1431)
T ss_pred CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH-----HHHHhHhcc
Confidence 21 111111122345999994322 12 5778999999999999998 6777753 112111111
Q ss_pred h--CCCc-hhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 005040 647 S--LPHR-LTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRK 704 (717)
Q Consensus 647 ~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~ 704 (717)
. .++. ++.+-| ..+..++..|++-||++|.++++.++.-++
T Consensus 251 ~~~~~e~~Le~Ied-----------------~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG 294 (1431)
T KOG1240|consen 251 NADDPEQLLEKIED-----------------VSLRNLILSMIQRDPSKRLSAEDYLQKYRG 294 (1431)
T ss_pred CccCHHHHHHhCcC-----------------ccHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence 0 0000 111111 237799999999999999999999887544
No 436
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.81 E-value=9.4e-20 Score=178.63 Aligned_cols=196 Identities=25% Similarity=0.293 Sum_probs=138.7
Q ss_pred CCCceeeEeeeeec---------------------------CCeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHH
Q 005040 481 RHRNLLKILGSCSN---------------------------LDFKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDV 533 (717)
Q Consensus 481 ~hpniv~~~~~~~~---------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i 533 (717)
+|||||++.++|.+ ...+|+||..++ .+|.+|+..+. .+...+.-++.|+
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~--~s~r~~~~~laQl 350 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRH--RSYRTGRVILAQL 350 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCC--CchHHHHHHHHHH
Confidence 59999999987633 235789999885 49999998655 4566777789999
Q ss_pred HHHHHHHhhcCCCCCeEecCCCCCCeeeC--CCC--cEEEeeeccccccCCCC----CceeeeccccCccccCCCccCCC
Q 005040 534 GSALEYLHHCHSSAPIIHCDLKPTNILLD--ENM--VAHVSDFGISKLLGEGE----DSVIQTMTMATIGYMAPEYGSEG 605 (717)
Q Consensus 534 ~~~l~~LH~~~~~~~ivH~dlk~~Nill~--~~~--~~kl~Dfgl~~~~~~~~----~~~~~~~~~~t~~y~aPE~~~~~ 605 (717)
++|+.||| .++|.|||+|++|||+. +|+ ...++|||.+---.... .........|....||||+....
T Consensus 351 LEav~hL~----~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~ 426 (598)
T KOG4158|consen 351 LEAVTHLH----KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAV 426 (598)
T ss_pred HHHHHHHH----HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcC
Confidence 99999999 78999999999999994 333 57899999764221110 11112223467779999975432
Q ss_pred C------cCcccchhhHHHHHHHHHhCCCCCCccccCcchH--HHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHH
Q 005040 606 I------VSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSL--RRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSI 677 (717)
Q Consensus 606 ~------~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 677 (717)
. .-.|+|.|+.|.+.||+++...||-. .+++.+ +.+.....| .-+..++..+
T Consensus 427 PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~--rGem~L~~r~Yqe~qLP------------------alp~~vpp~~ 486 (598)
T KOG4158|consen 427 PGPNAVVNYEKADTWAAGALAYEIFGRSNPFYK--RGEMLLDTRTYQESQLP------------------ALPSRVPPVA 486 (598)
T ss_pred CCCceeeccchhhhhhhhhhHHHHhccCCcccc--cchheechhhhhhhhCC------------------CCcccCChHH
Confidence 2 12489999999999999999999965 232221 221111111 1123556778
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHH
Q 005040 678 MDLALDCCMDTPHKRIHMTDAAAKLR 703 (717)
Q Consensus 678 ~~li~~cl~~~P~~Rpt~~ev~~~L~ 703 (717)
.+++...++.||.+|++..=+...|.
T Consensus 487 rqlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 487 RQLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred HHHHHHHhcCCccccCCccHHHhHHH
Confidence 89999999999999999765555443
No 437
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.80 E-value=4.7e-19 Score=169.24 Aligned_cols=140 Identities=21% Similarity=0.216 Sum_probs=110.2
Q ss_pred cccccccccEEEEEEEecCCCeEEEEEechhhHH--------------------------HHHHHHHHHHHHHhcCCCce
Q 005040 432 CNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLER--------------------------AFRSFDSECEILRNVRHRNL 485 (717)
Q Consensus 432 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--------------------------~~~~~~~e~~~l~~l~hpni 485 (717)
...||+|+||.||+|...+|+.||||++...... ....+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999878999999998754210 01224578999999999987
Q ss_pred eeEeeeeecCCeeEEEEEccCCCCHHHH-HhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCC
Q 005040 486 LKILGSCSNLDFKALVLEFMPNGSLEKW-LYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDEN 564 (717)
Q Consensus 486 v~~~~~~~~~~~~~lv~e~~~~g~L~~~-l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~ 564 (717)
.....+.... .++||||++++++... +.. ..++......++.|++.++.++|+ ..+|+||||||+||+++ +
T Consensus 82 ~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH~---~~givHrDlkP~NIll~-~ 153 (190)
T cd05145 82 PVPEPILLKK--NVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLYQ---EAGLVHGDLSEYNILYH-D 153 (190)
T ss_pred CCceEEEecC--CEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCChhhEEEE-C
Confidence 5444433322 4899999998755433 333 336788899999999999999993 27999999999999999 8
Q ss_pred CcEEEeeeccccccC
Q 005040 565 MVAHVSDFGISKLLG 579 (717)
Q Consensus 565 ~~~kl~Dfgl~~~~~ 579 (717)
+.++|+|||++....
T Consensus 154 ~~~~liDFG~a~~~~ 168 (190)
T cd05145 154 GKPYIIDVSQAVELD 168 (190)
T ss_pred CCEEEEEcccceecC
Confidence 899999999998764
No 438
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.80 E-value=2.3e-19 Score=176.85 Aligned_cols=231 Identities=21% Similarity=0.272 Sum_probs=146.9
Q ss_pred cCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcC----------CCceeeEeeee-
Q 005040 428 EFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVR----------HRNLLKILGSC- 492 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~----------hpniv~~~~~~- 492 (717)
.+.....||.|+++.||.+.+. +++++|||++.... ....+.+++|.-....+. |-.++..++..
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 3455678999999999999986 68999999885332 334566666654444432 11222222211
Q ss_pred -----------ecCC-----eeEEEEEccCCCCHHHHHhh---CC---CCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 005040 493 -----------SNLD-----FKALVLEFMPNGSLEKWLYS---HN---YFLDILQRLNIMIDVGSALEYLHHCHSSAPII 550 (717)
Q Consensus 493 -----------~~~~-----~~~lv~e~~~~g~L~~~l~~---~~---~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~iv 550 (717)
.+.. ..+++|+-+. +||.+++.. .. .......+..+..|+++.+++|| ..|+|
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh----~~GlV 167 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLH----SYGLV 167 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH----HTTEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHh----hcceE
Confidence 1111 2367888774 699888652 11 12344556778899999999999 68999
Q ss_pred ecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceeeeccccCccccCCCccCC--------CCcCcccchhhHHHHHHH
Q 005040 551 HCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSE--------GIVSTKCDVYSYGVLLME 622 (717)
Q Consensus 551 H~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--------~~~~~~~Dvws~G~il~e 622 (717)
|+||+|+|++++.+|.+.|+||+.....+.. ......+..|.|||.... ..++.+.|.|++|+++|.
T Consensus 168 Hgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~-----~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~ 242 (288)
T PF14531_consen 168 HGDIKPENFLLDQDGGVFLGDFSSLVRAGTR-----YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYS 242 (288)
T ss_dssp EST-SGGGEEE-TTS-EEE--GGGEEETTEE-----EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHH
T ss_pred ecccceeeEEEcCCCCEEEcChHHHeecCce-----eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHH
Confidence 9999999999999999999999987765321 111345678999996433 357899999999999999
Q ss_pred HHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCC
Q 005040 623 TFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKR 692 (717)
Q Consensus 623 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R 692 (717)
|++|+.||+....... +.. .+....+.++.+..+|..+|+.+|++|
T Consensus 243 lWC~~lPf~~~~~~~~------------------~~~------~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 243 LWCGRLPFGLSSPEAD------------------PEW------DFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHSS-STCCCGGGST------------------SGG------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred HHHccCCCCCCCcccc------------------ccc------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence 9999999986422110 000 111222566778999999999999988
No 439
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.78 E-value=7.1e-21 Score=165.36 Aligned_cols=157 Identities=30% Similarity=0.540 Sum_probs=88.8
Q ss_pred ccCCCCCcEEEccCCCCcccCCccccccCCCCEEeccCCcccccCCccccCCCCCCEEeccCCcCcccCCccccCCCCCC
Q 005040 113 IGNLRGLIVLSLGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPHDLCHLERLNILNLSGNKLSGAIPQCLASLTSLR 192 (717)
Q Consensus 113 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 192 (717)
+.++.+.+.|.||+|+++ .+|..+..+.+|+.|++++|+|+ ..|..++.+++|+.|+++-|++. ..|..|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 444555566666666666 44445666666666666666665 34555566666666666666655 4555566666666
Q ss_pred eEEecCccccC-CCChhhhcccCCCeEEccCCcCcccCCccccCCCCCCeEEccCCCCCCCCcccccCCcccccccccCc
Q 005040 193 SLYLQSNKLSS-SLPSSLWSLEYILRINLSSNSLKGTLPSNIQKLNVLIDLDLSRNQLSSDIPSTIGTLKNLETLSLAGN 271 (717)
Q Consensus 193 ~L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 271 (717)
.|||.+|++.. .+|..|..|..|+.|+|++|.+. .+|..++.+++|+.|.+.+|.+- ..|..++.+..|++|++.+|
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGN 183 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccc
Confidence 66666655552 34555555555555555555555 45555555555555555555554 25555555555555555555
Q ss_pred ccc
Q 005040 272 QFQ 274 (717)
Q Consensus 272 ~l~ 274 (717)
+++
T Consensus 184 rl~ 186 (264)
T KOG0617|consen 184 RLT 186 (264)
T ss_pred eee
Confidence 555
No 440
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.77 E-value=2.4e-20 Score=195.04 Aligned_cols=257 Identities=26% Similarity=0.302 Sum_probs=186.6
Q ss_pred EEEcccccccCccCCcccccccccccCccCCcEEeccCCCCcccCCcchhccccccceeeecCCcceecCCccccCCCCC
Q 005040 40 VLSLMMNNLTTESSSADQWSFLSSLTNCRNLANLALASNPLGGILPPLIGNFSASLQNIYAFECKLGGSIPKEIGNLRGL 119 (717)
Q Consensus 40 ~L~L~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L 119 (717)
.|+|+++.+++.. +...+..+.+|++|++++|.++..... .++..+...++|
T Consensus 2 ~l~L~~~~l~~~~-------~~~~~~~l~~L~~l~l~~~~l~~~~~~---------------------~i~~~l~~~~~l 53 (319)
T cd00116 2 QLSLKGELLKTER-------ATELLPKLLCLQVLRLEGNTLGEEAAK---------------------ALASALRPQPSL 53 (319)
T ss_pred ccccccCcccccc-------hHHHHHHHhhccEEeecCCCCcHHHHH---------------------HHHHHHhhCCCc
Confidence 4566666665322 122345555566666666666532111 233446667778
Q ss_pred cEEEccCCCCcc------cCCccccccCCCCEEeccCCcccccCCccccCCCC---CCEEeccCCcCcc----cCCcccc
Q 005040 120 IVLSLGFNDLNG------TIPTSIGTLQQLQGFYVPENNLQGYVPHDLCHLER---LNILNLSGNKLSG----AIPQCLA 186 (717)
Q Consensus 120 ~~L~L~~n~l~~------~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~---L~~L~L~~n~l~~----~~~~~~~ 186 (717)
++|+++++.+.. .++..+..+++|+.|++++|.+....+..+..+.+ |+.|++++|.+++ .+...+.
T Consensus 54 ~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~ 133 (319)
T cd00116 54 KELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLK 133 (319)
T ss_pred eEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHH
Confidence 888888887762 23456778999999999999998766666666655 9999999999983 2233456
Q ss_pred CC-CCCCeEEecCccccCC----CChhhhcccCCCeEEccCCcCccc----CCccccCCCCCCeEEccCCCCCCCC----
Q 005040 187 SL-TSLRSLYLQSNKLSSS----LPSSLWSLEYILRINLSSNSLKGT----LPSNIQKLNVLIDLDLSRNQLSSDI---- 253 (717)
Q Consensus 187 ~l-~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~---- 253 (717)
.+ ++|+.|+|++|.+++. ++..+..+++|++|++++|.+++. ++..+..+++|+.|++++|.+++..
T Consensus 134 ~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l 213 (319)
T cd00116 134 DLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASAL 213 (319)
T ss_pred hCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHH
Confidence 67 8999999999999842 344567778999999999999842 3345566789999999999998543
Q ss_pred cccccCCcccccccccCccccCCCCccccc-----cCccceEeccCCCCCC----CCcccccccccccEEEccCCccccc
Q 005040 254 PSTIGTLKNLETLSLAGNQFQGPIPESVGN-----LISLESLDFSNNNLSG----KIPKSLEALSHLKQFNVSHNRLEGE 324 (717)
Q Consensus 254 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-----l~~L~~L~L~~N~~~~----~~~~~~~~l~~L~~L~l~~N~l~~~ 324 (717)
+..+..+++|++|++++|++++.....+.. .+.|+.|++++|.++. .+...+..+++|+.+++++|+++..
T Consensus 214 ~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~ 293 (319)
T cd00116 214 AETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEE 293 (319)
T ss_pred HHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHH
Confidence 334567889999999999998644444432 3799999999999973 2345566778999999999999865
No 441
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.77 E-value=6.2e-20 Score=191.73 Aligned_cols=225 Identities=25% Similarity=0.279 Sum_probs=176.1
Q ss_pred cccccccEEEEEEEe----cCCCeEEEEEechhhH--HHHHHHHHHHHHHHhcC-CCceeeEeeeeecCCeeEEEEEccC
Q 005040 434 LLGTGGFGSVYKGTL----SDGTNVAIKIFNLQLE--RAFRSFDSECEILRNVR-HRNLLKILGSCSNLDFKALVLEFMP 506 (717)
Q Consensus 434 ~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~-hpniv~~~~~~~~~~~~~lv~e~~~ 506 (717)
.+|+|.||.|+.+.. +.|..+|.|+.++... ........|..++...+ ||.++++...++.+...+++++|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 378999999997652 3577789888765431 11125566889999997 9999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCcee
Q 005040 507 NGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVI 586 (717)
Q Consensus 507 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~ 586 (717)
+|+|...+..... +...........++-+++++| +.+|+|||+|++||+++.+|++++.|||+++..-...
T Consensus 81 gg~lft~l~~~~~-f~~~~~~~~~aelaLald~lh----~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~---- 151 (612)
T KOG0603|consen 81 GGDLFTRLSKEVM-FDELDVAFYLAELALALDHLH----KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK---- 151 (612)
T ss_pred cchhhhccccCCc-hHHHHHHHHHHHHHHHHhhcc----hhHHHHhcccccceeecccCccccCCchhhhHhHhhh----
Confidence 9999888876654 455556667778888999999 6899999999999999999999999999998653322
Q ss_pred eeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhh
Q 005040 587 QTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQA 666 (717)
Q Consensus 587 ~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (717)
..+||.-|||||+.. .....+|.||||++++||+||..||.. .......+ . .
T Consensus 152 --~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~-----~~~~~Il~------------~-------~ 203 (612)
T KOG0603|consen 152 --IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG-----DTMKRILK------------A-------E 203 (612)
T ss_pred --hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch-----HHHHHHhh------------h-------c
Confidence 128999999999987 566789999999999999999999865 11111111 0 1
Q ss_pred hhhhHHHHHHHHHHHhhccCCCCCCCCCH
Q 005040 667 FSDKMDCLFSIMDLALDCCMDTPHKRIHM 695 (717)
Q Consensus 667 ~~~~~~~~~~l~~li~~cl~~~P~~Rpt~ 695 (717)
...+.+.+..+.+++..++..+|..|...
T Consensus 204 ~~~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 204 LEMPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred cCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 12233556678889999999999999866
No 442
>PRK10345 hypothetical protein; Provisional
Probab=99.77 E-value=3.6e-18 Score=163.37 Aligned_cols=137 Identities=20% Similarity=0.272 Sum_probs=106.2
Q ss_pred CCccccccccccEEEEEEEecCCCeEEEEEechhhHHHHHHHHHHHHHHHhc-----CCCceeeEeeeeecCC---eeE-
Q 005040 429 FNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLERAFRSFDSECEILRNV-----RHRNLLKILGSCSNLD---FKA- 499 (717)
Q Consensus 429 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-----~hpniv~~~~~~~~~~---~~~- 499 (717)
+.....||+|+||.||. ...++.. +||++........+.+.+|+++++.+ .||||++++|++++.. ..+
T Consensus 4 L~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred cCCcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 34567899999999996 3234444 79988765444456789999999999 5799999999998763 434
Q ss_pred EEEEc--cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHH-HHHhhcCCCCCeEecCCCCCCeeeCC----CCcEEEeee
Q 005040 500 LVLEF--MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSAL-EYLHHCHSSAPIIHCDLKPTNILLDE----NMVAHVSDF 572 (717)
Q Consensus 500 lv~e~--~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l-~~LH~~~~~~~ivH~dlk~~Nill~~----~~~~kl~Df 572 (717)
+|+|| +.+|+|.+++.+.. +++. ..++.+++.++ +||| +.+|+||||||+||+++. ++.++|+||
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~~--~~e~--~~~~~~~L~~l~~yLh----~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQCR--YEED--VAQLRQLLKKLKRYLL----DNRIVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred EEecCCCCcchhHHHHHHccc--ccHh--HHHHHHHHHHHHHHHH----HCCEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 78999 55799999997643 5555 35677888777 9999 688999999999999974 348999995
Q ss_pred ccc
Q 005040 573 GIS 575 (717)
Q Consensus 573 gl~ 575 (717)
+.+
T Consensus 154 ~G~ 156 (210)
T PRK10345 154 IGE 156 (210)
T ss_pred CCC
Confidence 433
No 443
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.76 E-value=3.2e-20 Score=161.31 Aligned_cols=161 Identities=32% Similarity=0.519 Sum_probs=96.1
Q ss_pred CCCCCEEeccCCcCcccCCccccCCCCCCeEEecCccccCCCChhhhcccCCCeEEccCCcCcccCCccccCCCCCCeEE
Q 005040 164 LERLNILNLSGNKLSGAIPQCLASLTSLRSLYLQSNKLSSSLPSSLWSLEYILRINLSSNSLKGTLPSNIQKLNVLIDLD 243 (717)
Q Consensus 164 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 243 (717)
+.+++.|.||+|+++ .+|..++.+.+|+.|++++|+|+ .+|..++++++|+.|+++-|++. +.|..|+.++.|+.||
T Consensus 32 ~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 344445555555555 33334455555555555555555 34445555555555555555555 5555555555555555
Q ss_pred ccCCCCCC-CCcccccCCcccccccccCccccCCCCccccccCccceEeccCCCCCCCCcccccccccccEEEccCCccc
Q 005040 244 LSRNQLSS-DIPSTIGTLKNLETLSLAGNQFQGPIPESVGNLISLESLDFSNNNLSGKIPKSLEALSHLKQFNVSHNRLE 322 (717)
Q Consensus 244 l~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~~~~~~~~~~l~~L~~L~l~~N~l~ 322 (717)
|++|++.. ..|..|..+..|+.|+|++|.+. .+|..++++++|+.|.+..|.+. ..|+.++.+..|++|++.+|+++
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~ 186 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT 186 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceee
Confidence 55555543 34555666666777777777776 56666777777777777777766 56777777777777777777777
Q ss_pred ccccccc
Q 005040 323 GEIPVKG 329 (717)
Q Consensus 323 ~~~p~~~ 329 (717)
-.+|..+
T Consensus 187 vlppel~ 193 (264)
T KOG0617|consen 187 VLPPELA 193 (264)
T ss_pred ecChhhh
Confidence 6655543
No 444
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.73 E-value=1.3e-17 Score=187.10 Aligned_cols=201 Identities=22% Similarity=0.246 Sum_probs=159.9
Q ss_pred HHHHHhccCCccccccccccEEEEEEEecCCCeEEEEEechhhHHHHHHHHHHHHHHHhcC---CCceeeEeeeeecCCe
Q 005040 421 DIRRATDEFNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLERAFRSFDSECEILRNVR---HRNLLKILGSCSNLDF 497 (717)
Q Consensus 421 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---hpniv~~~~~~~~~~~ 497 (717)
+++...+.|.+.+.||+|+||.||+|...+|+.||+|+=+...... |.=-.+++.+|+ -+.|+.+..++.-.+.
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE---fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~ 768 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE---FYICLQVMERLKPQMLPSIMHISSAHVFQNA 768 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee---eeehHHHHHhhchhhhcchHHHHHHHccCCc
Confidence 3444557888889999999999999998889999999865443210 111123333443 2455555555555667
Q ss_pred eEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeC-------CCCcEEEe
Q 005040 498 KALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLD-------ENMVAHVS 570 (717)
Q Consensus 498 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~-------~~~~~kl~ 570 (717)
.++|+||.+.|+|.+++.. ...++|.-+..++.|+++.+.+|| ..+||||||||+|.++. ...-++|+
T Consensus 769 S~lv~ey~~~Gtlld~~N~-~~~m~e~lv~~~~~qml~ive~lH----~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lI 843 (974)
T KOG1166|consen 769 SVLVSEYSPYGTLLDLINT-NKVMDEYLVMFFSCQMLRIVEHLH----AMGIIHGDIKPDNFLLRREICADSDSKGLYLI 843 (974)
T ss_pred ceeeeeccccccHHHhhcc-CCCCCchhhhHHHHHHHHHHHHHH----hcceecccCCcceeEeecccCCCCcccceEEE
Confidence 7899999999999999984 445999999999999999999999 67899999999999994 23468999
Q ss_pred eeccccccCCCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCC
Q 005040 571 DFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKP 629 (717)
Q Consensus 571 Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p 629 (717)
|||.+.++........-....+|-.+-.+|+..+..++.++|.|.++.+++-|+.|+..
T Consensus 844 DfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 844 DFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred ecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 99999988655444445566789999999999999999999999999999999999753
No 445
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.73 E-value=2.8e-18 Score=188.11 Aligned_cols=216 Identities=24% Similarity=0.253 Sum_probs=149.0
Q ss_pred hccCCccccccccccEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
..+|+.++.|..|+||.||.++++ ..+.+|.|+=+ +. -+.+- ++.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNk-q~-----lilRn--ilt~a~npfvv------------------ 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINK-QN-----LILRN--ILTFAGNPFVV------------------ 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcccc-cc-----hhhhc--cccccCCccee------------------
Confidence 368999999999999999999887 56778885422 10 01110 22222333333
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCc
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDS 584 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 584 (717)
||-...++.-+. ++.. ++.+++|+| +.+|+|||+||+|++++.-|++|++|||+++........
T Consensus 136 ---gDc~tllk~~g~-lPvd--------mvla~Eylh----~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at 199 (1205)
T KOG0606|consen 136 ---GDCATLLKNIGP-LPVD--------MVLAVEYLH----SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT 199 (1205)
T ss_pred ---chhhhhcccCCC-Ccch--------hhHHhHhhc----cCCeecCCCCCCcceeeecccccccchhhhhhhhhhccc
Confidence 455555554332 3322 278899999 789999999999999999999999999998754222111
Q ss_pred e-------------eeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCc
Q 005040 585 V-------------IQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHR 651 (717)
Q Consensus 585 ~-------------~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 651 (717)
. .....+||+.|.|||++....|+..+|+|++|+++||.+-|+.||.+..+ +..+.+.+...+.
T Consensus 200 nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtp-eelfg~visd~i~-- 276 (1205)
T KOG0606|consen 200 NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP-EELFGQVISDDIE-- 276 (1205)
T ss_pred hhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCH-HHHHhhhhhhhcc--
Confidence 1 11234799999999999999999999999999999999999999987422 2223332222111
Q ss_pred hhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 652 LTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
+. ..++....++.+++.+.++.+|.+|.-....++
T Consensus 277 wp--------------E~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~e 311 (1205)
T KOG0606|consen 277 WP--------------EEDEALPPEAQDLIEQLLRQNPLCRLGTGGALE 311 (1205)
T ss_pred cc--------------ccCcCCCHHHHHHHHHHHHhChHhhcccchhhh
Confidence 00 112234466889999999999999986554443
No 446
>smart00090 RIO RIO-like kinase.
Probab=99.71 E-value=4.3e-17 Score=160.22 Aligned_cols=143 Identities=19% Similarity=0.142 Sum_probs=111.0
Q ss_pred ccCCccccccccccEEEEEEE--ecCCCeEEEEEechhhH------------------------HHHHHHHHHHHHHHhc
Q 005040 427 DEFNECNLLGTGGFGSVYKGT--LSDGTNVAIKIFNLQLE------------------------RAFRSFDSECEILRNV 480 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~--~~~~~~vavK~~~~~~~------------------------~~~~~~~~e~~~l~~l 480 (717)
..|++.+.||+|+||.||+|. ..+|+.||+|++..... .....+..|++.+.++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 357788999999999999998 45899999999864321 0112356799999999
Q ss_pred CCC--ceeeEeeeeecCCeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCC-eEecCCCCC
Q 005040 481 RHR--NLLKILGSCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAP-IIHCDLKPT 557 (717)
Q Consensus 481 ~hp--niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~-ivH~dlk~~ 557 (717)
.+. .+.+.+++ ...++||||++++++..+.... ..........++.|++.++.+|| ..+ ++|||+||+
T Consensus 108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH----~~g~iiH~Dikp~ 178 (237)
T smart00090 108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD-VEPEEEEEFELYDDILEEMRKLY----KEGELVHGDLSEY 178 (237)
T ss_pred HhcCCCCCeeeEe----cCceEEEEEecCCccccccccc-CCcchHHHHHHHHHHHHHHHHHH----hcCCEEeCCCChh
Confidence 753 34444443 2348999999998887654332 23556667889999999999999 678 999999999
Q ss_pred CeeeCCCCcEEEeeeccccccC
Q 005040 558 NILLDENMVAHVSDFGISKLLG 579 (717)
Q Consensus 558 Nill~~~~~~kl~Dfgl~~~~~ 579 (717)
||+++ ++.++++|||.+...+
T Consensus 179 NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 179 NILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred hEEEE-CCCEEEEEChhhhccC
Confidence 99999 8899999999987543
No 447
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.70 E-value=1.9e-16 Score=154.70 Aligned_cols=134 Identities=22% Similarity=0.330 Sum_probs=112.7
Q ss_pred ccccccccEEEEEEEecCCCeEEEEEechhh--------HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 433 NLLGTGGFGSVYKGTLSDGTNVAIKIFNLQL--------ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
+.||+|++|.||+|.. +|..|++|+..... ......+.+|++++..++|+++.....++.+....++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999988 67789999765321 11224577899999999999988777777677788999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccc
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKL 577 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 577 (717)
++|++|.+++.... + .+..++.+++.++.++| +.+++|||++|.||+++ ++.++++|||.+..
T Consensus 81 ~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH----~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG----M-EELELSREIGRLVGKLH----SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHH----hCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999987532 2 78889999999999999 68899999999999999 78999999998764
No 448
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.70 E-value=2.8e-16 Score=174.61 Aligned_cols=144 Identities=20% Similarity=0.268 Sum_probs=114.0
Q ss_pred HHHHHHHhccCCccccccccccEEEEEEEecCCCeEEEEEe-chhh-------HHHHHHHHHHHHHHHhcCCCceeeEee
Q 005040 419 YLDIRRATDEFNECNLLGTGGFGSVYKGTLSDGTNVAIKIF-NLQL-------ERAFRSFDSECEILRNVRHRNLLKILG 490 (717)
Q Consensus 419 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~-~~~~-------~~~~~~~~~e~~~l~~l~hpniv~~~~ 490 (717)
+...+.....|...+.||+|+||+||+|.+.+.. +++|+. .+.. ....+.+.+|+++++.++|++++....
T Consensus 325 ~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~ 403 (535)
T PRK09605 325 WIKEEEVKRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVI 403 (535)
T ss_pred eccccccccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEE
Confidence 3333444455667889999999999999875443 444432 1110 112356788999999999999988887
Q ss_pred eeecCCeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEe
Q 005040 491 SCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVS 570 (717)
Q Consensus 491 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~ 570 (717)
++.+....++||||+++++|.+++. ....++.++++++.||| +.+++|||+||+||++ .++.++|+
T Consensus 404 ~~~~~~~~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH----~~giiHrDlkp~NILl-~~~~~~li 469 (535)
T PRK09605 404 YDVDPEEKTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLH----KAGIVHGDLTTSNFIV-RDDRLYLI 469 (535)
T ss_pred EEEeCCCCEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHH----hCCCccCCCChHHEEE-ECCcEEEE
Confidence 7777777899999999999999876 34678999999999999 6899999999999999 67899999
Q ss_pred eeccccc
Q 005040 571 DFGISKL 577 (717)
Q Consensus 571 Dfgl~~~ 577 (717)
|||+++.
T Consensus 470 DFGla~~ 476 (535)
T PRK09605 470 DFGLGKY 476 (535)
T ss_pred eCccccc
Confidence 9999875
No 449
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.68 E-value=3.4e-16 Score=150.89 Aligned_cols=136 Identities=21% Similarity=0.186 Sum_probs=107.8
Q ss_pred cCCccccccccccEEEEEEEecCCCeEEEEEechhhH----------------------HHHHHHHHHHHHHHhcCCC--
Q 005040 428 EFNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLE----------------------RAFRSFDSECEILRNVRHR-- 483 (717)
Q Consensus 428 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~----------------------~~~~~~~~e~~~l~~l~hp-- 483 (717)
-|...+.||+|+||.||+|..++|+.||||++..... .....+..|..++..+.|+
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 4777889999999999999988899999998754210 0112356789999999877
Q ss_pred ceeeEeeeeecCCeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCC
Q 005040 484 NLLKILGSCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDE 563 (717)
Q Consensus 484 niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~ 563 (717)
.+...++. ...++||||+++++|...... .....++.+++.++.++| ..+++||||+|+||++++
T Consensus 96 ~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~-------~~~~~~~~~i~~~l~~lh----~~gi~H~Dl~p~Nill~~ 160 (198)
T cd05144 96 PVPKPIDW----NRHAVVMEYIDGVELYRVRVL-------EDPEEVLDEILEEIVKAY----KHGIIHGDLSEFNILVDD 160 (198)
T ss_pred CCCceeec----CCceEEEEEeCCcchhhcccc-------ccHHHHHHHHHHHHHHHH----HCCCCcCCCCcccEEEcC
Confidence 44444442 345899999999998765431 234568899999999999 678999999999999999
Q ss_pred CCcEEEeeecccccc
Q 005040 564 NMVAHVSDFGISKLL 578 (717)
Q Consensus 564 ~~~~kl~Dfgl~~~~ 578 (717)
++.++|+|||.+...
T Consensus 161 ~~~~~liDfg~~~~~ 175 (198)
T cd05144 161 DEKIYIIDWPQMVST 175 (198)
T ss_pred CCcEEEEECCccccC
Confidence 999999999998654
No 450
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.67 E-value=4.2e-16 Score=150.71 Aligned_cols=130 Identities=23% Similarity=0.330 Sum_probs=105.6
Q ss_pred cccccccEEEEEEEecCCCeEEEEEechhh--------HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEcc
Q 005040 434 LLGTGGFGSVYKGTLSDGTNVAIKIFNLQL--------ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFM 505 (717)
Q Consensus 434 ~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 505 (717)
.||+|+||.||+|.+ ++..|++|+..... ......+.+|+++++.++|+++.....++.+....++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999996 57889999864321 112356778999999999887655555555566679999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccc
Q 005040 506 PNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKL 577 (717)
Q Consensus 506 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 577 (717)
+|++|.+++..... .++.+++++|.++| +.+++|||++|.||+++ ++.++++|||++..
T Consensus 80 ~g~~l~~~~~~~~~--------~~~~~i~~~l~~lH----~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGND--------ELLREIGRLVGKLH----KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcHH--------HHHHHHHHHHHHHH----HCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999998765321 78899999999999 68999999999999999 88999999998765
No 451
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.65 E-value=3e-17 Score=168.46 Aligned_cols=172 Identities=24% Similarity=0.365 Sum_probs=127.7
Q ss_pred CeeEEEEEccCCCCHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeec
Q 005040 496 DFKALVLEFMPNGSLEKWLYS--HNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFG 573 (717)
Q Consensus 496 ~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 573 (717)
.+.|+.|++|...+|.+|+.. .....++.....++.|++.|+.| ++.+|+|+||.||+...+..+||+|||
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y-------k~~ihrdlkp~nif~~~d~q~kIgDFg 401 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY-------KGLIHRDLKPSNIFFSDDDQLKIGDFG 401 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh-------ccchhhhccccccccccchhhhhhhhh
Confidence 357899999999999999963 34457888899999999999998 368999999999999999999999999
Q ss_pred cccccCCCC----CceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh-CCCCCCccccCcchHHHHHHhhC
Q 005040 574 ISKLLGEGE----DSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT-EKKPTDEMFTGEMSLRRWVKESL 648 (717)
Q Consensus 574 l~~~~~~~~----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 648 (717)
+........ .....+...||..||+||.+.+..|+.|+||||+|++++|++. =..+++.. .
T Consensus 402 l~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~----~---------- 467 (516)
T KOG1033|consen 402 LVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI----A---------- 467 (516)
T ss_pred heeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH----H----------
Confidence 988765444 1223455679999999999999999999999999999999997 33332210 0
Q ss_pred CCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHH
Q 005040 649 PHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMT 696 (717)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ 696 (717)
...++-|..+.... ..++ ++-..++..++.+.|.+||++.
T Consensus 468 --t~~d~r~g~ip~~~-----~~d~-p~e~~ll~~lls~~p~~RP~~~ 507 (516)
T KOG1033|consen 468 --TLTDIRDGIIPPEF-----LQDY-PEEYTLLQQLLSPSPEERPSAI 507 (516)
T ss_pred --hhhhhhcCCCChHH-----hhcC-cHHHHHHHHhcCCCcccCchHH
Confidence 01111111111100 0011 1234799999999999999443
No 452
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.58 E-value=1.1e-14 Score=139.26 Aligned_cols=137 Identities=22% Similarity=0.251 Sum_probs=97.6
Q ss_pred cccccccccEEEEEEEecCCCeEEEEEechhhHH--HHHH----------------------HHHHHHHHHhcCCCc--e
Q 005040 432 CNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLER--AFRS----------------------FDSECEILRNVRHRN--L 485 (717)
Q Consensus 432 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~----------------------~~~e~~~l~~l~hpn--i 485 (717)
.+.||+|+||.||+|...+++.||||++...... .... ...|.+.+..+.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999999888999999988653211 1111 134666666664432 4
Q ss_pred eeEeeeeecCCeeEEEEEccCCCCHHH-HHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCC
Q 005040 486 LKILGSCSNLDFKALVLEFMPNGSLEK-WLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDEN 564 (717)
Q Consensus 486 v~~~~~~~~~~~~~lv~e~~~~g~L~~-~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~ 564 (717)
.+.+++ ...++||||++++++.. .+.... .. .....++.+++.++.++|. +.+|+|||+||+||+++ +
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~--~~-~~~~~~~~~~~~~l~~lh~---~~~ivH~Dl~p~Nili~-~ 150 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR--LL-EDPEELYDQILELMRKLYR---EAGLVHGDLSEYNILVD-D 150 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh--hc-ccHHHHHHHHHHHHHHHhh---ccCcCcCCCChhhEEEE-C
Confidence 444443 23589999999854321 111111 11 5577899999999999993 27899999999999999 8
Q ss_pred CcEEEeeeccccccC
Q 005040 565 MVAHVSDFGISKLLG 579 (717)
Q Consensus 565 ~~~kl~Dfgl~~~~~ 579 (717)
+.++++|||.+....
T Consensus 151 ~~~~liDfg~a~~~~ 165 (187)
T cd05119 151 GKVYIIDVPQAVEID 165 (187)
T ss_pred CcEEEEECccccccc
Confidence 999999999997653
No 453
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.58 E-value=1.4e-16 Score=175.86 Aligned_cols=256 Identities=21% Similarity=0.258 Sum_probs=196.1
Q ss_pred hccCCccccccccccEEEEEEEec--CCCeEEEEEechhh--HHHHHHHHHHHHHHHhcC-CCceeeEeeeeecCCeeEE
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLS--DGTNVAIKIFNLQL--ERAFRSFDSECEILRNVR-HRNLLKILGSCSNLDFKAL 500 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-hpniv~~~~~~~~~~~~~l 500 (717)
...|...+.||+|+|+.|-..... ....+|+|.+.... .........|..+-..+. |+|++.+++...+.+..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 356778888999999999888764 33446666554332 333344556777777776 9999999999999999999
Q ss_pred EEEccCCCCHHHHH-hhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC-cEEEeeecccccc
Q 005040 501 VLEFMPNGSLEKWL-YSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENM-VAHVSDFGISKLL 578 (717)
Q Consensus 501 v~e~~~~g~L~~~l-~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfgl~~~~ 578 (717)
+.+|..++++.+-+ .......+.......+.|+..++.|+|. ..+++|+|+||+|.+++..+ ..+++|||+|..+
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~---~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHP---ENGVTHRDIKPSNSLLDESGSALKIADFGLATAY 175 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCc---ccccccCCCCCccchhccCCCcccCCCchhhccc
Confidence 99999999999888 5443346667777899999999999994 46799999999999999999 9999999999988
Q ss_pred CC-CCCceeeecccc-CccccCCCccCC-CCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhh
Q 005040 579 GE-GEDSVIQTMTMA-TIGYMAPEYGSE-GIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEV 655 (717)
Q Consensus 579 ~~-~~~~~~~~~~~~-t~~y~aPE~~~~-~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (717)
.. ..........+| ++.|+|||...+ +...+..|+||.|+++.-+++|..|++........+..|........
T Consensus 176 ~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---- 251 (601)
T KOG0590|consen 176 RNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFT---- 251 (601)
T ss_pred cccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccc----
Confidence 76 444455556678 999999998777 45678899999999999999999999876555544444443321100
Q ss_pred ccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 005040 656 VDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAA 699 (717)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~ 699 (717)
............+++.+++..+|..|.+.+++.
T Consensus 252 -----------~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 252 -----------QLPWNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred -----------cCccccCChhhhhcccccccCCchhcccccccc
Confidence 001112234467889999999999999988764
No 454
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.58 E-value=1.5e-14 Score=133.25 Aligned_cols=135 Identities=22% Similarity=0.276 Sum_probs=113.6
Q ss_pred ccccccccccEEEEEEEecCCCeEEEEEechhhHHHHHHHHHHHHHHHhcCC--CceeeEeeeeecCCeeEEEEEccCCC
Q 005040 431 ECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLERAFRSFDSECEILRNVRH--RNLLKILGSCSNLDFKALVLEFMPNG 508 (717)
Q Consensus 431 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--pniv~~~~~~~~~~~~~lv~e~~~~g 508 (717)
+++.||+|.++.||++...+ ..+++|....... ...+.+|+..++.++| +.+++++++....+..+++|||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 45789999999999999854 7899999865533 4568889999999976 58999999888888899999999987
Q ss_pred CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccc
Q 005040 509 SLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKL 577 (717)
Q Consensus 509 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 577 (717)
.+..+ +......++.+++++++++|..+ ..+++|+|++|+||+++..+.++++|||.+..
T Consensus 79 ~~~~~--------~~~~~~~~~~~~~~~l~~lh~~~-~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 79 TLDEV--------SEEEKEDIAEQLAELLAKLHQLP-LLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecccC--------CHHHHHHHHHHHHHHHHHHhCCC-ceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 77543 45667778999999999999543 35799999999999999999999999998864
No 455
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.54 E-value=6.1e-14 Score=138.29 Aligned_cols=136 Identities=19% Similarity=0.227 Sum_probs=104.6
Q ss_pred ccccc-ccccEEEEEEEecCCCeEEEEEechhh------H-------HHHHHHHHHHHHHHhcCCCce--eeEeeeeecC
Q 005040 432 CNLLG-TGGFGSVYKGTLSDGTNVAIKIFNLQL------E-------RAFRSFDSECEILRNVRHRNL--LKILGSCSNL 495 (717)
Q Consensus 432 ~~~lg-~G~~g~V~~~~~~~~~~vavK~~~~~~------~-------~~~~~~~~e~~~l~~l~hpni--v~~~~~~~~~ 495 (717)
...|| .|+.|+||.+... +..++||.+.... . .....+.+|++++++++|+++ +..+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 35687 8999999999884 7788999885311 1 122457789999999998775 6677664332
Q ss_pred -C---eeEEEEEccCC-CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEe
Q 005040 496 -D---FKALVLEFMPN-GSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVS 570 (717)
Q Consensus 496 -~---~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~ 570 (717)
. ..++|||+++| .+|.+++.... ++.. .+.+++.++.+|| ..||+||||||.|||++.++.++|+
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~~--l~~~----~~~~i~~~l~~lH----~~GI~HrDlkp~NILv~~~~~v~LI 184 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEAP--LSEE----QWQAIGQLIARFH----DAGVYHADLNAHNILLDPDGKFWLI 184 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcCC--CCHH----HHHHHHHHHHHHH----HCCCCCCCCCchhEEEcCCCCEEEE
Confidence 2 23599999997 69999887532 4443 3568999999999 6899999999999999999999999
Q ss_pred eecccccc
Q 005040 571 DFGISKLL 578 (717)
Q Consensus 571 Dfgl~~~~ 578 (717)
|||.+...
T Consensus 185 Dfg~~~~~ 192 (239)
T PRK01723 185 DFDRGELR 192 (239)
T ss_pred ECCCcccC
Confidence 99988753
No 456
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.48 E-value=1.6e-15 Score=155.88 Aligned_cols=176 Identities=32% Similarity=0.523 Sum_probs=112.7
Q ss_pred cCCCCEEeccCCcccccCCccccCCCCCCEEeccCCcCcccCCccccCCCCCCeEEecCccccCCCChhhhcccCCCeEE
Q 005040 140 LQQLQGFYVPENNLQGYVPHDLCHLERLNILNLSGNKLSGAIPQCLASLTSLRSLYLQSNKLSSSLPSSLWSLEYILRIN 219 (717)
Q Consensus 140 l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 219 (717)
+..-...+|+.|++. ++|..++.+-.|+.|.|..|.+. .+|..+.++..|..|+|+.|+++ .+|..++.++ |+.|.
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli 149 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLI 149 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEE
Confidence 333445566666666 45555666666666666666666 55666666666666666666666 5555555555 66666
Q ss_pred ccCCcCcccCCccccCCCCCCeEEccCCCCCCCCcccccCCcccccccccCccccCCCCccccccCccceEeccCCCCCC
Q 005040 220 LSSNSLKGTLPSNIQKLNVLIDLDLSRNQLSSDIPSTIGTLKNLETLSLAGNQFQGPIPESVGNLISLESLDFSNNNLSG 299 (717)
Q Consensus 220 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~~ 299 (717)
+++|+++ .+|..++.+..|..||.+.|.+.. .|..++++.+|+.|++..|++. ..|..++.+ .|..||++.|+++
T Consensus 150 ~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~s-lpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis- 224 (722)
T KOG0532|consen 150 VSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQS-LPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS- 224 (722)
T ss_pred EecCccc-cCCcccccchhHHHhhhhhhhhhh-chHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-
Confidence 6666666 566666666666677777776663 5556666777777777777766 455555544 3666777777776
Q ss_pred CCcccccccccccEEEccCCccccc
Q 005040 300 KIPKSLEALSHLKQFNVSHNRLEGE 324 (717)
Q Consensus 300 ~~~~~~~~l~~L~~L~l~~N~l~~~ 324 (717)
.+|-.|..|..|++|-|.+|+|+..
T Consensus 225 ~iPv~fr~m~~Lq~l~LenNPLqSP 249 (722)
T KOG0532|consen 225 YLPVDFRKMRHLQVLQLENNPLQSP 249 (722)
T ss_pred ecchhhhhhhhheeeeeccCCCCCC
Confidence 6667777777777777777777643
No 457
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.48 E-value=2.6e-15 Score=154.29 Aligned_cols=194 Identities=29% Similarity=0.434 Sum_probs=108.0
Q ss_pred EEEcccccccCccCCcccccccccccCccCCcEEeccCCCCcccCCcchhccccccceeeecCCcceecCCccccCCCCC
Q 005040 40 VLSLMMNNLTTESSSADQWSFLSSLTNCRNLANLALASNPLGGILPPLIGNFSASLQNIYAFECKLGGSIPKEIGNLRGL 119 (717)
Q Consensus 40 ~L~L~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L 119 (717)
.|.|++-+++..+.++.. ..+..-...||+.|++. .+|..++.+ ..|+.|.|+.|.+. .+|..+.++..|
T Consensus 54 ~l~Ls~rrlk~fpr~a~~-------~~ltdt~~aDlsrNR~~-elp~~~~~f-~~Le~liLy~n~~r-~ip~~i~~L~~l 123 (722)
T KOG0532|consen 54 RLLLSGRRLKEFPRGAAS-------YDLTDTVFADLSRNRFS-ELPEEACAF-VSLESLILYHNCIR-TIPEAICNLEAL 123 (722)
T ss_pred ccccccchhhcCCCcccc-------ccccchhhhhccccccc-cCchHHHHH-HHHHHHHHHhccce-ecchhhhhhhHH
Confidence 466677777776655411 35556667788888887 566666665 45666666666666 556666666666
Q ss_pred cEEEccCCCCcccCCccccccCCCCEEeccCCcccccCCccccCCCCCCEEeccCCcCcccCCccccCCCCCCeEEecCc
Q 005040 120 IVLSLGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPHDLCHLERLNILNLSGNKLSGAIPQCLASLTSLRSLYLQSN 199 (717)
Q Consensus 120 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 199 (717)
++|||+.|++. ..|..++.|+ |+.|-+++|+++ .+|..++.++.|..||.+.|
T Consensus 124 t~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-------------------------~lp~~ig~~~tl~~ld~s~n 176 (722)
T KOG0532|consen 124 TFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-------------------------SLPEEIGLLPTLAHLDVSKN 176 (722)
T ss_pred HHhhhccchhh-cCChhhhcCc-ceeEEEecCccc-------------------------cCCcccccchhHHHhhhhhh
Confidence 66666666666 4444444443 444555555554 34444444444445555555
Q ss_pred cccCCCChhhhcccCCCeEEccCCcCcccCCccccCCCCCCeEEccCCCCCCCCcccccCCcccccccccCcccc
Q 005040 200 KLSSSLPSSLWSLEYILRINLSSNSLKGTLPSNIQKLNVLIDLDLSRNQLSSDIPSTIGTLKNLETLSLAGNQFQ 274 (717)
Q Consensus 200 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 274 (717)
.+. .+|.-+..+.+|+.|.+..|++. .+|..+..++ |..||+|.|+++ .+|..|..|..|++|-|.+|+++
T Consensus 177 ei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~Lp-Li~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 177 EIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLP-LIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred hhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCc-eeeeecccCcee-ecchhhhhhhhheeeeeccCCCC
Confidence 444 33444444555555555555544 3344444333 555555555555 35555555555555555555555
No 458
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.47 E-value=8.1e-14 Score=149.92 Aligned_cols=199 Identities=34% Similarity=0.480 Sum_probs=115.7
Q ss_pred EEeccCCCCcccCCcchhccccccceeeecCCcceecCCccccCCC-CCcEEEccCCCCcccCCccccccCCCCEEeccC
Q 005040 72 NLALASNPLGGILPPLIGNFSASLQNIYAFECKLGGSIPKEIGNLR-GLIVLSLGFNDLNGTIPTSIGTLQQLQGFYVPE 150 (717)
Q Consensus 72 ~L~L~~N~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~ 150 (717)
.|++..|++... ...+..+ +.+..|++.+|++. .++.....+. +|+.|++++|.+. .+|..+..+++|+.|++++
T Consensus 97 ~l~~~~~~~~~~-~~~~~~~-~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~ 172 (394)
T COG4886 97 SLDLNLNRLRSN-ISELLEL-TNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSF 172 (394)
T ss_pred eeeccccccccC-chhhhcc-cceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCC
Confidence 455555555312 1122222 34566666666665 3444444443 6666677766666 3445566666777777777
Q ss_pred CcccccCCccccCCCCCCEEeccCCcCcccCCccccCCCCCCeEEecCccccCCCChhhhcccCCCeEEccCCcCcccCC
Q 005040 151 NNLQGYVPHDLCHLERLNILNLSGNKLSGAIPQCLASLTSLRSLYLQSNKLSSSLPSSLWSLEYILRINLSSNSLKGTLP 230 (717)
Q Consensus 151 n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 230 (717)
|++... +.....+++|+.|++++|+++ .+|........|++|.+++|.+. ..+..+..+.++..|.+.+|++. ..+
T Consensus 173 N~l~~l-~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~ 248 (394)
T COG4886 173 NDLSDL-PKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLP 248 (394)
T ss_pred chhhhh-hhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-ecc
Confidence 776633 333335666677777777776 34443334445667777777433 34455666666666666666666 335
Q ss_pred ccccCCCCCCeEEccCCCCCCCCcccccCCcccccccccCccccCCCCcc
Q 005040 231 SNIQKLNVLIDLDLSRNQLSSDIPSTIGTLKNLETLSLAGNQFQGPIPES 280 (717)
Q Consensus 231 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 280 (717)
..++.+++|+.|++++|.++...+ ++.+.+|+.|++++|.+....+..
T Consensus 249 ~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 249 ESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred chhccccccceecccccccccccc--ccccCccCEEeccCccccccchhh
Confidence 566666667777777777764333 666677777777777666544443
No 459
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.45 E-value=3.2e-15 Score=145.36 Aligned_cols=200 Identities=21% Similarity=0.237 Sum_probs=127.9
Q ss_pred cccCCCCCcEEEccCCCCcccCCcc----ccccCCCCEEeccCCcccccCCccccCCCCCCEEeccCCcCcccCCccccC
Q 005040 112 EIGNLRGLIVLSLGFNDLNGTIPTS----IGTLQQLQGFYVPENNLQGYVPHDLCHLERLNILNLSGNKLSGAIPQCLAS 187 (717)
Q Consensus 112 ~~~~l~~L~~L~L~~n~l~~~~~~~----~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 187 (717)
++-..++|++||||+|.+....+.. +.++..|++|+|.+|.+.......++. .|..|. .|+ ..+.
T Consensus 87 aL~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~--~~k-------k~~~ 155 (382)
T KOG1909|consen 87 ALLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA--VNK-------KAAS 155 (382)
T ss_pred HHhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH--HHh-------ccCC
Confidence 3444556777777777665333322 234555666666666655333222221 111111 111 1223
Q ss_pred CCCCCeEEecCccccCC----CChhhhcccCCCeEEccCCcCccc----CCccccCCCCCCeEEccCCCCCCCC----cc
Q 005040 188 LTSLRSLYLQSNKLSSS----LPSSLWSLEYILRINLSSNSLKGT----LPSNIQKLNVLIDLDLSRNQLSSDI----PS 255 (717)
Q Consensus 188 l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~----~~ 255 (717)
-+.|+.+..++|++... +...|...+.|+.+.+++|.|... +...|..+++|+.|||.+|-++... ..
T Consensus 156 ~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~Lak 235 (382)
T KOG1909|consen 156 KPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAK 235 (382)
T ss_pred CcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHH
Confidence 35678888888877743 234566677888888888887632 2346788889999999999887533 34
Q ss_pred cccCCcccccccccCccccCCCCcccc-----ccCccceEeccCCCCCC----CCcccccccccccEEEccCCccc
Q 005040 256 TIGTLKNLETLSLAGNQFQGPIPESVG-----NLISLESLDFSNNNLSG----KIPKSLEALSHLKQFNVSHNRLE 322 (717)
Q Consensus 256 ~~~~l~~L~~L~l~~N~l~~~~~~~~~-----~l~~L~~L~L~~N~~~~----~~~~~~~~l~~L~~L~l~~N~l~ 322 (717)
.+..|++|++|++++|.+......+|. ..|+|+.|.|.+|.|+. .+.......+.|..|+|++|.+.
T Consensus 236 aL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 236 ALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 566788899999999988876665552 46889999999998874 22334556788999999999984
No 460
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.45 E-value=2.3e-15 Score=146.33 Aligned_cols=259 Identities=20% Similarity=0.237 Sum_probs=157.6
Q ss_pred ccCCCCCcEEECCCCcceec----CCcCCCCCCCCCEEEcccccccCccCCccc--ccccccccCccCCcEEeccCCCCc
Q 005040 8 ITNATKLIGLDLGLNSFSGH----IPNTFGNLRHLSVLSLMMNNLTTESSSADQ--WSFLSSLTNCRNLANLALASNPLG 81 (717)
Q Consensus 8 ~~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~~~~~~l~~l~~L~~L~L~~N~l~ 81 (717)
+..+..++.|+||+|.+... +.+.+...++|+..++++=-..-....+.. -.+.+.+...++|++|+||.|.+.
T Consensus 26 ~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G 105 (382)
T KOG1909|consen 26 LEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFG 105 (382)
T ss_pred hcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccC
Confidence 45667778888888877633 333455666777777765422221111100 012233556667888888888877
Q ss_pred ccCCcchhccccccceeeecCCcceecCCccccCCCCCcEEEccCCCCcccCCccccccCCCCEEeccCCcccccCCccc
Q 005040 82 GILPPLIGNFSASLQNIYAFECKLGGSIPKEIGNLRGLIVLSLGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPHDL 161 (717)
Q Consensus 82 ~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~ 161 (717)
...++.|..+ +.++..|+.|.|.+|.+.-..-..++. .|..|. .|+..
T Consensus 106 ~~g~~~l~~l---------------------l~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~--~~kk~------- 153 (382)
T KOG1909|consen 106 PKGIRGLEEL---------------------LSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA--VNKKA------- 153 (382)
T ss_pred ccchHHHHHH---------------------HHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH--HHhcc-------
Confidence 6666666655 455789999999999987332222221 122222 12111
Q ss_pred cCCCCCCEEeccCCcCcccC----CccccCCCCCCeEEecCccccCC----CChhhhcccCCCeEEccCCcCccc----C
Q 005040 162 CHLERLNILNLSGNKLSGAI----PQCLASLTSLRSLYLQSNKLSSS----LPSSLWSLEYILRINLSSNSLKGT----L 229 (717)
Q Consensus 162 ~~l~~L~~L~L~~n~l~~~~----~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~----~ 229 (717)
..-+.|+++...+|++.... ...|...+.|+.+.++.|.|... +...|..+++|+.|||.+|-++.. +
T Consensus 154 ~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~L 233 (382)
T KOG1909|consen 154 ASKPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVAL 233 (382)
T ss_pred CCCcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHH
Confidence 12246777777777765322 23455566777777777777622 234566777777777777777632 3
Q ss_pred CccccCCCCCCeEEccCCCCCCCCcccc-----cCCcccccccccCccccCCC----CccccccCccceEeccCCCCC
Q 005040 230 PSNIQKLNVLIDLDLSRNQLSSDIPSTI-----GTLKNLETLSLAGNQFQGPI----PESVGNLISLESLDFSNNNLS 298 (717)
Q Consensus 230 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~-----~~l~~L~~L~l~~N~l~~~~----~~~~~~l~~L~~L~L~~N~~~ 298 (717)
...++.+++|++|++++|.++......| ...++|+.|.|.+|.|+... ...+...+.|+.|+|++|.+.
T Consensus 234 akaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 234 AKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 3456777788888888888876554443 23678888888888876422 223445677888888888883
No 461
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.44 E-value=1.6e-13 Score=147.63 Aligned_cols=264 Identities=29% Similarity=0.405 Sum_probs=186.9
Q ss_pred EEEcccccccCccCCcccccccccccCccCCcEEeccCCCCcccCCcchhccccccceeeecCCcceecCCccccCCCCC
Q 005040 40 VLSLMMNNLTTESSSADQWSFLSSLTNCRNLANLALASNPLGGILPPLIGNFSASLQNIYAFECKLGGSIPKEIGNLRGL 119 (717)
Q Consensus 40 ~L~L~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L 119 (717)
.|+++.|.+..... .+..++.++.|++.+|.++. +++.......+|+.|++++|++. .+|..+..+++|
T Consensus 97 ~l~~~~~~~~~~~~---------~~~~~~~l~~L~l~~n~i~~-i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L 165 (394)
T COG4886 97 SLDLNLNRLRSNIS---------ELLELTNLTSLDLDNNNITD-IPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNL 165 (394)
T ss_pred eeeccccccccCch---------hhhcccceeEEecCCccccc-Cccccccchhhcccccccccchh-hhhhhhhccccc
Confidence 68888888733221 24566788899999998884 44444433126899999999988 555678999999
Q ss_pred cEEEccCCCCcccCCccccccCCCCEEeccCCcccccCCccccCCCCCCEEeccCCcCcccCCccccCCCCCCeEEecCc
Q 005040 120 IVLSLGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPHDLCHLERLNILNLSGNKLSGAIPQCLASLTSLRSLYLQSN 199 (717)
Q Consensus 120 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 199 (717)
+.|++++|++. .++...+.+++|+.|++++|+++. +|.....+..|++|.+++|.+. ..+..+.++.++..|.+.+|
T Consensus 166 ~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~~-l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n 242 (394)
T COG4886 166 KNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKISD-LPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNN 242 (394)
T ss_pred cccccCCchhh-hhhhhhhhhhhhhheeccCCcccc-CchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCc
Confidence 99999999999 556556689999999999999995 4554456667999999999654 35667888999999999999
Q ss_pred cccCCCChhhhcccCCCeEEccCCcCcccCCccccCCCCCCeEEccCCCCCCCCcccccCCcccccccccCccccCCCCc
Q 005040 200 KLSSSLPSSLWSLEYILRINLSSNSLKGTLPSNIQKLNVLIDLDLSRNQLSSDIPSTIGTLKNLETLSLAGNQFQGPIPE 279 (717)
Q Consensus 200 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 279 (717)
++. ..+..+..+++|++|++++|.++...+ +..+.+|+.|++++|.+....+...........+. . +.+. ..+.
T Consensus 243 ~~~-~~~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~~~~~~~~~~~~-~-~~~~-~~~~ 316 (394)
T COG4886 243 KLE-DLPESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLIALLLLLLELLL-N-LLLT-LKAL 316 (394)
T ss_pred eee-eccchhccccccceecccccccccccc--ccccCccCEEeccCccccccchhhhccchhHHhhh-h-hhhh-cccc
Confidence 998 447788899999999999999995433 99999999999999999976666554433322222 2 3332 2222
Q ss_pred cccccCccceEeccCCCCCCCCcccccccccccEEEccCCccccc
Q 005040 280 SVGNLISLESLDFSNNNLSGKIPKSLEALSHLKQFNVSHNRLEGE 324 (717)
Q Consensus 280 ~~~~l~~L~~L~L~~N~~~~~~~~~~~~l~~L~~L~l~~N~l~~~ 324 (717)
.+.....+....+..+... ..+..+.....+..++...+.....
T Consensus 317 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (394)
T COG4886 317 ELKLNSILLNNNILSNGET-SSPEALSILESLNNLWTLDNALDES 360 (394)
T ss_pred ccccccccccccccccccc-ccchhhcccccccCceecccccccc
Confidence 2233333444444555554 4455555555566666666555443
No 462
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.44 E-value=7.8e-13 Score=141.92 Aligned_cols=144 Identities=21% Similarity=0.283 Sum_probs=100.7
Q ss_pred ccCCccccccccccEEEEEEEecCCCeEEEEEechhhHHHH---------------------------------------
Q 005040 427 DEFNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLERAF--------------------------------------- 467 (717)
Q Consensus 427 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~--------------------------------------- 467 (717)
..|+ .+.||.|++|.||+|+.++|+.||||+.++...+..
T Consensus 118 ~~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ 196 (437)
T TIGR01982 118 AEFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRR 196 (437)
T ss_pred hhCC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHH
Confidence 3444 367999999999999999999999999865421110
Q ss_pred -HHHHHHHHHHHhcC-----CCceeeEeeee-ecCCeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHH-HHHH
Q 005040 468 -RSFDSECEILRNVR-----HRNLLKILGSC-SNLDFKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGS-ALEY 539 (717)
Q Consensus 468 -~~~~~e~~~l~~l~-----hpniv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~-~l~~ 539 (717)
-+|..|.+.+.+++ ++++ .+-..+ ......++||||++|++|.++........+ +..++..++. .+..
T Consensus 197 Eldf~~Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~q 272 (437)
T TIGR01982 197 ELDLRREAANASELGENFKNDPGV-YVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQ 272 (437)
T ss_pred HHCHHHHHHHHHHHHHhcCCCCCE-EeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHH
Confidence 02444555555552 3433 222222 223446999999999999887754321122 3446666665 4677
Q ss_pred HhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccC
Q 005040 540 LHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLG 579 (717)
Q Consensus 540 LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 579 (717)
+| ..|++|+|++|.||+++.++.++++|||++..+.
T Consensus 273 l~----~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 273 VL----RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HH----hCCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 78 6789999999999999999999999999998764
No 463
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.41 E-value=2.9e-12 Score=135.90 Aligned_cols=166 Identities=16% Similarity=0.182 Sum_probs=129.2
Q ss_pred cCCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHH
Q 005040 449 SDGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILQRLN 528 (717)
Q Consensus 449 ~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~ 528 (717)
.++.+|.|..++...........+-++.|+.++||||+++++.++..+..|+|+|.+. .|..++.+.+ ...+.-
T Consensus 35 ~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~----~~~v~~ 108 (690)
T KOG1243|consen 35 ADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG----KEEVCL 108 (690)
T ss_pred ccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH----HHHHHH
Confidence 4788888888765555555667778899999999999999999999999999999985 6888887643 455666
Q ss_pred HHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCceeeeccccCccccCCCccCCCCcC
Q 005040 529 IMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSVIQTMTMATIGYMAPEYGSEGIVS 608 (717)
Q Consensus 529 i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~ 608 (717)
.+.||+.||.|||+ ..+++|++|....|+++..|..||++|.++........ ......--..|..|+.+....
T Consensus 109 Gl~qIl~AL~FL~~---d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~s~-- 181 (690)
T KOG1243|consen 109 GLFQILAALSFLND---DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEIDPSE-- 181 (690)
T ss_pred HHHHHHHHHHHHhc---cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcCccc--
Confidence 88999999999996 45799999999999999999999999998865432221 111122233466776543322
Q ss_pred cccchhhHHHHHHHHHhCC
Q 005040 609 TKCDVYSYGVLLMETFTEK 627 (717)
Q Consensus 609 ~~~Dvws~G~il~el~tg~ 627 (717)
-..|.|.||++++|++.|.
T Consensus 182 ~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 182 WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred cchhhhhHHHHHHHHhCcc
Confidence 3469999999999999993
No 464
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.40 E-value=3.7e-13 Score=129.82 Aligned_cols=202 Identities=19% Similarity=0.291 Sum_probs=140.2
Q ss_pred HHHhcCCCceeeEeeeeecC-----CeeEEEEEccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC
Q 005040 476 ILRNVRHRNLLKILGSCSNL-----DFKALVLEFMPNGSLEKWLYS---HNYFLDILQRLNIMIDVGSALEYLHHCHSSA 547 (717)
Q Consensus 476 ~l~~l~hpniv~~~~~~~~~-----~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ 547 (717)
-+-++-|.|++++..|+.+. ....+++|||..|++.++|++ ....+....-.+|+.||..||.|||.+ ++
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~--~P 197 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC--DP 197 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc--CC
Confidence 34455799999999998654 356889999999999999984 344577777888999999999999975 57
Q ss_pred CeEecCCCCCCeeeCCCCcEEEeeeccccccCCCC--CceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHh
Q 005040 548 PIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGE--DSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFT 625 (717)
Q Consensus 548 ~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~--~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~t 625 (717)
+|+|+++.-+-|++..+|-+|++--.-........ .........+-++|.+||+...-..+..+|||+||+...||..
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai 277 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI 277 (458)
T ss_pred ccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence 89999999999999999999886422211110000 0111122346788999999888888889999999999999988
Q ss_pred CCCCCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 005040 626 EKKPTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAK 701 (717)
Q Consensus 626 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~ 701 (717)
+..--... ...... ...+..++.. ...+. -..++.+|+...|..||+|.+++..
T Consensus 278 lEiq~tns-eS~~~~--------ee~ia~~i~~--------len~l-----qr~~i~kcl~~eP~~rp~ar~llfH 331 (458)
T KOG1266|consen 278 LEIQSTNS-ESKVEV--------EENIANVIIG--------LENGL-----QRGSITKCLEGEPNGRPDARLLLFH 331 (458)
T ss_pred heeccCCC-cceeeh--------hhhhhhheee--------ccCcc-----ccCcCcccccCCCCCCcchhhhhcC
Confidence 77542111 000000 0011111100 00100 1368899999999999999998654
No 465
>PLN03150 hypothetical protein; Provisional
Probab=99.40 E-value=6.8e-13 Score=149.10 Aligned_cols=118 Identities=36% Similarity=0.661 Sum_probs=100.7
Q ss_pred CCCeEEccCCCCCCCCcccccCCcccccccccCccccCCCCccccccCccceEeccCCCCCCCCcccccccccccEEEcc
Q 005040 238 VLIDLDLSRNQLSSDIPSTIGTLKNLETLSLAGNQFQGPIPESVGNLISLESLDFSNNNLSGKIPKSLEALSHLKQFNVS 317 (717)
Q Consensus 238 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~~~~~~~~~~l~~L~~L~l~ 317 (717)
.++.|+|++|.+++.+|..++.+++|+.|+|++|.+.+.+|..++.+++|+.|+|++|++++.+|..+..+++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 37889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccccc--ccccccccccccCCccccCCCCCCCCCCC
Q 005040 318 HNRLEGEIPVK--GSFKDFSAQSYFGNYALCGPPRLQVPPCK 357 (717)
Q Consensus 318 ~N~l~~~~p~~--~~~~~~~~~~~~~n~~~c~~~~~~~~~c~ 357 (717)
+|+++|.+|.. ..+..+..+.+.+|+.+|+.+. ..+|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~--l~~C~ 538 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG--LRACG 538 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCC--CCCCc
Confidence 99999998864 1122344567889999998653 35674
No 466
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.37 E-value=6.1e-13 Score=139.97 Aligned_cols=248 Identities=22% Similarity=0.249 Sum_probs=183.4
Q ss_pred ccCCccccccc--cccEEEEEEEe--c-CCCeEEEEEechhhH--HHHHHHHHHHHHHHhc-CCCceeeEeeeeecCCee
Q 005040 427 DEFNECNLLGT--GGFGSVYKGTL--S-DGTNVAIKIFNLQLE--RAFRSFDSECEILRNV-RHRNLLKILGSCSNLDFK 498 (717)
Q Consensus 427 ~~~~~~~~lg~--G~~g~V~~~~~--~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~ 498 (717)
..|...+.+|. |.+|.||.+.. + ++..+|+|.-+..-. .....=.+|....+++ .|++.++....+.+.+..
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l 193 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL 193 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcc
Confidence 45667788999 99999999976 3 788899997433222 1222224466666666 499999999999999999
Q ss_pred EEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHH----HHHHHhhcCCCCCeEecCCCCCCeeeCCC-CcEEEeeec
Q 005040 499 ALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGS----ALEYLHHCHSSAPIIHCDLKPTNILLDEN-MVAHVSDFG 573 (717)
Q Consensus 499 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~----~l~~LH~~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg 573 (717)
|+-+|.+. .+|.++.+.....++....+....+..+ |+.++| +.+++|-|+||.||+...+ ...+++|||
T Consensus 194 fiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~h----s~~~~~~~~kp~~i~~~~~~~s~~~~df~ 268 (524)
T KOG0601|consen 194 FIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLH----SNNIVHDDLKPANIFTTSDWTSCKLTDFG 268 (524)
T ss_pred eeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccC----CCcccccccchhheecccccceeecCCcc
Confidence 99999994 7999999987777888889999999999 999999 7889999999999999999 889999999
Q ss_pred cccccCCCCCceee---eccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCcc-ccCcchHHHHHHhhCC
Q 005040 574 ISKLLGEGEDSVIQ---TMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEM-FTGEMSLRRWVKESLP 649 (717)
Q Consensus 574 l~~~~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~-~~~~~~~~~~~~~~~~ 649 (717)
+...++.+...... ....|...|++||... +.++.++|+|++|.+..+..++..+.... ...-.+++.+. .+
T Consensus 269 ~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~---ip 344 (524)
T KOG0601|consen 269 LVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY---IP 344 (524)
T ss_pred eeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc---Cc
Confidence 99988766533211 1225677899999754 56788999999999999999988764331 11111111111 00
Q ss_pred CchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 005040 650 HRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAA 700 (717)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~ 700 (717)
. +.++ ....++...+..|++.+|..|++++.+..
T Consensus 345 ~---e~~~--------------~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 345 L---EFCE--------------GGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred h---hhhc--------------CcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 0 0000 11233445888999999999999887654
No 467
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.32 E-value=3e-13 Score=128.54 Aligned_cols=134 Identities=28% Similarity=0.323 Sum_probs=106.2
Q ss_pred CCCCCeEEecCccccCCCChhhhcccCCCeEEccCCcCcccCCccccCCCCCCeEEccCCCCCCCCcccccCCccccccc
Q 005040 188 LTSLRSLYLQSNKLSSSLPSSLWSLEYILRINLSSNSLKGTLPSNIQKLNVLIDLDLSRNQLSSDIPSTIGTLKNLETLS 267 (717)
Q Consensus 188 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 267 (717)
-..|++||||+|.|+ .+.+...-++.++.|++|+|.|... ..++.+++|+.||||+|.++. .-.+-..+.+.++|.
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls~-~~Gwh~KLGNIKtL~ 358 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLAE-CVGWHLKLGNIKTLK 358 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhHh-hhhhHhhhcCEeeee
Confidence 356888999999988 5566777788899999999998843 348888999999999999885 434445678889999
Q ss_pred ccCccccCCCCccccccCccceEeccCCCCCCCC-cccccccccccEEEccCCcccccccc
Q 005040 268 LAGNQFQGPIPESVGNLISLESLDFSNNNLSGKI-PKSLEALSHLKQFNVSHNRLEGEIPV 327 (717)
Q Consensus 268 l~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~~~~-~~~~~~l~~L~~L~l~~N~l~~~~p~ 327 (717)
|++|.|.. -..+.++-+|..||+++|+|.... ...++++|.|+.|.|.+|++.+.+..
T Consensus 359 La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vdY 417 (490)
T KOG1259|consen 359 LAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVDY 417 (490)
T ss_pred hhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccchH
Confidence 99998863 345777888999999999987533 35788999999999999999886654
No 468
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.31 E-value=4.8e-13 Score=127.19 Aligned_cols=131 Identities=30% Similarity=0.396 Sum_probs=108.3
Q ss_pred CCCCCEEeccCCcCcccCCccccCCCCCCeEEecCccccCCCChhhhcccCCCeEEccCCcCcccCCccccCCCCCCeEE
Q 005040 164 LERLNILNLSGNKLSGAIPQCLASLTSLRSLYLQSNKLSSSLPSSLWSLEYILRINLSSNSLKGTLPSNIQKLNVLIDLD 243 (717)
Q Consensus 164 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 243 (717)
-+.|++||||+|.|+ .+.....-+|+++.|++|+|.|... ..+..+++|+.||||+|.++ ..-.+-..+-+++.|.
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~ 358 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLK 358 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeee
Confidence 356899999999998 5666677789999999999999844 33888999999999999998 4555667788899999
Q ss_pred ccCCCCCCCCcccccCCcccccccccCccccCCC-CccccccCccceEeccCCCCCCC
Q 005040 244 LSRNQLSSDIPSTIGTLKNLETLSLAGNQFQGPI-PESVGNLISLESLDFSNNNLSGK 300 (717)
Q Consensus 244 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~L~L~~N~~~~~ 300 (717)
|++|.|.+. ..+..+-+|..||+++|+|.... ...++++|-|+++.|.+|++.+.
T Consensus 359 La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~ 414 (490)
T KOG1259|consen 359 LAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGS 414 (490)
T ss_pred hhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcccc
Confidence 999999752 44778889999999999997432 35689999999999999999854
No 469
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.30 E-value=2.4e-13 Score=135.99 Aligned_cols=212 Identities=22% Similarity=0.170 Sum_probs=106.1
Q ss_pred CCCCCcEEECCCCcceecCC-cCCCCCCCCCEEEcccccccCccCCcccccccccccCccCCcEEeccCCCCcccCCcch
Q 005040 10 NATKLIGLDLGLNSFSGHIP-NTFGNLRHLSVLSLMMNNLTTESSSADQWSFLSSLTNCRNLANLALASNPLGGILPPLI 88 (717)
Q Consensus 10 ~l~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~ 88 (717)
++.+|+...|.++.+..... .....+++++.|||++|-+....+ ...-...|++|+.|+|+.|++........
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~------v~~i~eqLp~Le~LNls~Nrl~~~~~s~~ 192 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFP------VLKIAEQLPSLENLNLSSNRLSNFISSNT 192 (505)
T ss_pred hHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHH------HHHHHHhcccchhcccccccccCCccccc
Confidence 45556666666665552211 244556666666666665554332 12224456666666666666553222222
Q ss_pred hccccccceeeecCCcceecCCccccCCCCCcEEEccCCCCcccC-CccccccCCCCEEeccCCcccccCCccccCCCCC
Q 005040 89 GNFSASLQNIYAFECKLGGSIPKEIGNLRGLIVLSLGFNDLNGTI-PTSIGTLQQLQGFYVPENNLQGYVPHDLCHLERL 167 (717)
Q Consensus 89 ~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L 167 (717)
.. .+++|+.|.|+.|.++... -..+..+|+|+.|+|..|.....-.....-+..|
T Consensus 193 ~~------------------------~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L 248 (505)
T KOG3207|consen 193 TL------------------------LLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTL 248 (505)
T ss_pred hh------------------------hhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHH
Confidence 22 3345555555555554111 1122345555555555553222222333444556
Q ss_pred CEEeccCCcCcccC-CccccCCCCCCeEEecCccccCC-CChh-----hhcccCCCeEEccCCcCccc-CCccccCCCCC
Q 005040 168 NILNLSGNKLSGAI-PQCLASLTSLRSLYLQSNKLSSS-LPSS-----LWSLEYILRINLSSNSLKGT-LPSNIQKLNVL 239 (717)
Q Consensus 168 ~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~-~~~~-----~~~l~~L~~L~l~~N~l~~~-~~~~~~~l~~L 239 (717)
+.|||++|.+-... -...+.++.|+.|+++.|.+.++ .|+. ...+++|++|++..|+|... .-..+..+++|
T Consensus 249 ~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nl 328 (505)
T KOG3207|consen 249 QELDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENL 328 (505)
T ss_pred hhccccCCcccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchh
Confidence 66666666554222 12344556666666666665532 1221 23456677777777776421 11244556667
Q ss_pred CeEEccCCCCCC
Q 005040 240 IDLDLSRNQLSS 251 (717)
Q Consensus 240 ~~L~l~~N~l~~ 251 (717)
+.|.+..|.++.
T Consensus 329 k~l~~~~n~ln~ 340 (505)
T KOG3207|consen 329 KHLRITLNYLNK 340 (505)
T ss_pred hhhhcccccccc
Confidence 777777777764
No 470
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.30 E-value=2.4e-13 Score=146.31 Aligned_cols=246 Identities=24% Similarity=0.320 Sum_probs=140.5
Q ss_pred CccCCcEEeccCCCCcccCCcchhccccccceeeecCCcceecCCccccCCCCCcEEEccCCCCcccCCccccccCCCCE
Q 005040 66 NCRNLANLALASNPLGGILPPLIGNFSASLQNIYAFECKLGGSIPKEIGNLRGLIVLSLGFNDLNGTIPTSIGTLQQLQG 145 (717)
Q Consensus 66 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 145 (717)
.+..++.+.+..|.+.. .-..+..+ .+|..|++.+|+|..+ ...+..+++|++|+|++|.|+.+ ..+..++.|+.
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~-~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~ 144 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKL-KSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKL--EGLSTLTLLKE 144 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccc-cceeeeeccccchhhc-ccchhhhhcchheeccccccccc--cchhhccchhh
Confidence 34444555555555552 11112222 3455555555555422 22256677777777777777644 34566666777
Q ss_pred EeccCCcccccCCccccCCCCCCEEeccCCcCcccCC-ccccCCCCCCeEEecCccccCCCChhhhcccCCCeEEccCCc
Q 005040 146 FYVPENNLQGYVPHDLCHLERLNILNLSGNKLSGAIP-QCLASLTSLRSLYLQSNKLSSSLPSSLWSLEYILRINLSSNS 224 (717)
Q Consensus 146 L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 224 (717)
|++++|.|..+ ..+..+..|+.+++++|++....+ . ...+.+|+.+++.+|.+... ..+..+..+..+++..|.
T Consensus 145 L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n~ 219 (414)
T KOG0531|consen 145 LNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLDNK 219 (414)
T ss_pred heeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc--cchHHHHHHHHhhccccc
Confidence 77777777744 334556777777777777774433 1 45667777777777777632 334455555555777777
Q ss_pred CcccCCccccCCCC--CCeEEccCCCCCCCCcccccCCcccccccccCccccCCCCccccccCccceEeccCCCCCCC--
Q 005040 225 LKGTLPSNIQKLNV--LIDLDLSRNQLSSDIPSTIGTLKNLETLSLAGNQFQGPIPESVGNLISLESLDFSNNNLSGK-- 300 (717)
Q Consensus 225 l~~~~~~~~~~l~~--L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~~~-- 300 (717)
++..- .+..+.. |+.+++++|.+.. .+..+..+..+..|++.+|++... ..+.....+..+.+..|.+...
T Consensus 220 i~~~~--~l~~~~~~~L~~l~l~~n~i~~-~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 294 (414)
T KOG0531|consen 220 ISKLE--GLNELVMLHLRELYLSGNRISR-SPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEA 294 (414)
T ss_pred ceecc--CcccchhHHHHHHhcccCcccc-ccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhh
Confidence 76332 2222222 6777777777763 334556667777777777776532 2344455566666666665521
Q ss_pred -Cccc-ccccccccEEEccCCccccccc
Q 005040 301 -IPKS-LEALSHLKQFNVSHNRLEGEIP 326 (717)
Q Consensus 301 -~~~~-~~~l~~L~~L~l~~N~l~~~~p 326 (717)
.... ....+++..+.+..|+.....+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 295 ISQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred hhccccccccccccccccccCccccccc
Confidence 1111 4455666777777776665444
No 471
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.28 E-value=2.6e-12 Score=118.05 Aligned_cols=65 Identities=26% Similarity=0.450 Sum_probs=17.1
Q ss_pred ccCCCCCcEEEccCCCCcccCCccc-cccCCCCEEeccCCcccccCC-ccccCCCCCCEEeccCCcCc
Q 005040 113 IGNLRGLIVLSLGFNDLNGTIPTSI-GTLQQLQGFYVPENNLQGYVP-HDLCHLERLNILNLSGNKLS 178 (717)
Q Consensus 113 ~~~l~~L~~L~L~~n~l~~~~~~~~-~~l~~L~~L~l~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~ 178 (717)
+..+++|++|++++|+|+.+ ...+ ..+++|++|+|++|+|..... ..+..+++|+.|+|.+|.++
T Consensus 60 l~~L~~L~~L~L~~N~I~~i-~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 60 LPGLPRLKTLDLSNNRISSI-SEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp ----TT--EEE--SS---S--CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred ccChhhhhhcccCCCCCCcc-ccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 34445555555555555532 2222 234555555555555543211 22334444444444444444
No 472
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.28 E-value=2.2e-12 Score=118.60 Aligned_cols=124 Identities=28% Similarity=0.322 Sum_probs=33.6
Q ss_pred CCCCCeEEecCccccCCCChhhh-cccCCCeEEccCCcCcccCCccccCCCCCCeEEccCCCCCCCCcccccCCcccccc
Q 005040 188 LTSLRSLYLQSNKLSSSLPSSLW-SLEYILRINLSSNSLKGTLPSNIQKLNVLIDLDLSRNQLSSDIPSTIGTLKNLETL 266 (717)
Q Consensus 188 l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 266 (717)
..++++|+|++|+|+.+ +.+. .+.+|+.|+|++|.|+.. +.+..++.|+.|++++|.|++..+.....+++|++|
T Consensus 18 ~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L 93 (175)
T PF14580_consen 18 PVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQEL 93 (175)
T ss_dssp --------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S-CHHHHHH-TT--EE
T ss_pred ccccccccccccccccc--cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCccccchHHhCCcCCEE
Confidence 34455555555555522 1233 345555555555555532 235555556666666666654322112345566666
Q ss_pred cccCccccCCC-CccccccCccceEeccCCCCCCCC---cccccccccccEEE
Q 005040 267 SLAGNQFQGPI-PESVGNLISLESLDFSNNNLSGKI---PKSLEALSHLKQFN 315 (717)
Q Consensus 267 ~l~~N~l~~~~-~~~~~~l~~L~~L~L~~N~~~~~~---~~~~~~l~~L~~L~ 315 (717)
++++|+|.... -..+..+++|+.|+|.+|++.... ...+..+|+|+.||
T Consensus 94 ~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 94 YLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp E-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEET
T ss_pred ECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeC
Confidence 66666655321 133445566666666666665321 11345566666554
No 473
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.28 E-value=4.7e-13 Score=144.06 Aligned_cols=250 Identities=25% Similarity=0.246 Sum_probs=165.5
Q ss_pred CCCCCCCEEEcccccccCccCCcccccccccccCccCCcEEeccCCCCcccCCcchhccccccceeeecCCcceecCCcc
Q 005040 33 GNLRHLSVLSLMMNNLTTESSSADQWSFLSSLTNCRNLANLALASNPLGGILPPLIGNFSASLQNIYAFECKLGGSIPKE 112 (717)
Q Consensus 33 ~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~ 112 (717)
..+..++.+++..|.|..+. ..+..+++|+.|++.+|+|..+.. .+..+ .+|++|++++|.|+... .
T Consensus 69 ~~l~~l~~l~l~~n~i~~~~---------~~l~~~~~l~~l~l~~n~i~~i~~-~l~~~-~~L~~L~ls~N~I~~i~--~ 135 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIAKIL---------NHLSKLKSLEALDLYDNKIEKIEN-LLSSL-VNLQVLDLSFNKITKLE--G 135 (414)
T ss_pred HHhHhHHhhccchhhhhhhh---------cccccccceeeeeccccchhhccc-chhhh-hcchheecccccccccc--c
Confidence 34455555556666666521 124556666666666666663322 13333 45666666666666432 3
Q ss_pred ccCCCCCcEEEccCCCCcccCCccccccCCCCEEeccCCcccccCC-ccccCCCCCCEEeccCCcCcccCCccccCCCCC
Q 005040 113 IGNLRGLIVLSLGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVP-HDLCHLERLNILNLSGNKLSGAIPQCLASLTSL 191 (717)
Q Consensus 113 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 191 (717)
+..++.|+.|++++|.|+.+ ..+..+++|+.+++++|++..+.+ . ...+.+|+.+++.+|.+... ..+..+..+
T Consensus 136 l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l 210 (414)
T KOG0531|consen 136 LSTLTLLKELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI--EGLDLLKKL 210 (414)
T ss_pred hhhccchhhheeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc--cchHHHHHH
Confidence 56666688888888888733 456668888888888888886654 2 57778888888888888743 234555666
Q ss_pred CeEEecCccccCCCChhhhccc--CCCeEEccCCcCcccCCccccCCCCCCeEEccCCCCCCCCcccccCCccccccccc
Q 005040 192 RSLYLQSNKLSSSLPSSLWSLE--YILRINLSSNSLKGTLPSNIQKLNVLIDLDLSRNQLSSDIPSTIGTLKNLETLSLA 269 (717)
Q Consensus 192 ~~L~L~~N~l~~~~~~~~~~l~--~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 269 (717)
..+++..|.++...+ +..+. .|+.+++++|.+. ..+..+..+.++..|++.+|.+... ..+.....+..+.+.
T Consensus 211 ~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~ 285 (414)
T KOG0531|consen 211 VLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLN 285 (414)
T ss_pred HHhhcccccceeccC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccc--ccccccchHHHhccC
Confidence 666888888874322 22333 3888889999888 4446777888889999999998753 335667788888888
Q ss_pred CccccCC---CCcc-ccccCccceEeccCCCCCCCCcccc
Q 005040 270 GNQFQGP---IPES-VGNLISLESLDFSNNNLSGKIPKSL 305 (717)
Q Consensus 270 ~N~l~~~---~~~~-~~~l~~L~~L~L~~N~~~~~~~~~~ 305 (717)
.|.+... .... .+..+.++.+.+..|.+....+...
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (414)
T KOG0531|consen 286 DNKLALSEAISQEYITSAAPTLVTLTLELNPIRKISSLDL 325 (414)
T ss_pred cchhcchhhhhccccccccccccccccccCcccccccccH
Confidence 8887622 1121 4567788899999998886555433
No 474
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.27 E-value=8.1e-13 Score=132.28 Aligned_cols=210 Identities=27% Similarity=0.293 Sum_probs=113.4
Q ss_pred CCCCCcEEEccCCCCcccCC-ccccccCCCCEEeccCCccccc--CCccccCCCCCCEEeccCCcCcccCCc-cccCCCC
Q 005040 115 NLRGLIVLSLGFNDLNGTIP-TSIGTLQQLQGFYVPENNLQGY--VPHDLCHLERLNILNLSGNKLSGAIPQ-CLASLTS 190 (717)
Q Consensus 115 ~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~l~~n~i~~~--~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~ 190 (717)
++.+|+...|.+..+..... .....|++++.|+|+.|-+... +......+++|+.|+|+.|++...... .-..++.
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~ 198 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSH 198 (505)
T ss_pred hHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhh
Confidence 34455555555555542111 2344555666666666555422 112234556666666666665522211 1113456
Q ss_pred CCeEEecCccccCC-CChhhhcccCCCeEEccCCcCcccCCccccCCCCCCeEEccCCCCCCCC-cccccCCcccccccc
Q 005040 191 LRSLYLQSNKLSSS-LPSSLWSLEYILRINLSSNSLKGTLPSNIQKLNVLIDLDLSRNQLSSDI-PSTIGTLKNLETLSL 268 (717)
Q Consensus 191 L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~L~l 268 (717)
|+.|.|+.|.++.. +-..+..+++|..|+|..|.....-.....-+..|++|||++|++-... -...+.++.|+.|++
T Consensus 199 lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnl 278 (505)
T KOG3207|consen 199 LKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNL 278 (505)
T ss_pred hheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhc
Confidence 66666666666611 1122335566777777776432233344455666777777777765421 134566777777777
Q ss_pred cCccccCCC-Ccc-----ccccCccceEeccCCCCCCC-CcccccccccccEEEccCCccccc
Q 005040 269 AGNQFQGPI-PES-----VGNLISLESLDFSNNNLSGK-IPKSLEALSHLKQFNVSHNRLEGE 324 (717)
Q Consensus 269 ~~N~l~~~~-~~~-----~~~l~~L~~L~L~~N~~~~~-~~~~~~~l~~L~~L~l~~N~l~~~ 324 (717)
+.+.+..+- |+. ...+++|++|+++.|+|..- .-+.+..+++|+.|....|+++-+
T Consensus 279 s~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~e 341 (505)
T KOG3207|consen 279 SSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNKE 341 (505)
T ss_pred cccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccccc
Confidence 777776422 222 24567777777777777521 123455566677777667766543
No 475
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.26 E-value=1.9e-11 Score=132.43 Aligned_cols=144 Identities=19% Similarity=0.224 Sum_probs=93.7
Q ss_pred hccCCccccccccccEEEEEEEecC-CCeEEEEEechhhHH----------------------------------HHHH-
Q 005040 426 TDEFNECNLLGTGGFGSVYKGTLSD-GTNVAIKIFNLQLER----------------------------------AFRS- 469 (717)
Q Consensus 426 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~----------------------------------~~~~- 469 (717)
-.+|+. +.||+|++|.||+|+.++ |+.||||+.++...+ ..+.
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 356776 789999999999999886 999999999754211 1111
Q ss_pred -----HHHHHHHHHhcC----CCceeeEeeeeec-CCeeEEEEEccCCCCHHHHH--hhCCC---CCCHHHHHHHHHHHH
Q 005040 470 -----FDSECEILRNVR----HRNLLKILGSCSN-LDFKALVLEFMPNGSLEKWL--YSHNY---FLDILQRLNIMIDVG 534 (717)
Q Consensus 470 -----~~~e~~~l~~l~----hpniv~~~~~~~~-~~~~~lv~e~~~~g~L~~~l--~~~~~---~~~~~~~~~i~~~i~ 534 (717)
+.+|...+.+++ +...+.+-.++.+ ....++||||++|+++.++- ...+. .+....+..++.|+
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi- 276 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV- 276 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-
Confidence 233444444432 3333333333322 33458999999999998753 33221 12222222233333
Q ss_pred HHHHHHhhcCCCCCeEecCCCCCCeeeCCCC----cEEEeeeccccccCCC
Q 005040 535 SALEYLHHCHSSAPIIHCDLKPTNILLDENM----VAHVSDFGISKLLGEG 581 (717)
Q Consensus 535 ~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfgl~~~~~~~ 581 (717)
. ..|++|+|++|.||+++.++ .+++.|||++..+.+.
T Consensus 277 ------f----~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~ 317 (537)
T PRK04750 277 ------F----RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE 317 (537)
T ss_pred ------H----hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence 2 45899999999999999888 9999999999877543
No 476
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.24 E-value=2.4e-11 Score=114.14 Aligned_cols=132 Identities=18% Similarity=0.183 Sum_probs=95.2
Q ss_pred cccccccccEEEEEEEecCCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCcee-eEeeeeecCCeeEEEEEccCCCCH
Q 005040 432 CNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLL-KILGSCSNLDFKALVLEFMPNGSL 510 (717)
Q Consensus 432 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv-~~~~~~~~~~~~~lv~e~~~~g~L 510 (717)
++.++.|.++.||+++.. ++.|++|+...... ....+..|+++++.+.+.+++ +++++.. ...++||||++|.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCcc
Confidence 457899999999999874 77899998764432 123457799999998655543 4444433 335899999999887
Q ss_pred HHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCC-CCCeEecCCCCCCeeeCCCCcEEEeeeccccc
Q 005040 511 EKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHS-SAPIIHCDLKPTNILLDENMVAHVSDFGISKL 577 (717)
Q Consensus 511 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 577 (717)
.+. . ......+.+++++++.||.... ...++|+|++|.||+++ ++.++++|||.+..
T Consensus 79 ~~~----~-----~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 79 LTE----D-----FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred ccc----c-----ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 543 0 1122356789999999994321 12369999999999999 67899999998753
No 477
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.21 E-value=2.3e-10 Score=102.25 Aligned_cols=142 Identities=22% Similarity=0.279 Sum_probs=105.6
Q ss_pred ccccccccccEEEEEEEecCCCeEEEEE-echh----h---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEE
Q 005040 431 ECNLLGTGGFGSVYKGTLSDGTNVAIKI-FNLQ----L---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVL 502 (717)
Q Consensus 431 ~~~~lg~G~~g~V~~~~~~~~~~vavK~-~~~~----~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 502 (717)
....+.+|+-+.|+++.++ |+...||. +.+. . +-..++.++|++.+.+++--.|.-..-++.+...-+++|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 4578899999999999984 66666663 3221 1 223456788999999997556655555566666678999
Q ss_pred EccCC-CCHHHHHhhCCCCC-CHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCC---cEEEeeeccccc
Q 005040 503 EFMPN-GSLEKWLYSHNYFL-DILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENM---VAHVSDFGISKL 577 (717)
Q Consensus 503 e~~~~-g~L~~~l~~~~~~~-~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~---~~kl~Dfgl~~~ 577 (717)
||++| .++.+++......- ..+.....+..|-+.+.-|| ...|+||||+++||++.+++ .+.+.|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH----~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLH----DNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhh----hCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99976 48889888543222 22333678899999999999 67899999999999997554 468999999865
No 478
>PLN03150 hypothetical protein; Provisional
Probab=99.18 E-value=6.5e-11 Score=133.18 Aligned_cols=113 Identities=38% Similarity=0.669 Sum_probs=104.0
Q ss_pred CCCeEEccCCcCcccCCccccCCCCCCeEEccCCCCCCCCcccccCCcccccccccCccccCCCCccccccCccceEecc
Q 005040 214 YILRINLSSNSLKGTLPSNIQKLNVLIDLDLSRNQLSSDIPSTIGTLKNLETLSLAGNQFQGPIPESVGNLISLESLDFS 293 (717)
Q Consensus 214 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~ 293 (717)
.++.|+|++|.+.+.+|..+..+++|+.|+|++|.+++.+|..++.+++|+.|+|++|++++.+|..++++++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 37889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccccc-ccccEEEccCCccccccc
Q 005040 294 NNNLSGKIPKSLEAL-SHLKQFNVSHNRLEGEIP 326 (717)
Q Consensus 294 ~N~~~~~~~~~~~~l-~~L~~L~l~~N~l~~~~p 326 (717)
+|++++.+|..+..+ .++..+++.+|+..|..|
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p 532 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP 532 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCC
Confidence 999999999988764 467889999998665444
No 479
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.18 E-value=3.9e-10 Score=105.91 Aligned_cols=136 Identities=20% Similarity=0.201 Sum_probs=97.7
Q ss_pred ccccccccEEEEEEEecC-------CCeEEEEEechhh------------H----------HHHHH----HHHHHHHHHh
Q 005040 433 NLLGTGGFGSVYKGTLSD-------GTNVAIKIFNLQL------------E----------RAFRS----FDSECEILRN 479 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~------------~----------~~~~~----~~~e~~~l~~ 479 (717)
..||.|.-+.||.|...+ +..+|||+.+... + ..... ..+|.+.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 579999999999998543 4789999885321 0 01122 2379999999
Q ss_pred cCC--CceeeEeeeeecCCeeEEEEEccCCCCHHH-HHhhCCCCCCHHHHHHHHHHHHHHHHHH-hhcCCCCCeEecCCC
Q 005040 480 VRH--RNLLKILGSCSNLDFKALVLEFMPNGSLEK-WLYSHNYFLDILQRLNIMIDVGSALEYL-HHCHSSAPIIHCDLK 555 (717)
Q Consensus 480 l~h--pniv~~~~~~~~~~~~~lv~e~~~~g~L~~-~l~~~~~~~~~~~~~~i~~~i~~~l~~L-H~~~~~~~ivH~dlk 555 (717)
+.. -++...+++ ...++||||+.++.+.. .+++. .++......+..+++.++..+ | ..++||||++
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~--~~~~~~~~~i~~~i~~~l~~l~H----~~glVHGDLs 152 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA--KLNDEEMKNAYYQVLSMMKQLYK----ECNLVHADLS 152 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc--ccCHHHHHHHHHHHHHHHHHHHH----hCCeecCCCC
Confidence 853 455666654 34589999997654321 22221 244556677889999999999 6 5689999999
Q ss_pred CCCeeeCCCCcEEEeeeccccccC
Q 005040 556 PTNILLDENMVAHVSDFGISKLLG 579 (717)
Q Consensus 556 ~~Nill~~~~~~kl~Dfgl~~~~~ 579 (717)
+.||+++ ++.+.++|||.+....
T Consensus 153 ~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 153 EYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred HHHEEEE-CCcEEEEECCCceeCC
Confidence 9999997 4689999999886553
No 480
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.14 E-value=3.1e-11 Score=127.28 Aligned_cols=249 Identities=19% Similarity=0.169 Sum_probs=176.3
Q ss_pred HhccCCccccccccccEEEEEEEec--CCCeEEEEEechhhHHHHHH--HHHHHHHHHhc-CCCceeeEeeeeecCCeeE
Q 005040 425 ATDEFNECNLLGTGGFGSVYKGTLS--DGTNVAIKIFNLQLERAFRS--FDSECEILRNV-RHRNLLKILGSCSNLDFKA 499 (717)
Q Consensus 425 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~--~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~ 499 (717)
-..+|..+..||.|.|+.|+....+ ++..+++|...........+ -..|+.+...+ .|.++++.+..+...+..|
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ 342 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY 342 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence 3568889999999999999998744 67788988765443222222 24566666666 5899999888888888888
Q ss_pred EEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCC-CcEEEeeecccccc
Q 005040 500 LVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDEN-MVAHVSDFGISKLL 578 (717)
Q Consensus 500 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfgl~~~~ 578 (717)
+--||++++++.....- ...+++..++++..|++.++.++| ++.++|+|+||+||++..+ +..+++|||.+..+
T Consensus 343 ip~e~~~~~s~~l~~~~-~~~~d~~~~~~~~~q~~~~l~~i~----s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~ 417 (524)
T KOG0601|consen 343 IPLEFCEGGSSSLRSVT-SQMLDEDPRLRLTAQILTALNVIH----SKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRL 417 (524)
T ss_pred CchhhhcCcchhhhhHH-HHhcCcchhhhhHHHHHhcccccc----chhhhcccccccceeeccchhhhhcccccccccc
Confidence 99999999988776632 223677788889999999999999 7899999999999999886 88999999988643
Q ss_pred CCCCCceeeeccccCcccc--CCCccCCCCcCcccchhhHHHHHHHHHhCCCCCCccccCcchHHHHHHhhCCCchhhhc
Q 005040 579 GEGEDSVIQTMTMATIGYM--APEYGSEGIVSTKCDVYSYGVLLMETFTEKKPTDEMFTGEMSLRRWVKESLPHRLTEVV 656 (717)
Q Consensus 579 ~~~~~~~~~~~~~~t~~y~--aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (717)
.-. ......+-++. +|+......+..+.|+|+||.-+.|..+|..--... ..|.. +.
T Consensus 418 ~~~-----~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~-------~~~~~---------i~ 476 (524)
T KOG0601|consen 418 AFS-----SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG-------VQSLT---------IR 476 (524)
T ss_pred cee-----cccccccccccccchhhccccccccccccccccccccccccCcccCccc-------cccee---------ee
Confidence 111 11122233344 556666777889999999999999999887532110 01110 00
Q ss_pred cccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhH
Q 005040 657 DANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMTDAAAKLRKIK 706 (717)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ev~~~L~~~~ 706 (717)
.... +........+..+...+...++..||.+.++....+-.+
T Consensus 477 ~~~~-------p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 477 SGDT-------PNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred cccc-------cCCCchHHhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence 0000 001111245678888999999999999988876655443
No 481
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.13 E-value=8.1e-10 Score=99.60 Aligned_cols=132 Identities=23% Similarity=0.298 Sum_probs=100.5
Q ss_pred ccccccccEEEEEEEecCCCeEEEEEechhh------H--HHHHHHHHHHHHHHhcCCCceeeEeeeeecCCeeEEEEEc
Q 005040 433 NLLGTGGFGSVYKGTLSDGTNVAIKIFNLQL------E--RAFRSFDSECEILRNVRHRNLLKILGSCSNLDFKALVLEF 504 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~------~--~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 504 (717)
..+++|+-+.+|.+.+. |.++++|.-.+.. . -.......|.+++++++--.|...+-+..+.+...++|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 46789999999999874 4446666432211 1 1234567899999999766665555566677778999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeecccccc
Q 005040 505 MPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLL 578 (717)
Q Consensus 505 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~ 578 (717)
++|..|.+++... ...++..+-.-+.-|| ..+|+|+|++++||.+..+. +.++|||++...
T Consensus 81 I~G~~lkd~l~~~--------~~~~~r~vG~~vg~lH----~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 81 IEGELLKDALEEA--------RPDLLREVGRLVGKLH----KAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred eCChhHHHHHHhc--------chHHHHHHHHHHHHHH----hcCeecCCCccceEEEeCCc-EEEEECCccccc
Confidence 9999999888865 2446677778888899 68999999999999998775 999999998753
No 482
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.12 E-value=8.5e-12 Score=137.95 Aligned_cols=253 Identities=22% Similarity=0.257 Sum_probs=175.1
Q ss_pred HHHHhccCCccccccccccEEEEEEEec-CCCeEEEEEechhh---HHHHHHHHHHHHHHHhcCCCceeeEeeeeecCCe
Q 005040 422 IRRATDEFNECNLLGTGGFGSVYKGTLS-DGTNVAIKIFNLQL---ERAFRSFDSECEILRNVRHRNLLKILGSCSNLDF 497 (717)
Q Consensus 422 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~ 497 (717)
.+...+.+.+.+.+.+|.++.++.+.-. .|...+.|+..... +...+....+-.++-..+||.++.....+.....
T Consensus 799 yrsS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP 878 (1205)
T KOG0606|consen 799 YRSSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSP 878 (1205)
T ss_pred ccCCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCC
Confidence 3556678888889999999999988743 45444444432221 2223334444444444567888877776666777
Q ss_pred eEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccc
Q 005040 498 KALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKL 577 (717)
Q Consensus 498 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~ 577 (717)
.++|++|+.+++|..-++..+. .+..........+.++.+||| +..+.|+|++|.|.+...+++.+++|||....
T Consensus 879 ~~L~~~~~~~~~~~Skl~~~~~-~saepaRs~i~~~vqs~e~L~----s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~ 953 (1205)
T KOG0606|consen 879 LPLVGHYLNGGDLPSKLHNSGC-LSAEPARSPILERVQSLESLH----SSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSK 953 (1205)
T ss_pred cchhhHHhccCCchhhhhcCCC-cccccccchhHHHHhhhhccc----cchhhcccccccchhhcccCCcccCccccccc
Confidence 8999999999999999987653 444445556667888999999 56699999999999999999999999984332
Q ss_pred cCCC---------------------C--------CceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCC
Q 005040 578 LGEG---------------------E--------DSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKK 628 (717)
Q Consensus 578 ~~~~---------------------~--------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~ 628 (717)
.+.. . .........+|+.|.+||...+......+|+|+.|++++|.++|.+
T Consensus 954 vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~p 1033 (1205)
T KOG0606|consen 954 VGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIP 1033 (1205)
T ss_pred cccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCC
Confidence 2100 0 0011233468999999999999999999999999999999999999
Q ss_pred CCCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHHhhccCCCCCCCCCHH
Q 005040 629 PTDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLALDCCMDTPHKRIHMT 696 (717)
Q Consensus 629 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~Rpt~~ 696 (717)
||....+... ++..+.+..+-...+...+....+++...+..+|.+|..|.
T Consensus 1034 p~na~tpq~~-----------------f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1034 PFNAETPQQI-----------------FENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCCCcchhhh-----------------hhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 9976432211 11111110000111223345567888899999999998876
No 483
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.08 E-value=7e-10 Score=109.19 Aligned_cols=143 Identities=20% Similarity=0.233 Sum_probs=109.7
Q ss_pred ccccccccEEEEEEEecCCCeEEEEEechhhH-HHHHHHHHHHHHHHhcCC--CceeeEeeeeecC---CeeEEEEEccC
Q 005040 433 NLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLE-RAFRSFDSECEILRNVRH--RNLLKILGSCSNL---DFKALVLEFMP 506 (717)
Q Consensus 433 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h--pniv~~~~~~~~~---~~~~lv~e~~~ 506 (717)
+.|+.|.++.||++...+|+.+++|+...... .....+..|.++++.+++ ..+.+++.+.... +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 57899999999999987778999998765432 134567889999999975 3456777776654 25689999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcC------------------------------------------
Q 005040 507 NGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCH------------------------------------------ 544 (717)
Q Consensus 507 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~------------------------------------------ 544 (717)
|.++.+.+.. ..++......++.+++++|.+||+..
T Consensus 84 G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (223)
T cd05154 84 GRVLRDRLLR--PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLL 161 (223)
T ss_pred CEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHH
Confidence 9888765432 23677777788888888888888531
Q ss_pred ----------CCCCeEecCCCCCCeeeCC--CCcEEEeeeccccc
Q 005040 545 ----------SSAPIIHCDLKPTNILLDE--NMVAHVSDFGISKL 577 (717)
Q Consensus 545 ----------~~~~ivH~dlk~~Nill~~--~~~~kl~Dfgl~~~ 577 (717)
....++|+|+.+.||+++. ++.+.++||+.+..
T Consensus 162 ~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 162 RWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 1245799999999999998 67789999997764
No 484
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.03 E-value=2.6e-10 Score=130.95 Aligned_cols=275 Identities=23% Similarity=0.250 Sum_probs=171.2
Q ss_pred CCCCCCEEEcccccccCccCCcccccccccccCccCCcEEeccCCC--CcccCCcchhccccccceeeecCCcceecCCc
Q 005040 34 NLRHLSVLSLMMNNLTTESSSADQWSFLSSLTNCRNLANLALASNP--LGGILPPLIGNFSASLQNIYAFECKLGGSIPK 111 (717)
Q Consensus 34 ~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~--l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~ 111 (717)
+....+...+-+|.+..++... ..++|++|-+..|. +..+.++.|..+ +.|..|||++|.-.+.+|.
T Consensus 521 ~~~~~rr~s~~~~~~~~~~~~~----------~~~~L~tLll~~n~~~l~~is~~ff~~m-~~LrVLDLs~~~~l~~LP~ 589 (889)
T KOG4658|consen 521 SWNSVRRMSLMNNKIEHIAGSS----------ENPKLRTLLLQRNSDWLLEISGEFFRSL-PLLRVLDLSGNSSLSKLPS 589 (889)
T ss_pred chhheeEEEEeccchhhccCCC----------CCCccceEEEeecchhhhhcCHHHHhhC-cceEEEECCCCCccCcCCh
Confidence 3466777788788777665432 44468888887775 553444444445 6688888887777778888
Q ss_pred cccCCCCCcEEEccCCCCcccCCccccccCCCCEEeccCCcccccCCccccCCCCCCEEeccCCcCc--ccCCccccCCC
Q 005040 112 EIGNLRGLIVLSLGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPHDLCHLERLNILNLSGNKLS--GAIPQCLASLT 189 (717)
Q Consensus 112 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~--~~~~~~~~~l~ 189 (717)
.++.|-+|++|+|++..+. .+|..+.+|+.|.+|++..+.-....+.....|++|++|.+..-... ...-..+.++.
T Consensus 590 ~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le 668 (889)
T KOG4658|consen 590 SIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLE 668 (889)
T ss_pred HHhhhhhhhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhccc
Confidence 8888888888888888888 67888888888888888887766566777777888888888765422 11222334445
Q ss_pred CCCeEEecCccccCCCChhhhcccCCC----eEEccCCcCcccCCccccCCCCCCeEEccCCCCCCCCcccccC------
Q 005040 190 SLRSLYLQSNKLSSSLPSSLWSLEYIL----RINLSSNSLKGTLPSNIQKLNVLIDLDLSRNQLSSDIPSTIGT------ 259 (717)
Q Consensus 190 ~L~~L~L~~N~l~~~~~~~~~~l~~L~----~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~------ 259 (717)
.|+.+........ +-..+..+..|. .+.+.++... ..+..+..+.+|+.|.+.++.+..........
T Consensus 669 ~L~~ls~~~~s~~--~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~ 745 (889)
T KOG4658|consen 669 HLENLSITISSVL--LLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLC 745 (889)
T ss_pred chhhheeecchhH--hHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhh
Confidence 5555544333220 111223333333 3333333333 45567778888888888888886433222111
Q ss_pred CcccccccccCccccCCCCccccccCccceEeccCCCCCCCCcccccccccccEEEccCCccccc
Q 005040 260 LKNLETLSLAGNQFQGPIPESVGNLISLESLDFSNNNLSGKIPKSLEALSHLKQFNVSHNRLEGE 324 (717)
Q Consensus 260 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~~~~~~~~~~l~~L~~L~l~~N~l~~~ 324 (717)
+++|..+...++... ..+.+.--.++|+.|++..+.....+......+..++.+-+..+.+.+.
T Consensus 746 f~~l~~~~~~~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l 809 (889)
T KOG4658|consen 746 FPNLSKVSILNCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGL 809 (889)
T ss_pred HHHHHHHHhhccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccccc
Confidence 334444444444332 2333334557888888888877766666677777777666666666554
No 485
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.02 E-value=1.5e-10 Score=132.95 Aligned_cols=292 Identities=24% Similarity=0.261 Sum_probs=192.6
Q ss_pred CCCCCcEEECCCCcceecCCcCCCCCCCCCEEEccccc--ccCccCCcccccccccccCccCCcEEeccCCCCcccCCcc
Q 005040 10 NATKLIGLDLGLNSFSGHIPNTFGNLRHLSVLSLMMNN--LTTESSSADQWSFLSSLTNCRNLANLALASNPLGGILPPL 87 (717)
Q Consensus 10 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~--l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~ 87 (717)
+....+...+-+|.+. ..+....+ ++|++|-+..|. +..++.+ .|..++.|+.|||++|.=.+.+|..
T Consensus 521 ~~~~~rr~s~~~~~~~-~~~~~~~~-~~L~tLll~~n~~~l~~is~~--------ff~~m~~LrVLDLs~~~~l~~LP~~ 590 (889)
T KOG4658|consen 521 SWNSVRRMSLMNNKIE-HIAGSSEN-PKLRTLLLQRNSDWLLEISGE--------FFRSLPLLRVLDLSGNSSLSKLPSS 590 (889)
T ss_pred chhheeEEEEeccchh-hccCCCCC-CccceEEEeecchhhhhcCHH--------HHhhCcceEEEECCCCCccCcCChH
Confidence 4466778888888887 45554444 379999999996 6665543 2788999999999999877799999
Q ss_pred hhccccccceeeecCCcceecCCccccCCCCCcEEEccCCCCcccCCccccccCCCCEEeccCCcc--cccCCccccCCC
Q 005040 88 IGNFSASLQNIYAFECKLGGSIPKEIGNLRGLIVLSLGFNDLNGTIPTSIGTLQQLQGFYVPENNL--QGYVPHDLCHLE 165 (717)
Q Consensus 88 ~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~i--~~~~~~~~~~l~ 165 (717)
++.+ -+|++|++++..+. .+|..+.+|+.|.+||+..+.-...++.....|.+|++|.+..... +...-..+.++.
T Consensus 591 I~~L-i~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le 668 (889)
T KOG4658|consen 591 IGEL-VHLRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLE 668 (889)
T ss_pred Hhhh-hhhhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhccc
Confidence 9998 68999999999999 8899999999999999998876556677777899999999877652 222333445555
Q ss_pred CCCEEeccCCcCcccCCccccCCCCCC----eEEecCccccCCCChhhhcccCCCeEEccCCcCcccCCccccC------
Q 005040 166 RLNILNLSGNKLSGAIPQCLASLTSLR----SLYLQSNKLSSSLPSSLWSLEYILRINLSSNSLKGTLPSNIQK------ 235 (717)
Q Consensus 166 ~L~~L~L~~n~l~~~~~~~~~~l~~L~----~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~------ 235 (717)
+|+.|........ +-..+..++.|+ .+.+.++... ..+..+..+.+|+.|.+.++.+.......+..
T Consensus 669 ~L~~ls~~~~s~~--~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~ 745 (889)
T KOG4658|consen 669 HLENLSITISSVL--LLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLC 745 (889)
T ss_pred chhhheeecchhH--hHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhh
Confidence 6666655443331 111123333333 4443333433 44566778889999999988886433322221
Q ss_pred CCCCCeEEccCCCCCCCCcccccCCcccccccccCccccCCCCccccccCccceEeccCCCCCCC-CcccccccccccEE
Q 005040 236 LNVLIDLDLSRNQLSSDIPSTIGTLKNLETLSLAGNQFQGPIPESVGNLISLESLDFSNNNLSGK-IPKSLEALSHLKQF 314 (717)
Q Consensus 236 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~~~-~~~~~~~l~~L~~L 314 (717)
++++..+.+.++..- ..+...--.++|+.|.+..++....+......+..+..+-+..+.+.+. .-.....++++..+
T Consensus 746 f~~l~~~~~~~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l~~~~~l~~l~~i~~~ 824 (889)
T KOG4658|consen 746 FPNLSKVSILNCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGLRMLCSLGGLPQLYWL 824 (889)
T ss_pred HHHHHHHHhhccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccccceeeecCCCCceeEec
Confidence 223333333333222 1233334468899999998887766666677777777766777777655 23444444444444
Q ss_pred Ecc
Q 005040 315 NVS 317 (717)
Q Consensus 315 ~l~ 317 (717)
.+.
T Consensus 825 ~l~ 827 (889)
T KOG4658|consen 825 PLS 827 (889)
T ss_pred ccC
Confidence 333
No 486
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.96 E-value=2.6e-11 Score=114.08 Aligned_cols=201 Identities=19% Similarity=0.152 Sum_probs=108.4
Q ss_pred cccCCCCCcEEEccCCCCcccCCc----cccccCCCCEEeccCCcccccCCccccCCCCCCEEeccCCcCcccCCccccC
Q 005040 112 EIGNLRGLIVLSLGFNDLNGTIPT----SIGTLQQLQGFYVPENNLQGYVPHDLCHLERLNILNLSGNKLSGAIPQCLAS 187 (717)
Q Consensus 112 ~~~~l~~L~~L~L~~n~l~~~~~~----~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 187 (717)
.+-.+++|+..+||+|.+....|. .+++-..|++|.|++|.+..+...-++.. |. .|..|+ -.++
T Consensus 87 aLlkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigka--l~--~la~nK-------Kaa~ 155 (388)
T COG5238 87 ALLKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKA--LF--HLAYNK-------KAAD 155 (388)
T ss_pred HHhcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHH--HH--HHHHHh-------hhcc
Confidence 455566677777777666544433 33445556666666666553322222200 00 000000 0122
Q ss_pred CCCCCeEEecCccccCCCCh-----hhhcccCCCeEEccCCcCccc-----CCccccCCCCCCeEEccCCCCCCCC----
Q 005040 188 LTSLRSLYLQSNKLSSSLPS-----SLWSLEYILRINLSSNSLKGT-----LPSNIQKLNVLIDLDLSRNQLSSDI---- 253 (717)
Q Consensus 188 l~~L~~L~L~~N~l~~~~~~-----~~~~l~~L~~L~l~~N~l~~~-----~~~~~~~l~~L~~L~l~~N~l~~~~---- 253 (717)
-|.|+......|++.. .+. .+..-.+|+.+.+.+|.|.-. .--.+..+.+|+.|||.+|.++...
T Consensus 156 kp~Le~vicgrNRlen-gs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~L 234 (388)
T COG5238 156 KPKLEVVICGRNRLEN-GSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYL 234 (388)
T ss_pred CCCceEEEeccchhcc-CcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHH
Confidence 3556666666666552 222 222224666666666666521 1112355667778888888776432
Q ss_pred cccccCCcccccccccCccccCCCCccc------cccCccceEeccCCCCCCCCccc-----c--cccccccEEEccCCc
Q 005040 254 PSTIGTLKNLETLSLAGNQFQGPIPESV------GNLISLESLDFSNNNLSGKIPKS-----L--EALSHLKQFNVSHNR 320 (717)
Q Consensus 254 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~------~~l~~L~~L~L~~N~~~~~~~~~-----~--~~l~~L~~L~l~~N~ 320 (717)
...+..++.|++|.+..|-++.....++ ...|+|..|-+.+|-+.+-+-.. + .++|-|..|.++||+
T Consensus 235 a~al~~W~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~le~ngNr 314 (388)
T COG5238 235 ADALCEWNLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGIILDISLNEFEQDAVPLLVDLERNGNR 314 (388)
T ss_pred HHHhcccchhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcCceeeeechhhhhhcccHHHHHHHHccCc
Confidence 3345667778888888887776555443 23577788888888665422111 1 246667777777777
Q ss_pred cccc
Q 005040 321 LEGE 324 (717)
Q Consensus 321 l~~~ 324 (717)
+...
T Consensus 315 ~~E~ 318 (388)
T COG5238 315 IKEL 318 (388)
T ss_pred chhH
Confidence 7654
No 487
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.93 E-value=9.6e-10 Score=83.05 Aligned_cols=61 Identities=39% Similarity=0.516 Sum_probs=54.1
Q ss_pred CCCcEEECCCCcceecCCcCCCCCCCCCEEEcccccccCccCCcccccccccccCccCCcEEeccCCCC
Q 005040 12 TKLIGLDLGLNSFSGHIPNTFGNLRHLSVLSLMMNNLTTESSSADQWSFLSSLTNCRNLANLALASNPL 80 (717)
Q Consensus 12 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l 80 (717)
++|++|+|++|+|+.+.+..|.++++|++|++++|+|+.+++.+ |.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~--------f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDA--------FSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTT--------TTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHH--------HcCCCCCCEEeCcCCcC
Confidence 46889999999999888889999999999999999999888665 88999999999999975
No 488
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.91 E-value=9.3e-10 Score=83.13 Aligned_cols=57 Identities=33% Similarity=0.460 Sum_probs=22.2
Q ss_pred CcEEEccCCCCcccCCccccccCCCCEEeccCCcccccCCccccCCCCCCEEeccCC
Q 005040 119 LIVLSLGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPHDLCHLERLNILNLSGN 175 (717)
Q Consensus 119 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n 175 (717)
|++|++++|+|+.+.++.|.++++|++|++++|.++.+.+..|.++++|++|++++|
T Consensus 3 L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N 59 (61)
T PF13855_consen 3 LESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNN 59 (61)
T ss_dssp ESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSS
T ss_pred CcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCC
Confidence 333444444333333333333333333333333333333333333333333333333
No 489
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.91 E-value=1.2e-10 Score=109.71 Aligned_cols=257 Identities=21% Similarity=0.268 Sum_probs=160.9
Q ss_pred cCCCCCcEEECCCCcceecCC----cCCCCCCCCCEEEcccccccCccCCccc--ccccccccCccCCcEEeccCCCCcc
Q 005040 9 TNATKLIGLDLGLNSFSGHIP----NTFGNLRHLSVLSLMMNNLTTESSSADQ--WSFLSSLTNCRNLANLALASNPLGG 82 (717)
Q Consensus 9 ~~l~~L~~L~L~~n~i~~~~~----~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~~~~~~l~~l~~L~~L~L~~N~l~~ 82 (717)
..+..++.+|||+|-|...-. +.+.+-.+|+..+++.-...-....... --++..+.++++|+..+||.|.++.
T Consensus 27 ~~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~ 106 (388)
T COG5238 27 EMMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFGS 106 (388)
T ss_pred HhhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccCc
Confidence 346677777888887764433 3344556677776665433322111100 0123445677788888888887776
Q ss_pred cCCcchhccccccceeeecCCcceecCCccccCCCCCcEEEccCCCCcccCCccccccCCCCEEeccCCcccccCCcccc
Q 005040 83 ILPPLIGNFSASLQNIYAFECKLGGSIPKEIGNLRGLIVLSLGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPHDLC 162 (717)
Q Consensus 83 ~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~ 162 (717)
..|+.+..+ +++-+.|..|.|++|.+.-..-..++. .|. .|..|+- ..
T Consensus 107 ~~~e~L~d~---------------------is~~t~l~HL~l~NnGlGp~aG~rigk--al~--~la~nKK-------aa 154 (388)
T COG5238 107 EFPEELGDL---------------------ISSSTDLVHLKLNNNGLGPIAGGRIGK--ALF--HLAYNKK-------AA 154 (388)
T ss_pred ccchHHHHH---------------------HhcCCCceeEEeecCCCCccchhHHHH--HHH--HHHHHhh-------hc
Confidence 666555443 566789999999999987332222221 111 1222221 23
Q ss_pred CCCCCCEEeccCCcCcccCCc-----cccCCCCCCeEEecCccccCCC-----ChhhhcccCCCeEEccCCcCccc----
Q 005040 163 HLERLNILNLSGNKLSGAIPQ-----CLASLTSLRSLYLQSNKLSSSL-----PSSLWSLEYILRINLSSNSLKGT---- 228 (717)
Q Consensus 163 ~l~~L~~L~L~~n~l~~~~~~-----~~~~l~~L~~L~L~~N~l~~~~-----~~~~~~l~~L~~L~l~~N~l~~~---- 228 (717)
+-+.|++..+..|++.. .+. .|..-.+|+++.+..|.|.... -..+..+.+|+.|||.+|-++..
T Consensus 155 ~kp~Le~vicgrNRlen-gs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~ 233 (388)
T COG5238 155 DKPKLEVVICGRNRLEN-GSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRY 233 (388)
T ss_pred cCCCceEEEeccchhcc-CcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHH
Confidence 44678888888888763 222 2333357888888888877221 11334567888889998888732
Q ss_pred CCccccCCCCCCeEEccCCCCCCCCcccc----c--CCcccccccccCccccCCCCcc-----c--cccCccceEeccCC
Q 005040 229 LPSNIQKLNVLIDLDLSRNQLSSDIPSTI----G--TLKNLETLSLAGNQFQGPIPES-----V--GNLISLESLDFSNN 295 (717)
Q Consensus 229 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~----~--~l~~L~~L~l~~N~l~~~~~~~-----~--~~l~~L~~L~L~~N 295 (717)
+...++.++.|++|.+.+|-++......+ . ..++|+.|-..+|.+.+.+... + .++|-|..|.+.+|
T Consensus 234 La~al~~W~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~le~ngN 313 (388)
T COG5238 234 LADALCEWNLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGIILDISLNEFEQDAVPLLVDLERNGN 313 (388)
T ss_pred HHHHhcccchhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcCceeeeechhhhhhcccHHHHHHHHccC
Confidence 34466778889999999999886554433 1 2688999999999876543322 1 46788889999999
Q ss_pred CCC
Q 005040 296 NLS 298 (717)
Q Consensus 296 ~~~ 298 (717)
+|.
T Consensus 314 r~~ 316 (388)
T COG5238 314 RIK 316 (388)
T ss_pred cch
Confidence 987
No 490
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.87 E-value=6.7e-08 Score=97.29 Aligned_cols=265 Identities=11% Similarity=0.068 Sum_probs=162.1
Q ss_pred ccccccccccEEEEEEEecCCCeEEEEEechhhHHHHHHHHHHHHHHHhc-CCCceeeEeee------e-ecCCeeEEEE
Q 005040 431 ECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQLERAFRSFDSECEILRNV-RHRNLLKILGS------C-SNLDFKALVL 502 (717)
Q Consensus 431 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~~~~~------~-~~~~~~~lv~ 502 (717)
..+.||+|+-+.+|-.--- +. .+.|++.........+ .++.|... .||-+-.-+.| - .......+.|
T Consensus 15 ~gr~LgqGgea~ly~l~e~-~d-~VAKIYh~Pppa~~aq---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEV-RD-QVAKIYHAPPPAAQAQ---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCccccCCccceeeecchh-hc-hhheeecCCCchHHHH---HHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 4567999999999964321 11 2457776443211111 23334443 46543321111 0 1123356777
Q ss_pred EccCCC-CHHHHHh-----hCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeecccc
Q 005040 503 EFMPNG-SLEKWLY-----SHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISK 576 (717)
Q Consensus 503 e~~~~g-~L~~~l~-----~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~ 576 (717)
..+.+. ....+.. +.-....|....+.+..++.+.+.|| ..|.+-||+.++|+|+++++.|.|.|-..-.
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH----~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfq 165 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLH----EHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQ 165 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHH----hcCCcccccCccceeeecCceEEEEccccee
Confidence 777653 2222222 11234689999999999999999999 6789999999999999999999999866544
Q ss_pred ccCCCCCceeeeccccCccccCCCc-----cCCCCcCcccchhhHHHHHHHHHhC-CCCCCccccCc---chHH-HHHHh
Q 005040 577 LLGEGEDSVIQTMTMATIGYMAPEY-----GSEGIVSTKCDVYSYGVLLMETFTE-KKPTDEMFTGE---MSLR-RWVKE 646 (717)
Q Consensus 577 ~~~~~~~~~~~~~~~~t~~y~aPE~-----~~~~~~~~~~Dvws~G~il~el~tg-~~p~~~~~~~~---~~~~-~~~~~ 646 (717)
... ........+|...|.+||. ..+...+...|-|.+|+++++++.| ++||.+..... ..+. +....
T Consensus 166 i~~---ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g 242 (637)
T COG4248 166 INA---NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHG 242 (637)
T ss_pred ecc---CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcc
Confidence 331 1223445678999999994 3344567789999999999999886 99997632110 0111 11100
Q ss_pred hCCCchhhhccccc-hhhhhhhhhhHHHHHHHHHHHhhccCCC--CCCCCCHHHHHHHHHHhHHhhcc
Q 005040 647 SLPHRLTEVVDANL-VREEQAFSDKMDCLFSIMDLALDCCMDT--PHKRIHMTDAAAKLRKIKAKFLD 711 (717)
Q Consensus 647 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~~--P~~Rpt~~ev~~~L~~~~~~~~~ 711 (717)
.+ ...-+..- ....+..+...-.+.++..+..+|+... +.-|||++..+..|.+++++...
T Consensus 243 ~f----~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~ 306 (637)
T COG4248 243 RF----AYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKK 306 (637)
T ss_pred ee----eechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhh
Confidence 00 00000000 0011112222344566778888888765 45799999999999999887654
No 491
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.85 E-value=4.2e-11 Score=126.88 Aligned_cols=127 Identities=32% Similarity=0.338 Sum_probs=59.3
Q ss_pred CCeEEecCccccCCCChhhhcccCCCeEEccCCcCcccCCccccCCCCCCeEEccCCCCCCCCcc-cccCCccccccccc
Q 005040 191 LRSLYLQSNKLSSSLPSSLWSLEYILRINLSSNSLKGTLPSNIQKLNVLIDLDLSRNQLSSDIPS-TIGTLKNLETLSLA 269 (717)
Q Consensus 191 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~l~~L~~L~l~ 269 (717)
|...+.++|.+. ..-..+.-++.|+.|+|++|+++.. +.+..++.|++|||++|.+.. +|. ...++. |+.|+++
T Consensus 166 L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~-vp~l~~~gc~-L~~L~lr 240 (1096)
T KOG1859|consen 166 LATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRH-VPQLSMVGCK-LQLLNLR 240 (1096)
T ss_pred HhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhcc-ccccchhhhh-heeeeec
Confidence 444444455444 3333444444555555555555422 244555555555555555543 222 122222 5555555
Q ss_pred CccccCCCCccccccCccceEeccCCCCCCC-CcccccccccccEEEccCCccccc
Q 005040 270 GNQFQGPIPESVGNLISLESLDFSNNNLSGK-IPKSLEALSHLKQFNVSHNRLEGE 324 (717)
Q Consensus 270 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~~~-~~~~~~~l~~L~~L~l~~N~l~~~ 324 (717)
+|-++. -..+.++.+|+.||+++|-|.+- .-..+..+..|+.|+|.|||+++.
T Consensus 241 nN~l~t--L~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~ 294 (1096)
T KOG1859|consen 241 NNALTT--LRGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCA 294 (1096)
T ss_pred ccHHHh--hhhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccC
Confidence 555542 12344555555555555554431 112234455556666666666553
No 492
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.82 E-value=4.2e-08 Score=91.96 Aligned_cols=125 Identities=23% Similarity=0.266 Sum_probs=81.7
Q ss_pred EEEEEEecCCCeEEEEEechhh--------------------------HHHHHHHHHHHHHHHhcCCC--ceeeEeeeee
Q 005040 442 SVYKGTLSDGTNVAIKIFNLQL--------------------------ERAFRSFDSECEILRNVRHR--NLLKILGSCS 493 (717)
Q Consensus 442 ~V~~~~~~~~~~vavK~~~~~~--------------------------~~~~~~~~~e~~~l~~l~hp--niv~~~~~~~ 493 (717)
.||.|...+|..+|||+.+... ........+|.+.|.++..- ++.+.+++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 4899998899999999875321 01123467899999999755 456666553
Q ss_pred cCCeeEEEEEccC--CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHH-HhhcCCCCCeEecCCCCCCeeeCCCCcEEEe
Q 005040 494 NLDFKALVLEFMP--NGSLEKWLYSHNYFLDILQRLNIMIDVGSALEY-LHHCHSSAPIIHCDLKPTNILLDENMVAHVS 570 (717)
Q Consensus 494 ~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~-LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~ 570 (717)
..++||||++ |..+..+.... ++......++.+++..+.. +| ..+++|||+.+.||+++++ .+.++
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~---~~~~~~~~~~~~il~~~~~~~~----~~givHGDLs~~NIlv~~~-~~~iI 148 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD---LSPEEPKELLEEILEEIIKMLH----KAGIVHGDLSEYNILVDDG-KVYII 148 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG---GGGSTHHHHHHHHHHHHHHHHH----CTTEEESS-STTSEEEETT-CEEE-
T ss_pred ---CCEEEEEecCCCccchhhHHhcc---ccchhHHHHHHHHHHHHHHHHH----hcCceecCCChhhEEeecc-eEEEE
Confidence 2389999998 54554433221 1123345567777775555 46 6799999999999999988 99999
Q ss_pred eecccccc
Q 005040 571 DFGISKLL 578 (717)
Q Consensus 571 Dfgl~~~~ 578 (717)
|||.+...
T Consensus 149 Df~qav~~ 156 (188)
T PF01163_consen 149 DFGQAVDS 156 (188)
T ss_dssp -GTTEEET
T ss_pred ecCcceec
Confidence 99988754
No 493
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.81 E-value=1.5e-07 Score=97.38 Aligned_cols=167 Identities=20% Similarity=0.217 Sum_probs=126.3
Q ss_pred cEEEEEEEec-CCCeEEEEEechhhHHHHHHHHHHHHHHHhcCCCceeeEeeeeec----CCeeEEEEEccCC-CCHHHH
Q 005040 440 FGSVYKGTLS-DGTNVAIKIFNLQLERAFRSFDSECEILRNVRHRNLLKILGSCSN----LDFKALVLEFMPN-GSLEKW 513 (717)
Q Consensus 440 ~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~----~~~~~lv~e~~~~-g~L~~~ 513 (717)
..+.|++... ||..|++|+++............-++.++++.|+|+|++.+++.. ...+++||+|.++ ++|.+.
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 4588999865 899999999954433332233456888999999999999998752 3467899999876 466654
Q ss_pred Hhh--------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccC
Q 005040 514 LYS--------------HNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLG 579 (717)
Q Consensus 514 l~~--------------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~ 579 (717)
--. .+...++...|.++.|+..||.++| +.|...+-|.+.+|+++.+.+++|+.-|....+.
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH----ssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH----SSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH----hcCceeecccHhHeEeeCcceEEEecccceeeec
Confidence 321 1334788999999999999999999 6789999999999999999999998877766554
Q ss_pred CCCCceeeeccccCccccCCCccCCCCcCcccchhhHHHHHHHHHhCCCC
Q 005040 580 EGEDSVIQTMTMATIGYMAPEYGSEGIVSTKCDVYSYGVLLMETFTEKKP 629 (717)
Q Consensus 580 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws~G~il~el~tg~~p 629 (717)
.... |-+.+ -.+-|.=.+|.+++.|.||..-
T Consensus 445 ~d~~----------------~~le~---~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 445 EDPT----------------EPLES---QQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred CCCC----------------cchhH---HhhhhHHHHHHHHHHHhhcccc
Confidence 3321 11111 2357999999999999999653
No 494
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.79 E-value=8.2e-08 Score=95.72 Aligned_cols=138 Identities=14% Similarity=0.079 Sum_probs=96.7
Q ss_pred ccccccEEEEEEEecCCCeEEEEEechhh-HH----------HHHHHHHHHHHHHhcCCCc--eeeEeeeeec-----CC
Q 005040 435 LGTGGFGSVYKGTLSDGTNVAIKIFNLQL-ER----------AFRSFDSECEILRNVRHRN--LLKILGSCSN-----LD 496 (717)
Q Consensus 435 lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~----------~~~~~~~e~~~l~~l~hpn--iv~~~~~~~~-----~~ 496 (717)
+-......|++... +|+.|.||...... .+ ....+.+|.+.+.++..-+ ....+++.+. ..
T Consensus 30 v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~ 108 (268)
T PRK15123 30 FRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATR 108 (268)
T ss_pred EecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccc
Confidence 33333345667666 57889999764322 11 1113678888888884332 2333444432 23
Q ss_pred eeEEEEEccCCC-CHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCC-------CCcE
Q 005040 497 FKALVLEFMPNG-SLEKWLYSH-NYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDE-------NMVA 567 (717)
Q Consensus 497 ~~~lv~e~~~~g-~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~-------~~~~ 567 (717)
..++|+|++++. +|.+++... ....+...+..++.+++..+.-|| ..||+|+|++++|||++. ++.+
T Consensus 109 ~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH----~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~ 184 (268)
T PRK15123 109 TSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMH----AAGINHRDCYICHFLLHLPFPGREEDLKL 184 (268)
T ss_pred eeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH----HCcCccCCCChhhEEEeccccCCCCCceE
Confidence 568999999876 899998642 223456677789999999999999 689999999999999985 4689
Q ss_pred EEeeeccccc
Q 005040 568 HVSDFGISKL 577 (717)
Q Consensus 568 kl~Dfgl~~~ 577 (717)
.++||+.+..
T Consensus 185 ~LIDl~r~~~ 194 (268)
T PRK15123 185 SVIDLHRAQI 194 (268)
T ss_pred EEEECCcccc
Confidence 9999998754
No 495
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.73 E-value=3.8e-10 Score=119.76 Aligned_cols=127 Identities=29% Similarity=0.298 Sum_probs=74.0
Q ss_pred CCCEEeccCCcCcccCCccccCCCCCCeEEecCccccCCCChhhhcccCCCeEEccCCcCcccCCccccCCCCCCeEEcc
Q 005040 166 RLNILNLSGNKLSGAIPQCLASLTSLRSLYLQSNKLSSSLPSSLWSLEYILRINLSSNSLKGTLPSNIQKLNVLIDLDLS 245 (717)
Q Consensus 166 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 245 (717)
.|.+.+.+.|.+. .....+.-++.|+.|+|++|+++.. +.+..++.|++|||++|.+....--...++. |+.|.|+
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lr 240 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLR 240 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhhh-heeeeec
Confidence 4566666666666 4445555566666667777766643 2566666666777777766632222222333 6666677
Q ss_pred CCCCCCCCcccccCCcccccccccCccccCCC-CccccccCccceEeccCCCCC
Q 005040 246 RNQLSSDIPSTIGTLKNLETLSLAGNQFQGPI-PESVGNLISLESLDFSNNNLS 298 (717)
Q Consensus 246 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~L~L~~N~~~ 298 (717)
+|.++.. ..+.++.+|+.||+++|-|.+.- -..++.+..|+.|+|.+|++-
T Consensus 241 nN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 241 NNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 6666632 23556666666777776665422 122345566666677777664
No 496
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.68 E-value=1.1e-09 Score=92.65 Aligned_cols=134 Identities=24% Similarity=0.290 Sum_probs=91.0
Q ss_pred CCCeEEecCccccCCCChhhh---cccCCCeEEccCCcCcccCCccccCCCCCCeEEccCCCCCCCCcccccCCcccccc
Q 005040 190 SLRSLYLQSNKLSSSLPSSLW---SLEYILRINLSSNSLKGTLPSNIQKLNVLIDLDLSRNQLSSDIPSTIGTLKNLETL 266 (717)
Q Consensus 190 ~L~~L~L~~N~l~~~~~~~~~---~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 266 (717)
.+..++|+.|++- .+++... ....|+.++|++|.+....+..-..++.++.|+|++|.|++ +|..+..++.|+.|
T Consensus 28 E~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neisd-vPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 28 ELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEISD-VPEELAAMPALRSL 105 (177)
T ss_pred Hhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhhh-chHHHhhhHHhhhc
Confidence 3556677777665 3344333 34456666788888875444444566678888888888884 77778888888888
Q ss_pred cccCccccCCCCccccccCccceEeccCCCCCCCCcccccccccccEEEccCCcccccccc
Q 005040 267 SLAGNQFQGPIPESVGNLISLESLDFSNNNLSGKIPKSLEALSHLKQFNVSHNRLEGEIPV 327 (717)
Q Consensus 267 ~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 327 (717)
++++|++. ..|..+..+.+|-.|+..+|.+. .+|..+-.-......++.+++|.+..+.
T Consensus 106 Nl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~ 164 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKK 164 (177)
T ss_pred ccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccccCcc
Confidence 88888887 67777777888888888888777 4444333333444556677777776664
No 497
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.68 E-value=5.3e-09 Score=100.06 Aligned_cols=79 Identities=16% Similarity=0.227 Sum_probs=43.3
Q ss_pred CCCCeEEccCCCCCCCCc-ccccCCcccccccccCccccCCC-CccccccCccceEeccCCCCCCCCcc------ccccc
Q 005040 237 NVLIDLDLSRNQLSSDIP-STIGTLKNLETLSLAGNQFQGPI-PESVGNLISLESLDFSNNNLSGKIPK------SLEAL 308 (717)
Q Consensus 237 ~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~L~L~~N~~~~~~~~------~~~~l 308 (717)
+++..+.+..|.+...-. ..+..++.+.-|+|+.|+|..-. .+++.+++.|..|.+++|++.+..-. .++.+
T Consensus 199 pnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~~err~llIaRL 278 (418)
T KOG2982|consen 199 PNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLRGGERRFLLIARL 278 (418)
T ss_pred ccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccccccCCcceEEEEeec
Confidence 445555555555543221 23344566666677777665321 24556667777777777776543221 24566
Q ss_pred ccccEEE
Q 005040 309 SHLKQFN 315 (717)
Q Consensus 309 ~~L~~L~ 315 (717)
++++.|+
T Consensus 279 ~~v~vLN 285 (418)
T KOG2982|consen 279 TKVQVLN 285 (418)
T ss_pred cceEEec
Confidence 7777654
No 498
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.66 E-value=1.9e-07 Score=89.62 Aligned_cols=135 Identities=22% Similarity=0.212 Sum_probs=95.7
Q ss_pred CCccccccccccEEEEEEEecCCCeEEEEEechhh----------------------HHHHHHHHHHHHHHHhcCCC--c
Q 005040 429 FNECNLLGTGGFGSVYKGTLSDGTNVAIKIFNLQL----------------------ERAFRSFDSECEILRNVRHR--N 484 (717)
Q Consensus 429 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~----------------------~~~~~~~~~e~~~l~~l~hp--n 484 (717)
..+...||-|.-+.||.|..+.|.++|||.=+... .-......+|.++|+.|... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 34567899999999999999999999999432110 11234567899999999655 6
Q ss_pred eeeEeeeeecCCeeEEEEEccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCC
Q 005040 485 LLKILGSCSNLDFKALVLEFMPNGSLEKWLYSHNYFLDILQRLNIMIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDEN 564 (717)
Q Consensus 485 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~ 564 (717)
+.+.+++ +...+|||+++|-.|...- ++......++..|++-+.-.- ..||||+|+.+-||+++++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r------~~~en~~~il~~il~~~~~~~----~~GiVHGDlSefNIlV~~d 238 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR------LDVENPDEILDKILEEVRKAY----RRGIVHGDLSEFNILVTED 238 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc------CcccCHHHHHHHHHHHHHHHH----HcCccccCCchheEEEecC
Confidence 6666654 4458999999986665421 122333334444444444443 3579999999999999999
Q ss_pred CcEEEeeeccccc
Q 005040 565 MVAHVSDFGISKL 577 (717)
Q Consensus 565 ~~~kl~Dfgl~~~ 577 (717)
|.+.++||--+..
T Consensus 239 g~~~vIDwPQ~v~ 251 (304)
T COG0478 239 GDIVVIDWPQAVP 251 (304)
T ss_pred CCEEEEeCccccc
Confidence 9999999975543
No 499
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.66 E-value=1e-08 Score=109.78 Aligned_cols=151 Identities=19% Similarity=0.268 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHhhcCCCCCeEecCCCCCCeeeCCCCcEEEeeeccccccCCCCCce-------eeeccccCccccCCCcc
Q 005040 530 MIDVGSALEYLHHCHSSAPIIHCDLKPTNILLDENMVAHVSDFGISKLLGEGEDSV-------IQTMTMATIGYMAPEYG 602 (717)
Q Consensus 530 ~~~i~~~l~~LH~~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~-------~~~~~~~t~~y~aPE~~ 602 (717)
+.+++.|+.|+|. +-++||++|.|++|.++.++..||+.|+++.-........ ..........|.|||++
T Consensus 105 l~~v~dgl~flh~---sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~ 181 (700)
T KOG2137|consen 105 LGNVADGLAFLHR---SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYL 181 (700)
T ss_pred hhcccchhhhhcc---CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhh
Confidence 3445699999996 6789999999999999999999999999987654422111 11112346679999999
Q ss_pred CCCCcCcccchhhHHHHHHHHHhCCCC-CCccccCcchHHHHHHhhCCCchhhhccccchhhhhhhhhhHHHHHHHHHHH
Q 005040 603 SEGIVSTKCDVYSYGVLLMETFTEKKP-TDEMFTGEMSLRRWVKESLPHRLTEVVDANLVREEQAFSDKMDCLFSIMDLA 681 (717)
Q Consensus 603 ~~~~~~~~~Dvws~G~il~el~tg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 681 (717)
.+...+.++|+||+|+++|.+..|..+ +.. ....... ..... ..+ . ..+......+.++.+-+
T Consensus 182 ~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a-~~~~~~~-~~~~~--~~~------~------~~~~~s~~~p~el~~~l 245 (700)
T KOG2137|consen 182 LGTTNTPASDVFSLGVLIYTIYNGGKSIIAA-NGGLLSY-SFSRN--LLN------A------GAFGYSNNLPSELRESL 245 (700)
T ss_pred ccccccccccceeeeeEEEEEecCCcchhhc-cCCcchh-hhhhc--ccc------c------ccccccccCcHHHHHHH
Confidence 998899999999999999999965554 332 1111111 10000 000 0 01111134567788999
Q ss_pred hhccCCCCCCCCCHHHHH
Q 005040 682 LDCCMDTPHKRIHMTDAA 699 (717)
Q Consensus 682 ~~cl~~~P~~Rpt~~ev~ 699 (717)
.+++..++..||++.++.
T Consensus 246 ~k~l~~~~~~rp~~~~l~ 263 (700)
T KOG2137|consen 246 KKLLNGDSAVRPTLDLLL 263 (700)
T ss_pred HHHhcCCcccCcchhhhh
Confidence 999999999999776654
No 500
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.49 E-value=2.5e-08 Score=95.58 Aligned_cols=187 Identities=22% Similarity=0.244 Sum_probs=99.9
Q ss_pred cCCCCEEeccCCcccc--cCCccccCCCCCCEEeccCCcCcccCCccccCCCCCCeEEecCcccc-CCCChhhhcccCCC
Q 005040 140 LQQLQGFYVPENNLQG--YVPHDLCHLERLNILNLSGNKLSGAIPQCLASLTSLRSLYLQSNKLS-SSLPSSLWSLEYIL 216 (717)
Q Consensus 140 l~~L~~L~l~~n~i~~--~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~ 216 (717)
.+.++.|+|.+|.|+. .+...+.+||.|++|+|+.|++...+...-..+.+|+.|-|.+..+. ......+..++.++
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vt 149 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVT 149 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhh
Confidence 4455666666666652 12223455666666666666665433222134456666666666554 22233445556666
Q ss_pred eEEccCCcCcccC--CccccCC-CCCCeEEccCCCCCC--CCcccccCCcccccccccCccccCCCC-ccccccCccceE
Q 005040 217 RINLSSNSLKGTL--PSNIQKL-NVLIDLDLSRNQLSS--DIPSTIGTLKNLETLSLAGNQFQGPIP-ESVGNLISLESL 290 (717)
Q Consensus 217 ~L~l~~N~l~~~~--~~~~~~l-~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L 290 (717)
.|.||.|.+.... .+..... +.++.|++..|.... ..-..-.-++++..+-+..|++..... ..+..++.+-.|
T Consensus 150 elHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~L 229 (418)
T KOG2982|consen 150 ELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPNVNSVFVCEGPLKTESSEKGSEPFPSLSCL 229 (418)
T ss_pred hhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcccchheeeecCcccchhhcccCCCCCcchhh
Confidence 6666666433110 0011111 123333333332210 000011235677788888888765443 234566777788
Q ss_pred eccCCCCCCC-CcccccccccccEEEccCCccccccc
Q 005040 291 DFSNNNLSGK-IPKSLEALSHLKQFNVSHNRLEGEIP 326 (717)
Q Consensus 291 ~L~~N~~~~~-~~~~~~~l~~L~~L~l~~N~l~~~~p 326 (717)
+|+.|+|..- --+.+.+++.|..|.+.+||+...+-
T Consensus 230 nL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~ 266 (418)
T KOG2982|consen 230 NLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLR 266 (418)
T ss_pred hhcccccccHHHHHHHcCCchhheeeccCCccccccc
Confidence 8888888642 23567788888888888888865443
Done!